BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016027
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/393 (54%), Positives = 298/393 (75%), Gaps = 1/393 (0%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L KA+EF+ AW L+ D++ E + VS DTF++LIRRYARAGMV+ AI FEFA
Sbjct: 141 VVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFAR 200
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK-RKELDQSWAPTVRVYNILLNGW 119
+ + V + L E+LLD+LCK+G V+ AS Y + +D +W P+VR++NILLNGW
Sbjct: 201 SYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGW 260
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
FRS+ +K AE+ W EM+ NV P VVTYGTL+EGYCR+RRV A+ +++EM+ +E N
Sbjct: 261 FRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINF 320
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+V+N +IDGL EAGR E GMMERF VCE GPT+VTY SLVK +CKAGDL GASKILKM
Sbjct: 321 MVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKM 380
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M++RG P+ TTYN+FF+YFSK K E+ MNLY K+IE+G++PDRLTYH++LK+LC++ K
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
L LA+QV+KEMK RG D DL T+TMLIHLLCR+ +EA EF++ +RRG++P Y+TFK
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSMELLDS 392
+++ + +GM+ +A++L ++MSS+P S +L ++
Sbjct: 501 IDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNT 533
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 188/370 (50%), Gaps = 22/370 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I +L + ++FD L+++ D S +TF+IL++R AG+ A+ F+ A
Sbjct: 111 IIDILGRVRQFDVVRQLIVEM-------DQTSPETFLILVKRLIAAGLTRQAVRAFDDAP 163
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
++N F LLD+LCK G K A F++RKE + +VY IL+ GW
Sbjct: 164 CF--LENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKE---EFGSDEKVYTILIAGWC 218
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL----------RRVDRAIRLVKEM 170
+ + + AE+F +EM + + PNVVTY L+ G CR R V A ++ EM
Sbjct: 219 KLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEM 278
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
R+ GIEP+ ++ V+ A + E M+ PT+ TYTS+VK C G L
Sbjct: 279 RQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRL 338
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
E A ++L+ M+ G PS TYN FF+ + AMNLYRKM P TY++L
Sbjct: 339 EEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVL 398
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
L K++ ++ ++K DLD+ T L+H LC K+ EA F +MI RG
Sbjct: 399 LGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGF 458
Query: 351 VPHYLTFKRL 360
+P LTF+ L
Sbjct: 459 LPQKLTFETL 468
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
+PT+ Y ++ +++AE M + ++P+ TY + Y + + A+
Sbjct: 319 SPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMN 378
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L ++M+ +P+ YN ++ + G+ E V + + E GP + +YTSLV G C
Sbjct: 379 LYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLC 438
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
+ A MI RGFLP T+ ++ + K+ L +K+ E T
Sbjct: 439 SKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESIT 494
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT--VRVYNILLNGWFRS--KNVKDAER 130
F +++D L GRV+ E+DQ+ T + V ++ G R + DA
Sbjct: 108 FNLIIDIL---GRVRQFDVVRQLIVEMDQTSPETFLILVKRLIAAGLTRQAVRAFDDAPC 164
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
F EN +V +G L++ C+ A+ + E RKE + VY +I G
Sbjct: 165 FL-----ENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNE-RKEEFGSDEKVYTILIAGWC 218
Query: 191 EAGRFEEVSGMMERFLV--CEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ R + M E+FLV E G P +VTY L+ G C+ L + +
Sbjct: 219 KLRRID----MAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFER-------- 266
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
V +A ++ +M + G PD ++ I+L + + K +L +
Sbjct: 267 -----------------NVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDK 309
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
K MK +G ++T T ++ LC + +EA E M+ G+ P T+ E+K
Sbjct: 310 MKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKG 369
Query: 367 R----GMTALAQKLCN 378
R G L +K+ N
Sbjct: 370 RKDANGAMNLYRKMKN 385
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 85 QGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
+GR A RK + P+ + YN+LL + ++ + W +++ P++
Sbjct: 368 KGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDL 427
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+Y +LV G C + A EM + G P + + T+ GL+++ +
Sbjct: 428 DSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNK 477
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 200/383 (52%), Gaps = 15/383 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K ++FD AW L+D + V +S +TF ILIRRY RAG+ A+ F
Sbjct: 157 MIDLSGKVRQFDLAW-HLIDLMKSRNVE--ISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V + F I++ +L ++ R A +F L + P V VY L+ GW
Sbjct: 214 DYGCVPD----KIAFSIVISNLSRKRRASEAQSFF---DSLKDRFEPDVIVYTNLVRGWC 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
R+ + +AE+ + EM+ + PNV TY +++ CR ++ RA + +M G PNAI
Sbjct: 267 RAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERF--LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+N ++ V+AGR E+V + + L CEP +TY L++ +C+ +LE A K+L
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD--TITYNFLIEAHCRDENLENAVKVLN 384
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI + + +T+N FRY K V A +Y KM+E+ P+ +TY+IL+++
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI-RRGLVPHYLTF 357
D+ +++ KEM + + +++T +L+ + C M ++ A F++M+ + L P +
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
+ + + ++ G ++L M
Sbjct: 505 EMVLAQLRRAGQLKKHEELVEKM 527
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
T+T L++ Y +AG A M G +P ++ S+ + +A + + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+ + PD + Y L++ C+ ++ A +V KEMK G + ++ T +++I LCR +
Sbjct: 248 -KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV---PRSME---L 389
A F DM+ G P+ +TF L K G T ++ N M + P ++ L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 390 LDSRCKD 396
+++ C+D
Sbjct: 367 IEAHCRD 373
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 19/388 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+K+L+K ++F + W L+ + E P + + FV+L++R+A A MV+ AI +
Sbjct: 153 MVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEVLD--- 207
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K F+ +F LLD+LCK G VK A++ F +++ + +R + LL GW
Sbjct: 208 --EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF---EDMRMRFPVNLRYFTSLLYGW 262
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M + P++V Y L+ GY ++ A L+++MR+ G EPNA
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 180 IVYNTVIDGLVEAGRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
Y +I L + R EE + MER+ E +VTYT+LV G+CK G ++ +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERY---ECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L MI +G +PS TY + K E+ + L KM + Y PD Y++++++ CK
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 439
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPHY 354
++ A+++ EM+ G +DT ++I+ L EAS F++M+ RGL V Y
Sbjct: 440 LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQY 499
Query: 355 LTFKRLNDEFKKRGMTALAQKLCNVMSS 382
T K L + K +A+ + + ++S
Sbjct: 500 GTLKLLLNTVLKDKKLEMAKDVWSCITS 527
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE----------------------------- 173
++ Y ++V+ ++R+ L++EMRKE
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 174 -------GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
G EP+ V+ ++D L + G ++ + + E + P + +TSL+ G+C+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFP-VNLRYFTSLLYGWCR 264
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A +L M GF P Y ++ GK+ DA +L R M G+ P+
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y +L++ LCK D+++ A++V EM+ C+ D+ T T L+ C+ K D+ +DMI
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 347 RRGLVPHYLTF 357
++GL+P LT+
Sbjct: 385 KKGLMPSELTY 395
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 206/396 (52%), Gaps = 20/396 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ +L+K ++F + W L+ + + P+ + + FV+L+RR+A A MV+ A+ +
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLD--- 191
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M K + +F LLD+LCK G VK AS+ F +++ + + P +R + LL GW
Sbjct: 192 --EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF---EDMREKFPPNLRYFTSLLYGW 246
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R + +A+ ++M++ + P++V + L+ GY ++ A L+ +MRK G EPN
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 180 IVYNTVIDGLVEA-GRFEEVSGM---MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
Y +I L R +E + MER+ CE +VTYT+L+ G+CK G ++
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERY-GCEA--DIVTYTALISGFCKWGMIDKGYS 363
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+L M +G +PS TY K + E+ + L KM G PD L Y++++++ C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL--VPH 353
K ++ A+++ EM+ G +DT ++I+ EA F++M+ RG+ P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
Y T K L + + +A+ + + +S+ S EL
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCEL 519
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 34 DTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASE 93
DTFVI+I + G + A F+ + + G + LL++L + +++ A +
Sbjct: 448 DTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT--LKSLLNNLVRDDKLEMAKD 505
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ S V + I ++ + +VK+A + L+M + ++ P TY L++G
Sbjct: 506 VWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
Query: 154 YCRL 157
+L
Sbjct: 566 LNKL 569
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 40/370 (10%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
+ + F ++++ Y+R +++ A+ A F G + +LD+ + R
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQ----AHGFMPGVLSYNAVLDATIRSKRNI 186
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
+ +E K L+ +P V YNIL+ G+ + N+ A + +M + PNVVTY T
Sbjct: 187 SFAENVFKEM-LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF---- 205
L++GYC+LR++D +L++ M +G+EPN I YN VI+GL GR +EVS ++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 206 ----------LV---CEPG------------------PTMVTYTSLVKGYCKAGDLEGAS 234
L+ C+ G P+++TYTSL+ CKAG++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+ L M RG P+ TY FS+ G + +A + R+M ++G++P +TY+ L+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
C K++ AI V ++MK +G D+ + + ++ CR Y DEA +M+ +G+ P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 355 LTFKRLNDEF 364
+T+ L F
Sbjct: 486 ITYSSLIQGF 495
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILIR + AG ++ A+ F+ + N + + L+D CK ++ +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT----YNTLIDGYCKLRKIDDGFKL 262
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
R + P + YN+++NG R +K+ EM + + + VTY TL++GY
Sbjct: 263 L--RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C+ +A+ + EM + G+ P+ I Y ++I + +AG +++ V P
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
TYT+LV G+ + G + A ++L+ M GF PS TYN GK+EDA+ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M E G +PD ++Y +L C+ +D A++V +EM +G D T + LI C +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
EA +E+M+R GL P T+ L + + G A +L N M
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 189/404 (46%), Gaps = 27/404 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK K F A + + + P + T+ LI +AG + A+ EF +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVI---TYTSLIHSMCKAGNMNRAM---EFLD 369
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ V+ + L+D ++G + A Y R+ D ++P+V YN L+NG
Sbjct: 370 QMR-VRGLCPNERTYTTLVDGFSQKGYMNEA--YRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ ++DA +M+++ ++P+VV+Y T++ G+CR VD A+R+ +EM ++GI+P+ I
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+++I G E R +E + E L P TYT+L+ YC GDLE A ++ M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL--------- 291
+ +G LP TY+ +K + +A L K+ P +TYH L+
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 292 ------KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
K C + + A QV + M + D ++IH CR +A +++M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMEL 389
++ G + H +T L K G +L +V+ V RS EL
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGK---VNELNSVIVHVLRSCEL 707
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LC++GR+K S + + ++ YN L+ G+ + N A E
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNR--RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+V+TY +L+ C+ ++RA+ + +MR G+ PN Y T++DG + G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ P++VTY +L+ G+C G +E A +L+ M +G P +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + V++A+ + R+M+E G PD +TY L++ C++ + A + +EM G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D T T LI+ C ++A +M+ +G++P +T+ L + K+ T A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 375 KL 376
+L
Sbjct: 576 RL 577
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 13/316 (4%)
Query: 71 GASLFEILLDSL----CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
G SL E+ ++L CK+G A + L P+V Y L++ ++ N+
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQA--LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
A F +MR + PN TY TLV+G+ + ++ A R+++EM G P+ + YN +I
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G G+ E+ ++E P +V+Y++++ G+C++ D++ A ++ + M+ +G
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P TY+ + F + + ++A +LY +M+ G PD TY L+ C E L+ A+Q+
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL-----N 361
EM +G D+ T ++LI+ L + + EA + VP +T+ L N
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 362 DEFKKRGMTALAQKLC 377
EFK + +L + C
Sbjct: 603 IEFK--SVVSLIKGFC 616
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR---FEEVSGMME 203
+ +V+ Y RL +D+A+ +V + G P + YN V+D + + R F E + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE--NVFK 194
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
L + P + TY L++G+C AG+++ A + M ++G LP+ TYN + K
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K++D L R M G P+ ++Y++++ LC+E ++ V EM RG +D T
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
LI C+ F +A +M+R GL P +T+ T+L +C ++
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY------------TSLIHSMCKA-GNM 361
Query: 384 PRSMELLD 391
R+ME LD
Sbjct: 362 NRAMEFLD 369
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 58/370 (15%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L+ +++ G + A N+ F + L++ C G+++ A
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMND----NGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
KE + +P V Y+ +L+G+ RS +V +A R EM ++ + P+ +TY +L++G+
Sbjct: 438 LEDMKE--KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 155 CRLRR-----------------------------------VDRAIRLVKEMRKEGIEPNA 179
C RR +++A++L EM ++G+ P+
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTY---------------TSLVKGY 224
+ Y+ +I+GL + R E ++ + E P+ VTY SL+KG+
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
C G + A ++ + M+ + P T YN + G + A LY++M++SG+
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI-DLDTSTMLIHLLCRMYKFDEASAEFE 343
+T L+K L KE K++ V + R C++ + + + +L+ + R D
Sbjct: 676 VTVIALVKALHKEGKVNELNSVIVHV-LRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 344 DMIRRGLVPH 353
+M + G +P+
Sbjct: 735 EMAKDGFLPN 744
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 42/404 (10%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-----------------PDFVSKDTFVILIRRY 43
MI +L K K F +A LLDK+ E+ P+ VS F L+ Y
Sbjct: 86 MILILTKHKHFKTAH-QLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSH-VFSWLMIYY 143
Query: 44 ARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ 103
A+AGM+ +I FE + + + + +LL+SL KQ + F K +L
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACT----VLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 104 SWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRA 163
+ VYN+L++ +S + + AE+ EM ++ V P++ TY TL+ YC+ A
Sbjct: 200 --VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 164 IRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKG 223
+ + M + G+ PN + YN+ I G GR E + + R + + VTYT+L+ G
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDG 316
Query: 224 YCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
YC+ D++ A ++ ++M SRGF P TYN R + G++ +A L +M PD
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376
Query: 284 RLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFE 343
+T + L+ CK + + A++V K+M G +D+ + LIH C++ + + A E
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF 436
Query: 344 DMIRRGLVPHYLTFKRLND----------------EFKKRGMTA 371
MI +G P Y T+ L D EF+KRG+ A
Sbjct: 437 SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 1/275 (0%)
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
AP + YN ++G+ R +++A R + E+ K++VT N VTY TL++GYCR+ +D A+R
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L + M G P + YN+++ L E GR E + ++ + P +T +L+ YC
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
K D+ A K+ K MI G +Y F K ++E+A MIE G++P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ ++K D ++ +E + RG D+ LI +C++ + D A FE M
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESM 508
Query: 346 IRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++GLV + F + + + G A L +VM
Sbjct: 509 EKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
Y + ++ +I + +++R G++P+ +++ LV+ + V + ++ +
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVAN 202
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ Y LV K+GD E A K+L M +G P TYN + K +A+++
Sbjct: 203 IHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQD 262
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M SG P+ +TY+ + +E ++ A ++ +E+K + T T LI CRM
Sbjct: 263 RMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMN 321
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
DEA E M RG P +T+ + + + G A +L MS
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%)
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+P ++ L+ Y KAG + + + + + S G P K +
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+++KM++ G + Y++L+ K + A ++ EM+ +G D+ T LI +
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 329 LCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C+ EA + + M R G+ P+ +T+ F + G A +L
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 17/380 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L K K+F W L+ D + +SK+TF ++ RRYARA V+ AI F
Sbjct: 134 LIESLGKIKQFKLIWSLVDD----MKAKKLLSKETFALISRRYARARKVKEAIGAFHKME 189
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
F +S F +LD+L K V A + F K K+ + + P ++ Y ILL GW
Sbjct: 190 EF----GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK--KRFEPDIKSYTILLEGWG 243
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ + EM+ E P+VV YG ++ +C+ ++ + AIR EM + +P+
Sbjct: 244 QELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
++ ++I+GL + + ER TY +LV YC + +E A K + M
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY+ + + + ++A +Y+ M P TY I++++ C +++L
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D+AI++ EMK +G + + LI LC K DEA F +M+ G+ P F RL
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Query: 361 N----DEFKKRGMTALAQKL 376
DE +K +T L K+
Sbjct: 481 KQTLLDEGRKDKVTDLVVKM 500
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 4/312 (1%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+L E +L L G V A S + K E + + T YN L+ + K K
Sbjct: 95 ALIEEVLKKLSNAG-VLALSVF--KWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLV 151
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M+ + + T+ + Y R R+V AI +M + G + + +N ++D L ++
Sbjct: 152 DDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 210
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ + ++ P + +YT L++G+ + +L ++ + M GF P Y
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
K K E+A+ + +M + P + L+ L E KL+ A++ + K
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 330
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
G ++ T L+ C + ++A ++M +G+ P+ T+ + + +
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 373 AQKLCNVMSSVP 384
A ++ MS P
Sbjct: 391 AYEVYQTMSCEP 402
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 186/363 (51%), Gaps = 18/363 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ AK +++ W D I ++ +TF I++R+YARA V+ AI+ F
Sbjct: 140 MIESTAKIRQYKLMW----DLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
D+ N + F LL +LCK V+ A E F ++ + P + Y+ILL GW
Sbjct: 196 KYDLPPNLVA----FNGLLSALCKSKNVRKAQEVFENMRD---RFTPDSKTYSILLEGWG 248
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ N+ A + EM P++VTY +V+ C+ RVD A+ +V+ M +P
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYTSLVKGYCKAGDLEGASKIL 237
+Y+ ++ R EE ++ FL E + + SL+ +CKA ++ ++L
Sbjct: 309 IYSVLVHTYGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
K M S+G P+ + N R+ + G+ ++A +++RKMI+ PD TY +++K+ C++
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEK 424
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+++ A +V K M+ +G + T ++LI+ LC +A E+MI G+ P +TF
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Query: 358 KRL 360
RL
Sbjct: 485 GRL 487
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 7/230 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ I++D LCK GRV E + +D S PT +Y++L++ + +++A +L
Sbjct: 275 YSIMVDILCKAGRV---DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFL 331
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + +V + +L+ +C+ R+ R++KEM+ +G+ PN+ N ++ L+E G
Sbjct: 332 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 194 RFEEVSGMMERFL-VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+E + + + VCEP TYT ++K +C+ ++E A K+ K M +G PS T+
Sbjct: 392 EKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
+ + + A L +MIE G P +T+ L ++L KE++ D+
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + E + + +VR Y++++ + + K MRK+ + NV T+ ++ Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKY 178
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF----EEVSGMMERFLVCEP 210
R ++VD AI M K + PN + +N ++ L ++ E M +RF
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF----- 233
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P TY+ L++G+ K +L A ++ + MI G P TY+ K G+V++A+
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ R M S P Y +L+ E++L+ A+ EM+ G D+ LI C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 331 RMYKFDEASAEFEDMIRRGLVPH 353
+ + ++M +G+ P+
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPN 376
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 51/249 (20%)
Query: 1 MIKVLAKAKEFDSAWCLL--LDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTF 56
M+ +L KA D A ++ +D P TF+ +L+ Y +E A+ TF
Sbjct: 278 MVDILCKAGRVDEALGIVRSMD-------PSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 57 EFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASE---------------------- 93
L+M ++ + ++F L+ + CK R+K
Sbjct: 331 -----LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 94 YFHKRKELDQSW----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ +R E D+++ P Y +++ + K ++ A++ W MRK+ V P+
Sbjct: 386 HLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
+ T+ L+ G C R +A L++EM + GI P+ + + + L++ R + + + E
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 505
Query: 204 RF--LVCEP 210
+ LV EP
Sbjct: 506 KMNVLVNEP 514
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 175/379 (46%), Gaps = 12/379 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
++ + + E + + L + + VPD + T LIR + R G A E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTT---LIRGFCRLGKTRKAAKILEILEG 165
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
V + + + +++ CK G + A + S +P V YN +L
Sbjct: 166 SGAVPDVIT----YNVMISGYCKAGEINNALSVLDR-----MSVSPDVVTYNTILRSLCD 216
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S +K A M + + P+V+TY L+E CR V A++L+ EMR G P+ +
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN +++G+ + GR +E + P ++T+ +++ C G A K+L M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
+GF PS T+N + + G + A+++ KM + G P+ L+Y+ LL CKE K+D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
AI+ + M RGC D+ T ++ LC+ K ++A + +G P +T+ +
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 362 DEFKKRGMTALAQKLCNVM 380
D K G T A KL + M
Sbjct: 457 DGLAKAGKTGKAIKLLDEM 475
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 14/347 (4%)
Query: 23 GGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE-FANNLDMVKNFDSGASLFEILLDS 81
G VPD + T+ ++I Y +AG + A+ + + + D+V + +L S
Sbjct: 165 GSGAVPDVI---TYNVMISGYCKAGEINNALSVLDRMSVSPDVVT--------YNTILRS 213
Query: 82 LCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVT 141
LC G++K A E + L + P V Y IL+ R V A + EMR T
Sbjct: 214 LCDSGKLKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 142 PNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGM 201
P+VVTY LV G C+ R+D AI+ + +M G +PN I +N ++ + GR+ + +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 202 MERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSK 261
+ L P++VT+ L+ C+ G L A IL+ M G P+ +YN F K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 262 FGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDT 321
K++ A+ +M+ G PD +TY+ +L LCK+ K++ A+++ ++ +GC L T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 322 STMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+I L + K +A ++M + L P +T+ L + G
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + T+ ILI R V A+ + + + + + +L++ +CK+GR
Sbjct: 237 PDVI---TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT----YNVLVNGICKEGR 289
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A ++ + P V +NI+L + DAE+ +M ++ +P+VVT+
Sbjct: 290 LDEAIKFLNDMPS--SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L+ CR + RAI ++++M + G +PN++ YN ++ G + + + +ER +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY +++ CK G +E A +IL + S+G P TYN +K GK
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A+ L +M PD +TY L+ L +E K+D AI+ E + G + T ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LC+ + D A MI RG P+ ++ L + GM A +L N
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
PD V T+ +L+ + G ++ AI +F N++ I+L S+C G
Sbjct: 271 TPDVV---TYNVLVNGICKEGRLDEAI---KFLNDMP-SSGCQPNVITHNIILRSMCSTG 323
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A + L + ++P+V +NIL+N R + A +M + PN ++
Sbjct: 324 RWMDAEKLLADM--LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y L+ G+C+ +++DRAI ++ M G P+ + YNT++ L + G+ E+ ++ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P ++TY +++ G KAG A K+L M ++ P TY+ S+ GKV+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A+ + + G P+ +T++ ++ LCK + D AI M RGC + + T+LI
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLV 351
L EA ++ +GL+
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLM 586
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMIS 242
N + +V G EE +E + P ++ T+L++G+C+ G A+KIL+++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 243 RGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL 302
G +P TYN + K G++ +A+++ +M +PD +TY+ +L+ LC KL
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 303 AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
A++V M R C D+ T T+LI CR A ++M RG P +T+ L +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 363 EFKKRGMTALAQKLCNVMSS 382
K G A K N M S
Sbjct: 283 GICKEGRLDEAIKFLNDMPS 302
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 165/315 (52%), Gaps = 2/315 (0%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
++ +F LL+ LC + RV A E + E+ PT+ N L+NG + V D
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK--PTLITLNTLVNGLCLNGKVSD 211
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A M + PN VTYG ++ C+ + A+ L+++M + I+ +A+ Y+ +ID
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL + G + + + ++TY +L+ G+C AG + +K+L+ MI R P
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ T++ F K GK+ +A L ++M++ G P+ +TY+ L+ CKE++L+ AIQ+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
M +GCD D+ T +LI+ C+ + D+ F +M RG++ + +T+ L F +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 368 GMTALAQKLCNVMSS 382
G +A+KL M S
Sbjct: 452 GKLEVAKKLFQEMVS 466
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 149/273 (54%), Gaps = 2/273 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N A + I++D LCK G + A F++ + + + + YN L+ G+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI--KGFKADIITYNTLIGGFCNAGRW 314
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + +M K ++PNVVT+ L++ + + ++ A +L+KEM + GI PN I YN++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + R EE M++ + P ++T+ L+ GYCKA ++ ++ + M RG
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ + TYN + F + GK+E A L+++M+ PD ++Y ILL LC +L+ A++
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
+ +++ ++D+ ++IH +C K D+A
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC G+V A + E + P Y +LN +S A +M +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVE--TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ + V Y +++G C+ +D A L EM +G + + I YNT+I G AGR+++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ ++ + + P +VT++ L+ + K G L A ++LK M+ RG P+ TYN
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K ++E+A+ + MI G PD +T++IL+ CK +++D +++ +EM RG
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+ T L+ C+ K + A F++M+ R + P +++K L D G
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 161/325 (49%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++ +K F + + L+ C GR ++
Sbjct: 266 YSIIIDGLCKDGSLDNA---FNLFNEME-IKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + +P V +++L++ + + +++A++ EM + + PN +TY +L++G+C
Sbjct: 322 --RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ R++ AI++V M +G +P+ + +N +I+G +A R ++ + + V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +LV+G+C++G LE A K+ + M+SR P +Y G++E A+ ++ K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y I++ +C K+D A + + +G +D ++I LCR
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
+A F M G P LT+ L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNIL 584
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV +N L + ++K + +M + + ++ T ++ +CR R++ A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EP+ +++NT+++GL R E +++R + PT++T +LV G C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ GF P+ TY K G+ AM L RKM E D +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ LD A + EM+ +G D+ T LI C ++D+ + DMI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
+R + P+ +TF L D F K G A +L M P ++ L+D CK+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 165/366 (45%), Gaps = 48/366 (13%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
+I L K D+A+ L + +I G + D ++ +T + G A W
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKA-DIITYNTLI--------GGFCNAGRWDDGAK 319
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
DM+K F +L+DS K+G+++ A + ++ + + AP YN L++G
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL--KEMMQRGIAPNTITYNSLIDG 377
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ + +++A + M + P+++T+ L+ GYC+ R+D + L +EM G+ N
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI-- 236
+ YNT++ G ++G+ E + + + P +V+Y L+ G C G+LE A +I
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 237 ------------LKMMISRGF---------------LP------SPTTYNYFFRYFSKFG 263
+ M+I G LP YN +
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+ A L+RKM E G+ PD LTY+IL++ +D A ++ +EMK G D+ T
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 324 MLIHLL 329
M+I++L
Sbjct: 618 MVINML 623
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT++ + L K E + K M S+G S T + F + K+ A
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+++ GY PD + ++ LL LC E ++ A+++ M G L T L++ L
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC------NVMSSV 383
C K +A + M+ G P+ +T+ + + K G TALA +L N+
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 384 PRSMELLDSRCKD 396
+ ++D CKD
Sbjct: 264 VKYSIIIDGLCKD 276
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA++L+R MI+S P + ++ L + K + +L + + K+M+ +G + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I+ CR K A + +++ G P + F L
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
+PD V + LI + + G + AA F ++ D+ + + + ++ C+ G
Sbjct: 348 LPDTV---VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT----YTAIISGFCQIG 400
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A + FH+ + P + L+NG+ ++ ++KDA R M + +PNVVT
Sbjct: 401 DMVEAGKLFHEM--FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL++G C+ +D A L+ EM K G++PN YN++++GL ++G EE ++ F
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
VTYT+L+ YCK+G+++ A +ILK M+ +G P+ T+N F G +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
D L M+ G P+ T++ L+K C + L A + K+M RG D T L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
C+ EA F++M +G T+ L F KR
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 184/366 (50%), Gaps = 14/366 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
LLL ++ G+ PD +S T ++ Y R G ++ E K + ++
Sbjct: 269 LLLMELKGY-TPDVISYST---VVNGYCRFGELDKVWKLIEVMKR----KGLKPNSYIYG 320
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ LC+ ++ A E F + + Q P VY L++G+ + +++ A +F+ EM
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
++TP+V+TY ++ G+C++ + A +L EM +G+EP+++ + +I+G +AG +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
+ + + P +VTYT+L+ G CK GDL+ A+++L M G P+ TYN
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G +E+A+ L + +G D +TY L+ CK ++D A ++ KEM +G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR----GMTAL 372
+ T +L++ C ++ M+ +G+ P+ TF L ++ R TA+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 373 AQKLCN 378
+ +C+
Sbjct: 619 YKDMCS 624
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 11/355 (3%)
Query: 47 GMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWA 106
G++ A FE N +V + DS +++ L C + A F + E+ W
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDS-CNVYLTRLSKDCY--KTATAIIVFREFPEVGVCW- 244
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
V YNI+++ + +K+A L M + TP+V++Y T+V GYCR +D+ +L
Sbjct: 245 -NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++ M+++G++PN+ +Y ++I L + E + P V YT+L+ G+CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
GD+ ASK M SR P TY F + G + +A L+ +M G PD +T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ CK + A +V M GC ++ T T LI LC+ D A+ +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME------LLDSRCK 395
+ GL P+ T+ + + K G A KL + + + L+D+ CK
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 13/338 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQ 85
PD + T+ +I + + G MVEA E K + + F L++ CK
Sbjct: 383 TPDVL---TYTAIISGFCQIGDMVEAGKLFHEM-----FCKGLEPDSVTFTELINGYCKA 434
Query: 86 GRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNV 144
G +K A F + Q+ +P V Y L++G + ++ A EM K + PN+
Sbjct: 435 GHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMER 204
TY ++V G C+ ++ A++LV E G+ + + Y T++D ++G ++ +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 205 FLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGK 264
L PT+VT+ L+ G+C G LE K+L M+++G P+ TT+N + +
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 265 VEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTM 324
++ A +Y+ M G PD TY L+K CK + A + +EMK +G + + T ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 325 LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND 362
LI + KF EA F+ M R GL F +D
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 151/339 (44%), Gaps = 33/339 (9%)
Query: 75 FEILLDSLCKQGRVKAASEY----------------------FHKRKELDQSWA------ 106
+ I++ +C+ GR+K A + + ELD+ W
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 107 -----PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
P +Y ++ R + +AE + EM ++ + P+ V Y TL++G+C+ +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A + EM I P+ + Y +I G + G E + P VT+T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYCKAG ++ A ++ MI G P+ TY K G ++ A L +M + G
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
P+ TY+ ++ LCK ++ A+++ E + G + D T T L+ C+ + D+A
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++M+ +GL P +TF L + F GM +KL N M
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE-DKLDLAIQVS 307
P ++ FF+ FG + +A ++ KM+ G + ++ L L K+ K AI V
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+E G ++ + ++IH +C++ + EA M +G P +++ + + + +
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 294
Query: 368 GMTALAQKLCNVM 380
G KL VM
Sbjct: 295 GELDKVWKLIEVM 307
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 40/203 (19%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ K+ E D A +L + +G P V TF +L+ + GM+E E
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIV---TFNVLMNGFCLHGMLEDG----EKLL 584
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFH----------------------KR 98
N + K A+ F L+ C + +KAA+ + K
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 99 KELDQSW-----------APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ + ++W + +V Y++L+ G+ + K +A + +MR+E + + +
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Query: 148 GTLVEGYCRLRRVDRAIRLVKEM 170
+ + +R D + + E+
Sbjct: 705 DFFSDTKYKGKRPDTIVDPIDEI 727
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 162/296 (54%), Gaps = 4/296 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++DSLCK RV A ++F KE+++ P V Y L+NG S DA R
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFF---KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M K+ +TPNV+TY L++ + + +V A L +EM + I+P+ + Y+++I+GL
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R +E + M + + +V+Y +L+ G+CKA +E K+ + M RG + + TYN
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F + G V+ A + +M G +PD TY+ILL LC +L+ A+ + ++M+ R
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
D+D+ T T +I +C+ K +EA + F + +GL P +T+ + +G+
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 137/269 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
+NI++N + V A +M K P+ VT G+LV G+CR RV A+ LV +M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G +P+ + YN +ID L + R + + P +VTYT+LV G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++L MI + P+ TY+ F K GKV +A L+ +M+ PD +TY L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC D++D A Q+ M +GC D+ + LI+ C+ + ++ F +M +RGLV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +T+ L F + G AQ+ + M
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 9/317 (2%)
Query: 47 GMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSW 105
G+ ++ W+ DM+K + LLD+ K G+V A E F + + S
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM--SI 291
Query: 106 APTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIR 165
P + Y+ L+NG + +A + + M + +VV+Y TL+ G+C+ +RV+ ++
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 166 LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC 225
L +EM + G+ N + YNT+I G +AG ++ + P + TY L+ G C
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 226 KAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G+LE A I + M R TY R K GKVE+A +L+ + G PD +
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRG-----CDIDLDTSTMLIHLLCRMYKFDEASA 340
TY ++ LC + L + +MK G C + T+ L+ +M A +
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531
Query: 341 EFEDMIRRGLVPHYLTF 357
+D I+ G+ L+
Sbjct: 532 LLKD-IKSGVCKKALSL 547
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 156 RLR--RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
RLR +++ AI L +M K P+ + +N ++ +V+ +++ V + ++ V
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+ T+ ++ +C + A IL M+ G+ P T F + +V DA++L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
KM+E GY PD + Y+ ++ LCK +++ A KE++ +G ++ T T L++ LC
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +A+ DMI++ + P+ +T+ L D F K G A++L
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + K +M + ++ T+ ++ +C +V A+ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + ++++G R + ++++ + P +V Y +++ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ A K + +G P+ TY + DA L MI+ TP+ +T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y LL K K+ A ++ +EM D D+ T + LI+ LC + DEA+ F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G + +++ L + F K KL MS
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 179/373 (47%), Gaps = 19/373 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVI-LIRRYARAGMVEAAIWTFEFA 59
+++VL K + LL I +P+ + + F+ L +R G V E
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
D++ + L+ LCK + + A Y K +++ P YN L+ G+
Sbjct: 282 PKPDVIT--------YNNLIYGLCKNSKFQEAEVYLGKM--VNEGLEPDSYTYNTLIAGY 331
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ V+ AER + P+ TY +L++G C +RA+ L E +GI+PN
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 180 IVYNTVIDGLVEAGRFEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
I+YNT+I GL G E + M E+ L+ P + T+ LV G CK G + A
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI----PEVQTFNILVNGLCKMGCVSDADG 447
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
++K+MIS+G+ P T+N +S K+E+A+ + M+++G PD TY+ LL LC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
K K + ++ K M +GC +L T +L+ LCR K DEA E+M + + P +
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 356 TFKRLNDEFKKRG 368
TF L D F K G
Sbjct: 568 TFGTLIDGFCKNG 580
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 12/355 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMV-EAAIWTFEFA 59
+I L E + A L + +G P+ + +T LI+ + GM+ EAA + A
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNT---LIKGLSNQGMILEAA----QLA 414
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + K F IL++ LCK G V A + + + + P + +NIL++G+
Sbjct: 415 NEMSE-KGLIPEVQTFNILVNGLCKMGCVSDADGLV--KVMISKGYFPDIFTFNILIHGY 471
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+++A M V P+V TY +L+ G C+ + + + K M ++G PN
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+N +++ L + +E G++E P VT+ +L+ G+CK GDL+GA + +
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 240 MISRGFLPSPT-TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
M + S T TYN F++ V A L+++M++ PD TY +++ CK
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
++L + EM G L T +I+ LC + EA+ M+++GLVP
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 10/377 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K +F A L + PD + +T LI Y + GMV+ A A
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT---LIAGYCKGGMVQLAERIVGDA- 347
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ F + L+D LC +G A F++ L + P V +YN L+ G
Sbjct: 348 ---VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE--ALGKGIKPNVILYNTLIKGLS 402
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ +A + EM ++ + P V T+ LV G C++ V A LVK M +G P+
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+N +I G + E +++ L P + TY SL+ G CK E + K M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ +G P+ T+N ++ K+++A+ L +M PD +T+ L+ CK L
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 301 DLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + ++M + T ++IH A F++M+ R L P T++
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 360 LNDEFKKRGMTALAQKL 376
+ D F K G L K
Sbjct: 643 MVDGFCKTGNVNLGYKF 659
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
++G+V+ A F + D PTV YN +++ S A + ++ MR +TP+
Sbjct: 88 RKGKVQEAVNVFERMDFYD--CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMME 203
V ++ ++ +C+ R A+RL+ M +G E N + Y TV+ G E E +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 204 RFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFG 263
+ L + T+ L++ CK GD++ K+L +I RG LP+ TYN F + + G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
+++ A+ + +IE G PD +TY+ L+ LCK K A +M G + D T
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
LI C+ A D + G VP T++ L D G T A L N
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 132/262 (50%)
Query: 99 KELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLR 158
K L + + +N LL + +VK+ E+ ++ K V PN+ TY ++G C+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+D A+R+V + ++G +P+ I YN +I GL + +F+E + + + P TY
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+L+ GYCK G ++ A +I+ + GF+P TY G+ A+ L+ + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G P+ + Y+ L+K L + + A Q++ EM +G ++ T +L++ LC+M +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 339 SAEFEDMIRRGLVPHYLTFKRL 360
+ MI +G P TF L
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL 467
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 172/420 (40%), Gaps = 49/420 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLD---KIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
+I+ L +F++ +L+D +G H + + +V ++ Y R G V+ A+ FE
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRENVGNHML-----EGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+ D S ++ +L+DS G A + + + + D+ P V + I +
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDS----GYFDQAHKVYMRMR--DRGITPDVYSFTIRMK 154
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY----------------------- 154
+ ++ A R M + NVV Y T+V G+
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 155 ------------CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
C+ V +L+ ++ K G+ PN YN I GL + G + M+
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P P ++TY +L+ G CK + A L M++ G P TYN + K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
G V+ A + + +G+ PD+ TY L+ LC E + + A+ + E +G ++
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
LI L EA+ +M +GL+P TF L + K G + A L VM S
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 14/350 (4%)
Query: 35 TFVILIRRYARAGMVEAA----IWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKA 90
+F ILI+ AG +E + I EF F ++ L+D CK+G ++
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFG--------FSPNVVIYTTLIDGCCKKGEIEK 216
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A + F + +L R Y +L+NG F++ K + +M+++ V PN+ TY +
Sbjct: 217 AKDLFFEMGKL--GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+ C+ R A ++ EMR+ G+ N + YNT+I GL + E + ++++
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P ++TY +L+ G+C G L A + + + SRG PS TYN F + G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
+ ++M E G P ++TY IL+ + D ++ AIQ+ M+ G D+ T ++LIH C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ +EAS F+ M+ + P+ + + + + K G + A KL M
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +LI + G+ + +E + N + + +++ LCK GR K A +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT----YNCVMNQLCKDGRTKDAFQV 290
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
F + +E + + + YN L+ G R + +A + +M+ + + PN++TY TL++G+
Sbjct: 291 FDEMRE--RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
C + ++ +A+ L ++++ G+ P+ + YN ++ G G + M++ P+
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTYT L+ + ++ ++E A ++ M G +P TY+ F G++ +A L++
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E P+ + Y+ ++ CKE A+++ KEM+ + ++ + +I +LC+ K
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 335 FDEASAEFEDMIRRGLVP 352
EA E MI G+ P
Sbjct: 529 SKEAERLVEKMIDSGIDP 546
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+E++++S + + + YF++ +D + P +N LL S + F+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEM--VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN 153
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
E K V +V ++G L++G C ++++ L+ E+ + G
Sbjct: 154 E-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS----------------- 195
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
P +V YT+L+ G CK G++E A + M G + + TY
Sbjct: 196 ------------------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G + +Y KM E G P+ TY+ ++ LCK+ + A QV EM+ R
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ T LI LCR K +EA+ + M G+ P+ +T+ L D F G A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 374 QKLCNVMSS 382
LC + S
Sbjct: 358 LSLCRDLKS 366
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ C++G A++ + +E + P+ Y IL++ + RS N++ A + L
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEE--RGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P+V TY L+ G+C +++ A RL K M ++ EPN ++YNT+I
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI-------- 485
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
GYCK G A K+LK M + P+ +Y Y
Sbjct: 486 ---------------------------LGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPD 283
K K ++A L KMI+SG P
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
SK T+ ILI +AR+ +E AI L +V + + + +L+ C +G++ A
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT----YSVLIHGFCIKGQMNEA 462
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
S F + ++++ P +YN ++ G+ + + A + EM ++ + PNV +Y ++
Sbjct: 463 SRLF--KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
E C+ R+ A RLV++M GI+P+ + + +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 6/334 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
F ILI YA+ G V+ A+ F + + A + ++ LCK GRV+ A YF
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQ----QGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
+ +D+ +P VYN L++G + AE LEM + N + + ++++ +C
Sbjct: 430 EQM--IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ RV + +L + M + G++PN I YNT+I+G AG+ +E ++ + P V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY++L+ GYCK +E A + K M S G P TYN + + + A LY ++
Sbjct: 548 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
ESG + TY+I+L LCK D A+Q+ + + ++ T ++I L ++ +
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
DEA F GLVP+Y T++ + + +G+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 10/350 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLD-MVKN-FDSGASLFEILLDSLCKQGRVKAAS 92
T+ L++ YA G + E LD MV+N +F IL+ + KQG+V A
Sbjct: 338 TYGTLLQGYATKGAL------VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 93 EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVE 152
F K ++ Q P Y ++ +S V+DA ++ +M E ++P + Y +L+
Sbjct: 392 LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP 212
G C + +RA L+ EM GI N I +N++ID + GR E + E + P
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKP 509
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
++TY +L+ GYC AG ++ A K+L M+S G P+ TY+ + K ++EDA+ L+
Sbjct: 510 NVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLF 569
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRM 332
++M SG +PD +TY+I+L+ L + + A ++ + G I+L T +++H LC+
Sbjct: 570 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 629
Query: 333 YKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
D+A F+++ L TF + D K G A+ L SS
Sbjct: 630 KLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA--PTVRVYNILLNGWFRSKNVKDAERFW 132
+ ILL LC + R + A E H + D+ P V Y ++NG+F+ + A +
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + P+VVTY +++ C+ + +D+A+ ++ M K G+ P+ + YN+++ G +
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
G+ +E G +++ P +VTY+ L+ CK G A KI M RG P TTY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
+ ++ G + + L M+ +G PD + IL+ K+ K+D A+ V +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G + + T +I +LC+ + ++A FE MI GL P + + L
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 180/385 (46%), Gaps = 15/385 (3%)
Query: 17 LLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFE 76
++ D GG PD VS + +I + + G + A T+ + ++ + + +
Sbjct: 183 MMADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT----YN 235
Query: 77 ILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMR 136
++ +LCK + A E + + P YN +L+G+ S K+A F +MR
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 137 KENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFE 196
+ V P+VVTY L++ C+ R A ++ M K G++P Y T++ G G
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFF 256
E+ G+++ + P ++ L+ Y K G ++ A + M +G P+ TY
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 257 RYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
K G+VEDAM + +MI+ G +P + Y+ L+ LC +K + A ++ EM RG
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++ +I C+ + E+ FE M+R G+ P+ +T+ L + + G A KL
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 377 CNVMSSV---PRSM---ELLDSRCK 395
+ M SV P ++ L++ CK
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 37/337 (10%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L C G+ K A + K + P V Y++L++ ++ +A + +
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRS--DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 135 MRKENVTPNVVTYGTLVEG-----------------------------------YCRLRR 159
M K + P + TYGTL++G Y + +
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
VD+A+ + +MR++G+ PNA+ Y VI L ++GR E+ E+ + P + Y S
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
L+ G C E A +++ M+ RG + +N K G+V ++ L+ M+ G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 280 YTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
P+ +TY+ L+ C K+D A+++ M G + T + LI+ C++ + ++A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
F++M G+ P +T+ + + TA A++L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIR-------------------------------- 165
+ VTP++ TYG L+ CR R+D
Sbjct: 81 DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 140
Query: 166 ----LVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG---PTMVTYT 218
+++ M + G PN YN ++ GL + R +E ++ G P +V+YT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+++ G+ K GD + A M+ RG LP TYN K ++ AM + M+++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
G PD +TY+ +L C + AI K+M+ G + D+ T ++L+ LC+ + EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 339 SAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
F+ M +RGL P T+ L + +G L ++M
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 109/255 (42%), Gaps = 2/255 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ C G++ A + + P Y+ L+NG+ + ++DA + E
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLINGYCKISRMEDALVLFKE 571
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M V+P+++TY +++G + RR A L + + G + YN ++ GL +
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ M + + + T+ ++ K G + A + S G +P+ TY
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G +E+ L+ M ++G T D + +++ L + ++ A + +
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Query: 315 CDIDLDTSTMLIHLL 329
++ T+++ I LL
Sbjct: 752 FSLEASTASLFIDLL 766
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 182/356 (51%), Gaps = 16/356 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI +L K ++FD+AW L+ D++ P V+ T +I+IR+Y V AI TF
Sbjct: 167 MISILGKMRKFDTAWTLI-DEMRKFS-PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYK 224
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + G F+ LL +LC+ V A K+ + + +NI+LNGW
Sbjct: 225 RFKL----EMGIDDFQSLLSALCRYKNVSDAGHLIFCNKD---KYPFDAKSFNIVLNGWC 277
Query: 121 RS-KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ ++AER W+EM V +VV+Y +++ Y + +++ ++L M+KE IEP+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKIL 237
VYN V+ L +A E +M + + E G P +VTY SL+K CKA E A ++
Sbjct: 338 KVYNAVVHALAKASFVSEARNLM-KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TY+ F R + G E+ L KM + G P TY +L++ LC+
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
D + + EMK + DL + ++IH L K +EA +++M +G+ P+
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL---VEGYCRLRR 159
Q + +VR Y+ +++ + + A EMRK +P++V TL + YC +
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHD 212
Query: 160 VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGP---TMVT 216
V +AI ++ +E + +++ L R++ VS + C +
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALC---RYKNVSDA-GHLIFCNKDKYPFDAKS 268
Query: 217 YTSLVKGYCKA-GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+ ++ G+C G A ++ M + G +Y+ +SK G + + L+ +M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC-RGCDIDLDTSTMLIHLLCRMYK 334
+ PDR Y+ ++ L K + A + K M+ +G + ++ T LI LC+ K
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 335 FDEASAEFEDMIRRGLVPHYLTF 357
+EA F++M+ +GL P T+
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTY 411
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV Y +L+ R ++ + W EM+++ V P++ +Y ++ G +++ A
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGY 497
Query: 167 VKEMRKEGIEPNAIVYNTV 185
KEM+ +G+ PN V + +
Sbjct: 498 YKEMKDKGMRPNENVEDMI 516
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 62/442 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L+KAK D A L++ + P+ + F+ +G +EA+ EFA+
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI--------SGYIEAS----EFAS 540
Query: 61 NLDMVKNFDS-----GASLFEILLDSLCKQGRV-KAASEYFHKRKELDQSWAPTVRVYNI 114
VK L L++ CK+G+V +A S Y R +DQ + Y +
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY---RSMVDQGILGDAKTYTV 597
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L+NG F++ V DAE + EMR + + P+V +YG L+ G+ +L + +A + EM +EG
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
+ PN I+YN ++ G +G E+ +++ V P VTY +++ GYCK+GDL A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 235 KILKMMISRGFLP----------------------------------SPTTYNYFFRYFS 260
++ M +G +P S +N +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 261 KFGKVEDAMNLYRKMIESGY----TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCD 316
KFGK E + ++++ + P+ +TY+I++ LCKE L+ A ++ +M+
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 317 IDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ T T L++ +M + E F++ I G+ P ++ + + + F K GMT A L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 377 CNVM---SSVPRSMELLDSRCK 395
+ M ++V +L S C+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCR 919
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 2/310 (0%)
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
A + L++ C++ V+ E + K+ + +P Y ++ G S ++ A
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNI 439
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM PNVV Y TL++ + + R A+R++KEM+++GI P+ YN++I GL +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
A R +E + + P TY + + GY +A + A K +K M G LP+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ K GKV +A + YR M++ G D TY +L+ L K DK+D A ++ +EM+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+G D+ + +LI+ ++ +AS+ F++M+ GL P+ + + L F + G
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 372 LAQKLCNVMS 381
A++L + MS
Sbjct: 680 KAKELLDEMS 689
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWA-PTVRVYNILLNGWFRSKNVKDAERFWL 133
+ ++ +C G + A ++ KE+ S P V +Y L+ + ++ DA R
Sbjct: 420 YGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM+++ + P++ Y +L+ G + +R+D A + EM + G++PNA Y I G +EA
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
F ++ C P V T L+ YCK G + A + M+ +G L TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K KV+DA ++R+M G PD +Y +L+ K + A + EM
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
G ++ ML+ CR + ++A ++M +GL P+ +T+ + D + K G A A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 374 QKLCNVM---SSVPRSM---ELLDSRCK 395
+L + M VP S L+D C+
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +L++ K G ++ AS F + E + P V +YN+LL G+ RS ++ A+ E
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PN VTY T+++GYC+ + A RL EM+ +G+ P++ VY T++DG
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 195 FEE------------------------------------------VSGMMERFLVCEPGP 212
E + G +RF P
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF----GKP 803
Query: 213 TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLY 272
VTY ++ CK G+LE A ++ M + +P+ TY + K G+ + ++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 273 RKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR-----GCDIDLDTSTMLIH 327
+ I +G PD + Y +++ KE A+ + +M + GC + + T L+
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
++ + + A E+M+R +P T L +E
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 6/299 (2%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ P Y++L++G + K ++DA+ +EM V+ + TY L++G + R D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A LV EM GI +Y+ I + + G E+ + + + P Y SL++
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
GYC+ ++ ++L M R + SP TY + G ++ A N+ ++MI SG P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
+ + Y L+K + + A++V KEMK +G D+ LI L + + DEA +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCK 395
+M+ GL P+ T+ + + A A K C V+ + L++ CK
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 140/370 (37%), Gaps = 89/370 (24%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L K + D A + + G PD S + +LI +++ G ++ A F+ +M
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFS---YGVLINGFSKLGNMQKASSIFD-----EM 653
Query: 65 VK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSK 123
V+ ++ +LL C+ G ++ A E + + P Y +++G+ +S
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV--KGLHPNAVTYCTIIDGYCKSG 711
Query: 124 NVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLV---------------- 167
++ +A R + EM+ + + P+ Y TLV+G CRL V+RAI +
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 168 ----------KEMRKEGI------------EPNAIVYNTVIDGLVEAGRFEEVSGMMERF 205
E++ E + +PN + YN +ID L + G E + +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 206 LVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY----NYFFRY--- 258
PT++TYTSL+ GY K G + I+ G P Y N F +
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 259 ---------------------------------FSKFGKVEDAMNLYRKMIESGYTPDRL 285
F+K G++E A + M+ Y PD
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 286 TYHILLKILC 295
T L+ C
Sbjct: 952 TVIELINESC 961
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 29/241 (12%)
Query: 145 VTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR----FEEVSG 200
V +G L +GY ++ A+ + + P ++D L+ R ++ G
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLE---------------------GASKILKM 239
M+ER +V + + TY L+ +C+AG+++ GA K+ +
Sbjct: 212 MVERNVVFD----VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G +P TY+ K ++EDA +L +M G + D TY +L+ L K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
D A + EM G +I I ++ + ++A A F+ MI GL+P +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 360 L 360
L
Sbjct: 388 L 388
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V+ ++ V I R + + E +N + + ++DSLC+ G
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKME-------ERNVKADVFTYSTIIDSLCRDGC 243
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ AA F KE++ + +V YN L+ G ++ D +M + PNV+T
Sbjct: 244 IDAAISLF---KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A L KEM GI PN I YNT++DG R E + M++ +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P +VT+TSL+KGYC ++ K+ + + RG + + TY+ + F + GK++
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A L+++M+ G PD +TY ILL LC KL+ A+++ ++++ D+ + T +I
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++A F + +G+ P+ +T+ + K+G + A L
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 180/391 (46%), Gaps = 15/391 (3%)
Query: 12 DSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSG 71
D A L + I +P V F I R + +V +F L++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLV------LDFCKQLEL-NGIAHN 122
Query: 72 ASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
I+++ C+ + A K +L + P +N L+ G F V +A
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKL--GYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
M + P+VVTY ++V G CR A+ L+++M + ++ + Y+T+ID L
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G + + + ++VTY SLV+G CKAG + +LK M+SR +P+ T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N F K GK+++A LY++MI G +P+ +TY+ L+ C +++L A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
C D+ T T LI C + + D+ F ++ +RGLV + +T+ L F + G
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 372 LAQKLCNVMSS---VPRSME---LLDSRCKD 396
LA++L M S +P M LLD C +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ +I R G ++AAI F+ K S + L+ LCK G+ +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEME----TKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ + + P V +N+LL+ + + +++A + EM ++PN++TY TL++GY
Sbjct: 286 L--KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEP 210
C R+ A ++ M + P+ + + ++I G R ++ + +R LV
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV--- 400
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
VTY+ LV+G+C++G ++ A ++ + M+S G LP TY GK+E A+
Sbjct: 401 -ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ + +S + Y +++ +CK K++ A + + C+G ++ T T++I LC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ EA+ M G P+ T+ L + G + KL M S
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+++ L KA +++ LL D + VP+ + TF +L+ + + G ++ A ++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVI---TFNVLLDVFVKEGKLQEANELYKEM- 324
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D C Q R+ A+ + +P + + L+ G+
Sbjct: 325 ---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYC 379
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
K V D + + + K + N VTY LV+G+C+ ++ A L +EM G+ P+ +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G+ E+ + E + +V YT++++G CK G +E A + +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P+ TY K G + +A L RKM E G P+ TY+ L++ ++ L
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +EMK G D + M+I +L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA+ L+++MI S P + + + + + +L + K+++ G ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
++I+ CR K A + +++ G P TF L
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 165/328 (50%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC +GRV A E + E+ P + N L+NG S +A +
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTYG ++ C+ + A+ L+++M + I+ +A+ Y+ +IDGL + G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++TY L+ G+C AG + +K+L+ MI R P+ T++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A L+++MI G PD +TY L+ CKE+ LD A Q+ M +G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
CD ++ T +LI+ C+ + D+ F M RG+V +T+ L F + G +A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 375 KLCNVMSS--VPRSME----LLDSRCKD 396
+L M S VP ++ LLD C +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
+N A + I++D LCK G + A F++ + + + YNIL+ G+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM--KGITTNIITYNILIGGFCNAGRW 314
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
D + +M K + PNVVT+ L++ + + ++ A L KEM GI P+ I Y ++
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
IDG + ++ + M++ + P + T+ L+ GYCKA ++ ++ + M RG
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
+ TYN + F + GK+ A L+++M+ P+ +TY ILL LC + + A++
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++++ ++D+ ++IH +C K D+A F + +G+ P T+ +
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 366 KRGMTALAQKL 376
K+G + A+ L
Sbjct: 555 KKGPLSEAELL 565
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 147/266 (55%), Gaps = 2/266 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
+L+ +CK G+ A E K +E ++ Y+I+++G + ++ +A + EM
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ +T N++TY L+ G+C R D +L+++M K I PN + ++ +ID V+ G+ E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P +TYTSL+ G+CK L+ A++++ +M+S+G P+ T+N
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
+ K +++D + L+RKM G D +TY+ L++ C+ KL++A ++ +EM R
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFE 343
++ T +L+ LC + ++A FE
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFE 497
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 2/291 (0%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC G K A K ++ P Y +LN +S A +M +
Sbjct: 199 LVNGLCLSG--KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
N+ + V Y +++G C+ +D A L EM +GI N I YN +I G AGR+++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ ++ + + P +VT++ L+ + K G L A ++ K MI RG P TY
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K ++ A + M+ G P+ T++IL+ CK +++D +++ ++M RG
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D T LI C + K + A F++M+ R + P+ +T+K L D G
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PTV ++ L + ++K +M + + N+ T ++ +CR R++ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ ++ K G EPN I ++T+I+GL GR E +++R + P ++T +LV G C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+G A ++ M+ G P+ TY K G+ AM L RKM E D +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK LD A + EM+ +G ++ T +LI C ++D+ + DMI
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM---SSVPRSM---ELLDSRCKD 396
+R + P+ +TF L D F K G A++L M P ++ L+D CK+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++M K + + IL+ C GR ++
Sbjct: 266 YSIIIDGLCKHGSLDNA---FNLFNEMEM-KGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V +++L++ + + +++AE EM + P+ +TY +L++G+C
Sbjct: 322 --RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ +D+A ++V M +G +PN +N +I+G +A R ++ + + + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G L A ++ + M+SR P+ TY G+ E A+ ++ K+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G + T ++I LC+
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
EA F M G P T+ L
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I A +D LL D I P+ V TF +LI + + G + A E +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVV---TFSVLIDSFVKEGKLREA----EELH 356
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D CK+ + A++ + + P +R +NIL+NG+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM--VSKGCDPNIRTFNILINGYC 414
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + D + +M V + VTY TL++G+C L +++ A L +EM + PN +
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G E+ + E+ + + Y ++ G C A ++ A + +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN K G + +A L+RKM E G+ PD TY+IL++ +
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
++++ +E+K G +D T M+I +L
Sbjct: 595 TKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P PT++ ++ L K + + K M +G + T + F + K+ A
Sbjct: 84 PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY P+ +T+ L+ LC E ++ A+++ M G DL T L++ L
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
C K EA + M+ G P+ +T+ + + K G TALA +L
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+ D AI L ++M P I ++ + + + +++ V + ++ + + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
++ +C+ L A + +I G+ P+ T++ G+V +A+ L +M+E
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 279 GYTPD-----------------------------------RLTYHILLKILCKEDKLDLA 303
G+ PD +TY +L ++CK + LA
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 304 IQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
+++ ++M+ R +D +++I LC+ D A F +M +G+ + +T+ L
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 364 FKKRG 368
F G
Sbjct: 308 FCNAG 312
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G A +K ++ P V +YN +++G + K++ DA + E
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQ--GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I P+ ++ +ID V+ G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P++VTY+SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K+ +VE+ M ++R+M + G + +TY+IL++ L + D+A ++ KEM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
++ T L+ LC+ K ++A FE + R + P T+ + + K G
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 184/402 (45%), Gaps = 15/402 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ +AK +FD L +++ +P + T+ ILI + R + A+
Sbjct: 87 LLSAIAKMNKFDVVISLG-EQMQNLGIPH--NHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
L N + +SL L+ C R+ A + + P +N L++G F
Sbjct: 144 KLGYEPNIVTLSSL----LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLF 197
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+A M + P++VTYG +V G C+ D A L+ +M + +EP +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
+YNT+IDGL + ++ + + P +VTY+SL+ C G AS++L M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
I R P T++ F K GK+ +A LY +M++ P +TY L+ C D+L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A Q+ + M + C D+ T LI C+ + +E F +M +RGLV + +T+ L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 361 NDEFKKRGMTALAQKLCNVMSS--VPRSM----ELLDSRCKD 396
+ G +AQ++ M S VP ++ LLD CK+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 136/262 (51%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + + A +M + + P V+ Y T+++G C+ + +D A+ L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P + T+++L+ + K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ M+ R PS TY+ F ++++A ++ M+ PD +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++V +EM RG + T +LI L + D A F++M+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P+ +T+ L D K G
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNG 480
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 171/350 (48%), Gaps = 11/350 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ +++ + G + A F N ++ K + G ++ ++D LCK
Sbjct: 219 PDLV---TYGVVVNGLCKRGDTDLA---FNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKH 271
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F KE++ + P V Y+ L++ DA R +M + + P+V T
Sbjct: 272 MDDALNLF---KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + ++ A +L EM K I+P+ + Y+++I+G R +E M E +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
P +VTY +L+KG+CK +E ++ + M RG + + TYN + + G +
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
A ++++M+ G P+ +TY+ LL LCK KL+ A+ V + ++ + + T ++I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C+ K ++ F ++ +G+ P + + + F ++G A L
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L K K D A L + P+ V+ + + + Y R W+
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR--------WSDASRL 313
Query: 61 NLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
DM+ + + F L+D+ K+G++ A + + + + +S P++ Y+ L+NG+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGF 371
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ +A++ + M ++ P+VVTY TL++G+C+ +RV+ + + +EM + G+ N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN +I GL +AG + + + + P ++TY +L+ G CK G LE A + +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ P+ TYN K GKVED +L+ + G PD + Y+ ++ C++
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFD-EASAEFEDMIRR---------- 348
+ A + KEMK G + LI R+ D EASAE +R
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIR--ARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 349 GLVPHYLTFKRLNDEF 364
GLV + L RL+ F
Sbjct: 610 GLVTNMLHDGRLDKSF 625
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+GL E + ++ + + P P+++ ++ L+ K + + + M + G
Sbjct: 55 NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
+ TY+ F + ++ A+ + KM++ GY P+ +T LL C ++ A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
+M G + T LIH L K EA A + M+ +G P +T+ + + K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 367 RGMTALAQKLCNVM 380
RG T LA L N M
Sbjct: 234 RGDTDLAFNLLNKM 247
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 30 FVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVK 89
F + TF L+ +AG V+ AI + + + +D + ++ LCK G VK
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVM----LQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + + +P YN L++ + V++A + + + P+V T+ +
Sbjct: 348 EAVEVLDQM--ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
L++G C R A+ L +EMR +G EP+ YN +ID L G+ +E M+++ +
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
+++TY +L+ G+CKA A +I M G + TYN K +VEDA
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L +MI G PD+ TY+ LL C+ + A + + M GC+ D+ T LI L
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 330 CRMYKFDEASAEFEDMIRRG--LVPH 353
C+ + + AS + +G L PH
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPH 611
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 181/383 (47%), Gaps = 10/383 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+IK L +A + A +L D VPD + TF +++ Y G ++ A+ E
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPD---EKTFTTVMQGYIEEGDLDGALRIRE--- 248
Query: 61 NLDMVKNFDSGASL-FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
MV+ S +++ +++ CK+GRV+ A + + D + P +N L+NG
Sbjct: 249 --QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD-GFFPDQYTFNTLVNGL 305
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++ +VK A M +E P+V TY +++ G C+L V A+ ++ +M PN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YNT+I L + + EE + + P + T+ SL++G C + A ++ +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S+G P TYN GK+++A+N+ ++M SG +TY+ L+ CK +K
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
A ++ EM+ G + T LI LC+ + ++A+ + MI G P T+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 360 LNDEFKKRGMTALAQKLCNVMSS 382
L F + G A + M+S
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTS 568
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 163/330 (49%), Gaps = 9/330 (2%)
Query: 73 SLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
S F +L+ +LC+ +++ A P + + ++ G+ ++ A R
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVE 191
+M + + + V+ +V G+C+ RV+ A+ ++EM ++G P+ +NT+++GL +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
AG + +M+ L P + TY S++ G CK G+++ A ++L MI+R P+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN K +VE+A L R + G PD T++ L++ LC +A+++ +EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
+GC+ D T MLI LC K DEA + M G +T+ L D F K T
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 372 LAQKLCNVMS--SVPRSM----ELLDSRCK 395
A+++ + M V R+ L+D CK
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ +LCK+ +V+ A+E R + P V +N L+ G ++N + A + E
Sbjct: 368 YNTLISTLCKENQVEEATEL--ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ TY L++ C ++D A+ ++K+M G + I YNT+IDG +A +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + V VTY +L+ G CK+ +E A++++ MI G P TYN
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+F + G ++ A ++ + M +G PD +TY L+ LCK ++++A ++ + ++ +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
++ +I L R K EA F +M+ + P
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 19/346 (5%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
+++ + + G VE A+ + +N D F F L++ LCK G VK A E
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQD---GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
L + + P V YN +++G + VK+A +M + +PN VTY TL+ C+
Sbjct: 321 M--LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL-------VEAGRFEEVSGMMERFLVCEP 210
+V+ A L + + +GI P+ +N++I GL V FEE+ R CEP
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-----RSKGCEP 433
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
TY L+ C G L+ A +LK M G S TYN F K K +A
Sbjct: 434 DE--FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
++ +M G + + +TY+ L+ LCK +++ A Q+ +M G D T L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
R +A+ + M G P +T+ L K G +A KL
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 38/342 (11%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LLDSL Q AA F+ + +++P +Y +L RS + D ++ +M+
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE-GIEPNAIVYNTVIDGLVEAGRFE 196
T+ L+E Y + D + +V M E G++P+ YN +++ LV+ +
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK 171
Query: 197 EVSGMMERFLVCEPGPTMVTYTSLVKGYCKA----------------------------- 227
V + V P + T+ L+K C+A
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 228 ------GDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMI-ESGY 280
GDL+GA +I + M+ G S + N F K G+VEDA+N ++M + G+
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
PD+ T++ L+ LCK + AI++ M G D D+ T +I LC++ + EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ MI R P+ +T+ L K A +L V++S
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 5/333 (1%)
Query: 51 AAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVR 110
IW F + LD F +F IL++ CK+G + A + F + + +S PTV
Sbjct: 222 GTIWGF-YMEILD--AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK--RSLQPTVV 276
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
+N L+NG+ + N+ + R +M K P+V TY L+ C+ ++D A L EM
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 171 RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDL 230
K G+ PN +++ T+I G G + + ++ L P +V Y +LV G+CK GDL
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 231 EGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHIL 290
A I+ MI RG P TY F + G VE A+ + ++M ++G DR+ + L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 291 LKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+ +CKE ++ A + +EM G D T TM++ C+ ++M G
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 351 VPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSV 383
VP +T+ L + K G A L + M ++
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+F L+ + G + E + +K L + P + +YN L+NG+ ++ ++ A
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + + P+ +TY TL++G+CR V+ A+ + KEM + GIE + + ++ ++ G+ + G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
R + + L P VTYT ++ +CK GD + K+LK M S G +PS TYN
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K G++++A L M+ G PD +TY+ LL+
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWL 133
+ L+D C+ G V+ A E RKE+DQ+ RV ++ L+ G + V DAER
Sbjct: 418 YTTLIDGFCRGGDVETALEI---RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM + + P+ VTY +++ +C+ +L+KEM+ +G P+ + YN +++GL + G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
+ + +++ L P +TY +L++G+ + +
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%)
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
+ DA + + RK + G L++ +L E+ G N V+N
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+++ + G + + + PT+V++ +L+ GYCK G+L+ ++ M
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY+ K K++ A L+ +M + G P+ + + L+ + ++DL
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ ++M +G D+ L++ C+ A + MIRRGL P +T+ L D F
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 365 KKRG 368
+ G
Sbjct: 426 CRGG 429
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+ +++D+ CK+G + F KE+ P+V YN+LLNG + +K+A+
Sbjct: 488 YTMMMDAFCKKGDAQTG---FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M V P+ +TY TL+EG+ R + + R +++ + GI + Y ++++ L A
Sbjct: 545 AMLNIGVVPDDITYNTLLEGH--HRHANSSKRYIQK-PEIGIVADLASYKSIVNELDRAS 601
Query: 194 R 194
+
Sbjct: 602 K 602
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L++ LC +GRV A E + E+ PT+ N L+NG + V DA
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHK--PTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + PN VTYG +++ C+ + A+ L+++M + I+ +A+ Y+ +IDGL + G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + ++ YT+L++G+C AG + +K+L+ MI R P ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K GK+ +A L+++MI+ G +PD +TY L+ CKE++LD A + M +G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
C ++ T +LI+ C+ D+ F M RG+V +T+ L F + G +A+
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 375 KLCNVMSS 382
+L M S
Sbjct: 443 ELFQEMVS 450
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I++D LCK G + A F++ + + + + +Y L+ G+ + D + +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEI--KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K +TP+VV + L++ + + ++ A L KEM + GI P+ + Y ++IDG + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + M++ + GP + T+ L+ GYCKA ++ ++ + M RG + TYN
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + GK+E A L+++M+ PD ++Y ILL LC + + A+++ ++++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
++D+ ++IH +C K D+A F + +G+ P T+ + K+G + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 375 KL 376
L
Sbjct: 548 LL 549
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ I+I + G ++ A F N ++ +K F + ++ L+ C GR ++
Sbjct: 250 YSIIIDGLCKDGSLDNA---FNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R + + P V ++ L++ + + +++AE EM + ++P+ VTY +L++G+C
Sbjct: 306 --RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ ++D+A ++ M +G PN +N +I+G +A ++ + + + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
TY +L++G+C+ G LE A ++ + M+SR P +Y G+ E A+ ++ K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
+S D Y+I++ +C K+D A + + +G D+ T ++I LC+
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRL 360
EA F M G P+ T+ L
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNIL 568
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ A +D LL D I PD V+ F LI + + G + A E +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA---FSALIDCFVKEGKLREA----EELH 340
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + L+D CK+ ++ A+ + + P +R +NIL+NG+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSKGCGPNIRTFNILINGYC 398
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ + D + +M V + VTY TL++G+C L +++ A L +EM + P+ +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y ++DGL + G E+ + E+ + + Y ++ G C A ++ A + +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+G P TYN K G + +A L+RKM E G++P+ TY+IL++ E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ +E+K G +D T M++ +L
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P ++ + L R ++ D + L K+M +GI N + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+ + M + + P VT+++L+ G C G + A +++ M+ G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI------------- 293
P+ T N GKV DA+ L +M+E+G+ P+ +TY +LK+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 294 ----------------------LCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
LCK+ LD A + EM+ +G D+ T LI C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++D+ + DMI+R + P + F L D F K G A++L
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P ++ ++ L + + + K M +G + T + + K+ A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ K+I+ GY PD +T+ L+ LC E ++ A+++ M G L T L++ L
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME- 388
C K +A + M+ G P+ +T+ + K G TALA +L M ++
Sbjct: 188 CLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDA 247
Query: 389 -----LLDSRCKD 396
++D CKD
Sbjct: 248 VKYSIIIDGLCKD 260
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 264 KVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
K +DA++L+++M S P + + L ++ + + DL + + K+M+ +G +L T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 324 MLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++I+ CR K A + +I+ G P +TF L + G + A +L + M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 10/350 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
P+ ++ F LI + G ++ A E +MV+N + L+D LCK+G
Sbjct: 285 PNLIN---FTSLIDGLCKKGSIKQAFEMLE-----EMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
+ A F K D ++ P V Y ++ G+ + + AE + M+++ + PNV T
Sbjct: 337 WTEKAFRLFLKLVRSD-TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y TL+ G+C+ RA L+ M EG PN YN ID L + R E ++ +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
C VTYT L++ CK D+ A M GF N F + K++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
++ L++ ++ G P + TY ++ CKE +DLA++ MK GC D T LI
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
LC+ DEA +E MI RGL P +T L E+ KR +A A L
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 53/341 (15%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
L+ + DSL G ++ A E V +L + + +A +
Sbjct: 129 LYLVTADSLLANGNLQKAHE-----------------VMRCMLRNFSEIGRLNEAVGMVM 171
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M+ + +TP+ +T ++E L ++ A + EM G+ P++ Y ++ G G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 194 RFEE----VSGMMERFLV-------------CEPG------------------PTMVTYT 218
+ +E ++GM++R + CE G P ++ +T
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
SL+ G CK G ++ A ++L+ M+ G+ P+ T+ K G E A L+ K++ S
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 279 -GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE 337
Y P+ TY ++ CKEDKL+ A + MK +G +++T T LI+ C+ F
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
A M G +P+ T+ D K+ A +L N
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P Y +++ G FR +++A+R+ M + P+ T ++ C V+RAI
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
++M G +PN I + ++IDGL + G ++ M+E + P + T+T+L+ G CK
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 227 AGDLEGASKI-LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRL 285
G E A ++ LK++ S + P+ TY + K K+ A L+ +M E G P+
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 286 TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
TY L+ CK A ++ M G ++ T I LC+ + EA
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 346 IRRGLVPHYLTFKRLNDE 363
GL +T+ L E
Sbjct: 455 FSCGLEADGVTYTILIQE 472
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
++ + + R++ A+ +V +M+ +G+ P++I N V++ VE G E + + V
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P +Y +V G + G ++ A + L MI RGF+P T + G V A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+RKMI+ G+ P+ + + L+ LCK+ + A ++ +EM G ++ T T LI L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 330 C---------RMY---------------------------KFDEASAEFEDMIRRGLVPH 353
C R++ K + A F M +GL P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 354 YLTFKRLNDEFKKRGMTALAQKLCNVM 380
T+ L + K G A +L N+M
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLM 419
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ IL+ CKQ + A +F + + + +R+ NIL+ + R K +K++ER +
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + P TY +++ YC+ +D A++ M++ G P++ Y ++I GL +
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + E + P VT +L YCK D A +L+ + + ++ + T
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT--- 640
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
R KV A ++K++E + DR+T + K +L +++ +
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 37/338 (10%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C+ R + A + P V +YN ++NG +++++ +A + M K
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGF--GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ + + VTY TL+ G R A RL+++M K I+PN I + +ID V+ G E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ + + P + TY SL+ G+C G L A + +M+S+G P TYN
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 258 YFSKFGKVEDAMNL-----------------------------------YRKMIESGYTP 282
F K +VED M L + +M++ G +P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D +TY+ILL LC K++ A+ + ++++ D+D+ T ++I LCR K EA F
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
+ R+G+ P + + + ++G+ A KLC M
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K + A + L+ L GR A+ R + + P V + L++ + + N+
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLL--RDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + +V PNV TY +L+ G+C + A + M +G P+ + YNT+
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPG-----PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
I G ++ R E+ GM L CE TY +L+ GYC+AG L A K+ M
Sbjct: 331 ITGFCKSKRVED--GMK---LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+ G P TYN GK+E A+ + + +S D +TY+I+++ LC+ DKL
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
A + + + +G D +I LCR EA M G +P +R+
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS----ERI 501
Query: 361 NDEFKKRGMTALAQKL 376
DE + T+L+ +L
Sbjct: 502 YDETLRDHYTSLSAEL 517
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 131 FWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLV 190
+ +M ++ ++ ++ L+ +CR R+ A+ L+ +M K G P+ + ++++G
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 191 EAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
+ RF+E +++ P +V Y +++ G CK DL A ++ M +G
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 251 TYN-------------------------------YFFR----YFSKFGKVEDAMNLYRKM 275
TYN FF F K G + +A NLY++M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
I P+ TY+ L+ C L A + M +GC D+ T LI C+ +
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMEL 389
++ F +M +GLV T+ L + + G +AQK+ C V + L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 390 LDSRCKD 396
LD C +
Sbjct: 401 LDCLCNN 407
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%)
Query: 127 DAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVI 186
DA + EM + P++V + ++ ++ + D I L +M GI + + +I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
R ++ + + P++VT SL+ G+C+ + A ++ M GF+
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
P+ YN K + +A+ ++ M + G D +TY+ L+ L + A ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 307 SKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
++M R D ++ T LI + EA +++MIRR +VP+ T+ L + F
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 367 RGMTALAQKLCNVMSS 382
G A+ + ++M S
Sbjct: 302 HGCLGDAKYMFDLMVS 317
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 215 VTYTSLVKGYCKAGDL---EGASKILKMMISRGFLPSPTTYNYFFRYFSKFG--KVEDAM 269
+ ++S VKG+ + L G + + +SR F + ++Y R ++ K +DA
Sbjct: 7 IAFSSSVKGFVRRHYLLLERGNNP--ETSLSRSFSGASHHHHYRERLRNELHCIKFDDAF 64
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++S P + + +L ++ K +K D+ I + +M+ G DL + T+LIH
Sbjct: 65 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
CR + A A M++ G P +T L + F
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF 159
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 185/390 (47%), Gaps = 25/390 (6%)
Query: 3 KVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ L A +++ A+ ++ + IG +PD T+ ++ A +E A FE
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPD---TSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 63 DMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
+V + + + I++DS CK G ++ A ++F++ +E+ P V Y L++ + ++
Sbjct: 513 GLVADVYT----YTIMVDSFCKAGLIEQARKWFNEMREV--GCTPNVVTYTALIHAYLKA 566
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM------------ 170
K V A + M E PN+VTY L++G+C+ +V++A ++ + M
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 171 ----RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
PN + Y ++DG ++ R EE +++ + P + Y +L+ G CK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L+ A ++ M GF + TY+ + K + + A + KM+E+ P+ +
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y ++ LCK K D A ++ + M+ +GC ++ T T +I + K + E M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+G+ P+Y+T++ L D K G +A L
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 184/411 (44%), Gaps = 60/411 (14%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEF-- 58
+I KAK+ A L + +P+ V T+ LI + +AG VE A FE
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIV---TYSALIDGHCKAGQVEKACQIFERMC 615
Query: 59 ----ANNLDM-VKNFDSGAS-----LFEILLDSLCKQGRVKAASEYFHKRKELD----QS 104
++DM K +D + + LLD CK RV+ A RK LD +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA------RKLLDAMSMEG 669
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
P VY+ L++G + + +A+ EM + + TY +L++ Y +++R D A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+++ +M + PN ++Y +IDGL + G+ +E +M+ P +VTYT+++ G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL------------- 271
G +E ++L+ M S+G P+ TY + K G ++ A NL
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 272 --YRKMIES------------------GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YRK+IE P Y +L+ L K +L++A+++ +E+
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 312 CRGCDIDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ +ST LI LC K + A F +M ++G++P +F L
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 58/434 (13%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEF 58
+ VL + + ++ + L+++G + DF S+ T+ LI+ + +A +++A
Sbjct: 203 LNVLVRKHCRNGSFSIALEELG--RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ + N SLCK G+ + A +++ P Y L++G
Sbjct: 261 MS----LANLRMDGFTLRCFAYSLCKVGKWREALTLVET-----ENFVPDTVFYTKLISG 311
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ ++A F MR + PNVVTY TL+ G +++ R R++ M EG P+
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV----------------- 221
++N+++ +G ++++ + C P V Y L+
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 222 --KGY----------------------CKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
K Y C AG E A +++ MI +GF+P +TY+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
Y K+E A L+ +M G D TY I++ CK ++ A + EM+ GC
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T T LIH + K A+ FE M+ G +P+ +T+ L D K G +K C
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV---EKAC 608
Query: 378 NVMSSVPRSMELLD 391
+ + S ++ D
Sbjct: 609 QIFERMCGSKDVPD 622
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 37/300 (12%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
+++ L+D LCK G++ A E K + + + T+ Y+ L++ +F+ K A +
Sbjct: 676 VYDALIDGLCKVGKLDEAQEV--KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
+M + + PNVV Y +++G C++ + D A +L++ M ++G +PN + Y +IDG G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ E ++ER P VTY L+ CK G L+ A +L+ M + Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 254 YFFRYFSK-----------FGKVEDA--MNLYRKMIESGYTPDRL--------------- 285
F+K G+ + A +++YR +I++ RL
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 286 -------TYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
TY+ L++ LC +K++ A Q+ EM +G ++ + LI L R K EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ ++D LCK G+ A + +E + P V Y +++G+ ++
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR-------------------KEG 174
M + V PN VTY L++ C+ +D A L++EM+ KE
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF 863
Query: 175 IE--------------PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV----T 216
IE P VY +ID L++A R E ++E V T+V T
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE--VATFSATLVDYSST 921
Query: 217 YTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
Y SL++ C A +E A ++ M +G +P ++ + + K+ +A+ L
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 3/256 (1%)
Query: 105 WAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAI 164
+ T VYN L++ R + K E F ++R ++ LV +CR A+
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220
Query: 165 RLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGY 224
+ ++ P+ YN +I ++A R + S + + T
Sbjct: 221 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 280
Query: 225 CKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDR 284
CK G A L ++ + F+P Y + E+AM+ +M + P+
Sbjct: 281 CKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337
Query: 285 LTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFED 344
+TY LL + +L +V M GC L+H C A +
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 345 MIRRGLVPHYLTFKRL 360
M++ G +P Y+ + L
Sbjct: 398 MVKCGHMPGYVVYNIL 413
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 186/380 (48%), Gaps = 12/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI+ A + +FDS LL +I + + +F+++ R Y +A + + A+ F
Sbjct: 83 MIESYANSGDFDSVE-KLLSRIRLEN--RVIIERSFIVVFRAYGKAHLPDKAVDLFH--- 136
Query: 61 NLDMVKNFDSGASL--FEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYNILL 116
MV F S+ F +L+ + +G E++ ++ + +P +N+++
Sbjct: 137 --RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+ + V A + M + P+ TY TL++G C+ R+D A+ L+ EM+ EG
Sbjct: 195 KALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254
Query: 177 PNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
P+ ++YN +IDGL + G V+ +++ + P VTY +L+ G C G L+ A +
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
L+ M+S +P+ TY K + DA+ L M E GY ++ Y +L+ L K
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
E K + A+ + ++M +GC ++ ++L+ LCR K +EA MI G +P+ T
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 357 FKRLNDEFKKRGMTALAQKL 376
+ L F K G+ A ++
Sbjct: 435 YSSLMKGFFKTGLCEEAVQV 454
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 37/364 (10%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S +F ++ G+ + +++ N +M N F +++ +LCK V A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
E F E + P Y L++G + + + +A EM+ E +P+ V Y L+
Sbjct: 207 IEVFRGMPE--RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C+ + R +LV M +G PN + YNT+I GL G+ ++ ++ER + +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P VTY +L+ G K A ++L M RG+ + Y+ K GK E+AM+L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDK-------------------------------- 299
+RKM E G P+ + Y +L+ LC+E K
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 300 ---LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ A+QV KEM GC + ++LI LC + + EA + M+ G+ P +
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 357 FKRL 360
+ +
Sbjct: 505 YSSI 508
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
++ +L+D LCK+G + ++ + P YN L++G + A
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNM--FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M PN VTYGTL+ G + RR A+RL+ M + G N +Y+ +I GL + G
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ EE + + P +V Y+ LV G C+ G A +IL MI+ G LP+ TY+
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
+ F K G E+A+ ++++M ++G + ++ Y +L+ LC ++ A+ V +M
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
G D + +I LC + D A + +M+
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 5/285 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC +G++ A + + P Y L+NG + + DA R
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERM--VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + N Y L+ G + + + A+ L ++M ++G +PN +VY+ ++DGL G+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E ++ R + P TY+SL+KG+ K G E A ++ K M G + Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR- 313
G+V++AM ++ KM+ G PD + Y ++K LC +D A+++ EM C+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 314 --GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
D+ T +L+ LC A M+ RG P +T
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 149/328 (45%), Gaps = 13/328 (3%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VP+ V+ +T LI G ++ A+ E + + N + L++ L KQ
Sbjct: 289 VPNEVTYNT---LIHGLCLKGKLDKAVSLLERMVSSKCIPN----DVTYGTLINGLVKQR 341
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R A +E + + +Y++L++G F+ ++A W +M ++ PN+V
Sbjct: 342 RATDAVRLLSSMEE--RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
Y LV+G CR + + A ++ M G PNA Y++++ G + G EE + +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
Y+ L+ G C G ++ A + M++ G P Y+ + G ++
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 267 DAMNLYRKMI---ESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTST 323
A+ LY +M+ E PD +TY+ILL LC + + A+ + M RGCD D+ T
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579
Query: 324 MLIHLLC-RMYKFDEASAEFEDMIRRGL 350
++ L + D+ + E+++ R L
Sbjct: 580 TFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ L++ + + G+ E A+ ++ + +N + +L+D LC GRVK A
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN----KFCYSVLIDGLCGVGRVKEAMMV 489
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM---RKENVTPNVVTYGTLV 151
+ K L P Y+ ++ G ++ A + + EM + P+VVTY L+
Sbjct: 490 WSKM--LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+G C + + RA+ L+ M G +P+ I NT ++ L E C+ G
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN------------SCDKG 595
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
+ + LV K + GA I+++M+ + P +T+ R K K+ A++
Sbjct: 596 RSFL--EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 54/212 (25%)
Query: 216 TYTSLVKGYCKAGDLEGASKIL-------KMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
T +S+++ Y +GD + K+L +++I R F+ FR + K + A
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFI-------VVFRAYGKAHLPDKA 131
Query: 269 MNLYRKMIES----------------------------------------GYTPDRLTYH 288
++L+ +M++ +P+ L+++
Sbjct: 132 VDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFN 191
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
+++K LCK +D AI+V + M R C D T L+ LC+ + DEA ++M
Sbjct: 192 LVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSE 251
Query: 349 GLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
G P + + L D K+G KL + M
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 19/404 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKD--TFVILIRRYARAGMVEAAIWTFEF 58
+ +A+ K++D L+L G E+ + + D T I+I Y R + A
Sbjct: 76 LCSAVARTKQYD----LVLGFCKGMEL-NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
A L ++ F L++ C +GRV A + E+ Q P + + L+NG
Sbjct: 131 AWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR--PDLVTVSTLING 184
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
V +A M + P+ VTYG ++ C+ A+ L ++M + I+ +
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ VID L + G F++ + + +VTY+SL+ G C G + +K+L+
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
MI R +P T++ F K GK+ +A LY +MI G PD +TY+ L+ CKE+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
L A Q+ M +GC+ D+ T ++LI+ C+ + D+ F ++ +GL+P+ +T+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 359 RLNDEFKKRGMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
L F + G A++L M S VP S+ LLD C +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 9/349 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V T+ ++ R ++G A+ F +N + + I++DSLCK G
Sbjct: 208 PDEV---TYGPVLNRLCKSGNSALALDLFRKMEE----RNIKASVVQYSIVIDSLCKDGS 260
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
A F++ + + V Y+ L+ G D + EM N+ P+VVT+
Sbjct: 261 FDDALSLFNEMEM--KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
L++ + + ++ A L EM GI P+ I YN++IDG + E + M + +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P +VTY+ L+ YCKA ++ ++ + + S+G +P+ TYN F + GK+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
A L+++M+ G P +TY ILL LC +L+ A+++ ++M+ + + ++IH
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+C K D+A + F + +G+ P +T+ + K+G + A L
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L ++D +L + IG + +PD V TF LI + + G ++EA E
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVV---TFSALIDVFVKEGKLLEAK----ELY 338
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
N + + + + L+D CK+ + A++ F + + P + Y+IL+N +
Sbjct: 339 NEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGCEPDIVTYSILINSY 395
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V D R + E+ + + PN +TY TLV G+C+ +++ A L +EM G+ P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y ++DGL + G + + E+ + Y ++ G C A ++ A +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P TYN K G + +A L+RKM E G TPD TY+IL++
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L ++++ +EMK G D T M+I +L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
PT +N L + R+K F M + ++ T ++ YCR +++ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ K G EP+ I ++T+++G GR E +++R + + P +VT ++L+ G C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G + A ++ M+ GF P TY K G A++L+RKM E +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y I++ LCK+ D A+ + EM+ +G D+ T + LI LC K+D+ + +MI
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCKD 396
R ++P +TF L D F K G A++L N M + P ++ L+D CK+
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 13/219 (5%)
Query: 187 DGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFL 246
+G+V+ + + + E + P PT + + L + + K M G
Sbjct: 44 NGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 247 PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQV 306
T + + K+ A ++ + + GY PD +T+ L+ C E ++ A+ +
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 307 SK---EMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDE 363
EMK R DL T + LI+ LC + EA + M+ G P +T+ + +
Sbjct: 163 VDRMVEMKQRP---DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 364 FKKRGMTALAQKLC------NVMSSVPRSMELLDSRCKD 396
K G +ALA L N+ +SV + ++DS CKD
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 197/398 (49%), Gaps = 25/398 (6%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MIK+L + + + A C+LLD + VP +D FV+LI Y +AG+V+ ++ F+
Sbjct: 156 MIKMLGEVSKLNHARCILLD-MPEKGVP--WDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+L + + S SLF+++L ++GR A YF+K + + PT YN++L G+F
Sbjct: 213 DLGVERTIKSYNSLFKVIL----RRGRYMMAKRYFNKM--VSEGVEPTRHTYNLMLWGFF 266
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
S ++ A RF+ +M+ ++P+ T+ T++ G+CR +++D A +L EM+ I P+ +
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y T+I G + R ++ + E P TY++L+ G C AG + A ILK M
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 241 ISRGFLPSPTTYNYFFRYF---SKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
+++ P + F + SK G + A + + M + Y +L++ CK
Sbjct: 387 MAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 298 DKLDLAIQ-----VSKEMKCRGCD-IDLDTSTM--LIHLLCRMYKFDEASAEFEDMIRRG 349
+ AI+ + KE+ R D ++++ S +I LC + +A F +++RG
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 350 LVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS--SVPR 385
V L K G + ++ +MS VPR
Sbjct: 505 -VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPR 541
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 7/270 (2%)
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
L+M ++ V + + L+E Y + V ++++ ++M+ G+E YN++ ++
Sbjct: 174 LDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRR 233
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
GR+ + + PT TY ++ G+ + LE A + + M +RG P T+
Sbjct: 234 GRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATF 293
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N F +F K+++A L+ +M + P ++Y ++K D++D +++ +EM+
Sbjct: 294 NTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRS 353
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT-FKRLNDEFKKRGMTA 371
G + + T + L+ LC K EA ++M+ + + P + F +L K G A
Sbjct: 354 SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMA 413
Query: 372 LAQKLCNVMSSVPRSME------LLDSRCK 395
A ++ M+++ E L++++CK
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 28/391 (7%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI + K+ D A L ++ G P VS + +I+ Y V+ + FE
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS---YTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPT-VRVYNILLNGW 119
+ + A+ + LL LC G++ A + + + AP ++ LL
Sbjct: 353 S----SGIEPNATTYSTLLPGLCDAGKMVEAKNIL--KNMMAKHIAPKDNSIFLKLLVSQ 406
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI---- 175
++ ++ A M NV YG L+E C+ +RAI+L+ + ++ I
Sbjct: 407 SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRH 466
Query: 176 ------EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGD 229
EP+A YN +I+ L G+ + ++ R L+ +L++G+ K G+
Sbjct: 467 QDTLEMEPSA--YNPIIEYLCNNGQTAKAE-VLFRQLMKRGVQDQDALNNLIRGHAKEGN 523
Query: 230 LEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHI 289
+ + +ILK+M RG Y + + G+ DA M+E G+ PD +
Sbjct: 524 PDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRS 583
Query: 290 LLKILCKEDKLDLAIQVSKEM--KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIR 347
+++ L ++ ++ A +V M K G + ++D ++ L +EA + + +
Sbjct: 584 VIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQ 643
Query: 348 RGLVPHYLTFKRLNDEFKKRGMTALAQKLCN 378
G H L ++G T A KL +
Sbjct: 644 NG---HTADLDSLLSVLSEKGKTIAALKLLD 671
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 111 VYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM 170
Y +L+ + DA+ M ++ P+ + +++E RV A R++ M
Sbjct: 545 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIM 604
Query: 171 --RKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
+ GIE N + +++ L+ G EE G ++ L+ + G T SL+ + G
Sbjct: 605 IDKNVGIEDNMDLIAKILEALLMRGHVEEALGRID--LLNQNGHT-ADLDSLLSVLSEKG 661
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
A K+L + R ++Y+ GK +A ++ K++E G + D +
Sbjct: 662 KTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSD 721
Query: 289 ILLKILCKEDKLDLAIQVSKEMK 311
L+K L +E A +S+ +K
Sbjct: 722 ELIKSLNQEGNTKQADVLSRMIK 744
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 18/347 (5%)
Query: 25 HEVPDF---VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDS 81
H++ DF S+ +V ++ + A F+F N+ + + ASL +L+ +
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLA---FKFYKNMREIGLPPTVASL-NVLIKA 165
Query: 82 LCKQ-GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENV 140
LC+ G V A + F + + + P Y L++G R + +A++ + EM +++
Sbjct: 166 LCRNDGTVDAGLKIFLEMPK--RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 141 TPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSG 200
P VVTY +L+ G C + VD A+R ++EM+ +GIEPN Y++++DGL + GR +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 201 MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFS 260
+ E + P MVTYT+L+ G CK ++ A ++L M +G P Y F
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 261 KFGKVEDAMNLYRKMIESGYTPDRLTYHILLKI-------LCKEDKLDLAIQVSKEMKCR 313
K +A N +MI G TP+RLT++I +K LC + A + M+ R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSR 402
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
G ++++T L+ LC+ +F +A ++++ G +P T+K L
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
K AE + M+ EN + ++ GY R+ R ++R+ +M+ +P+ Y TV
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKA-GDLEGASKILKMMISRG 244
+ LVE + + PT+ + L+K C+ G ++ KI M RG
Sbjct: 128 LAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
P TY +FG++++A L+ +M+E P +TY L+ LC +D A+
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ +EMK +G + ++ T + L+ LC+ + +A FE M+ RG P+ +T+
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY------- 300
Query: 365 KKRGMTALAQKLCNVMSSVPRSMELLD 391
T L LC + ++ELLD
Sbjct: 301 -----TTLITGLCK-EQKIQEAVELLD 321
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F LL+ C+ RV A F + + + P V +YN +++G +SK V +A
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQM--VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K+ + P+VVTY +L+ G C R A R+V M K I P+ +N +ID V+ GR
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E E + P +VTY+ L+ G C L+ A ++ M+S+G P TY+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K KVE M L+ +M + G + +TY IL++ C+ KL++A ++ + M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
++ T +L+H LC K ++A DM + G+ +T+ + K G A A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 146/285 (51%), Gaps = 2/285 (0%)
Query: 76 EILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEM 135
ILL+ C+ ++ A + K +L P++ + LLNG+ R V DA + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 136 RKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRF 195
PNVV Y T+++G C+ ++VD A+ L+ M K+GI P+ + YN++I GL +GR+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 196 EEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYF 255
+ + M+ E P + T+ +L+ K G + A + + MI R P TY+
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 256 FRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGC 315
+ ++++A ++ M+ G PD +TY IL+ CK K++ +++ EM RG
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 316 DIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T T+LI CR K + A F M+ G+ P+ +T+ L
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 6/290 (2%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
NILLN + R + A F +M K P++VT+G+L+ G+CR RV A+ + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
G +PN ++YNT+IDGL ++ + + ++ R GP +VTY SL+ G C +G
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A++++ M R P T+N K G+V +A Y +MI PD +TY +L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
LC +LD A ++ M +GC D+ T ++LI+ C+ K + F +M +RG+V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 353 HYLTFKRLNDEFKKRGMTALAQKL------CNVMSSVPRSMELLDSRCKD 396
+ +T+ L + + G +A+++ C V ++ LL C +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 171/354 (48%), Gaps = 12/354 (3%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSL 82
GHE P V TF L+ + R V A++ F+ MV + ++ ++D L
Sbjct: 146 GHE-PSIV---TFGSLLNGFCRGDRVYDALYMFD-----QMVGMGYKPNVVIYNTIIDGL 196
Query: 83 CKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTP 142
CK +V A + ++ ++ P V YN L++G S DA R M K + P
Sbjct: 197 CKSKQVDNALDLLNRMEK--DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 143 NVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+V T+ L++ + RV A +EM + ++P+ + Y+ +I GL R +E M
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 203 ERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKF 262
+ P +VTY+ L+ GYCK+ +E K+ M RG + + TY + + +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 263 GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
GK+ A ++R+M+ G P+ +TY++LL LC K++ A+ + +M+ G D D+ T
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
++I +C+ + +A + + +GL+P T+ + K+G+ A L
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 1 MIKVLAKAKEFDSAWCLL----LDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTF 56
+I L K+K+ D+A LL D IG PD V+ ++ + +G+ + W+
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIG----PDVVTYNSLI--------SGLCSSGRWSD 239
Query: 57 EFANNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELDQSWAPTVRVYN 113
M K F L+D+ K+GRV A E++ + R+ LD P + Y+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD----PDIVTYS 295
Query: 114 ILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKE 173
+L+ G + +AE + M + P+VVTY L+ GYC+ ++V+ ++L EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 174 GIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGA 233
G+ N + Y +I G AG+ + R + C P ++TY L+ G C G +E A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 234 SKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
IL M G TYN R K G+V DA ++Y + G PD TY ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 143/286 (50%), Gaps = 16/286 (5%)
Query: 75 FEILLDSLCKQGRVKAASEYFH--KRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
+ L+ LC GR A+ ++E+ P V +N L++ + V +AE F+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREI----YPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
EM + ++ P++VTY L+ G C R+D A + M +G P+ + Y+ +I+G ++
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 193 GRFEEVSGMMERFLVCEPGP-----TMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
+ E GM L CE VTYT L++GYC+AG L A +I + M+ G P
Sbjct: 340 KKVEH--GMK---LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN GK+E A+ + M ++G D +TY+I+++ +CK ++ A +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPH 353
+ C+G D+ T T ++ L + EA A F M G++P+
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ ++ LL+ + K W +M+ + N+ T L+ +CR ++ A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + ++++G R + M ++ + P +V Y +++ G CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
+ ++ A +L M G P TYN G+ DA + M + PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
++ L+ KE ++ A + +EM R D D+ T ++LI+ LC + DEA F M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+G P +T+ L + + K KL MS
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
Y +L R + D+ + M + P++ + L+ ++++ D I L ++M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
GI N N +++ + + + + P++VT+ SL+ G+C+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A + M+ G+ P+ YN K +V++A++L +M + G PD +TY+ L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC + A ++ M R D+ T LI + + EA +E+MIRR L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 352 PHYLTFKRL 360
P +T+ L
Sbjct: 289 PDIVTYSLL 297
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 21/232 (9%)
Query: 153 GYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERF---LVCE 209
G+C RR +EM + GI RF ++ ++ F + C
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGI------------------RFMKLDDSLDLFFHMVQCR 76
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++ ++ L+ K + + + M G + T N F + ++ A+
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ KMI+ G+ P +T+ LL C+ D++ A+ + +M G ++ +I L
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
C+ + D A M + G+ P +T+ L G + A ++ + M+
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 164/341 (48%), Gaps = 9/341 (2%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD + +T + + R+ RA A + +VK + I+++ LCK+G
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRM-------VVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A K ++ P V +YN +++ KNV DA + EM + + PNVVTY
Sbjct: 237 IDLALSLLKKMEQ--GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ C R A RL+ +M + I PN + ++ +ID V+ G+ E + + +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN + F K +V++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
M L+R+M + G + +TY L+ + + D A V K+M G D+ T ++L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 328 LLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
LC K + A FE + R + P T+ + + K G
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+ L + R A + + + P + Y I++NG + ++ A +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRM--VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + P VV Y T+++ C + V+ A+ L EM +GI PN + YN++I L GR
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + S ++ + + P +VT+++L+ + K G L A K+ MI R P TY+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F ++++A +++ MI P+ +TY+ L+K CK ++D +++ +EM RG
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+ T T LIH + + D A F+ M+ G++P +T+ L D G A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 9/357 (2%)
Query: 10 EFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFD 69
+ D A L D + P V F L+ A+ + I E NL + N
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVE---FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 70 SGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAE 129
+ + IL++ C++ ++ A K +L + P + N LLNG+ + DA
Sbjct: 118 T----YSILINCFCRRSQLSLALAVLAKMMKL--GYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+M + P+ T+ TL+ G R R A+ LV M +G +P+ + Y V++GL
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+ G + ++++ + P +V Y +++ C ++ A + M ++G P+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TYN R +G+ DA L MIE P+ +T+ L+ KE KL A ++ E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKK 366
M R D D+ T + LI+ C + DEA FE MI + P+ +T+ L F K
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 179/386 (46%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D A LL G P V +T + + Y V A+ F +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN---VNDALNLFTEMD 283
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+ LC GR AS +++ P V ++ L++ +
Sbjct: 284 N----KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFV 337
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE+ + EM K ++ P++ TY +L+ G+C R+D A + + M + PN +
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I G +A R +E M +R LV G T VTYT+L+ G+ +A + + A +
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLV---GNT-VTYTTLIHGFFQARECDNAQIV 453
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M+S G LP TY+ GKVE A+ ++ + S PD TY+I+++ +CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K++ + + +G ++ T T ++ CR +EA A F +M G +P T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L + G A + +L M S
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRS 599
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 13/325 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 350
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V YN L+ G+
Sbjct: 351 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGF 406
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V + + EM + + N VTY TL+ G+ + R D A + K+M +G+ P+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ Y+ ++DGL G+ E + E + P + TY +++G CKAG +E +
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ TY F + G E+A L+R+M E G PD TY+ L++ ++
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTM 324
+ ++ +EM R C D ST+
Sbjct: 587 KAASAELIREM--RSCRFVGDASTI 609
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 194/398 (48%), Gaps = 18/398 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
M+ VL K + FD W L++++ +E V+ DT ++RR A++G A+ F
Sbjct: 172 MVDVLGKCRNFDLMW-ELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF---- 226
Query: 61 NLDMVKNFDSGASLFEI--LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
L+M K++ + L+D+L K+ ++ A E F K L + P R +NIL++G
Sbjct: 227 -LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK---LFDTIKPDARTFNILIHG 282
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +++ DA M+ TP+VVTY + VE YC+ R +++EMR+ G PN
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y V+ L ++ + E G+ E+ P Y+SL+ K G + A++I +
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES---GYTPDRLTYHILLKILC 295
M ++G YN + E A+ L ++M + +P+ TY LLK+ C
Sbjct: 403 DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCC 462
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ K+ L + M ID+ T +LI LC K +EA FE+ +R+G+VP
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLDSR 393
T K L DE +K+ M K+ S+ +S ++DS
Sbjct: 523 TCKMLVDELEKKNMAEAKLKI----QSLVQSKTMIDSH 556
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 172/369 (46%), Gaps = 9/369 (2%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
L + + FDS W I VPD + +L + + G+ + +L +
Sbjct: 174 LVRRRRFDSVWVDYQLMISRGLVPDV---HIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
N ++ I + LC+ +++ A + F K+ P + Y+ +++G+ ++ N
Sbjct: 231 KPN----VYIYTIYILDLCRDNKMEEAEKMFELMKK--HGVLPNLYTYSAMIDGYCKTGN 284
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNT 184
V+ A + E+ + PNVV +GTLV+G+C+ R + A L M K G++PN VYN
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 185 VIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG 244
+I G ++G E G++ P + TYT L+ G C + A+++ + M +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 245 FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAI 304
PS TYN + K +E A++L +M SG P+ +T+ L+ C + A+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 305 QVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEF 364
+ EM +G D+ T T LI + EA + DM+ G+ P+ TF L D F
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 365 KKRGMTALA 373
K G ++A
Sbjct: 525 WKEGRLSVA 533
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 176/421 (41%), Gaps = 58/421 (13%)
Query: 1 MIKVLAKAKEFDSAWCL---LLDKIGGHEVPDFVSK----------------DTFVILIR 41
+I VL A ++ A CL L++++ H P +S F +LI
Sbjct: 81 VIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIM 140
Query: 42 RYARAGMVEAAIWT-------------FEFANNLDMVKNFDS---------------GAS 73
+ G+ E A+W N L + FDS
Sbjct: 141 EFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWA----PTVRVYNILLNGWFRSKNVKDAE 129
++ +L KQG Y K K LD+ + P V +Y I + R +++AE
Sbjct: 201 IYFVLFQCCFKQGL------YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE 254
Query: 130 RFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
+ + M+K V PN+ TY +++GYC+ V +A L KE+ + PN +V+ T++DG
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 190 VEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSP 249
+A + + P + Y L+ G+CK+G++ A +L M S P
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 250 TTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKE 309
TY +V +A L++KM P TY+ L+ CKE ++ A+ + E
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 310 MKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLND-EFKKRG 368
M G + ++ T + LI C + A + +M +G+VP +T+ L D FK+
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 369 M 369
M
Sbjct: 495 M 495
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR-VKAASE 93
T+ +I Y + G V A ++ +++ N +F L+D CK V A S
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN----VVVFGTLVDGFCKARELVTARSL 326
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ H K P + VYN L++G +S N+ +A EM N++P+V TY L+ G
Sbjct: 327 FVHMVK---FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
C +V A RL ++M+ E I P++ YN++I G + E+ + P
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
++T+++L+ GYC D++ A + M +G +P TY K +++A+ LY
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M+E+G P+ T+ L+ KE +L +AI +E + + T LI LC+
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 334 KFDEASAEFEDMIRRGLVPHYLTF 357
AS F DM G+ P ++
Sbjct: 564 YILRASRFFSDMRSCGITPDICSY 587
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 133/340 (39%), Gaps = 83/340 (24%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFV--ILIRRYARAGMVEAAIWTFEF 58
++ KA+E +A L + H V V + +V LI + ++G + A+
Sbjct: 310 LVDGFCKARELVTARSLFV-----HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 59 ANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+L N + IL++ LC + +V A+ F K K ++ P+ YN L++G
Sbjct: 365 MESL----NLSPDVFTYTILINGLCIEDQVAEANRLFQKMK--NERIFPSSATYNSLIHG 418
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD----------------- 161
+ + N++ A EM V PN++T+ TL++GYC +R +
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 162 ------------------RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR-------FE 196
A+RL +M + GI PN + ++DG + GR ++
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 197 E----------------VSGMME--------RFLV----CEPGPTMVTYTSLVKGYCKAG 228
E + G+ + RF C P + +Y S++KG+ +
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
+ + MI G LP+ R++ G V+ A
Sbjct: 599 RITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 14/355 (3%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN--FDSGASLFEILLDSLCKQGRVK 89
S TF I+ RYA AG + A+ F L+M ++ F AS F +LD LCK RV+
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLF-----LNMHEHGCFQDLAS-FNTILDVLCKSKRVE 178
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E F + L ++ YN++LNGW K A EM + + PN+ TY T
Sbjct: 179 KAYELF---RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
+++G+ R ++ A EM+K E + + Y TV+ G AG + + + +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P++ TY ++++ CK ++E A + + M+ RG+ P+ TTYN R G+
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-L 328
L ++M G P+ TY+++++ + +++ A+ + ++M C +LDT +LI +
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 329 LCRMYKFDEASAE--FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
R D A +M+ RG +P TF R+ + G A A+++ + S
Sbjct: 416 FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQS 470
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
MR + P+ T+ + E Y + D+A++L M + G + +NT++D L ++ R
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E+ + R L VTY ++ G+C A ++LK M+ RG P+ TTYN
Sbjct: 177 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F + G++ A + +M + D +TY ++ ++ A V EM G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+ T +I +LC+ + A FE+M+RRG P+ T+ L
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 24/281 (8%)
Query: 13 SAWCLLLDKIGGHEV----------PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNL 62
+ WCL+ EV P+ + +T +++ + RAG + A W F L
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNT---MLKGFFRAGQIRHA-WEF----FL 254
Query: 63 DMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+M K + + + ++ G +K A F + + + P+V YN ++ +
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM--IREGVLPSVATYNAMIQVLCK 312
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
NV++A + EM + PNV TY L+ G R L++ M EG EPN
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC---KAGDLEGASKILK 238
YN +I E E+ G+ E+ + P + TY L+ G ++ D+ A K+L
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLL 432
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
M+ RGF+P T+N G A + R +SG
Sbjct: 433 EMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 36/266 (13%)
Query: 129 ERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDG 188
++F L + TPN+V L + + + + +E + +A ++ ID
Sbjct: 43 DQFLLSTKTTPWTPNLVN-SVLKRLWNHGPKALQFFHFLDNHHREYVH-DASSFDLAIDI 100
Query: 189 LVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPS 248
V ++ R GP+ T+ + + Y AG + A K+ M G
Sbjct: 101 AARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQD 160
Query: 249 PTTYNYFFRYFSKFGKVEDAMNLYR----------------------------------K 274
++N K +VE A L+R +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 275 MIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYK 334
M+E G P+ TY+ +LK + ++ A + EMK R C+ID+ T T ++H +
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 335 FDEASAEFEDMIRRGLVPHYLTFKRL 360
A F++MIR G++P T+ +
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAM 306
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 15/349 (4%)
Query: 11 FDSAWCLLLDKIGGHEVP---DFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN 67
F+ A+ L + + +P DF T +RRY E I+ F+ +++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRY------ETVIY---FSQKMELY-G 101
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F IL+ C+ R+ A K +L + P++ + LL+G+ + D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL--GYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + M K PNVV Y TL++G C+ ++ A+ L+ EM K+G+ + + YNT++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL +GR+ + + M+ + P +VT+T+L+ + K G+L+ A ++ K MI P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
+ TYN G++ DA + M G P+ +TY+ L+ CK +D +++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
+ M C G + D+ T LIH C++ K A F M+ R + P +T
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 10/318 (3%)
Query: 31 VSKD--TFVILIRRYARAGMVEAAIWTFEFANNLDMVK-NFDSGASLFEILLDSLCKQGR 87
+S D +F ILI + R + A+ M+K ++ F LL C R
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLG-----KMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A + + P V VYN L++G ++ + A EM K+ + +VVTY
Sbjct: 157 IGDAFSLVILM--VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
TL+ G C R A R++++M K I P+ + + +ID V+ G +E + + +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 208 CEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVED 267
P VTY S++ G C G L A K +M S+G P+ TYN F KF V++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 268 AMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH 327
M L+++M G+ D TY+ L+ C+ KL +A+ + M R D+ T +L+H
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 328 LLCRMYKFDEASAEFEDM 345
LC + + A +F+DM
Sbjct: 395 GLCVNGEIESALVKFDDM 412
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 7/297 (2%)
Query: 64 MVKN-FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRS 122
MVK+ ++ ++ L+D LCK G + A E ++ ++ + V YN LL G S
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK--KGLGADVVTYNTLLTGLCYS 224
Query: 123 KNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVY 182
DA R +M K ++ P+VVT+ L++ + + +D A L KEM + ++PN + Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 183 NTVIDGLVEAGRFEEVSGMMERFLVCEPG--PTMVTYTSLVKGYCKAGDLEGASKILKMM 240
N++I+GL GR + + L+ G P +VTY +L+ G+CK ++ K+ + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
GF TYN + + GK+ A++++ M+ TPD +T+ ILL LC ++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+ A+ +M+ I + ++IH LC+ K ++A F + G+ P T+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 94 YFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
YF ++ EL + + + IL++ + R + A +M K P++VT+G+L+ G
Sbjct: 92 YFSQKMEL-YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHG 150
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C + R+ A LV M K G EPN +VYNT+IDGL + G ++ G
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
+VTY +L+ G C +G A+++L+ M+ R P T+ F K G +++A LY+
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+MI+S P+ +TY+ ++ LC +L A + M +GC ++ T LI C+
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
DE F+ M G T+ L + + G +A
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ + LL + + F +M ++ ++ ++ L+ +CR R+ A+ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + + +++ G R + ++ + P +V Y +L+ G CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G+L A ++L M +G TYN G+ DA + R M++ PD +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ L+ + K+ LD A ++ KEM D + T +I+ LC + +A F+ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMS 381
+G P+ +T+ L F K M KL MS
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 35/262 (13%)
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
L G+ S +DA + EM P++V + L+ LRR + I ++M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
I + + ++T L+ +C+ L A
Sbjct: 102 ISHD-----------------------------------LYSFTILIHCFCRCSRLSFAL 126
Query: 235 KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKIL 294
+L M+ G+ PS T+ F ++ DA +L M++SGY P+ + Y+ L+ L
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 295 CKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
CK +L++A+++ EM+ +G D+ T L+ LC ++ +A+ DM++R + P
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 355 LTFKRLNDEFKKRGMTALAQKL 376
+TF L D F K+G AQ+L
Sbjct: 247 VTFTALIDVFVKQGNLDEAQEL 268
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQG 86
PD V TF LI + + G ++ A ++ +M+++ D + +++ LC G
Sbjct: 244 PDVV---TFTALIDVFVKQGNLDEAQELYK-----EMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
R+ A + F + P V YN L++G+ + + V + + + M E ++ T
Sbjct: 296 RLYDAKKTFDLMAS--KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV------------------------- 181
Y TL+ GYC++ ++ A+ + M + P+ I
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 182 ----------YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
YN +I GL +A + E+ + R V P TYT ++ G CK G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 232 GASKILKMMISRGFL 246
A ++++ M G +
Sbjct: 474 EADELIRRMKEEGII 488
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 139/273 (50%)
Query: 112 YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMR 171
YNI++N R A +M K P+VVT +L+ G+C+ RV AI LV +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 172 KEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLE 231
+ G P+ ++YNT+IDG + G + + +R VTY SLV G C +G
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 232 GASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILL 291
A+++++ M+ R +P+ T+ F K GK +AM LY +M PD TY+ L+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 292 KILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLV 351
LC ++D A Q+ M +GC D+ T LI+ C+ + DE + F +M +RGLV
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 352 PHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVP 384
+T+ + + + G AQ++ + M S P
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 140/268 (52%), Gaps = 5/268 (1%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ C+ RV A + K +E+ + P V +YN +++G + V DA + M +
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEM--GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+ V + VTY +LV G C R A RL+++M I PN I + VID V+ G+F E
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ E P + TY SL+ G C G ++ A ++L +M+++G LP TYN
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K +V++ L+R+M + G D +TY+ +++ + + D A ++ M R
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 379
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDM 345
++ T ++L++ LC ++ ++A FE+M
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENM 407
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 5/300 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F ++ ++D CK G V A E F R E D A V YN L+ G S D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFD-RMERDGVRADAV-TYNSLVAGLCCSGRWSD 227
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A R +M ++ PNV+T+ +++ + + + A++L +EM + ++P+ YN++I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
GL GR +E M++ + P +VTY +L+ G+CK+ ++ +K+ + M RG +
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
TYN + + + G+ + A ++ +M P+ TY ILL LC +++ A+ +
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKR 367
+ M+ ++D+ T ++IH +C++ ++A F + +GL P +++ + F ++
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ I+++ LC+ R A K + + P V + L+NG+ + V DA +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKF--GYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VV Y T+++G C++ V+ A+ L M ++G+ +A+ YN+++ GL +GR
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + + +M ++ + P ++T+T+++ + K G A K+ + M R P TYN
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
G+V++A + M+ G PD +TY+ L+ CK ++D ++ +EM RG
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
D T +I + + D A F M R + Y
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 46 AGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKAASEYFHK--RKELD 102
AG+ + W+ DMV ++ F ++D K+G+ A + + + R+ +D
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
P V YN L+NG V +A++ M + P+VVTY TL+ G+C+ +RVD
Sbjct: 277 ----PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
+L +EM + G+ + I YNT+I G +AGR + + R + P + TY+ L+
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLY 389
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL----------- 271
G C +E A + + M TTYN K G VEDA +L
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 272 ------------------------YRKMIESGYTP 282
YRKM E G P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%)
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
S N+++ + +M + P++V + ++ + + D I L M GI +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMI 241
YN VI+ L RF ++ + + P +VT +SL+ G+C+ + A ++ M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 242 SRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLD 301
GF P YN K G V DA+ L+ +M G D +TY+ L+ LC +
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 302 LAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLN 361
A ++ ++M R ++ T T +I + + KF EA +E+M RR + P T+ L
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 362 DEFKKRGMTALAQKLCNVM 380
+ G A+++ ++M
Sbjct: 287 NGLCMHGRVDEAKQMLDLM 305
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I K+K D L + V D ++ +T +I+ Y +AG +AA E +
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT---IIQGYFQAGRPDAAQ---EIFS 373
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRK----ELDQSWAPTVRVYNILL 116
+D N + + ILL LC RV+ A F + ELD + YNI++
Sbjct: 374 RMDSRPNIRT----YSILLYGLCMNWRVEKALVLFENMQKSEIELD------ITTYNIVI 423
Query: 117 NGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
+G + NV+DA + + + + P+VV+Y T++ G+CR R+ D++ L ++M+++G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 177 P 177
P
Sbjct: 484 P 484
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASL-FEILLDSLCKQ 85
+PD V+ +T LI + ++ V+ F +M + G ++ + ++ +
Sbjct: 311 LPDVVTYNT---LINGFCKSKRVDEGTKLFR-----EMAQRGLVGDTITYNTIIQGYFQA 362
Query: 86 GRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVV 145
GR AA E F + P +R Y+ILL G + V+ A + M+K + ++
Sbjct: 363 GRPDAAQEIFSRMDS-----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGL 189
TY ++ G C++ V+ A L + + +G++P+ + Y T+I G
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ +++ LCK+G + A K ++ V +Y +++ KNV DA + E
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A RL+ +M + I PN + ++ +ID V+ G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
E + + + P + TY+SL+ G+C L+ A + ++MIS+ P+ TYN
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VE+ M L+R+M + G + +TY+ L++ L + D+A ++ K+M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
D+ T ++L+ LC+ K ++A FE + + + P T+ + + K G
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D+LC V A F E+D + P V YN L+ DA R
Sbjct: 257 IYTTIIDALCNYKNVNDALNLF---TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R +E M E + + P +VTY +L+KG+CKA +E ++ + M RG + + TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
N + + G + A +++KM+ G PD +TY ILL LCK KL+ A+ V + ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ D+ T ++I +C+ K ++ F + +G+ P+ + + + F ++G+
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 373 AQKL 376
A L
Sbjct: 554 ADAL 557
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 8/324 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + ++ + P +N L++G F +A M
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVME--YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++ TYGT+V G C+ +D A+ L+K+M K IE + ++Y T+ID L +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ P +VTY SL++ C G AS++L MI R P+ T++
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ +A LY +MI+ PD TY L+ C D+LD A + + M + C
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T LI C+ + +E F +M +RGLV + +T+ L + G +AQK+
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 378 NVMSS--VPRSM----ELLDSRCK 395
M S VP + LLD CK
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCK 477
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 17/386 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ L K + D A LL G D V T + + Y V A+ F +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN---VNDALNLFTEMD 282
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
N K + L+ LC GR AS +++ P V ++ L++ +
Sbjct: 283 N----KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFV 336
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
+ + +AE+ + EM K ++ P++ TY +L+ G+C R+D A + + M + PN +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 181 VYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKI 236
YNT+I G +A R EE M +R LV G T VTY +L++G +AGD + A KI
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLV---GNT-VTYNTLIQGLFQAGDCDMAQKI 452
Query: 237 LKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCK 296
K M+S G P TY+ K+GK+E A+ ++ + +S PD TY+I+++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 297 EDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLT 356
K++ + + +G ++ T +I CR +EA A F +M G +P+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 357 FKRLNDEFKKRGMTALAQKLCNVMSS 382
+ L + G A + +L M S
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRS 598
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++ C + V+ A+ L
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +GI PN + YN++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ +++ +EM RG + T LI L + D A F+ M+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D K G
Sbjct: 458 SDGVPPDIITYSILLDGLCKYG 479
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 159/330 (48%), Gaps = 11/330 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I+ L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 349
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V YN L+ G+
Sbjct: 350 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGF 405
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL++G + D A ++ K+M +G+ P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
I Y+ ++DGL + G+ E+ + E + P + TY +++G CKAG +E +
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ Y F + G E+A L+R+M E G P+ TY+ L++ ++
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ ++ KEM+ G D T +M+I++L
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINML 615
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 206/392 (52%), Gaps = 21/392 (5%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAI---WTFE 57
M+ +L + ++FD W LL++ + +S T +++ R A+ V + W F+
Sbjct: 114 MLYILGRNRKFDQIWELLIET--KRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFK 171
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
+V +F A F LL +LC++ + A +H L + P ++ +NILL+
Sbjct: 172 -----RLVPDFFDTAC-FNALLRTLCQEKSMTDARNVYH---SLKHQFQPDLQTFNILLS 222
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
GW K+ ++AE F+ EM+ + + P+VVTY +L++ YC+ R +++A +L+ +MR+E P
Sbjct: 223 GW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ I Y TVI GL G+ ++ +++ P + Y + ++ +C A L A K++
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
M+ +G P+ TTYN FFR S + + LY +M+ + P+ + L+K+ +
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 399
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+K+D+A+++ ++M +G S +L+ LLC + K +EA +M+ +G P ++F
Sbjct: 400 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Query: 358 KRLNDEF----KKRGMTALAQKLCNVMSSVPR 385
KR+ K + L QK+ + +PR
Sbjct: 460 KRIKLLMELANKHDEVNNLIQKMAIFSTEIPR 491
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 11/382 (2%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDF-VSKDTFVILIRRYARAGMVEAAIWTFEFA 59
++++L +K+F W L++ E F +S F I+ R Y+RA + A F
Sbjct: 108 LVEILGSSKQFALLWDFLIE---AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRM 164
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ D + LL SLC + V A E+F K K P+ + Y+IL+ GW
Sbjct: 165 VEFGIKPCVDD----LDQLLHSLCDKKHVNHAQEFFGKAKGF--GIVPSAKTYSILVRGW 218
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ A + + EM + N +++ Y L++ C+ VD ++ +EM G++P+A
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ I +AG +++R + P + T+ ++K CK ++ A +L
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
MI +G P TYN Y +V A L +M + PDR TY+++LK+L + +
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY-KFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ + M R + T T++IH L R K +EA FE MI G+ P+ T +
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVE 458
Query: 359 RLNDEFKKRGMTALAQKLCNVM 380
L + G + L M
Sbjct: 459 MLRNRLVGWGQMDVVDVLAGKM 480
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 7/281 (2%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAA 91
S T+ IL+R +AR A F+ + V + + + LLD+LCK G V
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLA----YNALLDALCKSGDVDGG 262
Query: 92 SEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLV 151
+ F + L P + I ++ + + +V A + M++ ++ PNV T+ ++
Sbjct: 263 YKMFQEMGNL--GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 152 EGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPG 211
+ C+ +VD A L+ EM ++G P+ YN+++ + + ++ R +
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR-YFSKFGKVEDAMN 270
P TY ++K + G + A++I + M R F P+ TY K GK+E+A
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+ MI+ G P T +L L ++D+ ++ +M+
Sbjct: 441 YFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 179/405 (44%), Gaps = 21/405 (5%)
Query: 1 MIKVLAKAKEFDSAWCL--LLDKIG-GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFE 57
++ +AK K+FD L + ++G H + T+ ILI + R + A+
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLY------TYNILINCFCRRSQISLALALLG 69
Query: 58 FANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLN 117
L ++ LL+ C R+ A + E+ + P + L++
Sbjct: 70 KMMKL----GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM--GYRPDTITFTTLIH 123
Query: 118 GWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEP 177
G F +A M + PN+VTYG +V G C+ +D A L+ +M IE
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 178 NAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKIL 237
+ +++NT+ID L + ++ + + P +VTY+SL+ C G AS++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 238 KMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
MI + P+ T+N F K GK +A L+ MI+ PD TY+ L+ C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
D+LD A Q+ + M + C DLDT LI C+ + ++ + F +M RGLV +T+
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 358 KRLNDEFKKRGMTALAQKLCNVMSS--VPRSME----LLDSRCKD 396
L G AQK+ M S VP + LLD C +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ ++++ LCK+G + A +K + V ++N +++ + ++V DA + E
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEA--AKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + + PNVVTY +L+ C R A +L+ +M ++ I PN + +N +ID V+ G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
F E + + + P + TY SL+ G+C L+ A ++ + M+S+ P TYN
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ F K +VED L+R+M G D +TY L++ L + D A +V K+M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDM 345
D+ T ++L+ LC K ++A F+ M
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 167/334 (50%), Gaps = 11/334 (3%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
P+ V T+ +++ + G ++ A F N ++ K ++ +F ++DSLCK
Sbjct: 148 PNLV---TYGVVVNGLCKRGDIDLA---FNLLNKMEAAK-IEADVVIFNTIIDSLCKYRH 200
Query: 88 VKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVT 146
V A F KE++ + P V Y+ L++ DA + +M ++ + PN+VT
Sbjct: 201 VDDALNLF---KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 147 YGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFL 206
+ L++ + + + A +L +M K I+P+ YN++I+G R ++ M E +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 207 VCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVE 266
+ P + TY +L+KG+CK+ +E +++ + M RG + TY + G +
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 267 DAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI 326
+A ++++M+ G PD +TY ILL LC KL+ A++V M+ +D+ T +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 327 HLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+C+ K D+ F + +G+ P+ +T+ +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y +++NG + ++ A +M + +VV + T+++ C+ R VD A+ L
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
KEM +GI PN + Y+++I L GR+ + S ++ + + P +VT+ +L+ + K
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G A K+ MI R P TYN F +++ A ++ M+ PD T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ L+K CK +++ ++ +EM RG D T T LI L D A F+ M+
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 347 RRGLVPHYLTFKRLNDEFKKRG 368
G+ P +T+ L D G
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNG 409
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 10/312 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS+ +++ P + +N L++ + + +AE+ +
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDM--IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D+A ++ + M + P+ YNT+I G ++ R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 195 FEEVSG----MMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
E+ + M R LV G T VTYT+L++G GD + A K+ K M+S G P
Sbjct: 341 VEDGTELFREMSHRGLV---GDT-VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TY+ GK+E A+ ++ M +S D Y +++ +CK K+D + +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+G ++ T +I LC EA A + M G +P T+ L + G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 371 ALAQKLCNVMSS 382
A + +L M S
Sbjct: 517 AASAELIREMRS 528
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 17/348 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAG-MVEAAIWTFEFA 59
+I L + A LL D I P+ V TF LI + + G VEA
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLV---TFNALIDAFVKEGKFVEAEKL----- 277
Query: 60 NNLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNG 118
+ DM+K + D + L++ C R+ A + F + + P + YN L+ G
Sbjct: 278 -HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM--VSKDCFPDLDTYNTLIKG 334
Query: 119 WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPN 178
+ +SK V+D + EM + + VTY TL++G D A ++ K+M +G+ P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 179 AIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILK 238
+ Y+ ++DGL G+ E+ + + E + YT++++G CKAG ++ +
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 239 MMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKED 298
+ +G P+ TYN +++A L +KM E G PD TY+ L++ ++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 299 KLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ ++ +EM R C D ST I L+ M F DM+
Sbjct: 515 DKAASAELIREM--RSCRFVGDAST--IGLVANMLHDGRLDKSFLDML 558
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K P++ + L+ ++++ D I L ++M++ GI N YN +I+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
++ + + P++VT +SL+ GYC + A ++ M+ G+ P T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDL------------ 302
K +A+ L +M++ G P+ +TY +++ LCK +DL
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 303 -----------------------AIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEAS 339
A+ + KEM+ +G ++ T + LI LC ++ +AS
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 340 AEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
DMI + + P+ +TF L D F K G A+KL + M + RS++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSID 287
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++ + L+ K + + + M G + TYN F + ++ A+
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
L KM++ GY P +T LL C ++ A+ + +M G D T T LIH L
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME- 388
K EA A + M++RG P+ +T+ + + KRG LA L N M + +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 389 -----LLDSRCK 395
++DS CK
Sbjct: 186 VIFNTIIDSLCK 197
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 157/297 (52%), Gaps = 6/297 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR---SKNVKDAERF 131
F +++++LCK G++ A + K +P V YN L++G+ + + + A+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVY--GCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
EM + +V+PN+ T+ L++G+ + + ++++ KEM + ++PN I YN++I+GL
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
G+ E M ++ + P ++TY +L+ G+CK L+ A + + +G +P+
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN + K GK++D L +M G PD TY+ L+ LC+ ++ A ++ ++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
+G DL T +L+ CR + +A+ ++M + GL P +LT+ + + K G
Sbjct: 464 SKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 182/374 (48%), Gaps = 18/374 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLD-KIGGHEVPDFVSKDTFVILIRRYARAG----MVEAAIWT 55
+I L K + + A ++ D K+ G P+ VS +T LI Y + G M +A
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCS-PNVVSYNT---LIDGYCKLGGNGKMYKADAVL 284
Query: 56 FEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNIL 115
E N D+ N + F IL+D K + + + F ++ LDQ P V YN L
Sbjct: 285 KEMVEN-DVSPNLTT----FNILIDGFWKDDNLPGSMKVF--KEMLDQDVKPNVISYNSL 337
Query: 116 LNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGI 175
+NG + +A +M V PN++TY L+ G+C+ + A+ + ++ +G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 176 EPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASK 235
P +YN +ID + G+ ++ + E P + TY L+ G C+ G++E A K
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 236 ILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
+ + S+G LP T++ + + G+ A L ++M + G P LTY+I++K C
Sbjct: 458 LFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 296 KEDKLDLAIQVSKEM-KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHY 354
KE L A + +M K R +++ + +L+ + K ++A+ +M+ +GLVP+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 355 LTFKRLNDEFKKRG 368
+T++ + +E +G
Sbjct: 577 ITYEIVKEEMVDQG 590
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 9/316 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L+ +L K+ R A EY +K + + + P V +N+++N ++ + A +M+
Sbjct: 194 LMIALLKENR-SADVEYVYK-EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 138 ENVTPNVVTYGTLVEGYCRL---RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+PNVV+Y TL++GYC+L ++ +A ++KEM + + PN +N +IDG +
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+ + L + P +++Y SL+ G C G + A + M+S G P+ TYN
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F K +++A++++ + G P Y++L+ CK K+D + +EM+ G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ T LI LCR + A F+ + +GL P +TF L + + ++G + A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 375 KLCNVMSSV---PRSM 387
L MS + PR +
Sbjct: 491 MLLKEMSKMGLKPRHL 506
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
+NV N + LV Y R + K G + +A+ ++ L++ R +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
V + + + + P + T+ ++ CK G + A +++ M G P+ +YN
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 258 YFSKF---GKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ K GK+ A + ++M+E+ +P+ T++IL+ K+D L +++V KEM +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGM 369
++ + LI+ LC K EA + + M+ G+ P+ +T+ L + F K M
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 27 VPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQG 86
VPD T+ LI R G +EAA F+ + F IL++ C++G
Sbjct: 433 VPDV---GTYNCLIAGLCRNGNIEAAKKLFD-----QLTSKGLPDLVTFHILMEGYCRKG 484
Query: 87 RVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKEN-VTPNVV 145
+ A+ + ++ P YNI++ G+ + N+K A +M KE + NV
Sbjct: 485 ESRKAAMLLKEMSKM--GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 146 TYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMM 202
+Y L++GY + +++ A L+ EM ++G+ PN I Y V + +V+ G ++ G +
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 38/340 (11%)
Query: 67 NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVK 126
F G + ++++LCK G +AA + K L + + LL G+ R N++
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI--LKIGFVLDSHIGTSLLLGFCRGLNLR 247
Query: 127 DAERFWLEMRKE-NVTPNVVTYGTLVEGYCRLRR-------------------------- 159
DA + + M KE PN V+Y L+ G C + R
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 160 ---------VDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+D+A L EM G +PN Y +IDGL G+ EE +G+ + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
P+++TY +L+ GYCK G + A ++L +M R P+ T+N + GK A++
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLC 330
L ++M+++G +PD ++Y++L+ LC+E ++ A ++ M C + D T T +I+ C
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 331 RMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMT 370
+ K D ASA M+R+G+ +T L D K G T
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 177/396 (44%), Gaps = 45/396 (11%)
Query: 32 SKDTFVILIRRYARAGMVEAAIWTFEFANNLDMV-KNFDSGASLFEILLDSLCKQGRVKA 90
S T+ +LI+ G+++ A F+ +M+ + + +L+D LC+ G+++
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFD-----EMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A+ RK + P+V YN L+NG+ + V A M K PNV T+ L
Sbjct: 355 ANGVC--RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
+EG CR+ + +A+ L+K M G+ P+ + YN +IDGL G ++ +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRG-------------------------- 244
P +T+T+++ +CK G + AS L +M+ +G
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 245 ---------FLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILC 295
L +P + N SK KV++ + + K+ + G P +TY L+ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 296 KEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
+ + + ++ + MK GC ++ T++I+ LC+ + +EA M G+ P+++
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
T+ + + G L + L V + V R EL D
Sbjct: 653 TYTVMVKGYVNNG--KLDRALETVRAMVERGYELND 686
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 162/401 (40%), Gaps = 61/401 (15%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD VS + +LI R G + A N D+ + F ++++ CKQG+
Sbjct: 439 PDIVS---YNVLIDGLCREGHMNTAYKLLSSMNCFDI----EPDCLTFTAIINAFCKQGK 491
Query: 88 VKAASEYF----HKRKELDQSWAPTV-----------------------------RVYNI 114
AS + K LD+ T+ N+
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 115 LLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG 174
+L+ + VK+ ++ K + P+VVTY TLV+G R + + R+++ M+ G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 175 IEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGAS 234
PN Y +I+GL + GR EE ++ P VTYT +VKGY G L+ A
Sbjct: 612 CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Query: 235 KILKMMISRGFLPSPTTYNYFFRYF---------SKFGKVED---------AMNLYRKMI 276
+ ++ M+ RG+ + Y+ + F S+ V D +N ++
Sbjct: 672 ETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVV 731
Query: 277 ES-GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKF 335
E G L ++ + LCKE + D + + + + RG ++ +++ C K
Sbjct: 732 EQLGGCISGLCIFLVTR-LCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKH 789
Query: 336 DEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
+ +++ G VP + +F + KK G A++L
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFL--------------------------- 246
M+ Y ++V CK G E A + ++ GF+
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 247 ---------PSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKE 297
P+ +Y+ + G++E+A L +M E G P TY +L+K LC
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 298 DKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTF 357
+D A + EM RGC ++ T T+LI LCR K +EA+ M++ + P +T+
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 358 KRLNDEFKKRGMTALAQKLCNVM 380
L + + K G A +L VM
Sbjct: 375 NALINGYCKDGRVVPAFELLTVM 397
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 29/258 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+D L + G + + K P V Y I++NG + V++AE+
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKL--SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ V+PN VTY +V+GY ++DRA+ V+ M + G E N +Y++++ G V + +
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Query: 195 ----------------------FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
E+ ++E+ C G + T L CK G +
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRL----CKEGRTDE 757
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
++ +++ ++ RG Y SK K M L +++SG+ P ++ ++++
Sbjct: 758 SNDLVQNVLERGVFLEKAMDIIMESYCSK-KKHTKCMELITLVLKSGFVPSFKSFCLVIQ 816
Query: 293 ILCKEDKLDLAIQVSKEM 310
L KE + A ++ E+
Sbjct: 817 GLKKEGDAERARELVMEL 834
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 46/169 (27%)
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLA-IQVSKEMK-----------------CR 313
YR+M G+ + Y ++ LCK + A + +SK +K CR
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 314 G------------------CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYL 355
G C + + ++LIH LC + + +EA + M +G P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 356 TFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME--------LLDSRCKD 396
T+ L RG+ A L + M +PR + L+D C+D
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEM--IPRGCKPNVHTYTVLIDGLCRD 349
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 75 FEILLDSLCKQGRVKAAS---EYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERF 131
+ L++ CK+G ++ A E RK +P R YN L+ G+ +S NV A
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRK-----LSPNTRTYNELIKGYCKS-NVHKAMGV 449
Query: 132 WLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVE 191
+M + V P+VVTY +L++G CR D A RL+ M G+ P+ Y ++ID L +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 192 AGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTT 251
+ R EE + + P +V YT+L+ GYCKAG ++ A +L+ M+S+ LP+ T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
+N GK+++A L KM++ G P T IL+ L K+ D A ++M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTA 371
G D T T I CR + +A M G+ P T+ L + G T
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 372 LA 373
A
Sbjct: 690 FA 691
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 40/361 (11%)
Query: 75 FEILLDSLCKQGRVKAASEYFHK----------------------RKELDQSWAPTVRV- 111
+ +++ CK G V+ A++Y K RK+LD ++ +
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 112 ----------YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVD 161
Y L++G ++ + +A +++M+ + P V TY L++ C R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 162 RAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLV 221
A+ LVKEM + GI+PN Y +ID L +FE+ ++ + L P ++TY +L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 222 KGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYT 281
GYCK G +E A ++++M SR P+ TYN + + K V AM + KM+E
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
Query: 282 PDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAE 341
PD +TY+ L+ C+ D A ++ M RG D T T +I LC+ + +EA
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 342 FEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS---VPRSM---ELLDSRCK 395
F+ + ++G+ P+ + + L D + K G A + M S +P S+ L+ C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 396 D 396
D
Sbjct: 580 D 580
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 53/408 (12%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L +F+ A LL + +P+ + T+ LI Y + GM+E A+ E
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVI---TYNALINGYCKRGMIEDAVDVVELME 420
Query: 61 NLDMVKNFDSGASL------------------------------FEILLDSLCKQGRVKA 90
+ + N + L + L+D C+ G +
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 91 ASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTL 150
A D+ P Y +++ +SK V++A + + ++ V PNVV Y L
Sbjct: 481 AYRLLSLMN--DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 151 VEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEP 210
++GYC+ +VD A ++++M + PN++ +N +I GL G+ +E + + E+ +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 211 GPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMN 270
PT+ T T L+ K GD + A + M+S G P TY F + + + G++ DA +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 271 LYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLI-HLL 329
+ KM E+G +PD TY L+K + + A V K M+ GC+ T LI HLL
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 330 -----------------CRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
M +FD E M+ + P+ ++++L
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 9/327 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ LL+SL + G V + + + L+ P + YN ++NG+ + NV++A ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEM--LEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
+ + + P+ TY +L+ GYC+ + +D A ++ EM +G N + Y +I GL A R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E + + E PT+ TYT L+K C + A ++K M G P+ TY
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K E A L +M+E G P+ +TY+ L+ CK ++ A+ V + M+ R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ T LI C+ +A M+ R ++P +T+ L D + G A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 375 KLCNVMSS---VPRS---MELLDSRCK 395
+L ++M+ VP ++DS CK
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 178/403 (44%), Gaps = 36/403 (8%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEV-PDFVSKDTFVILIRRYARAGMVEAAIWTFEFA 59
MI L K+K + A C L D + V P+ V + LI Y +AG V+ A E
Sbjct: 503 MIDSLCKSKRVEEA-CDLFDSLEQKGVNPNVV---MYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 60 NNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+ KN + F L+ LC G++K A+ + K + PTV IL++
Sbjct: 559 ----LSKNCLPNSLTFNALIHGLCADGKLKEAT--LLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
+ + A + +M P+ TY T ++ YCR R+ A ++ +MR+ G+ P+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYC--KAGDLEGAS--- 234
Y+++I G + G+ +++R P+ T+ SL+K K G +G+
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 235 -------------KILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES-GY 280
++L+ M+ P+ +Y + G + A ++ M + G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDE--- 337
+P L ++ LL CK K + A +V +M C G L++ +LI C +YK E
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI---CGLYKKGEKER 849
Query: 338 ASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
++ F+++++ G L +K + D K+G+ +L NVM
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEM-RKEGIEPNAIVYNTVIDGLVEA 192
+M + +VTPN +Y L+ G C + + A ++ M R EGI P+ +V+N ++ +
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
+ E + +++ + P + + L+ G K G+ E + + + ++ G+ +
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
K G VE L+ M ++G TY +L++
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 2/286 (0%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F IL++ LC +G + +S K ++ +APT+ YN +L+ + + K A
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEK--SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M+ + V +V TY L+ CR R+ + L+++MRK I PN + YNT+I+G G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
S ++ L P VT+ +L+ G+ G+ + A K+ MM ++G PS +Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
K + + A Y +M +G R+TY ++ LCK LD A+ + EM G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D D+ T + LI+ C++ +F A + R GL P+ + + L
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 14/343 (4%)
Query: 38 ILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHK 97
ILIR Y R GM++ ++ F + F+ +L S+ K G + S +
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMG----LYGFNPSVYTCNAILGSVVKSG--EDVSVWSFL 181
Query: 98 RKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRL 157
++ L + P V +NIL+N + + + +M K P +VTY T++ YC+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 158 RRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE----VSGMMERFLVCEPGPT 213
R AI L+ M+ +G++ + YN +I L + R + + M +R + P
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI----HPN 297
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
VTY +L+ G+ G + AS++L M+S G P+ T+N G ++A+ ++
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
M G TP ++Y +LL LCK + DLA MK G + T T +I LC+
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
DEA +M + G+ P +T+ L + F K G A+++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 8/328 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L++ +G+V AS+ ++ L +P +N L++G N K+A + +
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEM--LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + +TP+ V+YG L++G C+ D A M++ G+ I Y +IDGL + G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNY 254
+E ++ P +VTY++L+ G+CK G + A +I+ + G P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
+ G +++A+ +Y MI G+T D T+++L+ LCK K+ A + + M G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
+ + LI+ + +A + F++M + G P + T+ L K G A+
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 375 KLCNVMSSVPRSME------LLDSRCKD 396
K + +VP +++ LL + CK
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
TF LI + G + A+ F K + +LLD LCK A +
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMME----AKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 95 FHKRKELDQSWAPTVRV-YNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEG 153
+ + K ++ R+ Y +++G ++ + +A EM K+ + P++VTY L+ G
Sbjct: 391 YMRMK---RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 154 YCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPT 213
+C++ R A +V + + G+ PN I+Y+T+I G +E + E ++
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 214 MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYR 273
T+ LV CKAG + A + ++ M S G LP+ +++ + G+ A +++
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 274 KMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMY 333
+M + G+ P TY LLK LCK L A + K + +D L+ +C+
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 334 KFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
+A + F +M++R ++P T+ L ++G T +A
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 51/384 (13%)
Query: 5 LAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDM 64
+A+A+EF C+ D I +P+ VS D LI Y +G A F+ +
Sbjct: 524 VAEAEEF--MRCMTSDGI----LPNTVSFDC---LINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 65 VKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKN 124
F + SL L LCK G ++ A E F K + TV +YN LL +S N
Sbjct: 575 HPTFFTYGSL----LKGLCKGGHLREA-EKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGN 628
Query: 125 VKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEG-IEPNAIVYN 183
+ A + EM + ++ P+ TY +L+ G CR + AI KE G + PN ++Y
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 184 TVIDGLVEAG-----------------------------------RFEEVSGMMERFLVC 208
+DG+ +AG + E+ + ++
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 209 EPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDA 268
GP + TY L+ GY K D+ + + + +I G LP T + + +E
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 269 MNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHL 328
+ + + I G DR T+++L+ C +++ A + K M G +D DT ++ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 329 LCRMYKFDEASAEFEDMIRRGLVP 352
L R ++F E+ +M ++G+ P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISP 892
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 13/342 (3%)
Query: 31 VSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKN-FDSGASLFEILLDSLCKQGRVK 89
V + T+ +I + G ++ A+ +M K+ D + L++ CK GR K
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLN-----EMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 90 AASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGT 149
A E + + S P +Y+ L+ R +K+A R + M E T + T+
Sbjct: 456 TAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 150 LVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCE 209
LV C+ +V A ++ M +GI PN + ++ +I+G +G + + +
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
PT TY SL+KG CK G L A K LK + + YN K G + A+
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+L+ +M++ PD TY L+ LC++ K +AI +KE + RG L M +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN--VLPNKVMYTCFV 691
Query: 330 CRMYKFDEASAEF---EDMIRRGLVPHYLTFKRLNDEFKKRG 368
M+K + A E M G P +T + D + + G
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 12/393 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
++ + K+ A L + + +PD T+ LI R G AI FA
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPD---SYTYTSLISGLCRKGKTVIAIL---FAK 672
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQ-SWAPTVRVYNILLNGW 119
+ N ++ +D + K G+ KA YF R+++D P + N +++G+
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YF--REQMDNLGHTPDIVTTNAMIDGY 729
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
R ++ EM +N PN+ TY L+ GY + + V + L + + GI P+
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ ++++ G+ E+ E +++ F+ T+ L+ C G++ A ++K+
Sbjct: 790 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV 849
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M S G T + ++ + +++ + +M + G +P+ Y L+ LC+
Sbjct: 850 MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 909
Query: 300 LDLAIQVSKEMKCRG-CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ A V +EM C ++ S M + L + K DEA+ M++ LVP +F
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAM-VRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSVPRSMELLD 391
L K G A +L VMS+ ++L+
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1001
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 212 PTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNL 271
P++ T +++ K+G+ LK M+ R P T+N G E + L
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 272 YRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCR 331
+KM +SGY P +TY+ +L CK+ + AI++ MK +G D D+ T MLIH LCR
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 332 MYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ + DM +R + P+ +T+ L + F G +A +L N M S
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 148/389 (38%), Gaps = 42/389 (10%)
Query: 36 FVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYF 95
+ LI R G ++ AI +E +++ F +L+ SLCK G+V A E+
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 96 HKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYC 155
R P ++ L+NG+ S A + EM K P TYG+L++G C
Sbjct: 532 --RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
+ + A + +K + + ++YNT++ + ++G + + + P
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 216 TYTSLVKGYC------------------------------------KAGDLEGASKILKM 239
TYTSL+ G C KAG + +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
M + G P T N +S+ GK+E +L +M P+ TY+ILL K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKR 359
+ + + + + G D T L+ +C + + I RG+ TF
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 360 LNDEFKKRGMTALAQKLCNVMSSVPRSME 388
L + G A L VM+S+ S++
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLD 858
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 44/372 (11%)
Query: 24 GHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLC 83
G+ +P+ V FV +AG +A I+ E +NL + + ++ +D
Sbjct: 678 GNVLPNKVMYTCFV---DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM----IDGYS 730
Query: 84 KQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPN 143
+ G+++ ++ + +Q+ P + YNILL+G+ + K+V + + + + P+
Sbjct: 731 RMGKIEKTNDLLPEMG--NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 144 VVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG---------- 193
+T +LV G C ++ ++++K G+E + +N +I G
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 194 -------------------------RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAG 228
RF+E ++ P Y L+ G C+ G
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908
Query: 229 DLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYH 288
D++ A + + MI+ P + R +K GK ++A L R M++ P ++
Sbjct: 909 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
Query: 289 ILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR 348
L+ + CK + A+++ M G +DL + +LI LC A +E+M
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 349 GLVPHYLTFKRL 360
G + + T+K L
Sbjct: 1029 GFLANATTYKAL 1040
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 156 RLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMV 215
R R + ++ EM K+GI P + Y +I+GL G + + E + + P V
Sbjct: 871 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 930
Query: 216 TYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKM 275
+++V+ K G + A+ +L+ M+ +P+ ++ K G V +A+ L M
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 276 IESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIH-LLCRMYK 334
G D ++Y++L+ LC + + LA ++ +EMK G + T LI LL R
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETA 1050
Query: 335 FDEASAEFEDMIRRGLV 351
F A +D++ RG +
Sbjct: 1051 FSGADIILKDLLARGFI 1067
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 5/242 (2%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSW-APTVRVYNILLNGWFRSKNVKDAERFWL 133
F +L+ C G + A + L S T +LN R+ +++
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN---RNHRFQESRMVLH 883
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
EM K+ ++P Y L+ G CR+ + A + +EM I P + + ++ L + G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ +E + ++ L + PT+ ++T+L+ CK G++ A ++ +M + G +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK-ILCKEDKLDLAIQVSKEMKC 312
G + A LY +M G+ + TY L++ +L +E A + K++
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063
Query: 313 RG 314
RG
Sbjct: 1064 RG 1065
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ LC+ G +K A + K + + P + ++ + +A M K
Sbjct: 900 LINGLCRVGDIKTA--FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR--- 194
+ P + ++ TL+ C+ V A+ L M G++ + + YN +I GL G
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 195 ----FEEVSGMMERFLVCEPGPTMVTYTSLVKGY-CKAGDLEGASKILKMMISRGFLPS 248
+EE+ G + FL TY +L++G + GA ILK +++RGF+ S
Sbjct: 1018 AFELYEEMKG--DGFL-----ANATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1069
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 8/325 (2%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
LL+ C R+ A + E+ + P + L++G F +A +M +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEM--GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 138 ENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEE 197
P++VTYGT+V G C+ +D A+ L+K+M K IE + ++YNT+IDGL + ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 198 VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFR 257
+ P + TY+SL+ C G AS++L MI R P+ T++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 258 YFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDI 317
F K GK+ +A LY +MI+ PD TY L+ C D+LD A + + M + C
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 318 DLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLC 377
++ T + LI C+ + +E F +M +RGLV + +T+ L F + AQ +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 378 NVMSSV---PRSME---LLDSRCKD 396
M SV P + LLD CK+
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKN 481
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 156/308 (50%), Gaps = 4/308 (1%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELD-QSWAPTVRVYNILLNGWFRSKNVKDAERFW 132
++ ++D LCK + A F E+D + P V Y+ L++ DA R
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLF---TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 133 LEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEA 192
+M + + PNVVT+ L++ + + ++ A +L EM K I+P+ Y+++I+G
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 193 GRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTY 252
R +E M E + + P +VTY++L+KG+CKA +E ++ + M RG + + TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 253 NYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKC 312
F + ++A ++++M+ G P+ LTY+ILL LCK KL A+ V + ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 313 RGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTAL 372
+ D+ T ++I +C+ K ++ F ++ +G+ P+ + + + F ++G
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 373 AQKLCNVM 380
A L M
Sbjct: 557 ADSLLKKM 564
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P + Y ++NG + ++ A +M K + +VV Y T+++G C+ + +D A+ L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
EM +GI P+ Y+++I L GR+ + S ++ + + P +VT+++L+ + K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
G L A K+ MI R P TY+ F ++++A +++ MI P+ +T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y L+K CK +++ +++ +EM RG + T T LIH + D A F+ M+
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALA 373
G+ P+ LT+ L D K G A A
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
+ L+ LC GR AS +++ P V ++ L++ + + + +AE+ + E
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDM--IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M K ++ P++ TY +L+ G+C R+D A + + M + PN + Y+T+I G +A R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 195 FEE----VSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPT 250
EE M +R LV G T VTYT+L+ G+ +A D + A + K M+S G P+
Sbjct: 414 VEEGMELFREMSQRGLV---GNT-VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 251 TYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEM 310
TYN K GK+ AM ++ + S PD TY+I+++ +CK K++ ++ +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 311 KCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
+G ++ +I CR +EA + + M G +P+ T+ L
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 160/347 (46%), Gaps = 15/347 (4%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
+I L + A LL D I P+ V TF LI + + G + A ++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVV---TFSALIDAFVKEGKLVEAEKLYD--- 352
Query: 61 NLDMVK-NFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGW 119
+M+K + D + L++ C R+ A F + + P V Y+ L+ G+
Sbjct: 353 --EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYSTLIKGF 408
Query: 120 FRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNA 179
++K V++ + EM + + N VTY TL+ G+ + R D A + K+M G+ PN
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 180 IVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM 239
+ YN ++DGL + G+ + + E P + TY +++G CKAG +E ++
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 240 MISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDK 299
+ +G P+ YN F + G E+A +L +KM E G P+ TY+ L++ ++
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 300 LDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
+ + ++ KEM R C D ST I L+ M F DM+
Sbjct: 589 REASAELIKEM--RSCGFAGDAST--IGLVTNMLHDGRLDKSFLDML 631
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Query: 107 PTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRL 166
P++ +N LL+ + + +M+ ++ ++ TY + +CR ++ A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 167 VKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCK 226
+ +M K G EP+ + +++++G + R + ++++ + P T+T+L+ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 227 AGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLT 286
A ++ M+ RG P TY K G ++ A++L +KM + D +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 287 YHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMI 346
Y+ ++ LCK +D A+ + EM +G D+ T + LI LC ++ +AS DMI
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 347 RRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSSVPRSME 388
R + P+ +TF L D F K G A+KL + M + RS++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 360
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 159 RVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYT 218
+VD A+ L +M K P+ + +N ++ + + +FE V + E+ + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 219 SLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIES 278
+ +C+ L A +L M+ G+ P T + + ++ DA+ L +M+E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 279 GYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEA 338
GY PD T+ L+ L +K A+ + +M RGC DL T +++ LC+ D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 339 SAEFEDM 345
+ + M
Sbjct: 243 LSLLKKM 249
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%)
Query: 210 PGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAM 269
P P++V + L+ K E + + M + G TY+ F F + ++ A+
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 270 NLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLL 329
+ KM++ GY PD +T LL C ++ A+ + +M G D T T LIH L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 330 CRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVM 380
K EA A + M++RG P +T+ + + KRG LA L M
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 66 KNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNV 125
K+F + I++ SLC +G++ A + ++ L + PTV Y IL+ V
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEATMLEGGV 244
Query: 126 KDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTV 185
+A + EM + P++ TY T++ G C+ VDRA +V+ + +G EP+ I YN +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 186 IDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGF 245
+ L+ G++EE +M + + P +VTY+ L+ C+ G +E A +LK+M +G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 246 LPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQ 305
P +Y+ F + G+++ A+ MI G PD + Y+ +L LCK K D A++
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 306 VSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFK 365
+ ++ GC + + + L A +M+ G+ P +T+ +
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 366 KRGMTALAQKL 376
+ GM A +L
Sbjct: 485 REGMVDEAFEL 495
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 103 QSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDR 162
+ + P V + L+ G+F +N+ A R +E+ ++ P+V Y L+ G+C++ R+D
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDD 176
Query: 163 AIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVK 222
A R++ MR + P+ + YN +I L G+ + ++ + L PT++TYT L++
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 223 GYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTP 282
G ++ A K++ M+SRG P TYN R K G V+ A + R + G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 283 DRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEF 342
D ++Y+ILL+ L + K + ++ +M CD ++ T ++LI LCR K +EA
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 343 EDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ M +GL P ++ L F + G +A + M S
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%)
Query: 101 LDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRV 160
L++ P V YN L+NG+ + + DA R MR ++ +P+ VTY ++ C ++
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 161 DRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSL 220
D A++++ ++ + +P I Y +I+ + G +E +M+ L P M TY ++
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 221 VKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY 280
++G CK G ++ A ++++ + +G P +YN R GK E+ L KM
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 281 TPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASA 340
P+ +TY IL+ LC++ K++ A+ + K MK +G D + LI CR + D A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 341 EFEDMIRRGLVPHYLTFKRLNDEFKKRG 368
E MI G +P + + + K G
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 13/380 (3%)
Query: 1 MIKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFAN 60
MI L + D A +L + + P + T+ ILI G V+ A+ +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVI---TYTILIEATMLEGGVDEALKLMDEM- 254
Query: 61 NLDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWF 120
+ + + ++ +CK+G V A E + EL + P V YNILL
Sbjct: 255 ---LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV-RNLEL-KGCEPDVISYNILLRALL 309
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
++ E+ +M E PNVVTY L+ CR +++ A+ L+K M+++G+ P+A
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
Y+ +I GR + +E + P +V Y +++ CK G + A +I +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
G P+ ++YN F G A+++ +M+ +G PD +TY+ ++ LC+E +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLL--CRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
D A ++ +M R C+ T I LL C+ ++ ++A E M+ G P+ T+
Sbjct: 490 DEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 359 RLNDEFKKRGMTALAQKLCN 378
L + G A A +L N
Sbjct: 548 VLIEGIGFAGYRAEAMELAN 567
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 121 RSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAI 180
RS N ++ M ++ P+V+ L++G+ LR + +A+R+++ + K G +P+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 181 VYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMM 240
YN +I+G + R ++ + +++R + P VTY ++ C G L+ A K+L +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKL 300
+S P+ TY G V++A+ L +M+ G PD TY+ +++ +CKE +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 301 DLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRL 360
D A ++ + ++ +GC+ D+ + +L+ L K++E M P+ +T+ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 361 NDEFKKRGMTALAQKLCNVM 380
+ G A L +M
Sbjct: 340 ITTLCRDGKIEEAMNLLKLM 359
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ ILI R G +E A+ + K A ++ L+ + C++GR+ A E+
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKE----KGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 95 FHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGY 154
+ P + YN +L ++ A + ++ + +PN +Y T+
Sbjct: 391 LETM--ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 155 CRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTM 214
RA+ ++ EM GI+P+ I YN++I L G +E ++ CE P++
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 215 VTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRK 274
VTY ++ G+CKA +E A +L+ M+ G P+ TTY G +AM L
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Query: 275 MI 276
++
Sbjct: 569 LV 570
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 255 FFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRG 314
F + G ++++L M+ GY PD + L+K + A++V + ++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 315 CDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQ 374
D+ LI+ C+M + D+A+ + M + P +T+ + RG LA
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 375 KLCNVMSS 382
K+ N + S
Sbjct: 214 KVLNQLLS 221
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 14/385 (3%)
Query: 2 IKVLAKAKEFDSAWCLLLDKIGGHEVPDFVSKDTFVILIRRYARAGMVEAAIWTFEFANN 61
+ +L KAK++D ++++ G ++ V+ +T ++RR+A AG E A+ F+
Sbjct: 128 VDILGKAKKWDRM-KEFVERMRGDKL---VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 62 LDMVKNFDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFR 121
+ KN +S +LLD+LCK+ RV+ A +L P +NI ++GW +
Sbjct: 184 FGLEKNTES----MNLLLDTLCKEKRVEQARVVL---LQLKSHITPNAHTFNIFIHGWCK 236
Query: 122 SKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIV 181
+ V++A EM+ P V++Y T++ YC+ + ++ EM G PN+I
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 182 YNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKM-M 240
Y T++ L FEE + R P + Y L+ +AG LE A ++ ++ M
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEM 356
Query: 241 ISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGY-TPDRLTYHILLKILCKEDK 299
G + +TYN + + + A+ L ++M S PD TY LL+ K
Sbjct: 357 PELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 300 LDLAIQVSKEMKCR-GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFK 358
+ ++ KEM + +D T T LI LCR + A FE+MI + + P + T
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Query: 359 RLNDEFKKRGMTALAQKLCNVMSSV 383
L +E KK+ M A+++ ++M +V
Sbjct: 477 LLLEEVKKKNMHESAERIEHIMKTV 501
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 139/270 (51%)
Query: 113 NILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRK 172
N+L+N + +S A F +M K P++VT+ +L+ G+C R++ A+ +V +M +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 173 EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEG 232
GI+P+ ++Y T+ID L + G + ++ P +V YTSLV G C +G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 233 ASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLK 292
A +L+ M R P T+N F K GK DA LY +MI P+ TY L+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 293 ILCKEDKLDLAIQVSKEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVP 352
C E +D A Q+ M+ +GC D+ T LI+ C+ K D+A F +M ++GL
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 353 HYLTFKRLNDEFKKRGMTALAQKLCNVMSS 382
+ +T+ L F + G +AQ++ + M S
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 68 FDSGASLFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKD 127
F+ F L++ C R++ A ++ E+ P V +Y +++ ++ +V
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM--GIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 128 AERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVID 187
A + +M + P+VV Y +LV G C R A L++ M K I+P+ I +N +ID
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 188 GLVEAGRFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLP 247
V+ G+F + + + P + TYTSL+ G+C G ++ A ++ +M ++G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 248 SPTTYNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVS 307
Y F K KV+DAM ++ +M + G T + +TY L++ + K ++A +V
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 308 KEMKCRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRR---GLVPHYLTFKRL 360
M RG ++ T +L+H LC K +A FEDM +R G+ P+ T+ L
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 16/354 (4%)
Query: 28 PDFVSKDTFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGR 87
PD V + +I + G V A+ F+ N + + ++ L++ LC GR
Sbjct: 175 PDVV---MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD----VVMYTSLVNGLCNSGR 227
Query: 88 VKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRKENVTPNVVTY 147
+ A R + P V +N L++ + + DAE + EM + ++ PN+ TY
Sbjct: 228 WRDADSLL--RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 148 GTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLV 207
+L+ G+C VD A ++ M +G P+ + Y ++I+G + + ++ M + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD--AMKIFYEM 343
Query: 208 CEPGPT--MVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKV 265
+ G T +TYT+L++G+ + G A ++ M+SRG P+ TYN GKV
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 266 EDAMNLYRKMIE---SGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCRGCDIDLDTS 322
+ A+ ++ M + G P+ TY++LL LC KL+ A+ V ++M+ R DI + T
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 323 TMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALAQKL 376
T++I +C+ K A F + +G+ P+ +T+ + + G+ A L
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 75 FEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLE 134
F L+D+ K+G+ A E +++ + S AP + Y L+NG+ V +A + +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 135 MRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAGR 194
M + P+VV Y +L+ G+C+ ++VD A+++ EM ++G+ N I Y T+I G + G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 195 FEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISR---GFLPSPTT 251
+ + P + TY L+ C G ++ A I + M R G P+ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 252 YNYFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMK 311
YN GK+E A+ ++ M + +TY I+++ +CK K+ A+ + +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 312 CRGCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGL 350
+G ++ T T +I L R EA F M G+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 3/309 (0%)
Query: 74 LFEILLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWL 133
F++ + L K KA S F + +L W Y +L S +A +
Sbjct: 5 FFQLHRNRLVKGNSGKALS--FSRLLDL-SFWVRAFCNYREILRNGLHSLQFNEALDLFT 61
Query: 134 EMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIEPNAIVYNTVIDGLVEAG 193
M + P+++ + L+ ++++ D I L ++ G+ + N +++ ++
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 194 RFEEVSGMMERFLVCEPGPTMVTYTSLVKGYCKAGDLEGASKILKMMISRGFLPSPTTYN 253
+ S + + + P +VT+TSL+ G+C +E A ++ M+ G P Y
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 254 YFFRYFSKFGKVEDAMNLYRKMIESGYTPDRLTYHILLKILCKEDKLDLAIQVSKEMKCR 313
K G V A++L+ +M G PD + Y L+ LC + A + + M R
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 314 GCDIDLDTSTMLIHLLCRMYKFDEASAEFEDMIRRGLVPHYLTFKRLNDEFKKRGMTALA 373
D+ T LI + KF +A + +MIR + P+ T+ L + F G A
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 374 QKLCNVMSS 382
+++ +M +
Sbjct: 302 RQMFYLMET 310
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 78 LLDSLCKQGRVKAASEYFHKRKELDQSWAPTVRVYNILLNGWFRSKNVKDAERFWLEMRK 137
L++ C +G V A + F+ + + P V Y L+NG+ + K V DA + + EM +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMET--KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 138 ENVTPNVVTYGTLVEGY-----------------------------------CRLRRVDR 162
+ +T N +TY TL++G+ C +V +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 163 AIRLVKEMRK---EGIEPNAIVYNTVIDGLVEAGRFEEVSGMMERFLVCEPGPTMVTYTS 219
A+ + ++M+K +G+ PN YN ++ GL G+ E+ + E E ++TYT
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 220 LVKGYCKAGDLEGASKILKMMISRGFLPSPTTYNYFFRYFSKFGKVEDAMNLYRKMIESG 279
+++G CKAG ++ A + + S+G P+ TY + G +A L+RKM E G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 280 YT 281
+
Sbjct: 526 VS 527
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 42/179 (23%)
Query: 35 TFVILIRRYARAGMVEAAIWTFEFANNLDMVKNFDSGASLFEILLDSLCKQGRVKAASEY 94
T+ LI+ + + G A F + + N + + +LL LC G+VK A
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT----YNVLLHCLCYNGKVKKALMI 409
Query: 95 FH--KRKELDQSWAPTVRVYNILLNG---------------------------------- 118
F +++E+D AP + YN+LL+G
Sbjct: 410 FEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 119 -WFRSKNVKDAERFWLEMRKENVTPNVVTYGTLVEGYCRLRRVDRAIRLVKEMRKEGIE 176
++ VK+A + + + V PNVVTY T++ G R A L ++M+++G+
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,885,737
Number of Sequences: 539616
Number of extensions: 5960028
Number of successful extensions: 27377
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 19753
Number of HSP's gapped (non-prelim): 2776
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)