BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016030
(396 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 237/382 (62%), Positives = 282/382 (73%), Gaps = 1/382 (0%)
Query: 15 LVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 74
L++ RGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RI
Sbjct: 171 LLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNF 229
Query: 75 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT 134
+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P T
Sbjct: 230 AIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNT 289
Query: 135 PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 194
PP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR+ L
Sbjct: 290 PPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFL 349
Query: 195 LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVN 254
LNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ PP N
Sbjct: 350 LNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN 409
Query: 255 ANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDE 314
T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+ E+E
Sbjct: 410 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEE 469
Query: 315 XXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG 374
T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG
Sbjct: 470 SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVG 529
Query: 375 NIPNQALACGLTGKRFMNPKQN 396
IP +ALACG T K +N +N
Sbjct: 530 RIPTKALACGGTAKSLINNPKN 551
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 129/341 (37%), Gaps = 59/341 (17%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V+ K YR+R+ + H M ++E DG Q VD++ I++ + YS
Sbjct: 189 SVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYS 248
Query: 109 VLLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 164
+L NQ P NYWI A G G A+ L Y + + P+T
Sbjct: 249 FVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAI--LRYDGATTAD------PVTVA--S 297
Query: 165 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 222
H+K + P N H+ N ++ GF + IN VS T P P L
Sbjct: 298 TVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSL-GFACGNFVINGVSFTPPTVPVL 356
Query: 223 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANA 281
I G A D L SG V L N+T+++ L A
Sbjct: 357 LQICSGANTAAD-----------------------LLPSGSVISLPSNSTIEIALPAGAA 393
Query: 282 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 341
P HP+HLHGHDF V + D+ + +RF
Sbjct: 394 GGP-----HPFHLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNV------TIRFC 442
Query: 342 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALA 382
DNPG W HCHI+ H G +V A +IPN A A
Sbjct: 443 TDNPGPWFLHCHIDWHLDAGFAIVFA------EDIPNTASA 477
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 122/326 (37%), Gaps = 53/326 (16%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + +H++ V+EADG QP VD + I++ + YS
Sbjct: 187 VISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSF 246
Query: 110 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 165
+L NQD NYWI A G G A +L Y P+ P +
Sbjct: 247 VLNANQDVD-NYWIRANPNFGTTGFADGVNSA--ILRYDDAD---------PVEPVTNQT 294
Query: 166 DHSKSFSNKIFALMGSPKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 223
+ + L P P PT L LN +G T + IN S T P P L
Sbjct: 295 GTTLLLETDLHPLTSMPVPGNPTQGGADLN-LNMAFNFDG-TNFFINGESFTPPTVPVLL 352
Query: 224 SIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAI 282
I G A D L SG VY L N+++++ A
Sbjct: 353 QIISGANTAQD-----------------------LLPSGSVYSLPSNSSIEITFPATTAA 389
Query: 283 RPNLSEIHPWHLHGHDFWVL-GRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 341
HP+HLHGH F V+ G + +D +RF
Sbjct: 390 P---GAPHPFHLHGHVFAVVRSAGSTSYNYDDPVWRDVVSTGTPQAG-----DNVTIRFQ 441
Query: 342 ADNPGAWAFHCHIEPHFHIGMGVVLA 367
DNPG W HCHI+ H G VV+A
Sbjct: 442 TDNPGPWFLHCHIDFHLDAGFAVVMA 467
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 126/341 (36%), Gaps = 62/341 (18%)
Query: 46 CAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGE 105
A +++VQ K YR R+ + H + V+E DG QP VD + I++ +
Sbjct: 183 AALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQ 242
Query: 106 SYSVLLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPT-------SASKIPLS 154
YS +L NQ NYWI A G G A+ P + S IPL
Sbjct: 243 RYSFVLNANQTVG-NYWIRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLI 301
Query: 155 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPT--NFHRRLTLLNTQNTINGFTKWAINNV 212
+ P A M P PT + L L N N F INN
Sbjct: 302 ETNLHP---------------LARMPVPGSPTPGGVDKALNLAFNFNGTNFF----INNA 342
Query: 213 SLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTV 272
S T P P L I G + A D + P VY L ++T+
Sbjct: 343 SFTPPTVPVLLQILSGAQTAQD--------------LLP--------AGSVYPLPAHSTI 380
Query: 273 DVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP 332
++ L A A+ P HP+HLHGH F V+ R G T A
Sbjct: 381 EITLP-ATALAPGAP--HPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDVVSTGTPAA--- 433
Query: 333 YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 373
+RF DNPG W HCHI+ H G +V A V V
Sbjct: 434 GDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADV 474
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
I++V+ K YR+R+ + H++ ++E DG +P VD + I++G+ YS
Sbjct: 186 IVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSF 245
Query: 110 LLTTNQDPSYNYWISAGV-RGRKP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWD 163
+L NQ P NYWI A +GR A +L Y + + S P + +
Sbjct: 246 VLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLN 304
Query: 164 DYDHSKSFSNKIFALMGSPKP-PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTP 220
+ D A G P P + + R L GF+ ++ IN + P P
Sbjct: 305 EADLHALIDP---AAPGIPTPGAADVNLRFQL--------GFSGGRFTINGTAYESPSVP 353
Query: 221 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNA 279
L I G + +AN L +G VY L N V++++
Sbjct: 354 TLLQIMSGAQ-----------------------SANDLLPAGSVYELPRNQVVELVVPAG 390
Query: 280 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALR 339
P HP+HLHGH F V+ R G T T +R
Sbjct: 391 VLGGP-----HPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIR 439
Query: 340 FVADNPGAWAFHCHIEPHFHIGMGVVLA 367
FV DNPG W FHCHIE H G+ +V A
Sbjct: 440 FVTDNPGPWFFHCHIEFHLMNGLAIVFA 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
I++V+ K YR+R+ + H++ ++E DG +P VD + I++G+ YS
Sbjct: 186 IVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSF 245
Query: 110 LLTTNQDPSYNYWISAGV-RGRKP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWD 163
+L NQ P NYWI A +GR A +L Y + + S P + +
Sbjct: 246 VLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLN 304
Query: 164 DYDHSKSFSNKIFALMGSPKP-PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTP 220
+ D A G P P + + R L GF+ ++ IN + P P
Sbjct: 305 EADLHALIDP---AAPGIPTPGAADVNLRFQL--------GFSGGRFTINGTAYESPSVP 353
Query: 221 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNA 279
L I G + +AN L +G VY L N V++++
Sbjct: 354 TLLQIMSGAQ-----------------------SANDLLPAGSVYELPRNQVVELVVPAG 390
Query: 280 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALR 339
P HP+HLHGH F V+ R G T T +R
Sbjct: 391 VLGGP-----HPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIR 439
Query: 340 FVADNPGAWAFHCHIEPHFHIGMGVVLA 367
FV DNPG W FHCHIE H G+ +V A
Sbjct: 440 FVTDNPGPWFFHCHIEFHLMNGLAIVFA 467
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 128/333 (38%), Gaps = 54/333 (16%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + H + V+EAD ++P VD + I++ + YS
Sbjct: 186 VITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSF 245
Query: 110 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDD 164
+L +QD NYWI A G R A+ L Y P+ P TP +
Sbjct: 246 VLNADQDVG-NYWIRALPNSGTRNFDGGVNSAI--LRYD----GAAPVEPTTSQTPSTNP 298
Query: 165 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 222
S + + A GSP P L L N GF K+ IN S T P P L
Sbjct: 299 LVESALTTLEGTAAPGSPAPGG---VDLAL----NMAFGFAGGKFTINGASFTPPTVPVL 351
Query: 223 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANA 281
I G + A D L SG VY L N +++ L A A
Sbjct: 352 LQILSGAQSAQD-----------------------LLPSGSVYSLPANADIEISLP-ATA 387
Query: 282 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 341
P HP+HLHGH F V+ R G T E P +RF
Sbjct: 388 AAPGFP--HPFHLHGHTFAVV-RSAGSSTYNYENPVYRDVVSTGS-----PGDNVTIRFR 439
Query: 342 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG 374
DNPG W HCHI+ H G VV+A + V
Sbjct: 440 TDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVA 472
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 126/332 (37%), Gaps = 66/332 (19%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + NH M ++EAD QP EVD + I++ + YS
Sbjct: 187 VIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSF 246
Query: 110 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLN----YHPTSASKIPLSP------ 155
+L +Q P NYWI A G G A+ + PTS P P
Sbjct: 247 VLDASQ-PVDNYWIRANPAFGNTGFAGGINSAILRYDGAPEIEPTSVQTTPTKPLNEVDL 305
Query: 156 PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLT 215
P++P + GSP+ P + L L+ N N F IN+ +
Sbjct: 306 HPLSP---------------MPVPGSPE-PGGVDKPLNLVFNFNGTNFF----INDHTFV 345
Query: 216 LPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 275
P P L I G + A Q+ PE V++L N+++++
Sbjct: 346 PPSVPVLLQILSGAQAA--QDLVPE--------------------GSVFVLPSNSSIEIS 383
Query: 276 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGW 335
A A P HP+HLHGH F V+ D P
Sbjct: 384 FP-ATANAPGFP--HPFHLHGHAFAVVRSAGSSVYNYDNPIFRDVVSTGQ------PGDN 434
Query: 336 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 367
+RF +NPG W HCHI+ H G VV+A
Sbjct: 435 VTIRFETNNPGPWFLHCHIDFHLDAGFAVVMA 466
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 127/332 (38%), Gaps = 52/332 (15%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + H + V+EAD ++P VD + I++ + YS
Sbjct: 186 VITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSF 245
Query: 110 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDD 164
+L +QD NYWI A G + T A +L Y P+ P TP +
Sbjct: 246 VLNADQDVD-NYWIRALPNSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNP 298
Query: 165 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 222
S + K A GSP P L L N GF + IN S T P P L
Sbjct: 299 LVESALTTLKGTAAPGSPTPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVL 351
Query: 223 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 282
I G + A D + P VY L N +++ L A A
Sbjct: 352 LQILSGAQSAAD--------------LLP--------AGSVYSLPANADIEISLP-ATAA 388
Query: 283 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVA 342
P HP+HLHGH F V+ R G T + P +RF
Sbjct: 389 APGFP--HPFHLHGHVFAVV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRT 440
Query: 343 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVG 374
DNPG W HCHI+ H G VV+A + V
Sbjct: 441 DNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVA 472
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 127/332 (38%), Gaps = 52/332 (15%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + H + V+EAD ++P VD + I++ + YS
Sbjct: 186 VITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSF 245
Query: 110 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDD 164
+L +QD NYWI A G + T A +L Y P+ P TP +
Sbjct: 246 VLNADQDVD-NYWIRALPNSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNP 298
Query: 165 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 222
S + K A GSP P L L N GF + IN S T P P L
Sbjct: 299 LVESALTTLKGTAAPGSPTPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVL 351
Query: 223 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 282
I G + A D + P VY L N +++ L A A
Sbjct: 352 LQILSGAQSAAD--------------LLP--------AGSVYSLPANADIEISLP-ATAA 388
Query: 283 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVA 342
P HP+HLHGH F V+ R G T + P +RF
Sbjct: 389 APGFP--HPFHLHGHVFAVV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRT 440
Query: 343 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVG 374
DNPG W HCHI+ H G VV+A + V
Sbjct: 441 DNPGPWFLHCHIDFHLEAGFAVVMAEDIPDVA 472
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 127/344 (36%), Gaps = 63/344 (18%)
Query: 39 KLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDD 98
+ G ++ V+ NK YR R+ + H M ++E DG +P EVD
Sbjct: 176 RFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDS 235
Query: 99 MDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPAL--TLLNY------HPT---S 147
+ I++ + YS +L Q NYWI A T L +L Y PT +
Sbjct: 236 IQIFASQRYSFVLNATQSVD-NYWIRAIPNTGTIDTTGGLNSAILRYSGADIVDPTANAT 294
Query: 148 ASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN--FHRRLTLLNTQNTINGFT 205
S IPL + P + SP P + +N + NG T
Sbjct: 295 TSVIPLVETDLVP------------------LDSPAAPGDPVVGGVDLAMNLDFSFNG-T 335
Query: 206 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 265
+ INN +L P P L I G + A D + P VY
Sbjct: 336 NFFINNETLIPPTVPVLLQILSGAQSASD--------------LLP--------TGSVYT 373
Query: 266 LGLNTTVDVI--LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXX 323
L LN+T+++ + N + HP+HLHGH F V+ R G D
Sbjct: 374 LPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVV-RSAGS---SDYNYVNPVRRD 429
Query: 324 XXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 367
T P +RF DN G W HCHI+ H G +V A
Sbjct: 430 TVSTGN--PGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVFA 471
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 120/344 (34%), Gaps = 77/344 (22%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ VQ K YR RI + H+M V+E DG QP VD + I++G+ YSV
Sbjct: 213 VVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSV 272
Query: 110 LLTTNQDPSYNYWISAG-VRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
++ NQ NYWI A GR T
Sbjct: 273 VVEANQAVG-NYWIRANPSNGRNGFT---------------------------------- 297
Query: 169 KSFSNKIFALMGSP-KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 227
++ IF G+ PT T LN N I A P P G
Sbjct: 298 GGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGA--------PGNPVPGGADI 349
Query: 228 GLKDAFDQNGPPENFSNEYDVMKPP------------VNANTTL-GSGVYMLGLNTTVDV 274
L +N +F+ PP N N L G V L N +++
Sbjct: 350 NLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEI 409
Query: 275 ILQNANAIRPNLSEIHPWHLHGHDFWVLGR-GEGKFTKEDEXXXXXXXXXXXXTAVIFPY 333
+ HP+HLHGH+F V+ G + + V F
Sbjct: 410 SIPGGGN--------HPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTF-- 459
Query: 334 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIP 377
RFV DNPG W HCHI+ H G+ VV A E + NIP
Sbjct: 460 -----RFVTDNPGPWFLHCHIDWHLEAGLAVVFA---EDIPNIP 495
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 124/321 (38%), Gaps = 50/321 (15%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 112
VQP+ TY LRI +++H+M VVE DG + D + I + Y+VL+
Sbjct: 182 VQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVH 241
Query: 113 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 172
T D N+ I P+ LN + S + + P + D +F
Sbjct: 242 TKNDTDKNFAIMQKFDDTMLDVIPSDLQLN----ATSYMVYNKTAALPTQNYVDSIDNFL 297
Query: 173 NKIF-------ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 225
+ + A+ G P H + N NG NN++ T P P L ++
Sbjct: 298 DDFYLQPYEKEAIYGEPD-----HVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTV 352
Query: 226 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 285
+G N S Y +NT ++L + V+++L N +
Sbjct: 353 L--------SSGDQANNSEIY-------GSNT----HTFILEKDEIVEIVLNNQD----- 388
Query: 286 LSEIHPWHLHGHDFWVLGR--------GEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWT 336
+ HP+HLHGH F + R GE + + D T + P
Sbjct: 389 -TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNF 447
Query: 337 ALRFVADNPGAWAFHCHIEPH 357
+RF ADNPG W FHCHIE H
Sbjct: 448 VIRFKADNPGVWFFHCHIEWH 468
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 125/340 (36%), Gaps = 64/340 (18%)
Query: 50 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 109
++ V K YR R+ + H+M +++ D VQP V + IY+ + YS
Sbjct: 187 VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSF 246
Query: 110 LLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 169
+L NQ + NYWI A P + +
Sbjct: 247 ILNANQAVN-NYWIRA---------------------------------NPNQGNVGFTN 272
Query: 170 SFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 227
++ I G+ +P T+ + L+ Q ++ T A+ P +P G +
Sbjct: 273 GINSAILRYSGAAATQPTTSQTSSVQPLD-QTNLHPLTATAV-------PGSPVAGGVNL 324
Query: 228 GLKDAFDQNGPPENFSNEYDVMKPPV-----------NANTTLGSG-VYMLGLNTTVDVI 275
+ AF+ NG +F + + P V +A L SG VY L + +++
Sbjct: 325 AINQAFNFNGT-NHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSLPSDANIEIS 383
Query: 276 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGW 335
+A HP+HLHGH F V+ R G T A
Sbjct: 384 FPATSAAA---GGPHPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDTVSTGTPAA---NDN 436
Query: 336 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 375
+RF +NPG W HCHI+ H G VV A + V +
Sbjct: 437 VTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQDIPDVAS 476
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 112
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 113 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 172
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 173 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 216
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 217 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 275
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 276 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 320
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 321 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 364
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 112
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 113 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 172
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 173 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 216
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 217 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 275
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 276 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 320
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 321 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 364
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 112
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 113 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 172
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 173 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 216
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 217 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 275
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 276 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 320
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 321 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 364
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 114/354 (32%), Gaps = 90/354 (25%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V P K YR R+ + H M ++E D P VD + I++ + YS
Sbjct: 186 SVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYS 245
Query: 109 VLLTTNQDPSYNYWI----------------SAGVR--GRKPATPPA--------LTLLN 142
+L NQ NYWI SA +R G P L +N
Sbjct: 246 FVLEANQAVD-NYWIRANPNFGNVGFTGGINSAILRYDGAAAVEPTTTQTTSTAPLNEVN 304
Query: 143 YHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN 202
HP A+ +P SP + G +N N
Sbjct: 305 LHPLVATAVPGSP----------------------VAGGVD---------LAINMAFNFN 333
Query: 203 GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG 262
G T + IN S T P P L I G + NA L SG
Sbjct: 334 G-TNFFINGASFTPPTVPVLLQIISGAQ-----------------------NAQDLLPSG 369
Query: 263 -VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXX 321
VY L N +++ A +HLHGH F V+ D
Sbjct: 370 SVYSLPSNADIEISFPATAAAPGAPHP---FHLHGHAFAVVRSAGSTVYNYDNPIFRDVV 426
Query: 322 XXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 375
A +RF DNPG W HCHI+ H G VV A + V +
Sbjct: 427 STGTPAA----GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVAS 476
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 117/334 (35%), Gaps = 66/334 (19%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V K YR R+ + H + ++E D QP EVD + I++ + YS
Sbjct: 186 SVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYS 245
Query: 109 VLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
+L NQ NYWI A P + +
Sbjct: 246 FVLDANQAVD-NYWIRA---------------------------------NPNFGNVGFD 271
Query: 169 KSFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 226
++ I G+P +P TN + T + N ++ VS +P +P G +
Sbjct: 272 GGINSAILRYDGAPAVEPTTN---QTTSVKPLNEVDLHPL-----VSTPVPGSPSSGGVD 323
Query: 227 YGLKDAFDQNGPPENFSNEYDVMKPPV------------NANTTLGSG-VYMLGLNTTVD 273
+ AF+ NG NF PP A L SG VY+L N +++
Sbjct: 324 KAINMAFNFNG--SNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIE 381
Query: 274 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY 333
+ A +HLHGH F V+ D A
Sbjct: 382 ISFPATAAAPGAPHP---FHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----G 434
Query: 334 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 367
+RF +NPG W HCHI+ H G VV+A
Sbjct: 435 DNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA 468
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 117/333 (35%), Gaps = 64/333 (19%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V K YR R+ + H + ++E D QP EVD + I++ + YS
Sbjct: 186 SVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYS 245
Query: 109 VLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
+L NQ NYWI A P + +
Sbjct: 246 FVLDANQAVD-NYWIRA---------------------------------NPNFGNVGFD 271
Query: 169 KSFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 226
++ I G+P +P TN + T + N ++ VS +P P G +
Sbjct: 272 GGINSAILRYDGAPAVEPTTN---QTTSVKPLNEVDLHPL-----VSTPVPGAPSSGGVD 323
Query: 227 YGLKDAFDQNGPPENFSNEYDVMKPPV-----------NANTTLGSG-VYMLGLNTTVDV 274
+ AF+ NG F N + P V A L SG VY+L N ++++
Sbjct: 324 KAINMAFNFNGS-NFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEI 382
Query: 275 ILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG 334
A +HLHGH F V+ D A
Sbjct: 383 SFPATAAAPGAPHP---FHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GD 435
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 367
+RF +NPG W HCHI+ H G VV+A
Sbjct: 436 NVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA 468
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 118/328 (35%), Gaps = 47/328 (14%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 112
+ P K +RLRI + H M V+ D V F V + + G+ Y V +
Sbjct: 260 LTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTID 319
Query: 113 TNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
N P NYW + G+ G PA + Y A+ +P P +H
Sbjct: 320 ANS-PVGNYWFNVTFGDGLCGSSNNKFPA-AIFRYQGAPAT-LPTDQGLPVP-----NHM 371
Query: 169 KSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 228
+ + ++ P NF +R NT+ V+L + TP
Sbjct: 372 CLDNLNLTPVVTRSAPVNNFVKR-----PSNTLG---------VTLDIGGTPLF------ 411
Query: 229 LKDAFDQNGPPENFSNEYDVMKPPVNANTT--LGSGVYMLGLNTTVDVILQNANAIRPNL 286
+ NG N ++ ++ NT+ + + + L + P +
Sbjct: 412 ---VWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIV 468
Query: 287 SEIHPWHLHGHDFWVLGRGEGK---------FTKEDEXXXXXXXXXXXXTAVIFPYG-WT 336
S HP HLHGHDF VLGR + F + + P G W
Sbjct: 469 SLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWL 528
Query: 337 ALRFVADNPGAWAFHCHIEPHFHIGMGV 364
L F DNPGAW FHCHI H G+ V
Sbjct: 529 LLAFKTDNPGAWLFHCHIAWHVSGGLSV 556
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 121/341 (35%), Gaps = 68/341 (19%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V K R R+ + H + ++E D + QP VD + I++ + YS
Sbjct: 186 SVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYS 245
Query: 109 VLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
+L NQ NYWI A P + + +
Sbjct: 246 FVLNANQAVD-NYWIRA---------------------------------NPNFGNVGFN 271
Query: 169 KSFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 226
++ I G+P +P TN + T + N +N VS +P +P G +
Sbjct: 272 GGINSAILRYDGAPAVEPTTN---QTTSVKPLNEVNLHPL-----VSTPVPGSPSSGGVD 323
Query: 227 YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 286
+ AF+ NG F N + P V + SG T D++ + + P+
Sbjct: 324 KAINMAFNFNG-SNFFINGASFVPPSVPVLLQILSGA-----QTAQDLLPSGSVXVLPSN 377
Query: 287 SEIH--------------PWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP 332
+ I P+HLHGH F V+ R G A
Sbjct: 378 ASIEISFPATAAAPGAPHPFHLHGHTFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA--- 433
Query: 333 YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 373
+RF+ +NPG W HCHI+ H G VV A V V
Sbjct: 434 GDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQAEDVPDV 474
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 111/340 (32%), Gaps = 66/340 (19%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V K R R+ + H ++E D QP D + I++ + YS
Sbjct: 186 SVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYS 245
Query: 109 VLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 168
L NQ NYWI A P + + +
Sbjct: 246 FTLNANQAVD-NYWIRA---------------------------------NPNFGNVGFN 271
Query: 169 KSFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 226
++ I G+P +P TN LN N VS +P +P G +
Sbjct: 272 GGINSAILRYDGAPAVEPTTNQSTSTQPLNETNLHPL--------VSTPVPGSPAAGGVD 323
Query: 227 YGLKDAFDQNGPPENFSNEYDVMKPPV------------NANTTLGSG-VYMLGLNTTVD 273
+ AF+ NG NF PP A L SG V L N +++
Sbjct: 324 KAINMAFNFNG--SNFFINGASFTPPSVPVLLQILSGAQTAQDLLPSGSVXTLPSNASIE 381
Query: 274 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY 333
+ A +HLHGH F V+ R G A
Sbjct: 382 ISFPATAAAPGAPHP---FHLHGHVFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---G 434
Query: 334 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 373
+RF+ +NPG W HCHI+ H G VV A V V
Sbjct: 435 DNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVVQAEDVPDV 474
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 348
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 349 AFHCHIEPHFHIGMGV 364
HCHI H GM +
Sbjct: 523 LLHCHIAWHASEGMAM 538
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V+ K YRLR+ + NH + V+ D + P+ D + I G+ Y
Sbjct: 254 ELTFVEGTK-YRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYD 312
Query: 109 VLLTTNQDPSYNYWI 123
V++ N + NYWI
Sbjct: 313 VIVEANA-AADNYWI 326
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 348
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 349 AFHCHIEPHFHIGMGV 364
HCHI H G+ +
Sbjct: 523 LLHCHIAWHASEGLAM 538
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 49 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 108
++ V+ K YRLR+ + NH + V+ D + P+ D + I G+ Y
Sbjct: 254 ELTFVEGTK-YRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYD 312
Query: 109 VLLTTNQDPSYNYWI 123
V++ N + NYWI
Sbjct: 313 VIVEANA-AADNYWI 326
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 285 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 344
N ++H H HGH F RG IFP + L
Sbjct: 970 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1013
Query: 345 PGAWAFHCHIEPHFHIGM 362
PG W HCH+ H H GM
Sbjct: 1014 PGIWLLHCHVTDHIHAGM 1031
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 285 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 344
N ++H H HGH F RG IFP + L
Sbjct: 989 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1032
Query: 345 PGAWAFHCHIEPHFHIGM 362
PG W HCH+ H H GM
Sbjct: 1033 PGIWLLHCHVTDHIHAGM 1050
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 290 HPWHLHGHDFWVLG-RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 348
HP+H+HG F ++ + GK K + T + P LR D G
Sbjct: 407 HPFHIHGTQFELISSKLNGKVQKAE-------FRALRDTINVRPNEELRLRMKQDFKGLR 459
Query: 349 AFHCHIEPHFHIGM 362
+HCHI H +GM
Sbjct: 460 MYHCHILEHEDLGM 473
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 53 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLL 111
V T RLR+ +++H + ++ ADG ++ +P EV ++ + GE VL+
Sbjct: 191 VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLV 250
Query: 112 TTNQDPSY 119
++ +
Sbjct: 251 RLRKEGRF 258
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 349
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 193 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 247
Query: 350 FHCHIEPHFHIGMGVVLALGVETVGNIPN 378
+HCH++ H +GM V L L + G IP
Sbjct: 248 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 275
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 349
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 194 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 248
Query: 350 FHCHIEPHFHIGMGVVLALGVETVGNIPN 378
+HCH++ H +GM V L L + G IP
Sbjct: 249 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 276
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 349
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 231 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 285
Query: 350 FHCHIEPHFHIGMGVVLALGVETVGNIPN 378
+HCH++ H +GM V L L + G IP
Sbjct: 286 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 313
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 349
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 190 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 244
Query: 350 FHCHIEPHFHIGMGVVLALGVETVGNIPN 378
+HCH++ H +GM V L L + G IP
Sbjct: 245 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 272
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 290 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 349
H +HLHGH W R G T D+ +G+ + GAW
Sbjct: 196 HTFHLHGHR-WADNR-TGMLTGPDDPSQVIDNKI---CGPADSFGFQVIAGEGVGAGAWM 250
Query: 350 FHCHIEPHFHIGMGVVLALGVETVGNIPN 378
+HCH++ H +GM V L L + G IP
Sbjct: 251 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 278
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 287 SEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPG 346
S H +HLHGH W+ R + ++ D + +G+ + PG
Sbjct: 209 SNFHTFHLHGHR-WLDNRTGMRTSEYDPSPLIDIKDLNPGVS----FGFQVIAGEGVGPG 263
Query: 347 AWAFHCHIEPHFHIGM 362
W +HCH++ H +GM
Sbjct: 264 MWMYHCHVQNHSDMGM 279
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 218 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 264
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 218 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 264
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|1WSA|A Chain A, Structure Of L-Asparaginase Ii Precursor
pdb|1WSA|B Chain B, Structure Of L-Asparaginase Ii Precursor
Length = 330
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 190 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 249
R T LNT +N F P T +G++ YG + F Q+ P ++E+D+
Sbjct: 162 REATKLNT-TAVNAFAS----------PNTGKIGTVYYGKVEYFTQSVRPHTLASEFDIS 210
Query: 250 K 250
K
Sbjct: 211 K 211
>pdb|3UKA|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKF|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
Length = 509
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDH-------SFXLGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 395 QN 396
QN
Sbjct: 490 QN 491
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 335 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 446 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 493
Query: 395 QN 396
QN
Sbjct: 494 QN 495
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 327 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 369
T +FP+ + +NPG W CH + GM +L +
Sbjct: 668 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 710
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 327 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 369
T +FP+ + +NPG W CH + GM +L +
Sbjct: 667 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 709
>pdb|2R7E|B Chain B, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 770
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 16/80 (20%)
Query: 289 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 348
IH H GH F V + E K + ++P + + + G W
Sbjct: 391 IHSIHFSGHVFTVRKKEEYKMALYN----------------LYPGVFETVEMLPSKAGIW 434
Query: 349 AFHCHIEPHFHIGMGVVLAL 368
C I H H GM + +
Sbjct: 435 RVECLIGEHLHAGMSTLFLV 454
>pdb|3CDZ|B Chain B, Crystal Structure Of Human Factor Viii
Length = 684
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 16/80 (20%)
Query: 289 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 348
IH H GH F V + E K + ++P + + + G W
Sbjct: 305 IHSIHFSGHVFTVRKKEEYKMALYN----------------LYPGVFETVEMLPSKAGIW 348
Query: 349 AFHCHIEPHFHIGMGVVLAL 368
C I H H GM + +
Sbjct: 349 RVECLIGEHLHAGMSTLFLV 368
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 218 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 264
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSVGSELDVMAPGVSIQSTLPGGTY 214
>pdb|3NVS|A Chain A, 1.02 Angstrom Resolution Crystal Structure Of
3-Phosphoshikimate 1- Carboxyvinyltransferase From
Vibrio Cholerae In Complex With Shikimate-3-Phosphate
(Partially Photolyzed) And Glyphosate
Length = 450
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 141 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 200
L + + + L P + + SKS SN+ L T L + ++
Sbjct: 18 LYFQSNAMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHM 77
Query: 201 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 260
+N TK +N L ++ GL AF P E F P+ A LG
Sbjct: 78 LNALTKLGVN---YRLSADKTTCEVE-GLGQAFHTTQPLELFLGNAGTAMRPLAAALCLG 133
Query: 261 SGVYML 266
G Y+L
Sbjct: 134 QGDYVL 139
>pdb|4G1G|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1G|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
Length = 364
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 247 DVMKPPVNANTTLGSGVYMLGLNTTVDV 274
DV K P A GS +Y L LN T+DV
Sbjct: 185 DVYKIPTAALKVSGSSLYNLALNVTIDV 212
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 218 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 264
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 218 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 264
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1ZO2|A Chain A, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
pdb|1ZO2|B Chain B, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
Length = 129
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 186 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 245
T F + ++N N++N F + + P+P GSI + D +G P FS
Sbjct: 48 TQFQGQANIVNKFNSLN-FQRVQFEITRVDCQPSPNNGSIVFVTGDVRIDDGQPLKFSQV 106
Query: 246 YDVMKPPVNANTTLGSGVYMLGL 268
+++M P N + + ++ L L
Sbjct: 107 FNLM-PSGNGGFMIFNDLFRLNL 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,816,692
Number of Sequences: 62578
Number of extensions: 544303
Number of successful extensions: 1256
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1142
Number of HSP's gapped (non-prelim): 88
length of query: 396
length of database: 14,973,337
effective HSP length: 101
effective length of query: 295
effective length of database: 8,652,959
effective search space: 2552622905
effective search space used: 2552622905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)