Query 016030
Match_columns 396
No_of_seqs 154 out of 1478
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:41:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 6E-72 2.1E-76 574.3 41.7 384 10-394 166-549 (552)
2 3sqr_A Laccase; multicopper ox 100.0 9.9E-64 3.4E-68 510.7 38.5 331 7-386 221-564 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 2.8E-61 9.5E-66 486.9 36.1 319 7-386 162-491 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 4.4E-61 1.5E-65 485.4 36.7 318 7-386 164-491 (495)
5 1zpu_A Iron transport multicop 100.0 1.4E-59 4.8E-64 479.5 34.6 315 10-387 166-504 (534)
6 1v10_A Laccase; multicopper bl 100.0 6.6E-59 2.3E-63 473.8 34.3 314 10-388 190-513 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 7.9E-59 2.7E-63 471.6 33.6 314 11-387 165-491 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.2E-58 7.5E-63 473.4 36.0 330 8-388 192-545 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.4E-52 4.8E-57 419.3 32.7 234 49-369 188-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 3.7E-51 1.3E-55 416.8 30.2 262 11-371 201-476 (534)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 5.5E-50 1.9E-54 401.3 27.8 249 10-374 181-445 (451)
12 2wsd_A Spore coat protein A; o 100.0 1.7E-49 5.8E-54 404.0 31.3 266 10-370 229-510 (513)
13 3aw5_A Multicopper oxidase; be 100.0 9.4E-49 3.2E-53 391.8 28.6 249 11-368 169-447 (448)
14 3gyr_A PHS, phenoxazinone synt 100.0 2.2E-48 7.7E-53 405.2 31.3 289 49-372 265-593 (612)
15 2g23_A PHS, phenoxazinone synt 100.0 7.3E-48 2.5E-52 395.8 34.5 292 10-380 253-601 (612)
16 3zx1_A Oxidoreductase, putativ 100.0 1.1E-45 3.7E-50 370.9 30.1 239 49-369 222-480 (481)
17 3od3_A Blue copper oxidase CUE 100.0 2.3E-44 7.9E-49 361.2 30.3 254 11-368 183-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 6.1E-30 2.1E-34 256.5 16.4 236 49-370 195-433 (447)
19 2zwn_A Two-domain type laccase 100.0 4.9E-28 1.7E-32 233.8 17.8 231 49-369 35-276 (339)
20 3cg8_A Laccase; oxidoreductase 100.0 2.6E-28 8.8E-33 235.6 15.7 227 44-383 72-318 (343)
21 3gdc_A Multicopper oxidase; be 99.9 3.8E-26 1.3E-30 215.6 15.4 220 47-369 64-287 (288)
22 3g5w_A Multicopper oxidase typ 99.9 8.4E-26 2.9E-30 216.0 12.7 233 49-369 34-275 (318)
23 3kw8_A Laccase, putative coppe 99.9 3.8E-25 1.3E-29 207.5 15.6 218 44-371 31-266 (276)
24 3t9w_A Small laccase, multi-co 99.9 6.2E-25 2.1E-29 208.2 17.1 220 43-372 52-289 (299)
25 3tas_A Small laccase, multi-co 99.9 1.4E-23 4.9E-28 200.2 20.9 93 264-370 176-271 (313)
26 2j5w_A Ceruloplasmin, ferroxid 99.9 2.3E-24 8E-29 235.4 12.8 89 263-371 971-1059(1065)
27 2r7e_A Coagulation factor VIII 99.9 2.7E-23 9.2E-28 218.7 6.9 84 264-370 628-711 (742)
28 1sdd_B Coagulation factor V; c 99.9 6.3E-22 2.1E-26 206.7 17.0 247 45-369 65-326 (647)
29 1sdd_A Coagulation factor V; c 99.9 4.9E-24 1.7E-28 202.8 0.1 229 46-370 57-300 (306)
30 2j5w_A Ceruloplasmin, ferroxid 99.9 2.5E-21 8.4E-26 211.6 19.6 86 49-146 271-357 (1065)
31 1kbv_A ANIA, major outer membr 99.8 1.5E-19 5.3E-24 173.4 16.6 236 45-370 66-307 (327)
32 2bw4_A Copper-containing nitri 99.8 7.2E-19 2.5E-23 169.7 20.3 90 263-370 232-324 (340)
33 2r7e_B Coagulation factor VIII 99.8 4.6E-21 1.6E-25 202.1 3.1 85 264-368 370-454 (770)
34 1mzy_A Copper-containing nitri 99.8 4.1E-17 1.4E-21 157.0 19.5 90 263-370 226-318 (333)
35 1kbv_A ANIA, major outer membr 99.7 2.5E-18 8.5E-23 164.9 8.6 111 11-146 198-308 (327)
36 2zoo_A Probable nitrite reduct 99.7 1.5E-15 5E-20 151.7 18.0 234 48-369 59-296 (442)
37 1oe1_A Dissimilatory copper-co 99.7 4.5E-15 1.5E-19 142.9 19.5 91 262-370 225-318 (336)
38 2dv6_A Nitrite reductase; elec 99.6 1.1E-14 3.8E-19 145.5 18.6 221 48-371 54-282 (447)
39 2r7e_A Coagulation factor VIII 99.6 7.4E-17 2.5E-21 169.8 2.7 84 263-369 245-328 (742)
40 2zoo_A Probable nitrite reduct 99.6 1.7E-15 5.7E-20 151.3 9.2 113 10-147 187-299 (442)
41 2zwn_A Two-domain type laccase 99.6 7.2E-14 2.5E-18 134.5 17.6 110 10-146 164-278 (339)
42 3g5w_A Multicopper oxidase typ 99.6 5.3E-14 1.8E-18 134.1 15.1 110 10-146 163-277 (318)
43 1oe1_A Dissimilatory copper-co 99.4 8E-13 2.7E-17 127.1 10.2 109 11-147 209-320 (336)
44 1mzy_A Copper-containing nitri 99.3 7E-12 2.4E-16 120.3 11.0 109 11-146 209-319 (333)
45 2bw4_A Copper-containing nitri 99.3 1.7E-11 5.8E-16 118.0 11.4 109 11-146 215-325 (340)
46 2aan_A Auracyanin A; cupredoxi 99.2 2.3E-11 7.8E-16 101.7 7.1 93 263-368 36-138 (139)
47 3cvb_A Plastocyanin; cupredoxi 99.2 8.2E-11 2.8E-15 93.2 8.8 85 262-369 19-104 (105)
48 3gdc_A Multicopper oxidase; be 99.1 2.4E-10 8.2E-15 107.3 12.2 86 263-371 67-155 (288)
49 1sdd_B Coagulation factor V; c 99.1 1.1E-10 3.9E-15 121.6 9.1 71 49-126 239-310 (647)
50 2xu9_A Laccase; oxidoreductase 98.9 7.7E-09 2.6E-13 102.8 12.6 78 263-356 189-266 (439)
51 2gim_A Plastocyanin; beta shee 98.9 6.6E-09 2.3E-13 82.3 9.0 85 262-369 20-105 (106)
52 1sdd_A Coagulation factor V; c 98.8 2.2E-10 7.4E-15 108.6 -0.9 68 49-126 215-283 (306)
53 3tas_A Small laccase, multi-co 98.8 1.5E-08 5E-13 96.2 8.5 74 49-124 174-252 (313)
54 1qhq_A Protein (auracyanin); e 98.7 1.7E-08 5.8E-13 84.2 7.3 101 263-369 34-139 (140)
55 2r7e_B Coagulation factor VIII 98.7 6.4E-09 2.2E-13 109.8 3.5 70 49-125 368-438 (770)
56 1pcs_A Plastocyanin; electron 98.6 3.5E-08 1.2E-12 76.8 5.8 78 263-368 20-97 (98)
57 3kw8_A Laccase, putative coppe 98.6 7.4E-08 2.5E-12 89.7 8.6 75 49-126 168-248 (276)
58 2uxt_A Protein SUFI, SUFI; oxi 98.6 3.4E-07 1.1E-11 91.2 13.6 78 263-356 194-272 (451)
59 2plt_A Plastocyanin; electron 98.6 9.1E-08 3.1E-12 74.4 7.4 79 263-368 19-97 (98)
60 3cg8_A Laccase; oxidoreductase 98.6 1E-07 3.5E-12 91.5 9.2 75 49-126 209-289 (343)
61 1hfu_A Laccase 1; oxidoreducta 98.6 7.1E-07 2.4E-11 90.1 15.8 224 48-355 33-263 (503)
62 1v10_A Laccase; multicopper bl 98.6 7.7E-07 2.6E-11 90.2 15.6 233 45-355 51-290 (521)
63 3t9w_A Small laccase, multi-co 98.6 1.5E-07 5.1E-12 88.7 8.9 77 47-125 188-269 (299)
64 1bxv_A Plastocyanin; copper pr 98.5 3E-07 1E-11 70.3 8.5 71 263-368 20-90 (91)
65 3pxl_A Laccase; 4-copper prote 98.5 1.4E-06 4.7E-11 87.7 15.2 226 47-354 32-263 (499)
66 1b3i_A PETE protein, protein ( 98.5 1.2E-07 3.9E-12 73.7 4.6 77 263-368 20-96 (97)
67 3t6v_A Laccase; beta barrel, o 98.5 3.3E-06 1.1E-10 84.9 16.1 228 47-354 33-266 (495)
68 1iby_A Nitrosocyanin; RED copp 98.4 1.4E-06 4.7E-11 69.5 9.2 72 263-368 39-110 (112)
69 1aoz_A Ascorbate oxidase; oxid 98.3 5.5E-06 1.9E-10 84.6 14.8 90 263-371 35-124 (552)
70 1byp_A Protein (plastocyanin); 98.3 1.8E-06 6.1E-11 67.1 8.7 81 263-368 18-98 (99)
71 4hci_A Cupredoxin 1; structura 98.3 4.4E-06 1.5E-10 65.1 9.3 71 263-368 29-99 (100)
72 1kdj_A Plastocyanin; electron 98.2 2.3E-06 7.9E-11 66.9 7.2 84 262-368 17-101 (102)
73 2q9o_A Laccase-1; multicopper 98.1 1.3E-05 4.3E-10 82.0 10.6 90 262-370 67-157 (559)
74 1plc_A Plastocyanin; electron 98.0 9.1E-06 3.1E-10 63.1 6.9 81 263-368 18-98 (99)
75 2cal_A Rusticyanin; iron respi 97.9 2.9E-05 9.9E-10 65.5 8.7 84 262-368 61-153 (154)
76 3sqr_A Laccase; multicopper ox 97.9 4.3E-05 1.5E-09 78.0 11.2 89 262-369 98-186 (580)
77 1zpu_A Iron transport multicop 97.9 4.1E-05 1.4E-09 77.7 10.8 91 262-371 34-125 (534)
78 1fwx_A Nitrous oxide reductase 97.9 5.1E-05 1.8E-09 77.1 10.7 78 262-371 513-593 (595)
79 3aw5_A Multicopper oxidase; be 97.8 3.9E-05 1.3E-09 76.2 7.9 85 262-371 38-127 (448)
80 3zx1_A Oxidoreductase, putativ 97.8 0.00011 3.6E-09 73.6 10.9 85 262-371 82-172 (481)
81 3od3_A Blue copper oxidase CUE 97.8 5.3E-05 1.8E-09 75.8 8.5 67 50-117 393-462 (488)
82 2ov0_A Amicyanin; beta-sandwic 97.7 0.00019 6.4E-09 56.3 8.7 71 263-368 34-104 (105)
83 3abg_A Bilirubin oxidase; clea 97.5 0.00023 7.9E-09 72.1 8.2 86 261-371 68-158 (534)
84 1iuz_A Plastocyanin; electron 97.1 0.0025 8.7E-08 48.9 8.9 79 263-368 19-97 (98)
85 2g23_A PHS, phenoxazinone synt 97.1 0.0014 5E-08 67.2 9.0 74 49-124 472-572 (612)
86 3tu6_A Pseudoazurin (blue copp 97.0 0.0013 4.3E-08 53.4 6.8 36 331-370 61-96 (127)
87 3erx_A Pseudoazurin; copper pr 97.0 0.0023 8E-08 51.5 8.0 73 263-370 22-94 (123)
88 2aan_A Auracyanin A; cupredoxi 97.0 0.0011 3.7E-08 54.6 6.1 71 45-124 31-122 (139)
89 2wsd_A Spore coat protein A; o 97.0 0.0013 4.3E-08 66.4 7.5 96 262-371 58-177 (513)
90 3ef4_A Pseudoazurin, blue copp 96.9 0.0025 8.5E-08 51.4 7.3 73 263-370 23-95 (124)
91 1id2_A Amicyanin; beta barrel, 96.7 0.0067 2.3E-07 47.3 8.3 71 263-368 35-105 (106)
92 3c75_A Amicyanin; copper prote 96.5 0.01 3.5E-07 48.3 8.3 71 263-368 61-131 (132)
93 1paz_A Pseudoazurin precursor; 96.4 0.011 3.9E-07 47.4 8.1 36 331-370 59-94 (123)
94 1pmy_A Pseudoazurin; electron 96.3 0.011 3.8E-07 47.5 7.4 37 330-370 58-94 (123)
95 3gyr_A PHS, phenoxazinone synt 96.3 0.0081 2.8E-07 61.7 8.3 42 329-370 148-194 (612)
96 3sbq_A Nitrous-oxide reductase 95.9 0.041 1.4E-06 55.3 10.5 79 262-370 558-637 (638)
97 1iby_A Nitrosocyanin; RED copp 95.8 0.039 1.3E-06 43.1 8.2 59 47-124 36-94 (112)
98 1nwp_A Azurin; electron transp 95.6 0.0035 1.2E-07 50.8 1.3 80 45-124 14-111 (128)
99 3ay2_A Lipid modified azurin p 95.5 0.044 1.5E-06 46.3 8.0 95 263-368 59-165 (167)
100 2cua_A Protein (CUA); CUA cent 95.3 0.1 3.6E-06 42.4 9.4 69 264-368 62-133 (135)
101 2ccw_A Azurin II, AZN-2; elect 95.3 0.011 3.9E-07 47.8 3.5 79 45-124 14-111 (129)
102 1cuo_A Protein (azurin ISO-2); 95.1 0.15 5E-06 41.2 9.7 96 262-368 18-127 (129)
103 2ux6_A Pseudoazurin; type-1 co 95.0 0.068 2.3E-06 42.7 7.4 34 331-370 59-92 (122)
104 4hci_A Cupredoxin 1; structura 95.0 0.099 3.4E-06 39.9 8.0 59 47-124 26-84 (100)
105 2iaa_C Azurin; quinoprotein, t 94.4 0.026 8.8E-07 45.6 3.4 80 45-124 13-110 (128)
106 1qhq_A Protein (auracyanin); e 94.3 0.079 2.7E-06 43.2 6.2 71 46-124 30-121 (140)
107 3cvb_A Plastocyanin; cupredoxi 94.0 0.034 1.2E-06 42.7 3.3 72 47-124 17-88 (105)
108 3fsa_A Azurin; copper, cupredo 94.0 0.0093 3.2E-07 47.8 -0.1 77 45-123 14-110 (125)
109 1cuo_A Protein (azurin ISO-2); 93.6 0.058 2E-06 43.6 3.9 76 45-124 14-111 (129)
110 3s8f_B Cytochrome C oxidase su 93.3 0.42 1.4E-05 40.3 9.0 72 263-368 94-166 (168)
111 2gim_A Plastocyanin; beta shee 93.0 0.041 1.4E-06 42.4 2.1 68 46-124 17-89 (106)
112 2ccw_A Azurin II, AZN-2; elect 92.9 0.65 2.2E-05 37.3 9.2 97 262-369 18-128 (129)
113 1nwp_A Azurin; electron transp 92.8 0.79 2.7E-05 36.7 9.6 96 262-368 18-127 (128)
114 3ay2_A Lipid modified azurin p 92.7 0.11 3.7E-06 43.9 4.4 76 45-124 54-149 (167)
115 2iaa_C Azurin; quinoprotein, t 92.5 0.66 2.2E-05 37.2 8.7 97 262-369 17-127 (128)
116 3fsa_A Azurin; copper, cupredo 92.1 0.93 3.2E-05 36.1 8.9 93 262-368 18-124 (125)
117 1kdj_A Plastocyanin; electron 89.6 0.21 7.3E-06 38.0 3.0 65 46-124 14-86 (102)
118 1b3i_A PETE protein, protein ( 89.0 0.57 1.9E-05 35.1 5.0 63 47-124 17-81 (97)
119 2plt_A Plastocyanin; electron 87.3 1.1 3.9E-05 33.4 5.8 67 47-124 16-82 (98)
120 1bxv_A Plastocyanin; copper pr 86.6 2.1 7.3E-05 31.3 6.9 59 47-124 17-75 (91)
121 1iuz_A Plastocyanin; electron 86.4 0.98 3.4E-05 34.0 5.0 65 46-124 15-82 (98)
122 2cal_A Rusticyanin; iron respi 86.3 0.98 3.4E-05 37.4 5.3 73 49-125 61-137 (154)
123 1pcs_A Plastocyanin; electron 85.7 0.96 3.3E-05 33.9 4.6 66 47-124 17-82 (98)
124 1fwx_A Nitrous oxide reductase 84.6 2.9 9.8E-05 42.4 8.7 63 45-125 509-573 (595)
125 2ov0_A Amicyanin; beta-sandwic 82.7 1.5 5E-05 33.5 4.5 60 47-124 31-91 (105)
126 1plc_A Plastocyanin; electron 81.3 1.1 3.7E-05 33.7 3.2 64 47-124 15-83 (99)
127 1byp_A Protein (plastocyanin); 80.7 1.2 4.1E-05 33.4 3.3 64 47-124 15-83 (99)
128 2r39_A FIXG-related protein; s 72.5 8.4 0.00029 29.9 6.3 47 57-113 33-81 (118)
129 3c75_A Amicyanin; copper prote 72.1 4 0.00014 32.6 4.3 62 45-124 56-118 (132)
130 3sbq_A Nitrous-oxide reductase 71.5 14 0.00049 37.1 8.9 61 46-124 555-617 (638)
131 3erx_A Pseudoazurin; copper pr 71.1 1.8 6.2E-05 34.3 2.0 59 47-124 19-77 (123)
132 1id2_A Amicyanin; beta barrel, 70.7 4.8 0.00016 30.6 4.3 60 47-124 32-92 (106)
133 1cyx_A CYOA; electron transpor 69.3 12 0.0004 32.3 6.9 71 262-366 41-112 (205)
134 3isy_A Bsupi, intracellular pr 67.8 42 0.0014 26.2 11.8 75 55-130 16-104 (120)
135 2cua_A Protein (CUA); CUA cent 60.9 26 0.00088 27.9 7.0 57 48-124 59-115 (135)
136 3hb3_B Cytochrome C oxidase su 60.6 25 0.00085 32.2 7.7 72 262-367 189-261 (298)
137 1gui_A Laminarinase 16A; carbo 58.3 69 0.0024 25.5 10.0 58 50-115 66-125 (155)
138 2gsm_B Cytochrome C oxidase su 57.6 30 0.001 31.1 7.6 73 261-367 170-243 (262)
139 1paz_A Pseudoazurin precursor; 56.4 4.9 0.00017 31.7 1.9 59 47-124 19-77 (123)
140 3tu6_A Pseudoazurin (blue copp 55.8 3.6 0.00012 32.7 1.1 59 47-124 21-79 (127)
141 2f1e_A Protein APAG; APAG prot 51.2 43 0.0015 26.4 6.7 46 58-109 32-84 (127)
142 1xvs_A Protein APAG; MCSG APC2 50.1 39 0.0013 26.6 6.3 13 58-70 31-43 (126)
143 3s8f_B Cytochrome C oxidase su 49.9 49 0.0017 27.5 7.2 57 48-124 92-148 (168)
144 1pmy_A Pseudoazurin; electron 49.4 5.9 0.0002 31.2 1.3 59 47-124 19-77 (123)
145 1tza_A APAG protein, SOR45; st 48.6 39 0.0013 27.0 6.0 46 58-109 31-83 (134)
146 2ux6_A Pseudoazurin; type-1 co 47.5 9.7 0.00033 29.9 2.3 59 47-124 19-77 (122)
147 1v54_B Cytochrome C oxidase po 47.0 42 0.0015 29.3 6.7 72 261-366 139-211 (227)
148 3p6b_A Cellulose 1,4-beta-cell 43.5 89 0.0031 26.7 8.1 57 51-115 98-160 (205)
149 2wtp_A ORF131 protein, CZCE; m 42.8 10 0.00034 30.2 1.7 23 50-72 72-94 (131)
150 2xjp_A Flocculin-5, flocculati 38.7 74 0.0025 28.4 7.0 31 49-79 193-225 (258)
151 1gu3_A Endoglucanase C; carboh 37.3 63 0.0021 26.1 5.8 28 50-77 51-79 (149)
152 1fft_B Ubiquinol oxidase; elec 35.1 47 0.0016 30.6 5.2 71 263-367 152-223 (315)
153 4ay0_A Chaperone protein CAF1M 34.2 63 0.0021 28.0 5.7 22 47-68 64-85 (218)
154 3gfu_C Chaperone protein FAEE; 34.0 44 0.0015 29.2 4.6 22 47-68 52-73 (224)
155 3idu_A Uncharacterized protein 32.8 1.8E+02 0.006 22.7 11.7 69 52-129 28-98 (127)
156 3q48_A Chaperone CUPB2; IG fol 31.4 34 0.0012 30.6 3.5 22 47-68 83-104 (257)
157 3k4z_A Glycoside hydrolase fam 30.2 2E+02 0.0069 25.9 8.6 58 50-115 76-139 (289)
158 4djm_A DRAB; chaperone, PILI; 29.5 47 0.0016 29.3 4.0 22 47-68 72-93 (239)
159 4gio_A Putative lipoprotein; u 28.0 2E+02 0.0067 21.8 7.9 68 55-126 34-104 (107)
160 2oyz_A UPF0345 protein VPA0057 28.0 1.3E+02 0.0046 22.2 5.6 56 50-109 17-73 (94)
161 3o0l_A Uncharacterized protein 28.0 1.2E+02 0.0041 23.2 5.7 47 80-126 59-107 (112)
162 2co7_B SAFB chaperone, putativ 26.9 71 0.0024 27.7 4.7 21 47-67 62-82 (221)
163 3eo6_A Protein of unknown func 26.1 1.3E+02 0.0045 22.8 5.4 68 50-126 29-97 (106)
164 1klf_A FIMC chaperone, chapero 25.8 65 0.0022 27.6 4.2 21 47-67 51-72 (205)
165 1l4i_A SFAE protein; periplasm 25.4 61 0.0021 27.8 4.0 21 47-67 51-72 (206)
166 2p9r_A Alpha-2-M, alpha-2-macr 24.9 68 0.0023 23.6 3.7 70 53-127 13-84 (102)
167 2xg5_A PAPD, chaperone protein 24.9 54 0.0018 28.4 3.6 21 47-67 53-73 (218)
168 4gq7_A Flocculin, LG-FLO1P; ca 22.7 80 0.0028 27.5 4.2 32 49-80 158-191 (224)
169 1x9u_A Umecyanin; cupredoxin, 22.2 93 0.0032 24.0 4.1 32 339-370 73-105 (116)
170 3lae_A UPF0053 protein HI0107; 21.9 85 0.0029 22.2 3.6 23 74-96 56-78 (81)
171 4asl_A EPA1P; cell adhesion, l 21.9 93 0.0032 27.4 4.6 29 49-77 195-225 (259)
172 3pu9_A Protein serine/threonin 20.8 1.7E+02 0.0059 25.2 6.2 30 60-91 109-138 (242)
173 3t91_A Stage II sporulation pr 20.2 1.4E+02 0.0048 25.5 5.4 46 59-106 105-155 (242)
174 2yev_B Cytochrome C oxidase su 24.4 24 0.00081 32.9 0.0 63 262-358 141-203 (337)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=6e-72 Score=574.28 Aligned_cols=384 Identities=66% Similarity=1.185 Sum_probs=292.6
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
..+++||||++.++|+..+.+.. ....|+......+.++.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||+
T Consensus 166 ~~~~~liNG~~~~~c~~~~~~~~-~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 244 (552)
T 1aoz_A 166 EPQTILLNGRGQFDCSIAAKYDS-NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGN 244 (552)
T ss_dssp SCSEEEETTBCCSSSBTTGGGCT-TSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTE
T ss_pred CCCeEEECCccccCcccCccccc-ccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCc
Confidence 35799999999999976543221 23457654344456668999999999999999999999999999999999999999
Q ss_pred eeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccc
Q 016030 90 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 169 (396)
Q Consensus 90 ~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~ 169 (396)
+++|+.+++|.|++||||||||++++.+.++|||++....+........|+|+|.++.....+....+..+.+++.....
T Consensus 245 ~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~ 324 (552)
T 1aoz_A 245 YVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSK 324 (552)
T ss_dssp EEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHH
T ss_pred ccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccc
Confidence 99999999999999999999999943333499999987654344556889999976543222322334444455433222
Q ss_pred cccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCC
Q 016030 170 SFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 249 (396)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (396)
.+....+.....+.++...++++.+.......++...|+|||.+|..|..|+|.+...++.+.|+...++..+...+++.
T Consensus 325 ~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~ 404 (552)
T 1aoz_A 325 NFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDID 404 (552)
T ss_dssp HHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTT
T ss_pred cccccccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccc
Confidence 22211111111112334567787765544444556789999999999999999999888877776554433332223332
Q ss_pred CCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEE
Q 016030 250 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAV 329 (396)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~ 329 (396)
.+..+...+.++.++.++.|++|+|+|+|.+.+..+....||||||||+||||++|.|.|++.+...+|+.+|+|||||.
T Consensus 405 ~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~ 484 (552)
T 1aoz_A 405 TPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVV 484 (552)
T ss_dssp SCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEE
T ss_pred cccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEE
Confidence 22223345667788999999999999999864411124579999999999999999999987556779999999999999
Q ss_pred eCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccCCCCccccccccccccCCCC
Q 016030 330 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 394 (396)
Q Consensus 330 vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~c~~~~~~~~~~~ 394 (396)
|+++||++|||+|||||.|+|||||+||++.|||++|.|++++++++|++++.|+.....+++++
T Consensus 485 vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~ 549 (552)
T 1aoz_A 485 IFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNP 549 (552)
T ss_dssp ECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCC
T ss_pred eCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999888777765
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=9.9e-64 Score=510.69 Aligned_cols=331 Identities=24% Similarity=0.369 Sum_probs=243.1
Q ss_pred CCCCCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe
Q 016030 7 SPQGHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 86 (396)
Q Consensus 7 ~~~~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~ 86 (396)
.+...+++||||+++++|+... ..+|.. ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+
T Consensus 221 ~~~~~d~~liNG~~~~~c~~~~------~~~~~~----~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~ 290 (580)
T 3sqr_A 221 APPALENTLMNGTNTFDCSAST------DPNCVG----GGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIAN 290 (580)
T ss_dssp CCCCBSEEEETTBCCCCCTTCC------CTTBCC----CCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEE
T ss_pred CCCCCceEEECCcccCCCcccc------cccccc----CCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEe
Confidence 3556789999999999997531 245653 334578999999999999999999999999999999999999
Q ss_pred CCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCC---CCCCcceEEEEccCCCCCCCCCCCCCCCCCC
Q 016030 87 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWD 163 (396)
Q Consensus 87 DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~---~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~ 163 (396)
||.+++|+.+++|.|++||||||||++++.++ +||||+.....+. ......|||+|.++.. ..|. .+.+.
T Consensus 291 DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~-~~P~-----~~~~~ 363 (580)
T 3sqr_A 291 DLVPIVPYTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSI-ANPT-----SVGTT 363 (580)
T ss_dssp TTEEEEEEEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCC-CCCC-----CCCCC
T ss_pred CCccCCceEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCC-CCCC-----CCCCC
Confidence 99999999999999999999999999998765 9999997664321 1235689999965432 1122 22222
Q ss_pred CCcccccccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcC-CCCCchhhhhccCCCCCCCCCCCCCC
Q 016030 164 DYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENF 242 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~-p~~p~l~~~~~~~~~~~~~~~~~~~~ 242 (396)
......+.....+........+...+.++.+.. ...+...|+|||.+|.. +..|+|.++..|. ..|
T Consensus 364 ~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~---~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~----------~~~ 430 (580)
T 3sqr_A 364 PRGTCEDEPVASLVPHLALDVGGYSLVDEQVSS---AFTNYFTWTINSSSLLLDWSSPTTLKIFNNE----------TIF 430 (580)
T ss_dssp CCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEE---EESSSEEEEETTBCCCCCTTSCHHHHHHTTC----------CCC
T ss_pred ccchhhcccccccccCCCCCCCCccceEEEEEe---ccCCceeEEECCEecccCCCCCchhhhhcCC----------ccC
Confidence 111111110011111111111222233333321 12356789999999974 5889888765431 112
Q ss_pred CCCCCCCCCCCCCCcccccceEEe----ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccc
Q 016030 243 SNEYDVMKPPVNANTTLGSGVYML----GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKF 317 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~-~~~~~ 317 (396)
+.. ..++.+ +.|++|||+|+|.+.+ ...||||||||+|+||++|.|.|+++ ++..+
T Consensus 431 ~~~---------------~~~~~~~~~~~~~~~VeiVi~n~~~~----~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~ 491 (580)
T 3sqr_A 431 PTE---------------YNVVALEQTNANEEWVVYVIEDLTGF----GIWHPIHLHGHDFFIVAQETDVFNSDESPAKF 491 (580)
T ss_dssp CGG---------------GCEEEECC----CCEEEEEEEECSSS----CCCEEEEESSCCEEEEEEESSCCCTTTSGGGC
T ss_pred CCC---------------cceeecccccCCCcEEEEEEeCCCcc----ccceeeEecCceEEEEecCCCccCcccccccc
Confidence 211 124444 4699999999997632 46999999999999999999999865 45779
Q ss_pred CCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccC---CCCc-ccccccc
Q 016030 318 NLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLT 386 (396)
Q Consensus 318 n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~c~~~ 386 (396)
|+.||++||||.|+++||++|||++||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|...
T Consensus 492 nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 492 NLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANW 564 (580)
T ss_dssp CCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHH
T ss_pred ccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHH
Confidence 9999999999999999999999999999999999999999999999999999988865 3444 3578554
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.8e-61 Score=486.85 Aligned_cols=319 Identities=25% Similarity=0.440 Sum_probs=232.6
Q ss_pred CCCCCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe
Q 016030 7 SPQGHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 86 (396)
Q Consensus 7 ~~~~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~ 86 (396)
.|...+++||||+|++.|.. ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+
T Consensus 162 ~p~~~d~~liNG~~~~~~~~------------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~ 223 (499)
T 3pxl_A 162 FPGGADATLINGKGRAPSDS------------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEV 223 (499)
T ss_dssp SCSSCSEEEETTBCCCTTCT------------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEE
T ss_pred CCCCCcEEEECCCCcCCCCC------------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEE
Confidence 34467899999999988742 223468999999999999999999999999999999999999
Q ss_pred CCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCC--CCcceEEEEccCCCCCCCCCCCCCCCCCCC
Q 016030 87 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT--PPALTLLNYHPTSASKIPLSPPPITPRWDD 164 (396)
Q Consensus 87 DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~--~~~~~il~y~~~~~~~~p~~~~~~~~~~~~ 164 (396)
||.+++|+.+++|.|++||||||||++++..+ +||||+.....+... ....|+|+|.++... .|.+... .....
T Consensus 224 DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~-~p~~~~~--~~~~~ 299 (499)
T 3pxl_A 224 DSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVGFDGGINSAILRYDGAPAV-EPTTNQT--TSVKP 299 (499)
T ss_dssp TTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCSCGGGTTEEEEEETTSCSS-CCCCCCC--CCSSB
T ss_pred CCcccCceEeeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccccCCCceEEEEEeCCCCCC-CCCCCCC--CCCcc
Confidence 99999999999999999999999999998665 999999765322221 234699999754321 1211110 11111
Q ss_pred CcccccccccccccCCCCC--CCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCC
Q 016030 165 YDHSKSFSNKIFALMGSPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 242 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~ 242 (396)
. .+.....+.....+. .+...++++.+... ..+ ..|+|||++|..|+.|+|.+...+..... .
T Consensus 300 ~---~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~---~~~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-------~- 364 (499)
T 3pxl_A 300 L---NEVDLHPLVSTPVPGAPSSGGVDKAINMAFN---FNG-SNFFINGASFVPPTVPVLLQILSGAQTAQ-------D- 364 (499)
T ss_dssp C---CGGGCCBSSCCCCSSCSSTTCSSEEEECCEE---ECS-SCEEETTBCCCCCSSCHHHHHHTTCCSTT-------T-
T ss_pred c---ccccccccccccCCCcccCCCCcEEEEEEEE---ecC-cEEEEcCEecCCCCCchhhhhhcCCcccc-------c-
Confidence 1 111111111111111 12235666654322 122 37999999999999999887765422110 0
Q ss_pred CCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCC
Q 016030 243 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 322 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p 322 (396)
......++.++.|++|+|+|+|... .....||||||||+|+||+.++ ...+|+.||
T Consensus 365 --------------~~~~~~v~~~~~g~~V~ivl~~~~n---~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P 420 (499)
T 3pxl_A 365 --------------LLPSGSVYVLPSNASIEISFPATAA---APGAPHPFHLHGHTFAVVRSAG-------STVYNYDNP 420 (499)
T ss_dssp --------------SSSTTSEEEECTTCEEEEEEECCTT---SCSCSCEEEETTCCEEEEECTT-------CCCCCSSSC
T ss_pred --------------cCCCceeEEecCCCEEEEEEecCcc---cCCCCccceecCCcEEEEeccC-------CcccccCCC
Confidence 0112357899999999999994211 1256899999999999998742 235788999
Q ss_pred CccceEEeCC---CcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccC---CCCc-ccccccc
Q 016030 323 PLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLT 386 (396)
Q Consensus 323 ~~rDTv~vp~---~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~c~~~ 386 (396)
+||||+.|++ ++|++|||+|||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|...
T Consensus 421 ~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~ 491 (499)
T 3pxl_A 421 IFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCPTY 491 (499)
T ss_dssp CEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHHHH
T ss_pred CccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhhHh
Confidence 9999999997 8999999999999999999999999999999999999988864 5655 4588654
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=4.4e-61 Score=485.37 Aligned_cols=318 Identities=25% Similarity=0.413 Sum_probs=232.2
Q ss_pred CCCCCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe
Q 016030 7 SPQGHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 86 (396)
Q Consensus 7 ~~~~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~ 86 (396)
.|...+++||||+|++.|.. .....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+
T Consensus 164 ~p~~~d~~liNG~g~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~ 226 (495)
T 3t6v_A 164 GAITADSTLIDGLGRTHVNV-----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIET 226 (495)
T ss_dssp SCCCCSEEEETTBCCBSSSC-----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEE
T ss_pred CCCCCcEEEECCcCcCCCCc-----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEe
Confidence 35567899999999987742 0223468999999999999999999999999999999999999
Q ss_pred CCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCC--CCcceEEEEccCCCCCCCCCCCCCCCCCCC
Q 016030 87 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT--PPALTLLNYHPTSASKIPLSPPPITPRWDD 164 (396)
Q Consensus 87 DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~--~~~~~il~y~~~~~~~~p~~~~~~~~~~~~ 164 (396)
||.+++|+.+++|.|++||||||||++++..+ +||||+.....+... ....|+|+|.++... .|....+. .....
T Consensus 227 DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~-~p~~~~~~-~~~~~ 303 (495)
T 3t6v_A 227 DGVDSQELTVDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEGFDGGINSAILRYDGATTA-DPVTVAST-VHTKC 303 (495)
T ss_dssp TTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCSCGGGTTEEEEEETTSCSS-CCCCCCCS-SCSSB
T ss_pred CCcccCCEEeeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccccCCCceEEEEEECCCCCC-CCCCCCCC-CCccc
Confidence 99999999999999999999999999998665 999999765322221 234699999754322 12111111 01111
Q ss_pred CcccccccccccccCCCCC--CCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCC
Q 016030 165 YDHSKSFSNKIFALMGSPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 242 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~ 242 (396)
.. +.....+.....+. .+...++++.+.... .+ ..|+|||++|..|+.|+|.+...+..... .
T Consensus 304 ~~---~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-------~- 368 (495)
T 3t6v_A 304 LI---ETDLHPLSRNGVPGNPHQGGADCNLNLSLGF---AC-GNFVINGVSFTPPTVPVLLQICSGANTAA-------D- 368 (495)
T ss_dssp CC---GGGCCBSSCCCCSSCSSTTCSSEEEECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHTTCCSST-------T-
T ss_pred cc---cccccccccccCCCccCCCCCcEEEEEEEEe---cC-cEEEEcCEecCCCCCcchhhhhcCCcCcc-------c-
Confidence 11 11111111111111 112345565443211 12 27999999999999999888765432110 0
Q ss_pred CCCCCCCCCCCCCCcccccceEEeecCCEEEEEEe-cCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCC
Q 016030 243 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKN 321 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~-N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~ 321 (396)
......++.++.|++|+|+|+ |.+ .+.||||||||+|+||+.++ ...+|+.|
T Consensus 369 --------------~~~~~~v~~~~~g~~V~ivl~~n~~------~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~ 421 (495)
T 3t6v_A 369 --------------LLPSGSVISLPSNSTIEIALPAGAA------GGPHPFHLHGHDFAVSESAS-------NSTSNYDD 421 (495)
T ss_dssp --------------SSSTTSEEEECTTCEEEEEEECCSS------SCCCEEEETTCCEEEEECTT-------CCCCCSSS
T ss_pred --------------ccCCcceEEecCCCEEEEEEccCCC------CCCcceeecCCcEEEEecCC-------CCCcccCC
Confidence 011235789999999999998 443 56999999999999998742 23478899
Q ss_pred CCccceEEeCC-CcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccC---CCCc-ccccccc
Q 016030 322 PPLKNTAVIFP-YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLT 386 (396)
Q Consensus 322 p~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~c~~~ 386 (396)
|+|||||.|++ ++|++|||+|||||.|+|||||+||++.||+++|+|+++++++ +|+. ...|...
T Consensus 422 P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~ 491 (495)
T 3t6v_A 422 PIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSY 491 (495)
T ss_dssp CCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHh
Confidence 99999999997 8999999999999999999999999999999999999987754 5655 4588654
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-59 Score=479.54 Aligned_cols=315 Identities=26% Similarity=0.381 Sum_probs=228.2
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
-.+++||||+.. +.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||+
T Consensus 166 ~~d~~liNG~~~---------------------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 218 (534)
T 1zpu_A 166 IPQNLIVNNTMN---------------------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGI 218 (534)
T ss_dssp CCSEEEETTBSS---------------------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTE
T ss_pred CCceEEECCCCc---------------------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCc
Confidence 357999999864 36999999999999999999999999999999999999999
Q ss_pred eeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCC----C--CCCCcceEEEEccCCCCCCCCCCCCCCCCCC
Q 016030 90 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK----P--ATPPALTLLNYHPTSASKIPLSPPPITPRWD 163 (396)
Q Consensus 90 ~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~----~--~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~ 163 (396)
+++|+.+++|.|++||||||||++++.++++|||++.....+ + ......++|+|.++... +. ++....+.
T Consensus 219 ~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~--p~--~~~~~~~~ 294 (534)
T 1zpu_A 219 TTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL--PT--QNYVDSID 294 (534)
T ss_dssp EEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB--CC--CCCCSCSS
T ss_pred CccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC--CC--CCcccccc
Confidence 999999999999999999999999876556999998765321 1 12345689999654311 11 11111111
Q ss_pred C-CcccccccccccccCCCCCCCCccceEEEEeeccc-ccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCC
Q 016030 164 D-YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPEN 241 (396)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~ 241 (396)
. +. +...... .. ...+...++++.+..... ..++...|+|||++|..|+.|+|.+...+- .+.. .+..
T Consensus 295 ~~~~---~~~l~p~--~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~--~~~~--~~~~ 364 (534)
T 1zpu_A 295 NFLD---DFYLQPY--EK-EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSG--DQAN--NSEI 364 (534)
T ss_dssp CSCC---GGGCCBS--SC-CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSG--GGTT--CGGG
T ss_pred cccc---cccceeC--CC-CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecccC--cccC--CCcc
Confidence 1 10 0011111 11 111234566766543322 134556899999999999999887664321 1100 0000
Q ss_pred CCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCC----------CCCc
Q 016030 242 FSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG----------KFTK 311 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g----------~~~~ 311 (396)
| ..++..+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|+.
T Consensus 365 ~---------------~~~~~~~~~~~g~~v~ivi~N~~------~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~ 423 (534)
T 1zpu_A 365 Y---------------GSNTHTFILEKDEIVEIVLNNQD------TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDP 423 (534)
T ss_dssp G---------------CSSSCEEEECTTCEEEEEEEECS------SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBT
T ss_pred c---------------CCCceEEEeCCCCEEEEEEeCCC------CCCCCeEecCCceEEEeecCCccccccCcccccCc
Confidence 1 11245789999999999999976 469999999999999999865 3432
Q ss_pred ccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccC-----CCCc-cccccc
Q 016030 312 EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPNQ-ALACGL 385 (396)
Q Consensus 312 ~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~-----~P~~-~~~c~~ 385 (396)
.... ..+.+|+|||||.|+++||++|||++||||.|+|||||+||++.|||++|+|+++++++ +|+. .+.|..
T Consensus 424 ~~~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~ 502 (534)
T 1zpu_A 424 DNHP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQS 502 (534)
T ss_dssp TBCC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHH
T ss_pred cccc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhc
Confidence 2211 22578999999999999999999999999999999999999999999999999876643 5644 568855
Q ss_pred cc
Q 016030 386 TG 387 (396)
Q Consensus 386 ~~ 387 (396)
..
T Consensus 503 ~~ 504 (534)
T 1zpu_A 503 CS 504 (534)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=6.6e-59 Score=473.83 Aligned_cols=314 Identities=27% Similarity=0.453 Sum_probs=229.4
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
..+++||||+++++|+.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||+
T Consensus 190 ~~d~~liNG~~~~~~~~~-----------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 252 (521)
T 1v10_A 190 APDTTLINGLGRNSANPS-----------------AGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 252 (521)
T ss_dssp CCSEEEETTBCCCSSCGG-----------------GSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred CCCEEEECCcccCCCCCC-----------------CCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCc
Confidence 468999999999988621 122368999999999999999999999999999999999999999
Q ss_pred eeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCC--CCcceEEEEccCCCCCCCCCCCCCCCCCCCCcc
Q 016030 90 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT--PPALTLLNYHPTSASKIPLSPPPITPRWDDYDH 167 (396)
Q Consensus 90 ~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~--~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~ 167 (396)
+++|+.+++|.|++||||||+|++++.+| +|||++......... ....++|+|.+.... .|..... ....+..
T Consensus 253 ~~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~-~p~~~~~---~~~~~~~ 327 (521)
T 1v10_A 253 SHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNGFTGGINSAIFRYQGAAVA-EPTTSQN---SGTALNE 327 (521)
T ss_dssp EEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCSCGGGTTEEEEEETTCCSC-CCCCCCC---CSCBCCG
T ss_pred cccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeeccccccccCCCCceeEEEEECCCCCC-CCCCCCC---cccccch
Confidence 99999999999999999999999988665 899999765321111 123599999754322 1211110 1111110
Q ss_pred cccccccccccCCCCCC--CCccceEEEEeecccccCCe-EEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCC
Q 016030 168 SKSFSNKIFALMGSPKP--PTNFHRRLTLLNTQNTINGF-TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 244 (396)
Q Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~g~-~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~ 244 (396)
...........+.. +...+.++.+... .++. ..|+|||++|..+..|+|.+...+.... ..|
T Consensus 328 ---~~l~p~~~~~~p~~~~~~~~~~~~~l~~~---~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~-------~~~-- 392 (521)
T 1v10_A 328 ---ANLIPLINPGAPGNPVPGGADINLNLRIG---RNATTADFTINGAPFIPPTVPVLLQILSGVTNP-------NDL-- 392 (521)
T ss_dssp ---GGCCBSSCCCCSSCSSTTCSSEEEECCEE---CCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCG-------GGS--
T ss_pred ---hhcccCCcccCCCcccCCcceEEEEEEEe---cCCceeEEEECCCcccCCCCchhhhhhcCCccc-------ccC--
Confidence 00011100111111 1123444433211 1222 3699999999988888887765432110 011
Q ss_pred CCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCc
Q 016030 245 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 324 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~ 324 (396)
..+..++.++.|++++|+|+| . +.||||||||+||||+++.+. .+|+.+|+|
T Consensus 393 -------------~~~~~~~~v~~g~~vei~l~N-~-------~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~ 444 (521)
T 1v10_A 393 -------------LPGGAVISLPANQVIEISIPG-G-------GNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVR 444 (521)
T ss_dssp -------------SSTTTEEEECTTCEEEEEEEC-C-------BSCEEEESSCCEEEEECTTCS-------CCCCSSCCE
T ss_pred -------------CCCceEEEecCCCEEEEEEcC-C-------CCCCEEEccceEEEEecCCCC-------ccccCCCCe
Confidence 123467899999999999999 3 489999999999999997653 357889999
Q ss_pred cceEEe-CCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecccccc---CCCC-cccccccccc
Q 016030 325 KNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QALACGLTGK 388 (396)
Q Consensus 325 rDTv~v-p~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~---~~P~-~~~~c~~~~~ 388 (396)
||||.| +++||++|||++||||.|+|||||+||++.|||++|+|++++++ ++|+ ..+.|+....
T Consensus 445 rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 445 RDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp ESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTT
T ss_pred eeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhc
Confidence 999999 89999999999999999999999999999999999999987664 3564 4779976554
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=7.9e-59 Score=471.62 Aligned_cols=314 Identities=27% Similarity=0.490 Sum_probs=227.9
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 90 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~ 90 (396)
.+++||||+++++|+. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 165 ~d~~liNG~~~~~~~~------------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~ 226 (503)
T 1hfu_A 165 PDATLINGKGRYVGGP------------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGEL 226 (503)
T ss_dssp CSEEEETTBCCBTTCC------------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred CCEEEECcccccCCCC------------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcc
Confidence 5799999999998853 1223689999999999999999999999999999999999999999
Q ss_pred eeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCC------CCCCcceEEEEccCCCCCCCCCCCCCCCCCCC
Q 016030 91 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 164 (396)
Q Consensus 91 v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~------~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~ 164 (396)
++|+.+++|.|++||||||+|++++.+| +|||++....... ......++|+|.+.... .|.... .+....
T Consensus 227 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-~p~~~~--~~~~~~ 302 (503)
T 1hfu_A 227 TEPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA-DPTTSA--NPNPAQ 302 (503)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSS-CCCCCC--CSSCCB
T ss_pred ccccccCeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCC-CCCCCC--CCccCC
Confidence 9999999999999999999999988665 8999997652211 11123699999754322 121110 111111
Q ss_pred CcccccccccccccCCCCCC--CCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCC
Q 016030 165 YDHSKSFSNKIFALMGSPKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 242 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~ 242 (396)
+.. ...........+.. +...+.++.+... .++. .|+|||++|..+..|+|.+...+.... ..|
T Consensus 303 l~~---~~l~p~~~~~~p~~~~~~~~~~~~~l~~~---~~~~-~~~iNg~~~~~~~~P~l~~~~~g~~~~-------~~~ 368 (503)
T 1hfu_A 303 LNE---ADLHALIDPAAPGIPTPGAADVNLRFQLG---FSGG-RFTINGTAYESPSVPTLLQIMSGAQSA-------NDL 368 (503)
T ss_dssp CCG---GGCBBSSSCSCSSCSSTTCSSEEEECCEE---EETT-EEEETTBCCCCCSSCHHHHHHTTCCSG-------GGS
T ss_pred Ccc---ccccccCccCCCCcccCCcceEEEEEEee---ccCc-eEEECCCccCCCCCcchhhhhcCCccc-------ccC
Confidence 110 00011100111111 1123444433211 1122 799999999988889887765432110 001
Q ss_pred CCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCC
Q 016030 243 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 322 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p 322 (396)
..+..++.++.|++++|+|+|.. ..+.||||||||+|+||+++.+. .+|+.+|
T Consensus 369 ---------------~~~~~~~~v~~g~~vei~l~~n~-----~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p 421 (503)
T 1hfu_A 369 ---------------LPAGSVYELPRNQVVELVVPAGV-----LGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNP 421 (503)
T ss_dssp ---------------SSTTSEEEECSSCEEEEEEECCS-----TTCCCEEEETTCCEEEEECTTCC-------CCCCSSB
T ss_pred ---------------CCCceEEEccCCCEEEEEEECCC-----CCCCCCEEEecceEEEEecCCCC-------ccccCCC
Confidence 12346789999999999999532 14699999999999999997653 3578899
Q ss_pred CccceEEe-CCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecccccc---CCCC-ccccccccc
Q 016030 323 PLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QALACGLTG 387 (396)
Q Consensus 323 ~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~---~~P~-~~~~c~~~~ 387 (396)
+|||||.| +++||++|||++||||.|+|||||+||++.|||++|+|++++++ .+|. ..+.|+...
T Consensus 422 ~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~ 491 (503)
T 1hfu_A 422 VKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYD 491 (503)
T ss_dssp CEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhccchh
Confidence 99999999 99999999999999999999999999999999999999987654 3564 477997654
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.2e-58 Score=473.44 Aligned_cols=330 Identities=24% Similarity=0.373 Sum_probs=233.2
Q ss_pred CCCCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeC
Q 016030 8 PQGHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD 87 (396)
Q Consensus 8 ~~~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~D 87 (396)
+...+++||||++.+.|+.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+|
T Consensus 192 ~~~~d~~liNG~~~~~~~~~------------------g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~D 253 (559)
T 2q9o_A 192 PPFSDNVLINGTAVNPNTGE------------------GQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD 253 (559)
T ss_dssp CCCBSEEEETTBCBCTTTCC------------------BCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEET
T ss_pred CCccceeEECCccccCcCCC------------------CCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecC
Confidence 34468999999999887521 123689999999999999999999999999999999999999
Q ss_pred CceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe--cCCC--CCCCCcceEEEEccCCCCCCCCCCCCCCCCCC
Q 016030 88 GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV--RGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRWD 163 (396)
Q Consensus 88 G~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~--~~~~--~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~ 163 (396)
|.+++|+.+++|.|++||||||||++++.++ +||||+.. ...+ .......++|+|.++.. ..|...........
T Consensus 254 G~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~ 331 (559)
T 2q9o_A 254 MVPVNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQ 331 (559)
T ss_dssp TEEEEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCT
T ss_pred CcccCceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcc
Confidence 9999999999999999999999999988655 89999986 3221 12234689999975432 12221111000000
Q ss_pred CCcccccccccccccCCCCCCC--CccceEEEEeecccccCCeEEEEEcCccCcCC-CCCchhhhhccCCCCCCCCCCCC
Q 016030 164 DYDHSKSFSNKIFALMGSPKPP--TNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYGLKDAFDQNGPPE 240 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p-~~p~l~~~~~~~~~~~~~~~~~~ 240 (396)
... ............+.+. ...+.++.+... ....+...|+|||++|..+ ..|+|.....|..
T Consensus 332 ~~~---~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~---------- 397 (559)
T 2q9o_A 332 CLD---TLDVRPVVPRSVPVNSFVKRPDNTLPVALD-LTGTPLFVWKVNGSDINVDWGKPIIDYILTGNT---------- 397 (559)
T ss_dssp TCC---CSCCCBSSCCBCCCTTCCCCGGGEEEEEEE-CSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC----------
T ss_pred ccc---ccccccCCCCCCCCcccccceeEEEEEEee-cCCCceEEEEECCEecccCCCCCcHhHhhcCCc----------
Confidence 000 0000000000011111 111234433221 1122456799999999764 6788877654421
Q ss_pred CCCCCCCCCCCCCCCCcccccceEEee-cCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecC---------CCCC
Q 016030 241 NFSNEYDVMKPPVNANTTLGSGVYMLG-LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE---------GKFT 310 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~---------g~~~ 310 (396)
.|+. +..++.++ .+++++|+|+|.+.+ ...+.||||||||+||||+++. |.|+
T Consensus 398 ~~~~---------------~~~~~~~~~~~~v~~~vi~n~~~~--~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 398 SYPV---------------SDNIVQVDAVDQWTYWLIENDPEG--PFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp CCCG---------------GGCEEEECCSSCEEEEEEEECTTS--SCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred cCCC---------------CceEEEcCCCCEEEEEEEeCCCcc--ccCCCCcEEECCCceEEEecccccccccccccccC
Confidence 1111 23456665 467888899985410 0136899999999999999988 7776
Q ss_pred cc-cccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeeccccccCC-----CC-ccccc
Q 016030 311 KE-DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----PN-QALAC 383 (396)
Q Consensus 311 ~~-~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~-----P~-~~~~c 383 (396)
+. +...+|+.+|+|||||.|+++||++|||+|||||.|||||||+||++.|||++|+|++++++++ |. ..++|
T Consensus 461 ~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 461 PAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVC 540 (559)
T ss_dssp HHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccCCchhhhhhc
Confidence 43 3467899999999999999999999999999999999999999999999999999998777653 43 35699
Q ss_pred ccccc
Q 016030 384 GLTGK 388 (396)
Q Consensus 384 ~~~~~ 388 (396)
+...+
T Consensus 541 ~~~~~ 545 (559)
T 2q9o_A 541 DEWRA 545 (559)
T ss_dssp HHHHH
T ss_pred ccccc
Confidence 76554
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.4e-52 Score=419.31 Aligned_cols=234 Identities=26% Similarity=0.367 Sum_probs=180.6
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCcee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 127 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~ 127 (396)
+.++|++| +|||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.++++.|+|||||||+|++++ +| +|||++..
T Consensus 188 p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~ 264 (439)
T 2xu9_A 188 PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALP 264 (439)
T ss_dssp CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEEC
T ss_pred CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecc
Confidence 36899999 9999999999999999999999999999999998 899999999999999999999988 54 89999864
Q ss_pred cCCCC-----------------CCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccce
Q 016030 128 RGRKP-----------------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 190 (396)
Q Consensus 128 ~~~~~-----------------~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (396)
..... ......++|+|.+.... ...|... .. .... +.+ ..++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~p~~l--~~-----------~~~l--~~~--~~~r 323 (439)
T 2xu9_A 265 YDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP----LPLPKAL--SP-----------FPTL--PAP--VVTR 323 (439)
T ss_dssp CCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC----CCCCSCC--CC-----------CCCC--CCC--SEEE
T ss_pred cccCCccccccccccccccCCCCCcceeEEEEecCCCcc----ccCcccC--CC-----------cccC--CCC--Ccce
Confidence 32110 11245678888643211 0011000 00 0000 111 1235
Q ss_pred EEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCC
Q 016030 191 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 270 (396)
Q Consensus 191 ~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 270 (396)
++.+.... .+ ..|.|||.+|..+.. .+.++.|+
T Consensus 324 ~~~l~~~~---~g-~~~~iNg~~~~~~~~-------------------------------------------~~~~~~g~ 356 (439)
T 2xu9_A 324 RLVLTEDM---MA-ARFFINGQVFDHRRV-------------------------------------------DLKGQAQT 356 (439)
T ss_dssp EEEEEEEG---GG-TEEEETTBCCCTTCC-------------------------------------------CEEECTTC
T ss_pred EEEEEeec---cC-ceEeECCEECCCCCC-------------------------------------------ceecCCCC
Confidence 66554322 11 369999999864311 15678999
Q ss_pred EEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEE
Q 016030 271 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 350 (396)
Q Consensus 271 ~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~ 350 (396)
+++|+|+|.+ .+.||||||||+||||+++.+.+ .+|.|||||.|++++|++|||++||||.|+|
T Consensus 357 ~~~~~~~N~~------~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~ 420 (439)
T 2xu9_A 357 VEVWEVENQG------DMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVF 420 (439)
T ss_dssp EEEEEEEECS------SSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEE
T ss_pred EEEEEEEcCC------CCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEE
Confidence 9999999975 46999999999999999976544 4689999999999999999999999999999
Q ss_pred eecchhhhhcCcEEEEeec
Q 016030 351 HCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 351 HCHi~~H~~~GM~~~~~~~ 369 (396)
||||+||++.|||++|.++
T Consensus 421 HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 421 HCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EESSHHHHHTTCEEEEEEC
T ss_pred ECCcchhhhcCCcEEEEeC
Confidence 9999999999999999875
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.7e-51 Score=416.76 Aligned_cols=262 Identities=20% Similarity=0.232 Sum_probs=190.6
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeC-------ceeEE
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-------HKMVV 83 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~-------h~l~V 83 (396)
.+++||||+... .++|++ ++|||||||||+.+.+.|+|++ |+|+|
T Consensus 201 gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~v 252 (534)
T 3abg_A 201 GDVIHVNGQPWP---------------------------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKV 252 (534)
T ss_dssp CSEEEETTEESC---------------------------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEE
T ss_pred CceeccCCccCc---------------------------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEE
Confidence 478999998653 467888 5899999999999999999987 99999
Q ss_pred EEeCCce-eeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecC--CC---CCCCCcceEEEEccCCCCCCCCCCCC
Q 016030 84 VEADGNY-VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG--RK---PATPPALTLLNYHPTSASKIPLSPPP 157 (396)
Q Consensus 84 Ia~DG~~-v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~--~~---~~~~~~~~il~y~~~~~~~~p~~~~~ 157 (396)
||+||++ ++|+.+++|.|++||||||||++++.+|.+|||++.... +. .......++++|........+ ...
T Consensus 253 Ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~--~~~ 330 (534)
T 3abg_A 253 IASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP--DTS 330 (534)
T ss_dssp EEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS--CCC
T ss_pred EEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC--CCC
Confidence 9999996 599999999999999999999999877768999974311 11 111235689999654321000 000
Q ss_pred CCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCC
Q 016030 158 ITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNG 237 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~ 237 (396)
..+. . +. ....+.+....++++.+.. ....|+|||.+|..+..|++
T Consensus 331 ~~P~--~----------L~-~~~~p~~~~~~~~~~~~~~------~~~~w~iNG~~f~~~~~p~l--------------- 376 (534)
T 3abg_A 331 VVPA--N----------LR-DVPFPSPTTNTPRQFRFGR------TGPTWTINGVAFADVQNRLL--------------- 376 (534)
T ss_dssp CCCC--C----------CC-CCSCCCCCCCCCEEEECSC------CCSTTCCCCBTTBCTTSCCC---------------
T ss_pred CCcc--c----------cc-cCCCCCCccccceEEEEec------cCceeEECCcccCCCCCcce---------------
Confidence 0000 0 00 0001112223345554321 11258999999865432321
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccc
Q 016030 238 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKF 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~ 317 (396)
+.++.|++++|+|+|.+. .+.||||||||+||||+++.|.+. ....
T Consensus 377 --------------------------~~v~~G~~~~w~i~N~~~-----~~~HP~HLHG~~F~Vl~~~~g~~~---~~~~ 422 (534)
T 3abg_A 377 --------------------------ANVPVGTVERWELINAGN-----GWTHPIHIHLVDFKVISRTSGNNA---RTVM 422 (534)
T ss_dssp --------------------------CEECTTCEEEEEEEECSS-----SCCCCEEESSCCEEEEEESSCCSS---SCCC
T ss_pred --------------------------eeccCCCEEEEEEEcCCC-----CCCcCEEECCeeEEEEEEcCCCCc---CcCC
Confidence 356789999999999751 358999999999999999766432 1124
Q ss_pred CCCCCCccceEEeCCCcEEEEEEE-cCCCeeeEEeecchhhhhcCcEEEEeeccc
Q 016030 318 NLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 318 n~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 371 (396)
++++ .|||||.|+|+++++|||+ +||||.|+|||||+||++.|||++|.+...
T Consensus 423 ~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 476 (534)
T 3abg_A 423 PYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVL 476 (534)
T ss_dssp SGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSS
T ss_pred cccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEec
Confidence 5566 8999999999999999999 999999999999999999999999987643
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=5.5e-50 Score=401.27 Aligned_cols=249 Identities=15% Similarity=0.115 Sum_probs=185.6
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEE-eCceeEEEEeCC
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADG 88 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sI-d~h~l~VIa~DG 88 (396)
..+++||||++. +.++|++| +|||||||+|+.+.+.|+| |||+|+|||+||
T Consensus 181 ~~d~~liNG~~~---------------------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG 232 (451)
T 2uxt_A 181 VGDTLLVNGVQS---------------------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQ 232 (451)
T ss_dssp CCSEEEETTEES---------------------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSS
T ss_pred cCCEEEECCccc---------------------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCC
Confidence 357999999976 36899999 9999999999999999999 899999999999
Q ss_pred cee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCC----------CCCCCcceEEEEccCCCCCCCCCCCC
Q 016030 89 NYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK----------PATPPALTLLNYHPTSASKIPLSPPP 157 (396)
Q Consensus 89 ~~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~----------~~~~~~~~il~y~~~~~~~~p~~~~~ 157 (396)
+++ +|+.++++.|+|||||||+|++++ + ++|||++...... .......++++|........+....|
T Consensus 233 ~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p 310 (451)
T 2uxt_A 233 GFLPAPVSVKQLSLAPGERREILVDMSN-G-DEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLP 310 (451)
T ss_dssp SEEEEEEEESSEEECTTCEEEEEEECTT-C-CCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCC
T ss_pred CccCCceEeceEEECceeEEEEEEEeCC-C-CEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCc
Confidence 998 899999999999999999999986 3 4899987543211 11123468899975432211111011
Q ss_pred CCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCC
Q 016030 158 ITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNG 237 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~ 237 (396)
. .+ . ....+..+...++++.+. + .|+|||.+|..+..
T Consensus 311 ---~--~L----------~-~~~~~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~~------------------ 347 (451)
T 2uxt_A 311 ---M--RL----------L-PTEIMAGSPIRSRDISLG-------D--DPGINGQLWDVNRI------------------ 347 (451)
T ss_dssp ---S--CS----------S-SSCCCCCCCSEEEEEEEC-------S--SSSBTTBCCCTTCC------------------
T ss_pred ---c--cc----------C-CCCCCCCCCcceEEEEEe-------e--EEEECCEeCCCCCC------------------
Confidence 0 00 0 000011112233444432 1 58999998864311
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccc
Q 016030 238 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKF 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~ 317 (396)
.+.++.|++++|+|+|. +.||||||||+||||++++.. +
T Consensus 348 -------------------------~~~~~~G~~~~~~l~N~--------~~HP~HLHGh~F~Vl~~~G~~--------~ 386 (451)
T 2uxt_A 348 -------------------------DVTAQQGTWERWTVRAD--------EPQAFHIEGVMFQIRNVNGAM--------P 386 (451)
T ss_dssp -------------------------CEEEETTCEEEEEEEEE--------EEEEEEETTCEEEEEEETTBC--------C
T ss_pred -------------------------cEEcCCCCEEEEEEECC--------CCcCeEECCceEEEEeeCCcC--------C
Confidence 25778999999999995 389999999999999996332 3
Q ss_pred CCCCCCccceEEeCCCcEEEEEEEcCCCee----eEEeecchhhhhcCcEEEEeecccccc
Q 016030 318 NLKNPPLKNTAVIFPYGWTALRFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETVG 374 (396)
Q Consensus 318 n~~~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCHi~~H~~~GM~~~~~~~~~~~~ 374 (396)
++.+|.|||||.| ++++.|+|++||||. |||||||++|++.|||++|.+...++.
T Consensus 387 ~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 387 FPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp CGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred CcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 5567999999999 899999999999988 999999999999999999998765543
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.7e-49 Score=404.00 Aligned_cols=266 Identities=18% Similarity=0.236 Sum_probs=188.1
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCc-eeEEEEeCC
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADG 88 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h-~l~VIa~DG 88 (396)
..+++||||+++. .++|++| +|||||||||+.+.+.|+|++| +|+|||+||
T Consensus 229 ~~d~~liNG~~~p---------------------------~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG 280 (513)
T 2wsd_A 229 CGETILVNGKVWP---------------------------YLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDG 280 (513)
T ss_dssp CCSEEEETTEESC---------------------------EEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETT
T ss_pred ccceEEECCcccc---------------------------eEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCC
Confidence 3589999999873 5788885 8999999999999999999999 999999999
Q ss_pred cee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEec-CCCCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCc
Q 016030 89 NYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR-GRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYD 166 (396)
Q Consensus 89 ~~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~-~~~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~ 166 (396)
+++ +|+.+++|.|++||||||||++++.+|..++++.... +.........++++|........+.. ...+. .+.
T Consensus 281 ~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~--~~~p~--~l~ 356 (513)
T 2wsd_A 281 GLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDE--SRKPK--YLA 356 (513)
T ss_dssp EEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCC--CCCCS--BCS
T ss_pred CcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCcc--CCCCc--ccc
Confidence 998 8999999999999999999999986653344443221 11111123468999975431111110 00110 000
Q ss_pred ccccccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCC
Q 016030 167 HSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEY 246 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
. .... +......++++.+..... ..+...|.|||.+|..+.
T Consensus 357 ~--------~~~~--~~~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~~~---------------------------- 397 (513)
T 2wsd_A 357 S--------YPSV--QHERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHDPV---------------------------- 397 (513)
T ss_dssp C--------CGGG--CCCCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTSCC----------------------------
T ss_pred C--------CCCc--ccCCCcceEEEEEEeecC-CCCCceEeECCccCCCcc----------------------------
Confidence 0 0000 111122345555433221 224457899999875321
Q ss_pred CCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCC---CCCcccccccCCCC--
Q 016030 247 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTKEDEKKFNLKN-- 321 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g---~~~~~~~~~~n~~~-- 321 (396)
.+.++.|++++|+|+|.+ .+.||||||||+||||+++.+ .|+. ...+|+.+
T Consensus 398 ----------------~~~~~~g~~~~w~l~N~~------~~~HP~HlHG~~F~Vl~~~~~~~~~~~~--~~~~~~~~~~ 453 (513)
T 2wsd_A 398 ----------------TETPKVGTTEIWSIINPT------RGTHPIHLHLVSFRVLDRRPFDIARYQE--SGELSYTGPA 453 (513)
T ss_dssp ----------------CBCCBTTCEEEEEEEECS------SSCEEEEESSCCEEEEEEEEBCHHHHHH--HCCCCBSSCC
T ss_pred ----------------cEecCCCCEEEEEEEcCC------CCCcCEeEeCceEEEEEecCcccccccc--cccccccCCC
Confidence 124578999999999975 469999999999999999753 2211 11233443
Q ss_pred -------CCccceEEeCCCcEEEEEEEc-CCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 322 -------PPLKNTAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 322 -------p~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+.|||||.|++++++.|+|++ ||||.|+|||||+||++.|||.+|.+.+
T Consensus 454 ~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 454 VPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp BCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 359999999999999999987 8999999999999999999999998865
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=9.4e-49 Score=391.82 Aligned_cols=249 Identities=20% Similarity=0.289 Sum_probs=183.1
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEE--eC---ceeEEEE
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV--KN---HKMVVVE 85 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sI--d~---h~l~VIa 85 (396)
.+++||||+.. +.++|++| +|||||||+|+.+.+.|+| ++ |+|+|||
T Consensus 169 ~~~~liNG~~~---------------------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via 220 (448)
T 3aw5_A 169 GNAVLVNGVKD---------------------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA 220 (448)
T ss_dssp CSEEEETTEET---------------------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE
T ss_pred ccEEEECCccc---------------------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE
Confidence 47899999875 36899999 9999999999999999999 99 9999999
Q ss_pred eCCceee-eeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCC-------------CCCCCcceEEEEccCCCCCC
Q 016030 86 ADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK-------------PATPPALTLLNYHPTSASKI 151 (396)
Q Consensus 86 ~DG~~v~-P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~-------------~~~~~~~~il~y~~~~~~~~ 151 (396)
+||++++ |+.+++|.|++||||||+|++++ +.|||++.....+ .......++|+|.+....
T Consensus 221 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (448)
T 3aw5_A 221 VDQGFLARPIEVRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA-- 295 (448)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC--
T ss_pred eCCCccCCceEeceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC--
Confidence 9999997 99999999999999999999983 3899998654321 011234567788543211
Q ss_pred CCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCC
Q 016030 152 PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKD 231 (396)
Q Consensus 152 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~ 231 (396)
+. |. ...++ ..+..+...++++.+... ...|+|||++|..++ |
T Consensus 296 ~~---p~--~L~~l--------------p~~~~~~~~~~~~~l~~~------~~~~~iNg~~~~~~~-p----------- 338 (448)
T 3aw5_A 296 VP---VE--ALSDP--------------PPEPPKPTRTRRFALSLS------GMQWTINGMFWNASN-P----------- 338 (448)
T ss_dssp CC---CC--CCSCC--------------CCCCCCCSEEEEEEEEEE------TTEEEETTBCCCTTC-T-----------
T ss_pred CC---cc--ccCCC--------------CCCCCCCCceEEEEEeCC------CceeeECCCcCCCCC-C-----------
Confidence 11 10 00000 001112233556655321 125999999986421 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcccccceEE-eecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCC
Q 016030 232 AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM-LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 310 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~ 310 (396)
.+. ++.|++|+|+|+|.+. .+.||||||||+||||+++ |.+.
T Consensus 339 -------------------------------~~~~~~~g~~v~~~i~N~~~-----~~~HP~HLHG~~F~Vl~~~-G~~~ 381 (448)
T 3aw5_A 339 -------------------------------LFEHVSVEGVELWEIVNDKA-----SMPHPMHLHGFPMWIIERK-DSPR 381 (448)
T ss_dssp -------------------------------TCCCEEECEEEEEEEEECSS-----SCCEEEEESSSCBEEEEEE-SCCH
T ss_pred -------------------------------ceeccCCCCeEEEEEEcCCC-----CCCcCEEECCceEEEEEec-CCCc
Confidence 123 6789999999999751 3589999999999999995 4442
Q ss_pred c-cccccc----CCCCCCccceEEeCCCcEEEEE--EE---cCCCeeeEEeecchhhhhcCcEEEEee
Q 016030 311 K-EDEKKF----NLKNPPLKNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 311 ~-~~~~~~----n~~~p~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
. .+...+ +..++.|||||.|+|+++++|+ |+ +||| |+|||||+||++.|||++|.+
T Consensus 382 ~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 382 QVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp HHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred ccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 1 111222 2335579999999999999655 99 9999 999999999999999999976
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.2e-48 Score=405.16 Aligned_cols=289 Identities=17% Similarity=0.176 Sum_probs=170.0
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCce-------eEEEEeCCcee-eeeEec------eEEecCCceEEEEEeeC
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHK-------MVVVEADGNYV-QPFEVD------DMDIYSGESYSVLLTTN 114 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~-------l~VIa~DG~~v-~P~~v~------~l~i~~GqRyDVlv~~~ 114 (396)
+.+.|++ ++|||||||||+.+.|+|+|++|+ |+|||+||+++ +|+.++ +|.|++||||||||+++
T Consensus 265 p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~ 343 (612)
T 3gyr_A 265 PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFR 343 (612)
T ss_dssp CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECT
T ss_pred ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECC
Confidence 3567765 579999999999999999999994 99999999999 587765 79999999999999999
Q ss_pred CCCCcceEEEEEecCCCCC------CCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCcc
Q 016030 115 QDPSYNYWISAGVRGRKPA------TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNF 188 (396)
Q Consensus 115 ~~~~~~y~ir~~~~~~~~~------~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (396)
+.++..|+++......... ......+++|.............+............ .....
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--------------~~~~~ 409 (612)
T 3gyr_A 344 ALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSH--------------DIPHG 409 (612)
T ss_dssp TCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCT--------------TSCCE
T ss_pred CCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccccccc--------------ccccc
Confidence 9876455555433221111 122346667654332221111111111100000000 00000
Q ss_pred ceEEEEeecccc--cCCeEEEEEcCccCcC-CCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEE
Q 016030 189 HRRLTLLNTQNT--INGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 265 (396)
Q Consensus 189 ~~~i~~~~~~~~--~~g~~~~~iN~~s~~~-p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (396)
.+...+...... ......|.+....... ...+........ ........+. .+.........+.
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---------~n~~~~~~~~~~~ 475 (612)
T 3gyr_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVT-----GADGRTKTYR---------RTARTFNDGLGFT 475 (612)
T ss_dssp EEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEE-----CTTSCEEEEE---------EEECSTTSCCCEE
T ss_pred cccccccccccccccccccccccccccccccccccccceeeec-----cCCCcccccc---------ccCccCCCCcceE
Confidence 000000000000 0000111111100000 000000000000 0000000000 0000011123478
Q ss_pred eecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----------------cccccCCCCCCccceEE
Q 016030 266 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAV 329 (396)
Q Consensus 266 ~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~ 329 (396)
++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+... .....+..++.|||||.
T Consensus 476 ~~~g~~~~w~i~N~~------~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~ 549 (612)
T 3gyr_A 476 IGEGTHEQWTFLNLS------PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQ 549 (612)
T ss_dssp EETTCEEEEEEEECS------SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEE
T ss_pred eCCCCEEEEEEEcCC------CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEE
Confidence 899999999999976 46999999999999999865443221 11235667889999999
Q ss_pred eCCCcEEEEEEE-cCCCeeeEEeecchhhhhcCcEEEEeecccc
Q 016030 330 IFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGVET 372 (396)
Q Consensus 330 vp~~g~~~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~ 372 (396)
|++++|++|||+ +||||.|||||||++|++.|||.+|.|.+.+
T Consensus 550 v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 550 VPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred ECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 999999999999 8999999999999999999999999886543
No 15
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=7.3e-48 Score=395.85 Aligned_cols=292 Identities=16% Similarity=0.182 Sum_probs=193.6
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCc-------eeE
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-------KMV 82 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h-------~l~ 82 (396)
-.+++||||+.+ +.++|++| +|||||||+|+.+.|.|+|++| +|+
T Consensus 253 ~gd~~lVNG~~~---------------------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~ 304 (612)
T 2g23_A 253 FGPYTTVNGRIW---------------------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH 304 (612)
T ss_dssp CCSEEEETTEES---------------------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE
T ss_pred cCCEEEECCccC---------------------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE
Confidence 468999999976 36899999 9999999999999999999999 899
Q ss_pred EEEeCCcee-eeeEec------eEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCC------CcceEEEEccCCCC
Q 016030 83 VVEADGNYV-QPFEVD------DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATP------PALTLLNYHPTSAS 149 (396)
Q Consensus 83 VIa~DG~~v-~P~~v~------~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~------~~~~il~y~~~~~~ 149 (396)
|||+||+++ +|+.++ +|.|++||||||||++++.+|++|+|+.......+... ....++++......
T Consensus 305 vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~ 384 (612)
T 2g23_A 305 QIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETC 384 (612)
T ss_dssp EEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCS
T ss_pred EEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCC
Confidence 999999999 699999 99999999999999999987778999876432111110 11245555443221
Q ss_pred CCCCCCCCCCCC--CCCCcccccccccccccCCCCCC--CCccceEEEEeecc---------------cccCC-eEEEEE
Q 016030 150 KIPLSPPPITPR--WDDYDHSKSFSNKIFALMGSPKP--PTNFHRRLTLLNTQ---------------NTING-FTKWAI 209 (396)
Q Consensus 150 ~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~---------------~~~~g-~~~~~i 209 (396)
.......|.... ...+........+..... .+.. .........+.... ...+| ...|.|
T Consensus 385 ~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 463 (612)
T 2g23_A 385 EEDSFALPEVLSGSFRRMSHDIPHGHRLIVLT-PPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRR 463 (612)
T ss_dssp CCCCCCCCSSCCSSCCCCCTTSCCEEEEEEEC-CTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEE
T ss_pred CCCCCCCChhhccccccCCcccccceeEEeec-cccccccccccceeeccccccccccccccccceeeeccCCceeEEEE
Confidence 111111111110 000000000000000000 0000 00000001000000 00012 234667
Q ss_pred cCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCCCCC
Q 016030 210 NNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEI 289 (396)
Q Consensus 210 N~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~~~~ 289 (396)
||..|... ..+.++.|++|+|+|.|.+ .+.
T Consensus 464 NG~~~~~~--------------------------------------------~~~~v~~G~~v~w~l~N~~------~~~ 493 (612)
T 2g23_A 464 TAATFNDG--------------------------------------------LGFTIGEGTHEQWTFLNLS------PIL 493 (612)
T ss_dssp EECSTTSC--------------------------------------------CCEEEETTCEEEEEEEECS------SSC
T ss_pred CCccCCCC--------------------------------------------CceEecCCCEEEEEEEeCC------CCC
Confidence 77665411 1367899999999999976 469
Q ss_pred CCeeecCCceEEEeecCCCCCcc----------------cccccCCCCCCccceEEeCCCcEEEEEEEcC-CCeeeEEee
Q 016030 290 HPWHLHGHDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAVIFPYGWTALRFVAD-NPGAWAFHC 352 (396)
Q Consensus 290 HP~HLHG~~F~Vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad-npG~w~~HC 352 (396)
|||||||+.|+|++++.+.++.. .....+..++.|||||.|+|+++++|+|+++ |||.|||||
T Consensus 494 HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HC 573 (612)
T 2g23_A 494 HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHC 573 (612)
T ss_dssp EEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEE
T ss_pred CCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEe
Confidence 99999999999999864322110 0123455677899999999999999999999 999999999
Q ss_pred cchhhhhcCcEEEEeeccccccCCCCcc
Q 016030 353 HIEPHFHIGMGVVLALGVETVGNIPNQA 380 (396)
Q Consensus 353 Hi~~H~~~GM~~~~~~~~~~~~~~P~~~ 380 (396)
||++|++.|||..|.|.++++.++|...
T Consensus 574 Hil~Hed~GMm~~f~V~p~~~~~~~~~~ 601 (612)
T 2g23_A 574 HLLEHEDMGMMRPFVVMPPEALKFDHGG 601 (612)
T ss_dssp SSHHHHTTTCEEEEEEECHHHHTTC---
T ss_pred CchhHhhcCCceEEEECchhhccCCCCC
Confidence 9999999999999999998888887543
No 16
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.1e-45 Score=370.90 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=171.6
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCcee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 127 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~ 127 (396)
+.++|++|+ ||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.+++|.|+|||||||||++++ ++.|.|++..
T Consensus 222 p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~ 297 (481)
T 3zx1_A 222 PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAY 297 (481)
T ss_dssp CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECC
T ss_pred ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEec
Confidence 368999999 99999999999999999999999999998876 899999999999999999999986 3478887643
Q ss_pred cCCC----CCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecccccC-
Q 016030 128 RGRK----PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN- 202 (396)
Q Consensus 128 ~~~~----~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 202 (396)
.... ........++++..... . ...|... . ... +.+....++++.+......+.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~---~-~~lP~~l--~--------------~~~-~~~~~~~~r~~~l~~~~~~~~~ 356 (481)
T 3zx1_A 298 YDRDKMMVKEEPNTLFLANINLKKE---N-VELPKNL--K--------------IFK-PSEEPKEFKEIIMSEDHMQMHG 356 (481)
T ss_dssp CCCCCSSCCCCCCCEEEEEEEEECC---C-CCCCSCS--C--------------CCC-CCCCCCEEEEEEEEECCSTTTT
T ss_pred ccccCccccCCCCceeEEEEecCCC---C-ccCCccc--c--------------CCC-CCCCCCcEEEEEEeccchhccc
Confidence 3221 01122344444432211 0 0111100 0 000 011112345555432111000
Q ss_pred ----Ce--------EEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCC
Q 016030 203 ----GF--------TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 270 (396)
Q Consensus 203 ----g~--------~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 270 (396)
+. ..|+|||..|.... ..+.++.|+
T Consensus 357 ~~~~~~~~~~~~~~~~~~iNG~~~~~~~-------------------------------------------~~~~~~~G~ 393 (481)
T 3zx1_A 357 MMGKSEGELKIALASMFLINRKSYDLKR-------------------------------------------IDLSSKLGV 393 (481)
T ss_dssp GGGCCHHHHHHHHHTTEEETTBCCCTTC-------------------------------------------CCEEEETTC
T ss_pred ccccccccccccccceeEECCEeCCCCC-------------------------------------------ceEEeCCCC
Confidence 00 13999998874211 126789999
Q ss_pred EEEEEEecCCCCCCCCCCCCCeeecCCceEEEee--cCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeee
Q 016030 271 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR--GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 348 (396)
Q Consensus 271 ~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~--g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w 348 (396)
+|+|+|.|.+ .+.|||||||+.|+|+++ +.... ...++.|||||.|+|+++++|+|++||||.|
T Consensus 394 ~v~w~l~N~~------~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w 459 (481)
T 3zx1_A 394 VEDWIVINKS------HMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDTINVRPNEELRLRMKQDFKGLR 459 (481)
T ss_dssp CEEEEEEECS------SSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEEEEEcCC------CCceeEEEeccEEEEEEecccCCCC--------CcccCcccceEEECCCCEEEEEEEcCCCeeE
Confidence 9999999965 569999999999999998 32221 1235789999999999999999999999999
Q ss_pred EEeecchhhhhcCcEEEEeec
Q 016030 349 AFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 349 ~~HCHi~~H~~~GM~~~~~~~ 369 (396)
+|||||++|++.|||.+|.|.
T Consensus 460 ~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 460 MYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEESSHHHHHTTCEEEEEEE
T ss_pred EEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999874
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.3e-44 Score=361.18 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=172.9
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEE-eCceeEEEEeCCc
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGN 89 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sI-d~h~l~VIa~DG~ 89 (396)
.+++||||+.++ .+.+ +|++|||||||+|+.+.|.|+| |+|+|+|||+||+
T Consensus 183 gd~~lvNG~~~p---------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~ 234 (488)
T 3od3_A 183 GDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGG 234 (488)
T ss_dssp CSEEEETTBSSC---------------------------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTE
T ss_pred CCEEEEcCCcCc---------------------------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCC
Confidence 478899998753 3444 6789999999999999999999 6999999999999
Q ss_pred ee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCC----CCCCcceEEEEccCCCCCCCCCCCCCCCCCCC
Q 016030 90 YV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 164 (396)
Q Consensus 90 ~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~----~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~ 164 (396)
++ +|+.+++|.|++||||||||++++ ++.|+|++....... .......+++....... .....|... ..
T Consensus 235 ~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~P~~L--~~ 308 (488)
T 3od3_A 235 LLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS--ASGALPDTL--SS 308 (488)
T ss_dssp EEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--CCCCCCSCC--CC
T ss_pred cccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--CCCCCCccc--cc
Confidence 87 899999999999999999999986 348999875432111 01112223333221100 000001000 00
Q ss_pred CcccccccccccccCCCCCCCCccceEEEEeecc-------------------ccc----------CC----------e-
Q 016030 165 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ-------------------NTI----------NG----------F- 204 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------------~~~----------~g----------~- 204 (396)
+ ...+......++++.+.... ..+ .| +
T Consensus 309 ~-------------~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 375 (488)
T 3od3_A 309 L-------------PALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFD 375 (488)
T ss_dssp C-------------CCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGC
T ss_pred C-------------CCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccccccc
Confidence 0 00011111223444442100 000 01 0
Q ss_pred --EEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCC
Q 016030 205 --TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 282 (396)
Q Consensus 205 --~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~ 282 (396)
..|.|||+.|.... ..+.++.|++++|.|.|.+.
T Consensus 376 ~~~~~~ING~~~~~~~-------------------------------------------~~~~~~~G~~e~w~l~N~~~- 411 (488)
T 3od3_A 376 FHHANKINGQAFDMNK-------------------------------------------PMFAAAKGQYERWVISGVGD- 411 (488)
T ss_dssp GGGCEEETTBCCCTTC-------------------------------------------CSEECCBSSCEEEEEECTTC-
T ss_pred ccceeeECCeeCCCCC-------------------------------------------CceEcCCCCEEEEEEEeCCC-
Confidence 13799998875321 12577899999999999751
Q ss_pred CCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc----CCCeeeEEeecchhhh
Q 016030 283 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA----DNPGAWAFHCHIEPHF 358 (396)
Q Consensus 283 ~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a----dnpG~w~~HCHi~~H~ 358 (396)
.+.|||||||+.|+|++++.....+ .++.|||||.|+ ++++.|+|++ ++||.||||||+++|+
T Consensus 412 ----~~~Hp~HlHg~~F~Vl~~~g~~~~~--------~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 412 ----MMLHPFHIHGTQFRILSENGKPPAA--------HRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp ----CCCEEEEETTCCBEEEEBTTBCCCG--------GGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHH
T ss_pred ----CCCccEEEcCceEEEeccCCCcccc--------ccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHH
Confidence 3589999999999999996543321 235799999999 9999999996 4578999999999999
Q ss_pred hcCcEEEEee
Q 016030 359 HIGMGVVLAL 368 (396)
Q Consensus 359 ~~GM~~~~~~ 368 (396)
+.|||.+|.|
T Consensus 479 d~GMm~~f~V 488 (488)
T 3od3_A 479 DTGMMLGFTV 488 (488)
T ss_dssp HTTCEEEEEC
T ss_pred hcCCcEEEEC
Confidence 9999999975
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.97 E-value=6.1e-30 Score=256.48 Aligned_cols=236 Identities=17% Similarity=0.118 Sum_probs=150.8
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEec
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 128 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~ 128 (396)
++++|++|++|||||+|++.. .+.++|+.|.+ ++.||.+ +.+.|.|||||++++++++. ++||++....
T Consensus 195 p~i~v~~G~~v~~rl~N~~~~-~~~~~ih~Hg~--~~~DG~~------~~~~i~pG~~~~~~~~~~~~--G~~~yh~h~~ 263 (447)
T 2dv6_A 195 PFLRVRVGDTVELHLKNHKDS-LMVHSVDFHGA--TGPGGAA------AFTQTDPGEETVVTFKALIP--GIYVYHCATP 263 (447)
T ss_dssp CCEEEETTCEEEEEEEECTTC-SSCBCCEETTC--CSGGGGG------GGCCBCTTCEEEEEEECCSC--EEEEEECCSS
T ss_pred CeEEecCCCEEEEEEEeCCCC-ceeEEEeeccc--cCCCCCC------ccEEeCCCCEEEEEEECCCC--eEEEEEeCCC
Confidence 679999999999999999852 22344555544 3689984 33459999999999999874 4999987532
Q ss_pred CCCCC-CCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc-CCeEE
Q 016030 129 GRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-NGFTK 206 (396)
Q Consensus 129 ~~~~~-~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~g~~~ 206 (396)
....+ ...-.+.|.|.... .. | ..++ ++......... .... .......+ ...... .....
T Consensus 264 ~~~~~~~~Gl~g~l~v~~~~--~~-----P---~~d~-----~~~~~~~~~~~-~~~~-~~~g~~~~-~~~~~~~~~~~~ 325 (447)
T 2dv6_A 264 SVPTHITNGMYGLLLVEPEG--GL-----P---QVDR-----EFYVMQGEIYT-VKSF-GTSGEQEM-DYEKLINEKPEY 325 (447)
T ss_dssp SHHHHHHTTCEEEEEEECTT--CS-----C---CCSE-----EEEEEEEEECB-SSCT-TCCEECCB-BHHHHHTTCCSE
T ss_pred ChHHHHhCCCEEEEEEeCCC--CC-----C---CCCe-----eEEEEeccccc-CCcc-cccccccC-ChHHhhccCCCE
Confidence 10001 01124667775321 11 1 1110 00000000000 0000 00000000 000000 11245
Q ss_pred EEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCCC
Q 016030 207 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 286 (396)
Q Consensus 207 ~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~~ 286 (396)
|.|||..+.... ...+.++.|++++|+|.|.+.
T Consensus 326 ~~iNG~~~~~~~------------------------------------------~~~~~v~~g~~vrlrliN~~~----- 358 (447)
T 2dv6_A 326 FLFNGSVGSLTR------------------------------------------SHPLYASVGETVRIFFGVGGP----- 358 (447)
T ss_dssp EEETTSTTCCCC------------------------------------------CCCEEECTTCEEEEEEEEEES-----
T ss_pred EEECCcccCCCC------------------------------------------CcceEECCCCEEEEEEEeCCC-----
Confidence 788887753110 124788999999999999752
Q ss_pred CCCCCeeecCCceEEEeecCCCCCcccccccCCCCCC-ccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEE
Q 016030 287 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 365 (396)
Q Consensus 287 ~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~ 365 (396)
...||||||||+|+||+.+.+.. ..|. +|||+.|++++++.|+|+++|||.|+||||+++|++.||+++
T Consensus 359 ~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~ 428 (447)
T 2dv6_A 359 NFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGF 428 (447)
T ss_dssp SCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEE
T ss_pred CceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEE
Confidence 35899999999999999854322 2344 799999999999999999999999999999999999999998
Q ss_pred Eeecc
Q 016030 366 LALGV 370 (396)
Q Consensus 366 ~~~~~ 370 (396)
|.+..
T Consensus 429 ~~v~~ 433 (447)
T 2dv6_A 429 LNVDG 433 (447)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 87754
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=4.9e-28 Score=233.75 Aligned_cols=231 Identities=22% Similarity=0.278 Sum_probs=149.8
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe---CCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEE
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 125 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~---DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~ 125 (396)
++|++++|+++|+||+|.... ..+|.-|-+++++. ||.+. ++...|.|||||++.+++++ + |+||...
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~-~-Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR-I-GTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS-C-EEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC-C-EEEEEEe
Confidence 689999999999999999864 46788888888886 99873 34567999999999999975 4 4999986
Q ss_pred EecCCCCCCC-Cc-ceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecccccCC
Q 016030 126 GVRGRKPATP-PA-LTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 203 (396)
Q Consensus 126 ~~~~~~~~~~-~~-~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g 203 (396)
...... +.. .+ .+.+...... +.. .+ ... +......+..........+. ... .....
T Consensus 106 H~~~~~-q~~~~Gl~G~liV~p~~----~~~-~~--~~~-d~e~~l~l~d~~~~~~~~~~-~~g-----------~~~~~ 164 (339)
T 2zwn_A 106 HVNVNE-HVGVRGMWGPLIVDPKQ----PLP-IE--KRV-TKDVIMMMSTWESAVADKYG-EGG-----------TPMNV 164 (339)
T ss_dssp CSSHHH-HTTTSCCEEEEEEECSS----CCT-TG--GGC-SEEEEEEEEEECGGGTTCTT-CCC-----------STTSC
T ss_pred cCCchh-hhhcCCceEeEEecCCC----ccc-cc--ccC-CceEEEEeeheecccccccC-CCC-----------CCccc
Confidence 533200 111 11 1222222211 000 00 000 00000000000000000000 000 00001
Q ss_pred eEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCC
Q 016030 204 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 283 (396)
Q Consensus 204 ~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~ 283 (396)
...|.|||..+.. ...+.++.|++++|+|.|.+
T Consensus 165 ~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~vrlrliN~~--- 197 (339)
T 2zwn_A 165 ADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDVVKIRFFGAG--- 197 (339)
T ss_dssp CCEEEETTBCTTS--------------------------------------------SCCEEECTTCEEEEEEEECS---
T ss_pred cceEEEccccCCC--------------------------------------------cccEEECCCCEEEEEEEeCC---
Confidence 2346777765421 12367889999999999976
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhh------
Q 016030 284 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH------ 357 (396)
Q Consensus 284 ~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H------ 357 (396)
...||||||||.|+|++.+.+.. .+|.++||+.|+||+++.|+|++|+||.|+||||+++|
T Consensus 198 ---~~~h~~hlhGh~f~vi~~DG~~~----------~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~ 264 (339)
T 2zwn_A 198 ---GGIHAMHSHGHDMLVTHKDGLPL----------DSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGK 264 (339)
T ss_dssp ---SSCEEEEETTCCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTB
T ss_pred ---CceEEEEECCcEEEEEEeCCeec----------CCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccc
Confidence 35899999999999999843322 23678999999999999999999999999999999999
Q ss_pred hhcCcEEEEeec
Q 016030 358 FHIGMGVVLALG 369 (396)
Q Consensus 358 ~~~GM~~~~~~~ 369 (396)
+..||+.++.+.
T Consensus 265 ~~~gm~a~l~~~ 276 (339)
T 2zwn_A 265 HPGGPITVIEYD 276 (339)
T ss_dssp SSCSSEEEEEET
T ss_pred cCCCcEEEEEEC
Confidence 778998888654
No 20
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=2.6e-28 Score=235.64 Aligned_cols=227 Identities=17% Similarity=0.268 Sum_probs=151.6
Q ss_pred CCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCC------
Q 016030 44 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP------ 117 (396)
Q Consensus 44 ~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~------ 117 (396)
.+...++|++++|+++|+||+|.... .+.|...|..+. ++.||.++ +...|.|||+|+..+++++.+
T Consensus 72 g~~pGP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~ 144 (343)
T 3cg8_A 72 ASVPGPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGT 144 (343)
T ss_dssp CBSSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred CCccCCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccc
Confidence 44455799999999999999999964 345666666655 78999985 345689999999999987641
Q ss_pred -----CcceEEEEEecCCC---CC---CCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCC
Q 016030 118 -----SYNYWISAGVRGRK---PA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPT 186 (396)
Q Consensus 118 -----~~~y~ir~~~~~~~---~~---~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (396)
.+.||-.....+.. .+ ...+..++++. . ..
T Consensus 145 ~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~--~---------------------------------~~---- 185 (343)
T 3cg8_A 145 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK--G---------------------------------DV---- 185 (343)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT--T---------------------------------CC----
T ss_pred cCCCCceEEEEecCccccccchhhhhcCCeEEEEEecC--C---------------------------------CC----
Confidence 12333322111100 00 01111112110 0 00
Q ss_pred ccceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEe
Q 016030 187 NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 266 (396)
Q Consensus 187 ~~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (396)
..++++.+.. ..|.|||..+.. ...+.+
T Consensus 186 ~pd~e~~l~~--------~d~~iNG~~~~~--------------------------------------------~~~l~v 213 (343)
T 3cg8_A 186 LPDATHTIVF--------NDMTINNRKPHT--------------------------------------------GPDFEA 213 (343)
T ss_dssp CCSEEEEEEE--------ETTEETTCCTTC--------------------------------------------CCCEEE
T ss_pred CCCceEEEEc--------ccceecccCCCC--------------------------------------------CccEEe
Confidence 0123443321 137899876410 123788
Q ss_pred ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc---C
Q 016030 267 GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---D 343 (396)
Q Consensus 267 ~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a---d 343 (396)
+.|++|+|+|.|.+ ...||||||||.|+|++. |.+.. ....+.||||+.|+|++++.|+|++ +
T Consensus 214 ~~Ge~vri~l~N~g------~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~ 279 (343)
T 3cg8_A 214 TVGDRVEIVMITHG------EYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGV 279 (343)
T ss_dssp ETTCEEEEEEEEES------SCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTT
T ss_pred CCCCEEEEEEEcCC------ccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCC
Confidence 99999999999976 369999999999998743 33321 1123578999999999999999994 8
Q ss_pred CCeeeEEeecchhhhhcCcEEEEeeccccccCCCCccccc
Q 016030 344 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALAC 383 (396)
Q Consensus 344 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~c 383 (396)
|||.|+||||+++|++.||+.+|.+...+ ..+|.+.+.|
T Consensus 280 ~pG~w~~HCHi~~H~~~GM~g~~~V~~~~-~~~P~y~~~~ 318 (343)
T 3cg8_A 280 GAGAWMYHCHVQSHSDMGMVGLFLVKKPD-GTIPGYEPHE 318 (343)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTT-SCCSCC----
T ss_pred CCeeEEEeCCCHHHHhccCcEEEEEecCC-CCCCCCCCCC
Confidence 99999999999999999999999987643 3466666655
No 21
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.94 E-value=3.8e-26 Score=215.60 Aligned_cols=220 Identities=14% Similarity=0.163 Sum_probs=149.3
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
..++|+++.|+++++||.|.... ...+++-|.. ..+.||.+- ++...|.|||+++..+.+++ +| +||....
T Consensus 64 pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~-~G-t~~yH~H 134 (288)
T 3gdc_A 64 PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP-FG-THLYHCH 134 (288)
T ss_dssp SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS-CE-EEEEECC
T ss_pred CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC-Cc-cEEEEec
Confidence 34689999999999999999764 4567777754 467899864 24467899999999999865 44 8988754
Q ss_pred ecCCCCCC-CCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc-C--
Q 016030 127 VRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-N-- 202 (396)
Q Consensus 127 ~~~~~~~~-~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-- 202 (396)
......+. ..-.+.|....... .+ ..++++.++...... +
T Consensus 135 ~~~~~~~~~~Gl~G~liV~~~~~-------~~-----------------------------~~d~e~~l~~~d~~~~~g~ 178 (288)
T 3gdc_A 135 QSPLAPHIAKGLYGGFIVEPKEG-------RP-----------------------------PADDEMVMVMNGYNTDGGD 178 (288)
T ss_dssp CSSHHHHHHTTCEEEEEEECSSC-------CC-----------------------------CCSEEEEEEEEEECCSSTT
T ss_pred CcchHHHHhCcCeEEEEEeCCcc-------CC-----------------------------CCcceEEEEEeeEecCCCC
Confidence 32100000 01123333321110 00 011222221110000 1
Q ss_pred CeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCC
Q 016030 203 GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 282 (396)
Q Consensus 203 g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~ 282 (396)
....|.|||..|... ...+.++.|++|+|.|.|.+..
T Consensus 179 ~~~~~~iNG~~~~~~-------------------------------------------~~~l~v~~Ge~vr~~l~N~g~~ 215 (288)
T 3gdc_A 179 DNEFYSVNGLPFHFM-------------------------------------------DFPVKVKQHELVRIHLINVLEY 215 (288)
T ss_dssp CCSEEEETTSTTHHH-------------------------------------------HSCEEEETTCCEEEEEEECCCS
T ss_pred CcceEEECccccccc-------------------------------------------CcccccCCCCEEEEEEEeCCCC
Confidence 123588898765310 0126788999999999997521
Q ss_pred CCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhhcCc
Q 016030 283 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 362 (396)
Q Consensus 283 ~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM 362 (396)
...||||||||.|+|++.|.. +..+.++||+.|+|++++.|+|++++||.|+||||+++|++.||
T Consensus 216 ----~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM 280 (288)
T 3gdc_A 216 ----DPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGW 280 (288)
T ss_dssp ----SSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTC
T ss_pred ----CcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCC
Confidence 246999999999999875421 12357999999999999999999999999999999999999999
Q ss_pred EEEEeec
Q 016030 363 GVVLALG 369 (396)
Q Consensus 363 ~~~~~~~ 369 (396)
|..|.|.
T Consensus 281 ~~~~~V~ 287 (288)
T 3gdc_A 281 MGFFEVS 287 (288)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9998763
No 22
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.93 E-value=8.4e-26 Score=215.96 Aligned_cols=233 Identities=18% Similarity=0.239 Sum_probs=146.0
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeE-EEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 127 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~-VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~ 127 (396)
++|+++.|+++++||.|.... ...++..|.... ..+.||.+. +....|.|||+++..+.+++ +| +||-....
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~-~G-t~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP-AG-TMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS-CE-EEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC-CE-EEEEEccC
Confidence 689999999999999998753 456666665432 236899864 34467999999999999975 43 89986543
Q ss_pred cCCCCCC-CCcceEEEEccCCCCCCCCCCCCCCCCC-CCCcccccccccccccCCCCCCCCccceEEEEeecccccCCeE
Q 016030 128 RGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRW-DDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT 205 (396)
Q Consensus 128 ~~~~~~~-~~~~~il~y~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~ 205 (396)
....... ..-.+.|........ + .+ ... .++. ..+.............. . .......
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~~--~---~~--~~~d~e~~--l~l~dw~~~~~~~~~~~-~-----------~~~~~~d 165 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNPL--P---IE--KTVTKDYI--LMLSDWVSSWANKPGEG-G-----------IPGDVFD 165 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSCC--H---HH--HTCCEEEE--EEEEEECGGGTTCTTCC-C-----------CTTCCCC
T ss_pred ChhhhhccCCCEEEEEEcCCCcc--c---cc--ccccceeE--EEEEeeccccccccccC-C-----------CCCCcCc
Confidence 2100000 011233333221100 0 00 000 0000 00000000000000000 0 0000122
Q ss_pred EEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCCC
Q 016030 206 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 285 (396)
Q Consensus 206 ~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~~ 285 (396)
.|.|||..+.. ...+.++.|++++|+|.|.+
T Consensus 166 ~~~ING~~~~~--------------------------------------------~~~l~v~~G~~vrlrliN~~----- 196 (318)
T 3g5w_A 166 YYTINAKSFPE--------------------------------------------TQPIRVKKGDVIRLRLIGAG----- 196 (318)
T ss_dssp EEEETTBCBTS--------------------------------------------SCCEEECTTCEEEEEEEECS-----
T ss_pred EEEEcCcCCCC--------------------------------------------CccEEeCCCCEEEEEEEeCC-----
Confidence 47888876421 01367899999999999986
Q ss_pred CCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhhh------
Q 016030 286 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH------ 359 (396)
Q Consensus 286 ~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~~------ 359 (396)
...||||||||.|+|+++..+.. .+|.+|||+.|+|++++.|+|+++|||.|+||||+++|++
T Consensus 197 -~~~h~~hlhGh~f~vi~~dG~~~----------~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~ 265 (318)
T 3g5w_A 197 -DHVHAIHTHGHISQIAFKDGFPL----------DKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPD 265 (318)
T ss_dssp -SSCEEEEETTSCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSS
T ss_pred -CceEEEEECCcEEEEEecCCccc----------CCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCC
Confidence 34799999999999999853322 2467999999999999999999999999999999999998
Q ss_pred cCcEEEEeec
Q 016030 360 IGMGVVLALG 369 (396)
Q Consensus 360 ~GM~~~~~~~ 369 (396)
.|||.++.+.
T Consensus 266 ~Gm~~~i~~~ 275 (318)
T 3g5w_A 266 GGIMTTIEYE 275 (318)
T ss_dssp CBSEEEEEET
T ss_pred CCCEEEEEEC
Confidence 5788887654
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.93 E-value=3.8e-25 Score=207.51 Aligned_cols=218 Identities=16% Similarity=0.260 Sum_probs=147.7
Q ss_pred CCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCC-------
Q 016030 44 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD------- 116 (396)
Q Consensus 44 ~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~------- 116 (396)
.+...++|+++.|+++++++.|... ....+..-|..+.. +.||.+ +..-.|.||+.+..-+.+++.
T Consensus 31 g~~pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~ 103 (276)
T 3kw8_A 31 ASVPGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGT 103 (276)
T ss_dssp CBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred CcccCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCc
Confidence 3455689999999999999999964 45677777765443 589987 344568999999888888752
Q ss_pred ----CCcceEEEEEecCCC---CCCCC-cceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCcc
Q 016030 117 ----PSYNYWISAGVRGRK---PATPP-ALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNF 188 (396)
Q Consensus 117 ----~~~~y~ir~~~~~~~---~~~~~-~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (396)
..+.||-.....+.. .+... -.+.|...... .+ ..
T Consensus 104 ~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~---------------------------------~~----~~ 146 (276)
T 3kw8_A 104 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG---------------------------------DV----LP 146 (276)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT---------------------------------CC----CC
T ss_pred cCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC---------------------------------Cc----cc
Confidence 112454443221100 00000 01111111100 00 01
Q ss_pred ceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeec
Q 016030 189 HRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGL 268 (396)
Q Consensus 189 ~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (396)
++++.+.. ..|.|||..+.. ...+.++.
T Consensus 147 drE~~l~l--------~~~~iNG~~~~~--------------------------------------------~p~i~v~~ 174 (276)
T 3kw8_A 147 DATHTIVF--------NDMTINNRKPHT--------------------------------------------GPDFEATV 174 (276)
T ss_dssp SEEEEEEE--------ETTEETTCCTTC--------------------------------------------CCCEEEET
T ss_pred ccceEEEe--------cccccceecccC--------------------------------------------CCCEEEec
Confidence 44444422 237899987531 02378899
Q ss_pred CCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcC---CC
Q 016030 269 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NP 345 (396)
Q Consensus 269 g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad---np 345 (396)
|++|+|+|.|.+ ...||||||||.|+|++. |.++.. ...+.+|||+.|+|++++.++|+++ ||
T Consensus 175 G~~vri~l~N~~------~~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~np 240 (276)
T 3kw8_A 175 GDRVEIVMITHG------EYYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGA 240 (276)
T ss_dssp TCEEEEEEEEES------SCCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCS
T ss_pred CCEEEEEEecCC------CcceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCC
Confidence 999999999976 358999999999998764 333211 1234699999999999999999987 89
Q ss_pred eeeEEeecchhhhhcCcEEEEeeccc
Q 016030 346 GAWAFHCHIEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 346 G~w~~HCHi~~H~~~GM~~~~~~~~~ 371 (396)
|.|+||||+++|++.||+.+|.|.+.
T Consensus 241 G~w~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 241 GAWMYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred CeEEEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999999988754
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.93 E-value=6.2e-25 Score=208.16 Aligned_cols=220 Identities=18% Similarity=0.256 Sum_probs=142.8
Q ss_pred CCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCC------
Q 016030 43 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD------ 116 (396)
Q Consensus 43 ~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~------ 116 (396)
+.+.+.++|+++.|++++++|.|.... ...|..-|..+. -+.||.++. .-.|.|||.+....++.+.
T Consensus 52 ~gt~PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~ 124 (299)
T 3t9w_A 52 GATVPGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADG 124 (299)
T ss_dssp CCBSSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTS
T ss_pred CCCccCceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCC
Confidence 345566899999999999999998653 456666665443 367997642 2247899998887776532
Q ss_pred -----CCcceEEEEEecCCCCC---CCCc-ceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCc
Q 016030 117 -----PSYNYWISAGVRGRKPA---TPPA-LTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN 187 (396)
Q Consensus 117 -----~~~~y~ir~~~~~~~~~---~~~~-~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (396)
..++||-.....+.... ...+ .+.|.... . ....
T Consensus 125 ~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~---------------------------------~----~~~~ 167 (299)
T 3t9w_A 125 SWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRR---------------------------------Q----GDLL 167 (299)
T ss_dssp CEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEEC---------------------------------T----TCCC
T ss_pred cCCCCCceeEEEecCCcccccchhhhcccccceEEEec---------------------------------c----cccC
Confidence 11244433211110000 0000 01111100 0 0011
Q ss_pred cceEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEee
Q 016030 188 FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLG 267 (396)
Q Consensus 188 ~~~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (396)
.++++.++. ..|.+|+..+.. ...+.++
T Consensus 168 ~d~e~~l~~--------~~~~~Ng~~~~~--------------------------------------------~p~l~v~ 195 (299)
T 3t9w_A 168 PKRQFTVVF--------NDMMINNRAHHD--------------------------------------------APTFEAN 195 (299)
T ss_dssp CSEEEEEEE--------ETTEETTCCTTC--------------------------------------------CCEEEEE
T ss_pred ccccceeee--------eeeeecCccccc--------------------------------------------cccceec
Confidence 245554432 237788765421 1247889
Q ss_pred cCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEE---EEEEEcCC
Q 016030 268 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT---ALRFVADN 344 (396)
Q Consensus 268 ~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~---~irf~adn 344 (396)
.|++|+|+|.|.+ ...||||||||.|+|+..+.... ....+.++||+.|.|+... +++|+++|
T Consensus 196 ~Ge~Vr~~liN~~------~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dn 261 (299)
T 3t9w_A 196 LGERVEWIAIGHG------SNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVG 261 (299)
T ss_dssp TTCEEEEEEEEES------SCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTC
T ss_pred CCCEEEEEEEecc------ccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCC
Confidence 9999999999976 45899999999999988754332 2234578999999998654 55567889
Q ss_pred CeeeEEeecchhhhhcCcEEEEeecccc
Q 016030 345 PGAWAFHCHIEPHFHIGMGVVLALGVET 372 (396)
Q Consensus 345 pG~w~~HCHi~~H~~~GM~~~~~~~~~~ 372 (396)
||.|+|||||++|++.||+.+|.|...+
T Consensus 262 PG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 262 PGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp SEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 9999999999999999999999887543
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.91 E-value=1.4e-23 Score=200.21 Aligned_cols=93 Identities=19% Similarity=0.372 Sum_probs=78.8
Q ss_pred EEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE--
Q 016030 264 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV-- 341 (396)
Q Consensus 264 ~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~-- 341 (396)
+.++.|++|+|+|.|.+ ...||||||||.|+|+..+.... ....+.++||+.|.|++.+.++|.
T Consensus 176 l~v~~Ge~vr~~liN~g------~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 176 FEATVGDRVEFVMITHG------EYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp EEEETTCEEEEEEEEES------SCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETT
T ss_pred cccccCCEEEEEEeccc------ccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEec
Confidence 67889999999999976 45899999999999988754322 124578999999999988877765
Q ss_pred -cCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 342 -ADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 342 -adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
++|||.|+||||+++|++.|||.+|.|..
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEEC
Confidence 57999999999999999999999998764
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.91 E-value=2.3e-24 Score=235.42 Aligned_cols=89 Identities=27% Similarity=0.510 Sum_probs=80.1
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|+|+|.|.+. ....||||||||.|+|++++ |.|||||.|+|+++++|+|++
T Consensus 971 ~~~v~~G~~vr~~l~N~g~----~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~a 1030 (1065)
T 2j5w_A 971 GLTMHVGDEVNWYLMGMGN----EIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFP 1030 (1065)
T ss_dssp CCEEETTCEEEEEEEECCS----TTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECC
T ss_pred cEEeCCCCEEEEEEEeCCC----CCcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEEC
Confidence 3678999999999999741 13689999999999999863 579999999999999999999
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEeeccc
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 371 (396)
||||.|+||||+++|++.|||.+|.|...
T Consensus 1031 d~pG~w~~HCH~~~H~~~GM~~~~~V~~~ 1059 (1065)
T 2j5w_A 1031 RTPGIWLLHCHVTDHIHAGMETTYTVLQN 1059 (1065)
T ss_dssp CSCEEEEEEECCHHHHHTTCEEEEEEECC
T ss_pred CCCeeEEEEeCCHHHHhcCCcEEEEEecC
Confidence 99999999999999999999999988754
No 27
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.88 E-value=2.7e-23 Score=218.70 Aligned_cols=84 Identities=19% Similarity=0.337 Sum_probs=75.3
Q ss_pred EEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcC
Q 016030 264 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 343 (396)
Q Consensus 264 ~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad 343 (396)
+.++.|+++.|.|.|.+. ....||||||||.|+|+ +.++|||.|.|++.+.|.|++|
T Consensus 628 l~v~~Ge~vr~rliN~g~----~~~~h~~HlhGh~f~v~-------------------~~~~Dtv~l~Pg~~~~v~~~ad 684 (742)
T 2r7e_A 628 LSVCLHEVAYWYILSIGA----QTDFLSVFFSGYTFKHK-------------------MVYEDTLTLFPFSGETVFMSME 684 (742)
T ss_dssp CCCCSSCCCEEEEEECSS----CCCCCCCEESSSCCCCB-------------------SSSBCSSCCCCCSSEECCEECC
T ss_pred EEEeCCCEEEEEEEeCCC----CcceEEEEEcCcEEEEe-------------------ccceeEEEECCCcEEEEEEEcC
Confidence 678999999999999652 13479999999999986 1589999999999999999999
Q ss_pred CCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 344 NPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 344 npG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+||.|+||||+++|++.|||.+|.|..
T Consensus 685 ~pG~w~~hcH~~~H~~~GM~~~~~V~~ 711 (742)
T 2r7e_A 685 NPGLWILGCHNSDFRNRGMTALLKVSS 711 (742)
T ss_dssp CCCCSCCEECCCSTTHHHHSCCCCCCC
T ss_pred CCeEEEEEeCCchHHhCCCeEEEEEEe
Confidence 999999999999999999999998753
No 28
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=6.3e-22 Score=206.73 Aligned_cols=247 Identities=15% Similarity=0.184 Sum_probs=140.5
Q ss_pred CCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceee---e-eEeceEEecCCceEEEEEeeCCCC---
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---P-FEVDDMDIYSGESYSVLLTTNQDP--- 117 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~---P-~~v~~l~i~~GqRyDVlv~~~~~~--- 117 (396)
+...|+|++++|+++++||+|.... ...|+..|.... .++||.+.. | ..+....|.|||+++..+++++..
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~ 142 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPE 142 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCC
T ss_pred CCcCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCC
Confidence 3455899999999999999999863 344444444432 689998853 2 234467799999999999998753
Q ss_pred -Cc----ceEEEEEecCC--CCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCccc-ccccccccccCCCCCCCCccc
Q 016030 118 -SY----NYWISAGVRGR--KPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS-KSFSNKIFALMGSPKPPTNFH 189 (396)
Q Consensus 118 -~~----~y~ir~~~~~~--~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (396)
.| +||-....... ......+ ++|..........+ ..+. ...++... ..+.... .-. ... ...
T Consensus 143 ~~G~~c~T~wYHsH~~~~~q~~~GL~G-~lIV~~~~~~~~~~--~~~~--~~~e~~l~l~~~d~~~-~w~--~~~--~~~ 212 (647)
T 1sdd_B 143 NPGSACRAWAYYSAVNPEKDIHSGLIG-PLLICRKGTLDKET--NMPV--DMREFVLLFMVFDEKK-SWY--YDK--KPT 212 (647)
T ss_dssp SSSCSEEEEEEECCSSHHHHHTTTCEE-EEEEECTTSSCTTS--CCCS--SCCEEEEEEEEEEGGG-SSC--CC------
T ss_pred CCCCCceEEEEccCCCCcccccccCcc-CEEEeeCCCccccc--CCCC--cceeEEEEEEeecCcc-ccc--ccc--Ccc
Confidence 35 89988654310 0111212 33333221110000 0000 00111000 0000000 000 000 000
Q ss_pred eEEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecC
Q 016030 190 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 269 (396)
Q Consensus 190 ~~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 269 (396)
..+...... .......+.|||..+.. ..+.++.|
T Consensus 213 ~~~~~~~~~-~~~~~~~~~iNG~~~~~---------------------------------------------p~l~v~~G 246 (647)
T 1sdd_B 213 RSWRRASSE-VKNSHEFHAINGMIYNL---------------------------------------------PGLRMYEQ 246 (647)
T ss_dssp ------------CCCEEEEETTBSSCC---------------------------------------------CCCEEETT
T ss_pred cccccCCcc-hhhcCceeccCCEecCC---------------------------------------------CCeEEcCC
Confidence 000000000 00112346777766411 12577899
Q ss_pred CEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeE
Q 016030 270 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 349 (396)
Q Consensus 270 ~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 349 (396)
++++|+|.|.+.. ...||||+|||.|+|++.+ +.++||+.|.|++++.|+|++++||.|+
T Consensus 247 ~~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~ 306 (647)
T 1sdd_B 247 EWVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWL 306 (647)
T ss_dssp CEEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEE
T ss_pred CEEEEEEEeCCCC----CcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEee
Confidence 9999999997621 2489999999999998652 4589999999999999999999999999
Q ss_pred EeecchhhhhcCcEEEEeec
Q 016030 350 FHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 350 ~HCHi~~H~~~GM~~~~~~~ 369 (396)
||||+++|++.||+.+|.|.
T Consensus 307 ~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 307 LDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp EECCCHHHHTTTCEEEEEEE
T ss_pred cccCcccccccccccceeee
Confidence 99999999999999999884
No 29
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.87 E-value=4.9e-24 Score=202.83 Aligned_cols=229 Identities=11% Similarity=0.101 Sum_probs=129.1
Q ss_pred CCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceee----eeEeceEEecCCceEEEEEeeCCCCC---
Q 016030 46 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDPS--- 118 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~----P~~v~~l~i~~GqRyDVlv~~~~~~~--- 118 (396)
...++|++++|+++|+||+|... ....|+..|..+ ..+.||.+.. ++......|.||||++..+++++..|
T Consensus 57 ~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~-~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~ 134 (306)
T 1sdd_A 57 LLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKY-SKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTH 134 (306)
T ss_dssp SCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCC-CTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCS
T ss_pred ccCCEEEEeCCCEEEEEEEECCC-CcccEeecceec-ccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCC
Confidence 34578999999999999999764 444555555442 2268998762 23334578999999999999987543
Q ss_pred -----cceEEEEEecCCC--CCCCCcceEEEEccCCCCCCCCCCCCCCCCC-CCCcccccccccccccCCCCCCCCccce
Q 016030 119 -----YNYWISAGVRGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRW-DDYDHSKSFSNKIFALMGSPKPPTNFHR 190 (396)
Q Consensus 119 -----~~y~ir~~~~~~~--~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (396)
++||......... .....+ +++.+........+. + ... .++. ..+ .... .
T Consensus 135 ~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~~~~---~--~~~d~e~~------l~~-~d~d-~-------- 192 (306)
T 1sdd_A 135 DDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTEDGT---Q--KMFEKQHV------LMF-AVFD-E-------- 192 (306)
T ss_dssp SSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCTTSS---B--SSSCCCCC------CBC-CEEE-T--------
T ss_pred CCCCceEEEEeccCCchhhhccCceE-EEEEccCCCCCccCC---c--CcccceEE------EEE-Eecc-c--------
Confidence 5999987532100 011222 344442211100000 0 000 0000 000 0000 0
Q ss_pred EEEEeecccccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCC
Q 016030 191 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 270 (396)
Q Consensus 191 ~i~~~~~~~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 270 (396)
...........|.|||..+.. . ..+.++.|+
T Consensus 193 -----~~~~~~~~~~~~~ING~~~~~--~------------------------------------------p~l~v~~G~ 223 (306)
T 1sdd_A 193 -----SKSWNQTSSLMYTVNGYVNGT--M------------------------------------------PDITVCAHD 223 (306)
T ss_dssp -----TSSSSCCCCEEECSSSCCSSC--C------------------------------------------CCCCCCCC-
T ss_pred -----ccccccCCCcceeeCCEecCC--C------------------------------------------cceEEcCCC
Confidence 000000112346788766421 0 114567899
Q ss_pred EEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEE
Q 016030 271 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 350 (396)
Q Consensus 271 ~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~ 350 (396)
+++|.|.|.+.. ...||||||||.|++ + +.++||+.|.||+.+.|+|++++||.|+|
T Consensus 224 ~vrlrliN~g~~----~~~h~~hlhG~~~~~----d---------------G~~~dtv~l~pger~~v~~~~~~pG~~~~ 280 (306)
T 1sdd_A 224 HISWHLIGMSSG----PELFSIHFNGQVLEQ----N---------------HHKISAITLVSATSTTANMTVSPEGRWTI 280 (306)
T ss_dssp -----BBCCCSS----SCEECCBCSSTTCEE----T---------------TEECSCCCEETTCCBC--------CCCCC
T ss_pred EEEEEEEeCCCC----CccEEEEECCcEeee----C---------------CEEcceEEECCCcEEEEEEEcCCCeEEEE
Confidence 999999997631 247999999999985 1 13699999999999999999999999999
Q ss_pred eecchhhhhcCcEEEEeecc
Q 016030 351 HCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 351 HCHi~~H~~~GM~~~~~~~~ 370 (396)
|||+++|++.||+.+|.+.+
T Consensus 281 hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 281 ASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp BCCSTTTGGGTCBCCC----
T ss_pred EeCChHHHhcCCeEEEEEec
Confidence 99999999999999987754
No 30
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.87 E-value=2.5e-21 Score=211.61 Aligned_cols=86 Identities=5% Similarity=0.147 Sum_probs=69.8
Q ss_pred eEEEEcCCCeEEEEEEecCcc-ceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe
Q 016030 49 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 127 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~-~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~ 127 (396)
+.++|++|++|||||||+|.. ..+.|+|+||+|+ ++|+.+|+|.|+|||||||+|++++ +| .|+|+...
T Consensus 271 ~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~-pG-~y~i~~h~ 340 (1065)
T 2j5w_A 271 SGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PG-EWMLSCQN 340 (1065)
T ss_dssp CCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS-CE-EEEEEECS
T ss_pred cceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC-Ce-eEEEEecC
Confidence 358999999999999999986 6899999999999 4678999999999999999999988 44 89998765
Q ss_pred cCCCCCCCCcceEEEEccC
Q 016030 128 RGRKPATPPALTLLNYHPT 146 (396)
Q Consensus 128 ~~~~~~~~~~~~il~y~~~ 146 (396)
..... ....+.+++.+.
T Consensus 341 ~~h~~--~Gm~~~~~V~~~ 357 (1065)
T 2j5w_A 341 LNHLK--AGLQAFFQVQEC 357 (1065)
T ss_dssp HHHHH--TTCEEEEEEECS
T ss_pred cchhh--CCCEEEEEEecC
Confidence 43211 124577777543
No 31
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.82 E-value=1.5e-19 Score=173.37 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=145.5
Q ss_pred CCCceEEEEcCCCeEEEEEEecCcc-ceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEE
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 123 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~-~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~i 123 (396)
+...++|+|++|+++|+|++|.... ....+.+.|. .+.||... ...|.|||++++.+++++ +| +||.
T Consensus 66 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~----~~~dG~~~------~~~i~PG~~~~y~f~~~~-~G-t~wy 133 (327)
T 1kbv_A 66 DVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAA----TGQGGGAA------ATFTAPGRTSTFSFKALQ-PG-LYIY 133 (327)
T ss_dssp BSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGTT------TTCBCTTEEEEEEEECCS-CE-EEEE
T ss_pred ccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcc----ccCCCCCc------ceeecCCCEEEEEEECCC-Ce-EEEE
Confidence 3345789999999999999999753 3445555443 36788752 224899999999999987 44 9999
Q ss_pred EEEecCCCC---CCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccc-
Q 016030 124 SAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN- 199 (396)
Q Consensus 124 r~~~~~~~~---~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 199 (396)
......... ....+ +++.+ ... .. | ..++ .....+...... ... ........ ....
T Consensus 134 H~h~~~~~~~~~~Gl~G-~~iV~-~~~--~~-----p---~~d~-e~~l~~~d~~~~----~~~--~~~g~~~~-~~~~~ 193 (327)
T 1kbv_A 134 HCAVAPVGMHIANGMYG-LILVE-PKE--GL-----P---KVDK-EFYIVQGDFYTK----GKK--GAQGLQPF-DMDKA 193 (327)
T ss_dssp ECCCSSHHHHHHTTCEE-EEEEE-CTT--CC-----C---CCSE-EEEEEEEEECBS----SCT--TCCEEECB-CHHHH
T ss_pred EeCCCChhhhhhcceEE-EEEEe-cCC--CC-----C---CCce-EEEEEeeeeecc----Ccc--cccccccc-ChhHh
Confidence 854321000 11111 23333 211 11 1 1110 000000000000 000 00000000 0000
Q ss_pred ccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecC
Q 016030 200 TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNA 279 (396)
Q Consensus 200 ~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~ 279 (396)
.......+.|||..+... ....+.++.|++++|.|.|.
T Consensus 194 ~~~~~~~~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~ 231 (327)
T 1kbv_A 194 VAEQPEYVVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNG 231 (327)
T ss_dssp HHTCCSEEEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEE
T ss_pred ccCCCceEEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECC
Confidence 000112467787654210 01247889999999999997
Q ss_pred CCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhhh-
Q 016030 280 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF- 358 (396)
Q Consensus 280 ~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H~- 358 (396)
+. ...|+||||||.|+||+..++.. .|.++|++.|.+|+.+.|.|++++||.|++|||+.+|.
T Consensus 232 ~~-----~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~ 295 (327)
T 1kbv_A 232 GP-----NLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAF 295 (327)
T ss_dssp ES-----SCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHH
T ss_pred CC-----CCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccc
Confidence 52 35899999999999999854432 26789999999999999999999999999999999995
Q ss_pred hcCcEEEEeecc
Q 016030 359 HIGMGVVLALGV 370 (396)
Q Consensus 359 ~~GM~~~~~~~~ 370 (396)
..||+.+|.+..
T Consensus 296 ~~g~~a~l~~~g 307 (327)
T 1kbv_A 296 NKGALGQLKVEG 307 (327)
T ss_dssp HSSCEEEEEEES
T ss_pred cCCcEEEEEECC
Confidence 888888876643
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.82 E-value=7.2e-19 Score=169.73 Aligned_cols=90 Identities=26% Similarity=0.354 Sum_probs=74.9
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEEEEEE
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRF 340 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~~irf 340 (396)
.+.++.|++++|++.|.+ ...|++|+|||.|+|++ +|.+ .+++ ++||+.|.+|+.+.|.|
T Consensus 232 ~l~v~~G~r~Rl~n~~~~------~~~~~~~i~gh~~~Vi~--dG~~----------~~~p~~~~dtv~l~pGer~~v~v 293 (340)
T 2bw4_A 232 ALTAAVGERVLVVHSQAN------RDTRPHLIGGHGDYVWA--TGKF----------RNPPDLDQETWLIPGGTAGAAFY 293 (340)
T ss_dssp CEEEETTCEEEEEEEESS------SCBCEEEETCCEEEEET--TCCT----------TSCCEEEESCCCBCTTEEEEEEE
T ss_pred ceEcCCCCEEEEEECCCC------CccceEEecCcceEEeC--CCcc----------cCCccccceEEEeCCCceEEEEE
Confidence 478899999998877754 35789999999999986 3333 1233 57999999999999999
Q ss_pred EcCCCeeeEEeecch-hhhhcCcEEEEeecc
Q 016030 341 VADNPGAWAFHCHIE-PHFHIGMGVVLALGV 370 (396)
Q Consensus 341 ~adnpG~w~~HCHi~-~H~~~GM~~~~~~~~ 370 (396)
++++||.|+||||++ +|++.||+.+|.+..
T Consensus 294 ~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 294 TFRQPGVYAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred ECCCCeeeEEEcCchHHHHhCCCEEEEEECC
Confidence 999999999999999 599999998887653
No 33
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.81 E-value=4.6e-21 Score=202.09 Aligned_cols=85 Identities=20% Similarity=0.419 Sum_probs=76.4
Q ss_pred EEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcC
Q 016030 264 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 343 (396)
Q Consensus 264 ~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad 343 (396)
+.++.|++++|.|.|.+.. ...||||||||.|+|++.+ +.++||+.|+|++++.|+|++|
T Consensus 370 l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCS
T ss_pred eEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeC
Confidence 5678999999999997632 3489999999999998863 2489999999999999999999
Q ss_pred CCeeeEEeecchhhhhcCcEEEEee
Q 016030 344 NPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 344 npG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+||.|+||||+++|++.||+.+|.|
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred CCCceEEEecccccccccccccccc
Confidence 9999999999999999999999987
No 34
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.75 E-value=4.1e-17 Score=156.96 Aligned_cols=90 Identities=22% Similarity=0.198 Sum_probs=72.1
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEEEEEE
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRF 340 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~~irf 340 (396)
.+.++.|++++|++.|.+ ...|++++|||.|+|++ +|.+. .++ ++||+.|.||+.+.|.|
T Consensus 226 ~l~v~~Ger~Rl~n~~~~------~~~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v 287 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPN------RDSRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALY 287 (333)
T ss_dssp CEEEETTCEEEEEEEESS------SCBCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ceEecCCCEEEEEECCCC------CccccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEE
Confidence 478899999998877654 22345557788899887 34431 222 68999999999999999
Q ss_pred EcCCCeeeEEeecchhhh-hcCcEEEEeecc
Q 016030 341 VADNPGAWAFHCHIEPHF-HIGMGVVLALGV 370 (396)
Q Consensus 341 ~adnpG~w~~HCHi~~H~-~~GM~~~~~~~~ 370 (396)
++++||.|+||||++.|+ +.|||.+|.+..
T Consensus 288 ~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 288 KFLQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred EcCCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 999999999999999997 999999998754
No 35
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.74 E-value=2.5e-18 Score=164.93 Aligned_cols=111 Identities=15% Similarity=0.056 Sum_probs=93.4
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 90 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~ 90 (396)
.+.+||||+.+..|. | ..++|++|++|||||||+|+.+.+.|+|+||+|+||+.||++
T Consensus 198 ~~~~~iNG~~~~~~~------------~----------~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~ 255 (327)
T 1kbv_A 198 PEYVVFNGHVGALTG------------D----------NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK 255 (327)
T ss_dssp CSEEEETTSTTTTSG------------G----------GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS
T ss_pred CceEEEcCcccCCCC------------c----------eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc
Confidence 478999999986531 1 358999999999999999998999999999999999999999
Q ss_pred eeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccC
Q 016030 91 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 146 (396)
Q Consensus 91 v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~ 146 (396)
++|+.++++.|++||||||++++++ +| .|||+....... ......++|+|.+.
T Consensus 256 ~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 256 LINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp CEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred CCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEecccccc-ccCCcEEEEEECCC
Confidence 9999999999999999999999997 44 999988654321 01235799999754
No 36
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.67 E-value=1.5e-15 Score=151.71 Aligned_cols=234 Identities=12% Similarity=0.121 Sum_probs=144.2
Q ss_pred ceEEEEcCCCeEEEEEEecCc-cceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 48 PQILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 48 ~~~~~v~~G~~yRlRlINa~~-~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
.++|+++.|+++|+||+|... .....+++.|+. ..||... ...|.||+++++.+++++ +| +||....
T Consensus 59 gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~-~G-t~~yH~H 126 (442)
T 2zoo_A 59 GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN-PG-LYIYHCA 126 (442)
T ss_dssp CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS-CE-EEEEECC
T ss_pred CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC-Ce-EEEEecC
Confidence 468999999999999999964 245667777754 4688653 225899999999999876 44 8998753
Q ss_pred ecCCCCCC-CCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc-CCe
Q 016030 127 VRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-NGF 204 (396)
Q Consensus 127 ~~~~~~~~-~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~g~ 204 (396)
......+. ..-.+.|.+.... .. + .++ . ++...+.+-..... .... ........... ...
T Consensus 127 ~~~~~~~~~~Gl~G~~iv~~~~--~~-----~---~~d---~--e~~l~l~d~~~~~~-~~~~--~~~~~~~~~~~~~~~ 188 (442)
T 2zoo_A 127 TAPVGMHIANGMYGLILVEPKE--GL-----A---PVD---R--EYYLVQGDFYTKGE-FGEA--GLQPFDMAKAIDEDA 188 (442)
T ss_dssp CSSHHHHHHTTCEEEEEEECTT--CC-----C---CCS---E--EEEEEEEEECBSSC-TTCC--EEECBCHHHHHTTCC
T ss_pred CCChHHHHhCccEEEEEEeCCC--CC-----C---CCC---c--eEEEEeeeeeccCc-cccc--ccccCChhHhccCCC
Confidence 21100010 0112344443221 00 1 110 0 00000000000000 0000 00000000000 012
Q ss_pred EEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCCCC
Q 016030 205 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 284 (396)
Q Consensus 205 ~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~~ 284 (396)
..+.|||..+... ....+.++.|++++|.|.|.+.
T Consensus 189 ~~~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~--- 223 (442)
T 2zoo_A 189 DYVVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGP--- 223 (442)
T ss_dssp SEEEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEES---
T ss_pred CEEEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCC---
Confidence 2456777653210 0124788899999999999752
Q ss_pred CCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecchhh-hhcCcE
Q 016030 285 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMG 363 (396)
Q Consensus 285 ~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi~~H-~~~GM~ 363 (396)
...|+||+|||.|+|++..++.. .|.+.|++.|.||+...|.|++++||.|++|||...| ...||+
T Consensus 224 --~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~ 290 (442)
T 2zoo_A 224 --NLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGAL 290 (442)
T ss_dssp --SCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCE
T ss_pred --CCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCce
Confidence 35799999999999999854322 2678999999999999999999999999999999999 589999
Q ss_pred EEEeec
Q 016030 364 VVLALG 369 (396)
Q Consensus 364 ~~~~~~ 369 (396)
.+|.+.
T Consensus 291 a~l~v~ 296 (442)
T 2zoo_A 291 AMLKVE 296 (442)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888764
No 37
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.66 E-value=4.5e-15 Score=142.88 Aligned_cols=91 Identities=26% Similarity=0.335 Sum_probs=72.7
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALR 339 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~~ir 339 (396)
..+.++.|++++|+..+.+ ...+++++|||.|+|+. +|.+ .+|+ +.||+.|++|+.+.+.
T Consensus 225 ~~l~v~~GervRlin~~~~------~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvl 286 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN------RDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAAL 286 (336)
T ss_dssp GCEEEETTCEEEEEEEESS------SCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC------CccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEE
Confidence 3578899999998655543 23566667999999996 4433 1233 5799999999999999
Q ss_pred EEcCCCeeeEEeecchhhh-hcCcEEEEeecc
Q 016030 340 FVADNPGAWAFHCHIEPHF-HIGMGVVLALGV 370 (396)
Q Consensus 340 f~adnpG~w~~HCHi~~H~-~~GM~~~~~~~~ 370 (396)
|++++||.|+||||.+.|. +.||+.+|.+..
T Consensus 287 v~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 287 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 9999999999999999986 999999998764
No 38
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.62 E-value=1.1e-14 Score=145.51 Aligned_cols=221 Identities=19% Similarity=0.244 Sum_probs=131.9
Q ss_pred ceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEe
Q 016030 48 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 127 (396)
Q Consensus 48 ~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~ 127 (396)
++.|+|++|+++|||++|.+... ..|.++++... ..+.|.||||+++.+++++ +| +||.....
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~-h~~~~~g~~~~--------------~~~~i~pG~~~~~~f~~~~-~G-t~~y~~~~ 116 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQ-HDVVVDQYAAR--------------SAIVNGKNASSTFSFVASK-VG-EFNYYCSI 116 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSC-BCCEETTTTEE--------------CCCBCSTTBEEEEEEECCS-CE-EEEEECCS
T ss_pred CCeEEEcCCCEEEEEEEcCCCCc-eEEEEccCCcc--------------cceecCCCCeEEEEEEcCC-CE-EEEEEeCC
Confidence 46899999999999999999875 56666665422 3567999999999999987 44 89886542
Q ss_pred cCCCCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeec--cc-ccCC-
Q 016030 128 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNT--QN-TING- 203 (396)
Q Consensus 128 ~~~~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~g- 203 (396)
.+.. ...-.+.|...............+......++ .............+.+... .. ..+|
T Consensus 117 ~~h~--~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~-------------p~~~d~~~~~~~~~~l~~~~~~~~~~~g~ 181 (447)
T 2dv6_A 117 AGHR--QAGMEGNIQVLPGNRAEMKSSGADITRDPADL-------------PGPIGPRQAKTVRIDLETVEVKGQLDDNT 181 (447)
T ss_dssp TTHH--HHTCEEEEEEESSCCCCCCCSSBCCBCCTTCS-------------CCCCCSCCCCEEEEEEEEEEEEEEEETTE
T ss_pred CChh--hCCCEEEEEEeCCccccCCCcchhhccChhhc-------------CCccccCCCcEEEEEEEEEEEEEeccCCc
Confidence 2100 00123555553322111000000000000000 0000000011112222110 00 0122
Q ss_pred -eEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCCC
Q 016030 204 -FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 282 (396)
Q Consensus 204 -~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~ 282 (396)
...|.+||.. | ...++++.|++++|.|.|...
T Consensus 182 ~~~~~~~NG~~---p-------------------------------------------gp~i~v~~G~~v~~rl~N~~~- 214 (447)
T 2dv6_A 182 TYTYWTFNGKV---P-------------------------------------------GPFLRVRVGDTVELHLKNHKD- 214 (447)
T ss_dssp EEEEEEETTBB---S-------------------------------------------CCCEEEETTCEEEEEEEECTT-
T ss_pred eeEEEEECCcc---C-------------------------------------------CCeEEecCCCEEEEEEEeCCC-
Confidence 2357777742 1 013788999999999999741
Q ss_pred CCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCCeeeEEeecc---hhhhh
Q 016030 283 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHI---EPHFH 359 (396)
Q Consensus 283 ~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi---~~H~~ 359 (396)
....|++|+||.. .. +| ..+++.|.||+...++|++++||.|.||||. ..|..
T Consensus 215 ---~~~~~~ih~Hg~~----~~-DG----------------~~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~ 270 (447)
T 2dv6_A 215 ---SLMVHSVDFHGAT----GP-GG----------------AAAFTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHIT 270 (447)
T ss_dssp ---CSSCBCCEETTCC----SG-GG----------------GGGGCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHH
T ss_pred ---CceeEEEeecccc----CC-CC----------------CCccEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHh
Confidence 1357999999953 11 11 1256679999999999999999999999996 47899
Q ss_pred cCcEEEEeeccc
Q 016030 360 IGMGVVLALGVE 371 (396)
Q Consensus 360 ~GM~~~~~~~~~ 371 (396)
.||+..+.+.++
T Consensus 271 ~Gl~g~l~v~~~ 282 (447)
T 2dv6_A 271 NGMYGLLLVEPE 282 (447)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCEEEEEEeCC
Confidence 999988877543
No 39
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.62 E-value=7.4e-17 Score=169.76 Aligned_cols=84 Identities=21% Similarity=0.317 Sum_probs=75.5
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++++|.|.|.+.. ...||||||||.|+|++. ++||+.|.|++.+.|+|++
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~----~~~h~~hlhGh~f~Vvg~-------------------~~Dtv~v~Pg~~~~v~~~~ 301 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTT----PEVHSIFLEGHTFLVRNH-------------------RQASLEISPITFLTAQTLL 301 (742)
T ss_dssp CCEECSSSCEEEECCCCCSS----SCCCCCCCTTCCCEETTE-------------------ECCSCCCCTTCCCEEEECC
T ss_pred ceEEcCCCEEEEEEEeCCCC----CcceEEEECCCEEEEEeE-------------------ecceEEeCCCcEEEEEEEe
Confidence 46889999999999997632 237999999999999853 6999999999999999999
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEeec
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
++||.|+||||+++|++.||+.+|.|.
T Consensus 302 ~~pG~w~~hCH~~~H~~~GM~~~~~V~ 328 (742)
T 2r7e_A 302 MDLGQFLLFCHISSHQHDGMEAYVKVD 328 (742)
T ss_dssp CSCSEECCCCCSSSSSTTSCCBCEEEC
T ss_pred CCCeeEEEEeCChhHHhCCCeEEEEEe
Confidence 999999999999999999999988775
No 40
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.59 E-value=1.7e-15 Score=151.27 Aligned_cols=113 Identities=15% Similarity=0.078 Sum_probs=92.3
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
..+++||||+.... . . .+.+++++|++|||||||+|....+.|+|+||.|+||+.||.
T Consensus 187 ~~~~~liNG~~~~~--~----------~----------~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~ 244 (442)
T 2zoo_A 187 DADYVVFNGSVGST--T----------D----------ENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG 244 (442)
T ss_dssp CCSEEEETTSTTTT--S----------G----------GGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS
T ss_pred CCCEEEECCCcCCC--C----------C----------CCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc
Confidence 45789999997531 0 0 135899999999999999999899999999999999999999
Q ss_pred eeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccCC
Q 016030 90 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 147 (396)
Q Consensus 90 ~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~~ 147 (396)
+++|..++++.|.||||+||+|++++ + +.|+++....... ......++|+|....
T Consensus 245 ~~~p~~~~~~~l~pg~r~~v~v~~~~-~-G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 245 SLKNHNVQTTLIPAGGAAIVEFKVEV-P-GTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp SCEECSBSEEEECTTEEEEEEEECCS-C-EEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred cCCCccceEEEECCCeeEEEEEEcCC-C-CeEEEEecccccc-cccCceEEEEecCCC
Confidence 99999999999999999999999987 4 4999987543220 123357999997544
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.56 E-value=7.2e-14 Score=134.50 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=87.0
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
..+.++|||+..... ..++|++|++|||||||++.. .+.|+|+||+|+||+.||.
T Consensus 164 ~~~~~~ING~~~~~~------------------------~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~ 218 (339)
T 2zwn_A 164 VADYFSVNAKSFPLT------------------------QPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGL 218 (339)
T ss_dssp CCCEEEETTBCTTSS------------------------CCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTE
T ss_pred ccceEEEccccCCCc------------------------ccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCe
Confidence 467899999876421 248999999999999999955 8999999999999999999
Q ss_pred eee-eeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCC--C--CCCCcceEEEEccC
Q 016030 90 YVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK--P--ATPPALTLLNYHPT 146 (396)
Q Consensus 90 ~v~-P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~--~--~~~~~~~il~y~~~ 146 (396)
+++ |..+|++.|.|||||||++++++. | .|++........ . ......++|+|.+.
T Consensus 219 ~~~~p~~~dtv~l~pg~r~~v~~~~~~p-G-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 219 PLDSPYYADTVLVSPGERYDVIIEADNP-G-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEEEEESEEEECTTCEEEEEEECCSC-S-EEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred ecCCCcEEEEEEECCCCEEEEEEEeCCC-e-eEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 995 899999999999999999999874 4 676665433210 0 11223688999654
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.55 E-value=5.3e-14 Score=134.13 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=86.6
Q ss_pred CCceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc
Q 016030 10 GHYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 89 (396)
Q Consensus 10 ~~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~ 89 (396)
..+.+||||+...+. ..++|++|++|||||||++.. .+.|+|+||+|+||+.||.
T Consensus 163 ~~d~~~ING~~~~~~------------------------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~ 217 (318)
T 3g5w_A 163 VFDYYTINAKSFPET------------------------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGF 217 (318)
T ss_dssp CCCEEEETTBCBTSS------------------------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTE
T ss_pred cCcEEEEcCcCCCCC------------------------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCc
Confidence 357899999986531 248999999999999999976 6899999999999999999
Q ss_pred ee-eeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCC----CCCcceEEEEccC
Q 016030 90 YV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPT 146 (396)
Q Consensus 90 ~v-~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~----~~~~~~il~y~~~ 146 (396)
++ +|...|++.|.||||+||++++++ +| .|.+.-........ ...-.++|+|.+.
T Consensus 218 ~~~~p~~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 218 PLDKPIKGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEEEEEESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred ccCCCccccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 98 799999999999999999999987 43 77665543322111 1123578888654
No 43
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.39 E-value=8e-13 Score=127.10 Aligned_cols=109 Identities=16% Similarity=0.047 Sum_probs=81.2
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEE-EEEeCceeEEEEeCCc
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN-LAVKNHKMVVVEADGN 89 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~-~sId~h~l~VIa~DG~ 89 (396)
.+.+||||+....|.. +.++|++|+|||| +|+++.+.+. +.|++|.++||+ ||.
T Consensus 209 ~~~~liNG~~~~~~~~----------------------~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~ 263 (336)
T 1oe1_A 209 PSHIVFNGKVGALTGA----------------------NALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGK 263 (336)
T ss_dssp CSEEEETTSTTTTSGG----------------------GCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCC
T ss_pred CCEEEECCeeccCCCC----------------------cceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCc
Confidence 3689999999865310 3589999998765 6666666555 456999999998 999
Q ss_pred eeeee--EeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccCC
Q 016030 90 YVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 147 (396)
Q Consensus 90 ~v~P~--~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~~ 147 (396)
+++|. .++.+.|++||||||+|++++ +| .|+++....... ......++|+|.+..
T Consensus 264 ~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~-~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 264 FANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEA-FELGAAGHIKVEGKW 320 (336)
T ss_dssp TTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHH-HTTSCEEEEEEESCC
T ss_pred CcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhcc-ccCCCeEEEEECCCC
Confidence 99764 468999999999999999998 44 999987543210 012356889996543
No 44
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.31 E-value=7e-12 Score=120.34 Aligned_cols=109 Identities=13% Similarity=0.028 Sum_probs=81.0
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 90 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~ 90 (396)
.+.+||||+...... .+.++|++|+|||||++|++....+.+ |++|.++||+ ||.+
T Consensus 209 ~~~~~ING~~~~~~~----------------------~~~l~v~~Ger~Rl~n~~~~~~~~~h~-i~~h~~~Vi~-dG~~ 264 (333)
T 1mzy_A 209 PSHIVFNGAVGALTG----------------------EGALKAKVGDNVLFVHSQPNRDSRPHL-IGGHGDLVWE-TGKF 264 (333)
T ss_dssp CSEEEETTSTTTTSG----------------------GGCEEEETTCEEEEEEEESSSCBCEEE-ETCCEEEEET-TCCT
T ss_pred CcEEEECCcccccCC----------------------CcceEecCCCEEEEEECCCCCccccEE-ECCCCeEEEe-CCcc
Confidence 468999999753100 135899999999888877765555554 8999999999 9999
Q ss_pred ee-ee-EeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccC
Q 016030 91 VQ-PF-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 146 (396)
Q Consensus 91 v~-P~-~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~ 146 (396)
++ |. .++++.|.+|||+||++++++ +| +|++........ ......++|+|.+.
T Consensus 265 ~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~-~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 265 HNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEA-VHKGATAHVLVEGE 319 (333)
T ss_dssp TSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHH-HTTCCEEEEEEESC
T ss_pred cCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhH-hhCCCEEEEEEcCC
Confidence 96 44 489999999999999999997 44 999986543221 01234588999643
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.27 E-value=1.7e-11 Score=118.01 Aligned_cols=109 Identities=12% Similarity=-0.004 Sum_probs=78.7
Q ss_pred CceEEEccCCCCCCccccccCCCCcccccccCCCCCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce
Q 016030 11 HYVGLVSHRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 90 (396)
Q Consensus 11 ~~s~LiNG~g~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~ 90 (396)
.+.+||||+...... .+.++|++|+||||+++|++....+.+ +++|.++||+ ||.+
T Consensus 215 ~~~~~iNG~~~~~~~----------------------~~~l~v~~G~r~Rl~n~~~~~~~~~~~-i~gh~~~Vi~-dG~~ 270 (340)
T 2bw4_A 215 PTHIVFNGAVGALTG----------------------DHALTAAVGERVLVVHSQANRDTRPHL-IGGHGDYVWA-TGKF 270 (340)
T ss_dssp CSEEEETTSTTTTSG----------------------GGCEEEETTCEEEEEEEESSSCBCEEE-ETCCEEEEET-TCCT
T ss_pred CCEEEECCccCCccC----------------------CCceEcCCCCEEEEEECCCCCccceEE-ecCcceEEeC-CCcc
Confidence 368999999863210 146899999988877666554444433 8999999997 9998
Q ss_pred ee-ee-EeceEEecCCceEEEEEeeCCCCCcceEEEEEecCCCCCCCCcceEEEEccC
Q 016030 91 VQ-PF-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 146 (396)
Q Consensus 91 v~-P~-~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~~~~~~~~~~~il~y~~~ 146 (396)
+. |. .++++.|.+||||||+|++++ +| +|+++....... ......++++|.+.
T Consensus 271 ~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h-~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 271 RNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEA-FELGAAGHFKVTGE 325 (340)
T ss_dssp TSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred cCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHH-HhCCCEEEEEECCC
Confidence 85 54 589999999999999999998 44 899987543100 01124578888654
No 46
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.19 E-value=2.3e-11 Score=101.70 Aligned_cols=93 Identities=16% Similarity=0.230 Sum_probs=70.0
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCC-CCCeeecCCceEEEe------ecCC---CCCcccccccCCCCCCccceEEeCC
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSE-IHPWHLHGHDFWVLG------RGEG---KFTKEDEKKFNLKNPPLKNTAVIFP 332 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~-~HP~HLHG~~F~Vl~------~g~g---~~~~~~~~~~n~~~p~~rDTv~vp~ 332 (396)
.+.++.|++|+|+|.|.+ .. .|.||+|+....+.. +..+ .+.+. -....++||..|.|
T Consensus 36 ~i~v~~G~~V~~~~~N~~------~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~p 103 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS------AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANG 103 (139)
T ss_dssp EEEECTTCEEEEEEECCC------SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCT
T ss_pred eEEECCCCEEEEEEEeCC------CCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCC
Confidence 578999999999999976 34 799999986532100 0000 11000 01134789999999
Q ss_pred CcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEee
Q 016030 333 YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 333 ~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
++...|.|.+++||.|.||||+..|.+ ||...+.|
T Consensus 104 Get~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 104 NETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp TCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999999999 99988865
No 47
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.17 E-value=8.2e-11 Score=93.18 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=64.9
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
..++++.|++|.|+ |.+ ...|+||+||..+... .|. +.. ....++..|.||+...++|.
T Consensus 19 ~~i~v~~Gd~V~~~--N~~------~~~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~ 77 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK------LPPHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFS 77 (105)
T ss_dssp SEEEECTTEEEEEE--ECS------SCCEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEEC
T ss_pred CEEEEcCCCEEEEE--ECC------CCCCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEe
Confidence 35789999999764 754 3589999999876431 000 000 01257889999999999999
Q ss_pred c-CCCeeeEEeecchhhhhcCcEEEEeec
Q 016030 342 A-DNPGAWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 342 a-dnpG~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
+ +.||.|.|||| .|...||...+.|.
T Consensus 78 ~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 78 SDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 8 79999999999 79999999888764
No 48
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.14 E-value=2.4e-10 Score=107.32 Aligned_cols=86 Identities=22% Similarity=0.306 Sum_probs=69.4
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.++++.|++++|.+.|.. ..+|++|+||... ...+|. +..+...|+||+..+++|++
T Consensus 67 ~i~~~~Gd~v~v~~~N~~------~~~~~iH~HG~~~---~~~DG~--------------p~~~~~~i~PG~~~~y~f~~ 123 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAG------AHPHTIHFHGVHR---ATMDGT--------------PGIGAGSIAPGQSFTYEFDA 123 (288)
T ss_dssp EEEEETTCEEEEEEEECS------SSCBCCEESSCCC---GGGSCC--------------TTSTTCSBCTTCEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEeCC------CCcccEEeccccc---cccCCC--------------CCccceeECCCCEEEEEEEc
Confidence 578999999999999964 4689999999862 111111 12245668999999999999
Q ss_pred CCCeeeEEeecch---hhhhcCcEEEEeeccc
Q 016030 343 DNPGAWAFHCHIE---PHFHIGMGVVLALGVE 371 (396)
Q Consensus 343 dnpG~w~~HCHi~---~H~~~GM~~~~~~~~~ 371 (396)
+++|.|.||||.. .|...||...+++.++
T Consensus 124 ~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~ 155 (288)
T 3gdc_A 124 TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPK 155 (288)
T ss_dssp CSCEEEEEECCCSSHHHHHHTTCEEEEEEECS
T ss_pred CCCccEEEEecCcchHHHHhCcCeEEEEEeCC
Confidence 9999999999997 7999999988887654
No 49
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.11 E-value=1.1e-10 Score=121.63 Aligned_cols=71 Identities=6% Similarity=0.070 Sum_probs=61.9
Q ss_pred eEEEEcCCCeEEEEEEecCccc-eEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 49 QILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~-~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
+.++|++|++|||||||++... .+.|+|+||.|+||+.|| ..++.+.|+||||+||++++++. | .|.+...
T Consensus 239 p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~p-G-~w~~hch 310 (647)
T 1sdd_B 239 PGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASKP-G-WWLLDTE 310 (647)
T ss_dssp CCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCSS-E-EEEEECC
T ss_pred CCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEeccc-e-EeecccC
Confidence 4589999999999999999875 899999999999999986 47899999999999999999874 3 7766543
No 50
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=98.91 E-value=7.7e-09 Score=102.82 Aligned_cols=78 Identities=13% Similarity=0.168 Sum_probs=65.9
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.| +++|.|.|.+. ...|.||+|||.|+|++...+.. ..|...|++.|.||+.+.|-+++
T Consensus 189 ~l~v~~g-~~RlRliN~~~-----~~~~~~~i~gh~~~vi~~DG~~~----------~~p~~~~~l~l~pgeR~dv~v~~ 252 (439)
T 2xu9_A 189 TLVAQKA-TLRLRLLNASN-----ARYYRLALQDHPLYLIAADGGFL----------EEPLEVSELLLAPGERAEVLVRL 252 (439)
T ss_dssp EEECSSS-EEEEEEEECCS-----SCCEEEEETTBCEEEEEETTEEE----------EEEEEESCEEECTTCEEEEEEEC
T ss_pred cEEecCC-eEEEEEEecCC-----CceEEEEECCceEEEEecCCCCC----------CCceEeceEEECCceeEEEEEEc
Confidence 4788899 99999999863 34799999999999999854432 23567899999999999999999
Q ss_pred CCCeeeEEeecchh
Q 016030 343 DNPGAWAFHCHIEP 356 (396)
Q Consensus 343 dnpG~w~~HCHi~~ 356 (396)
+++|.|.++|+-..
T Consensus 253 ~~~G~~~l~~~~~~ 266 (439)
T 2xu9_A 253 RKEGRFLLQALPYD 266 (439)
T ss_dssp CSSEEEEEEEECCC
T ss_pred CCCceEEEEecccc
Confidence 99999999998543
No 51
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.88 E-value=6.6e-09 Score=82.25 Aligned_cols=85 Identities=19% Similarity=0.196 Sum_probs=62.8
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
..+.++.|++|.|+ |.+ ...|.||+|+..+.. . .|. +... ...|++.+.||+...+.|.
T Consensus 20 ~~i~v~~Gd~V~~~--n~~------~~~H~~~~~~~~~~~-~--~g~----~~~~------~~~~~~~~~pG~~~~~~f~ 78 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK------VPPHNVVFDAALNPA-K--SAD----LAKS------LSHKQLLMSPGQSTSTTFP 78 (106)
T ss_dssp SEEEECTTCEEEEE--ECS------SSCCCBEECSSSSTT-C--CHH----HHHH------HCBCSCCCSTTCEEEEECC
T ss_pred CEEEECCCCEEEEE--ECC------CCCceEEEeCCCCcc-c--ccc----cchh------ccccceeeCCCCEEEEEEe
Confidence 35789999999886 654 358999999865421 0 000 0000 1146778899999999998
Q ss_pred c-CCCeeeEEeecchhhhhcCcEEEEeec
Q 016030 342 A-DNPGAWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 342 a-dnpG~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
+ +.||.|.|||| .|.+.||...+.|.
T Consensus 79 ~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 79 ADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 8 89999999999 89999999888764
No 52
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.85 E-value=2.2e-10 Score=108.56 Aligned_cols=68 Identities=7% Similarity=0.113 Sum_probs=44.4
Q ss_pred eEEEEcCCCeEEEEEEecCcc-ceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 49 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~-~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
+.++|++|++|||||||++.. ..+.|+|+||.|.+ || ..+|++.|.||||+||++++++ +| .|++...
T Consensus 215 p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v~~~~~~-pG-~~~~hch 283 (306)
T 1sdd_A 215 PDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTANMTVSP-EG-RWTIASL 283 (306)
T ss_dssp CCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC---------C-CCCCBCC
T ss_pred cceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEEEEEcCC-Ce-EEEEEeC
Confidence 358899999999999999987 45679999999875 88 3589999999999999999987 44 7776543
No 53
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.76 E-value=1.5e-08 Score=96.25 Aligned_cols=74 Identities=4% Similarity=0.007 Sum_probs=63.6
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCcee---eeeEeceEEecCCceEEEEEeeCCC--CCcceEE
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVLLTTNQD--PSYNYWI 123 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v---~P~~v~~l~i~~GqRyDVlv~~~~~--~~~~y~i 123 (396)
+.++++.|++|||||+|++. ....|+|.||.|+|++.||... .|..+|.+.|.||||++|+|.+.+. +| .|.+
T Consensus 174 ~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~ 251 (313)
T 3tas_A 174 PDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMY 251 (313)
T ss_dssp CCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEE
T ss_pred cccccccCCEEEEEEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEE
Confidence 56899999999999999995 4679999999999999999876 4788999999999999999988763 33 5544
Q ss_pred E
Q 016030 124 S 124 (396)
Q Consensus 124 r 124 (396)
.
T Consensus 252 H 252 (313)
T 3tas_A 252 H 252 (313)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.74 E-value=1.7e-08 Score=84.20 Aligned_cols=101 Identities=24% Similarity=0.284 Sum_probs=69.6
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCC--ceEEEeecCCCCCcccccccC---CCCCCccceEEeCCCcEEE
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH--DFWVLGRGEGKFTKEDEKKFN---LKNPPLKNTAVIFPYGWTA 337 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~--~F~Vl~~g~g~~~~~~~~~~n---~~~p~~rDTv~vp~~g~~~ 337 (396)
.++++.|++|.|++.|.+. ....|.||++.. .+.-+.. .+.....+ ..+- -....+++|..|.+|....
T Consensus 34 ~i~v~~G~tV~~~~~N~~~----~~~~H~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN----LGVQHNWVLVNGGDDVAAAVN-TAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp EEEEETTCEEEEEEEECCS----SCCCBCCEEESSSHHHHHHHH-HHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEEECCCCEEEEEEECCCC----CCCceeEEEeccCcchhhhhh-hhhhhccc-ccccCccccccccccceeeCCCceeE
Confidence 4789999999999999321 146899999853 2211000 00000000 0000 0012468899999999999
Q ss_pred EEEEcCCCeeeEEeecchhhhhcCcEEEEeec
Q 016030 338 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 338 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
+.|.++.||.|.|||++..|...||...+.|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999999999999999888764
No 55
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.67 E-value=6.4e-09 Score=109.77 Aligned_cols=70 Identities=11% Similarity=0.157 Sum_probs=60.4
Q ss_pred eEEEEcCCCeEEEEEEecCccc-eEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEE
Q 016030 49 QILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 125 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~-~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~ 125 (396)
+.++|++|++|||||||++... .+.|+|.||.|+|++.||. .+|.+.|.||||++|++++++. | .|.+..
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~p-G-~w~~hc 438 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSKA-G-IWRVEC 438 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSSC-B-CCCBCC
T ss_pred CCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCCC-C-ceEEEe
Confidence 3578999999999999998753 7899999999999999974 7899999999999999999874 3 665543
No 56
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=3.5e-08 Score=76.82 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=58.7
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|.||+|+..+- +. +... ...|++.+.||+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~------~~~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK------LSPHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECS------SCCEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECC------CCCcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 5789999999987 554 35899999875421 10 0000 125788899999888877
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||| .|...||...+.|
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 79999999999 7999999988875
No 57
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=98.62 E-value=7.4e-08 Score=89.70 Aligned_cols=75 Identities=5% Similarity=0.085 Sum_probs=63.4
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCcee----eeeEeceEEecCCceEEEEEeeCC--CCCcceE
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDIYSGESYSVLLTTNQ--DPSYNYW 122 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v----~P~~v~~l~i~~GqRyDVlv~~~~--~~~~~y~ 122 (396)
+.++++.|+++||||+|.+.. ...|+|.||.|.|++ ||... .+...|.+.|.||||+++++.+++ .+| .|+
T Consensus 168 p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~ 244 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHGEY-YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWM 244 (276)
T ss_dssp CCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEE
T ss_pred CCEEEecCCEEEEEEecCCCc-ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEE
Confidence 569999999999999999974 789999999999976 77643 246789999999999999999986 354 888
Q ss_pred EEEE
Q 016030 123 ISAG 126 (396)
Q Consensus 123 ir~~ 126 (396)
+.-.
T Consensus 245 ~HCH 248 (276)
T 3kw8_A 245 YHCH 248 (276)
T ss_dssp EEEC
T ss_pred EECC
Confidence 8754
No 58
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=98.61 E-value=3.4e-07 Score=91.21 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=62.1
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeee-cCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HL-HG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
.+.++.| +++|.|.|.+. ...|.||| |||.|+|++..++.. ..|...|++.|.+|+.+.|.++
T Consensus 194 ~~~v~~g-~~RlRliNa~~-----~~~~~~~i~dg~~~~vi~~DG~~~----------~~P~~~~~l~l~pgeR~dvlv~ 257 (451)
T 2uxt_A 194 YVEVSRG-WVRLRLLNASN-----SRRYQLQMNDGRPLHVISGDQGFL----------PAPVSVKQLSLAPGERREILVD 257 (451)
T ss_dssp EEEECSS-EEEEEEEECCS-----SCCEEEEETTSCCEEEEECSSSEE----------EEEEEESSEEECTTCEEEEEEE
T ss_pred eEEecCC-EEEEEEEccCC-----ceeEEEEECCCCeEEEEEeCCCcc----------CCceEeceEEECceeEEEEEEE
Confidence 4788899 99999999863 34799999 999999999854322 1356789999999999999999
Q ss_pred cCCCeeeEEeecchh
Q 016030 342 ADNPGAWAFHCHIEP 356 (396)
Q Consensus 342 adnpG~w~~HCHi~~ 356 (396)
++.+|.+.++++-..
T Consensus 258 ~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 258 MSNGDEVSITCGEAA 272 (451)
T ss_dssp CTTCCCEEEEC----
T ss_pred eCCCCEEEEEecCcc
Confidence 988899989988654
No 59
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.60 E-value=9.1e-08 Score=74.42 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=59.1
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.| .|.+ ...|.||+|+..+- ..++. . ..++|++.+.+|+...+.|
T Consensus 19 ~i~v~~G~~V~~--~n~~------~~~H~~~~~~~~~p------~~~~~---~------~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA------GFPHNIVFDEDAIP------SGVNA---D------AISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECS------SCCEEEEECGGGSC------TTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECC------CCceEEEEeCCCCC------Ccccc---c------cccccceecCCCCEEEEEe--
Confidence 578999999988 5654 35899999975320 11110 0 1246889999999888877
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||| .|.+.||...+.|
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 58999999999 7999999988865
No 60
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.60 E-value=1e-07 Score=91.45 Aligned_cols=75 Identities=5% Similarity=0.067 Sum_probs=61.2
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceee----eeEeceEEecCCceEEEEEeeCC--CCCcceE
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQ--DPSYNYW 122 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~----P~~v~~l~i~~GqRyDVlv~~~~--~~~~~y~ 122 (396)
+.+++++|++|||||+|.+. ....|+|.||.|+|+ .||.+.. +...|.+.|.||||++|++++++ .+| .|+
T Consensus 209 ~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~ 285 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWM 285 (343)
T ss_dssp CCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEE
T ss_pred ccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEE
Confidence 46999999999999999997 578999999999997 4776543 45679999999999999999864 243 666
Q ss_pred EEEE
Q 016030 123 ISAG 126 (396)
Q Consensus 123 ir~~ 126 (396)
+.-.
T Consensus 286 ~HCH 289 (343)
T 3cg8_A 286 YHCH 289 (343)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 6543
No 61
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.60 E-value=7.1e-07 Score=90.09 Aligned_cols=224 Identities=11% Similarity=0.103 Sum_probs=130.0
Q ss_pred ceEEEEcCCCeEEEEEEecCcc----ceEEEEEeCceeE-EEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceE
Q 016030 48 PQILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 122 (396)
Q Consensus 48 ~~~~~v~~G~~yRlRlINa~~~----~~~~~sId~h~l~-VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ 122 (396)
.++|+++.|+++++++.|--.. ....++.-|-... --..||.+- +..-.|.|||.+..-++..+.+| +||
T Consensus 33 GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~----vtq~~I~PG~~~~Y~f~~~~~~G-T~w 107 (503)
T 1hfu_A 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADG----VNQCPISPGHAFLYKFTPAGHAG-TFW 107 (503)
T ss_dssp SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEECCTTCCE-EEE
T ss_pred CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcc----cccCCcCCCCeEEEEEEeCCCCc-cEE
Confidence 3789999999999999999862 4455555554321 124788862 12335899999998888544454 999
Q ss_pred EEEEecCCCCCCCCc-ceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc
Q 016030 123 ISAGVRGRKPATPPA-LTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI 201 (396)
Q Consensus 123 ir~~~~~~~~~~~~~-~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (396)
-...... +...+ .+.|...... . +. + ..+ +.+. .+....+.+-. ........ ..
T Consensus 108 YH~H~~~---q~~~Gl~G~liV~~~~-~--~~---~--~~~-~~d~-~e~~l~l~Dw~--~~~~~~~~-~~--------- 162 (503)
T 1hfu_A 108 YHSHFGT---QYCDGLRGPMVIYDDN-D--PH---A--ALY-DEDD-ENTIITLADWY--HIPAPSIQ-GA--------- 162 (503)
T ss_dssp EEECSTT---GGGGTCEEEEEEECTT-C--TT---G--GGC-SBCS-TTSEEEEEEEC--SSCGGGCC------------
T ss_pred EEecchh---hhhCcceeeEEEcCCC-C--Cc---c--cCC-CCCC-ceEEEEEcccc--cCChHHhc-CC---------
Confidence 9876532 21111 2233322211 0 00 0 000 0000 00000000000 00000000 00
Q ss_pred CCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCC
Q 016030 202 NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA 281 (396)
Q Consensus 202 ~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~ 281 (396)
.......|||+...... + ......+.++.|++++|.|.|.+.
T Consensus 163 ~~~d~~liNG~~~~~~~-~-------------------------------------~~~~~~~~v~~g~~~RlRliN~~~ 204 (503)
T 1hfu_A 163 AQPDATLINGKGRYVGG-P-------------------------------------AAELSIVNVEQGKKYRMRLISLSC 204 (503)
T ss_dssp -CCSEEEETTBCCBTTC-C-------------------------------------CCCCCEEEECTTCEEEEEEEECCS
T ss_pred CCCCEEEECcccccCCC-C-------------------------------------CCcceEEEEcCCCEEEEEEEecCC
Confidence 00113567776532100 0 001135788999999999999863
Q ss_pred CCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCC-CeeeEEeecch
Q 016030 282 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 355 (396)
Q Consensus 282 ~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHi~ 355 (396)
...|.||++||.|+|++...+.. .|...|++.|.+|+.+.|.++++. +|.|.++++..
T Consensus 205 -----~~~~~~~i~gh~~~vi~~DG~~~-----------~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 205 -----DPNWQFSIDGHELTIIEVDGELT-----------EPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp -----SCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred -----cccEEEEEcCceEEEEeccCccc-----------cccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 34799999999999999854322 356789999999999999999876 69898999854
No 62
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.58 E-value=7.7e-07 Score=90.20 Aligned_cols=233 Identities=12% Similarity=0.101 Sum_probs=131.7
Q ss_pred CCCceEEEEcCCCeEEEEEEecCcc----ceEEEEEeCceeE-EEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCc
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 119 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~----~~~~~sId~h~l~-VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~ 119 (396)
+...++|+++.|+++++++.|-... ....++.-|-... --..||.+- +..-.|.|||.+..-+...+..|
T Consensus 51 ~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~~Y~f~~~~~~G- 125 (521)
T 1v10_A 51 TTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFVYDFVVPGQAG- 125 (521)
T ss_dssp SSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEEEEEECTTCCE-
T ss_pred ccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCCCCeEEEEEecCCCCc-
Confidence 3344789999999999999999862 4455555554321 123788762 12345789999998888544454
Q ss_pred ceEEEEEecCCCCCCCCc-ceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeecc
Q 016030 120 NYWISAGVRGRKPATPPA-LTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ 198 (396)
Q Consensus 120 ~y~ir~~~~~~~~~~~~~-~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (396)
+||-...... +...+ .+.|...... . +. + ..+ +.+. .+....+.+-.. ... ..+.. ...
T Consensus 126 T~wYH~H~~~---q~~~Gl~G~liV~~~~-~--~~---~--~~~-~~d~-~e~~l~l~D~~~--~~~----~~~~~-~~~ 185 (521)
T 1v10_A 126 TYWYHSHLST---QYCDGLRGAFVVYDPN-D--PH---L--SLY-DVDD-ASTVITIADWYH--SLS----TVLFP-NPN 185 (521)
T ss_dssp EEEEEECSTT---GGGGTCEEEEEEECTT-C--TT---G--GGC-SBCS-GGGEEEEEEECS--SCC----C--------
T ss_pred cEEEEeccCC---chhcCceEEEEEcCCc-c--cc---c--ccC-CCCC-ceeEEEEccccc--CCH----HHHhh-ccC
Confidence 9998876532 21111 2223222211 0 00 0 000 0000 000000000000 000 00000 000
Q ss_pred cccCCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEec
Q 016030 199 NTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 278 (396)
Q Consensus 199 ~~~~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N 278 (396)
..........|||+.+..... .......+.++.|++++|.|.|
T Consensus 186 ~~~~~~d~~liNG~~~~~~~~-------------------------------------~~~~~~~~~v~~G~~~RlRliN 228 (521)
T 1v10_A 186 KAPPAPDTTLINGLGRNSANP-------------------------------------SAGQLAVVSVQSGKRYRFRIVS 228 (521)
T ss_dssp CCCSCCSEEEETTBCCCSSCG-------------------------------------GGSCCCEEEECTTCEEEEEEEE
T ss_pred CCCCCCCEEEECCcccCCCCC-------------------------------------CCCCceEEEECCCCEEEEEEEe
Confidence 000001235677765321000 0001135788999999999999
Q ss_pred CCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCC-CeeeEEeecch
Q 016030 279 ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 355 (396)
Q Consensus 279 ~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adn-pG~w~~HCHi~ 355 (396)
.+. ...|.||++||.|+|++...+.. .|...|++.|.+|+...|-++++. +|.|.++|+..
T Consensus 229 a~~-----~~~~~~~i~gh~~~vi~~DG~~~-----------~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 229 TSC-----FPNYAFSIDGHRMTVIEVDGVSH-----------QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp CCS-----SCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred cCC-----cccEEEEECCCeEEEEecCCccc-----------cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 863 34799999999999999854322 356789999999999999999876 69999999865
No 63
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.56 E-value=1.5e-07 Score=88.65 Aligned_cols=77 Identities=8% Similarity=0.091 Sum_probs=63.6
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceee---eeEeceEEecCCceEEEEEeeCCC--CCcce
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---PFEVDDMDIYSGESYSVLLTTNQD--PSYNY 121 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~---P~~v~~l~i~~GqRyDVlv~~~~~--~~~~y 121 (396)
..+.++++.|+++||||||++.. ...|.|.||.|+|++.|+.... +..+|.+.|.||||++++|.+.+. +| .|
T Consensus 188 ~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w 265 (299)
T 3t9w_A 188 DAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MW 265 (299)
T ss_dssp CCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EE
T ss_pred ccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eE
Confidence 34679999999999999999975 4689999999999999988763 456899999999999999987653 43 66
Q ss_pred EEEE
Q 016030 122 WISA 125 (396)
Q Consensus 122 ~ir~ 125 (396)
.+.-
T Consensus 266 ~~HC 269 (299)
T 3t9w_A 266 MYHC 269 (299)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5543
No 64
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.53 E-value=3e-07 Score=70.34 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=56.0
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|.+|+|+. .. ...++..+.+|+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~------~~~H~v~~~~~---------~~--------------~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK------LAPHNVVVEGQ---------PE--------------LSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECS------SCCEEEEETTC---------GG--------------GCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECC------CCCcEEEEeCC---------Cc--------------cCcccceeCCCCEEEEEe--
Confidence 5789999999886 543 35899999872 01 125677888998887777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||| .|...||...+.|
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 89999999999 8999999988765
No 65
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.52 E-value=1.4e-06 Score=87.68 Aligned_cols=226 Identities=11% Similarity=0.117 Sum_probs=129.9
Q ss_pred CceEEEEcCCCeEEEEEEecCcc----ceEEEEEeCceeE-EEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcce
Q 016030 47 APQILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNY 121 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~----~~~~~sId~h~l~-VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y 121 (396)
..++|+++.|+++++++.|-... ....++.-|-.+. --.+||.+- +..-.|.||+.+..-+.+.+..| +|
T Consensus 32 PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~s~tY~f~~~~~~G-T~ 106 (499)
T 3pxl_A 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISPGHSFLYDFQVPDQAG-TF 106 (499)
T ss_dssp SCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECSSCCE-EE
T ss_pred cCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEcCCCCc-ee
Confidence 34789999999999999998764 3445555554321 135788752 22346899999999998855454 99
Q ss_pred EEEEEecCCCCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc
Q 016030 122 WISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI 201 (396)
Q Consensus 122 ~ir~~~~~~~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (396)
|-.............+ +++-+.... +.. ...+.++. +....+.+-......... .. .
T Consensus 107 wYHsH~~~q~~~GL~G-~lIV~~~~~----~~~---~~~~~d~~----~~~l~l~Dw~~~~~~~~~--------~~---p 163 (499)
T 3pxl_A 107 WYHSHLSTQYCDGLRG-PFVVYDPND----PHA---SRYDVDND----DTVITLADWYHTAAKLGP--------RF---P 163 (499)
T ss_dssp EEEECSTTGGGGTCEE-EEEEECTTC----TTG---GGCSBCSG----GGEEEEEEECSSCTTTSC--------SS---C
T ss_pred eeeccchhHHhcccee-EEEEcCCcc----ccc---ccCCCCCc----eEEEEEEcccCCcccccc--------CC---C
Confidence 9887653211111111 333332111 100 00000000 000000000000000000 00 0
Q ss_pred CCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCC
Q 016030 202 NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA 281 (396)
Q Consensus 202 ~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~ 281 (396)
.......|||....... .......+.++.|+++.|.|.|.+.
T Consensus 164 ~~~d~~liNG~~~~~~~--------------------------------------~~~~~~~~~v~~G~~~RlRliNa~~ 205 (499)
T 3pxl_A 164 GGADATLINGKGRAPSD--------------------------------------SVAELSVIKVTKGKRYRFRLVSLSC 205 (499)
T ss_dssp SSCSEEEETTBCCCTTC--------------------------------------TTCCCCEEEECTTCEEEEEEEECCS
T ss_pred CCCcEEEECCCCcCCCC--------------------------------------CCCCcceEEEcCCCEEEEEEEecCC
Confidence 00113467775321100 0001135788999999999999863
Q ss_pred CCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCC-eeeEEeecc
Q 016030 282 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 354 (396)
Q Consensus 282 ~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnp-G~w~~HCHi 354 (396)
...+-||++||.|+|++.... + ..|...|++.|.+|+...|-++++.+ |.|.++|..
T Consensus 206 -----~~~~~~~i~gh~~~via~DG~-~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 206 -----NPNHTFSIDGHNLTIIEVDSV-N----------SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp -----SCCEEEEETTBCEEEEEETTE-E----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred -----CeeEEEEECCCeEEEEEECCc-c----------cCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 357899999999999998432 2 23667899999999999999999875 888888864
No 66
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.47 E-value=1.2e-07 Score=73.72 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=57.5
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|.+++++..+. .+ ... ...++..+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~------~~~H~~~~~~~~~~-----~~------~~~------~~~~~~~~~~g~~~~~tf-- 72 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK------VGPHNVIFDKVPAG-----ES------APA------LSNTKLAIAPGSFYSVTL-- 72 (97)
T ss_dssp EEEECTTCEEEEE--ECS------SCCCCBEEEECCTT-----SC------HHH------HCBCCCCCSCSCCEEEEC--
T ss_pred EEEECCCCEEEEE--ECC------CCCeEEEEeCCCCc-----cc------ccc------ccccceecCCCCEEEEEe--
Confidence 5789999998886 654 35899999876541 00 000 114667788888888877
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||+ .|.+.||...+.|
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 89999999999 8999999988765
No 67
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.45 E-value=3.3e-06 Score=84.86 Aligned_cols=228 Identities=11% Similarity=0.106 Sum_probs=130.1
Q ss_pred CceEEEEcCCCeEEEEEEecCcc----ceEEEEEeCceeE-EEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcce
Q 016030 47 APQILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNY 121 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~----~~~~~sId~h~l~-VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y 121 (396)
..++|+++.|++.++++.|-... ....++.-|-... --.+||.+- +..-.|.||+.+..-+.+.+..| +|
T Consensus 33 PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f~~~~~~G-T~ 107 (495)
T 3t6v_A 33 PGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNFNVPGMAG-TY 107 (495)
T ss_dssp SCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECTTCCE-EE
T ss_pred cCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEeCCCCc-ee
Confidence 34799999999999999998764 2345555554321 125788752 22346899999999999855454 99
Q ss_pred EEEEEecCCCCCCCCcceEEEEccCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEeeccccc
Q 016030 122 WISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI 201 (396)
Q Consensus 122 ~ir~~~~~~~~~~~~~~~il~y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (396)
|-.............+ +++-+.... +... ..+.++.. ....+.+-.... ..... .. ..
T Consensus 108 wYHsH~~~q~~~GL~G-~lIV~~~~~----~~~~---~~~~d~~e----~~l~l~Dw~~~~--~~~~~------~~--~p 165 (495)
T 3t6v_A 108 WYHSHLTTQYCDGLRG-PFVVYDPND----PDAN---LYDVDDDT----TIITLADWYHVL--AKEMG------AG--GA 165 (495)
T ss_dssp EEEECSTTGGGGTCEE-EEEEECTTC----TTGG---GCSBCSGG----GEEEEEEECSSC--GGGSC------SS--SC
T ss_pred eeeccchhHHhcCceE-EEEEcCccc----cccc---cCCCCCce----eEEEEecccCCc--hhhhc------cC--CC
Confidence 9887653211111111 333332111 1000 00000000 000000000000 00000 00 00
Q ss_pred CCeEEEEEcCccCcCCCCCchhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccceEEeecCCEEEEEEecCCC
Q 016030 202 NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA 281 (396)
Q Consensus 202 ~g~~~~~iN~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vi~N~~~ 281 (396)
.......|||+..... .| .......+.++.|++++|.|.|.+.
T Consensus 166 ~~~d~~liNG~g~~~~-~~------------------------------------~~~~~~~~~v~~G~~~RlRliN~~~ 208 (495)
T 3t6v_A 166 ITADSTLIDGLGRTHV-NV------------------------------------AAVPLSVITVEVGKRYRMRLVSISC 208 (495)
T ss_dssp CCCSEEEETTBCCBSS-SC------------------------------------CCCCCCEEEECTTCEEEEEEEECCS
T ss_pred CCCcEEEECCcCcCCC-Cc------------------------------------ccCCceEEEEcCCCEEEEEEEecCC
Confidence 0011346776532110 00 0001135788999999999999763
Q ss_pred CCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcCCC-eeeEEeecc
Q 016030 282 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 354 (396)
Q Consensus 282 ~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~adnp-G~w~~HCHi 354 (396)
...+.||++||.|+|++.... + ..|...|++.|.+|+.+.|-++++.+ |.|.++|..
T Consensus 209 -----~~~~~~~i~gh~~~via~DG~-~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 209 -----DPNYDFSIDGHDMTIIETDGV-D----------SQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp -----SCCEEEEETTCCEEEEEETTE-E----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred -----CeeEEEEECCCeEEEEEeCCc-c----------cCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 357899999999999998532 2 23667899999999999999999876 888899874
No 68
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.39 E-value=1.4e-06 Score=69.52 Aligned_cols=72 Identities=18% Similarity=0.306 Sum_probs=54.6
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|+.|.|++.|.+ ...|-|++... .-+..+.||+...+.|.+
T Consensus 39 ~i~v~~G~~V~~~~~n~d------~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS------PISEGFSIDAF---------------------------GVQEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECS------SSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEECC------CCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEEC
Confidence 578999999999999975 22344333321 114568999999999999
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.||||+.-|... |...+.+
T Consensus 86 ~~~G~y~~~C~~~~~~~~-M~g~i~V 110 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIH-LPGTLNV 110 (112)
T ss_dssp CSCEEEEEBCSSSCTTTB-CCEEEEE
T ss_pred CCCEEEEEECCCCCchHH-CEEEEEE
Confidence 999999999999877544 8776655
No 69
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.34 E-value=5.5e-06 Score=84.59 Aligned_cols=90 Identities=23% Similarity=0.223 Sum_probs=66.7
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.++++.|+++++.+.|.-. ...+.+|+||.... +. .|. |. .+---.-.|+||+..+.+|++
T Consensus 35 ~I~~~~GD~v~v~v~N~l~-----~~~tsiHwHGl~~~--~~---~~~--DG-------v~~vtq~~I~PG~s~tY~f~~ 95 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLH-----TEGVVIHWHGILQR--GT---PWA--DG-------TASISQCAINPGETFFYNFTV 95 (552)
T ss_dssp CEEEETTCEEEEEEEECCS-----SCCBCEEEETCCCT--TC---GGG--SC-------CBTTTBCCBCTTCEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEeCCC-----CCCeeEEeCCCccC--CC---ccc--CC-------CcccccCCcCCCCeEEEEEEC
Confidence 4788999999999999631 25899999997642 11 010 00 000011237899999999999
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEeeccc
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 371 (396)
+.+|.|.||||...+...||...|++.++
T Consensus 96 ~~~GT~wYHsH~~~q~~~Gl~G~liV~~~ 124 (552)
T 1aoz_A 96 DNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124 (552)
T ss_dssp CSCEEEEEEECSTTTGGGTCEEEEEEECC
T ss_pred CCCEEEEEEECchhHHhccCeeeEEEeCC
Confidence 99999999999999999999887776543
No 70
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.34 E-value=1.8e-06 Score=67.12 Aligned_cols=81 Identities=12% Similarity=0.129 Sum_probs=58.3
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.| .|.+ ...|.+|+++..|- ..++.. .. ...+|++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~------~~~H~~~~~~~~~p------~g~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA------GFPHNDLFDKKEVP------AGVDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECS------SCCBCCEECTTSSC------TTCCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECC------CCcceEEEeCCCCc------cccccc-cc------cccccceeeCCCCEEEEEe--
Confidence 578899999887 5654 35899999986541 011100 00 1125667788998888877
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||+ .|.++||...+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 59999999999 7999999988865
No 71
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.26 E-value=4.4e-06 Score=65.11 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=56.5
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|+.|.|++.|.+ ...|-|.+.+..+ ...+.||....+.|.+
T Consensus 29 ~i~v~~G~tV~~~~~n~d------~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG------KSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKP 75 (100)
T ss_dssp EEEECTTSCEEEEEEECS------SSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECC
T ss_pred EEEECCCCEEEEEEEcCC------CceEEEEEecCCc---------------------------ceeecCCcceeEEEec
Confidence 578999999999999976 3467666544332 1246778888999999
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|+|. .|...||...+.|
T Consensus 76 ~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 76 KSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCceEEEECc--cccCCCCEEEEEE
Confidence 99999999997 5999999887765
No 72
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.24 E-value=2.3e-06 Score=66.88 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=57.0
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCc-cceEEeCCCcEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL-KNTAVIFPYGWTALRF 340 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~-rDTv~vp~~g~~~irf 340 (396)
..+.++.|++|.|+ |.+ ...|.++++.-... .+.+. +... .+.+ .+++.+.+|+...+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~------~~~H~~~~~~~~~~-----~~~~~--~~~~----~~~~~~~~~~~~pG~~~~~tf 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG------ETGHNIVFDIPAGA-----PGTVA--SELK----AASMDENDLLSEDEPSFKAKV 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS------SSCBCCEECCCTTC-----CHHHH--HHHH----HTSCCTTCCBBTTBCEEEECC
T ss_pred CEEEECCCCEEEEE--ECC------CCCeEEEEeCcccc-----ccccc--chhh----cccccccceecCCCCEEEEEe
Confidence 35789999999886 654 35899998731100 00000 0000 0122 4677788888888877
Q ss_pred EcCCCeeeEEeecchhhhhcCcEEEEee
Q 016030 341 VADNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 341 ~adnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||+ .|.+.||...+.|
T Consensus 78 --~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 --STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp --CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred --CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999988865
No 73
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.07 E-value=1.3e-05 Score=81.96 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=66.7
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCC-CcEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP-YGWTALRF 340 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~~irf 340 (396)
+.++++.|+++++.+.|.- ....+-+|+||....--...+|.. ---.-.|+| |+..+.+|
T Consensus 67 P~i~~~~GD~v~v~v~N~l-----~~~~tsiHwHG~~~~~~~~~DG~~--------------~~tq~~I~P~G~~~~Y~f 127 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNL-----VTNGTSIHWHGIXQKDTNLHDGAN--------------GVTECPIPPKGGQRTYRW 127 (559)
T ss_dssp CCEEEETTCEEEEEEEEEC-----SSCCBCEEEETCCCTTCGGGSCCB--------------TTTBCCBCTTTEEEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCC-----CCCCceEEcCCCccCCCCCcCCCC--------------ccccCccCCCCCeEEEEE
Confidence 4689999999999999953 134799999998642000001111 000123789 99999999
Q ss_pred EcCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 341 VADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 341 ~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+++.+|.|.||||...|...||...|++.+
T Consensus 128 ~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~ 157 (559)
T 2q9o_A 128 RARQYGTSWYHSHFSAQYGNGVVGTIQING 157 (559)
T ss_dssp ECCSCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred ECCCCEEEEEEEcccchhcCCceEEEEecC
Confidence 999999999999999999999998877654
No 74
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.04 E-value=9.1e-06 Score=63.07 Aligned_cols=81 Identities=14% Similarity=0.168 Sum_probs=56.8
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.| .|.+ ...|.++++...+- .+ .+.. .. ...++.+.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~------~~~H~v~~~~~~~p-----~~-~~~~-~~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA------GFPHNIVFDEDSIP-----SG-VDAS-KI------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECS------SCCBCCEECTTSSC-----TT-CCHH-HH------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECC------CCceEEEEeCCCCc-----cc-cccc-cc------ccccCccccCCCCEEEEEE--
Confidence 578999999988 5654 35899998875431 00 1000 00 0124556788888887777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.|.|||+ .|..+||...+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 59999999999 7999999988765
No 75
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.94 E-value=2.9e-05 Score=65.49 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=57.9
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccc-------eEEeCCCc
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN-------TAVIFPYG 334 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rD-------Tv~vp~~g 334 (396)
+.++++.|++|.+++.|.+ ....|=|-++ ..+. .+.. . |...+ +..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~-----~~~~H~~~i~-------~~~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN-----KGFGHSFDIT-------KKGP-PYAV-----M----PVIDPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp CEEEECTTCEEEEEEEECC-----TTCCCCCEEE-------SCCS-CCCS-----S----CCCCSEEEEBCCCCCCBTTB
T ss_pred CEEEEeCCCEEEEEEEcCC-----CCeeeEEEEe-------ecCc-chhc-----c----ccccccccccccccccCCCC
Confidence 4689999999999999963 1234544444 1111 1100 0 00111 12567888
Q ss_pred --EEEEEEEcCCCeeeEEeecchhhhhcCcEEEEee
Q 016030 335 --WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 335 --~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
...+.|++ .||.+.||||+--|...||-..+.|
T Consensus 119 sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 119 FGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 89999999 9999999999999999999987765
No 76
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=97.92 E-value=4.3e-05 Score=77.97 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=66.0
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.++++.|+++++.+.|.- ....+-+|+||....--...+|.. .----.|+||+..+.+|+
T Consensus 98 P~I~~~~GD~v~V~v~N~l-----~~~~tsIHwHGl~~~~t~~~DGvp--------------~vTq~pI~PG~sftY~f~ 158 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNL-----EHNGTSIHWHGIRQLGSLEYDGVP--------------GVTQCPIAPGDTLTYKFQ 158 (580)
T ss_dssp CCEEEETTCEEEEEEEECC-----SSCCBCEEETTCCCTTCGGGSCCB--------------TTTBCCBCTTCEEEEEEE
T ss_pred ceEEEeCCCEEEEEEEECC-----CCCcceEEecccccCCCccccCCC--------------ccccCCCCCCCeEEEEEE
Confidence 4689999999999999953 124789999998542000011110 000113899999999999
Q ss_pred cCCCeeeEEeecchhhhhcCcEEEEeec
Q 016030 342 ADNPGAWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 342 adnpG~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
++.+|.+.||||...+...||...|++.
T Consensus 159 ~~q~GT~WYHsH~~~q~~~GL~G~lIV~ 186 (580)
T 3sqr_A 159 VTQYGTTWYHSHFSLQYGDGLFGPLIIN 186 (580)
T ss_dssp CCCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred CCCCcceEEeecccccccCcCEEEEEee
Confidence 9999999999999999999998777665
No 77
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=97.91 E-value=4.1e-05 Score=77.69 Aligned_cols=91 Identities=19% Similarity=0.215 Sum_probs=67.6
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.++++.|+.+++.+.|.- ....+-+|+||.....-...+|.. .----.|+||+..+.+|+
T Consensus 34 P~i~~~~Gd~v~v~v~N~l-----~~~~tsiHwHG~~~~~~~~~DG~~--------------~vtq~pI~PG~~~~Y~f~ 94 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGM-----NNTNTSMHFHGLFQNGTASMDGVP--------------FLTQCPIAPGSTMLYNFT 94 (534)
T ss_dssp CCEEEETTCEEEEEEECCC-----SSCCBCCEEETCCCTTCGGGSCCB--------------TTTBCCBCTTCEEEEEEE
T ss_pred ccEEEECCCEEEEEEEeCC-----CCCCeeEEcCCcccCCCCcccCCC--------------ccccCCcCCCCeEEEEEE
Confidence 4689999999999999953 126899999998652111111110 000113889999999999
Q ss_pred cC-CCeeeEEeecchhhhhcCcEEEEeeccc
Q 016030 342 AD-NPGAWAFHCHIEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 342 ad-npG~w~~HCHi~~H~~~GM~~~~~~~~~ 371 (396)
++ .+|.+.||||...|...||...|++.++
T Consensus 95 ~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 125 (534)
T 1zpu_A 95 VDYNVGTYWYHSHTDGQYEDGMKGLFIIKDD 125 (534)
T ss_dssp CSSCCEEEEEECCSSSGGGGTCEEEEEEECT
T ss_pred eCccceeEEEEEcCcccccCcceeeEEeCCC
Confidence 88 9999999999999999999988877654
No 78
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.88 E-value=5.1e-05 Score=77.12 Aligned_cols=78 Identities=22% Similarity=0.290 Sum_probs=61.5
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
..++++.|+.|+|++.|.+.. .+..|.|+++++.+. ..+.||....+.|+
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Ft 562 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFV 562 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEE
Confidence 467899999999999996421 135799998876432 34778899999999
Q ss_pred cCCCeeeEEeec---chhhhhcCcEEEEeeccc
Q 016030 342 ADNPGAWAFHCH---IEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 342 adnpG~w~~HCH---i~~H~~~GM~~~~~~~~~ 371 (396)
++.||.|.|||| ...|. ||...+.|.++
T Consensus 563 a~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 563 AANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CCSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 999999999999 45675 99988877653
No 79
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=97.78 E-value=3.9e-05 Score=76.16 Aligned_cols=85 Identities=22% Similarity=0.276 Sum_probs=66.7
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.++++.|+.+++.+.|.- ...+-+|+||...- ...+|. |. -.|+||+..+.+|+
T Consensus 38 P~i~~~~Gd~v~v~~~N~l------~~~tsiHwHG~~~~--~~~DG~-------------~~----~~i~PG~~~~Y~f~ 92 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKL------TEPTIVHWHGFDVN--WHNDAH-------------PS----FAITPGESYNYSFD 92 (448)
T ss_dssp CEEEEETTCEEEEEEEECS------SSCBCEEEETCCCC--HHHHTC-------------GG----GCBCTTCEEEEEEE
T ss_pred ceEEEeCCCEEEEEEEECC------CCceeEEeCCccCC--CccCCC-------------CC----ccCCCCCEEEEEEE
Confidence 4689999999999999953 46899999998642 111111 11 34889999999999
Q ss_pred cC-CCeeeEEeec----chhhhhcCcEEEEeeccc
Q 016030 342 AD-NPGAWAFHCH----IEPHFHIGMGVVLALGVE 371 (396)
Q Consensus 342 ad-npG~w~~HCH----i~~H~~~GM~~~~~~~~~ 371 (396)
++ .+|.|.|||| ...+...||...|++.++
T Consensus 93 ~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~ 127 (448)
T 3aw5_A 93 VVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDS 127 (448)
T ss_dssp CCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECT
T ss_pred cCCCCCceEeccCCCCchHHHHhccceEEEEEeCC
Confidence 88 7999999999 889999999887776543
No 80
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=97.77 E-value=0.00011 Score=73.55 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=65.6
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.++++.|+.+++.+.|.- +.++-+|+||...- ...+|. | --.|+||+..+.+|+
T Consensus 82 PtIr~~~Gd~v~v~v~N~l------~~~tsiHwHGl~~~--~~~DG~-------------p----q~~I~PG~s~~Y~f~ 136 (481)
T 3zx1_A 82 PKIEVFEGDKLEILVKNKL------KEATTIHWHGVPVP--PDQDGS-------------P----HDPILAGEERIYRFE 136 (481)
T ss_dssp CBEEEETTCEEEEEEEECS------SSCBCCEEETCCCC--GGGSCC-------------T----TSCBCTTCEEEEEEE
T ss_pred ceEEEECCcEEEEEEEeCC------CCCeeEEecCcccC--CccCCC-------------c----cCcCCCCCeEEEEEe
Confidence 4689999999999999953 46899999999631 111111 1 124789999999999
Q ss_pred cCC--CeeeEEeecc----hhhhhcCcEEEEeeccc
Q 016030 342 ADN--PGAWAFHCHI----EPHFHIGMGVVLALGVE 371 (396)
Q Consensus 342 adn--pG~w~~HCHi----~~H~~~GM~~~~~~~~~ 371 (396)
++. +|.|.||||. ..|...||...+++.++
T Consensus 137 ~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~ 172 (481)
T 3zx1_A 137 IPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAK 172 (481)
T ss_dssp CCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECS
T ss_pred CCCCCCceEEEeecCCCcchhhhhccceEEEEEcCc
Confidence 876 7999999997 67899999877776543
No 81
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=97.76 E-value=5.3e-05 Score=75.77 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=59.1
Q ss_pred EEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeee---eEeceEEecCCceEEEEEeeCCCC
Q 016030 50 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQDP 117 (396)
Q Consensus 50 ~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P---~~v~~l~i~~GqRyDVlv~~~~~~ 117 (396)
.++++.|+++||+|+|.+......|+|.+|.|+|++.||..+.| ...|.+.|. ||+..|++.++..+
T Consensus 393 ~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~ 462 (488)
T 3od3_A 393 MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDA 462 (488)
T ss_dssp SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCC
T ss_pred ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCC
Confidence 47899999999999999866678999999999999999998754 357999999 99999999998743
No 82
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.67 E-value=0.00019 Score=56.26 Aligned_cols=71 Identities=23% Similarity=0.262 Sum_probs=49.2
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|+.|.|+ |.+ ...|-+|+|+-. .|.- .+. +-.+.+|+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d------~~~H~v~~~~~~-------~g~~-------------~~~-~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE------AMPHNVHFVAGV-------LGEA-------------ALK-GPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECS------SSCBCCEECTTT-------SSSS-------------CEE-CCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECC------CCCEEEEEcCCC-------CCcc-------------ccc-ccccCCCCEEEEEe--
Confidence 5789999999885 654 357999988522 1110 011 11367788777766
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.+.|||++ |. ||...+.|
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999997 65 99877765
No 83
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=97.45 E-value=0.00023 Score=72.14 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=64.3
Q ss_pred cceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEE
Q 016030 261 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 340 (396)
Q Consensus 261 ~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf 340 (396)
.+.++++.|+.+++.+.|.- ...+-+|+||.... ...+| + + .+ .|+||+..+.+|
T Consensus 68 GPtI~~~~Gd~v~v~v~N~l------~~~tsiHwHGl~~~--~~~DG-~------------~--~~--~i~PG~~~~Y~f 122 (534)
T 3abg_A 68 GPTFQVPRGVETVVRFINNA------EAPNSVHLHGSFSR--AAFDG-W------------A--ED--ITEPGSFKDYYY 122 (534)
T ss_dssp EEEEEEETTCCEEEEEEECS------SSCBCEEEETCCCC--TTTTT-C------------S--SS--CBSSCSCCCEEE
T ss_pred CceEEEeCCcEEEEEEEECC------CCCceEEECCCcCC--CCCCC-C------------C--CC--CCCCCCeEEEEE
Confidence 36789999999999999963 46899999998531 11111 1 0 01 278999999999
Q ss_pred EcCC-CeeeEEeecchh----hhhcCcEEEEeeccc
Q 016030 341 VADN-PGAWAFHCHIEP----HFHIGMGVVLALGVE 371 (396)
Q Consensus 341 ~adn-pG~w~~HCHi~~----H~~~GM~~~~~~~~~ 371 (396)
.++. +|.+.||||... |...||...+++.++
T Consensus 123 ~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~ 158 (534)
T 3abg_A 123 PNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDP 158 (534)
T ss_dssp CCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECT
T ss_pred ecCCcceeEEEecCccccchhhhhhcceEEEEEECC
Confidence 9887 589999999964 678999887776543
No 84
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.11 E-value=0.0025 Score=48.91 Aligned_cols=79 Identities=10% Similarity=0.152 Sum_probs=51.9
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|-+.++...+ ...++ .. ....+...+.+|....+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~------~~~H~v~~~~~~~------p~g~~---~~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA------GFPHNIVFDEDAV------PAGVD---AD------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECS------SCCEEEEECTTSS------CTTCC---HH------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECC------CCCEEEEEeCCCC------ccccc---cc------cccccccccCCCCEEEEEc--
Confidence 5789999999886 544 2466655443100 00010 00 0113346788888877777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.+.|+|-+ |..+||...+.|
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 899999999986 999999887765
No 85
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.05 E-value=0.0014 Score=67.16 Aligned_cols=74 Identities=5% Similarity=0.015 Sum_probs=58.5
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce------------------------e---eeeEeceEEe
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY------------------------V---QPFEVDDMDI 101 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~------------------------v---~P~~v~~l~i 101 (396)
..+.++.|++.+|+|+|.+.. ...|+|-+|.|+|++.+|.. + ++...|.+.|
T Consensus 472 ~~~~v~~G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v 550 (612)
T 2g23_A 472 LGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQV 550 (612)
T ss_dssp CCEEEETTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEE
T ss_pred CceEecCCCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEE
Confidence 458999999999999999754 57999999999999975421 1 2235799999
Q ss_pred cCCceEEEEEeeCCCCCcceEEE
Q 016030 102 YSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 102 ~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|||++.|+++++..+| .|-+.
T Consensus 551 ~Pg~~~~i~~~~~~~pG-~w~~H 572 (612)
T 2g23_A 551 PGPQGLRVMGKFDGAYG-RFMYH 572 (612)
T ss_dssp CSSEEEEEEEECCSCCE-EEEEE
T ss_pred CCCcEEEEEEEeCCCCc-cEEEE
Confidence 99999999999985454 55443
No 86
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.04 E-value=0.0013 Score=53.38 Aligned_cols=36 Identities=22% Similarity=0.506 Sum_probs=29.5
Q ss_pred CCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 331 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 331 p~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
.|++...+.| +.||.|.|||- .|...||...+.|+.
T Consensus 61 ~pGet~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 61 KINEEITVTL--SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CTTCCCEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 4667655655 89999999999 699999998888764
No 87
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.01 E-value=0.0023 Score=51.48 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=49.7
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.++++.|++|.|++.|. .|-+..+.. .+. +. .+.+.+.|++...+.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---------~H~v~~~~~----------~~P-~g-----------~~~f~~~pg~t~s~TF-- 68 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---------SHNVEAIKE----------ILP-EG-----------VESFKSKINESYTLTV-- 68 (123)
T ss_dssp EEEECTTEEEEEEESST---------TCCCEECTT----------SSC-TT-----------CCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEEECCC---------CceEEEcCC----------cCC-CC-----------ccceecCCCCEEEEEe--
Confidence 57899999999988762 344444321 110 00 0111235677777777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+.||.|.|+|- .|...||...+.|+.
T Consensus 69 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 69 TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 89999999999 899999998888763
No 88
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=96.99 E-value=0.0011 Score=54.63 Aligned_cols=71 Identities=18% Similarity=0.279 Sum_probs=51.5
Q ss_pred CCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCC-----------------ceee----eeEeceEEecC
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG-----------------NYVQ----PFEVDDMDIYS 103 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG-----------------~~v~----P~~v~~l~i~~ 103 (396)
...+..++|++|++++|+|+|.+... .|+|.+...+. .++. ....++..|.+
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~p 103 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANG 103 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCT
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCC
Confidence 44567899999999999999998653 67777775431 2221 12345677999
Q ss_pred CceEEEEEeeCCCCCcceEEE
Q 016030 104 GESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 104 GqRyDVlv~~~~~~~~~y~ir 124 (396)
||++++.+++++ +| .|++.
T Consensus 104 Get~~v~f~~~~-pG-~y~f~ 122 (139)
T 2aan_A 104 NETVEVTFTAPA-AG-TYLYI 122 (139)
T ss_dssp TCEEEEEEECCS-SE-EEEEE
T ss_pred CCEEEEEEECCC-Ce-EEEEE
Confidence 999999999875 44 78764
No 89
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=96.96 E-value=0.0013 Score=66.42 Aligned_cols=96 Identities=14% Similarity=0.000 Sum_probs=61.2
Q ss_pred ceEEeecCCEEEEEEecCCCCC---C-------------CCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCcc
Q 016030 262 GVYMLGLNTTVDVILQNANAIR---P-------------NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLK 325 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~---~-------------~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~r 325 (396)
+.++++.|+.+++.+.|.-... + .....+-+|+||.... ...+|... +...|
T Consensus 58 PtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p~-------~~i~~--- 125 (513)
T 2wsd_A 58 PTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPE-------AWFSK--- 125 (513)
T ss_dssp CBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCTT-------SCBCG---
T ss_pred ceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCCc-------ccccC---
Confidence 5689999999999999953100 0 0012788999998632 21122110 00000
Q ss_pred ceEEeCCC---cEEEEEEEcC-CCeeeEEeecch----hhhhcCcEEEEeeccc
Q 016030 326 NTAVIFPY---GWTALRFVAD-NPGAWAFHCHIE----PHFHIGMGVVLALGVE 371 (396)
Q Consensus 326 DTv~vp~~---g~~~irf~ad-npG~w~~HCHi~----~H~~~GM~~~~~~~~~ 371 (396)
=.|+|| +..+.+|.++ .+|.+.||||.. .|...||...|++.++
T Consensus 126 --g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~ 177 (513)
T 2wsd_A 126 --DFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 177 (513)
T ss_dssp --GGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred --CcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecc
Confidence 014455 5669999976 699999999985 3788999988776543
No 90
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.90 E-value=0.0025 Score=51.36 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=49.3
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.++++.|++|.|+..+ ..|-+..+.. .+. .-.+.+.+.++....+.|
T Consensus 23 ~i~V~~GDTV~f~n~~---------~~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF-- 69 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---------KSHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA-- 69 (124)
T ss_dssp EEEECTTCEEEEECSS---------SSCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--
T ss_pred EEEECCCCEEEEEECC---------CCccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--
Confidence 5789999999998443 2565555421 110 001122345677666666
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+.||.|.|||- .|...||...+.|+.
T Consensus 70 ~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 70 EKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 89999999996 899999998888763
No 91
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.70 E-value=0.0067 Score=47.30 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=47.6
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|-+++....- |.- .+ ++-.+.+|....+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d------~~~H~v~~~~~~~-------~~~-------------~~-~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE------VMPHNVAFKKGIV-------GED-------------AF-RGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECS------SSCBCCEECTTTS-------SSS-------------CE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECC------CCcEEEEEeCCCC-------Ccc-------------cc-cccccCCCCEEEEEe--
Confidence 5789999999887 654 2467665543210 000 01 222456787777777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.+.|+|-+ |. ||...+.|
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999987 76 99887765
No 92
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.49 E-value=0.01 Score=48.31 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=48.4
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|++|.|+ |.+ ...|-+++.... .|. ..+ ++-.+.+|+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d------~~~H~v~~~~~~-------~g~-------------~~~-~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE------VMPHNVAFKKGI-------VGE-------------DAF-RGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECS------SSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECC------CCceEEEEeCCC-------CCc-------------ccc-cccccCCCCEEEEEc--
Confidence 5789999999986 654 346777664321 010 011 222467788777777
Q ss_pred CCCeeeEEeecchhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
+.||.+.|||-+ |. ||...+.|
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999987 76 99887765
No 93
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.43 E-value=0.011 Score=47.39 Aligned_cols=36 Identities=31% Similarity=0.574 Sum_probs=28.8
Q ss_pred CCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 331 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 331 p~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
.+|....+.| +.||.|.|+|- .|...||...+.|++
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4666655555 88999999997 599999999888764
No 94
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.31 E-value=0.011 Score=47.46 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=29.6
Q ss_pred eCCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 330 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 330 vp~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
+.+|....+.| +.||.|.|+|- .|...||...+.|++
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 34677655555 78999999998 599999999888764
No 95
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.31 E-value=0.0081 Score=61.71 Aligned_cols=42 Identities=12% Similarity=0.068 Sum_probs=35.2
Q ss_pred EeCCCcEEEEEEEcCCC-eeeEEeecc----hhhhhcCcEEEEeecc
Q 016030 329 VIFPYGWTALRFVADNP-GAWAFHCHI----EPHFHIGMGVVLALGV 370 (396)
Q Consensus 329 ~vp~~g~~~irf~adnp-G~w~~HCHi----~~H~~~GM~~~~~~~~ 370 (396)
.|+||+..+.+|.++.+ |.+-||+|. ..+...||...|++.+
T Consensus 148 ~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d 194 (612)
T 3gyr_A 148 AVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRD 194 (612)
T ss_dssp CBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEEC
T ss_pred ccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcC
Confidence 37899999999998876 799999997 5688899988777653
No 96
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.89 E-value=0.041 Score=55.26 Aligned_cols=79 Identities=23% Similarity=0.298 Sum_probs=59.6
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
..++++.|+.|+|++.|.+.. .+..|-|.+.++...+ .+.||....+.|+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~v---eDViHSF~IPslGIK~---------------------------DaiPGrtnsvtFt 607 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQI---EDVSHGFVVVNHGVSM---------------------------EISPQQTSSITFV 607 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEEE---------------------------EECTTCEEEEEEE
T ss_pred CEEEEecCceeEEEEecCCcC---CCceeeeEecCCCcee---------------------------eeCCCCeEEEEEE
Confidence 467889999999999996421 1457888776654321 3667888899999
Q ss_pred cCCCeeeEEeecchhhh-hcCcEEEEeecc
Q 016030 342 ADNPGAWAFHCHIEPHF-HIGMGVVLALGV 370 (396)
Q Consensus 342 adnpG~w~~HCHi~~H~-~~GM~~~~~~~~ 370 (396)
++.||.+.+||...-|. ..+|...+.|.+
T Consensus 608 adkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 608 ADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred cCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999999986664 367888777654
No 97
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=95.77 E-value=0.039 Score=43.15 Aligned_cols=59 Identities=17% Similarity=0.339 Sum_probs=43.6
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.++.++|++|+++||++.|.... ...|.+.+. |. ...+.|||.+++.+.+++ +| .|+..
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~~--------~~~i~pG~~~~~~f~~~~-~G-~y~~~ 94 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------GV--------QEVIKAGETKTISFTADK-AG-AFTIW 94 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------TE--------EEEECTTCEEEEEEECCS-CE-EEEEB
T ss_pred cCCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------Cc--------eeEeCCCCEEEEEEECCC-CE-EEEEE
Confidence 45789999999999999999853 233444432 21 467999999999998865 44 88764
No 98
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.58 E-value=0.0035 Score=50.84 Aligned_cols=80 Identities=18% Similarity=0.271 Sum_probs=47.6
Q ss_pred CCCceEEEE-cCCCeEEEEEEecCccc----eEEEEEeCce-eEEEE-------eCCceee---e-eEeceEEecCCceE
Q 016030 45 QCAPQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQ---P-FEVDDMDIYSGESY 107 (396)
Q Consensus 45 ~~~~~~~~v-~~G~~yRlRlINa~~~~----~~~~sId~h~-l~VIa-------~DG~~v~---P-~~v~~l~i~~GqRy 107 (396)
...+..|+| ++|++++|.|.|.+... ..+|.|++.. +.-++ .|-.++. + ...++-.|.|||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 445678999 99999999999999652 2334443221 00000 1112332 1 11233359999999
Q ss_pred EEEEeeCC-CCCcceEEE
Q 016030 108 SVLLTTNQ-DPSYNYWIS 124 (396)
Q Consensus 108 DVlv~~~~-~~~~~y~ir 124 (396)
+|.++++. .+|++|+..
T Consensus 94 svtf~~~~l~~G~~Y~f~ 111 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFF 111 (128)
T ss_dssp EEEEEGGGSCTTSCEEEE
T ss_pred EEEEeccccCCCceEEEE
Confidence 99999872 244468764
No 99
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.51 E-value=0.044 Score=46.31 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=59.6
Q ss_pred eEEe-ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c-c-ccccCCC---C-CCccceEEeCC
Q 016030 263 VYML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E-D-EKKFNLK---N-PPLKNTAVIFP 332 (396)
Q Consensus 263 ~~~~-~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~---~-~-~~~~n~~---~-p~~rDTv~vp~ 332 (396)
.+.+ +.|+.|.|+|.|.+.+ |---=+|.|-+...+. +.. + . ....++. + -....+..|.|
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~--------p~~~m~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~p 128 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQ--------PKASMGHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGG 128 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCS--------CHHHHCBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCC--------ccccccceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCC
Confidence 5788 8999999999997621 1000024454333221 100 0 0 0000110 1 12334667889
Q ss_pred CcEEEEEEEcC--CCeeeEEeecchhhhhcCcEEEEee
Q 016030 333 YGWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 333 ~g~~~irf~ad--npG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
|+...|-|.++ .||.+-|+|-+--|.. ||-..+.|
T Consensus 129 Get~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V 165 (167)
T 3ay2_A 129 GEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTL 165 (167)
T ss_dssp TCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEE
T ss_pred CCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEE
Confidence 99999999987 8999999999988988 89887765
No 100
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.30 E-value=0.1 Score=42.41 Aligned_cols=69 Identities=16% Similarity=0.289 Sum_probs=49.4
Q ss_pred EEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEcC
Q 016030 264 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 343 (396)
Q Consensus 264 ~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ad 343 (396)
+.++.|+.|+|++.|.+ ..|-| .|-+.+ . -+.+.||....+.|.++
T Consensus 62 l~Vp~G~~V~~~vts~D-------V~Hsf-------~ip~~~-----------------~---k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-------VIHGF-------HVEGTN-----------------I---NVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSS-------SCEEE-------EETTSS-----------------C---EEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCC-------ccceE-------EecCCC-----------------c---eeEeCCCCcEEEEEEcC
Confidence 78999999999999864 34443 321111 0 13456677778999999
Q ss_pred CCeeeEEeecc---hhhhhcCcEEEEee
Q 016030 344 NPGAWAFHCHI---EPHFHIGMGVVLAL 368 (396)
Q Consensus 344 npG~w~~HCHi---~~H~~~GM~~~~~~ 368 (396)
.||.+.++|.. ..| .+|-..+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999977 566 488776654
No 101
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.30 E-value=0.011 Score=47.83 Aligned_cols=79 Identities=22% Similarity=0.224 Sum_probs=47.4
Q ss_pred CCCceEEEE-cCCCeEEEEEEecCccc----eEEEEEeCce-eEEEE-------eCCceee---ee-EeceEEecCCceE
Q 016030 45 QCAPQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQ---PF-EVDDMDIYSGESY 107 (396)
Q Consensus 45 ~~~~~~~~v-~~G~~yRlRlINa~~~~----~~~~sId~h~-l~VIa-------~DG~~v~---P~-~v~~l~i~~GqRy 107 (396)
...+..|+| ++|++++|.|.|.+... ...|.|.+.. +.-++ .|-.++. +. ..++-.|.|||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 445678999 99999999999999652 2333333221 00000 0112221 11 1233458999999
Q ss_pred EEEEeeC--CCCCcceEEE
Q 016030 108 SVLLTTN--QDPSYNYWIS 124 (396)
Q Consensus 108 DVlv~~~--~~~~~~y~ir 124 (396)
+|.++++ + +|++||..
T Consensus 94 svtf~~~~l~-~G~~Y~f~ 111 (129)
T 2ccw_A 94 SVTFDVSKIA-AGENYAYF 111 (129)
T ss_dssp EEEEEGGGSC-TTCCEEEE
T ss_pred EEEEeccccC-CCceEEEE
Confidence 9999987 4 44478764
No 102
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.14 E-value=0.15 Score=41.17 Aligned_cols=96 Identities=18% Similarity=0.237 Sum_probs=60.3
Q ss_pred ceEEeecC-CEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c---cccccCCC---CC-CccceEEe
Q 016030 262 GVYMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E---DEKKFNLK---NP-PLKNTAVI 330 (396)
Q Consensus 262 ~~~~~~~g-~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~---~---~~~~~n~~---~p-~~rDTv~v 330 (396)
..+.++.| +.+.+++.|.+.+ |---=+|.|-+...+. +.. + .....++. ++ ....+..|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~--------~~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l 87 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHM--------PKTGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPII 87 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSS--------CHHHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCB
T ss_pred CeEEEcCCCeEEEEEEEECCCC--------cccccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEE
Confidence 35899999 9999999997632 1000134554443321 000 0 00000110 11 12345678
Q ss_pred CCCcEEEEEEEcC---CCeeeEEeecchhhhhcCcEEEEee
Q 016030 331 FPYGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 331 p~~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
.||+...+.|.++ .||.+-|.|-+--|.. ||-..+.|
T Consensus 88 ~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V 127 (129)
T 1cuo_A 88 GGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKL 127 (129)
T ss_dssp CTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEE
Confidence 8999999999987 9999999999888988 89887765
No 103
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.04 E-value=0.068 Score=42.69 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=26.4
Q ss_pred CCCcEEEEEEEcCCCeeeEEeecchhhhhcCcEEEEeecc
Q 016030 331 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 370 (396)
Q Consensus 331 p~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 370 (396)
.+++...+.| +.||.|.|+|-+ |.. |...+.|.+
T Consensus 59 ~~g~t~~~tF--~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 59 KINENYKVTF--TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CTTCCEEEEE--CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 4677666666 899999999987 766 888777653
No 104
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.00 E-value=0.099 Score=39.91 Aligned_cols=59 Identities=14% Similarity=0.286 Sum_probs=42.8
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|++.|.+... ..|.+++... ...+.+|+..++.+.+++. | .|...
T Consensus 26 ~P~~i~v~~G~tV~~~~~n~d~~~-H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~~-G-~Y~y~ 84 (100)
T 4hci_A 26 NPNVITIPINESTTLLLKNKGKSE-HTFTIKKLGI----------------DVVVESGKEKNITVKPKSA-G-TYELI 84 (100)
T ss_dssp ESSEEEECTTSCEEEEEEECSSSC-EEEEEGGGTE----------------EEEECTTCEEEEEECCCSC-E-EEEEE
T ss_pred eCCEEEECCCCEEEEEEEcCCCce-EEEEEecCCc----------------ceeecCCcceeEEEecccC-c-eEEEE
Confidence 456899999999999999987543 3555544332 2357899999999988764 3 77653
No 105
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.44 E-value=0.026 Score=45.62 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=46.6
Q ss_pred CCCceEEEE-cCCCeEEEEEEecCccc----eEEEEEeCc-eeEEEE-------eCCceee---e-eEeceEEecCCceE
Q 016030 45 QCAPQILHV-QPNKTYRLRIASTTALA----SLNLAVKNH-KMVVVE-------ADGNYVQ---P-FEVDDMDIYSGESY 107 (396)
Q Consensus 45 ~~~~~~~~v-~~G~~yRlRlINa~~~~----~~~~sId~h-~l~VIa-------~DG~~v~---P-~~v~~l~i~~GqRy 107 (396)
...+..|+| ++|++++|.|.|.+... ..+|.|+.. .+.-++ .|-.++. + ...++-.|.|||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 345678999 99999999999999652 223333321 000000 1112221 1 12234458999999
Q ss_pred EEEEeeCC-CCCcceEEE
Q 016030 108 SVLLTTNQ-DPSYNYWIS 124 (396)
Q Consensus 108 DVlv~~~~-~~~~~y~ir 124 (396)
++.++++. .+|++|+..
T Consensus 93 ~vtf~~~~l~~G~~Y~f~ 110 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFF 110 (128)
T ss_dssp EEEEESSCCCTTCCEEEE
T ss_pred EEEEeccccCCCceEEEE
Confidence 99999872 244368653
No 106
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=94.28 E-value=0.079 Score=43.21 Aligned_cols=71 Identities=25% Similarity=0.286 Sum_probs=46.7
Q ss_pred CCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeC----------------Cceee-----eeEeceEEecCC
Q 016030 46 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD----------------GNYVQ-----PFEVDDMDIYSG 104 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~D----------------G~~v~-----P~~v~~l~i~~G 104 (396)
..+..++|++|++++|++.|.+... -.|++.+...+ ..++. ....++..|.+|
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~------~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLG------VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAG 103 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSC------CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTT
T ss_pred EeCCeEEECCCCEEEEEEECCCCCC------CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCC
Confidence 3456899999999999999932111 24555555321 11221 123456779999
Q ss_pred ceEEEEEeeCCCCCcceEEE
Q 016030 105 ESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 105 qRyDVlv~~~~~~~~~y~ir 124 (396)
+..++.+.+++ +| .|++.
T Consensus 104 ~~~~~~~~~~~-~G-~y~f~ 121 (140)
T 1qhq_A 104 ESGSVTFRTPA-PG-TYLYI 121 (140)
T ss_dssp EEEEEEEECCS-SE-EEEEE
T ss_pred ceeEEEEEeCC-Ce-eEEEE
Confidence 99999999876 43 88765
No 107
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=94.05 E-value=0.034 Score=42.73 Aligned_cols=72 Identities=15% Similarity=0.275 Sum_probs=43.2
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.++.++|++|++++| +|.+.. ...+.+.+..+.. .+|..-.....+.+.|.|||++++-+.++..+| .||..
T Consensus 17 ~p~~i~v~~Gd~V~~--~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G-~y~y~ 88 (105)
T 3cvb_A 17 EPANVTVHPGDTVKW--VNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAG-TYTYY 88 (105)
T ss_dssp ESSEEEECTTEEEEE--EECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSE-EEEEE
T ss_pred eCCEEEEcCCCEEEE--EECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCe-eEEEE
Confidence 457899999998765 688643 3355554432211 011111111245678999999999877643354 89875
No 108
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.01 E-value=0.0093 Score=47.82 Aligned_cols=77 Identities=22% Similarity=0.311 Sum_probs=47.7
Q ss_pred CCCceEEEEcC-CCeEEEEEEecCcc------ceEEEEEeCceeEEEEe-------CCceeee----eEeceEEecCCce
Q 016030 45 QCAPQILHVQP-NKTYRLRIASTTAL------ASLNLAVKNHKMVVVEA-------DGNYVQP----FEVDDMDIYSGES 106 (396)
Q Consensus 45 ~~~~~~~~v~~-G~~yRlRlINa~~~------~~~~~sId~h~l~VIa~-------DG~~v~P----~~v~~l~i~~GqR 106 (396)
+..+..|+|+. |+++||.|.|.|.. ..+.|.=++ .+.-++. |-.|+.+ +..+.-.|++||.
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcE
Confidence 44567899975 99999999999975 233333111 1111111 3345532 2335556999999
Q ss_pred EEEEEeeCC--CCCcceEE
Q 016030 107 YSVLLTTNQ--DPSYNYWI 123 (396)
Q Consensus 107 yDVlv~~~~--~~~~~y~i 123 (396)
+++.++++. .+| +|..
T Consensus 93 ~~vtf~~~~l~~~G-~y~f 110 (125)
T 3fsa_A 93 DSVTFDVSKLKEGE-QYMF 110 (125)
T ss_dssp EEEEEEGGGC---C-CEEE
T ss_pred EEEEEeCcCcCCCc-cEEE
Confidence 999999873 243 7765
No 109
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=93.55 E-value=0.058 Score=43.57 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=46.2
Q ss_pred CCCceEEEEcCC-CeEEEEEEecCccceEEEEEeCceeEEEEeC---------------Cceee---ee-EeceEEecCC
Q 016030 45 QCAPQILHVQPN-KTYRLRIASTTALASLNLAVKNHKMVVVEAD---------------GNYVQ---PF-EVDDMDIYSG 104 (396)
Q Consensus 45 ~~~~~~~~v~~G-~~yRlRlINa~~~~~~~~sId~h~l~VIa~D---------------G~~v~---P~-~v~~l~i~~G 104 (396)
...+..|+|++| ++++|.|.|.+...- ..-+|++.+.... -.++. +. ....-.|.||
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~---~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pG 90 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPK---TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGG 90 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCH---HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTT
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcc---cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCC
Confidence 345678999999 999999999986420 0013443333211 01221 10 1123458999
Q ss_pred ceEEEEEeeC--CCCCcceEEE
Q 016030 105 ESYSVLLTTN--QDPSYNYWIS 124 (396)
Q Consensus 105 qRyDVlv~~~--~~~~~~y~ir 124 (396)
|+++|.++++ ..+| +||..
T Consensus 91 et~svtf~~~~~~~~G-~Y~f~ 111 (129)
T 1cuo_A 91 EKTSVKFKVSALSKDE-AYTYF 111 (129)
T ss_dssp CEEEEEEEGGGCCTTS-CEEEE
T ss_pred CEEEEEEeccccCCCc-eEEEE
Confidence 9999999987 2344 88764
No 110
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.29 E-value=0.42 Score=40.28 Aligned_cols=72 Identities=15% Similarity=0.279 Sum_probs=53.0
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|+.|+|.+.|.+ ..|.|.+=..... +.+.||....+.|.+
T Consensus 94 ~l~VP~G~~Vr~~vTS~D-------ViHsf~IP~lgik---------------------------~da~PG~~n~~~~~~ 139 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD-------VIHGFHVEGTNIN---------------------------VEVLPGEVSTVRYTF 139 (168)
T ss_dssp SEEEETTSEEEEEEECSS-------SCEEEEETTSSCE---------------------------EEECTTBCEEEEEEC
T ss_pred EEEEeCCCeEEEEEecCC-------ceEEEEECCCCeE---------------------------EEecCCceeEEEEEe
Confidence 378999999999999975 4677665443221 224567777889999
Q ss_pred CCCeeeEEeecc-hhhhhcCcEEEEee
Q 016030 343 DNPGAWAFHCHI-EPHFHIGMGVVLAL 368 (396)
Q Consensus 343 dnpG~w~~HCHi-~~H~~~GM~~~~~~ 368 (396)
+.||.+.+.|.. --+...+|...+.|
T Consensus 140 ~kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 140 KRPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp CSCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 999999999985 44556788776655
No 111
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=92.95 E-value=0.041 Score=42.43 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=40.9
Q ss_pred CCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeC-----CceeeeeEeceEEecCCceEEEEEeeCCCCCcc
Q 016030 46 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD-----GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 120 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~D-----G~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~ 120 (396)
..|..++|++|++++|+ |.+.. .|.+.+.... |..-.....+.+.+.+||++++-+.++..+| .
T Consensus 17 F~P~~i~v~~Gd~V~~~--n~~~~--------~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G-~ 85 (106)
T 2gim_A 17 FEPAKLTIKPGDTVEFL--NNKVP--------PHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAG-E 85 (106)
T ss_dssp EESSEEEECTTCEEEEE--ECSSS--------CCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSE-E
T ss_pred EcCCEEEECCCCEEEEE--ECCCC--------CceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecCCCCc-e
Confidence 34578999999998775 87632 2555433211 1100011134677999999999776533354 8
Q ss_pred eEEE
Q 016030 121 YWIS 124 (396)
Q Consensus 121 y~ir 124 (396)
||..
T Consensus 86 y~y~ 89 (106)
T 2gim_A 86 YTFY 89 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 112
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=92.90 E-value=0.65 Score=37.30 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=58.8
Q ss_pred ceEEe-ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----cc--cccCCC---CC-CccceEEe
Q 016030 262 GVYML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----DE--KKFNLK---NP-PLKNTAVI 330 (396)
Q Consensus 262 ~~~~~-~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~----~~--~~~n~~---~p-~~rDTv~v 330 (396)
..+.+ +.|+.|.+++.|.+.+ |---=+|.|-+...+. +... .. ...++. ++ ....+..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~--------p~~~m~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l 87 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKM--------AKVAMGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVI 87 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCC--------CHHHHCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCB
T ss_pred ceEEEecCCCEEEEEEEECCCc--------ccccCcceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEE
Confidence 35788 8899999999997632 1000034454333221 1000 00 000111 11 12245568
Q ss_pred CCCcEEEEEEEcC--CCee-eEEeecchhhhhcCcEEEEeec
Q 016030 331 FPYGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 331 p~~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
.||+...|-|.++ .||. +-|.|-+--|.. ||-..+.|.
T Consensus 88 ~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 88 GGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999999999998 7865 999999888888 898877653
No 113
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.78 E-value=0.79 Score=36.73 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=58.3
Q ss_pred ceEEe-ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCC------CCCcccccccCCCC---C-CccceEEe
Q 016030 262 GVYML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG------KFTKEDEKKFNLKN---P-PLKNTAVI 330 (396)
Q Consensus 262 ~~~~~-~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g------~~~~~~~~~~n~~~---p-~~rDTv~v 330 (396)
..+.+ +.|+.|.+++.|.+.+ |---=+|.|-+...+.- ..... ...++.. + ....|-.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~--------p~~~m~H~~vi~~~~~~~~~~~~~m~~~--~~~~~~~~~~~~~~~~t~~l 87 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSL--------PKNVMGHNLVISKEADMQPIATDGLSAG--IDKQYLKDGDARVIAHTKVI 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSC--------CHHHHCBCCEEEEGGGHHHHHHHHTTTC--GGGTTSCTTCTTEEEECCCB
T ss_pred CEEEEecCCCEEEEEEEECCCC--------cccCCCceEEEccccchhhHHHHHhhcc--ccccccccccchhheeeeee
Confidence 35788 8999999999997621 10101234433332110 00000 0001111 1 12345568
Q ss_pred CCCcEEEEEEEcC--CCee-eEEeecchhhhhcCcEEEEee
Q 016030 331 FPYGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 331 p~~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 368 (396)
.||+...|-|.+. .||. +-|.|-+--|.. ||-..+.|
T Consensus 88 ~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 88 GAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp CTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999999999987 7876 999999988988 89887765
No 114
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=92.68 E-value=0.11 Score=43.91 Aligned_cols=76 Identities=21% Similarity=0.326 Sum_probs=46.6
Q ss_pred CCCceEEEE-cCCCeEEEEEEecCccceEEEEEeCceeEEEEe--------------CCceee---e-eEeceEEecCCc
Q 016030 45 QCAPQILHV-QPNKTYRLRIASTTALASLNLAVKNHKMVVVEA--------------DGNYVQ---P-FEVDDMDIYSGE 105 (396)
Q Consensus 45 ~~~~~~~~v-~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~--------------DG~~v~---P-~~v~~l~i~~Gq 105 (396)
...+..|+| ++|++++|.|.|.+....- --+|+|.|... +-.++. + ...+...|.+||
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~---~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGe 130 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKA---SMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGE 130 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHH---HHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccc---cccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCC
Confidence 345678999 9999999999999865200 00233333221 112221 1 122344689999
Q ss_pred eEEEEEeeCC-CCCcceEEE
Q 016030 106 SYSVLLTTNQ-DPSYNYWIS 124 (396)
Q Consensus 106 RyDVlv~~~~-~~~~~y~ir 124 (396)
+++|.++++. .+| .||..
T Consensus 131 t~svtf~~~~lkpG-~Y~f~ 149 (167)
T 3ay2_A 131 ESSLTLDPAKLADG-DYKFA 149 (167)
T ss_dssp EEEEEECGGGGTTS-CEEEE
T ss_pred EEEEEEecCCCCCc-EEEEE
Confidence 9999999872 244 78764
No 115
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=92.49 E-value=0.66 Score=37.22 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=59.1
Q ss_pred ceEEe-ecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----cc--cccCCC---CC-CccceEEe
Q 016030 262 GVYML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----DE--KKFNLK---NP-PLKNTAVI 330 (396)
Q Consensus 262 ~~~~~-~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~----~~--~~~n~~---~p-~~rDTv~v 330 (396)
..+.+ +.|+.|.+++.|.+.+ |---=+|.|-+...+ ..... .. ...++. ++ ....|..|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~--------p~~~m~Hn~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l 86 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKL--------PKAAMGHNVVVSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVI 86 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCS--------CHHHHCBCCEEEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCB
T ss_pred CEEEEecCCcEEEEEEEECCCC--------cccCCCceEEEcccc--chhhHHHhhhhccccccccccccchhhccceee
Confidence 35788 8899999999997621 101113444333221 10000 00 000111 11 12345568
Q ss_pred CCCcEEEEEEEcC--CCe-eeEEeecchhhhhcCcEEEEeec
Q 016030 331 FPYGWTALRFVAD--NPG-AWAFHCHIEPHFHIGMGVVLALG 369 (396)
Q Consensus 331 p~~g~~~irf~ad--npG-~w~~HCHi~~H~~~GM~~~~~~~ 369 (396)
.||+...+-|.+. .|| .+-|.|-+--|.. ||-..+.|.
T Consensus 87 ~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 87 GGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 9999999999988 898 4999999988988 998877653
No 116
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=92.06 E-value=0.93 Score=36.10 Aligned_cols=93 Identities=17% Similarity=0.258 Sum_probs=58.8
Q ss_pred ceEEeec-CCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c-cc--cccCCC----CCCccceEEe
Q 016030 262 GVYMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E-DE--KKFNLK----NPPLKNTAVI 330 (396)
Q Consensus 262 ~~~~~~~-g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~---~-~~--~~~n~~----~p~~rDTv~v 330 (396)
..+.++. |+.|.++|.|.+.+ |---=||.| ||+.. +.... + .. ..-++. ....-.|..|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~--------p~~~M~Hn~-Vl~~~-~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l 87 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNL--------PKNVMGHNW-VLSTA-ADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLI 87 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSC--------CHHHHCBCC-EEEEH-HHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCB
T ss_pred CEEEEecCCCEEEEEEEECCcc--------cccccCceE-EEccc-chHHHHHHHHHhcChhhccCCCCCccceecccee
Confidence 4578875 99999999997632 322235677 44432 11100 0 00 011221 1234567779
Q ss_pred CCCcEEEEEEEcC---CCeeeEEeecchhhhhcCcEEEEee
Q 016030 331 FPYGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 368 (396)
Q Consensus 331 p~~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 368 (396)
.||+...|-|.+. .||.+-|-|- -|. ||...+.+
T Consensus 88 ~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 88 GSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp CTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999999999987 8999999999 888 99887765
No 117
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=89.59 E-value=0.21 Score=37.99 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=40.4
Q ss_pred CCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCce-------eee-eEeceEEecCCceEEEEEeeCCCC
Q 016030 46 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY-------VQP-FEVDDMDIYSGESYSVLLTTNQDP 117 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~-------v~P-~~v~~l~i~~GqRyDVlv~~~~~~ 117 (396)
..|..++|++|++++|+ |.+.. .|++.+..-++.. ..| ...+.+.+.+||.+.+-+ ++ +
T Consensus 14 F~P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~ 80 (102)
T 1kdj_A 14 FYPDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--ST-P 80 (102)
T ss_dssp EESSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CS-C
T ss_pred EeCCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CC-C
Confidence 34678999999998865 77642 4666654334421 001 112457789999998844 43 4
Q ss_pred CcceEEE
Q 016030 118 SYNYWIS 124 (396)
Q Consensus 118 ~~~y~ir 124 (396)
| .|+..
T Consensus 81 G-~y~y~ 86 (102)
T 1kdj_A 81 G-TYTFY 86 (102)
T ss_dssp E-EEEEE
T ss_pred e-EEEEE
Confidence 4 78664
No 118
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=88.99 E-value=0.57 Score=35.13 Aligned_cols=63 Identities=19% Similarity=0.288 Sum_probs=39.2
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCcee--eeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV--QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v--~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|+ |.+.. .|++.+.+.+. +. .....+.+.+.+||.+.+-+ ++ +| .|+..
T Consensus 17 ~P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf--~~-~G-~y~y~ 81 (97)
T 1b3i_A 17 EPKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTL--GT-PG-TYSFY 81 (97)
T ss_dssp ESSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEEC--CS-CS-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEEe--CC-Ce-EEEEE
Confidence 3568999999987665 76532 46666654322 11 01113557789999998855 33 44 78764
No 119
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=87.25 E-value=1.1 Score=33.42 Aligned_cols=67 Identities=21% Similarity=0.357 Sum_probs=38.8
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++| .|.+.. ...|.+.+..+ -+|..-.....+.+.+.+||++.+-+ ++ +| .|+..
T Consensus 16 ~P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~G-~y~y~ 82 (98)
T 2plt_A 16 VPKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKL--TA-AG-EYGYY 82 (98)
T ss_dssp ESSEEEECTTCEEEE--EECSSC-CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----CCccccccccccceecCCCCEEEEEe--CC-Ce-EEEEE
Confidence 456899999998876 688742 23444433211 01111000123567899999998854 43 44 78764
No 120
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=86.56 E-value=2.1 Score=31.29 Aligned_cols=59 Identities=17% Similarity=0.349 Sum_probs=36.5
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|+ |.+.. ...+.+.+ +. +...+...+.+|+.+.+-+ ++ +| .|+..
T Consensus 17 ~P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~---------~~---~~~~~~~~~~~g~~~~~~f--~~-~G-~y~~~ 75 (91)
T 1bxv_A 17 EPSTIEIQAGDTVQWV--NNKLA-PHNVVVEG---------QP---ELSHKDLAFSPGETFEATF--SE-PG-TYTYY 75 (91)
T ss_dssp ESSEEEECTTCEEEEE--ECSSC-CEEEEETT---------CG---GGCEEEEECSTTCEEEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCCC-CcEEEEeC---------CC---ccCcccceeCCCCEEEEEe--CC-CE-EEEEE
Confidence 4568999999998775 76532 22333332 11 1123557789999988754 43 44 88765
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=86.41 E-value=0.98 Score=33.97 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=37.5
Q ss_pred CCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe---CCceeeeeEeceEEecCCceEEEEEeeCCCCCcceE
Q 016030 46 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 122 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~---DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ 122 (396)
..|..++|++|++++|+ |.+.. .|++.+.+. +|........+.+.+.+||.+.+-+ ++ +| .|+
T Consensus 15 F~P~~i~v~~GdtV~~~--n~~~~--------~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~-~G-~y~ 80 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEFV--NNAGF--------PHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKL--ST-PG-VYG 80 (98)
T ss_dssp EESSEEEECTTCEEEEE--ECSSC--------CEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEEC--CS-CE-EEE
T ss_pred EeCCEEEECCCCEEEEE--ECCCC--------CEEEEEeCCCCccccccccccccccccCCCCEEEEEc--CC-CE-EEE
Confidence 34678999999997764 77542 233332211 1111111123357899999998855 33 44 887
Q ss_pred EE
Q 016030 123 IS 124 (396)
Q Consensus 123 ir 124 (396)
..
T Consensus 81 y~ 82 (98)
T 1iuz_A 81 VY 82 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 122
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=86.31 E-value=0.98 Score=37.38 Aligned_cols=73 Identities=8% Similarity=0.028 Sum_probs=40.0
Q ss_pred eEEEEcCCCeEEEEEEecCccceEEEEEeCc--eeEEEEeCCceeeeeEeceEEecCCc--eEEEEEeeCCCCCcceEEE
Q 016030 49 QILHVQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGE--SYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlINa~~~~~~~~sId~h--~l~VIa~DG~~v~P~~v~~l~i~~Gq--RyDVlv~~~~~~~~~y~ir 124 (396)
+.|+|++|++++|++.|.+......|.|... .+.....+ ..+.+..-..-.|.||| ...+.+.+ + +| .||..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tft~-~-pG-tY~y~ 136 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTWHP-T-AG-TYYYV 136 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEECC-C-SE-EEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEEEE-C-Cc-eEEEE
Confidence 6899999999999999974322223333311 11000000 00101000011679999 88888887 5 44 89875
Q ss_pred E
Q 016030 125 A 125 (396)
Q Consensus 125 ~ 125 (396)
-
T Consensus 137 C 137 (154)
T 2cal_A 137 C 137 (154)
T ss_dssp C
T ss_pred C
Confidence 3
No 123
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=85.71 E-value=0.96 Score=33.89 Aligned_cols=66 Identities=11% Similarity=0.242 Sum_probs=37.5
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|+ |.+.. ...|.+.+...- |..-.....+.+.+.+||.+.+-+ ++ +| .|+..
T Consensus 17 ~P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf--~~-~G-~y~~~ 82 (98)
T 1pcs_A 17 EPSTVTIKAGEEVKWV--NNKLS-PHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTF--TE-PG-TYTYY 82 (98)
T ss_dssp ESSEEEECTTCEEEEE--ECSSC-CEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCCC-CcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEc--CC-Ce-EEEEE
Confidence 4568999999998876 76532 223333321100 000001113567899999998754 43 44 88764
No 124
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=84.56 E-value=2.9 Score=42.42 Aligned_cols=63 Identities=14% Similarity=0.266 Sum_probs=46.1
Q ss_pred CCCceEEEEcCCCeEEEEEEecCcc--ceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceE
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTAL--ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 122 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~--~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ 122 (396)
...++.++|++|++++|++.|.... ....|.|.++.+. ..+.||+...+-+.+++ +| .||
T Consensus 509 ~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~~-pG-tY~ 570 (595)
T 1fwx_A 509 SFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAAN-PG-VYW 570 (595)
T ss_dssp EESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CE-EEE
T ss_pred cccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECCC-CE-EEE
Confidence 4467899999999999999996532 2344555554311 57899999999999876 44 898
Q ss_pred EEE
Q 016030 123 ISA 125 (396)
Q Consensus 123 ir~ 125 (396)
..-
T Consensus 571 yhC 573 (595)
T 1fwx_A 571 YYC 573 (595)
T ss_dssp EEC
T ss_pred EEC
Confidence 863
No 125
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=82.73 E-value=1.5 Score=33.51 Aligned_cols=60 Identities=18% Similarity=0.249 Sum_probs=36.2
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEE-eCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE-ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa-~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++| +|.+.. .|++...+ .||.. . .++-.|.+|+++.+-+ ++ +| .|+..
T Consensus 31 ~P~~i~v~~Gd~V~~--~N~d~~--------~H~v~~~~~~~g~~--~--~~~~~~~pG~~~~~tf--~~-~G-~y~y~ 91 (105)
T 2ov0_A 31 ETPELHVKVGDTVTW--INREAM--------PHNVHFVAGVLGEA--A--LKGPMMKKEQAYSLTF--TE-AG-TYDYH 91 (105)
T ss_dssp SSSEEEECTTCEEEE--EECSSS--------CBCCEECTTTSSSS--C--EECCCBCTTEEEEEEE--CS-CE-EEEEE
T ss_pred cCCEEEECCCCEEEE--EECCCC--------CEEEEEcCCCCCcc--c--ccccccCCCCEEEEEe--CC-CE-EEEEE
Confidence 357899999999766 588752 34433321 13321 1 1222478999988765 33 44 88875
No 126
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=81.30 E-value=1.1 Score=33.73 Aligned_cols=64 Identities=19% Similarity=0.358 Sum_probs=37.6
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe---CCceee--eeEeceEEecCCceEEEEEeeCCCCCcce
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNY 121 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~---DG~~v~--P~~v~~l~i~~GqRyDVlv~~~~~~~~~y 121 (396)
.|..++|++|++++| .|.+.. .|++.+.+. ||.... ....+.+.+.+||.+.+-+ ++ +| .|
T Consensus 15 ~P~~i~v~~G~tV~~--~n~~~~--------~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~-~G-~y 80 (99)
T 1plc_A 15 VPSEFSISPGEKIVF--KNNAGF--------PHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL--SN-KG-EY 80 (99)
T ss_dssp ESSEEEECTTCEEEE--EECSSC--------CBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC--CS-CE-EE
T ss_pred eCCEEEECCCCEEEE--EECCCC--------ceEEEEeCCCCcccccccccccccCccccCCCCEEEEEE--CC-Cc-eE
Confidence 467899999998876 687642 244443321 121110 0112346789999998855 33 44 88
Q ss_pred EEE
Q 016030 122 WIS 124 (396)
Q Consensus 122 ~ir 124 (396)
+..
T Consensus 81 ~~~ 83 (99)
T 1plc_A 81 SFY 83 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 127
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=80.71 E-value=1.2 Score=33.41 Aligned_cols=64 Identities=22% Similarity=0.320 Sum_probs=38.0
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEe---CCceee--eeEeceEEecCCceEEEEEeeCCCCCcce
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNY 121 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~---DG~~v~--P~~v~~l~i~~GqRyDVlv~~~~~~~~~y 121 (396)
.|..++|++|++++| .|.+.. .|++.+.+. ||.... ....+.+.|.+||.+.+-++ + +| .|
T Consensus 15 ~P~~i~v~~G~tV~~--~n~~~~--------~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~-~G-~y 80 (99)
T 1byp_A 15 VPSDLSIASGEKITF--KNNAGF--------PHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT--E-KG-TY 80 (99)
T ss_dssp ESSEEEECTTEEEEE--EECSSC--------CBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC--S-CE-EE
T ss_pred eCCEEEECCCCEEEE--EECCCC--------cceEEEeCCCCccccccccccccccceeeCCCCEEEEEeC--C-Cc-EE
Confidence 456899999998766 687642 355544321 221110 01124467899999988653 3 44 77
Q ss_pred EEE
Q 016030 122 WIS 124 (396)
Q Consensus 122 ~ir 124 (396)
+..
T Consensus 81 ~~~ 83 (99)
T 1byp_A 81 KFY 83 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 128
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=72.48 E-value=8.4 Score=29.94 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=33.0
Q ss_pred CeEEEEEEecCcc-ceEEEEEeCc-eeEEEEeCCceeeeeEeceEEecCCceEEEEEee
Q 016030 57 KTYRLRIASTTAL-ASLNLAVKNH-KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 113 (396)
Q Consensus 57 ~~yRlRlINa~~~-~~~~~sId~h-~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~ 113 (396)
-.|+|||+|.+.. +.|.|+++|. .+.++. +. .+.+.+||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEEE
Confidence 4599999999854 5789999874 344432 11 3889999977665553
No 129
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=72.10 E-value=4 Score=32.57 Aligned_cols=62 Identities=10% Similarity=0.186 Sum_probs=37.4
Q ss_pred CCCceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeC-CceeeeeEeceEEecCCceEEEEEeeCCCCCcceEE
Q 016030 45 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD-GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 123 (396)
Q Consensus 45 ~~~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~D-G~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~i 123 (396)
...|..++|++|++++|+ |.... .|++.+...+ |. . ..++-.|.+||.+++-+ ++ +| .|+.
T Consensus 56 ~F~P~~i~V~~GdtV~~~--N~d~~--------~H~v~~~~~~~g~--~--~~~s~~l~pG~t~~~tF--~~-~G-~y~y 117 (132)
T 3c75_A 56 KYLTPEVTIKAGETVYWV--NGEVM--------PHNVAFKKGIVGE--D--AFRGEMMTKDQAYAITF--NE-AG-SYDY 117 (132)
T ss_dssp EESSSEEEECTTCEEEEE--ECSSS--------CBCCEECTTTSSS--S--CEECCCBCTTEEEEEEE--CS-CE-EEEE
T ss_pred EEeCCEEEECCCCEEEEE--ECCCC--------ceEEEEeCCCCCc--c--cccccccCCCCEEEEEc--CC-CE-EEEE
Confidence 345678999999998765 77642 3444432211 11 1 12333578999998766 33 44 8876
Q ss_pred E
Q 016030 124 S 124 (396)
Q Consensus 124 r 124 (396)
.
T Consensus 118 ~ 118 (132)
T 3c75_A 118 F 118 (132)
T ss_dssp E
T ss_pred E
Confidence 4
No 130
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=71.55 E-value=14 Score=37.13 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=45.2
Q ss_pred CCceEEEEcCCCeEEEEEEecCc--cceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEE
Q 016030 46 CAPQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 123 (396)
Q Consensus 46 ~~~~~~~v~~G~~yRlRlINa~~--~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~i 123 (396)
..+..|+|+.|+++||.+-|... .-...|.|.++.+. +.+.||+...+-+.+++. | .||.
T Consensus 555 FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadkP-G-vY~y 616 (638)
T 3sbq_A 555 FGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADKP-G-LHWY 616 (638)
T ss_dssp ESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCSC-E-EEEE
T ss_pred ccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCCC-E-EEEE
Confidence 45678899999999999999742 34556666665432 258899999999998774 3 8887
Q ss_pred E
Q 016030 124 S 124 (396)
Q Consensus 124 r 124 (396)
.
T Consensus 617 ~ 617 (638)
T 3sbq_A 617 Y 617 (638)
T ss_dssp E
T ss_pred E
Confidence 5
No 131
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=71.08 E-value=1.8 Score=34.29 Aligned_cols=59 Identities=17% Similarity=0.395 Sum_probs=37.1
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|.+++|.+-|. +|+++..+ + ..|.....+.+.+|+.|++-+ ++ +| .|+..
T Consensus 19 ~P~~i~V~~GdtV~f~~~~~-----------~H~v~~~~--~--~~P~g~~~f~~~pg~t~s~TF--~~-pG-~y~y~ 77 (123)
T 3erx_A 19 EPAFVRAEPGDVINFVPTDK-----------SHNVEAIK--E--ILPEGVESFKSKINESYTLTV--TE-PG-LYGVK 77 (123)
T ss_dssp ESSEEEECTTEEEEEEESST-----------TCCCEECT--T--SSCTTCCCCBCCTTCCEEEEE--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEEECCC-----------CceEEEcC--C--cCCCCccceecCCCCEEEEEe--CC-Ce-EEEEE
Confidence 46789999999988876662 36665432 1 112112234467999888777 33 44 88765
No 132
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=70.66 E-value=4.8 Score=30.63 Aligned_cols=60 Identities=10% Similarity=0.152 Sum_probs=35.3
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCc-eeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN-YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~-~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|+ |.+.. .|++.+.+ +. ... ..++-.|.+|+.+.+-+ ++ +| .|+..
T Consensus 32 ~P~~i~V~~G~tV~~~--N~d~~--------~H~v~~~~--~~~~~~--~~~s~~l~~g~~~~~tf--~~-~G-~y~~~ 92 (106)
T 1id2_A 32 LTPEVTIKAGETVYWV--NGEVM--------PHNVAFKK--GIVGED--AFRGEMMTKDQAYAITF--NE-AG-SYDYF 92 (106)
T ss_dssp SSSEEEECTTCEEEEE--ECSSS--------CBCCEECT--TTSSSS--CEECCCBCTTEEEEEEE--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCCC--------cEEEEEeC--CCCCcc--cccccccCCCCEEEEEe--CC-CE-EEEEE
Confidence 3568999999998765 77653 34443321 11 001 12233578999998766 33 43 77664
No 133
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=69.34 E-value=12 Score=32.35 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=48.8
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.+.++.|+.|++.|.+.| ..|-|-+-....++ .+-||....+.|.
T Consensus 41 n~l~lP~g~~V~~~lTS~D-------ViHSF~IP~lgvK~---------------------------daiPGr~n~l~~~ 86 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-------VMHSFFIPRLGSQI---------------------------YAMAGMQTRLHLI 86 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-------SCEEEEEGGGTEEE---------------------------EECTTCCEEEEEC
T ss_pred ceEEEeCCCEEEEEEecCC-------ceeeEEecccCcEE---------------------------EecCCceEEEEEE
Confidence 3588999999999999976 35655544332221 1335667778899
Q ss_pred cCCCeeeEEeecchhhhh-cCcEEEE
Q 016030 342 ADNPGAWAFHCHIEPHFH-IGMGVVL 366 (396)
Q Consensus 342 adnpG~w~~HCHi~~H~~-~GM~~~~ 366 (396)
++.||.+...|--.-... ..|-..+
T Consensus 87 ~~~pG~y~g~CsE~CG~~Hs~M~~~v 112 (205)
T 1cyx_A 87 ANEPGTYDGICAEICGPGHSGMKFKA 112 (205)
T ss_dssp CSSSEEEEEEECSCCSTTSTTCCEEE
T ss_pred eCCCeEEEEEcccccccchhhceEEE
Confidence 999999999998665443 3454444
No 134
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=67.79 E-value=42 Score=26.23 Aligned_cols=75 Identities=12% Similarity=0.253 Sum_probs=51.8
Q ss_pred CCCeE--EEEEEecCccceEEEEEe-Cc--eeEEEEeCCceee--------eeEeceEEecCCceEEEEEeeCC-CCCcc
Q 016030 55 PNKTY--RLRIASTTALASLNLAVK-NH--KMVVVEADGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 120 (396)
Q Consensus 55 ~G~~y--RlRlINa~~~~~~~~sId-~h--~l~VIa~DG~~v~--------P~~v~~l~i~~GqRyDVlv~~~~-~~~~~ 120 (396)
.|+.+ .|-+.|.+.. ...|.+. ++ +|.|...+|..|- +.......|.|||...+-...++ ...|+
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55555 5667788864 4577776 44 4555555687763 34557889999999888888875 33459
Q ss_pred eEEEEEecCC
Q 016030 121 YWISAGVRGR 130 (396)
Q Consensus 121 y~ir~~~~~~ 130 (396)
|.+++...+.
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9999876653
No 135
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=60.86 E-value=26 Score=27.94 Aligned_cols=57 Identities=19% Similarity=0.342 Sum_probs=38.6
Q ss_pred ceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 48 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 48 ~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
+..+.|+.|+++||++-|... ...|.|.+..+ .+.+.||+.-.+.+.+++. | .|+..
T Consensus 59 P~~l~Vp~G~~V~~~vts~DV--~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~~-G-~y~~~ 115 (135)
T 2cua_A 59 PNPIEVPQGAEIVFKITSPDV--IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKRP-G-EYRII 115 (135)
T ss_dssp SSSEEEETTSEEEEEEEBSSS--CEEEEETTSSC----------------EEEECBTBCEEEEEECCSC-E-EEEEE
T ss_pred CCEEEEcCCCEEEEEEEeCCc--cceEEecCCCc----------------eeEeCCCCcEEEEEEcCCC-E-EEEEE
Confidence 446889999999999888653 34455554432 1356788877788887763 3 78765
No 136
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=60.62 E-value=25 Score=32.22 Aligned_cols=72 Identities=19% Similarity=0.278 Sum_probs=50.3
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.+.++.|+.|++.+.+.| .-|.|.+-....+ .| +-||....+.|.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-------ViHsf~iP~lg~k------------------------~d---aiPG~~n~~~~~ 234 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-------VIHAWTIPAFAVK------------------------QD---AVPGRIAQLWFS 234 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-------SCEEEEEGGGTEE------------------------EE---ECTTCCEEEEEE
T ss_pred ceEEEEcCCEEEEEEEeCC-------ccceeeEcccCce------------------------EE---ecCCceEEEEEE
Confidence 4689999999999999976 4566655443322 12 335666778999
Q ss_pred cCCCeeeEEeecchhh-hhcCcEEEEe
Q 016030 342 ADNPGAWAFHCHIEPH-FHIGMGVVLA 367 (396)
Q Consensus 342 adnpG~w~~HCHi~~H-~~~GM~~~~~ 367 (396)
++.||.+...|.-.-- -+..|-..+.
T Consensus 235 ~~~~G~y~g~CsE~CG~~Hs~M~~~v~ 261 (298)
T 3hb3_B 235 VDQEGVYFGQCSELCGINHAYMPIVVK 261 (298)
T ss_dssp CSSSEEEEECCCSCCSTTTTSCCEEEE
T ss_pred eCCCEEEEEEcccccCcCccCCeeEEE
Confidence 9999999999995533 3344655544
No 137
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=58.26 E-value=69 Score=25.54 Aligned_cols=58 Identities=9% Similarity=0.212 Sum_probs=32.4
Q ss_pred EEEEcCCCeEEEEEEecC-ccceEEEEEeCceeEEEEeCCceeeeeEeceEEecC-CceEEEEEeeCC
Q 016030 50 ILHVQPNKTYRLRIASTT-ALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYS-GESYSVLLTTNQ 115 (396)
Q Consensus 50 ~~~v~~G~~yRlRlINa~-~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~-GqRyDVlv~~~~ 115 (396)
-+.+++|++|+|.|---+ ..+.+.+.|.. .+.....+....+.+.. =|.|++.+++..
T Consensus 66 ~i~l~~G~~Y~lsf~aka~~~~~i~v~l~~--------~~~~~~~~~~~~~~lt~~w~~~~~~ft~~~ 125 (155)
T 1gui_A 66 WIGLYRGKTYTISFKAKADTPRPINVKILQ--------NHDPWTNYFAQTVNLTADWQTFTFTYTHPD 125 (155)
T ss_dssp EEECCTTCEEEEEEEEEESSCEEEEEEEEC--------SSTTCCEEEEEEEEECSSCEEEEEEEECCT
T ss_pred cEEeCCCCEEEEEEEEEeCCCCcEEEEEEc--------CCCChHHheeccEeeCCCCEEEEEEEEcCC
Confidence 477899999998876433 33455555442 12222222223444544 356777777765
No 138
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=57.61 E-value=30 Score=31.06 Aligned_cols=73 Identities=22% Similarity=0.320 Sum_probs=49.7
Q ss_pred cceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEE
Q 016030 261 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 340 (396)
Q Consensus 261 ~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf 340 (396)
.+.+.++.|+.|++.+.+.| ..|-|.+-..... .| +-||....+.|
T Consensus 170 dn~l~lP~g~~v~~~~tS~D-------ViHsf~ip~l~~k------------------------~d---a~PG~~n~~~~ 215 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGAD-------VIHSWTVPAFGVK------------------------QD---AVPGRLAQLWF 215 (262)
T ss_dssp SSCEEEETTSEEEEEEEESS-------SCEEEEEGGGTEE------------------------EE---ECBTCCEEEEE
T ss_pred cceEEEecCCEEEEEEEECc-------ccceeeecccCce------------------------EE---ecCCceeEEEE
Confidence 34689999999999999875 4566555433322 22 33466667889
Q ss_pred EcCCCeeeEEeecchhhh-hcCcEEEEe
Q 016030 341 VADNPGAWAFHCHIEPHF-HIGMGVVLA 367 (396)
Q Consensus 341 ~adnpG~w~~HCHi~~H~-~~GM~~~~~ 367 (396)
.++.||.+...|--.--. ...|-..+.
T Consensus 216 ~~~~~G~y~g~Cse~CG~~H~~M~~~v~ 243 (262)
T 2gsm_B 216 RAEREGIFFGQCSELCGISHAYMPITVK 243 (262)
T ss_dssp ECCSCEEEEECCCSCCSTTGGGCCEEEE
T ss_pred ecCCcEEEEEEChHhcccCcccCeEEEE
Confidence 999999999999865443 234544443
No 139
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=56.44 E-value=4.9 Score=31.68 Aligned_cols=59 Identities=19% Similarity=0.383 Sum_probs=33.6
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|.+++|. |.+. +|++.+.+ |. .|.....+.+.+||.+.+-+ ++ +| .|+..
T Consensus 19 ~P~~i~V~~GdtV~f~--~~~~---------~H~v~~~~-~~---~p~~~~~~~~~pG~t~~~tF--~~-~G-~y~y~ 77 (123)
T 1paz_A 19 EPAYIKANPGDTVTFI--PVDK---------GHNVESIK-DM---IPEGAEKFKSKINENYVLTV--TQ-PG-AYLVK 77 (123)
T ss_dssp ESSEEEECTTCEEEEE--ESSS---------SCCCEECT-TC---SCTTCCCCBCCTTCCEEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCC---------CeEEEEec-cc---CCCCccceecCCCCEEEEEe--CC-CE-EEEEE
Confidence 3568999999998765 4442 36665431 00 01001123356899877655 43 43 88764
No 140
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=55.83 E-value=3.6 Score=32.72 Aligned_cols=59 Identities=20% Similarity=0.371 Sum_probs=35.7
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|.+++|.+-|. +|+++..+ +. .|-....+.+.+||.+.+-+ ++ +| .|+..
T Consensus 21 ~P~~i~V~~GDtVtf~n~~~-----------~H~v~~~~--~~--~P~g~~~f~s~pGet~s~TF--~~-pG-~y~y~ 79 (127)
T 3tu6_A 21 EPAVIRAQPGDTVTFVAKDK-----------GHNSALMK--GG--APEGAETWKGKINEEITVTL--SK-PG-VYMYQ 79 (127)
T ss_dssp ESSEEEECTTCEEEEECSSS-----------SCCCEECT--TC--SCTTCCCCBCCTTCCCEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEEECCC-----------CceEEEcc--Cc--CCCCccceecCCCCEEEEEe--CC-Ce-EEEEE
Confidence 46789999999987765542 46665432 21 12111234457899888776 33 44 88764
No 141
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=51.21 E-value=43 Score=26.43 Aligned_cols=46 Identities=24% Similarity=0.477 Sum_probs=25.9
Q ss_pred eEEEEEEecCccce------EEEEEeCceeEEEEeCCcee-eeeEeceEEecCCceEEE
Q 016030 58 TYRLRIASTTALAS------LNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSV 109 (396)
Q Consensus 58 ~yRlRlINa~~~~~------~~~sId~h~l~VIa~DG~~v-~P~~v~~l~i~~GqRyDV 109 (396)
.|++||-|.+.... +.+.=.+.....|.-+|+-= +|. |.|||.|.-
T Consensus 32 aY~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~------L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPW------LRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCE------ECTTCEEEE
T ss_pred EEEEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCc------CCCCCceEE
Confidence 48899999987532 22221223444455555421 354 888987654
No 142
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=50.13 E-value=39 Score=26.61 Aligned_cols=13 Identities=15% Similarity=0.350 Sum_probs=10.3
Q ss_pred eEEEEEEecCccc
Q 016030 58 TYRLRIASTTALA 70 (396)
Q Consensus 58 ~yRlRlINa~~~~ 70 (396)
.|++||-|.+...
T Consensus 31 aY~I~I~N~~~~~ 43 (126)
T 1xvs_A 31 AYLITIKNLSSQT 43 (126)
T ss_dssp EEEEEEEECSSSC
T ss_pred EEEEEEEECCCCC
Confidence 4889999998753
No 143
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=49.88 E-value=49 Score=27.46 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=39.5
Q ss_pred ceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 48 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 48 ~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
+..+.|+.|+++||++-|.. -...|.|++..++ +.+-||+.-.+.+.+++. | .|+.+
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~D--ViHsf~IP~lgik----------------~da~PG~~n~~~~~~~kp-G-~y~g~ 148 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKRP-G-EYRII 148 (168)
T ss_dssp SSSEEEETTSEEEEEEECSS--SCEEEEETTSSCE----------------EEECTTBCEEEEEECCSC-E-EEEEE
T ss_pred cCEEEEeCCCeEEEEEecCC--ceEEEEECCCCeE----------------EEecCCceeEEEEEeCCC-E-EEEEE
Confidence 44578899999999988864 3445566655432 345688888888888774 3 88775
No 144
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=49.43 E-value=5.9 Score=31.22 Aligned_cols=59 Identities=17% Similarity=0.385 Sum_probs=34.3
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|.+++| +|.+. +|++.+.+ + ..|-....+.+.+||.+.+-+ ++ +| .|+..
T Consensus 19 ~P~~i~V~~GdtV~f--~n~~~---------~H~v~~~~--~--~~p~~~~~~~~~pG~t~~~tF--~~-~G-~y~y~ 77 (123)
T 1pmy_A 19 DPALVRLKPGDSIKF--LPTDK---------GHNVETIK--G--MAPDGADYVKTTVGQEAVVKF--DK-EG-VYGFK 77 (123)
T ss_dssp ESSEEEECTTCEEEE--ECSSS---------SCCCEECT--T--SSCTTCCCCBCCTTSCEEEEC--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEE--EECCC---------CcEEEEec--c--cCCCCccceecCCCCEEEEEe--CC-Ce-EEEEE
Confidence 456899999999766 45542 46665531 1 001111223457999887665 33 43 88764
No 145
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=48.64 E-value=39 Score=26.99 Aligned_cols=46 Identities=22% Similarity=0.264 Sum_probs=24.2
Q ss_pred eEEEEEEecCccceEEEE----E-e-CceeEEEEeCCcee-eeeEeceEEecCCceEEE
Q 016030 58 TYRLRIASTTALASLNLA----V-K-NHKMVVVEADGNYV-QPFEVDDMDIYSGESYSV 109 (396)
Q Consensus 58 ~yRlRlINa~~~~~~~~s----I-d-~h~l~VIa~DG~~v-~P~~v~~l~i~~GqRyDV 109 (396)
.|++||-|.+.....-++ | | +-....|.-+|+-= +| .|.|||.|.-
T Consensus 31 aY~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP------~L~PGe~F~Y 83 (134)
T 1tza_A 31 SYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETP------TIPPNTAYQY 83 (134)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCC------EECTTEEEEE
T ss_pred EEEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCC------cCCCCCceEE
Confidence 488999999875321111 1 1 22333334444311 34 4888887654
No 146
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=47.54 E-value=9.7 Score=29.88 Aligned_cols=59 Identities=24% Similarity=0.437 Sum_probs=34.7
Q ss_pred CceEEEEcCCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEE
Q 016030 47 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 124 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir 124 (396)
.|..++|++|++++|+ |.+. +|.+.+.+ | .+ |-....+.+.+|+.+.+-+ ++ +| .|+..
T Consensus 19 ~P~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~-~~-p~~~~~~~~~~g~t~~~tF--~~-~G-~y~y~ 77 (122)
T 2ux6_A 19 EPASLKVAPGDTVTFI--PTDK---------GHNVETIK--G-MI-PDGAEAFKSKINENYKVTF--TA-PG-VYGVK 77 (122)
T ss_dssp ESSEEEECTTEEEEEE--ESSS---------SCCCEECT--T-CS-CTTCCCCBCCTTCCEEEEE--CS-CE-EEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCC---------CcEEEEcc--c-cc-CCCcceeecCCCCEEEEEe--CC-CE-EEEEE
Confidence 3568999999998775 5442 46665543 1 11 1111223457899887766 33 43 78764
No 147
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=46.96 E-value=42 Score=29.31 Aligned_cols=72 Identities=15% Similarity=0.295 Sum_probs=48.7
Q ss_pred cceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEE
Q 016030 261 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 340 (396)
Q Consensus 261 ~~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf 340 (396)
.+.+.++.|+.|++.+.+.| .-|.|.+-..... .| +-||..-.+.|
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D-------ViHsf~vP~lg~K------------------------~D---aiPGr~n~~~~ 184 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED-------VLHSWAVPSLGLK------------------------TD---AIPGRLNQTTL 184 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS-------SCEEEEEGGGTEE------------------------EE---ECTTCCEEEEE
T ss_pred CceEEEecCCEEEEEEEeCc-------ccceeeecccCcE------------------------EE---ecCCceEEEEE
Confidence 35689999999999999876 4566555433222 22 23455667789
Q ss_pred EcCCCeeeEEeecchhhhhc-CcEEEE
Q 016030 341 VADNPGAWAFHCHIEPHFHI-GMGVVL 366 (396)
Q Consensus 341 ~adnpG~w~~HCHi~~H~~~-GM~~~~ 366 (396)
.++.||.+...|.-.--... .|-..+
T Consensus 185 ~~~~~G~y~g~Cse~CG~~Hs~M~~~v 211 (227)
T 1v54_B 185 MSSRPGLYYGQCSEICGSNHSFMPIVL 211 (227)
T ss_dssp CCSSCEEEEECCCSCCSTTGGGCCEEE
T ss_pred ecCCcEEEEEEehhhcccccccCeEEE
Confidence 99999999999986544333 344444
No 148
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=43.51 E-value=89 Score=26.69 Aligned_cols=57 Identities=11% Similarity=0.147 Sum_probs=30.5
Q ss_pred EEEcCCCeEEEEEE-ecCccceEEEEEeCceeEEEEeCCceeeeeEec---eEEecC--CceEEEEEeeCC
Q 016030 51 LHVQPNKTYRLRIA-STTALASLNLAVKNHKMVVVEADGNYVQPFEVD---DMDIYS--GESYSVLLTTNQ 115 (396)
Q Consensus 51 ~~v~~G~~yRlRlI-Na~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~---~l~i~~--GqRyDVlv~~~~ 115 (396)
+.+++|++|+|.|- -++..+.+.+.|. .+|.+-..+.-+ .+.|.. -|+|++-+++..
T Consensus 98 i~L~~G~tY~lSFdAkA~~~r~i~v~i~--------~~~~~y~~Y~~~~~~~i~ltt~e~q~yt~~FT~~~ 160 (205)
T 3p6b_A 98 ITLEQGHTYTVRFTIWSDKSCRVYAKIG--------QMGEPYTEYWNNNWNPFNLTPGQKLTVEQNFTMNY 160 (205)
T ss_dssp EEECTTCEEEEEEEEEESSCEEEEEEEE--------ESSTTCCEEESSTTCCEEEBTTEEEEEEEEEECCS
T ss_pred EEecCCCEEEEEEEEEeCCCceEEEEEe--------cCCCCcceeccCccceEEecCCCCEEEEEEEEeCC
Confidence 66777787777664 3333444444443 233322222222 566754 466777777753
No 149
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=42.82 E-value=10 Score=30.20 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=17.0
Q ss_pred EEEEcCCCeEEEEEEecCccceE
Q 016030 50 ILHVQPNKTYRLRIASTTALASL 72 (396)
Q Consensus 50 ~~~v~~G~~yRlRlINa~~~~~~ 72 (396)
.|+|++||++||.+.|-+..+.|
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEEE
Confidence 47888888888888877655444
No 150
>2xjp_A Flocculin-5, flocculation protein FLO5; cell adhesion, greenbeard, PA14-domain, carbohydrate binding interaction; HET: MAN BMA; 0.95A {Saccharomyces cerevisiae} PDB: 2xjq_A 2xjr_A* 2xjs_A* 2xjt_A* 2xju_A* 2xjv_A*
Probab=38.75 E-value=74 Score=28.35 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=22.6
Q ss_pred eEEEEcCCCeEEEEEE--ecCccceEEEEEeCc
Q 016030 49 QILHVQPNKTYRLRIA--STTALASLNLAVKNH 79 (396)
Q Consensus 49 ~~~~v~~G~~yRlRlI--Na~~~~~~~~sId~h 79 (396)
.++.++.|+.|.|||. |....+.++|++..-
T Consensus 193 ~tv~LeAG~~YPIRI~Y~n~~~~A~L~~~~~~P 225 (258)
T 2xjp_A 193 GTVYMYAGYYYPLKVVYSNAVSWGTLPISVELP 225 (258)
T ss_dssp EEEEECTTCBEEEEEEEEECSSCEEECEEEECT
T ss_pred EEEEeeCCCEeeEEEEEEecCCCceEEEEEECC
Confidence 4688999999966655 777767777766543
No 151
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=37.28 E-value=63 Score=26.09 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=20.4
Q ss_pred EEEEcCCCeEEEEEE-ecCccceEEEEEe
Q 016030 50 ILHVQPNKTYRLRIA-STTALASLNLAVK 77 (396)
Q Consensus 50 ~~~v~~G~~yRlRlI-Na~~~~~~~~sId 77 (396)
-+.+++|++|+|+|- -++..+.+.+.|.
T Consensus 51 gi~L~~G~tY~lsF~A~as~~r~i~v~i~ 79 (149)
T 1gu3_A 51 GVAIEEGTTYTLRYTATASTDVTVRALVG 79 (149)
T ss_dssp EECBCTTCEEEEEEEEEESSCEECEEEEE
T ss_pred CEEEcCCCEEEEEEEEEeCCCcEEEEEEe
Confidence 377999999999986 4555566666554
No 152
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=35.09 E-value=47 Score=30.61 Aligned_cols=71 Identities=14% Similarity=0.059 Sum_probs=48.3
Q ss_pred eEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEc
Q 016030 263 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 342 (396)
Q Consensus 263 ~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~a 342 (396)
.+.++.|+.|++.+...| .-|.|.+-....+ .| +-||-...+.|.+
T Consensus 152 ~l~lP~g~~V~~~lTS~D-------ViHsf~IP~lg~k------------------------~D---aiPGr~n~~~~~~ 197 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-------VMNSFFIPRLGSQ------------------------IY---AMAGMQTRLHLIA 197 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-------SCEEEEEGGGTEE------------------------EE---ECBTSCEEEEEEC
T ss_pred eEEEeCCCEEEEEEEeCC-------ccceeeecccCcE------------------------Ee---ecCCcceeeEEec
Confidence 467899999999999875 4566655433322 22 3346667788999
Q ss_pred CCCeeeEEeecchhhhh-cCcEEEEe
Q 016030 343 DNPGAWAFHCHIEPHFH-IGMGVVLA 367 (396)
Q Consensus 343 dnpG~w~~HCHi~~H~~-~GM~~~~~ 367 (396)
+.||.+...|--.--.. ..|-..+.
T Consensus 198 ~~~G~y~g~CsE~CG~~Hs~M~~~v~ 223 (315)
T 1fft_B 198 NEPGTYDGISASYSGPGFSGMKFKAI 223 (315)
T ss_dssp CSCBCCEEBCCSCCSTTTTTCCEECC
T ss_pred CCCeEEEEeccccchhhHHhccceEE
Confidence 99999999998654433 34555443
No 153
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=34.19 E-value=63 Score=27.99 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=19.5
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 016030 47 APQILHVQPNKTYRLRIASTTA 68 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~ 68 (396)
.|+.++++||++..|||+..+.
T Consensus 64 tPPl~Rl~p~~~q~lRI~~~~~ 85 (218)
T 4ay0_A 64 TPPLFRLDAKQQNSLRIAQAGG 85 (218)
T ss_dssp ESSEEEECTTCEEEEEEEECSC
T ss_pred CCCeEEeCCCCceEEEEEecCC
Confidence 5789999999999999998765
No 154
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=34.03 E-value=44 Score=29.17 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=19.4
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 016030 47 APQILHVQPNKTYRLRIASTTA 68 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~ 68 (396)
.|+.|++++|+...|||+..+.
T Consensus 52 tPPlfRlep~~~q~lRIi~~~~ 73 (224)
T 3gfu_C 52 TPSFFKVKPNGQQTLRIIMASD 73 (224)
T ss_dssp ESSEEEECTTCEEEEEEEECSC
T ss_pred cCCeEEECCCCceEEEEEECCC
Confidence 4789999999999999998764
No 155
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=32.75 E-value=1.8e+02 Score=22.74 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=45.3
Q ss_pred EEcCCCeEEE--EEEecCccceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEEecC
Q 016030 52 HVQPNKTYRL--RIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 129 (396)
Q Consensus 52 ~v~~G~~yRl--RlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~~~~ 129 (396)
.+.+|+.+.| .+-|.|....-.+.+ .++ .||..+.-. .+.|.+|+.-.|-+.......|+|.|++....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~t~---~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYKNW---TVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEEEE---EEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEeeE---EeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 4678888755 567998765433332 222 277766433 34699999988888865444458999887664
No 156
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=31.43 E-value=34 Score=30.58 Aligned_cols=22 Identities=41% Similarity=0.530 Sum_probs=19.4
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 016030 47 APQILHVQPNKTYRLRIASTTA 68 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~ 68 (396)
.|+.++++||++..+||+..+.
T Consensus 83 tPPl~rl~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 83 TPAVTRVEPNGGAVLRIAYLKA 104 (257)
T ss_dssp ESSEEEECTTEEEEEEEEECCC
T ss_pred cCCEEEECCCCceEEEEEECCC
Confidence 5789999999999999998765
No 157
>3k4z_A Glycoside hydrolase family 9; cellulase, CBHA, CBM4, IG-like, cellulosome, CBM, sugar binding protein; HET: CBI XGP; 2.11A {Clostridium thermocellum dsm 4150}
Probab=30.20 E-value=2e+02 Score=25.85 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=34.1
Q ss_pred EEEEcCCCeEEEEEE-ecCccceEEEEEeCceeEEEEeCCceeeeeEec---eEEecC--CceEEEEEeeCC
Q 016030 50 ILHVQPNKTYRLRIA-STTALASLNLAVKNHKMVVVEADGNYVQPFEVD---DMDIYS--GESYSVLLTTNQ 115 (396)
Q Consensus 50 ~~~v~~G~~yRlRlI-Na~~~~~~~~sId~h~l~VIa~DG~~v~P~~v~---~l~i~~--GqRyDVlv~~~~ 115 (396)
-+.+++|++|+|.|- -++..+.+.+.|.+ .|.+-..+..+ .+.|.+ -|+|++-+++..
T Consensus 76 gi~L~~G~tY~lSF~akAs~~r~i~v~i~~--------~~~~y~~y~~~~~~~v~lt~~e~q~yt~~FT~~~ 139 (289)
T 3k4z_A 76 GLTLEQGHTYRVRLKIWADASCKVYIKIGQ--------MGEPYAEYWNNKWSPYTLTAGKVLEIDETFVMDK 139 (289)
T ss_dssp EEEECTTCEEEEEEEEEESSCEEEEEEEEE--------SSTTCCEEESTTTCCEEECTTCCEEEEEEEECCS
T ss_pred CEEecCCCEEEEEEEEEeCCCccEEEEEec--------CCCCceeeccCcceeEEecCCCCEEEEEEEEcCC
Confidence 367888899988775 33444555444432 22222222323 577764 567888888854
No 158
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=29.46 E-value=47 Score=29.29 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=19.4
Q ss_pred CceEEEEcCCCeEEEEEEecCc
Q 016030 47 APQILHVQPNKTYRLRIASTTA 68 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~~ 68 (396)
.|+.|+++||++..|||+..+.
T Consensus 72 tPPlfRlep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 72 TPPLFRLDGQQSSRLRIVRTGG 93 (239)
T ss_dssp ESSEEEECTTEEEEEEEEECSC
T ss_pred cCCeEEECCCCceEEEEEECCC
Confidence 5789999999999999998765
No 159
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=27.97 E-value=2e+02 Score=21.76 Aligned_cols=68 Identities=10% Similarity=0.192 Sum_probs=46.3
Q ss_pred CCCeEEEEEEecCccceEEEEEeCceeEEEEeCCceeeee--E-eceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 55 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF--E-VDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 55 ~G~~yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v~P~--~-v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
.+-..+..+.|-+.. ...|. -+|.-+..||-.|.+. . =..+.|.++|+..|--.+......+|.|.++
T Consensus 34 ~nG~l~v~v~~~s~~-~~~l~---Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~~i~~vap~~~A~~fRl~ir 104 (107)
T 4gio_A 34 SNGYLEFEVILRSTF-AKDVI---YKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILRKLASDTRANDFRLEIK 104 (107)
T ss_dssp TTSCEEEEEEECCSS-CEEEE---EEEEEECTTSCBCCSSCCCCCEEEEECTTCCEEEEEECSSTTCCEEEEEEE
T ss_pred cCCEEEEEEEecCCC-ceEEE---EEEEEECCCCCCcCCCCCCCCEEEEEcCCCeEEEEEECCCCCeEEEEEEEE
Confidence 333345555555543 22222 5788999999999653 2 3689999999999999887765557877654
No 160
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=27.96 E-value=1.3e+02 Score=22.23 Aligned_cols=56 Identities=18% Similarity=0.157 Sum_probs=42.2
Q ss_pred EEEEcCCCeEEEEEEecCccceEEEEEeCc-eeEEEEeCCceeeeeEeceEEecCCceEEE
Q 016030 50 ILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADGNYVQPFEVDDMDIYSGESYSV 109 (396)
Q Consensus 50 ~~~v~~G~~yRlRlINa~~~~~~~~sId~h-~l~VIa~DG~~v~P~~v~~l~i~~GqRyDV 109 (396)
.+... |.+--+-++-.|. +.|+-+.. .|+||+-.-...-|-..+...+.+||.++|
T Consensus 17 ~~~~~-G~~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~V 73 (94)
T 2oyz_A 17 GFNQH-GQDVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDV 73 (94)
T ss_dssp EEEET-TEEEEEEEECSEE---EEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEE
T ss_pred EEEeC-CCCEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEE
Confidence 56777 8888888887773 78888865 589988766655566667788888887765
No 161
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=27.95 E-value=1.2e+02 Score=23.17 Aligned_cols=47 Identities=9% Similarity=0.070 Sum_probs=37.5
Q ss_pred eeEEEEeCCceeeee-Ee-ceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 80 KMVVVEADGNYVQPF-EV-DDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 80 ~l~VIa~DG~~v~P~-~v-~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
+|.-+..+|-.+.|. .. ..+.|.++|+..|-..+......+|.|..+
T Consensus 59 rf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~vapn~~A~~fRlylr 107 (112)
T 3o0l_A 59 KFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTALSPNATAVRCELYVR 107 (112)
T ss_dssp EEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEEECSSTTCCEEEEEEE
T ss_pred EEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEEECCCCCeEEEEEEEh
Confidence 578888999999775 44 779999999999999887765557877654
No 162
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=26.89 E-value=71 Score=27.69 Aligned_cols=21 Identities=29% Similarity=0.553 Sum_probs=19.0
Q ss_pred CceEEEEcCCCeEEEEEEecC
Q 016030 47 APQILHVQPNKTYRLRIASTT 67 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~ 67 (396)
.|+.++++||++..|||+..+
T Consensus 62 tPPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 62 MPPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp ESSEEEECTTCEEEEEEEECC
T ss_pred eCCEEEECCCCceEEEEEECC
Confidence 578999999999999999877
No 163
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=26.08 E-value=1.3e+02 Score=22.81 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=49.7
Q ss_pred EEEEcCCCeEEEEEEecCccceEEEEEeCc-eeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCCCCcceEEEEE
Q 016030 50 ILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 126 (396)
Q Consensus 50 ~~~v~~G~~yRlRlINa~~~~~~~~sId~h-~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~~~~~y~ir~~ 126 (396)
.|.+.-|.+--|-++-.| .|.|+-+.. .|+|++-.-...-|-..+...+..||.++| .++ ..|.|++.
T Consensus 29 ~~~~~dG~~kTlGVm~PG---eY~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~V--pan----ssF~lkv~ 97 (106)
T 3eo6_A 29 SVILADGSMHSLTLLHPG---VYTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVI--PAN----QSYRLEVM 97 (106)
T ss_dssp EEEETTSCEEEEEEECSE---EEEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEE--CSS----SCEEEEEE
T ss_pred EEEeCCCCeEEEEEEeee---EEEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEE--CCC----CcEEEEEC
Confidence 566777888888888877 578877765 589988776666677778888889998775 222 36777664
No 164
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=25.80 E-value=65 Score=27.56 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=18.8
Q ss_pred CceEEEEcCCCeEEEEEEe-cC
Q 016030 47 APQILHVQPNKTYRLRIAS-TT 67 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlIN-a~ 67 (396)
.|+.++++||++..|||+. .+
T Consensus 51 tPPl~rl~p~~~q~lRI~~~~~ 72 (205)
T 1klf_A 51 TPPLFAMKGKKENTLRILDATN 72 (205)
T ss_dssp ESSEEEECSSEEEEEEEEECSC
T ss_pred cCCeEEECCCCceEEEEEecCC
Confidence 5789999999999999998 66
No 165
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=25.40 E-value=61 Score=27.75 Aligned_cols=21 Identities=33% Similarity=0.534 Sum_probs=18.3
Q ss_pred CceEEEEcCCCeEEEEEE-ecC
Q 016030 47 APQILHVQPNKTYRLRIA-STT 67 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlI-Na~ 67 (396)
.|+.++++||++..|||+ ..+
T Consensus 51 tPPl~rl~p~~~q~lRI~~~~~ 72 (206)
T 1l4i_A 51 TPPLFSMQGKKENTLRIIDATN 72 (206)
T ss_dssp ESSEEEEESSEEEEEEEEECCT
T ss_pred cCCeEEECCCCceEEEEEecCC
Confidence 578999999999999999 654
No 166
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=24.92 E-value=68 Score=23.63 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=36.3
Q ss_pred EcCCCeEEEEEEecCc-cceEEEEEeCceeEEEEeCCceeeeeEeceEEecCCceEEEEEeeCCC-CCcceEEEEEe
Q 016030 53 VQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISAGV 127 (396)
Q Consensus 53 v~~G~~yRlRlINa~~-~~~~~~sId~h~l~VIa~DG~~v~P~~v~~l~i~~GqRyDVlv~~~~~-~~~~y~ir~~~ 127 (396)
.+||++++||++--.. .....-. --.++|...+|..+.-... ......-++.-+..... ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~p~~~~--~~~v~l~dp~g~~v~~~~~---~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHPLNEL--IPLVYIQDPKGNRIAQWQS---FQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCBCCCE--EEEEEEECTTSCEEEEEEE---EECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCcCCCCC--ceEEEEECCCCCEEEEEEe---ecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 5899999999774322 1211100 0135566666665533211 11223345555555443 34589988764
No 167
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=24.90 E-value=54 Score=28.38 Aligned_cols=21 Identities=19% Similarity=0.512 Sum_probs=19.0
Q ss_pred CceEEEEcCCCeEEEEEEecC
Q 016030 47 APQILHVQPNKTYRLRIASTT 67 (396)
Q Consensus 47 ~~~~~~v~~G~~yRlRlINa~ 67 (396)
.|+.++++||++..|||+..+
T Consensus 53 tPPl~rl~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 53 TPPVQRLEPGAKSMVRLSTTP 73 (218)
T ss_dssp ECSEEEECTTCEEEEEEEECG
T ss_pred cCCeEEECCCCceEEEEEecC
Confidence 578999999999999999877
No 168
>4gq7_A Flocculin, LG-FLO1P; carbohydrate binding domain, PA14 domain, sugar binding PROT; HET: NAG; 2.53A {Saccharomyces pastorianus}
Probab=22.67 E-value=80 Score=27.47 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=23.8
Q ss_pred eEEEEcCCCeEEEEE--EecCccceEEEEEeCce
Q 016030 49 QILHVQPNKTYRLRI--ASTTALASLNLAVKNHK 80 (396)
Q Consensus 49 ~~~~v~~G~~yRlRl--INa~~~~~~~~sId~h~ 80 (396)
.++.++.|+.|-||| .|+...+.++|+|-.-.
T Consensus 158 ~tv~L~aG~yYPIRI~Y~n~~g~A~l~f~~~~P~ 191 (224)
T 4gq7_A 158 GSTYMYAGYYYPIKIVYSNAKALARLPVSVVLPD 191 (224)
T ss_dssp EEEEECTTCBEEEEEEEEECSSCEEECEEEECTT
T ss_pred EEEEEeCCCEeeEEEEEEeCCCCeEEEEEEECCC
Confidence 367899999996555 58888888888775443
No 169
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=22.22 E-value=93 Score=23.96 Aligned_cols=32 Identities=16% Similarity=0.524 Sum_probs=27.5
Q ss_pred EEEcCCCeeeEEeecchhhhhcCcEEEE-eecc
Q 016030 339 RFVADNPGAWAFHCHIEPHFHIGMGVVL-ALGV 370 (396)
Q Consensus 339 rf~adnpG~w~~HCHi~~H~~~GM~~~~-~~~~ 370 (396)
.|..+.+|...|-|=...|=..||.+.+ .|..
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~ 105 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGA 105 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECC
Confidence 4567889999999999999999999888 6654
No 170
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=21.94 E-value=85 Score=22.18 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=17.0
Q ss_pred EEEeCceeEEEEeCCceeeeeEe
Q 016030 74 LAVKNHKMVVVEADGNYVQPFEV 96 (396)
Q Consensus 74 ~sId~h~l~VIa~DG~~v~P~~v 96 (396)
+.+++..|+|.++|+.-++-+.+
T Consensus 56 v~~~~~~f~V~~~~~~rI~~v~v 78 (81)
T 3lae_A 56 CEIDGLLITILEVGDNMIKQAKV 78 (81)
T ss_dssp EEETTEEEEEEEEETTEEEEEEE
T ss_pred EEECCEEEEEEEeeCCEEEEEEE
Confidence 45678899999999987754443
No 171
>4asl_A EPA1P; cell adhesion, lectin, tissue invasion, pathogenicity; HET: GAL NGA; 1.24A {Candida glabrata} PDB: 4af9_A* 4afc_A* 4afa_A* 4afb_A* 4a3x_A*
Probab=21.93 E-value=93 Score=27.45 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=22.3
Q ss_pred eEEEEcCCCeEEEEE--EecCccceEEEEEe
Q 016030 49 QILHVQPNKTYRLRI--ASTTALASLNLAVK 77 (396)
Q Consensus 49 ~~~~v~~G~~yRlRl--INa~~~~~~~~sId 77 (396)
..+.+++|+.|.||| .|++....+.|++.
T Consensus 195 ~~v~L~aG~~Ypiri~y~n~~g~~~l~~~~~ 225 (259)
T 4asl_A 195 LTVHLDAGVYYPIRLFYNNREYDGALSFTFK 225 (259)
T ss_dssp EEEEECTTCBEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEecCCCEEEEEEEEEeCCCCcEEEEEEE
Confidence 368899999986665 58887778887774
No 172
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=20.83 E-value=1.7e+02 Score=25.16 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=22.0
Q ss_pred EEEEEecCccceEEEEEeCceeEEEEeCCcee
Q 016030 60 RLRIASTTALASLNLAVKNHKMVVVEADGNYV 91 (396)
Q Consensus 60 RlRlINa~~~~~~~~sId~h~l~VIa~DG~~v 91 (396)
++++.|+|....+.++ +..+..+..|+.++
T Consensus 109 ~l~~~~aG~~~~~l~r--~g~~~~l~~~~~~l 138 (242)
T 3pu9_A 109 SVLVTRNSEVPMLLGR--NGEFEQISESGGRI 138 (242)
T ss_dssp EEEEEEESCCCEEEEE--TTEEEEECCCCCCB
T ss_pred EEEEEeCCCCcEEEEE--CCEEEEeCCCCccc
Confidence 5889999987776655 45677777777665
No 173
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=20.24 E-value=1.4e+02 Score=25.52 Aligned_cols=46 Identities=13% Similarity=0.134 Sum_probs=26.5
Q ss_pred EEEEEEecCccceEEEEEeCceeEEEEeCCcee---e--eeEeceEEecCCce
Q 016030 59 YRLRIASTTALASLNLAVKNHKMVVVEADGNYV---Q--PFEVDDMDIYSGES 106 (396)
Q Consensus 59 yRlRlINa~~~~~~~~sId~h~l~VIa~DG~~v---~--P~~v~~l~i~~GqR 106 (396)
-+++++|+|..+.+.++ +.++..+..++.++ + .+...++.|.+|.+
T Consensus 105 ~~l~~~~aG~~~~~l~r--~g~~~~l~~~~~~lG~~~~~~~~~~~~~l~~GD~ 155 (242)
T 3t91_A 105 ASCKFLKVGSTPSFIKR--GDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDL 155 (242)
T ss_dssp CEEEEEEESCCCEEEEE--TTEEEECCCC-----CCCTTCEEEEEEECCTTCE
T ss_pred CEEEEEcCCCCceEEEE--CCEEEEecCCCceeEecCCCcceEEEEEeCCCCE
Confidence 35999999998887665 45666666666554 1 23344455555544
No 174
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=24.38 E-value=24 Score=32.93 Aligned_cols=63 Identities=22% Similarity=0.361 Sum_probs=43.6
Q ss_pred ceEEeecCCEEEEEEecCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 016030 262 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 341 (396)
Q Consensus 262 ~~~~~~~g~~v~~vi~N~~~~~~~~~~~HP~HLHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~~~irf~ 341 (396)
+.+.++.|+.|++.+...| .-|. |+|-+.| ...| +-||....+.|.
T Consensus 141 n~l~~P~~~~v~~~~ts~D-------ViHs-------f~vp~~~-----------------~k~d---~~PG~~~~~~~~ 186 (337)
T 2yev_B 141 NELVLPAGVPVELEITSKD-------VIHS-------FWVPGLA-----------------GKRD---AIPGQTTRISFE 186 (337)
Confidence 3478899999999999875 3444 4444432 1233 224566678899
Q ss_pred cCCCeeeEEeecchhhh
Q 016030 342 ADNPGAWAFHCHIEPHF 358 (396)
Q Consensus 342 adnpG~w~~HCHi~~H~ 358 (396)
++.||.+...|--.--.
T Consensus 187 ~~~~G~y~g~c~e~cG~ 203 (337)
T 2yev_B 187 PKEPGLYYGFCAELCGA 203 (337)
Confidence 99999999999865444
Done!