Your job contains 1 sequence.
>016032
MKPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG
NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY
GMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC
GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL
DSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTG
QLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKEEMKIIVCGK
ADKKQKHKFGDESEDSDDDTSKLKRKNVRSKKSRKS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016032
(396 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178808 - symbol:DDB2 "AT5G58760" species:3702... 1541 3.7e-158 1
UNIPROTKB|Q5ZJL7 - symbol:DDB2 "DNA damage-binding protei... 455 4.5e-43 1
UNIPROTKB|F1NDS8 - symbol:DDB2 "DNA damage-binding protei... 447 3.2e-42 1
MGI|MGI:1355314 - symbol:Ddb2 "damage specific DNA bindin... 410 2.6e-38 1
UNIPROTKB|Q0VBY8 - symbol:DDB2 "DNA damage-binding protei... 403 1.5e-37 1
UNIPROTKB|Q92466 - symbol:DDB2 "DNA damage-binding protei... 392 2.1e-36 1
UNIPROTKB|E2R0N2 - symbol:DDB2 "Uncharacterized protein" ... 381 3.1e-35 1
ZFIN|ZDB-GENE-050419-169 - symbol:ddb2 "damage-specific D... 377 8.3e-35 1
MGI|MGI:1926186 - symbol:Wdr76 "WD repeat domain 76" spec... 270 6.9e-22 1
ZFIN|ZDB-GENE-030131-4513 - symbol:wdr76 "WD repeat domai... 245 1.9e-18 1
TAIR|locus:2025762 - symbol:DRS1 "AT1G80710" species:3702... 203 1.6e-13 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 123 1.7e-11 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 173 4.0e-10 1
RGD|1310164 - symbol:Ddb2 "damage specific DNA binding pr... 122 5.1e-09 2
DICTYBASE|DDB_G0269388 - symbol:corB "coronin 7" species:... 119 6.2e-08 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 98 8.0e-08 2
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 150 1.4e-07 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 114 1.7e-07 2
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 154 1.8e-07 1
UNIPROTKB|O14727 - symbol:APAF1 "Apoptotic protease-activ... 152 3.0e-07 1
CGD|CAL0004044 - symbol:orf19.268 species:5476 "Candida a... 137 3.0e-07 2
UNIPROTKB|Q5AEK0 - symbol:RAD28 "Putative uncharacterized... 137 3.0e-07 2
CGD|CAL0002120 - symbol:orf19.3862 species:5476 "Candida ... 143 3.7e-07 1
CGD|CAL0000444 - symbol:PGA63 species:5476 "Candida albic... 150 5.0e-07 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 146 5.2e-07 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 146 5.2e-07 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 101 5.4e-07 2
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 149 6.4e-07 1
DICTYBASE|DDB_G0276481 - symbol:ercc8 "DNA excision repai... 85 7.0e-07 3
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 148 8.2e-07 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 97 8.2e-07 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 97 8.5e-07 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 144 9.0e-07 2
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 147 1.1e-06 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 97 1.1e-06 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 97 1.1e-06 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 94 1.3e-06 3
UNIPROTKB|E1BS49 - symbol:APAF1 "Uncharacterized protein"... 146 1.4e-06 1
UNIPROTKB|E1BT84 - symbol:WDR33 "Uncharacterized protein"... 146 1.5e-06 1
UNIPROTKB|F1LT09 - symbol:Wdr33 "Protein Wdr33" species:1... 146 1.5e-06 1
MGI|MGI:1921570 - symbol:Wdr33 "WD repeat domain 33" spec... 146 1.5e-06 1
UNIPROTKB|E1BCT7 - symbol:WDR33 "Uncharacterized protein"... 146 1.5e-06 1
UNIPROTKB|F1PV59 - symbol:WDR33 "Uncharacterized protein"... 146 1.5e-06 1
UNIPROTKB|Q9C0J8 - symbol:WDR33 "pre-mRNA 3' end processi... 146 1.5e-06 1
UNIPROTKB|I3LTD5 - symbol:WDR33 "Uncharacterized protein"... 146 1.6e-06 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 96 1.7e-06 2
SGD|S000004980 - symbol:YNL035C "Protein of unknown funct... 138 1.9e-06 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 119 2.2e-06 2
TAIR|locus:2121164 - symbol:AT4G38480 "AT4G38480" species... 116 2.3e-06 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 99 2.5e-06 2
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 142 3.7e-06 1
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 142 3.7e-06 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 105 3.9e-06 3
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 112 3.9e-06 2
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 121 4.4e-06 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 95 5.9e-06 2
UNIPROTKB|Q9GZS0 - symbol:DNAI2 "Dynein intermediate chai... 135 8.7e-06 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 136 9.9e-06 1
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 117 1.0e-05 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 91 1.1e-05 2
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 132 1.1e-05 1
UNIPROTKB|E1BPM9 - symbol:DNAI2 "Uncharacterized protein"... 133 1.5e-05 1
TAIR|locus:2037798 - symbol:PWP2 "AT1G15440" species:3702... 135 1.5e-05 1
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 132 1.6e-05 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 131 1.7e-05 1
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 97 1.7e-05 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 130 1.8e-05 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 130 1.8e-05 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 130 1.8e-05 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 130 1.8e-05 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 130 1.8e-05 1
ZFIN|ZDB-GENE-070410-46 - symbol:zgc:162235 "zgc:162235" ... 130 1.8e-05 2
MGI|MGI:1914587 - symbol:Cstf1 "cleavage stimulation fact... 130 1.8e-05 1
RGD|1309267 - symbol:Cstf1 "cleavage stimulation factor, ... 130 1.8e-05 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 126 2.0e-05 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 126 2.0e-05 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 126 2.0e-05 2
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 130 2.1e-05 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 130 2.1e-05 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 129 2.2e-05 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 129 2.2e-05 1
MGI|MGI:2685574 - symbol:Dnaic2 "dynein, axonemal, interm... 131 2.5e-05 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 128 3.0e-05 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 128 3.0e-05 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 86 3.1e-05 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 126 3.1e-05 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 125 3.4e-05 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 90 3.6e-05 2
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 133 3.6e-05 1
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 133 3.6e-05 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 126 3.7e-05 1
ZFIN|ZDB-GENE-030131-2958 - symbol:cstf1 "cleavage stimul... 127 3.9e-05 1
UNIPROTKB|E1BRJ9 - symbol:PAM16 "Coronin" species:9031 "G... 114 4.0e-05 2
UNIPROTKB|F1NP32 - symbol:PAM16 "Coronin" species:9031 "G... 114 4.0e-05 2
UNIPROTKB|E1BR57 - symbol:PAM16 "Coronin" species:9031 "G... 114 4.0e-05 2
MGI|MGI:1919241 - symbol:Ercc8 "excision repaiross-comple... 126 4.4e-05 1
UNIPROTKB|I3LLI7 - symbol:DNAI2 "Uncharacterized protein"... 128 4.8e-05 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 96 5.2e-05 2
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 124 5.7e-05 2
TAIR|locus:2132796 - symbol:AT4G35140 "AT4G35140" species... 97 6.4e-05 2
WARNING: Descriptions of 91 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2178808 [details] [associations]
symbol:DDB2 "AT5G58760" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0010224
"response to UV-B" evidence=IEP;IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001878 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50158 PROSITE:PS50294
SMART:SM00320 SMART:SM00343 UniPathway:UPA00143 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0016567
GO:GO:0010224 EMBL:AB020755 GO:GO:0080008 EMBL:BT010570
EMBL:AK175124 IPI:IPI00534441 RefSeq:NP_200684.2 UniGene:At.29266
ProteinModelPortal:Q6NQ88 SMR:Q6NQ88 IntAct:Q6NQ88 STRING:Q6NQ88
EnsemblPlants:AT5G58760.1 GeneID:835990 KEGG:ath:AT5G58760
GeneFarm:4662 TAIR:At5g58760 eggNOG:NOG266768 HOGENOM:HOG000272728
InParanoid:Q6NQ88 KO:K10140 OMA:PSREIVH PhylomeDB:Q6NQ88
ProtClustDB:CLSN2681109 Genevestigator:Q6NQ88 Uniprot:Q6NQ88
Length = 557
Score = 1541 (547.5 bits), Expect = 3.7e-158, P = 3.7e-158
Identities = 285/373 (76%), Positives = 330/373 (88%)
Query: 1 MKPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG 60
+KP +VIPDQV+CAVIRYHSRRVTCLEFHPT N+ILLSGDKKGQ+GVWDF KV EK VYG
Sbjct: 152 IKPKYVIPDQVHCAVIRYHSRRVTCLEFHPTKNNILLSGDKKGQIGVWDFGKVYEKNVYG 211
Query: 61 NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY 120
NIHS VNN+RF+PTND VY+ASSDGT+ TDLETG + +L+N+NP+GW G +W+MLY
Sbjct: 212 NIHSVQVNNMRFSPTNDDMVYSASSDGTIGYTDLETGTSSTLLNLNPDGWQGANSWKMLY 271
Query: 121 GMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC 180
GMDIN EKGVVL ADNFGFL+++D RTN+ +GE ILIH++GSKV GL CNP+QPELLLSC
Sbjct: 272 GMDINSEKGVVLAADNFGFLHMIDHRTNNSTGEPILIHKQGSKVCGLDCNPVQPELLLSC 331
Query: 181 GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS-GSKILTTSQDNRLRIWDSIFGN 239
GNDHFARIWD+R+L+ +SL DL HKRVVNSAYFSPS G+KILTT QDNR+RIWDSIFGN
Sbjct: 332 GNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDNRIRIWDSIFGN 391
Query: 240 LDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299
LD PSREIVHS+DFNRHLTPF+AEWDPKD SESL VIGRYISENYNG ALHPIDFID +
Sbjct: 392 LDLPSREIVHSNDFNRHLTPFKAEWDPKDTSESLIVIGRYISENYNGTALHPIDFIDASN 451
Query: 300 GQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKEEMKIIVC- 358
GQLVAEVMDPNITTI+PVNKLHPRDDVLASGSSRS+FIWRP++ +E+VE+K++ KII+C
Sbjct: 452 GQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRSLFIWRPQDNTEMVEEKKDKKIIICY 511
Query: 359 GKADKK-QKHKFG 370
G + KK +K K G
Sbjct: 512 GDSKKKGKKQKRG 524
>UNIPROTKB|Q5ZJL7 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0009411
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 GO:GO:0004842 GO:GO:0000209
GO:GO:0051865 eggNOG:NOG266768 KO:K10140 CTD:1643
HOGENOM:HOG000231440 HOVERGEN:HBG000713 OrthoDB:EOG40K7ZV
GO:GO:0006290 EMBL:AJ720417 IPI:IPI00735080 RefSeq:NP_001034390.1
UniGene:Gga.21424 ProteinModelPortal:Q5ZJL7 STRING:Q5ZJL7
GeneID:423185 KEGG:gga:423185 InParanoid:Q5ZJL7 NextBio:20825687
ArrayExpress:Q5ZJL7 Uniprot:Q5ZJL7
Length = 507
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 120/343 (34%), Positives = 181/343 (52%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--GNIHSCIVNNIRFNPTNDG 78
RRVTCLE+HPT+ + G K G + +WD Y+V K + G + +I+F+P
Sbjct: 125 RRVTCLEWHPTHPSTVAVGSKGGDIILWD-YEVLTKTCFIKGKGPGDSLGDIKFSPYEAV 183
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY-GMDINPEKGVVLVADNF 137
+Y AS DGT+S DLE G A+ +++ P+ H Y +D++ V+ DN
Sbjct: 184 KLYVASGDGTLSLQDLE-GRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNL 242
Query: 138 GFLYLVDARTNSRSGEAIL---IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
G + L+ S SGE I +H+K KV + N LL + D +IWD+R +
Sbjct: 243 GNVVLL-----STSGEEIWKLKLHKK--KVTHVEFNSRCEWLLATASVDQTVKIWDLRNI 295
Query: 195 -EAGSSLCDLPHKRVVNSAYFSPS-GSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHD 252
+ + L LPH + VN+AYFSP+ G+K+L+T Q N +R++ + P I H H
Sbjct: 296 KDKANFLHVLPHDKPVNAAYFSPTDGAKLLSTDQRNEIRVYSC--SDWTKPQHLIPHPHR 353
Query: 253 FNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDITTGQLVAEVMDP 309
+HLTP +A W P+ L V+GRY + G L +D D TG++V ++ DP
Sbjct: 354 QFQHLTPIKATWHPR---YDLIVVGRYPDPKFPGYTVNELRTVDIFDGNTGEMVCQLYDP 410
Query: 310 NITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKEE 352
N + I +NK +P D LASG +I IW + E+V +K+E
Sbjct: 411 NASGIISLNKFNPMGDTLASGMGFNILIW---SREEMVMKKQE 450
>UNIPROTKB|F1NDS8 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 GeneTree:ENSGT00510000047881
GO:GO:0006290 IPI:IPI00735080 EMBL:AADN02033477 EMBL:AADN02033478
Ensembl:ENSGALT00000013377 ArrayExpress:F1NDS8 Uniprot:F1NDS8
Length = 509
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 121/345 (35%), Positives = 181/345 (52%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--GNIHSCIVNNIRFNPTNDG 78
RRVTCLE+HPT+ + G K G + +WD Y+V K + G + +I+F+P
Sbjct: 125 RRVTCLEWHPTHPSTVAVGSKGGDIILWD-YEVLTKTCFIKGKGPGDSLGDIKFSPYEAV 183
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY-GMDINPEKGVVLVADNF 137
+Y AS DGT+S DLE G A+ +++ P+ H Y +D++ V+ DN
Sbjct: 184 KLYVASGDGTLSLQDLE-GRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNL 242
Query: 138 GFLYLVDARTNSRSGEAIL---IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
G + L+ S SGE I +H+K KV + N LL + D +IWD+R +
Sbjct: 243 GNVVLL-----STSGEEIWKLKLHKK--KVTHVEFNSRCEWLLATASVDQTVKIWDLRNI 295
Query: 195 -EAGSSLCDLPHKRVVNSAYFSPS-GSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHD 252
+ + L LPH + VN+AYFSP+ G+K+L+T Q N +R++ + P I H H
Sbjct: 296 KDKANFLHVLPHDKPVNAAYFSPTDGAKLLSTDQRNEIRVYSC--SDWTKPQHLIPHPHR 353
Query: 253 FNRHLTPF--RAEWDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDITTGQLVAEVM 307
+HLTP RA W P+ L V+GRY + G L +D D TG++V ++
Sbjct: 354 QFQHLTPIKARATWHPR---YDLIVVGRYPDPKFPGYTVNELRTVDIFDGNTGEMVCQLY 410
Query: 308 DPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKEE 352
DPN + I +NK +P D LASG +I IW + E+V +K+E
Sbjct: 411 DPNASGIISLNKFNPMGDTLASGMGFNILIW---SREEMVMKKQE 452
>MGI|MGI:1355314 [details] [associations]
symbol:Ddb2 "damage specific DNA binding protein 2"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1355314
GO:GO:0005634 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GO:GO:0004842 GO:GO:0000209 GO:GO:0051865 KO:K10140
CTD:1643 GeneTree:ENSGT00510000047881 HOGENOM:HOG000231440
HOVERGEN:HBG000713 OMA:NSAYFNP OrthoDB:EOG40K7ZV GO:GO:0006290
EMBL:AY027937 IPI:IPI00114927 RefSeq:NP_082395.2 UniGene:Mm.389334
ProteinModelPortal:Q99J79 SMR:Q99J79 STRING:Q99J79
PhosphoSite:Q99J79 PaxDb:Q99J79 PRIDE:Q99J79
Ensembl:ENSMUST00000028696 GeneID:107986 KEGG:mmu:107986
InParanoid:Q99J79 NextBio:359837 Bgee:Q99J79 CleanEx:MM_DDB2
Genevestigator:Q99J79 GermOnline:ENSMUSG00000002109 Uniprot:Q99J79
Length = 432
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 101/328 (30%), Positives = 170/328 (51%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--GNIHSCIVNNIRFNPTNDG 78
RR T L +HPT+ L G K G + +W+F + +K ++ G + ++FN N
Sbjct: 112 RRTTSLAWHPTHPSTLAVGSKGGDIMIWNF-GIKDKPIFLKGIGAGGSITGLKFNHLNTN 170
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
+A+S +GT D + G +++ V + + + W +D++ + VV+ DN G
Sbjct: 171 QFFASSMEGTTRLQDFK-G---NILRVYTSS-NSCKVW--FCSLDVSAKSRVVVTGDNMG 223
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
+ L+ T+ + + +H+K KV + NP LL + D +IWD+R+++
Sbjct: 224 HVILLS--TDGKELWNLRMHKK--KVAHVALNPCCDWLLATASIDQTVKIWDLRQIKGKD 279
Query: 199 S-LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL 257
S L LPH+ VN+A FSP G+++LTT Q+N +R++ + DSP I H H +HL
Sbjct: 280 SFLYSLPHRHPVNAACFSPDGARLLTTDQNNEIRVYSA--SQWDSPLNLISHPHRHFQHL 337
Query: 258 TPFRAEWDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDITTGQLVAEVMDPNITTI 314
TP +A W + +L V+GRY N L ID D ++G+++ ++ DP + I
Sbjct: 338 TPIKATWHSR---HNLIVVGRYPDPNLKSCVPYELRTIDVFDGSSGKMMCQLYDPGYSGI 394
Query: 315 SPVNKLHPRDDVLASGSSRSIFIWRPKE 342
+ +N+ +P D LAS I IW +E
Sbjct: 395 TSLNEFNPMGDTLASTMGYHILIWSQEE 422
>UNIPROTKB|Q0VBY8 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0009411
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 KO:K10140 EMBL:BC120440 IPI:IPI00711494
RefSeq:NP_001069256.1 UniGene:Bt.33161 ProteinModelPortal:Q0VBY8
STRING:Q0VBY8 Ensembl:ENSBTAT00000027965 GeneID:519357
KEGG:bta:519357 CTD:1643 GeneTree:ENSGT00510000047881
HOGENOM:HOG000231440 HOVERGEN:HBG000713 InParanoid:Q0VBY8
OMA:NSAYFNP OrthoDB:EOG40K7ZV NextBio:20872865 GO:GO:0006290
Uniprot:Q0VBY8
Length = 426
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 99/327 (30%), Positives = 166/327 (50%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79
RR T L +HPT+ L G K G + +W+F K + G + ++FNP N
Sbjct: 111 RRATSLAWHPTHPSTLAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQ 170
Query: 80 VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF 139
+ +S +GT D + G L + + W +D++ + VV+ DN G
Sbjct: 171 FFTSSMEGTTRLQDFK-GNTLRVFASSDTC----NVW--FCSLDVSVKSRVVVTGDNVGH 223
Query: 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSS 199
+ L++ + R + +H+K KV + NP LL + D +IWD+R++ SS
Sbjct: 224 VILLNM--DGRELWNLRMHKK--KVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSS 279
Query: 200 -LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT 258
L LPH+ VN+A+FSP G+++LTT Q + +R++ + D P I H H +HLT
Sbjct: 280 FLHSLPHRHPVNAAHFSPDGAQLLTTDQKSEIRVYSAC--QWDCPPSLIPHPHRHFQHLT 337
Query: 259 PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDI---TTGQLVAEVMDPNITTIS 315
P +A W P+ +L V+GRY N+ + H + ID+ ++G+++ ++ DP + I
Sbjct: 338 PIKASWHPR---YNLIVVGRYPDPNFKSCSPHELRTIDVFDGSSGKIMYQLYDPESSGIM 394
Query: 316 PVNKLHPRDDVLASGSSRSIFIWRPKE 342
+N+ +P D LAS I +W P++
Sbjct: 395 SLNEFNPMGDTLASVMGYHILVWSPED 421
>UNIPROTKB|Q92466 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9606
"Homo sapiens" [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009411 "response to UV" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003684 "damaged DNA binding"
evidence=TAS] [GO:0000718 "nucleotide-excision repair, DNA damage
removal" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006289
"nucleotide-excision repair" evidence=TAS] Reactome:REACT_216
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234 GO:GO:0005654
EMBL:CH471064 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003684 eggNOG:COG2319 GO:GO:0000209
GO:GO:0051865 GO:GO:0000718 PDB:3EI4 PDB:3I7L PDB:4E54 PDB:4E5Z
PDBsum:3EI4 PDBsum:3I7L PDBsum:4E54 PDBsum:4E5Z KO:K10140 CTD:1643
HOGENOM:HOG000231440 HOVERGEN:HBG000713 OMA:NSAYFNP
OrthoDB:EOG40K7ZV GO:GO:0006290 EMBL:U18300 EMBL:AB107037
EMBL:AB107038 EMBL:AB107039 EMBL:AB107040 EMBL:BT007139
EMBL:AY220533 EMBL:AK313262 EMBL:BC000093 IPI:IPI00021518
IPI:IPI00446284 IPI:IPI00549348 IPI:IPI00607674 IPI:IPI00607727
PIR:I38909 RefSeq:NP_000098.1 UniGene:Hs.700338
ProteinModelPortal:Q92466 SMR:Q92466 DIP:DIP-36670N IntAct:Q92466
STRING:Q92466 PhosphoSite:Q92466 DMDM:12230033 PaxDb:Q92466
PRIDE:Q92466 DNASU:1643 Ensembl:ENST00000256996
Ensembl:ENST00000378600 Ensembl:ENST00000378601
Ensembl:ENST00000378603 GeneID:1643 KEGG:hsa:1643 UCSC:uc001neb.2
UCSC:uc001nee.2 UCSC:uc009yli.1 GeneCards:GC11P047193
HGNC:HGNC:2718 HPA:CAB025912 MIM:278740 MIM:600811
neXtProt:NX_Q92466 Orphanet:276261 PharmGKB:PA27188
InParanoid:Q92466 PhylomeDB:Q92466 ChiTaRS:DDB2
EvolutionaryTrace:Q92466 GenomeRNAi:1643 NextBio:6758 Bgee:Q92466
CleanEx:HS_DDB2 Genevestigator:Q92466 GermOnline:ENSG00000134574
Uniprot:Q92466
Length = 427
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 98/328 (29%), Positives = 161/328 (49%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79
RR T L +HPT+ + G K G + +W+F K + G + ++FNP N
Sbjct: 112 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQ 171
Query: 80 VYAASSDGTVSCTDLETGLALSLMNVNP-NGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
YA+S +GT D + + + + N W +D++ +V+ DN G
Sbjct: 172 FYASSMEGTTRLQDFKGNILRVFASSDTINIW--------FCSLDVSASSRMVVTGDNVG 223
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
+ L++ + + + +H+K KV + NP L + D +IWD+R++ +
Sbjct: 224 NVILLNM--DGKELWNLRMHKK--KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA 279
Query: 199 S-LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL 257
S L LPH+ VN+A FSP G+++LTT Q + +R++ + D P I H H +HL
Sbjct: 280 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA--SQWDCPLGLIPHPHRHFQHL 337
Query: 258 TPFRAEWDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDITTGQLVAEVMDPNITTI 314
TP +A W P+ +L V+GRY N+ L ID D +G+++ ++ DP + I
Sbjct: 338 TPIKAAWHPR---YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGI 394
Query: 315 SPVNKLHPRDDVLASGSSRSIFIWRPKE 342
S +N+ +P D LAS I IW +E
Sbjct: 395 SSLNEFNPMGDTLASAMGYHILIWSQEE 422
>UNIPROTKB|E2R0N2 [details] [associations]
symbol:DDB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 KO:K10140 CTD:1643
GeneTree:ENSGT00510000047881 OMA:NSAYFNP GO:GO:0006290
EMBL:AAEX03011491 RefSeq:XP_540746.3 ProteinModelPortal:E2R0N2
Ensembl:ENSCAFT00000014057 GeneID:483626 KEGG:cfa:483626
NextBio:20857995 Uniprot:E2R0N2
Length = 427
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/328 (29%), Positives = 160/328 (48%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79
RR T L +HPT+ L G K G + +W+F K + G + ++FNP +
Sbjct: 112 RRATSLAWHPTHPSTLAVGSKGGDIMLWNFGMKDKPTFIKGIGAGGSITGLKFNPLDTNQ 171
Query: 80 VYAASSDGTVSCTDLETG-LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
+ +S +GT D + L + + N W +D++ +V+ DN G
Sbjct: 172 FFTSSMEGTTRLQDFKGNTLRVFTSSGTCNFW--------FCSLDVSARSRMVVTGDNVG 223
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
+ L++ + R + +H+K KV + NP L + D +IWD+R++ S
Sbjct: 224 HVILLNM--DGRELWNLRMHKK--KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKS 279
Query: 199 S-LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL 257
S L LPH VN+A FSP G+++LTT Q + LR++ + D P I H H +HL
Sbjct: 280 SFLHSLPHSHPVNAACFSPDGAQLLTTDQKSELRVYSA--SQWDYPPSLIPHPHRHFQHL 337
Query: 258 TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDI---TTGQLVAEVMDPNITTI 314
TP +A W P+ +L V+GRY N+ H + ID+ ++G+++ ++ DP + I
Sbjct: 338 TPIKATWHPR---YNLIVVGRYPDPNFKSCTPHELRTIDVFDGSSGKMMYQLYDPESSGI 394
Query: 315 SPVNKLHPRDDVLASGSSRSIFIWRPKE 342
+N+ +P D LAS I IW +E
Sbjct: 395 ISLNEFNPMGDTLASVMGYHILIWSQEE 422
>ZFIN|ZDB-GENE-050419-169 [details] [associations]
symbol:ddb2 "damage-specific DNA binding protein 2"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 ZFIN:ZDB-GENE-050419-169
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281 GO:GO:0016567
PDB:4A0K PDBsum:4A0K PDB:4A0L PDBsum:4A0L PDB:3EI1 PDB:3EI2
PDB:3EI3 PDB:4A08 PDB:4A09 PDB:4A0A PDB:4A0B PDBsum:3EI1
PDBsum:3EI2 PDBsum:3EI3 PDBsum:4A08 PDBsum:4A09 PDBsum:4A0A
PDBsum:4A0B eggNOG:NOG266768 KO:K10140 CTD:1643
GeneTree:ENSGT00510000047881 HOGENOM:HOG000231440
HOVERGEN:HBG000713 EMBL:BX942814 EMBL:BC110096 IPI:IPI00635387
IPI:IPI00845091 RefSeq:NP_001076530.1 UniGene:Dr.94422
IntAct:Q2YDS1 STRING:Q2YDS1 Ensembl:ENSDART00000060302
Ensembl:ENSDART00000100665 Ensembl:ENSDART00000147867
GeneID:100004133 KEGG:dre:100004133 InParanoid:Q2YDS1
EvolutionaryTrace:Q2YDS1 NextBio:20786125 Bgee:Q2YDS1
Uniprot:Q2YDS1
Length = 496
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 101/335 (30%), Positives = 164/335 (48%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK--IVYGNIHSCIVNNIRFNPTNDG 78
RRVT LE+HPT+ + G K G + +WD Y V K + G + ++FN N
Sbjct: 114 RRVTSLEWHPTHPTTVAVGSKGGDIILWD-YDVLNKTSFIQGMGPGDAITGMKFNQFNTN 172
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
++ +S G + D +G + + + W W +D++ + ++ D+ G
Sbjct: 173 QLFVSSIWGATTLRDF-SGSVIQVF-AKTDSWD---YWYCC--VDVSVSRQMLATGDSTG 225
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL-EAG 197
L L+ + E + H+ +KV NP L+ + D ++WD+R + +
Sbjct: 226 RLLLLGLDGHEIFKEKL--HK--AKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN 281
Query: 198 SSLCDLPHKRVVNSAYFSPSGS-KILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRH 256
S + ++PH++ VN+AYF+P+ S K+LTT Q N +R++ S + P + I+H H +H
Sbjct: 282 SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY--DWSKPDQIIIHPHRQFQH 339
Query: 257 LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISP 316
LTP +A W P L V GRY + ID D +G LV ++ DPN I
Sbjct: 340 LTPIKATWHPM---YDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIIS 396
Query: 317 VNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKE 351
+NK P DVLASG +I IW ++ V +K+
Sbjct: 397 LNKFSPTGDVLASGMGFNILIWNREDTLSSVNRKQ 431
>MGI|MGI:1926186 [details] [associations]
symbol:Wdr76 "WD repeat domain 76" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1926186 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AL928678 EMBL:AK020004 EMBL:BC094676
EMBL:BC117822 IPI:IPI00379204 IPI:IPI00674950 IPI:IPI00856332
RefSeq:NP_084510.2 UniGene:Mm.293284 ProteinModelPortal:A6PWY4
SMR:A6PWY4 DIP:DIP-59892N PhosphoSite:A6PWY4 PRIDE:A6PWY4
Ensembl:ENSMUST00000028676 Ensembl:ENSMUST00000099473
Ensembl:ENSMUST00000110602 Ensembl:ENSMUST00000110603 GeneID:241627
KEGG:mmu:241627 UCSC:uc008lzi.1 UCSC:uc012ccs.1 CTD:79968
eggNOG:NOG298412 GeneTree:ENSGT00510000048144 HOGENOM:HOG000081507
HOVERGEN:HBG079574 InParanoid:A6PWY4 OMA:GMVISED OrthoDB:EOG43BMNH
NextBio:385089 Bgee:A6PWY4 Genevestigator:A6PWY4 Uniprot:A6PWY4
Length = 622
Score = 270 (100.1 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 91/318 (28%), Positives = 154/318 (48%)
Query: 23 VTCLEFHPTNNHILLS-GDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTV 80
++ + HP+ L++ G K GQ+G+WD + SE +Y HS V+ + F+PTN +
Sbjct: 315 ISSVALHPSEVRTLVAAGAKSGQIGLWDLTQQSEDAMYVFYAHSRYVSCLSFSPTNPAHL 374
Query: 81 YAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFL 140
+ S DGT+ C D + + V N + P ++ L N + +LV G L
Sbjct: 375 LSLSYDGTLRCGDFSSAV---FEEVYRNEGNSPSSFDFL-----N-DSSSLLVGHWDGHL 425
Query: 141 YLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEA-GS 198
LVD RT S E + K+ +H +P+ + ++ G D ++D R L++ GS
Sbjct: 426 SLVDRRTPGTSYEKFF-NSSLEKIRTVHVHPLSRQYFVTAGLRD--VHVYDARFLKSRGS 482
Query: 199 S-LCDLP-HKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-HSHDFN 254
L L H + + SAYFSP +G++++TT D +LR++DS + P + H+
Sbjct: 483 QPLISLTEHSKSIASAYFSPVTGNRVVTTCADCKLRVFDSSSISSQLPLLSTIRHNTVTG 542
Query: 255 RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTI 314
R LT F+A WDPK E ++G + H +G+ V + + ++
Sbjct: 543 RWLTRFQAVWDPKQ--EDCFIVGS-MDHPRRVEVFHE-------SGKNVHSLWGECLVSV 592
Query: 315 SPVNKLHPRDDVLASGSS 332
++ +HP +LA G+S
Sbjct: 593 CSLSAVHPTRYILAGGNS 610
>ZFIN|ZDB-GENE-030131-4513 [details] [associations]
symbol:wdr76 "WD repeat domain 76" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 SMART:SM00320
ZFIN:ZDB-GENE-030131-4513 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00510000048144 EMBL:CR356246 IPI:IPI00770891
Ensembl:ENSDART00000075588 Bgee:E7FER1 Uniprot:E7FER1
Length = 535
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 80/273 (29%), Positives = 137/273 (50%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVW--DFYKVSEKIVYGNIHSCIVNNIRF 72
V++ R+ C FHP++N ++ +GDK G +G+W D + +V HS + + F
Sbjct: 242 VVKVVKERICCAAFHPSSNLLMAAGDKYGHLGLWRPDAEWGDDGVVCFEPHSRAITALAF 301
Query: 73 NPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMD-INPEKGVV 131
+ + AS DG+ DLE + + R+ L D ++ + +
Sbjct: 302 T-SQPCNLITASYDGSARSMDLEKAVFDEVY----------RSSSSLKSFDFLSSDCSTL 350
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRK-GSKVVGLHCNPIQPELLLSCGNDHFARIWD 190
L + G + +VD RT + S E++ H + + G+H +P+Q L F I+D
Sbjct: 351 LFGEWNGDVAIVDRRTGN-SCESL--HAMTAAPLRGVHVHPVQQHYFL-VAESSFVNIYD 406
Query: 191 IRRLEAGSS--LCDL-PHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDS--IFGNLDSPS 244
+R L+ +S +C+L H R +SA+FSP +GS++LTT D+ +R++DS I G++ + +
Sbjct: 407 LRHLKKRNSPAVCELYGHSRSTSSAFFSPLTGSRVLTTCMDDCIRVFDSSQIAGSIPALT 466
Query: 245 REIVHSHDFNRHLTPFRAEWDPKDPSESLAVIG 277
I H+ R L+ A WDPK + VIG
Sbjct: 467 -SIRHNMQTGRWLSRLCAVWDPKH--QECFVIG 496
>TAIR|locus:2025762 [details] [associations]
symbol:DRS1 "AT1G80710" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009414 "response to
water deprivation" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009414 eggNOG:COG2319 EMBL:AC011713
GO:GO:0080008 OMA:VFAIANM IPI:IPI00545447 PIR:E96839
RefSeq:NP_178186.1 UniGene:At.50057 ProteinModelPortal:Q9SAI7
SMR:Q9SAI7 EnsemblPlants:AT1G80710.1 GeneID:844410
KEGG:ath:AT1G80710 TAIR:At1g80710 HOGENOM:HOG000242689
InParanoid:Q9SAI7 PhylomeDB:Q9SAI7 ProtClustDB:CLSN2681927
Genevestigator:Q9SAI7 Uniprot:Q9SAI7
Length = 516
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 86/339 (25%), Positives = 150/339 (44%)
Query: 15 VIRYHSRRVTCLEFHPTNN-HILLSGDKKGQVGVWDFYKVSEK----IVYGNIHSCIVNN 69
V R R+ ++F P N ++ +GDK G VG W+ +E+ I HS V++
Sbjct: 209 VARVVPGRIFVVQFLPCENVKMVAAGDKLGNVGFWNLDCGNEEDNDGIYLFTPHSAPVSS 268
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG 129
I F + V ++S DG + D+E + L+ T ++ + P
Sbjct: 269 IVFQQNSLSRVISSSYDGLIRLMDVEKSV-FDLVY---------STDEAIFSLSQRPNDE 318
Query: 130 VVLVADNFGFLYLVDARTNSRSGEAIL---IHRKGSKVVGLHCNPIQPELLLSCGNDHFA 186
L FG Y V + R+G+++ +H + ++ + NP P ++ + D A
Sbjct: 319 QSLY---FGQDYGVFNVWDLRAGKSVFHWELHER--RINSIDFNPQNPHVMATSSTDGTA 373
Query: 187 RIWDIRRLEAGS--SLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244
+WD+R + A +L + H R V+SAYFSPSG + TTS DN + + N ++
Sbjct: 374 CLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLSG--ANFENTC 431
Query: 245 REIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA 304
+++ ++ +R ++ F+A W D YI Y G ID I+ + V
Sbjct: 432 --MIYHNNTSRWISKFKAVWGWDDS---------YI---YVGNLSKKIDVINPKLKRTVM 477
Query: 305 EVMDPNITTISPVNKLHPRDDVLASGSSRS--IFIWRPK 341
E+ +P I HP + +GS+ +++W K
Sbjct: 478 ELHNPLQRAIPCRIHCHPYNVGTLAGSTAGGQVYVWTTK 516
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 123 (48.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 44/169 (26%), Positives = 80/169 (47%)
Query: 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
E ++S G D+ +IWDIR+ L H + SP G ILT + DN LR+WD
Sbjct: 195 EQVISGGIDNEVKIWDIRKQAVLHHLRG--HSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Query: 235 SIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAAL 289
+P V H H+F ++L R W P S+ + +G+A
Sbjct: 253 V---RPYAPGERCVKVFQGHQHNFEKNL--LRCAWSPG--SDKIT----------SGSAD 295
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSS-RSIFI 337
+ D+ T +++ ++ N +++ V+ P++ ++ SGSS +++++
Sbjct: 296 RHVYIWDVNTRRILYKLPGHN-GSVNAVD-FSPKEPLILSGSSDKTLYL 342
Score = 104 (41.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H + EFHP +L SG + Q+ +W Y+ E ++ + HS V F P DG
Sbjct: 54 HEGEIFTAEFHPEGELLLSSGFDR-QIYIWQVYEDCENVMAMSGHSGAVMEAHFTP--DG 110
Query: 79 T-VYAASSDGTVSCTDLETG 97
+ ++ S+D T++ D+ TG
Sbjct: 111 SHIFTCSTDKTLAFWDIATG 130
Score = 89 (36.4 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+LL S +D +IWD R+ A +L + P + V + F +G ++++ DN ++IWD
Sbjct: 154 QLLCSGSDDRTIKIWDARKKHAAHTL-ESPFQ--VTAVCFGDTGEQVISGGIDNEVKIWD 210
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 20/88 (22%), Positives = 32/88 (36%)
Query: 6 VIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC 65
V D N + HS V F P +HI K + WD + + H
Sbjct: 84 VYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDK-TLAFWDIATGQRQRRFKG-HGN 141
Query: 66 IVNNIRFNPTNDGTVYAASSDGTVSCTD 93
VN+++ + + + S D T+ D
Sbjct: 142 FVNSVQGSRRGQQLLCSGSDDRTIKIWD 169
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 68/239 (28%), Positives = 116/239 (48%)
Query: 8 PDQVNCA---VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIH 63
P+ VN ++R H R V+ + F P + ++ SG G V VW + K++Y H
Sbjct: 161 PESVNYRQKFLLRGHLRGVSAVRFSPDAS-MIASGGADGAVKVWA--ASTGKLIYTFEGH 217
Query: 64 SCIVNNIRFNPTNDG-TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
++ I ++P DG T+ + S D T+ ++ TG A +P + G + +Y +
Sbjct: 218 LAGISTISWSP--DGATIASGSDDKTIRLWNVLTGKA------HPTPFIGHHNY--VYAI 267
Query: 123 DINPEKGVVLVADNFG-FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181
+P KG +LV+ ++ ++L D R+ +R +++ H V G+ L+ SC
Sbjct: 268 AFSP-KGNMLVSGSYDEAVFLWDVRS-ARVMKSLPAH--SDPVSGIDV-VWDGTLIASCA 322
Query: 182 NDHFARIWDIRRLEAGSSLCDLPHKR--VVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238
D RIWD G L L H+ V+S FSP+G +L + D+ +R+WD + G
Sbjct: 323 TDGLVRIWDT---STGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEG 378
>RGD|1310164 [details] [associations]
symbol:Ddb2 "damage specific DNA binding protein 2"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006290 "pyrimidine dimer repair" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0009411 "response to UV"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] IPI:IPI00778605
PRIDE:D4A7S0 Ensembl:ENSRNOT00000057180 UCSC:RGD:2318762
RGD:1310164 GeneTree:ENSGT00510000047881 ArrayExpress:D4A7S0
Gene3D:2.130.10.10 InterPro:IPR015943 InterPro:IPR001680
SMART:SM00320 Uniprot:D4A7S0
Length = 243
Score = 122 (48.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 262 AEWDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDITTGQLVAEVMDPNITTISPVN 318
A W + +L V+GRY N L ID D ++G+++ ++ DP + I+ +N
Sbjct: 153 ATWHSR---HNLIVVGRYPDPNLKSCVPYELRTIDVFDGSSGKMMCQLYDPGYSGITSLN 209
Query: 319 KLHPRDDVLASGSSRSIFIWRPKEKSELVEQK 350
+ +P D LAS I IW P+E L + +
Sbjct: 210 EFNPMGDTLASTMGYHILIWSPEEDGSLKDHE 241
Score = 74 (31.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY 59
RR T L +HPT+ L G K G + +W+F + +K ++
Sbjct: 112 RRTTSLAWHPTHPSTLAVGSKGGDIMIWNF-GIKDKPIF 149
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 119 (46.9 bits), Expect = 0.00091, P = 0.00091
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 136 NFGFLYLVDART-NSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR- 193
N G + L+ ++ R GE LIH S V+ NP L++ +D ++W+I
Sbjct: 50 NTGTIGLIPLKSFGKRKGETFLIHAHSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEA 109
Query: 194 -------LEAGSSLCDLPHKRVVNSAYFSPSGSKILTT-SQDNRLRIWD 234
L + S +C H + V F+P + IL + S D L+IWD
Sbjct: 110 IRSGATSLSSASIVCS-GHSKSVECIAFNPVANNILASCSADKTLKIWD 157
Score = 116 (45.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 148 NSRSGEAILI-HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-H 205
N + EA + H + KV+ ++ +P +L++ G D ++WD+ AG L H
Sbjct: 604 NYTTTEADFVGHNR--KVISVNFHPTAENVLITSGGDMVVKLWDLNEGGAGEKLSFANVH 661
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHS 250
++ S + +G KILT+S+D ++RI+D S + HS
Sbjct: 662 TDMITSVDVNWTGDKILTSSKDKKMRIFDPRTNKGGLASETVTHS 706
Score = 89 (36.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV---------SEKIVYGNIHSC 65
+I HS V EF+P N H L++ + VW+ + S IV HS
Sbjct: 71 LIHAHSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAIRSGATSLSSASIVCSG-HSK 129
Query: 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETG 97
V I FNP + + + S+D T+ DL G
Sbjct: 130 SVECIAFNPVANNILASCSADKTLKIWDLSNG 161
Score = 82 (33.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS+ V C+ F+P N+IL S + +WD EK + N + ++ +N DG
Sbjct: 127 HSKSVECIAFNPVANNILASCSADKTLKIWDLSNGEEKYSW-NFEQGSLTSLSWN--YDG 183
Query: 79 TVYAASS-DGTVSCTDLETGLALSLMNVN 106
++ A+ D D TG ++ + + N
Sbjct: 184 SLLVATGKDLKNRIIDARTGESIQVGDGN 212
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98
HS V + FNP N+ + AS D T+ +++ +
Sbjct: 75 HSSGVIDFEFNPFNEHQLVTASDDSTIKVWNIDEAI 110
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 98 (39.6 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 43/167 (25%), Positives = 78/167 (46%)
Query: 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236
++S G D+ ++WD+R+ + S+ H V S GS +L+ S DN +R+WD
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQG--HGDSVTGLSLSADGSYLLSNSMDNSVRVWDI- 254
Query: 237 FGNLDSPSREIV-----HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHP 291
+P V + H+F ++L R W D S+ A G+A
Sbjct: 255 --RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSA-DGSKIAA-----------GSADRF 298
Query: 292 IDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSS-RSIFI 337
+ D TT ++V + + + +++ V HP + ++ SGSS + ++I
Sbjct: 299 VYIWDTTTRRIVYK-LPGHAGSVNEV-AFHPEEPIVLSGSSDKRLYI 343
Score = 96 (38.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H V C +FHP N L S + +W+ Y E HS V + +N T+
Sbjct: 55 HEGEVYCCKFHP-NGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN-TDGS 112
Query: 79 TVYAASSDGTVSCTDLETG 97
+++AS+D TV D ETG
Sbjct: 113 LLFSASTDKTVCVWDSETG 131
Score = 80 (33.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 148 NSRSGEAILIHRKGSKVVGLHCNPIQ--PELLLSCGNDHFARIWDIRRLEAGSSLCDLPH 205
+S +GE + KG C P + P+L + +D ++WDIR+ +S+ +
Sbjct: 127 DSETGERVK-RLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKK---ASVHTFQN 182
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
V S F+ + +I++ DN +++WD
Sbjct: 183 TYQVLSVTFNDTSDQIISGGIDNDIKVWD 211
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 65/238 (27%), Positives = 110/238 (46%)
Query: 4 AHVIPDQVNCAVIRY-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI 62
AH Q+N + +R V EF + HI+ +G G V VW + +++I +
Sbjct: 187 AHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAG-WSGSVAVWKREQCAQEIKFIG- 244
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNG---WHGPRTWRML 119
HS RF+P T SS VSC+ T L SL +P G H R ++
Sbjct: 245 HSSQAGCARFHP-GAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVA 303
Query: 120 YGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG-SK-VVGLHCNPIQPELL 177
+ +P G L F + + T + L++++G SK V + +P +
Sbjct: 304 F----HPN-GHHLATACFDSTWRMYDLTTKKE----LLYQEGHSKSVADVAFHP-DGSVA 353
Query: 178 LSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
L+ G+D + R+WD+R G + L H + ++S + P+G +++T S DN +++WD
Sbjct: 354 LTGGHDCYGRVWDMR---TGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWD 408
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 181 GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240
G D+ ++WD+R+ EA +L H+ + SP GS +LT DN+L +WD
Sbjct: 199 GVDNDVKVWDLRKGEATMTLEG--HQDTITGMSLSPDGSYLLTNGMDNKLCVWDM---RP 253
Query: 241 DSPSREIV-----HSHDFNRHLTPFRAEWDP 266
+P V H H+F ++L + W P
Sbjct: 254 YAPQNRCVKIFEGHQHNFEKNL--LKCSWSP 282
Score = 99 (39.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 169 CNPIQ--PELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226
C P + P L++S +D A++WD+R+ A + P K + + FS + KI T
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGA---IQTFPDKYQITAVSFSDAADKIFTGGV 200
Query: 227 DNRLRIWD 234
DN +++WD
Sbjct: 201 DNDVKVWD 208
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/86 (24%), Positives = 42/86 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H V ++F+P ++ SG ++ +W + + + H + ++ + T+DG
Sbjct: 52 HPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW--TSDG 108
Query: 79 T-VYAASSDGTVSCTDLETGLALSLM 103
+ + +AS D TV D+ETG + M
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKM 134
Score = 58 (25.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVN 68
D N V++ H + L + + I+ + K V WD + ++I HS VN
Sbjct: 85 DCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDK-TVRAWDV-ETGKQIKKMAEHSSFVN 142
Query: 69 NIRFNPTNDGT--VYAASSDGTVSCTDL 94
+ PT G + + S DGT D+
Sbjct: 143 SCC--PTRRGPPLIISGSDDGTAKLWDM 168
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/228 (25%), Positives = 103/228 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +NH+LL+ G + +WD K ++G+ +S VN+ RF+P +
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNS--VNHCRFSP-D 754
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLY---GMDINPEKGV 130
D + + S+DGT+ D+ + +NV + P ++ + +K +
Sbjct: 755 DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK-I 813
Query: 131 VLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP--ELLLSCGNDHFARI 188
++ A N L+ D T+ E IH + +C+ P L + + + +
Sbjct: 814 IVAAKNKVLLF--DIHTSGLLAE---IHTGHHSTIQ-YCD-FSPYDHLAVIALSQYCVEL 866
Query: 189 WDI-RRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
W+I RL+ C H V+ FSP GS LT S D +R+W++
Sbjct: 867 WNIDSRLKVAD--CR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 148 NSRSGEAILIHRKGSKVVGL-HCNPIQPELLLSCG-NDHFARIWDIRRLEAGSSLCDLPH 205
+S +G+ + + + S+ V H LLL+ G ND F ++WD+ + E +++ H
Sbjct: 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM--FGH 742
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
VN FSP + + S D LR+WD N R+ ++ F F +
Sbjct: 743 TNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN----ERKSINVKRF------FLSS-- 790
Query: 266 PKDPSESLAVIGRYISENYNG-----AALHPIDFIDITTGQLVAEVMDPNITTISPVNKL 320
+DP E + VI + S + +G AA + + DI T L+AE+ + +TI +
Sbjct: 791 -EDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD-F 848
Query: 321 HPRDDVLASGSSR-SIFIW 338
P D + S+ + +W
Sbjct: 849 SPYDHLAVIALSQYCVELW 867
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 56/224 (25%), Positives = 103/224 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +++H+LL+ G + +WD K ++G+ +S VN+ RF+P +
Sbjct: 698 HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNS--VNHCRFSP-D 754
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPN--GWHGPRTWR--MLYGMDINPEKGVVL 132
D + + S+DGT+ D + +NV P+ ++ + + ++
Sbjct: 755 DKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIM 814
Query: 133 VADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192
VA ++L D T+ GE H S + +P Q L + + + +W+
Sbjct: 815 VAAK-NKIFLFDIHTSGLLGEIHTGHH--STIQYCDFSP-QNHLAVVALSQYCVELWNT- 869
Query: 193 RLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
++ S + D H V+ FSP GS LT+S D +R+W++
Sbjct: 870 --DSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWET 911
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 148 NSRSGEAILIHRKGSKVVGL-HCNPIQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPH 205
NS +GE + + + S+ V H LLL+ G+ D F ++WD+ + E +++ H
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTM--FGH 742
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
VN FSP + + S D L++WD+ N R+ ++ F +L
Sbjct: 743 TNSVNHCRFSPDDKLLASCSADGTLKLWDATSAN----ERKSINVKQFFLNL-------- 790
Query: 266 PKDPSESLAVIGRYISENYNGA-----ALHPIDFIDITTGQLVAEVMDPNITTISPVNKL 320
+DP E + VI + S + +GA A + I DI T L+ E+ + +TI +
Sbjct: 791 -EDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCD-F 848
Query: 321 HPRDDVLASGSSR-SIFIWRPKEKSELVE 348
P++ + S+ + +W +S++ +
Sbjct: 849 SPQNHLAVVALSQYCVELWNTDSRSKVAD 877
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 137 (53.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 119 LYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178
+Y +DI+ E ++ A++ F+ L+D NS S L KG +V + +PI +L
Sbjct: 169 VYDIDISAENALIATANDQPFIRLLDL--NSTSSAHTLSGHKGKTLV-VKWHPINSNILA 225
Query: 179 SCGNDHFARIWDIRRLEAGSSLCDLP--------------HKRVVNSAYFSPSGSKILTT 224
S G D +IWDIRR ++ + D+ H V+ + SGS + T
Sbjct: 226 SGGYDGEVKIWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSLLYTV 285
Query: 225 SQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTP 259
D+++R+WD + + P ++++ R+ P
Sbjct: 286 GNDDKIRVWDMVNVSTPPPINKLINFGPLIRNKHP 320
Score = 51 (23.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 49 DFYKVSEKIVY-GNIH-SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN-V 105
+ Y++ + V+ GN H + VN++ T+ + + S+D ++ DL+ A+ N +
Sbjct: 29 EIYQLGKHDVFPGNCHDNAAVNSLSLETTDYQYLLSGSNDSSIKLWDLKQQEAIREENEI 88
Query: 106 NPNGWHGPRTW 116
+ N P T+
Sbjct: 89 DANLHLHPTTF 99
Score = 50 (22.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
V L T+ LLSG + +WD K E I N I N+ +PT
Sbjct: 49 VNSLSLETTDYQYLLSGSNDSSIKLWDL-KQQEAIREENE---IDANLHLHPT 97
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 137 (53.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 41/155 (26%), Positives = 73/155 (47%)
Query: 119 LYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178
+Y +DI+ E ++ A++ F+ L+D NS S L KG +V + +PI +L
Sbjct: 169 VYDIDISAENALIATANDQPFIRLLDL--NSTSSAHTLSGHKGKTLV-VKWHPINSNILA 225
Query: 179 SCGNDHFARIWDIRRLEAGSSLCDLP--------------HKRVVNSAYFSPSGSKILTT 224
S G D +IWDIRR ++ + D+ H V+ + SGS + T
Sbjct: 226 SGGYDGEVKIWDIRRSQSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHSGSLLYTV 285
Query: 225 SQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTP 259
D+++R+WD + + P ++++ R+ P
Sbjct: 286 GNDDKIRVWDMVNVSTPPPINKLINFGPLIRNKHP 320
Score = 51 (23.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 49 DFYKVSEKIVY-GNIH-SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN-V 105
+ Y++ + V+ GN H + VN++ T+ + + S+D ++ DL+ A+ N +
Sbjct: 29 EIYQLGKHDVFPGNCHDNAAVNSLSLETTDYQYLLSGSNDSSIKLWDLKQQEAIREENEI 88
Query: 106 NPNGWHGPRTW 116
+ N P T+
Sbjct: 89 DANLHLHPTTF 99
Score = 50 (22.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
V L T+ LLSG + +WD K E I N I N+ +PT
Sbjct: 49 VNSLSLETTDYQYLLSGSNDSSIKLWDL-KQQEAIREENE---IDANLHLHPT 97
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/221 (24%), Positives = 90/221 (40%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VT L+F N ++ S + G V VWD S + Y H C VN + +P N G
Sbjct: 99 HKNNVTSLQFQADNKWMVTSSED-GTVKVWDVRSPSVQRNYK--HQCPVNEVVIHP-NQG 154
Query: 79 TVYAASSDGTVSCTDL-ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ + DG + DL E L+ P + + + + +++ +N
Sbjct: 155 ELISCDQDGNIRVWDLGENSCTHHLI---------PEDDVPINSLSVASDGSMLVAGNNK 205
Query: 138 GFLYLVDARTNSRSGEA---ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR- 193
G Y+ + N R + R SK + + L +C DH ARIW +
Sbjct: 206 GNCYVWKMQ-NQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQN 264
Query: 194 LEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
++L H+R V FS + ++T D+ +R+WD
Sbjct: 265 FNLETTLQG--HQRWVWDCAFSADSAYLVTACSDHYVRLWD 303
>CGD|CAL0000444 [details] [associations]
symbol:PGA63 species:5476 "Candida albicans" [GO:0030127
"COPII vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000633 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000444 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005198 GO:GO:0015629
GO:GO:0015031 GO:GO:0007155 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:NOG248389 KO:K14005 RefSeq:XP_718724.1 RefSeq:XP_718807.1
ProteinModelPortal:Q5AAU3 STRING:Q5AAU3 GeneID:3639524
GeneID:3639607 KEGG:cal:CaO19.13598 KEGG:cal:CaO19.6217
InterPro:IPR009917 Pfam:PF07304 Uniprot:Q5AAU3
Length = 1265
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 66/243 (27%), Positives = 109/243 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V L+F+P NH+L++G GQ+ +WD SE G + + + I F N+
Sbjct: 117 HTGAVKSLQFNPIQNHVLVTGGSNGQIFIWDTKTFSEPFAPGQAMTPM-DEITFVSWNNS 175
Query: 79 TVYAASSDGT---VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135
+ +S G S DL+T +++++ G G + + K ++ +D
Sbjct: 176 VSHILASTGNGGYTSIWDLKT--KREVLHLSYTGAGGRANFSYVSWHPSQSTK-LITASD 232
Query: 136 NFGF-LYLV-DARTNSRSGEAILI-HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192
N L L D R NS + E IL H+KG V+ L P LLLS G D+ +W+
Sbjct: 233 NDSCPLILTWDLR-NSNAPEKILEGHKKG--VLSLDWCKQDPTLLLSSGKDNSTFLWN-- 287
Query: 193 RLEAGSSLCDLPHKRVVNSAY---FSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVH 249
+E G L + P N A+ F+P+ I T+ + + +I S S ++
Sbjct: 288 PIE-GIKLGEYP--TTANWAFETKFAPAAPDIFATASFDGKVVVQTIQDTSPSVSTKVAS 344
Query: 250 SHD 252
+ D
Sbjct: 345 TDD 347
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 72/335 (21%), Positives = 138/335 (41%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRFN 73
VI HS V C++ +N +G + +WD K+ G+I+S + +I+ +
Sbjct: 281 VILGHSGWVNCVDVD-ISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINS--IRDIKIS 337
Query: 74 PTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV 133
N +++ D V C DLE + +HG + +Y + ++P +++
Sbjct: 338 KKNP-YLFSCGEDNRVKCWDLEYNKVI-------RDYHGHLSG--VYCLSLHPSLDLLMS 387
Query: 134 ADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
+ + D RT +S +L G+ V+ + ++P+++ S D R+WD+
Sbjct: 388 GGRDAVVRVWDIRT--KSSVFVLSGHTGT-VMSICSQSVEPQVV-SGSQDKMIRLWDLNN 443
Query: 194 LEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDF 253
+ SL HK+ + S P + DN +++W D R I F
Sbjct: 444 GKCRISLTH--HKKSIRSLSIHPFEYSFCSCGTDN-VKVWCGADAEFD---RNIT---GF 494
Query: 254 NRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDF-----IDITTGQLVAEVMD 308
N + + DP S+ ++G N LH D+ D + ++V ++
Sbjct: 495 NSIINCSLIKQDPYFNDSSILILGS------NNGQLHFYDWSSGYKYDTLSNKVVPGTVE 548
Query: 309 PNITTISPV-NKLHPRDDVLASGSSRSIFIWRPKE 342
+T+S +K R ++ + +SI IW+ E
Sbjct: 549 CENSTLSMAFDKSESR--LITTHGDKSIKIWKENE 581
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 72/335 (21%), Positives = 138/335 (41%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRFN 73
VI HS V C++ +N +G + +WD K+ G+I+S + +I+ +
Sbjct: 281 VILGHSGWVNCVDVD-ISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINS--IRDIKIS 337
Query: 74 PTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV 133
N +++ D V C DLE + +HG + +Y + ++P +++
Sbjct: 338 KKNP-YLFSCGEDNRVKCWDLEYNKVI-------RDYHGHLSG--VYCLSLHPSLDLLMS 387
Query: 134 ADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
+ + D RT +S +L G+ V+ + ++P+++ S D R+WD+
Sbjct: 388 GGRDAVVRVWDIRT--KSSVFVLSGHTGT-VMSICSQSVEPQVV-SGSQDKMIRLWDLNN 443
Query: 194 LEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDF 253
+ SL HK+ + S P + DN +++W D R I F
Sbjct: 444 GKCRISLTH--HKKSIRSLSIHPFEYSFCSCGTDN-VKVWCGADAEFD---RNIT---GF 494
Query: 254 NRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDF-----IDITTGQLVAEVMD 308
N + + DP S+ ++G N LH D+ D + ++V ++
Sbjct: 495 NSIINCSLIKQDPYFNDSSILILGS------NNGQLHFYDWSSGYKYDTLSNKVVPGTVE 548
Query: 309 PNITTISPV-NKLHPRDDVLASGSSRSIFIWRPKE 342
+T+S +K R ++ + +SI IW+ E
Sbjct: 549 CENSTLSMAFDKSESR--LITTHGDKSIKIWKENE 581
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 101 (40.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 152 GEAILIHRKGSKVVGLH-CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
GE+ + + V +H C+ Q LL++ +D ++W R SL H V
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQ--LLVTASDDKTVKVWSTHRQRFLFSLTQ--HINWVR 149
Query: 211 SAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSH 251
A FSP G I++ S D +++WD SRE VHS+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKT-------SRECVHSY 183
Score = 98 (39.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ I
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTCIAAA 205
Query: 225 SQDNRLRIWDS 235
DN +++WD+
Sbjct: 206 GMDNTVKVWDT 216
Score = 92 (37.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D+ ++WD R RL L H VN+ F PSG+ ++T S D+ L+I D
Sbjct: 202 IAAAGMDNTVKVWDTRTHRLVQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 235 SIFGNL 240
+ G L
Sbjct: 258 LMEGRL 263
Score = 87 (35.7 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 60 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHF--CSDG 115
Query: 79 TVYA-ASSDGTV 89
+ AS D TV
Sbjct: 116 QLLVTASDDKTV 127
Score = 62 (26.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC++F H L SG + +W S + H V + F+P+ G
Sbjct: 18 HRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTG-HKDAVTCVNFSPS--G 73
Query: 79 TVYAASS-DGTV 89
+ A+ S D TV
Sbjct: 74 HLLASGSRDKTV 85
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 149 (57.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 55/225 (24%), Positives = 102/225 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDFYKVS-EKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +NH+LL+ G + +WD + ++G+ +S V++ RF+P +
Sbjct: 700 HSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNS--VSHCRFSP-D 756
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDINPEKG--VV 131
D + + S+DGT+ D+++ +NV N ++ G ++
Sbjct: 757 DQVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIM 816
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
+ A N FL+ D ++ E + H S V +P L + + + +W
Sbjct: 817 VAAKNKVFLF--DIHSSGLLAEMHMGHH--SAVQYCDFSP-HNHLAVVALSQYCVELWS- 870
Query: 192 RRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+++G + D H V+ FSP GS LT+S D +R+W++
Sbjct: 871 --MDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 913
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 46/166 (27%), Positives = 79/166 (47%)
Query: 148 NSRSGEAILIHRKGSKVVGL-HCNPIQPELLLSCG-NDHFARIWDIRRLEAGSSLCDLPH 205
NS +GE + I+ + S+ V H LLL+ G ND+F ++WD+ + E +++ H
Sbjct: 687 NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTM--FGH 744
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
V+ FSP + + S D L++WD N R+ ++ F F +
Sbjct: 745 TNSVSHCRFSPDDQVLASCSADGTLKLWDVKSAN----ERKSINVKQF------FL---N 791
Query: 266 PKDPSESLAVIGRYISENYNGA-----ALHPIDFIDITTGQLVAEV 306
++P E L VI + S + +GA A + + DI + L+AE+
Sbjct: 792 SEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEM 837
>DICTYBASE|DDB_G0276481 [details] [associations]
symbol:ercc8 "DNA excision repair protein 8"
species:44689 "Dictyostelium discoideum" [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276481 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000015 GO:GO:0006283 KO:K10570
eggNOG:NOG271357 RefSeq:XP_643081.1 ProteinModelPortal:Q551N8
STRING:Q551N8 EnsemblProtists:DDB0232366 GeneID:8620485
KEGG:ddi:DDB_G0276481 InParanoid:Q551N8 OMA:HVYETAT
ProtClustDB:CLSZ2494971 Uniprot:Q551N8
Length = 513
Score = 85 (35.0 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
L D RTNS S + HR+ V+ + +P P L+ + D R+WDIRR
Sbjct: 187 LCDMRTNS-SVHCLTGHRES--VLSIKWSPFSPNLIATASKDKTIRLWDIRR 235
Score = 74 (31.1 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 205 HKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEW 264
H + S ++P G+ +++T D+++R+WD G ++ I + + N H P +
Sbjct: 331 HNGTITSIAWTPDGNYLVSTGADSKIRLWDIQKGGANTM---INYPNAHNVHKIPNQI-- 385
Query: 265 DPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306
L+ G+Y+ NG A+H + TG LV ++
Sbjct: 386 -------CLSTNGQYLFHP-NGRAIH---VYETATGNLVRQL 416
Score = 70 (29.7 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWD--FYKVSEKIVYGNIHSCIVNNIRFNPTN--DG 78
++ ++++P + I G G V VWD +VS+ Y + +C VN+I ++ N +
Sbjct: 119 ISSVQWYPIDTGIFFIGGVNGNVEVWDTNLGQVSQTF-Y--LENC-VNSISYSQVNCTNL 174
Query: 79 TVYAASSDGTVSCTDLET 96
+ AA++D V D+ T
Sbjct: 175 LIAAATTDPKVRLCDMRT 192
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK 52
+I Y+ + L+ N LLS G + ++D ++
Sbjct: 38 IINYNKGPINHLDIDVAENRYLLSVSGDGIIQIYDLFE 75
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 148 (57.2 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 58/227 (25%), Positives = 101/227 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +NH+LL+ G + +WD K ++G+ +S V + RF+P +
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNS--VTHCRFSP-D 754
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDINPEKG--VV 131
D + + S+DGT+ D+ + +NV + P ++ G ++
Sbjct: 755 DELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRII 814
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP--ELLLSCGNDHFARIW 189
+ A N + L+D T SG IH + +C+ P L + + + +W
Sbjct: 815 VAAKNK--VLLLDIHT---SGLLTEIHTGHHSTIQ-YCD-FSPYDHLAVIALSQYCVELW 867
Query: 190 DI-RRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+I R++ C H V+ FSP GS LT S D +R+W++
Sbjct: 868 NIDSRVKVAD--CR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 97 (39.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ I
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE--HGGFVTYVDFHPSGTCIAAA 167
Query: 225 SQDNRLRIWD 234
DN +++WD
Sbjct: 168 GMDNTVKVWD 177
Score = 94 (38.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D+ ++WD+R RL L H VN F PSG+ ++T S D+ L+I D
Sbjct: 164 IAAAGMDNTVKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKILD 219
Query: 235 SIFGNL 240
+ G L
Sbjct: 220 LMEGRL 225
Score = 88 (36.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 22 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHF--CSDG 77
Query: 79 TVYA-ASSDGTV 89
+ AS D TV
Sbjct: 78 QSFVTASDDKTV 89
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 97 (39.2 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ I
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE--HGGFVTYVDFHPSGTCIAAA 205
Query: 225 SQDNRLRIWDS 235
DN +++WD+
Sbjct: 206 GMDNTVKVWDA 216
Score = 95 (38.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 152 GEAILIHRKGSKVVGLH-CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
GE+ + + V +H C+ Q L++ +D ++W R SL H V
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQS--LVTASDDKTVKVWSTHRQRFLFSLTQ--HINWVR 149
Query: 211 SAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSH 251
A FSP G I++ S D +++WD SRE +HS+
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKT-------SRECIHSY 183
Score = 91 (37.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D+ ++WD R RL L H VN+ F PSG+ ++T S D+ L+I D
Sbjct: 202 IAAAGMDNTVKVWDARTHRLLQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 235 SIFGNL 240
+ G L
Sbjct: 258 LMEGRL 263
Score = 89 (36.4 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 60 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHF--CSDG 115
Query: 79 -TVYAASSDGTV 89
++ AS D TV
Sbjct: 116 QSLVTASDDKTV 127
Score = 63 (27.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 8 PDQVNCAVIRY---HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
P Q + ++ R+ H VTC++F H L SG + +W S + H
Sbjct: 4 PSQEDPSLERHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTG-HK 61
Query: 65 CIVNNIRFNPTNDGTVYAASS-DGTV 89
V + F+P+ G + A+ S D TV
Sbjct: 62 DAVTCVNFSPS--GHLLASGSRDKTV 85
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 144 (55.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 63/225 (28%), Positives = 106/225 (47%)
Query: 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP------ 74
R + + F NH SG GQV VW+ +SE ++ H+ V+ + + P
Sbjct: 173 RPIAIVRFSNNGNHFA-SGSWGGQVKVWNSDNLSEVQLFRG-HTDRVSGLDWYPLCQAWD 230
Query: 75 --TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVL 132
+ T+ ++D TV C + + L+ + G H R R+ + +P G L
Sbjct: 231 ADSEQLTLATGAADNTV-CL-WKASQSTPLLRLE--G-HLARVGRVAF----HPS-GDYL 280
Query: 133 VADNFGFLY-LVDARTNSRSGEAILIHRKGSK-VVGLHCNPIQPELLLSCGNDHFARIWD 190
V+ +F + L D T G +L+ S+ + + C P L+ S GND RIWD
Sbjct: 281 VSASFDTTWRLWDVHT----GVELLMQEGHSEGIFSIACQP-DGSLVSSGGNDAIGRIWD 335
Query: 191 IRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+R +G S+ L H R + + +SP+G ++ T+S D+ ++IWD
Sbjct: 336 LR---SGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWD 377
Score = 39 (18.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 324 DDVLASGSSRSIFIWRP 340
D ++SG R+I +W P
Sbjct: 446 DRFISSGYDRTIKLWYP 462
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/225 (24%), Positives = 99/225 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +NH+LL+ G + +WD K ++G+ +S V++ RF+P +
Sbjct: 698 HSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNS--VSHCRFSP-D 754
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDINPEKGVVLV 133
D + + S+DGT+ D+++ +NV N ++ G LV
Sbjct: 755 DKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLV 814
Query: 134 ADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLSCGNDHFARIWDI 191
+ L + T E IH + +C+ P L + + + +W+
Sbjct: 815 VAAKNKVLLFNIHTGGLLAE---IHTGHHSTIQ-YCD-FSPSNHLAVVALSQYCVELWN- 868
Query: 192 RRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+++ + D H V+ A FSP GS LT+S D +R+W++
Sbjct: 869 --MDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRLWET 911
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 97 (39.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ I
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTCIAAA 205
Query: 225 SQDNRLRIWD 234
DN +++WD
Sbjct: 206 GMDNTVKVWD 215
Score = 94 (38.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D+ ++WD+R RL L H VN+ F PSG+ ++T S D+ L+I D
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKILD 257
Query: 235 SIFGNL 240
+ G L
Sbjct: 258 LMEGRL 263
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 60 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHF--CSDG 115
Query: 79 TVYA-ASSDGTV 89
+ AS D TV
Sbjct: 116 QSFVTASDDKTV 127
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 97 (39.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ I
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE--HGGFVTYVDFHPSGTCIAAA 205
Query: 225 SQDNRLRIWD 234
DN +++WD
Sbjct: 206 GMDNTVKVWD 215
Score = 94 (38.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D+ ++WD+R RL L H VN F PSG+ ++T S D+ L+I D
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKILD 257
Query: 235 SIFGNL 240
+ G L
Sbjct: 258 LMEGRL 263
Score = 88 (36.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 60 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHF--CSDG 115
Query: 79 TVYA-ASSDGTV 89
+ AS D TV
Sbjct: 116 QSFVTASDDKTV 127
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 94 (38.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 156 LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFS 215
L+ K S + L +P+ E L S D ++WD+RR G H + V FS
Sbjct: 101 LMGHKAS-ISSLDFHPMG-EYLASGSVDSNIKLWDVRR--KGCVFRYKGHTQAVRCLAFS 156
Query: 216 PSGSKILTTSQDNRLRIWDSIFGNL 240
P G + + S D+ +++WD I G +
Sbjct: 157 PDGKWLASASDDSTVKLWDLIAGKM 181
Score = 86 (35.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H ++ L+FHP + L SG + +WD + Y H+ V + F+P DG
Sbjct: 104 HKASISSLDFHPMGEY-LASGSVDSNIKLWDVRRKGCVFRYKG-HTQAVRCLAFSP--DG 159
Query: 79 TVYA-ASSDGTVSCTDLETG 97
A AS D TV DL G
Sbjct: 160 KWLASASDDSTVKLWDLIAG 179
Score = 79 (32.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRRLEA-GSSLCDLPHKRVVNSAYFS 215
H VV H N E LL+ G+ D ++WD+ + GSS + VV S F+
Sbjct: 188 HTSAVNVVQFHPN----EYLLASGSADRTVKLWDLEKFNMIGSSEGETG---VVRSVLFN 240
Query: 216 PSGSKILTTSQDNRLRIW 233
P GS L + +N LR++
Sbjct: 241 PDGS-CLYSGSENTLRVY 257
Score = 72 (30.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V+ L ++ +L +G + +V +W K + I+ H+ V I+FN + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPN-CIMSLTGHTSAVGCIQFNSSEER 77
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLM 103
V A S G++ DLE L +LM
Sbjct: 78 VV-AGSLSGSLRLWDLEAAKILRTLM 102
Score = 64 (27.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 296 DITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSS-RSIFIWRPKEKSELVEQKE 351
D+ G+++ E T+ V + HP + +LASGS+ R++ +W EK ++ E
Sbjct: 175 DLIAGKMITEFTSH--TSAVNVVQFHPNEYLLASGSADRTVKLW-DLEKFNMIGSSE 228
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 59/234 (25%), Positives = 106/234 (45%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILL---SGDK--KGQVGVWDFY-KVSEKIVYGNIHSCIVN 68
V H+ +V C +F+ LL S D K V +WD K ++G++++ V+
Sbjct: 693 VYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFGHVNA--VS 750
Query: 69 NIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDI- 124
+ RF+P ND + + S+DGTV ++ + L + + N +L
Sbjct: 751 HCRFSP-NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSW 809
Query: 125 -NPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+++VA N L L D T++ + I+ H + +C+ + L++
Sbjct: 810 SRSSDTILVVAKNK--LLLFDVTTSNLLTQVIISHHSTIQ----YCDFCAGDELVAVALS 863
Query: 184 HFA-RIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
H + +W+I+ L S + D H V+ FS GS LT+S+D +RIW++
Sbjct: 864 HCSIELWNIKSL---SKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWET 914
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 194 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 250
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 251 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 300
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 358
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 359 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 411
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 412 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 448
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 190 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 246
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 247 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 296
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 297 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 354
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 355 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 407
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 408 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 444
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 194 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 250
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 251 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 300
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 358
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 359 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 411
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 412 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 448
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 194 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 250
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 251 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 300
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 358
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 359 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 411
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 412 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 448
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 194 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 250
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 251 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 300
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 358
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 359 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 411
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 412 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 448
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 194 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 250
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 251 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 300
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 358
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 359 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 411
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 412 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 448
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 66/278 (23%), Positives = 115/278 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-SEKIVYGNIHSCIVNNI 70
N + + H + F PT+N D G V +WDF + E+I+ G H V +
Sbjct: 195 NVKMFQAHKEAIREASFSPTDNKFATCSDD-GTVRIWDFLRCHEERILRG--HGADVKCV 251
Query: 71 RFNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK 128
++PT G V + S D + D +TG +L+ ++ + N + + +N
Sbjct: 252 DWHPTK-GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKN---------TVMEVKLNLNG 301
Query: 129 GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188
+L A L D R + H+K + V H P+ L S G+D
Sbjct: 302 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH--PVHEGLFASGGSDGSLLF 359
Query: 189 WDIR-RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247
W + E G ++ H+ ++ S + P G + + S D+ + W + P ++
Sbjct: 360 WHVGVEKEVGGM--EMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR-----NRPGDKM 412
Query: 248 VHSHDFNR--HLTPFRAEWDPKDPSESLAVI-GRYISE 282
++ N ++ E+D +P+ SLAVI G I E
Sbjct: 413 RDRYNLNLLPGMSEDGVEYDDLEPN-SLAVIPGMGIPE 449
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 96 (38.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L++S +D ++WD E S C+ H V F PSG+ +
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHPSGTCVAAA 236
Query: 225 SQDNRLRIWD 234
DN +++WD
Sbjct: 237 GMDNTVKVWD 246
Score = 93 (37.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 179 SCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236
+ G D+ ++WD+R RL L H VN+ F PSG+ ++T S D+ L+I D +
Sbjct: 235 AAGMDNTVKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKILDLM 290
Query: 237 FGNL 240
G L
Sbjct: 291 EGRL 294
Score = 86 (35.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC+ F P+ H+L SG + V +W E V+ H+ V ++ F +DG
Sbjct: 91 HKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNIKGESTVF-RAHTATVRSVHF--CSDG 146
Query: 79 TVYAASSD 86
+ +SD
Sbjct: 147 QSFVTASD 154
>SGD|S000004980 [details] [associations]
symbol:YNL035C "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004980 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006947 eggNOG:NOG285804
GeneTree:ENSGT00390000006996 OrthoDB:EOG4KSSTQ EMBL:Z71311
PIR:S62957 RefSeq:NP_014363.1 ProteinModelPortal:P53962 SMR:P53962
DIP:DIP-6372N IntAct:P53962 MINT:MINT-676672 STRING:P53962
PaxDb:P53962 PeptideAtlas:P53962 EnsemblFungi:YNL035C GeneID:855695
KEGG:sce:YNL035C CYGD:YNL035c HOGENOM:HOG000204857 OMA:AHESSIN
NextBio:980017 Genevestigator:P53962 GermOnline:YNL035C
Uniprot:P53962
Length = 389
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK------IVYGNIHSCIV 67
++I H VTC++FHP++ +ILLSG G ++D + E+ I Y +IHSC
Sbjct: 142 SLIDSHHDDVTCIKFHPSDVNILLSGSTDGYTNIYDLKQDEEEDALHQVINYASIHSCGW 201
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRT-WRMLYGMDINP 126
+P ++ S T + +L + L P + R W Y +DI P
Sbjct: 202 ----LSPKR---IFTLSHMETFAIHELNDK-SDELKEPQPLDFGDVREIWNCDYVVDIYP 253
Query: 127 EKGVVLVA---DNFGFLYLV---DARTNSRSGEAILIHRKGSKVVGLHCNPIQ-PELLLS 179
G++ +N G L L+ D + ++ +G ++ H G +VV P Q +L S
Sbjct: 254 --GLIATGKTQENCGELCLLPFKDEKVDTENG-IVIPHAHGDEVVRDIFIPAQHSNMLYS 310
Query: 180 CGNDHFARIWD 190
CG D +IW+
Sbjct: 311 CGEDGCVKIWE 321
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 119 (46.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H++ ++CL F P + H+LLSG Q+ +W+ Y + H+ + ++ F+ DG
Sbjct: 265 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFS--QDG 322
Query: 79 TVYAASS-DGTVSCTDLETGLALSLMN 104
+ ++S D T+ D E G L+ N
Sbjct: 323 RSFLSTSFDKTIKLWDTELGKCLNCFN 349
Score = 65 (27.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
V +P +P L+ D +DIR + + D H +NS F +G + +TT
Sbjct: 357 VKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAY-D-HHLGGINSITFLENGKRFVTT 414
Query: 225 SQDNRLRIWD 234
S D+ +R W+
Sbjct: 415 SDDSSMRFWE 424
>TAIR|locus:2121164 [details] [associations]
symbol:AT4G38480 "AT4G38480" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K11804 IPI:IPI00543482 RefSeq:NP_568042.1 UniGene:At.31171
ProteinModelPortal:F4JTP6 SMR:F4JTP6 EnsemblPlants:AT4G38480.1
GeneID:830004 KEGG:ath:AT4G38480 OMA:VAGMDEY Uniprot:F4JTP6
Length = 471
Score = 116 (45.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP-TND 77
H V + F+ + ILLSG QV +WD+ S K+ + + H + +F P ++D
Sbjct: 54 HKGCVNTVSFN-ADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDD 112
Query: 78 GTVYAASSDGTVSCTD-LETG-LALSLMNVNPNGWH-GPRTWRMLYGMDINPEKGVVL-V 133
T+ +++D V + LE+G + SL+ G H GP ++ + + P
Sbjct: 113 RTIVTSAADKQVRYSKILESGQVETSLL-----GKHQGP-----VHKLAVEPGSPFSFYT 162
Query: 134 ADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC---NPIQPELLLSCGNDHFARIWD 190
G + D RT + K + VV LH +P P LL G D +AR++D
Sbjct: 163 CGEDGAVKHFDLRTRVATNLFTCKEAKFNLVVYLHAIAVDPRNPGLLAVAGMDEYARVYD 222
Query: 191 IR 192
IR
Sbjct: 223 IR 224
Score = 66 (28.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 310 NITTISPVNKLHPRDDVLASGSSRS-IFIWRPKEKSELVEQKEEMKIIVC 358
N T+ VN P+ + + SGS IFIWR K+ L + + ++ C
Sbjct: 308 NRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNC 357
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 99 (39.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS 217
HR V H P E S D +IWDIR+ G H R VN F+P
Sbjct: 100 HRSNCISVDFH--PFG-EFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGVNVLRFTPD 154
Query: 218 GSKILTTSQDNRLRIWDSIFGNL--DSPSRE-IVHSHDFNRH 256
G +++ +DN +++WD G L + S E + S DF+ H
Sbjct: 155 GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH 196
Score = 90 (36.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNIHSCIVNNIRFNPTND 77
HS V CL+ ++ +L++G + +V +W K + + +YG HS ++++ F+ ++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG--HSSGIDSVTFD-ASE 71
Query: 78 GTVYAASSDGTVSCTDLE 95
V A ++ GT+ DLE
Sbjct: 72 VLVAAGAASGTIKLWDLE 89
Score = 78 (32.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSP 216
H +G V L P ++S G D+ ++WD L AG L + H+ + S F P
Sbjct: 142 HTRGVNV--LRFTP-DGRWVVSGGEDNIVKVWD---LTAGKLLTEFKSHEGQIQSLDFHP 195
Query: 217 SGSKILTTSQDNRLRIWD 234
+ T S D ++ WD
Sbjct: 196 HEFLLATGSADRTVKFWD 213
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 142 (55.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 55/230 (23%), Positives = 104/230 (45%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSG-DKKGQVGVWDFY-KVSEKIVYGNIHSCIVNNIRF 72
V H+ +V C +F+ LL+ + +WD K ++G++++ V++ RF
Sbjct: 693 VYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNA--VSHCRF 750
Query: 73 NPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDI--NPE 127
+P ND + + S+DGTV ++ + L + + N +L
Sbjct: 751 SP-NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSS 809
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFA- 186
+++VA N L L D T++ + I+ H + +C+ + L++ H +
Sbjct: 810 DTILVVAKNK--LLLFDVTTSNLLTQVIISHHSTIQ----YCDFCAGDELVAVALSHCSI 863
Query: 187 RIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+W+I+ L S + D H V+ FS GS LT+S+D +RIW++
Sbjct: 864 ELWNIKSL---SKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWET 910
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 142 (55.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 55/230 (23%), Positives = 104/230 (45%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSG-DKKGQVGVWDFY-KVSEKIVYGNIHSCIVNNIRF 72
V H+ +V C +F+ LL+ + +WD K ++G++++ V++ RF
Sbjct: 694 VYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNA--VSHCRF 751
Query: 73 NPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDI--NPE 127
+P ND + + S+DGTV ++ + L + + N +L
Sbjct: 752 SP-NDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSS 810
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFA- 186
+++VA N L L D T++ + I+ H + +C+ + L++ H +
Sbjct: 811 DTILVVAKNK--LLLFDVTTSNLLTQVIISHHSTIQ----YCDFCAGDELVAVALSHCSI 864
Query: 187 RIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+W+I+ L S + D H V+ FS GS LT+S+D +RIW++
Sbjct: 865 ELWNIKSL---SKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWET 911
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 105 (42.0 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 149 SRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKR 207
S GE++L V + C + LL+ +D ++W + R + +C L H
Sbjct: 90 SVKGESVLFRAHTGSVRSV-CFSADGQSLLTASDDQSIKLWSVHRQKI---ICTLREHNN 145
Query: 208 VVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHS 250
V A FSP G +++ S D +++WD+ SR+++H+
Sbjct: 146 WVRCARFSPDGQLMVSVSDDRTVKLWDA-------SSRQLIHT 181
Score = 94 (38.1 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236
+ + +D+ R+WDIR H VN+ F PSG+ +LT S D+ L+I D +
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHY--QVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 237 FGNL 240
G L
Sbjct: 259 EGRL 262
Score = 86 (35.3 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAY--FSPSGSKIL 222
+ C P+ L++S +D ++WD + + C+ P S+Y F PS + I
Sbjct: 147 VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCE-PGGY---SSYVDFHPSSTCIA 202
Query: 223 TTSQDNRLRIWD 234
T S DN +R+WD
Sbjct: 203 TASSDNTVRVWD 214
Score = 77 (32.2 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 41/176 (23%), Positives = 75/176 (42%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VTC++F P+ H+L S + V +W E +++ H+ V ++ F+ DG
Sbjct: 59 HKDAVTCVQFSPSA-HLLASSSRDKTVRLWVPSVKGESVLF-RAHTGSVRSVCFSA--DG 114
Query: 79 -TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
++ AS D ++ + + + + N W R R +P+ +++ +
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREH-NNW--VRCARF------SPDGQLMVSVSDD 165
Query: 138 GFLYLVDARTNSRSGEAILIHRKG-SKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192
+ L DA +SR G S V H P + + +D+ R+WDIR
Sbjct: 166 RTVKLWDA--SSRQLIHTFCEPGGYSSYVDFH--P-SSTCIATASSDNTVRVWDIR 216
Score = 62 (26.9 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H +T L+F P+ I SG V VW+ S + H V ++F+P+
Sbjct: 17 HRDAITSLDFSPSGKQIA-SGSVDASVMVWNMKPQSRAYRFTG-HKDAVTCVQFSPSAH- 73
Query: 79 TVYAASSDGTV 89
+ ++S D TV
Sbjct: 74 LLASSSRDKTV 84
Score = 46 (21.3 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 13/65 (20%), Positives = 32/65 (49%)
Query: 292 IDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPK----EKSELV 347
+ +D+ G+L+ + + + S V+ D ++GS + + +WR + S ++
Sbjct: 252 LKILDLLEGRLLY-TLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVL 310
Query: 348 EQKEE 352
+QK +
Sbjct: 311 QQKRD 315
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 112 (44.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
L SCG D AR+WD+R S L H + V S FSP+G + + +DN+ RIWD
Sbjct: 395 LAASCGLDSLARVWDLRT--GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Score = 70 (29.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 40/159 (25%), Positives = 63/159 (39%)
Query: 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94
IL + G +W+ +V+ I H ++ F+P +D + AS+D T
Sbjct: 269 ILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDD-CLATASADRTAKLWKT 327
Query: 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLY-LVDARTNSRSGE 153
+ G L G H R R+ + +P G L ++ + L D T + E
Sbjct: 328 D-GTLLQTFE----G-HLDRLARVAF----HPS-GKYLGTTSYDKTWRLWDINTGA---E 373
Query: 154 AILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192
+L V G+ L SCG D AR+WD+R
Sbjct: 374 LLLQEGHSRSVYGIAFQQ-DGALAASCGLDSLARVWDLR 411
Score = 51 (23.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/108 (22%), Positives = 45/108 (41%)
Query: 7 IPDQVNC-AVIRYHSRRVTCLEFHPTNNHILL-SGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+P N AV++ H R T + F P ++ + S D+ ++ W + G++
Sbjct: 284 MPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKL--WKTDGTLLQTFEGHLDR 341
Query: 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHG 112
+ + F+P+ + S D T D+ TG L L + +G
Sbjct: 342 --LARVAFHPSGK-YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYG 386
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 121 (47.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 10 QVNCA-VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIV 67
Q C ++R H+ +T L+F N IL+SG + +WD KI+ HS V
Sbjct: 100 QQRCIKLLRKHTYHITTLKFTQKGN-ILISGSSDETITIWDITSNGGKILTTLAAHSDPV 158
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRT 115
++I P +D + +AS DG + DL+T L + + G HG T
Sbjct: 159 SSIALTP-DDSIIVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTAT 205
Score = 55 (24.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 215 SPSGSKILTTSQDNRLRIWD 234
SP+G IL +S D ++R+W+
Sbjct: 222 SPNGQFILNSSLDGKIRLWN 241
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 95 (38.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + G D ++WD+R RL + H VNS F PSG+ ++T S D+ L+I D
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQV----HTAAVNSLSFHPSGNYLITASNDSTLKILD 258
Query: 235 SIFGNL 240
+ G L
Sbjct: 259 LLEGRL 264
Score = 91 (37.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 167 LHCNPIQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224
+ C P+ L+ S +D ++WD E S C+ H N F PSG+ I
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCE--HGGFANHVEFHPSGTCIAAA 206
Query: 225 SQDNRLRIWD 234
D +++WD
Sbjct: 207 GTDKTVKVWD 216
Score = 80 (33.2 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H V C++F P+ H++ SG + V +W E V+ H+ V ++ F+ +DG
Sbjct: 61 HKDAVMCVQFSPSG-HLVASGSRDKTVCLWVPSVKGESTVF-KAHTATVRSVHFS--SDG 116
Query: 79 -TVYAASSDGTV 89
++ AS D T+
Sbjct: 117 QSLVTASDDKTI 128
>UNIPROTKB|Q9GZS0 [details] [associations]
symbol:DNAI2 "Dynein intermediate chain 2, axonemal"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0003777 "microtubule motor activity" evidence=IMP] [GO:0005858
"axonemal dynein complex" evidence=IMP] [GO:0035085 "cilium
axoneme" evidence=IMP] [GO:0042384 "cilium assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:CH471099 GO:GO:0042384 GO:GO:0005874 GO:GO:0003777
GO:GO:0035085 EMBL:AC103809 Orphanet:244 GO:GO:0005858
Orphanet:98861 EMBL:AF250288 EMBL:AF253097 EMBL:AF253087
EMBL:AF253088 EMBL:AF253089 EMBL:AF260782 EMBL:AF253090
EMBL:AF253091 EMBL:AF253092 EMBL:AF253093 EMBL:AF253094
EMBL:AF253095 EMBL:AF253096 EMBL:AJ295276 EMBL:BC039582
EMBL:AL137526 IPI:IPI00304288 IPI:IPI00789929 PIR:T46370
RefSeq:NP_001166281.1 RefSeq:NP_075462.3 UniGene:Hs.147472
ProteinModelPortal:Q9GZS0 SMR:Q9GZS0 STRING:Q9GZS0
PhosphoSite:Q9GZS0 DMDM:311033373 PRIDE:Q9GZS0 DNASU:64446
Ensembl:ENST00000311014 Ensembl:ENST00000446837
Ensembl:ENST00000582036 GeneID:64446 KEGG:hsa:64446 UCSC:uc002jkf.3
UCSC:uc002jkg.3 CTD:64446 GeneCards:GC17P072292 H-InvDB:HIX0027346
H-InvDB:HIX0202470 HGNC:HGNC:18744 HPA:CAB006245 MIM:605483
MIM:612444 neXtProt:NX_Q9GZS0 PharmGKB:PA38669 eggNOG:NOG284872
HOGENOM:HOG000259651 HOVERGEN:HBG013035 InParanoid:Q9GZS0 KO:K11143
OMA:HPDGNRK OrthoDB:EOG45TCN2 PhylomeDB:Q9GZS0 GenomeRNAi:64446
NextBio:66463 ArrayExpress:Q9GZS0 Bgee:Q9GZS0 CleanEx:HS_DNAI2
Genevestigator:Q9GZS0 GermOnline:ENSG00000171595 Uniprot:Q9GZS0
Length = 605
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 61/232 (26%), Positives = 97/232 (41%)
Query: 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK---VSEKIVYGNIHSCIVNNIRFNPTN 76
S + LEF+P ++H+LL G GQ+ WD K V+E + H V + +
Sbjct: 216 SSPLVTLEFNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIESSHRDPVYGTIWLQSK 275
Query: 77 DGT-VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGV---VL 132
GT ++AS+DG V D+ ++ V + + L + + E + +
Sbjct: 276 TGTECFSASTDGQVMWWDIRK-MSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFM 334
Query: 133 VADNFGFLYLVDARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWD 190
V G + + + + S E I+ G + L NP P+ L+ G D ARIW
Sbjct: 335 VGTEQGIVISCNRKAKT-SAEKIVCTFPGHHGPIYALQRNPFYPKNFLTVG-DWTARIWS 392
Query: 191 IRRLEAGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
E+ S + H + A +SP + TT D L IWD +F D
Sbjct: 393 EDSRES-SIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFEQCD 443
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 49/224 (21%), Positives = 92/224 (41%)
Query: 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIR 71
N + + H + + F PT++ + SG G + +WDF + E+ V H V +
Sbjct: 221 NVKMYQAHKEAIRGISFSPTDSKFV-SGSDDGTLRIWDFMRCQEERVLRG-HGADVKCVH 278
Query: 72 FNPTNDGTVYAASSDGT--VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG 129
++P G + + S D + D ++G+AL+ + H ++ M + N
Sbjct: 279 WHPQK-GMIVSGSKDNQQPIKIWDPKSGIALATL-------HAHKSTVM--DLKWNDNGN 328
Query: 130 VVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
++ A L L D R + H+K + V H PI L S G+D W
Sbjct: 329 WLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWH--PIHEGLFCSGGSDGSILFW 386
Query: 190 DIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
++ + + H +V + + P G + + S D+ ++ W
Sbjct: 387 NVGT-DKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 117 (46.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 47/191 (24%), Positives = 82/191 (42%)
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136
D +AASS +S DL + + H P + + + N + VL +
Sbjct: 164 DQPFFAASSS-QISIYDLSRPSSTPSQTL-----HWPTSVDTITSVAFNQTETSVLASTG 217
Query: 137 FG-FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE 195
+ L D RT+S + +L + S V NP++ DH ++D+R++
Sbjct: 218 IDRSIILYDLRTSSPLSKLVL--KLASNAVSW--NPMEAFNFAVANEDHNVYMFDMRKMN 273
Query: 196 AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNR 255
++ H V FSP+G +++T S D +R+W+ G+ SR+I H+ R
Sbjct: 274 RALNVLK-DHVAAVMDVDFSPTGEELVTASYDRTIRLWNRATGH----SRDIYHTQRMQR 328
Query: 256 HLTPFRAEWDP 266
F A++ P
Sbjct: 329 ---VFSAKFTP 336
Score = 58 (25.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 38 SGDKKGQVGVWDFYKVSEKIVYGNI-HSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93
SG G V VWD V++ V+ N H IV + + P D + + ++D T+ D
Sbjct: 84 SGSGDGVVKVWDL--VTQGEVWNNTAHENIVKGVCWTP--DRKLLSCAADKTIKLFD 136
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN 76
R H+ + CL F+P + ++ +G +WD E++ HS + ++ FN +
Sbjct: 174 RGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQN-GEEVYTLRGHSAEIISLSFNTSG 231
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLM 103
D + S D TV D +TG ++++
Sbjct: 232 D-RIITGSFDHTVVVWDADTGRKVNIL 257
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDN 228
NP Q LL+ +D ARIWD + G L L H + S F+ G+ ++T S+DN
Sbjct: 354 NP-QGNHLLTGSSDKTARIWDA---QTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Query: 229 RLRIW 233
RIW
Sbjct: 410 TCRIW 414
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET---GLALSLMNVNPNGWHGPRTWRML 119
H+ ++ +N + GT+ + S D T+SC DL + S++ V+ + H + +
Sbjct: 183 HTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISS-HE----KQV 237
Query: 120 YGMDINPEKGVVLVADNFG-FLYLVDARTNSRSGE-AILIHRKGSKVVGLHCNPIQPELL 177
+ + + +L + ++ +L++ D R S + A +H + + NP +L
Sbjct: 238 SDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFIL 297
Query: 178 LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWD-S 235
+C D +WD+R L + H+ +V FSP IL +TS D R +WD S
Sbjct: 298 ATCSTDKTIALWDLRNLNQRLHTLE-GHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
Query: 236 IFGNLDSPSRE 246
G D P+ E
Sbjct: 357 RIGE-DQPAEE 366
>UNIPROTKB|E1BPM9 [details] [associations]
symbol:DNAI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005858 "axonemal dynein
complex" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042384 GO:GO:0003777
GO:GO:0035085 GeneTree:ENSGT00690000101848 GO:GO:0005858
OMA:HPDGNRK EMBL:DAAA02049588 EMBL:DAAA02049589 IPI:IPI00703972
Ensembl:ENSBTAT00000022242 Uniprot:E1BPM9
Length = 616
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/233 (26%), Positives = 94/233 (40%)
Query: 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK---VSEKIVYGNIHSCIVNNIRFNPTN 76
S + LE++P ++H+LL+G GQ+ WD K V+E H V + +
Sbjct: 216 SSPLVTLEYNPKDSHVLLAGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSK 275
Query: 77 DGT-VYAASSDGTVSCTD---LETGLALSLMNVNPNGWHGPRTWRMLYGMDIN-PEKGVV 131
GT ++AS+DG V D L + +M++ + + P K
Sbjct: 276 TGTECFSASTDGQVMWWDIRKLSEPTEVVIMDITKKEHLENALGAISLEFESTLPTK--F 333
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIW 189
+V G + + R E I+ G + L NP P+ L+ G D ARIW
Sbjct: 334 MVGTEQGVVISCN-RKGKTPAEKIVCTFSGHHGPIYALQRNPFYPKNFLTVG-DWTARIW 391
Query: 190 DIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
E+ S + H + A +SP + TT D L IWD +F D
Sbjct: 392 SEDSRES-SIMWTKYHMAYLTDAAWSPVRPAVFFTTKMDGTLDIWDFVFKQCD 443
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/222 (23%), Positives = 96/222 (43%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H V C+ + P ++ +L +G +V VW+ + I + H+ V + F N
Sbjct: 388 HYFDVNCVTYSP-DSQLLATGADDNKVKVWNVMSGTCFITFTE-HTNAVTALHFMADNH- 444
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
++ +AS DGTV D + N + P T R + +P VV
Sbjct: 445 SLLSASLDGTVRAWDFKR-------YKNYKTYTTP-TPRQFVSLTADPSGDVVCAGTLDS 496
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
F V ++ + + + H + V GL +P+ +LL S D+ R+WD+ +
Sbjct: 497 FEIFVWSKKTGQIKDILSGHE--APVHGLMFSPLT-QLLASSSWDYTVRLWDV--FASKG 551
Query: 199 SLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240
++ H V + F P G ++ +++ D ++ WD+I G L
Sbjct: 552 TVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 593
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/219 (22%), Positives = 90/219 (41%)
Query: 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN 76
++H++ +T L F P + H+LLSG V +WD Y E + + HS +++ FN T+
Sbjct: 247 KHHTKAITSLNFFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFN-TH 305
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136
+AS D + D ETG ++ P R ++ E V ++DN
Sbjct: 306 GDKFLSASFDRMMKLWDTETGKCIAKFTTGKT----PHVVRFNPTSELGHEF-VAGMSDN 360
Query: 137 FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
+ D R + + + H G C+ ++ +D R W+
Sbjct: 361 K--IVQFDTRAGNETVQEY-DHHLGPVNTITFCD--DGRRFMTTSDDRTLRAWEYGFGVP 415
Query: 197 GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+ + P+ + A PSG + S DN++ ++ S
Sbjct: 416 IKYIAE-PYLFAMTRAATHPSGKYVAYQSSDNQIVVYSS 453
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 60/246 (24%), Positives = 99/246 (40%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILL-SGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFN 73
VI H V C++ P N +GD+ + +WD K+ H V + +
Sbjct: 158 VISGHLGWVRCVDVEPGNQWFCTGAGDRT--IKIWDLASGVLKLTLTG-HIATVRGLAVS 214
Query: 74 PTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV 133
P + +++ D V C DLET + +HG + +Y + ++P V++
Sbjct: 215 PRHP-YLFSCGEDKMVKCWDLETNKVI-------RHYHGHLSG--VYALKLHPTLDVLVT 264
Query: 134 ADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
A + D RT R +L K S V L P+++ D R+WD
Sbjct: 265 AGRDAVARVWDMRT--RQNVHVLSGHK-STVASLAVQEFDPQVVTG-SMDSTIRLWD--- 317
Query: 194 LEAGSSLCDLPH-KRVVNSAYFSPSGSKILTTSQDNRLRIWD----SIFGNLDSPSREIV 248
L AG +L L H K+ V + P + S DN ++ W + GN + + IV
Sbjct: 318 LAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNA-IV 375
Query: 249 HSHDFN 254
++ N
Sbjct: 376 NTLSIN 381
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK--VSEKIVYGNIHSCIVNNIRF 72
V H+ + C+ HPT ++L S D + +WD+ K + +I G HS V + F
Sbjct: 309 VFEAHADYIRCVAVHPTLPYVLSSSDDM-LIKLWDWEKGWLCTQIFEG--HSHYVMQVTF 365
Query: 73 NPTNDGTVYAASSDGTVSCTDL 94
NP + T +AS D T+ +L
Sbjct: 366 NPKDTNTFASASLDRTIKIWNL 387
Score = 87 (35.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS 217
H KG V +P L+ +DH A++WD + +L H V++ F P
Sbjct: 399 HLKGVNCVDYFTGGDKPYLITG-SDDHTAKVWDYQTKSCVQTLEGHTHN--VSAVSFHPE 455
Query: 218 GSKILTTSQDNRLRIWDSIFGNLDS 242
I+T S+D +RIW + L++
Sbjct: 456 LPIIITGSEDGTVRIWHATTYRLEN 480
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTSEL 420
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTSEL 420
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTSEL 420
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTSEL 420
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTSEL 420
>ZFIN|ZDB-GENE-070410-46 [details] [associations]
symbol:zgc:162235 "zgc:162235" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-070410-46 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000101848 EMBL:AL954682 EMBL:CU459056
IPI:IPI00495757 Ensembl:ENSDART00000009319 ArrayExpress:F1QXZ0
Bgee:F1QXZ0 Uniprot:F1QXZ0
Length = 555
Score = 130 (50.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 54/227 (23%), Positives = 89/227 (39%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI---HSCIVNNIRFNPTNDGT 79
+ CLE++ N IL+ G GQ+G WD S+ + I H V + + T GT
Sbjct: 213 LVCLEYNLKNISILIGGSYNGQIGYWDTRSGSQPVQISAIEHSHKDPVYKVIWLQTKIGT 272
Query: 80 -VYAASSDGTVSCTDLET-GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
++AS+DG V D+ + ++P + M+ + LV
Sbjct: 273 EAFSASTDGQVLFWDIRNMSEPTKQLILDPAKSKNLNNAFGAFSMEFDNTMPKFLVGTEQ 332
Query: 138 GFLYLVDARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE 195
G + L + + + + E I+ G V + NP P+ L+ D ARIW +
Sbjct: 333 GLVVLCNRKLET-TDEPIVCTYSGHLGPVYAVQRNPFFPKYFLTVA-DWTARIWS-EDIR 389
Query: 196 AGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
S + H + +SP + T D L +WD + D
Sbjct: 390 LSSIMSTKYHTSHLMDGCWSPVRPAVFFTVKMDGTLDVWDILLKQKD 436
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 21 RRVTCLEFHPTNNHIL 36
R T L +HP +NH L
Sbjct: 157 RAATSLSWHPVDNHKL 172
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/187 (27%), Positives = 82/187 (43%)
Query: 12 NCAVIR--Y-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IV 67
N VIR Y H VTCL FHPT IL SG + + ++D+ K S K + I ++
Sbjct: 162 NHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEML 220
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE 127
+I F+P+ D + + T+ D+ T ++ NP H + Y NP
Sbjct: 221 RSISFHPSGD-FILVGTQHPTLRLYDINTFQCF--VSCNPQDQHTDAICSVNY----NPS 273
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI---QPELLLSCGNDH 184
+ + G + L D +N H G++V C+ I + +LS G D
Sbjct: 274 ANMYVTGSKDGCIKLWDGVSNRCITTFEKAH-DGAEV----CSAIFSKNSKYILSSGKDS 328
Query: 185 FARIWDI 191
A++W+I
Sbjct: 329 VAKLWEI 335
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/187 (27%), Positives = 82/187 (43%)
Query: 12 NCAVIR--Y-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IV 67
N VIR Y H VTCL FHPT IL SG + + ++D+ K S K + I ++
Sbjct: 162 NHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEML 220
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE 127
+I F+P+ D + + T+ D+ T ++ NP H + Y NP
Sbjct: 221 RSISFHPSGD-FILVGTQHPTLRLYDINTFQCF--VSCNPQDQHTDAICSVNY----NPS 273
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI---QPELLLSCGNDH 184
+ + G + L D +N H G++V C+ I + +LS G D
Sbjct: 274 ANMYVTGSKDGCIKLWDGVSNRCITTFEKAH-DGAEV----CSAIFSKNSKYILSSGKDS 328
Query: 185 FARIWDI 191
A++W+I
Sbjct: 329 VAKLWEI 335
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 198 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVS- 254
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
T +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 255 TRSPYLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTIDVLVTC 305
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 306 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVRCQAAEPQIITG-SHDTTIRLWD---L 358
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
AG + L HK+ V + P + S DN ++ W
Sbjct: 359 VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQW 397
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 320 LHPRDDVLASGSSRSIFIWR 339
LHPR ASGS +I W+
Sbjct: 379 LHPRHYTFASGSPDNIKQWK 398
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 199 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVS- 255
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
T +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 256 TRSPYLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTIDVLVTC 306
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 307 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVRCQAAEPQIITG-SHDTTIRLWD---L 359
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
AG + L HK+ V + P + S DN ++ W
Sbjct: 360 VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQW 398
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 320 LHPRDDVLASGSSRSIFIWR 339
LHPR ASGS +I W+
Sbjct: 380 LHPRHYTFASGSPDNIKQWK 399
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 200 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVS- 256
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
T +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 257 TRSPYLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTIDVLVTC 307
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 308 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVRCQAAEPQIITG-SHDTTIRLWD---L 360
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
AG + L HK+ V + P + S DN ++ W
Sbjct: 361 VAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQW 399
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 320 LHPRDDVLASGSSRSIFIWR 339
LHPR ASGS +I W+
Sbjct: 381 LHPRHYTFASGSPDNIKQWK 400
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 154 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 213
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 214 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 274 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 326
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 327 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 384
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 385 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 442
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 443 QIWQMAENIYNDEESDVTTSEL 464
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 154 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 213
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 214 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 274 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 326
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 327 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 384
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 385 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 442
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 443 QIWQMAENIYNDEESDVTTSEL 464
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 75/319 (23%), Positives = 127/319 (39%)
Query: 10 QVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI------ 62
++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 104 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 163
Query: 63 --HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWHGPR 114
H + +N G + +AS D TV D+ G + + +
Sbjct: 164 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 223
Query: 115 TWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 224 AWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS- 275
Query: 175 ELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRI 232
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D RL +
Sbjct: 276 EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 233 WD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYISENY 284
WD S G S E++ H ++ F W+P +P +V I + +
Sbjct: 335 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIMQIW 392
Query: 285 NGAA-LHPIDFIDITTGQL 302
A ++ + D+TT +L
Sbjct: 393 QMAENIYNDEESDVTTSEL 411
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 75/319 (23%), Positives = 127/319 (39%)
Query: 10 QVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI------ 62
++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 104 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 163
Query: 63 --HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWHGPR 114
H + +N G + +AS D TV D+ G + + +
Sbjct: 164 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 223
Query: 115 TWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 224 AWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS- 275
Query: 175 ELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRI 232
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D RL +
Sbjct: 276 EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Query: 233 WD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYISENY 284
WD S G S E++ H ++ F W+P +P +V I + +
Sbjct: 335 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIMQIW 392
Query: 285 NGAA-LHPIDFIDITTGQL 302
A ++ + D+TT +L
Sbjct: 393 QMAENIYNDEESDVTTSEL 411
>MGI|MGI:2685574 [details] [associations]
symbol:Dnaic2 "dynein, axonemal, intermediate chain 2"
species:10090 "Mus musculus" [GO:0003774 "motor activity"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005858 "axonemal dynein complex" evidence=ISO]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0035085 "cilium
axoneme" evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685574 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
EMBL:CH466558 GO:GO:0042384 GO:GO:0005874 GO:GO:0003777
GO:GO:0035085 EMBL:AL663079 GeneTree:ENSGT00690000101848
GO:GO:0005858 HOGENOM:HOG000259651 HOVERGEN:HBG013035 KO:K11143
OMA:HPDGNRK OrthoDB:EOG45TCN2 EMBL:EF565270 IPI:IPI00112690
IPI:IPI00403331 RefSeq:NP_001030050.2 UniGene:Mm.212764
ProteinModelPortal:A2AC93 SMR:A2AC93 DIP:DIP-59778N STRING:A2AC93
PhosphoSite:A2AC93 PaxDb:A2AC93 PRIDE:A2AC93 DNASU:432611
Ensembl:ENSMUST00000069325 Ensembl:ENSMUST00000092469
Ensembl:ENSMUST00000141762 GeneID:432611 KEGG:mmu:432611
UCSC:uc007mfn.1 CTD:432611 InParanoid:A2AC94 NextBio:407836
Bgee:A2AC93 Genevestigator:A2AC93 Uniprot:A2AC93
Length = 623
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 54/226 (23%), Positives = 95/226 (42%)
Query: 26 LEFHPTNNHILLSGDKKGQVGVWDFYK---VSEKIVYGNIHSCIVNNIRFNPTNDGT-VY 81
LE++P ++H+LL G GQ+ WD K V+E H V + + GT +
Sbjct: 222 LEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECF 281
Query: 82 AASSDGTVSCTDLET---GLALSLMNVNPNGWHGPRTWRMLYGMDIN-PEKGVVLVADNF 137
+AS+DG V D+ + + +M+++ + + P K +V
Sbjct: 282 SASTDGQVMWWDIRKISEPIEVVIMDISRKEQLENALGAISLEFESTLPTK--FMVGTEQ 339
Query: 138 GFLYLVDARTNSRSGEAIL-IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
G + + + +++ + + + + L NP P+ L+ G D ARIW E+
Sbjct: 340 GIVISCNRKAKTQAEKIVCTFYGHHGPIYALQRNPFYPKNFLTVG-DWTARIWSEDSRES 398
Query: 197 GSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
S + H ++ +SP + TT D L IWD +F D
Sbjct: 399 -SIMWTKYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCD 443
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 61/227 (26%), Positives = 98/227 (43%)
Query: 24 TCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK-------IVYGNIHSCIVNNIRFNPTN 76
T L ++ +LLS GQV VWD + S + +V N VN++ + PT+
Sbjct: 204 TSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAVNDVTWMPTH 263
Query: 77 DGTVYAASSDGT-VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135
D +++AA ++G VS DL T N + G + R Y + ++ AD
Sbjct: 264 D-SLFAACTEGNAVSLLDLRTKKEKLQSNREKHDG-GVNSCRFNYKNSL-----ILASAD 316
Query: 136 NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRRL 194
+ G L L D R ++S A + H G+ V L +P +L + G D ++WD
Sbjct: 317 SNGRLNLWDIRNMNKSPIATMEH--GTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSCE 374
Query: 195 EAGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNL 240
E + H VN + ++ + + DN + IW GNL
Sbjct: 375 E--TIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPA-GNL 418
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 128 (50.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 75/322 (23%), Positives = 128/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 398
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 399 QIWQMAENIYNDEESDVTTPEL 420
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 86 (35.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/65 (40%), Positives = 33/65 (50%)
Query: 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDN 228
NP Q LL+ +D ARIWD + G L L H + S F+ G I+T S+DN
Sbjct: 354 NP-QGNRLLTGSSDKTARIWDA---QTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDN 409
Query: 229 RLRIW 233
RIW
Sbjct: 410 TCRIW 414
Score = 86 (35.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN 76
R H+ + CL F+P + ++ +G +WD E++ HS + ++ FN T+
Sbjct: 174 RGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQS-GEEVFTLTGHSAEIISLSFN-TS 230
Query: 77 DGTVYAASSDGTVSCTDLETG 97
+ S D TV+ + +TG
Sbjct: 231 GNRIITGSFDHTVTVWEADTG 251
Score = 82 (33.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN 228
C +L+ + D ARI+ E + L H+ ++ F+P G+++LT S D
Sbjct: 310 CFDYTGKLIATASADGTARIFSAATRECVTKLEG--HEGEISKISFNPQGNRLLTGSSDK 367
Query: 229 RLRIWDSIFG 238
RIWD+ G
Sbjct: 368 TARIWDAQTG 377
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 49/204 (24%), Positives = 90/204 (44%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + K HS ++++ ++ ++ + +AS D T+
Sbjct: 50 NGEWLASSAADALIIIWGAYDGNCKKTLYG-HSLEISDVAWS-SDSSRLVSASDDKTLKV 107
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + G H ++ D NP ++ V+ +F + + + +T +
Sbjct: 108 WDMRSGKCLKTLK----G-HSD----FVFCCDFNPPSNLI-VSGSFDESVKIWEVKTG-K 156
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +CN L++S D RIWD + +L D + V +
Sbjct: 157 CLKTLSAHSDPISAVNFNCNG---SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV-S 212
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G ILT + DN L++WD
Sbjct: 213 FVKFSPNGKYILTATLDNTLKLWD 236
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 50/218 (22%), Positives = 86/218 (39%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VT + F N ++ S + G + VWD S I H+ VN + +P N G
Sbjct: 74 HRGNVTSVSFQQDNRWMVTSSED-GTIKVWDVR--SPSIPRNYKHNAPVNEVVIHP-NQG 129
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
+ + DG + DL + P L + + + ++ A+ G
Sbjct: 130 ELISCDRDGNIRIWDLGENQCTHQLT--------PEDDTSLQSLSMASDGSMLAAANTKG 181
Query: 139 FLYLVDA--RTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
Y+ + T++ + + R S + + L +C DH AR+W I
Sbjct: 182 NCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFK 241
Query: 197 GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ D H+R V FS + ++T S D+ +R+WD
Sbjct: 242 LETTLD-GHQRWVWDCAFSADSAYLVTASSDHYVRLWD 278
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 90 (36.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDN 228
NP Q LL+ +D ARIWD+ + G L L H + S F+ G+ ++T S+DN
Sbjct: 354 NP-QGNRLLTGSSDKTARIWDV---QTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Query: 229 RLRIW 233
RIW
Sbjct: 410 SCRIW 414
Score = 81 (33.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN 76
R H+ + CL F+P + ++ +G +WD E++V H + ++ F+ +
Sbjct: 174 RGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQS-GEEVVTLTGHLAEIISLSFDTSG 231
Query: 77 DGTVYAASSDGTVSCTDLETG 97
D + S D TV D TG
Sbjct: 232 D-RIITGSFDHTVVVWDASTG 251
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 19 HSRRVTCLEFHPTNN-HILLSGDKKGQ--VGVWDF-YKVSEKIVYGNIHSCIVNNIRFNP 74
HS +V C F TNN H LL + +WD K ++G+ +S VN+ RF+P
Sbjct: 699 HSEQVNCCHF--TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNS--VNHCRFSP 754
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDINPEKGVV 131
+D + + S+DGT+ D+++ +NV N ++ G
Sbjct: 755 -DDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTR 813
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
++ ++L D T E H S + +P Q L + + +W+
Sbjct: 814 IMVAAKNKIFLFDIHTGGLLAEIHTGHH--STIQYCDFSP-QNHLAVVALSQCCVELWN- 869
Query: 192 RRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+++ + D H V+ FSP GS LT+S D +R+W++
Sbjct: 870 --MDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 912
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 148 NSRSGEAILIHRKGSKVVGL-H-CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPH 205
NS +G + ++ + S+ V H N LL + +D F ++WD+ + E +++ H
Sbjct: 686 NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTM--FGH 743
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
VN FSP + + S D L++WD N R+ ++ F F +
Sbjct: 744 TNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN----ERKSINVKQF------FL---N 790
Query: 266 PKDPSESLAVIGRYISENYNG-----AALHPIDFIDITTGQLVAEVMDPNITTI-----S 315
++P E + VI + S + +G AA + I DI TG L+AE+ + +TI S
Sbjct: 791 SEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFS 850
Query: 316 PVNKL 320
P N L
Sbjct: 851 PQNHL 855
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 19 HSRRVTCLEFHPTNN-HILLSGDKKGQ--VGVWDF-YKVSEKIVYGNIHSCIVNNIRFNP 74
HS +V C F TNN H LL + +WD K ++G+ +S VN+ RF+P
Sbjct: 706 HSEQVNCCHF--TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNS--VNHCRFSP 761
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNP---NGWHGPRTWRMLYGMDINPEKGVV 131
+D + + S+DGT+ D+++ +NV N ++ G
Sbjct: 762 -DDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTR 820
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
++ ++L D T E H S + +P Q L + + +W+
Sbjct: 821 IMVAAKNKIFLFDIHTGGLLAEIHTGHH--STIQYCDFSP-QNHLAVVALSQCCVELWN- 876
Query: 192 RRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+++ + D H V+ FSP GS LT+S D +R+W++
Sbjct: 877 --MDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 919
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 148 NSRSGEAILIHRKGSKVVGL-H-CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPH 205
NS +G + ++ + S+ V H N LL + +D F ++WD+ + E +++ H
Sbjct: 693 NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTM--FGH 750
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
VN FSP + + S D L++WD N R+ ++ F F +
Sbjct: 751 TNSVNHCRFSPDDKLLASCSADGTLKLWDVKSAN----ERKSINVKQF------FL---N 797
Query: 266 PKDPSESLAVIGRYISENYNG-----AALHPIDFIDITTGQLVAEVMDPNITTI-----S 315
++P E + VI + S + +G AA + I DI TG L+AE+ + +TI S
Sbjct: 798 SEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFS 857
Query: 316 PVNKL 320
P N L
Sbjct: 858 PQNHL 862
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 58/245 (23%), Positives = 106/245 (43%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 136
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 137 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 186
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 187 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 241
Query: 212 AYFSPSGSKILTTSQDNRLRIWD-SIFGNLDSPSREIVHS-HDFNRHLTPFRAEWDPKDP 269
S GS +L+ + DN +R+WD F + R + H+F ++L R W P D
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNL--LRCSWSP-DG 298
Query: 270 SESLA 274
S+ A
Sbjct: 299 SKIAA 303
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 58/239 (24%), Positives = 92/239 (38%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+V D N A ++ HS V L ++ T+ +L S V VWD + E++ H+
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDS-ETGERVKRLKGHT 152
Query: 65 CIVNNIRFNPTNDGT--VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
VN+ P G V S DGTV D+ A+ T+++L +
Sbjct: 153 SFVNSCY--PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ---------NTYQVL-AV 200
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
N ++ + + D R N + + V GL + + LLS
Sbjct: 201 TFNDTSDQIISGGIDNDIKVWDLRQNKLT---YTMRGHADSVTGLSLSS-EGSYLLSNAM 256
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVN------SAYFSPSGSKILTTSQDNRLRIWDS 235
D+ R+WD+R + V N +SP GSKI S D + +WD+
Sbjct: 257 DNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
>ZFIN|ZDB-GENE-030131-2958 [details] [associations]
symbol:cstf1 "cleavage stimulation factor, 3'
pre-RNA, subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-2958 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000234077 HOVERGEN:HBG051144 EMBL:BC066520
IPI:IPI00481543 UniGene:Dr.78498 ProteinModelPortal:Q6NYN6
STRING:Q6NYN6 PRIDE:Q6NYN6 InParanoid:Q6NYN6 ArrayExpress:Q6NYN6
Bgee:Q6NYN6 Uniprot:Q6NYN6
Length = 431
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/184 (26%), Positives = 82/184 (44%)
Query: 12 NCAVIR--Y-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IV 67
N VIR Y H VTCL FHPT IL SG + + ++D+ K S K + ++ ++
Sbjct: 162 NHPVIRTLYDHVDEVTCLSFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEML 220
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE 127
+I F+P+ D + + T+ D+ T ++ NP H + G+ NP
Sbjct: 221 RSISFHPSGD-FLLVGTQHPTLRLYDVNTFQCF--VSCNPLDQHTDT----ICGVCYNPS 273
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFAR 187
+ G + L D +N H +G++V + + +LS G D A+
Sbjct: 274 ANSYVTCSKDGSIKLWDGVSNRCVTTFDKAH-EGAEVCSAVFSK-NSKYILSTGKDSVAK 331
Query: 188 IWDI 191
+W+I
Sbjct: 332 LWEI 335
>UNIPROTKB|E1BRJ9 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00823063
Ensembl:ENSGALT00000039543 ArrayExpress:E1BRJ9 Uniprot:E1BRJ9
Length = 894
Score = 114 (45.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 153 EAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSS-LCDLPHKRVVNS 211
EA+L K+ + +P+ +LL+S D RIWD L AG LC H + S
Sbjct: 585 EAVL-RGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWD---LGAGREVLCLQGHTDQIFS 640
Query: 212 AYFSPSGSKILTTSQDNRLRIWD 234
+SP G K+ T S+D RLR+++
Sbjct: 641 LAWSPDGRKLATVSKDGRLRLFE 663
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWD 49
V L+FHPT + IL SG K +V VWD
Sbjct: 129 VDMLQFHPTADGILTSGVGK-RVTVWD 154
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-----NIHSCIVNNIRFN 73
HS VT +F P + +L +G V VW + +++ V+ ++F+
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFH 135
Query: 74 PTNDG 78
PT DG
Sbjct: 136 PTADG 140
>UNIPROTKB|F1NP32 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00818031
Ensembl:ENSGALT00000012652 ArrayExpress:F1NP32 Uniprot:F1NP32
Length = 894
Score = 114 (45.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 153 EAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSS-LCDLPHKRVVNS 211
EA+L K+ + +P+ +LL+S D RIWD L AG LC H + S
Sbjct: 585 EAVL-RGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWD---LGAGREVLCLQGHTDQIFS 640
Query: 212 AYFSPSGSKILTTSQDNRLRIWD 234
+SP G K+ T S+D RLR+++
Sbjct: 641 LAWSPDGRKLATVSKDGRLRLFE 663
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWD 49
V L+FHPT + IL SG K +V VWD
Sbjct: 129 VDMLQFHPTADGILTSGVGK-RVTVWD 154
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-----NIHSCIVNNIRFN 73
HS VT +F P + +L +G V VW + +++ V+ ++F+
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFH 135
Query: 74 PTNDG 78
PT DG
Sbjct: 136 PTADG 140
>UNIPROTKB|E1BR57 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00819431
Ensembl:ENSGALT00000039544 ArrayExpress:E1BR57 Uniprot:E1BR57
Length = 895
Score = 114 (45.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 153 EAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSS-LCDLPHKRVVNS 211
EA+L K+ + +P+ +LL+S D RIWD L AG LC H + S
Sbjct: 586 EAVL-RGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWD---LGAGREVLCLQGHTDQIFS 641
Query: 212 AYFSPSGSKILTTSQDNRLRIWD 234
+SP G K+ T S+D RLR+++
Sbjct: 642 LAWSPDGRKLATVSKDGRLRLFE 664
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWD 49
V L+FHPT + IL SG K +V VWD
Sbjct: 129 VDMLQFHPTADGILTSGVGK-RVTVWD 154
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-----NIHSCIVNNIRFN 73
HS VT +F P + +L +G V VW + +++ V+ ++F+
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFH 135
Query: 74 PTNDG 78
PT DG
Sbjct: 136 PTADG 140
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 57/254 (22%), Positives = 100/254 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--------G----NI 62
V R H V L+ P +LSG G V ++D S + Y G ++
Sbjct: 38 VERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENASRQPHYTCKAVCSVGRSHPDV 97
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
H V +++ P + G ++S D T+ D T A + N +Y
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEET----------VYSH 147
Query: 123 DINP---EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179
++P + +V V + L D ++ S S + HR+ +++ + +P +L +
Sbjct: 148 HMSPAATKHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQ--EILAVSWSPRHDYILAT 204
Query: 180 CGNDHFARIWDIRRLEA--------------GSSLCDLPHKRVVNSAYFSPSGSKILTTS 225
D ++WD+RR + + H VN F+ G +LT
Sbjct: 205 ASADSRVKLWDVRRASGCLLTLDQHNGKKSQAAESANTAHNGKVNGLCFTSDGLHLLTIG 264
Query: 226 QDNRLRIWDSIFGN 239
DNR+R+W+S G+
Sbjct: 265 TDNRMRLWNSSSGD 278
>UNIPROTKB|I3LLI7 [details] [associations]
symbol:DNAI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005858 "axonemal dynein
complex" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0042384 GO:GO:0003777
GO:GO:0035085 GeneTree:ENSGT00690000101848 GO:GO:0005858
OMA:HPDGNRK EMBL:FP680599 Ensembl:ENSSSCT00000030835 Uniprot:I3LLI7
Length = 575
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 58/227 (25%), Positives = 93/227 (40%)
Query: 26 LEFHPTNNHILLSGDKKGQVGVWDFYK---VSEKIVYGNIHSCIVNNIRFNPTNDGT-VY 81
LE++P ++H+LL G GQ+ WD K V+E H V + + GT +
Sbjct: 222 LEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECF 281
Query: 82 AASSDGTVSCTDLET---GLALSLMNVNPNGWHGPRTWRMLYGMDIN-PEKGVVLVADNF 137
+AS+DG V D+ + +M++ + + P K +V
Sbjct: 282 SASTDGQVMWWDIRKMSEPTEVVVMDITKKEQLENALGAISLEFESTLPTK--FMVGTEQ 339
Query: 138 GFLYLVDARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE 195
G + + + +++ E I+ G V L NP P+ L+ G D ARIW E
Sbjct: 340 GIVISCNRKAKTQA-EKIVCTFSGHHGPVYALQRNPFYPKNFLTVG-DWTARIWSEDSRE 397
Query: 196 AGSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
+ S + H + +SP + TT D L IWD +F D
Sbjct: 398 S-SIMWTKYHMAYLTDGAWSPVRPAVFFTTKMDGTLDIWDFVFKQCD 443
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 96 (38.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI---HSCIVNNIRFNPT 75
HSR V EF PT N++L+S + + + S+K ++ N HS VN+ ++P
Sbjct: 1605 HSRAVNYCEFSPTANNLLMSCAWDSSIII---FNTSDKNIFRNFRSAHSKPVNSCCWSP- 1660
Query: 76 NDGTVYAASS-DGTV 89
DGT+ A+SS DGT+
Sbjct: 1661 -DGTLIASSSWDGTI 1674
Score = 90 (36.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 170 NPIQPELLLSCG-NDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQD 227
+P QP LL+ G D R++D+ + L H R + S FSPSG+ I +TS+D
Sbjct: 1792 SPTQP--LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSED 1849
Query: 228 NRLRIWD 234
+++W+
Sbjct: 1850 LLIKVWN 1856
Score = 89 (36.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236
L+S G D R+W+I+ + LC H + A+F+ I++ S D +++WD+
Sbjct: 1971 LVSGGWDFNLRVWNIKTQK--ELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQ 2028
Query: 237 FGN 239
FG+
Sbjct: 2029 FGS 2031
Score = 79 (32.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+ S +D ++W+ A +S HK +N FS G + T QD L IWD+
Sbjct: 2120 IASSSDDGTVKLWEFNSATATTSA----HKGSINQCVFSKDGKYVATCGQDCVLNIWDA 2174
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 54/223 (24%), Positives = 98/223 (43%)
Query: 148 NSRSGEAILIHRKGSKVVGL-HCNPIQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPH 205
NS +GE + + + S+ V H LLL+ G+ D+F ++WD+ + E +++ H
Sbjct: 421 NSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTM--FGH 478
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
V+ FSP + + S D L++WD N R+ ++ F F +
Sbjct: 479 TNSVSHCRFSPDDKLLASCSADGTLKLWDVKSAN----ERKSINVKQF------FL---N 525
Query: 266 PKDPSESLAVIGRYISENYNGAAL-----HPIDFIDITTGQLVAEVMDPNITTI-----S 315
++ E + V+ + S + +GA+L + + +I TG L+AE+ + +TI S
Sbjct: 526 SEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFS 585
Query: 316 PVNKLHPRDDVLASGSSRSIFIWRPKEKSELVEQKEEMKIIVC 358
P N L R FIW P ++ + ++C
Sbjct: 586 PSNHLAVVALSQYCVEKRGKFIWLPGSLERKLDYSKHFFTVLC 628
Score = 106 (42.4 bits), Expect = 5.8e-05, Sum P(2) = 5.7e-05
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 19 HSRRVTCLEFHPTNNHILLS-GDKKGQVGVWDF-YKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS +V C F +NH+LL+ G + +WD K ++G+ +S V++ RF+P +
Sbjct: 434 HSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNS--VSHCRFSP-D 490
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNV 105
D + + S+DGT+ D+++ +NV
Sbjct: 491 DKLLASCSADGTLKLWDVKSANERKSINV 519
Score = 71 (30.1 bits), Expect = 5.8e-05, Sum P(2) = 5.7e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 177 LLSCGNDHFARIWDI--RRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
LLS D ++W+I R+E +C H+ V S SP +K +TS D +IW
Sbjct: 803 LLSWSFDGTVKVWNIITGRIEK-DFVC---HQDTVLSCDISPDATKFSSTSADKTAKIWS 858
Query: 235 SIFGNLDSPSREI 247
F +L SP E+
Sbjct: 859 --F-DLLSPLHEL 868
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 167 LHCNPIQPEL--LLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILT 223
L C+ I P+ S D A+IW L S L +L HK V + FS S +L
Sbjct: 834 LSCD-ISPDATKFSSTSADKTAKIWSFDLL---SPLHELRGHKGCVRCSAFSVD-STLLA 888
Query: 224 TSQDN-RLRIWDSIFGNL 240
T DN +RIW+ G L
Sbjct: 889 TGDDNGEIRIWNVSNGEL 906
Score = 61 (26.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 205 HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
HK V F+ G ++++S D+ +++W+
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWN 776
>TAIR|locus:2132796 [details] [associations]
symbol:AT4G35140 "AT4G35140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K11804 HOGENOM:HOG000243561 EMBL:AY120722
EMBL:BT000028 IPI:IPI00525689 RefSeq:NP_195240.2 UniGene:At.44855
ProteinModelPortal:Q8L862 SMR:Q8L862 PRIDE:Q8L862
EnsemblPlants:AT4G35140.1 GeneID:829666 KEGG:ath:AT4G35140
TAIR:At4g35140 eggNOG:NOG257676 InParanoid:Q8L862 OMA:IDPRNSN
PhylomeDB:Q8L862 ProtClustDB:CLSN2684761 Genevestigator:Q8L862
Uniprot:Q8L862
Length = 496
Score = 97 (39.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/190 (22%), Positives = 81/190 (42%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP-TND 77
H V + F+ + +L+SG +V +WD+ + K+ + + H+ V +F P ++D
Sbjct: 58 HKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDD 116
Query: 78 GTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
T+ ++DG V + G + + G H R ++ NP +
Sbjct: 117 RTIVTCAADGMVRRASILEG---DKVETSFLGLHQGRAHKLCIEPG-NPH--IFYTCGED 170
Query: 138 GFLYLVDARTNSRSG----EAILIHRKGSKVVGLHCNPIQPE---LLLSCGNDHFARIWD 190
G + D RT + + ++ R+ + L+ I P L G + +AR++D
Sbjct: 171 GLVQRFDLRTEAPTELFTCRSVDPRRRNMDAIQLNAIAIDPRNSNLFAVGGMEEYARLYD 230
Query: 191 IRRLEAGSSL 200
IRR + G L
Sbjct: 231 IRRFQ-GEGL 239
Score = 73 (30.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 310 NITTISPVNKLHPRDDVLASGSSRS-IFIWRPKEKSELVEQKE-EMKIIVC 358
N T+ VN PR + + SGS IFIWR K+ EL+ E + ++ C
Sbjct: 332 NCETVKGVNFFGPRSEYVVSGSDCGRIFIWR-KKGGELIRVMEADRHVVNC 381
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 68/288 (23%), Positives = 113/288 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + HK + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDP 269
L +WD S G S E++ H ++ F W+P +P
Sbjct: 341 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEP 386
>RGD|1359602 [details] [associations]
symbol:Dnai2 "dynein, axonemal, intermediate chain 2"
species:10116 "Rattus norvegicus" [GO:0003777 "microtubule motor
activity" evidence=IEA;ISO] [GO:0005858 "axonemal dynein complex"
evidence=IEA;ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IEA;ISO] [GO:0042384 "cilium
assembly" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359602 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0030030 GO:GO:0005874 GO:GO:0035085
GO:GO:0030286 GO:GO:0003774 GeneTree:ENSGT00690000101848 CTD:64446
eggNOG:NOG284872 HOGENOM:HOG000259651 HOVERGEN:HBG013035 KO:K11143
OMA:HPDGNRK EMBL:BC081920 IPI:IPI00372973 RefSeq:NP_001007727.1
UniGene:Rn.137787 ProteinModelPortal:Q66HC9 STRING:Q66HC9
PRIDE:Q66HC9 Ensembl:ENSRNOT00000038852 GeneID:360654
KEGG:rno:360654 InParanoid:Q66HC9 NextBio:673627
ArrayExpress:Q66HC9 Genevestigator:Q66HC9 Uniprot:Q66HC9
Length = 619
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 57/226 (25%), Positives = 94/226 (41%)
Query: 26 LEFHPTNNHILLSGDKKGQVGVWDFYK---VSEKIVYGNIHSCIVNNIRFNPTNDGT-VY 81
LE++P ++H+LL G GQ+ WD K V+E H V + + GT +
Sbjct: 222 LEYNPKDSHVLLGGCYNGQIACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECF 281
Query: 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGV---VLVADNFG 138
+AS+DG V D+ ++ V + + L + + E + +V G
Sbjct: 282 SASTDGQVMWWDIRK-ISEPTEVVIMDITRKEQLENALGAISLEFESTLPTKFMVGTEQG 340
Query: 139 FLYLVDARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
+ + + + + E I+ G + L NP P+ L+ G D ARIW E+
Sbjct: 341 IVISCNRKAKTPA-EKIVCTFSGHHGPIYALQRNPFYPKNFLTVG-DWAARIWSEESRES 398
Query: 197 GSSLCDLPHKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIFGNLD 241
S + H ++ +SP + TT D L IWD +F D
Sbjct: 399 -SIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCD 443
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 99 (39.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNIHSCIVNNIRFNPTND 77
HS V CL+ ++ +L++G + +V +W K + + +YG HS ++++ F+ ++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYG--HSSGIDSVTFD-ASE 71
Query: 78 GTVYAASSDGTVSCTDLE 95
G V A ++ GT+ DLE
Sbjct: 72 GLVAAGAASGTIKLWDLE 89
Score = 76 (31.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSP 216
H +G V L P ++S G D+ ++WD L AG L + H+ + S F P
Sbjct: 142 HTRGVNV--LRFTP-DGRWIVSGGEDNVVKVWD---LTAGKLLHEFKSHEGKIQSLDFHP 195
Query: 217 SGSKILTTSQDNRLRIWD 234
+ T S D ++ WD
Sbjct: 196 HEFLLATGSADKTVKFWD 213
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 53/218 (24%), Positives = 98/218 (44%)
Query: 148 NSRSGEAILIHRKGSKVVGL-HCNPIQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPH 205
NS +GE + + + S+ V H LLL+ G+ D F ++WD+ + E +++ H
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTM--FGH 742
Query: 206 KRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWD 265
VN FSP + + S D L++WD+ N R+ ++ F +L
Sbjct: 743 TNSVNHCRFSPDDKLLASCSADGTLKLWDATSAN----ERKSINVKQFFLNL-------- 790
Query: 266 PKDPSESLAVIGRYISENYNGA-----ALHPIDFIDITTGQLVAEVMDPNITTISPVNKL 320
+DP E + VI + S + +GA A + I + + VA+ +++ + V
Sbjct: 791 -EDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKVADCRG-HLSWVHGVMFS 848
Query: 321 HPRDDVLASGSSRSIFIWRPKE--KSELVEQKEEMKII 356
L S ++I +W K+ K+ V K+E+ ++
Sbjct: 849 PDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVV 886
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 57/254 (22%), Positives = 100/254 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--------G----NI 62
V R H V L+ P +LSG G + ++D S + Y G ++
Sbjct: 38 VERVHCSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDV 97
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
H V +++ P + G ++S D T+ D T A + N +Y
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEET----------VYSH 147
Query: 123 DINP---EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179
++P + +V V + L D ++ S S + HR+ +++ + +P +L +
Sbjct: 148 HMSPAATKHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQ--EILAVSWSPRYDYILAT 204
Query: 180 CGNDHFARIWDIRRLEA---------GSSL-----CDLPHKRVVNSAYFSPSGSKILTTS 225
D ++WD+RR G + H VN F+ G +LT
Sbjct: 205 ASADSRVKLWDVRRASGCLLTLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264
Query: 226 QDNRLRIWDSIFGN 239
DNR+R+W+S G+
Sbjct: 265 TDNRMRLWNSSSGD 278
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 49/218 (22%), Positives = 93/218 (42%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H VT + F + +G + G V +WD + Y S VN + +P N
Sbjct: 75 HKGNVTGVGFQKEGKW-MYTGSEDGTVKIWDLKAPGCQRDYEC--SAPVNTVVLHP-NQA 130
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
+ + +G++ DL + + P+G G + + I+ + G+V+ ++ G
Sbjct: 131 ELISGDQNGSIRVWDLISNTCSR--ELVPDGEVG------ITSLTISSDGGLVVASNTKG 182
Query: 139 --FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
F++ + SR I + ++ +P +LL +C DH +IW+ ++
Sbjct: 183 KCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSP-DTKLLATCSADHTVKIWNTKKFNV 241
Query: 197 GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+L H+R V FS + ++T S D+ R+WD
Sbjct: 242 VQTLNG--HQRWVWDCAFSNDSAYLVTGSSDHLSRLWD 277
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 89 (36.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 69 (29.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS 332
H + D+T G++++E P T PVN + HP + +LASGSS
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSS 209
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 123 (48.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 58/248 (23%), Positives = 106/248 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 135
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 136 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 185
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 186 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 240
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 295
Query: 267 KDPSESLA 274
D S+ A
Sbjct: 296 -DGSKIAA 302
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 58/239 (24%), Positives = 92/239 (38%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+V D N A ++ HS V L ++ T+ +L S V VWD + E++ H+
Sbjct: 94 NVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDS-ETGERVKRLKGHT 151
Query: 65 CIVNNIRFNPTNDGT--VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
VN+ P G V S DGTV D+ A+ T+++L +
Sbjct: 152 SFVNSCY--PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ---------NTYQVL-AV 199
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
N ++ + + D R N + + V GL + + LLS
Sbjct: 200 TFNDTSDQIISGGIDNDIKVWDLRQNKLT---YTMRGHADSVTGLSLSS-EGSYLLSNAM 255
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVN------SAYFSPSGSKILTTSQDNRLRIWDS 235
D+ R+WD+R + V N +SP GSKI S D + +WD+
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 58/248 (23%), Positives = 106/248 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 136
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 137 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 186
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 187 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 241
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 296
Query: 267 KDPSESLA 274
D S+ A
Sbjct: 297 -DGSKIAA 303
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 58/239 (24%), Positives = 92/239 (38%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+V D N A ++ HS V L ++ T+ +L S V VWD + E++ H+
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDS-ETGERVKRLKGHT 152
Query: 65 CIVNNIRFNPTNDGT--VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
VN+ P G V S DGTV D+ A+ T+++L +
Sbjct: 153 SFVNSCY--PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ---------NTYQVL-AV 200
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
N ++ + + D R N + + V GL + + LLS
Sbjct: 201 TFNDTSDQIISGGIDNDIKVWDLRQNKLT---YTMRGHADSVTGLSLSS-EGSYLLSNAM 256
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVN------SAYFSPSGSKILTTSQDNRLRIWDS 235
D+ R+WD+R + V N +SP GSKI S D + +WD+
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 58/248 (23%), Positives = 106/248 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 136
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 137 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 186
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 187 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 241
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 296
Query: 267 KDPSESLA 274
D S+ A
Sbjct: 297 -DGSKIAA 303
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 58/239 (24%), Positives = 92/239 (38%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+V D N A ++ HS V L ++ T+ +L S V VWD + E++ H+
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDS-ETGERVKRLKGHT 152
Query: 65 CIVNNIRFNPTNDGT--VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
VN+ P G V S DGTV D+ A+ T+++L +
Sbjct: 153 SFVNSCY--PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ---------NTYQVL-AV 200
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
N ++ + + D R N + + V GL + + LLS
Sbjct: 201 TFNDTSDQIISGGIDNDIKVWDLRQNKLT---YTMRGHADSVTGLSLSS-EGSYLLSNAM 256
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVN------SAYFSPSGSKILTTSQDNRLRIWDS 235
D+ R+WD+R + V N +SP GSKI S D + +WD+
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 70/306 (22%), Positives = 129/306 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 136
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 137 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 186
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
A+ + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 187 --AVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 241
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 296
Query: 267 KDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDV 326
D S+ A G+A + D TT + V + + +I+ V HP + +
Sbjct: 297 -DGSKIAA-----------GSADRFVYVWD-TTSRRVLYKLPGHAGSINEV-AFHPDEPI 342
Query: 327 LASGSS 332
+ S SS
Sbjct: 343 ILSASS 348
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 68/293 (23%), Positives = 128/293 (43%)
Query: 47 VWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVN 106
+W+ Y + HS V + +N T+ +++AS+D TV+ D ETG + + +
Sbjct: 119 LWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGH 177
Query: 107 PNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166
+ + Y P+ +V + G + L D R + A+ + +V+
Sbjct: 178 TSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA----AVQTFQNTYQVLA 225
Query: 167 LHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226
+ N +++ S G D+ ++WD+R+ + ++ H V S GS +L+ +
Sbjct: 226 VTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTGLSLSSEGSYLLSNAM 282
Query: 227 DNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
DN +RIWD +P V + H+F ++L R W P D S+ + G
Sbjct: 283 DNTVRIWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP-DGSK---IAG---- 329
Query: 282 ENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKL--HPRDDVLASGSS 332
G+A + D T+ +++ ++ P VN+L HP + ++ S SS
Sbjct: 330 ----GSADRFVYVWDTTSRRILYKL--PGHA--GSVNELAFHPEEPIILSASS 374
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 40/175 (22%), Positives = 79/175 (45%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H V C +FHP N + +G + + +W+ Y + HS V + +N T+
Sbjct: 92 HEGEVYCCKFHPWGNTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGS 149
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
+++AS+D TV+ D ETG + + + + + Y P+ +V + G
Sbjct: 150 MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDG 201
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
+ L D R + A+ + +V+ + N +++ S G D+ ++WD+R+
Sbjct: 202 TVKLWDIRKKA----AVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQ 251
Score = 60 (26.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 20/51 (39%), Positives = 23/51 (45%)
Query: 183 DHFARIWDI--RRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRL 230
D F +WD RR+ L LP H VN F P IL+ S D RL
Sbjct: 333 DRFVYVWDTTSRRI-----LYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 57/253 (22%), Positives = 99/253 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--------G----NI 62
V R H V L+ P +LSG G + ++D S + Y G ++
Sbjct: 38 VERIHGSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRNHPDV 97
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
H V +++ P + G ++S D T+ D T + N +Y
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET----------VYSH 147
Query: 123 DINP---EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179
++P + +V V + L D ++ S S + HR+ +++ + +P +L +
Sbjct: 148 HMSPVATKHCLVAVGTKGPKVQLCDLKSGSCS-HILQGHRQ--EILAVSWSPRYEYILAT 204
Query: 180 CGNDHFARIWDIRRLEA---------GSSL-----CDLPHKRVVNSAYFSPSGSKILTTS 225
D A++WD+RR G + H VN F+ G +LT
Sbjct: 205 ASADSKAKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264
Query: 226 QDNRLRIWDSIFG 238
DNR+R+W+S G
Sbjct: 265 TDNRMRLWNSSNG 277
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 56/250 (22%), Positives = 101/250 (40%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--------G----NI 62
V R H V L+ P +LSG G + ++D S + Y G ++
Sbjct: 38 VERIHCSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDV 97
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
H V +++ P + G ++S D T+ D T L + +V ++ T +
Sbjct: 98 HKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT---LQIADV----FNFEETVYSHHMS 150
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
+ + +V V + L D ++ S S + HR+ +++ + +P +L +
Sbjct: 151 PVATKHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQ--EILAVSWSPRYEYILATASA 207
Query: 183 DHFARIWDIRRLEA--------------GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN 228
D A++WD+RR + + H VN F+ G +LT DN
Sbjct: 208 DSRAKLWDVRRASGCLITLDQHNGKKSQAAESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267
Query: 229 RLRIWDSIFG 238
R+R+W+S G
Sbjct: 268 RMRLWNSSNG 277
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 42/161 (26%), Positives = 67/161 (41%)
Query: 120 YGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179
Y +D +P + +L DN ++L ++ + V L +P + + S
Sbjct: 250 YALDWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSS 309
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLPHKRV-VNSAYFSPSGSKILTTSQDNRL-RIWDSIF 237
C D RIWD+R + S+L H V VN ++ +L T DN + +WD
Sbjct: 310 CSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWD--L 367
Query: 238 GNLDSPSREIVHSHDFNRHLTP-FRAEWDPKDPSESLAVIG 277
+L S S F H P + EW P + S + V+G
Sbjct: 368 RSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSV-IGVVG 407
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 58/248 (23%), Positives = 106/248 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W+ Y + HS V + +N T+ +++AS+D TV+
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 135
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 136 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 185
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 186 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 240
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 295
Query: 267 KDPSESLA 274
D S+ A
Sbjct: 296 -DGSKIAA 302
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 58/239 (24%), Positives = 92/239 (38%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHS 64
+V D N A ++ HS V L ++ T+ +L S V VWD + E++ H+
Sbjct: 94 NVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDS-ETGERVKRLKGHT 151
Query: 65 CIVNNIRFNPTNDGT--VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
VN+ P G V S DGTV D+ A+ T+++L +
Sbjct: 152 SFVNSCY--PARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ---------NTYQVL-AV 199
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
N ++ + + D R N + + V GL + + LLS
Sbjct: 200 TFNDTSDQIISGGIDNDIKVWDLRQNKLT---YTMRGHADSVTGLSLSS-EGSYLLSNAM 255
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVN------SAYFSPSGSKILTTSQDNRLRIWDS 235
D+ R+WD+R + V N +SP GSKI S D + +WD+
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 58/248 (23%), Positives = 105/248 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + HS V + +N T+ +++AS+D TV+
Sbjct: 78 NGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN-TDGSMLFSASTDKTVAV 136
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRS 151
D ETG + + + + + Y P+ +V + G + L D R +
Sbjct: 137 WDSETGERVKRLKGHTSFVNS------CYPARRGPQ--LVCTGSDDGTVKLWDIRKKA-- 186
Query: 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
AI + +V+ + N +++ S G D+ ++WD+R+ + ++ H V
Sbjct: 187 --AIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRG--HADSVTG 241
Query: 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV-----HSHDFNRHLTPFRAEWDP 266
S GS +L+ + DN +R+WD +P V + H+F ++L R W P
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV---RPFAPKERCVKIFQGNVHNFEKNL--LRCSWSP 296
Query: 267 KDPSESLA 274
D S+ A
Sbjct: 297 -DGSKIAA 303
>UNIPROTKB|Q7RXM4 [details] [associations]
symbol:NCU00202 "Coronin" species:367110 "Neurospora crassa
OR74A" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 GO:GO:0005826 GO:GO:0051666
GO:GO:0034316 GO:GO:0005885 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B EMBL:AABX02000001
RefSeq:XP_956587.1 UniGene:Ncr.4234 ProteinModelPortal:Q7RXM4
STRING:Q7RXM4 EnsemblFungi:EFNCRT00000000015 GeneID:3872734
KEGG:ncr:NCU00202 Uniprot:Q7RXM4
Length = 683
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 133 VADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192
V +NF LY DA + + KV + NP +L S D + WD+
Sbjct: 188 VPENFT-LY-TDAEEPADVSPLSKLSGHTRKVGHVLFNPAAENILASSSGDLTVKFWDV- 244
Query: 193 RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
E G + + H +V S +S +G+ ++TTS+D +LR+WD
Sbjct: 245 --ETGQAPIAIKHPDIVQSLSWSANGTMLVTTSRDKKLRVWD 284
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 52 KVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89
K+ ++I H+ V + +NP ND + +AS DG V
Sbjct: 146 KLPDQIPLFRGHTAAVLDTDWNPFNDRLIASASDDGKV 183
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 73/322 (22%), Positives = 126/322 (39%)
Query: 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI-VYGNI--- 62
+ ++ C + H V + P N HI+ + V V+D+ K K G
Sbjct: 110 VTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPD 169
Query: 63 -----HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG------LALSLMNVNPNGWH 111
H + +N G + +AS D TV D+ G + + +
Sbjct: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVV 229
Query: 112 GPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171
W +L+ E VAD+ L + D R+N+ S + L+ ++V L NP
Sbjct: 230 EDVAWHLLH------ESLFGSVADDQK-LMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 172 IQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNR 229
E +L+ G+ D +WD+R L+ + + ++SP IL +S D R
Sbjct: 283 YS-EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRR 341
Query: 230 LRIWD-SIFGNLDSPSR------EIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYIS 281
L +WD S G S E++ H ++ F W+P +P +V I
Sbjct: 342 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF--SWNPNEPWVICSVSEDNIM 399
Query: 282 ENYNGAA-LHPIDFIDITTGQL 302
+ + A ++ + D+TT +L
Sbjct: 400 QIWQMAENIYNDEESDVTTSEL 421
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 80 VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF 139
+ +AS D T+ D+E+G + + G + + ++G+ NP+ ++ V+ +F
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLK-------GHKEY--VFGVSFNPQSNLI-VSGSFDE 152
Query: 140 -LYLVDARTNSRSGEAI-LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG 197
+ + D T GE +I V G+H N L++S D RIWD +
Sbjct: 153 NVRIWDVNT----GECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDTTTGQLL 207
Query: 198 SSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
+++ K V + FSP+G +L + DN LR+W
Sbjct: 208 NTISTEDGKEV-SFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 108 (43.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 160 KGSK--VVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS 217
KG K V G+ NP Q L++S D RIWD+ E + H V +F+
Sbjct: 127 KGHKEYVFGVSFNP-QSNLIVSGSFDENVRIWDVNTGECTKMIS--AHSDPVTGVHFNRD 183
Query: 218 GSKILTTSQDNRLRIWDSIFGNL 240
G+ +++ S D +RIWD+ G L
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQL 206
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 321 HPRDDVLASGS---SRSIFIWR 339
HP ++++ASG+ RS+ IW+
Sbjct: 312 HPTENIIASGALEKDRSVKIWK 333
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 122 (48.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/177 (24%), Positives = 72/177 (40%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P +N ++G + VWD K H V ++ +
Sbjct: 134 VINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAG-HVMTVRDVAVSD 192
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
+ +++ S D TV C DLE ++ G RT + I+P ++ A
Sbjct: 193 RHP-YLFSVSEDKTVKCWDLEKN---QIIRDYYGHLSGVRT------VSIHPTLDLIATA 242
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
+ L D RT R L+ KG + + C P+ P+++ S D R+WD+
Sbjct: 243 GRDSVIKLWDMRT--RIPVITLVGHKGP-INQVQCTPVDPQVV-SSSTDATVRLWDV 295
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 296 DITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVE-QKEEMK 354
D+ G+ + +V+ + ++ LHP++ +AS + I W E S L + E+
Sbjct: 294 DVVAGKTM-KVLTHHKRSVR-ATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTG 351
Query: 355 II 356
II
Sbjct: 352 II 353
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 47/223 (21%), Positives = 98/223 (43%)
Query: 19 HSRRVTCLEFHPTNNHILL---SGDKKGQVGVWD-FYKVSEKIVYGNIHSCIVNNIRFNP 74
H ++ +F T +LL S DK +W+ K S+ ++G++ VN+ F+P
Sbjct: 702 HEEQINHCQFTNTGRRVLLATCSNDKFTNTKLWNPNKKTSQNTMFGHMEP--VNHCCFSP 759
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
ND + +SSDG++ ++ + ++V+ + + G ++
Sbjct: 760 -NDLYLATSSSDGSLKLFEVSSANEWKSIDVDSFFPESDEEIKAMVKCSTWSADGSQIIC 818
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH-CNPIQPELLLSCGNDHFA-RIWDIR 192
+++ D T+ +L+ K S++ + C+ LL+ H+ +W+
Sbjct: 819 AARNTVFVFDVETSD-----LLLELKTSRLSTIQFCHACPNSSLLAVALSHYTVELWNFE 873
Query: 193 RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+ + C H V+ FSP GS +L++S D +R+W++
Sbjct: 874 SSKKKAE-CS-GHLSWVHCVQFSPDGSLLLSSSDDQTIRLWET 914
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 125 (49.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 199 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVS- 255
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
T +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 256 TRSPYLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTIDVLVTC 306
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 307 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVRCQAAEPQIITG-SHDTTIRLWD---L 359
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
AG + L HK+ V + P + S DN ++ W
Sbjct: 360 VAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQW 398
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 320 LHPRDDVLASGSSRSIFIWR 339
LHP ASGS +I W+
Sbjct: 380 LHPLHYTFASGSPDNIKQWK 399
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 108 (43.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 48/228 (21%), Positives = 97/228 (42%)
Query: 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG----NIHSCI 66
V+ + H+R V+ ++F ++ +L S + + +++ I H
Sbjct: 15 VHSQTLTSHNRAVSSVKFS-SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 67 VNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP 126
++++ F+ ++ + +AS D T+ D+ETG + + + N + ++ NP
Sbjct: 74 ISDVAFS-SDARFIVSASDDKTLKLWDVETGSLIKTLIGHTN---------YAFCVNFNP 123
Query: 127 EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFA 186
+ ++ V+ +F + T + + + H V + N L++S D
Sbjct: 124 QSNMI-VSGSFDETVRIWDVTTGKCLKVLPAH--SDPVTAVDFNR-DGSLIVSSSYDGLC 179
Query: 187 RIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
RIWD +L D V+ FSP+G IL + DN LR+W+
Sbjct: 180 RIWDSGTGHCVKTLID-DENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Score = 106 (42.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 63 HSCIVNNIRFNPTNDGTVYA-ASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYG 121
H+ V++++F+ +DG + A AS+D T+ + T V H + +
Sbjct: 23 HNRAVSSVKFS--SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS 80
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181
D + +V +D+ L L D T S + ++ H + V NP Q +++S
Sbjct: 81 SDA---RFIVSASDD-KTLKLWDVETGSLI-KTLIGHTNYAFCVNF--NP-QSNMIVSGS 132
Query: 182 NDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGN 239
D RIWD+ G L LP H V + F+ GS I+++S D RIWDS G+
Sbjct: 133 FDETVRIWDVT---TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 321 HPRDDVLASGS-SRSIFIWRPKEK 343
HP ++++ASGS +++ IW K++
Sbjct: 294 HPTENLIASGSLDKTVRIWTQKKE 317
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 149 SRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKR 207
SR +I H G ++ +P+ ++S D ARIWD + G+ L L H
Sbjct: 138 SRCSASIAGH--GEAILATSFSPVSSSTMVSGSGDSTARIWDC---DTGTPLHTLKGHTS 192
Query: 208 VVNSAYFSPSGSKILTTSQDNRLRIWDSIFGN-LDSP 243
V + +SP+G+ I T S DN +RIWD+ G L +P
Sbjct: 193 WVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAP 229
Score = 116 (45.9 bits), Expect = 0.00087, P = 0.00087
Identities = 46/189 (24%), Positives = 72/189 (38%)
Query: 72 FNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVV 131
F+P + T+ + S D T D +TG L + G +W + + +P ++
Sbjct: 156 FSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLK-------GHTSW--VLAVSYSPNGAMI 206
Query: 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG---LHCNPIQPELLLSCGNDHFARI 188
+ + DA+ G + H K + H L S D RI
Sbjct: 207 ATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRI 266
Query: 189 WDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248
WD+ A L HK V + +G KI T+S D +++W+S G L
Sbjct: 267 WDVISKRADIVLSG--HKGSVTCVRWGGTG-KIYTSSHDRTIKVWNSQTGTLIQTLS--A 321
Query: 249 HSHDFNRHL 257
H+H N HL
Sbjct: 322 HAHRVN-HL 329
Score = 99 (39.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 148 NSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-HK 206
N R G+ I R V C LL+S D ++W++R G DLP HK
Sbjct: 433 NGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVR---TGKLSEDLPGHK 489
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V + +SP G K+ + +D +RIW
Sbjct: 490 DEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/87 (24%), Positives = 34/87 (39%)
Query: 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFN 73
A I H + F P ++ ++SG +WD + H+ V + ++
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDC-DTGTPLHTLKGHTSWVLAVSYS 200
Query: 74 PTNDGTVYAASSDGTVSCTDLETGLAL 100
P N + S D TV D + G AL
Sbjct: 201 P-NGAMIATGSMDNTVRIWDAKKGQAL 226
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 51/187 (27%), Positives = 81/187 (43%)
Query: 12 NCAVIR--Y-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IV 67
N VIR Y H VTCL FHPT IL SG + + ++D+ K S K + I ++
Sbjct: 162 NHPVIRTLYDHVDEVTCLAFHPTEQ-ILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEML 220
Query: 68 NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE 127
+I F+P+ D + + T+ D+ T ++ NP H + Y N
Sbjct: 221 RSISFHPSGD-FILVGTQHPTLRLYDINTFQCF--VSCNPQDQHTDAICSVNYNSSAN-- 275
Query: 128 KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI---QPELLLSCGNDH 184
+ + G + L D +N H G++V C+ I + +LS G D
Sbjct: 276 --MYVTGSKDGCIKLWDGVSNRCITTFEKAH-DGAEV----CSAIFSKNSKYILSSGKDS 328
Query: 185 FARIWDI 191
A++W+I
Sbjct: 329 VAKLWEI 335
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 118 (46.6 bits), Expect = 0.00074, P = 0.00074
Identities = 48/176 (27%), Positives = 73/176 (41%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYG 121
H+ V ++R N T + + A S G++ DLE L +LM N +
Sbjct: 62 HTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICS 110
Query: 122 MDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE--LLLS 179
+D +P V + L D R R G + +R S+ V C P+ L S
Sbjct: 111 LDFHPYGEFVASGSQDTNIKLWDIR---RKG-CVFRYRGHSQAV--RCLRFSPDGKWLAS 164
Query: 180 CGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+DH ++WD L AG + + P H VN F P+ + + S D +R WD
Sbjct: 165 AADDHTVKLWD---LTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V+ L + +L +G +V +W K + I+ H+ V ++R N T +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLN-TPEE 76
Query: 79 TVYAASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ A S G++ DLE L +LM N + +D +P V
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKAN----------ICSLDFHPYGEFVASGSQD 126
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVG-LHCNPIQPELLLSCGNDHFARIWDI 191
+ L D R R G + +R S+ V L +P + L S +DH ++WD+
Sbjct: 127 TNIKLWDIR---RKG-CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183
+N + +++ G + + D ++ ++ H+ + + L +P E + S D
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEA-AKILRTLMGHK--ANICSLDFHPYG-EFVASGSQD 126
Query: 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242
++WDIRR G H + V FSP G + + + D+ +++WD G + S
Sbjct: 127 TNIKLWDIRR--KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 290 HPIDFIDITTGQLVAEVMDPNITTISPVN--KLHPRDDVLASGSS-RSIFIWRPKEKSEL 346
H + D+T G++++E P T PVN + HP + +LASGSS R+I W EK ++
Sbjct: 169 HTVKLWDLTAGKMMSEF--PGHT--GPVNVVEFHPNEYLLASGSSDRTIRFW-DLEKFQV 223
Query: 347 V 347
V
Sbjct: 224 V 224
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
LL+S +D ++WD++ + + DLP H V + +SP G ++ + +D LRIW
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAT---DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 47/172 (27%), Positives = 65/172 (37%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V + F PT + L SG V WD + H V +I ++P DG
Sbjct: 113 HSEAVISVAFSPTGKY-LASGSGDTTVRFWDLSTETPHFTCKG-HRHWVLSISWSP--DG 168
Query: 79 TVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
A+ +G V D TGL + + W +W L+ +NPE V +
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLH---MNPECRYVASSSKD 225
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
G + + D T R E IL S V L LL S D ++W
Sbjct: 226 GSVRVWDT-TAGRC-ERILTGHTQS-VTCLRWGG--DGLLYSASQDRTIKVW 272
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
S G D AR+WD+R A + L H + V S FSP+G + + +DN+ RIWD
Sbjct: 147 SSGFDSLARVWDLRT--ARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88
IL++ G +W+ +V+ KIV H V ++ F+ +D + AS+D T
Sbjct: 77 ILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRT 130
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 82 (33.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 269 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 325
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 326 NRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 81 (33.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + + H VN++R+ P+
Sbjct: 194 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCVQAFETHESDVNSVRYYPS 250
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 251 GDAFA-SGSDDATCRLYDL 268
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 82 (33.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 270 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 326
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 327 NRVSTLRVSPDGTAFCSGSWDHTLRVW 353
Score = 81 (33.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + I H +N++R+ P+
Sbjct: 195 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCIQAFETHESDINSVRYYPS 251
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 252 GDAFA-SGSDDATCRLYDL 269
>UNIPROTKB|Q5AZD9 [details] [associations]
symbol:AN6341.2 "Coronin" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0005826 "actomyosin contractile ring"
evidence=ISS] [GO:0005885 "Arp2/3 protein complex" evidence=ISS]
[GO:0030479 "actin cortical patch" evidence=ISS] [GO:0034316
"negative regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 EMBL:AACD01000107 GO:GO:0005826
GO:GO:0051666 GO:GO:0034316 GO:GO:0005885 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B RefSeq:XP_663945.1
ProteinModelPortal:Q5AZD9 STRING:Q5AZD9 GeneID:2871240
KEGG:ani:AN6341.2 Uniprot:Q5AZD9
Length = 595
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNR 229
NP +L + D+ +IWDI EAG+S L +V S +S +GS ++TTS+D +
Sbjct: 132 NPAAENILATASGDYTVKIWDI---EAGASKLTLNVGDIVQSQSWSANGSLLVTTSRDKK 188
Query: 230 LRIWD 234
LR+WD
Sbjct: 189 LRVWD 193
>ASPGD|ASPL0000000923 [details] [associations]
symbol:AN6341 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0030479 "actin
cortical patch" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0035838 "growing cell tip" evidence=IEA]
[GO:0005826 "actomyosin contractile ring" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000166356
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:LQDRRIA
ProteinModelPortal:C8V0Z9 EnsemblFungi:CADANIAT00006644
Uniprot:C8V0Z9
Length = 611
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNR 229
NP +L + D+ +IWDI EAG+S L +V S +S +GS ++TTS+D +
Sbjct: 148 NPAAENILATASGDYTVKIWDI---EAGASKLTLNVGDIVQSQSWSANGSLLVTTSRDKK 204
Query: 230 LRIWD 234
LR+WD
Sbjct: 205 LRVWD 209
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 83 (34.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 311 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 367
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LRIW
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRIW 394
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + I H +N++R+ P+
Sbjct: 236 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCIQSFETHDSDINSVRYYPS 292
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 293 GDAFA-SGSDDATCRLYDL 310
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 49/215 (22%), Positives = 84/215 (39%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H++ +T L F P H+LLS G+ +WD Y E + + HS + + F+ T
Sbjct: 281 HTKAITSLRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFHITGK- 339
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
T AS D + D ETG +S + P R + NPE +A G
Sbjct: 340 TFLTASYDRQMKLWDTETGQCISRFSTGKT----PHVIRF----NPNPENSHEFLA---G 388
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
+ ++R+GE + + + Q +S +D R W+ +
Sbjct: 389 MSDKKIVQFDTRTGEQVQEYDHHLAAINTLTFVDQNRRFISTSDDKSLRAWEYG-IPVPI 447
Query: 199 SLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
P+ + A P+G + S DN++ ++
Sbjct: 448 KFIAEPYMFALTRAAAHPNGKYVAFQSGDNQIVVY 482
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 320 LHPRDDVLASGSSRSIFIW 338
+ P +ASG S +F W
Sbjct: 510 ISPDGQFIASGDSAGLFSW 528
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 82 (33.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 269 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 325
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 326 NRVSTLRVSPDGTAFCSGSWDHTLRVW 352
Score = 80 (33.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + + H +N++R+ P+
Sbjct: 194 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCVQAFETHESDINSVRYYPS 250
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 251 GDAFA-SGSDDATCRLYDL 268
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 82 (33.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 311 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 367
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + + H VN++R+ P+
Sbjct: 236 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCVQAFETHESDVNSVRYYPS 292
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 293 GDAFA-SGSDDATCRLYDL 310
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 82 (33.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 312 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 368
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 369 NRVSTLRVSPDGTAFCSGSWDHTLRVW 395
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + I H +N++R+ P+
Sbjct: 237 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCIQAFETHESDINSVRYYPS 293
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 294 GDAFA-SGSDDATCRLYDL 311
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 52/226 (23%), Positives = 89/226 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 201 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVSA 258
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
+ +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 259 RSP-YLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTIDVLVTC 308
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 309 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVKCQAAEPQVVTG-SHDTTIRLWD---L 361
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGN 239
AG + L HK+ V + P + S DN ++ W GN
Sbjct: 362 VAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGN 406
>GENEDB_PFALCIPARUM|PFL1975c [details] [associations]
symbol:PFL1975c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 1 MKPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG 60
+K VI D + C I + ++CL ++P N+ I+ SG++ + WD ++++ I+
Sbjct: 201 IKTRKVIKD-LKCKNI--DTNNISCLAWNPIND-IVASGNRTHTISFWDI-RMNKPIISL 255
Query: 61 NIHSCIVNNIRFNPTNDGT-VYAASSDGTVSCTDLET-GLALSLMNVNPNGWHGPRTWRM 118
N H VN I++N N+G + + S D + D+ L S N +
Sbjct: 256 NSHKANVNKIKWN--NNGIYLLSCSKDSLIKLWDIRNFKLLYSYKNDQIQNNKFTSNYEP 313
Query: 119 LYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIH---RKGSKVVGLHCNPIQP 174
Y + NP + + ADN G + N + H K S + L NP+
Sbjct: 314 TY-IAWNPIQNHIFSSADNKGNIKFYSTNDNKCIQTIVSAHGIDNKISSISLLDWNPLG- 371
Query: 175 ELLLSCGNDHFARIW 189
+L S G+D + W
Sbjct: 372 HILTSFGDDKLLKFW 386
>UNIPROTKB|Q8I518 [details] [associations]
symbol:PFL1975c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 1 MKPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG 60
+K VI D + C I + ++CL ++P N+ I+ SG++ + WD ++++ I+
Sbjct: 201 IKTRKVIKD-LKCKNI--DTNNISCLAWNPIND-IVASGNRTHTISFWDI-RMNKPIISL 255
Query: 61 NIHSCIVNNIRFNPTNDGT-VYAASSDGTVSCTDLET-GLALSLMNVNPNGWHGPRTWRM 118
N H VN I++N N+G + + S D + D+ L S N +
Sbjct: 256 NSHKANVNKIKWN--NNGIYLLSCSKDSLIKLWDIRNFKLLYSYKNDQIQNNKFTSNYEP 313
Query: 119 LYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIH---RKGSKVVGLHCNPIQP 174
Y + NP + + ADN G + N + H K S + L NP+
Sbjct: 314 TY-IAWNPIQNHIFSSADNKGNIKFYSTNDNKCIQTIVSAHGIDNKISSISLLDWNPLG- 371
Query: 175 ELLLSCGNDHFARIW 189
+L S G+D + W
Sbjct: 372 HILTSFGDDKLLKFW 386
>UNIPROTKB|F8VV53 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 PANTHER:PTHR10856
HGNC:HGNC:2254 ChiTaRS:CORO1C EMBL:AC007569 IPI:IPI01021948
ProteinModelPortal:F8VV53 SMR:F8VV53 Ensembl:ENST00000552871
ArrayExpress:F8VV53 Bgee:F8VV53 Uniprot:F8VV53
Length = 125
Score = 97 (39.2 bits), Expect = 0.00028, P = 0.00028
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 153 EAILIHRKGSKVVGLHC-NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211
E ++I SK VG+ +P +LLS G D+ IW++ EA +L D+ H ++ +
Sbjct: 16 EPVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDM-HSDMIYN 74
Query: 212 AYFSPSGSKILTTSQDNRLRIWD 234
++ +GS I T S+D ++R+ D
Sbjct: 75 VSWNRNGSLICTASKDKKVRVID 97
Score = 94 (38.1 bits), Expect = 0.00059, P = 0.00059
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
++ HS+RV + +HPT ++LLS + +W+ I ++HS ++ N+ +N
Sbjct: 20 ILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWN- 78
Query: 75 TNDGTVYAASSDGTVSCTD 93
N + AS D V D
Sbjct: 79 RNGSLICTASKDKKVRVID 97
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 105 (42.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 119 LYGMDINPEKGVVLVADNFG-FLYLVDARTNSRSGEAILIHRKGSKVVGLH-CNPIQPEL 176
+Y + +P KG +L + ++ ++L D R R ++ H V G+ C L
Sbjct: 309 VYCLAFSP-KGNILASGSYDEAVFLWDVRAG-RLMRSLPAH--SDPVSGIDFCR--DGTL 362
Query: 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKR--VVNSAYFSPSGSKILTTSQDNRLRIWD 234
++SC D RIWD G L L H+ V + FSP+G IL + D+ +R+WD
Sbjct: 363 VVSCSTDGLIRIWDTA---TGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWD 419
Query: 235 SI 236
I
Sbjct: 420 YI 421
Score = 60 (26.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG 97
HS + +R +P N + +AS+DGT D ETG
Sbjct: 179 HSQPIAQVRISP-NGRWIASASADGTARIWDAETG 212
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 59/262 (22%), Positives = 105/262 (40%)
Query: 16 IRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS-EKIVYGNIHSCIVNNIRFNP 74
++ H+ V ++F T N +L S + +WDF K ++G+ H+ V+ +RF P
Sbjct: 144 LKGHTNAVQDIDFDKTGN-LLASCSADLTIKLWDFQTYDCVKTLHGHDHN--VSCVRFTP 200
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGW--------HGP-----------RT 115
+ D + ++S D T+ + TG + + V W G +T
Sbjct: 201 SGDQLI-SSSRDKTIKVWEAATGYCIKTL-VGHEDWVRKITVSEDGSCIASCSNDQTIKT 258
Query: 116 WRMLYG--MDINPEKGVVLVADNFGFLYLVD---ARTNSRSGEAILIHRKGSKVVGLHCN 170
W ++ G + E V+ F ++D + ++ G++ + G +VG C
Sbjct: 259 WNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVG-QCG 317
Query: 171 PIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNR 229
L + D +IW+ L G L + H V + F P G +L+ D
Sbjct: 318 -----YLATGSRDKTIKIWE---LATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKT 369
Query: 230 LRIWDSIFGNLDSPSREIVHSH 251
+R+WD G E H+H
Sbjct: 370 IRVWDIAQGRCIKTINE-AHTH 390
Score = 99 (39.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
LL SC D ++WD + + +L H V+ F+PSG +++++S+D +++W++
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHN--VSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 236 IFGNLDSPSREIVHSHDFNRHLT 258
G + +V D+ R +T
Sbjct: 220 ATGYC---IKTLVGHEDWVRKIT 239
Score = 61 (26.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 55 EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG 97
EK + +CI N+++F+P+ V +AS D T+ D E+G
Sbjct: 98 EKHILTGHRNCI-NSVKFHPSFSLMV-SASEDATIKVWDFESG 138
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 82 (33.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHK 206
R+ + I+ K S + G + LL + ND+ +WD+ + GS + L H+
Sbjct: 311 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK---GSRVSILFGHE 367
Query: 207 RVVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 368 NRVSTLRVSPDGTAFCSGSWDHTLRVW 394
Score = 80 (33.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + + H +N++R+ P+
Sbjct: 236 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCVQAFETHESDINSVRYYPS 292
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 293 GDAFA-SGSDDATCRLYDL 310
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 49/216 (22%), Positives = 97/216 (44%)
Query: 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVY 81
+ L+ P++ + +L+G V V+D K SE+I+ HS V ++ F+P+ D V+
Sbjct: 225 ILALDLCPSDTNKILTGGADKNVIVFD--KSSEQILATLKGHSKKVTSVVFHPSQD-LVF 281
Query: 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLY 141
+AS D T+ + + ++ + G T G+ ++ +L + + +
Sbjct: 282 SASPDATIRIWSVPNASCVQVVRAH----EGSVT-----GLSLHATGDYLLSSSDDQYWA 332
Query: 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE-LLLSCGN-DHFARIWDIRRLEAGSS 199
D +T G + S L C P+ L+ G D +IWD++ ++
Sbjct: 333 FSDIQT----GRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKER---TN 385
Query: 200 LCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ + P H + S FS +G + T + D+ +++WD
Sbjct: 386 VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 421
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 55/216 (25%), Positives = 91/216 (42%)
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLET----GLALSLMNV--NPNGWHGPRTWRMLYGMD 123
+ +NP G + +AS D T+ D+ T G + + +W +L+
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH--- 239
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN- 182
E VAD+ L + D R+N+ S + + ++V L NP E +L+ G+
Sbjct: 240 ---ESLFGSVADDQK-LMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYS-EFILATGSA 294
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNL 240
D +WD+R L+ + HK + +SP IL +S D RL +WD S G
Sbjct: 295 DKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
Query: 241 DSPSR------EIVHSHD-FNRHLTPFRAEWDPKDP 269
SP E++ H ++ F W+P +P
Sbjct: 354 QSPEDAEDGPPELLFIHGGHTAKISDF--SWNPNEP 387
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 110 (43.8 bits), Expect = 0.00032, P = 0.00032
Identities = 42/147 (28%), Positives = 67/147 (45%)
Query: 133 VADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDI 191
VAD+ L + D R+N+ S + + ++V L NP E +L+ G+ D +WD+
Sbjct: 1 VADDQK-LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDL 58
Query: 192 RRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNLDSPSR---- 245
R L+ + HK + +SP IL +S D RL +WD S G SP
Sbjct: 59 RNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 117
Query: 246 --EIVHSHD-FNRHLTPFRAEWDPKDP 269
E++ H ++ F W+P +P
Sbjct: 118 PPELLFIHGGHTAKISDF--SWNPNEP 142
Score = 93 (37.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V CL F+P + IL +G V +WD + K+ H + ++++P N+
Sbjct: 27 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 86
Query: 79 TVYAASSDGTVSCTDL 94
+ ++ +D ++ DL
Sbjct: 87 ILASSGTDRRLNVWDL 102
Score = 50 (22.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 153 EAILIHR-KGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
E + IH +K+ NP +P ++ S D+ ++W +
Sbjct: 120 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 159
>MGI|MGI:1916230 [details] [associations]
symbol:Wdr53 "WD repeat domain 53" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916230 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AK005105
EMBL:BC028850 IPI:IPI00119193 RefSeq:NP_001172091.1
RefSeq:NP_081174.1 UniGene:Mm.159860 ProteinModelPortal:Q9DB94
SMR:Q9DB94 STRING:Q9DB94 PRIDE:Q9DB94 Ensembl:ENSMUST00000023474
Ensembl:ENSMUST00000178573 GeneID:68980 KEGG:mmu:68980
UCSC:uc007yym.2 CTD:348793 GeneTree:ENSGT00390000011073
HOGENOM:HOG000036744 HOVERGEN:HBG056769 InParanoid:Q9DB94
OMA:VAFRPQR OrthoDB:EOG4J3WH7 NextBio:328343 Bgee:Q9DB94
CleanEx:MM_WDR53 Genevestigator:Q9DB94
GermOnline:ENSMUSG00000022787 Uniprot:Q9DB94
Length = 358
Score = 88 (36.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 177 LLSCG-NDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
+ SCG D RI+ + ++ L H V+ F P S +LT D R+R+WD
Sbjct: 211 IFSCGAEDGKVRIFRVMGVKCERELGFKGHTLGVSQVCFLPESSLLLTGGNDGRIRLWD- 269
Query: 236 IFGNLD----SPSREIVHSHDFNRHLTP 259
+ G ++ SP+R I H R P
Sbjct: 270 VSGKMEKLQKSPARHI-HRKKAKRAACP 296
Score = 72 (30.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 36/177 (20%), Positives = 78/177 (44%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVW--DFYKVSEKIVYGNIHSCIVNNIRFNPTN 76
HS + CL + + ++ SG + G + W D + + G + V ++ F+ +
Sbjct: 9 HSSSILCL--NANKDGLVASGGEGGDLVAWGEDGTPLGHMQLEG---ADDVTSVLFSASC 63
Query: 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136
+YA+ + T+S D+ + L SL + + N + + +N + ++ AD+
Sbjct: 64 PTKLYASHGE-TISVLDVRS-LKGSLDHFHVNE-------EEINCLSLNETESLLASADD 114
Query: 137 FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193
G + ++D + ++ H V P +P+ L+SCG D +W +++
Sbjct: 115 SGAIKILDLE-KKKVTRSLKRHSNICSSVAFR--PQRPQSLVSCGLDMQVMLWSLQK 168
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 67/292 (22%), Positives = 118/292 (40%)
Query: 3 PAHVIP-DQVNCAVIRYHSRRVTCL---EFHPTNNHILLSGDKKGQVGVWDFYKVSEKIV 58
PA ++ D+ + ++ Y S + L +F+ ++L SGD KG V VWD +
Sbjct: 96 PAAILKSDEASASIATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFA 155
Query: 59 YGNIH-SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHG-PRTW 116
+ S V+ + +N N + AS + T T + L ++N++ G G
Sbjct: 156 LPKQNRSSEVHVVSWN--NKVSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAAT 213
Query: 117 RMLYGMDINPEKGVVL---VADNFGFLYLV-DARTNSRSGEAILIHRKGSKVVGLHCNPI 172
+ + +P L + DN + L D R + + H+K + + L P
Sbjct: 214 GAVNSIAWHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAA--LSLSWCPE 271
Query: 173 QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK-RVVNSAYFSPSGS-KILTTSQDNRL 230
P LLS G D A +W++ E G SL P + + PS S ++ S + ++
Sbjct: 272 DPTFLLSSGKDGRAMVWNV---ETGESLGSFPRSGNWYTKSSWCPSNSNRVAVASLEGKV 328
Query: 231 RIWDSIFGNLDSPSREIVH---SHDFNRHLTPFRAEWDPKDPSESLAVIGRY 279
I+ N D + S D N + ++PS SL + ++
Sbjct: 329 SIFSIQSTNTDKSQEASIKGATSIDDNEFFNNLPSIAGSQEPSFSLPLAPKW 380
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 124 (48.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
VI H V C+ P N ++G + +WD K+ H V + +
Sbjct: 198 VISGHLGWVRCIAVEP-GNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVIVS- 254
Query: 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134
T +++ D V C DLE + +HG + +YG+D++P V++
Sbjct: 255 TRSPYLFSCGEDKQVKCWDLEYNKVI-------RHYHGHLS--AVYGLDLHPTLDVLVTC 305
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+ D RT + S + H V + C +P+++ +D R+WD L
Sbjct: 306 SRDSTARIWDVRTKA-SVHTLSGHTNA--VATVRCQAAEPQIITG-SHDTTIRLWD---L 358
Query: 195 EAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
AG + L HK+ V + P + S DN ++ W
Sbjct: 359 VAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDN-IKQW 397
Score = 37 (18.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 320 LHPRDDVLASGSSRSIFIWR 339
LHP ASGS +I W+
Sbjct: 379 LHPLLYTFASGSPDNIKQWK 398
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 83 (34.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 172 IQPE--LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNR 229
I P+ L S G D FA +W+ L +G L L + +N+ FSP+ L+ + D++
Sbjct: 206 ISPDGSLCASGGKDTFACLWE---LSSGKPLYKLEARNTINALAFSPN-KYWLSAATDDK 261
Query: 230 LRIWD 234
+ IWD
Sbjct: 262 IIIWD 266
Score = 76 (31.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNN 69
V+ + + H++ V + F N I+ SG + + VW+ + + G H V+
Sbjct: 103 VSTRLFKGHTQDVMSVAFSSDNRQII-SGSRDATIKVWNTLGECKFTLEGPEAHQDWVSC 161
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLET 96
IRF+P N T+ + S D V D+++
Sbjct: 162 IRFSP-NTPTIVSGSWDNKVKIWDIKS 187
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 55/234 (23%), Positives = 93/234 (39%)
Query: 2 KPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILL-SGDKKGQVGVWDFYKVSEKIVYG 60
KP P +++ VI H V C+ P N +GD+ + +WD K+
Sbjct: 155 KPKWHAPWKLS-RVISGHLGWVRCIAVEPGNEWFATGAGDRV--IKIWDLASGKLKLSLT 211
Query: 61 NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY 120
H V + + T +++ D V C DLE + +HG + +Y
Sbjct: 212 G-HVSTVRGVAVS-TKHPYLFSCGEDRQVKCWDLEYNKVI-------RHYHGHLS--AVY 260
Query: 121 GMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC 180
+ ++P V+ + + D RT + + H + V + P+++
Sbjct: 261 SLALHPTIDVLATSGRDSTARIWDMRTKANV-HTLTGHT--NTVASVVAQATNPQIITG- 316
Query: 181 GNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
+D R+WD L AG S+C L HK+ V S PS + S DN ++ W
Sbjct: 317 SHDSTVRLWD---LAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDN-IKQW 366
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 80 (33.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H V CL+ P T N + G DKK V WD + + + H +N++R+ P+
Sbjct: 194 HGADVLCLDLAPSETGNTFVSGGCDKKAMV--WDM-RSGQCVQAFETHESDINSVRYYPS 250
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 251 GDAFA-SGSDDATCRLYDL 268
Score = 80 (33.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKR 207
R+ + I+ K S + G + LL + ND+ +WD+ + S L H+
Sbjct: 269 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSIL--FGHEN 326
Query: 208 VVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LR+W
Sbjct: 327 RVSTLRVSPDGTAFCSGSWDHTLRVW 352
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 121 (47.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 53/214 (24%), Positives = 86/214 (40%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H T L+F P H++LSG + +WDFY E + H+ + +RF T D
Sbjct: 161 HPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRF--TEDC 218
Query: 79 TVYAASS-DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
+ +SS D +V D ETG + +++N P + NP + +V ++ N
Sbjct: 219 QSFLSSSFDRSVKIWDTETGKVKTRLHLNST----PAD---VESRPTNPHEFIVGLS-NS 270
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG 197
L+ D R + G S ++ L P +S D RIW+ +
Sbjct: 271 KILHY-DDRVSENQGLVQTYDHHLSSILALKYFP-DGSKFISSSEDKTVRIWENQINVPI 328
Query: 198 SSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRL 230
+ D H + + PS + S DNR+
Sbjct: 329 KQISDTAQHSMPFLNVH--PSQNYFCAQSMDNRI 360
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD----SIFGNLDSPSREIVHSHDFN 254
S FS G I + +RL WD + N+ P + + D++
Sbjct: 388 SLAFSGDGRYICSGDSKSRLFTWDWNTSRLLNNIKIPGNKPITQVDWH 435
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 63/315 (20%), Positives = 134/315 (42%)
Query: 31 TNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90
++ L S Q+ +W+ + E H + ++FN + V +A +D TV
Sbjct: 46 SDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLV-SAGTDKTVR 104
Query: 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV--ADNFGFLYLVDARTN 148
D+ETG + + + ++ +D+N +G ++ A + G + + D R+
Sbjct: 105 VWDMETGSCIRNFKSHTD---------IVNSVDVN-RRGPQMICSASDDGTVMVHDMRSK 154
Query: 149 SRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKR 207
+ + I +++ + N ++ CG D+ ++WD+ R + L H+
Sbjct: 155 EAAKKFICKYQQ----TAVTFNDAADNVI--CGGIDNQIKVWDMLRNDVRYVLSG--HRD 206
Query: 208 VVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVH-----SHDFNRHLTPFRA 262
+ S S +G+ +L+ S D L WD P++ +V SH+F ++L +
Sbjct: 207 TITSLSVSHNGNFLLSNSMDCSLMSWDI---RPFVPAQRLVARYQGASHNFEKNL--LKC 261
Query: 263 EWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHP 322
W P+D + R++ +N + + +L + N T + P ++
Sbjct: 262 GWSPRDNYITAGSADRFVYV-WNAKSRACVY-------KLPGHLGSVNCTALHPTQQI-- 311
Query: 323 RDDVLASGSSRSIFI 337
+L++GS ++IF+
Sbjct: 312 ---LLSAGSDKTIFL 323
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 47/218 (21%), Positives = 89/218 (40%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ RV ++FHPT ++ S GQVG+W+ Y + +I+ + F +
Sbjct: 13 HTERVKAVDFHPTEPWVIAS-HYNGQVGIWN-YNTQTLVRSFDINDVPIRACAFIARKNW 70
Query: 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138
V S D V + TG ++ +P+ + + ++P + +L + +
Sbjct: 71 FV-CGSDDFQVRVYNYNTGEKVTQFEAHPD---------YIRALVVHPTQPFLLTSSDDM 120
Query: 139 FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198
+ + + + + H + V+ L NP S D ++W A
Sbjct: 121 TIKCFNWDMSWKCVQTFEGHSR--YVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANF 178
Query: 199 SLCDLPHKRVVNSAYFSPSGSK--ILTTSQDNRLRIWD 234
+L H R VN + P+G K ++T DN +++WD
Sbjct: 179 TL--QAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWD 214
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 54/250 (21%), Positives = 98/250 (39%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY--------G----NI 62
V R H + L+ P +LSG G + ++D S + Y G ++
Sbjct: 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97
Query: 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122
H V +++ P + G ++S D T+ D T + N + + M
Sbjct: 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY----SHHM---S 150
Query: 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN 182
++ + +V V + L D ++ S S + HR+ +++ + +P +L +
Sbjct: 151 PVSTKHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQ--EILAVSWSPRYDYILATASA 207
Query: 183 DHFARIWDIRRLEA---------GSSL-----CDLPHKRVVNSAYFSPSGSKILTTSQDN 228
D ++WD+RR G + H VN F+ G +LT DN
Sbjct: 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267
Query: 229 RLRIWDSIFG 238
R+R+W+S G
Sbjct: 268 RMRLWNSSNG 277
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 80 (33.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 150 RSGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKR 207
R+ + I+ K S + G + LL ND+ +WD+ + S L H+
Sbjct: 271 RADREVAIYSKESIIFGASSVDFSLSGRLLFGGYNDYTINVWDVLKGARVSIL--FGHEN 328
Query: 208 VVNSAYFSPSGSKILTTSQDNRLRIW 233
V++ SP G+ + S D+ LRIW
Sbjct: 329 RVSTLRVSPDGTAFCSGSWDHTLRIW 354
Score = 79 (32.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 19 HSRRVTCLEFHP--TNNHILLSG-DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75
H+ V CL+ P T N + G DKK V WD + + + H +N++R+ P+
Sbjct: 196 HAADVLCLDLAPSETGNTFVSGGCDKKACV--WDM-RTGQCVQSFESHDSDINSVRYYPS 252
Query: 76 NDGTVYAASSDGTVSCTDL 94
D + S D T DL
Sbjct: 253 GDAFA-SGSDDATCRLYDL 270
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 92 (37.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 174 PELLLSCGNDHFAR-IWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRI 232
PE L+S G+D F +W+ + H+++VN YFSP G I + S D +R+
Sbjct: 329 PERLVS-GSDDFTMFLWEPSVSKQPKKRLT-GHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 233 WDSIFG 238
W+ I G
Sbjct: 387 WNGITG 392
Score = 69 (29.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 25/90 (27%), Positives = 38/90 (42%)
Query: 11 VN-CA-VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVN 68
VN C+ I H+ V C+ F P L SG V +WD Y + H V
Sbjct: 98 VNRCSQTIAGHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWDLYTETPLFTCKG-HKNWVL 155
Query: 69 NIRFNPTNDGT-VYAASSDGTVSCTDLETG 97
+ ++P DG + + S G + C + + G
Sbjct: 156 TVAWSP--DGKHLVSGSKSGEICCWNPKKG 183
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 59/240 (24%), Positives = 107/240 (44%)
Query: 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVN 68
D V C +++ H+ +V L++ P N I+ S + G++ VW+ S+K + V
Sbjct: 54 DLVCCRILQGHTGKVYSLDWTPEKNRIV-SASQDGRLIVWNAL-TSQKTHAIKLPCAWVM 111
Query: 69 NIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN--VNPNGWHGPRTWRMLYG----- 121
F+P+ +V+C L++ ++ +N ++ +G H P + RML G
Sbjct: 112 TCAFSPSGQ----------SVACGGLDSVCSIFNLNSPIDKDGNH-PVS-RMLSGHKGYV 159
Query: 122 --MDINPEKGVVLVA---DNFGFLYLVDA--RTNSRSGEAILIHRKGSKVVGLHCNPIQP 174
P++ L+ D L+ + RT+ GE H + V + + P
Sbjct: 160 SSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSS--NP 217
Query: 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
L +S D AR+WD R + + + H+ VN+ F P G++ T S+D R++D
Sbjct: 218 RLFVSGSCDTTARLWDTR-VASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFD 276
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 104 (41.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
V+R H+ V C+ F+P +N +++SG + +W+ K + + HS ++++ FN
Sbjct: 123 VLRGHTNFVFCVNFNPPSN-LIVSGSFDETIRIWEV-KTGKCVRMIKAHSMPISSVHFN- 179
Query: 75 TNDGT-VYAASSDGTVSCTDLETGLALSLM 103
DG+ + +AS DG+ D + G L +
Sbjct: 180 -RDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 51 (23.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 209 VNSAYFSPSGSKILTTSQDNRLRIWD 234
+ SA+ +G I++ S+DN + +WD
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWD 286
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 52/221 (23%), Positives = 94/221 (42%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI-HSCIVNNIRFNPTND 77
H++ V+ + F P H+LLS +V +WD Y S K + + H+ V +I F+ ND
Sbjct: 281 HTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYN-SGKCMRTYMGHAKAVRDICFS--ND 337
Query: 78 GTVY-AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVA 134
G+ + A D + D ETG +S + T ++ Y + +NP+ K +L+A
Sbjct: 338 GSKFLTAGYDKNIKYWDTETGQVISTFS----------TGKIPYVVKLNPDDDKQNILLA 387
Query: 135 DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL 194
+V N+ GE + + V ++ +D R+W+ +
Sbjct: 388 -GMSDKKIVQWDINT--GEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG-I 443
Query: 195 EAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235
PH + S P+G+ + S DN++ I+ +
Sbjct: 444 PVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYST 484
Score = 116 (45.9 bits), Expect = 0.0010, P = 0.0010
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSP 216
H KG V + P Q LLLS G D +IWD+ +G + + H + V FS
Sbjct: 281 HTKG--VSAIRFFPKQGHLLLSAGMDCKVKIWDV--YNSGKCMRTYMGHAKAVRDICFSN 336
Query: 217 SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVI 276
GSK LT D ++ WD+ G + S F+ P+ + +P D +++ +
Sbjct: 337 DGSKFLTAGYDKNIKYWDTETGQVIST---------FSTGKIPYVVKLNPDDDKQNILLA 387
Query: 277 G 277
G
Sbjct: 388 G 388
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 86 (35.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
LL+S +D ++WD++ A DLP H V + +SP G ++ + +D LRIW
Sbjct: 428 LLVSGSSDSTLKVWDVK---AQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 75 (31.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 45/172 (26%), Positives = 63/172 (36%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V + F PT + L SG V WD + H V +I ++P DG
Sbjct: 113 HSEAVISVAFSPTGKY-LASGSGDTTVRFWDLSTETPHFTCQG-HRHWVLSISWSP--DG 168
Query: 79 TVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
A+ +G + D TG + + W +W L+ NPE V +
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHA---NPECRYVASSSKD 225
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
G + + D T R E IL S V L LL S D ++W
Sbjct: 226 GSVRVWDT-TAGRC-ERILTGHTQS-VTCLRWGG--DGLLYSASQDRTIKVW 272
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 30 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 87
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 88 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 136
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 137 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 192
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 193 FVKFSPNGKYILAATLDNTLKLWD 216
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 107 (42.7 bits), Expect = 0.00062, P = 0.00062
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 144 DARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRRLEAGSSLCD 202
D R+N+ S + + ++V L NP E +L+ G+ D +WD+R L+ +
Sbjct: 4 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKLKLHSFE 62
Query: 203 LPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNLDSPSR------EIVHSHD-F 253
HK + +SP IL +S D RL +WD S G SP E++ H
Sbjct: 63 -SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 121
Query: 254 NRHLTPFRAEWDPKDP 269
++ F W+P +P
Sbjct: 122 TAKISDF--SWNPNEP 135
Score = 93 (37.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
H+ V CL F+P + IL +G V +WD + K+ H + ++++P N+
Sbjct: 20 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 79
Query: 79 TVYAASSDGTVSCTDL 94
+ ++ +D ++ DL
Sbjct: 80 ILASSGTDRRLNVWDL 95
Score = 50 (22.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 153 EAILIHR-KGSKVVGLHCNPIQPELLLSCGNDHFARIWDI 191
E + IH +K+ NP +P ++ S D+ ++W +
Sbjct: 113 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 152
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 85 (35.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
LL+S +D ++WD++ A DLP H V + +SP G ++ + +D LRIW
Sbjct: 430 LLVSGSSDSTLKVWDVK---AQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 76 (31.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 45/172 (26%), Positives = 64/172 (37%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V + F PT + L SG V WD + H V +I ++P DG
Sbjct: 115 HSEAVISVAFSPTGKY-LASGSGDTTVRFWDLSTETPHFTCKG-HRHWVLSISWSP--DG 170
Query: 79 TVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
A+ +G + D TG + + W +W L+ +NPE V +
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLH---MNPECRYVASSSKD 227
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
G + + D T R E IL S V L LL S D ++W
Sbjct: 228 GSVRVWDT-TAGRC-ERILTGHTQS-VTCLRWGG--DGLLYSASQDRTIKVW 274
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 79 (32.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRF 72
+V++ H + L+F P+N ++ ++G +WD + GN +N+I F
Sbjct: 141 SVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSD--INSISF 198
Query: 73 NPTNDGTVYAASSDGTVSCTDL 94
P+N V A DG C D+
Sbjct: 199 FPSNADFVTGAE-DGIARCFDI 219
Score = 77 (32.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236
D AR +DIR A P +NS FS SG K+L ++D +WDSI
Sbjct: 211 DGIARCFDIRA-SAEIFQYSSPSSSPINSVLFSKSG-KLLFIAKDKTCEVWDSI 262
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + + S D T+
Sbjct: 83 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSRLLVSGSDDKTLKV 140
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
+L TG +L + + N ++ + NP+ ++ V+ +F + + D RT +
Sbjct: 141 WELSTGKSLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVRTG-K 189
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 190 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 245
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWD 269
>GENEDB_PFALCIPARUM|PFL2460w [details] [associations]
symbol:PFL2460w "coronin" species:5833
"Plasmodium falciparum" [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0000910 "cytokinesis" evidence=ISS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0003779 "actin
binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910
EMBL:AE014188 GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL--- 194
G + ++ R+ I + S ++ L NP E+L SC D RIW+IR
Sbjct: 51 GMIGVIRLENQVRNPPVIKLKSHTSPILDLSFNPCYSEILASCSEDMSIRIWEIRHEDEN 110
Query: 195 --EAGSSLCDLP-HKRVVNSAYFSPSGSKILT-TSQDNRLRIWD 234
E LC L HK+ VN ++P IL+ TS D+ + IWD
Sbjct: 111 VNEVKDPLCILNGHKKKVNILSWNPMNYFILSSTSFDSSVNIWD 154
>UNIPROTKB|Q8I4S2 [details] [associations]
symbol:PFL2460w "Coronin" species:36329 "Plasmodium
falciparum 3D7" [GO:0000910 "cytokinesis" evidence=ISS] [GO:0003779
"actin binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910 EMBL:AE014188
GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRL--- 194
G + ++ R+ I + S ++ L NP E+L SC D RIW+IR
Sbjct: 51 GMIGVIRLENQVRNPPVIKLKSHTSPILDLSFNPCYSEILASCSEDMSIRIWEIRHEDEN 110
Query: 195 --EAGSSLCDLP-HKRVVNSAYFSPSGSKILT-TSQDNRLRIWD 234
E LC L HK+ VN ++P IL+ TS D+ + IWD
Sbjct: 111 VNEVKDPLCILNGHKKKVNILSWNPMNYFILSSTSFDSSVNIWD 154
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 32 NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91
N L S + +W Y + H ++++ ++ ++ + +AS D T+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWS-SDSNLLVSASDDKTLKI 113
Query: 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-FLYLVDARTNSR 150
D+ +G L + + N ++ + NP+ ++ V+ +F + + D +T +
Sbjct: 114 WDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLI-VSGSFDESVRIWDVKTG-K 162
Query: 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN 210
+ + H V +H N L++S D RIWD + +L D V+
Sbjct: 163 CLKTLPAH--SDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVS 218
Query: 211 SAYFSPSGSKILTTSQDNRLRIWD 234
FSP+G IL + DN L++WD
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWD 242
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 92 (37.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
E L+S +D +WD ++ + H++VVN A FSP G I T S D+ +R+WD
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMH-GHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Query: 235 SIFG 238
G
Sbjct: 418 GKTG 421
Score = 68 (29.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 21/94 (22%), Positives = 45/94 (47%)
Query: 16 IRYHSRRVTCLEFHP------TNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNN 69
+R H++ + L + P + ++L SG K V +W+ K+ + + H+ +
Sbjct: 216 LRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNV-KLRTLLFTLSGHTAPITC 274
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLETGLALSLM 103
+R+ N +Y++S D T+ D + G L ++
Sbjct: 275 VRWGGQN--WIYSSSYDKTIRIWDAKDGKCLHIL 306
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 85 (35.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
LL+S +D ++WD++ A DLP H V + +SP G ++ + +D LRIW
Sbjct: 428 LLVSGSSDSTLKVWDVK---AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 75 (31.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 45/172 (26%), Positives = 63/172 (36%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V + F PT + L SG V WD + H V +I ++P DG
Sbjct: 113 HSEAVISVAFSPTGKY-LASGSGDTTVRFWDLSTETPHFTCKG-HRHWVLSISWSP--DG 168
Query: 79 TVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
A+ +G + D TG + + W +W L+ NPE V +
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHA---NPECRYVASSSKD 225
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
G + + D T R E IL S V L LL S D ++W
Sbjct: 226 GSVRIWDT-TAGRC-ERILTGHTQS-VTCLRWGG--DGLLYSASQDRTIKVW 272
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 85 (35.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 176 LLLSCGNDHFARIWDIRRLEAGSSLCDLP-HKRVVNSAYFSPSGSKILTTSQDNRLRIW 233
LL+S +D ++WD++ + + DLP H V + +SP G ++ + +D LRIW
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLST---DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 75 (31.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 42/172 (24%), Positives = 62/172 (36%)
Query: 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG 78
HS V + F PT + L SG V WD + H V +I ++P DG
Sbjct: 114 HSEAVISVAFSPTGKY-LASGSGDTTVRFWDLSTETPHFTCQG-HRHWVLSISWSP--DG 169
Query: 79 TVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137
A+ +G + D TG + + W +W L+ NPE V +
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHA---NPECRYVASSSKD 226
Query: 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIW 189
G + + D T R + H + V L LL S D ++W
Sbjct: 227 GSVRVWDT-TAGRCERTLTGHAQS--VTCLRWGG--DGLLYSASQDRTIKVW 273
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 83 (34.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 7 IPDQ-VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDF------YKVSEKIVY 59
+P+Q V A + HS VT L P N ILLSG + + +W+ Y V+++ +
Sbjct: 1 MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 60 GNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG 97
G HS V++ + + +AS D T+ DLE G
Sbjct: 61 G--HSHFVSDCALS-FDSHYALSASWDKTIRLWDLEKG 95
Score = 72 (30.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 178 LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+S G D ++WD+ +S H V++ SP GS + +D L +WD
Sbjct: 166 VSAGWDKAVKVWDLETFSLRTS--HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
>ASPGD|ASPL0000073481 [details] [associations]
symbol:AN4639 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0031931 "TORC1
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004083 InterPro:IPR015943 InterPro:IPR016024
PRINTS:PR01547 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001303 EMBL:AACD01000079 eggNOG:NOG269318
HOGENOM:HOG000184479 KO:K07204 OMA:AKRIMPW OrthoDB:EOG4PG97X
PANTHER:PTHR12848 RefSeq:XP_662243.1 ProteinModelPortal:Q5B491
STRING:Q5B491 EnsemblFungi:CADANIAT00005793 GeneID:2872440
KEGG:ani:AN4639.2 Uniprot:Q5B491
Length = 1431
Score = 125 (49.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 54/245 (22%), Positives = 113/245 (46%)
Query: 28 FHPTNNHILLSGDKKGQVGVWDF--YKVSEKIVYGNIHSCIVNNIRF-NPTNDGTVYAAS 84
FH +HI ++ D+ + +WD+ +K + GN +N +R+ N + + S
Sbjct: 1111 FHQFEDHIAVADDRD-TIAIWDWQNHKRLNRFSNGNPLGSKINEVRYINEDDQALLMTGS 1169
Query: 85 SDGTV-------SCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136
SDG + S D+E A +L + P+ R ++ +D +G LVA +
Sbjct: 1170 SDGVLKVFRNYESAKDVEIVTAFRALPELIPSN----RNAGLV--LDWQQGQGKALVAGD 1223
Query: 137 FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA 196
+ + +A T + + + R GS + L + + + ++ D R++D +RL+
Sbjct: 1224 VKVIRVWNAATEVCTTD--IPARSGSCITSLTSDQVAGNIFVAGFGDGAVRVFD-QRLKP 1280
Query: 197 GSSLCDL--PHKRVVNSAYFSPSGSK-ILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDF 253
+S+ + HK+ + + + G + +++ S++ +R+WD +D+P I + D
Sbjct: 1281 TASMVKVWREHKQWITNVHMQRGGLRELISGSRNGEIRLWDL---RMDNPISTIYGTRDT 1337
Query: 254 NRHLT 258
R L+
Sbjct: 1338 LRTLS 1342
Score = 43 (20.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 5 HVIPDQVNCAVIRYHSRRVTCLEFH 29
H+ P Q + A I H R T +E H
Sbjct: 44 HIPPRQRSPAPISNHHRSFTTVEHH 68
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 54/216 (25%), Positives = 90/216 (41%)
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLET----GLALSLMNV--NPNGWHGPRTWRMLYGMD 123
+ +NP G + +AS D T+ D+ G + + +W +L+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH--- 239
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN- 182
E VAD+ L + D R+N+ S + + ++V L NP E +L+ G+
Sbjct: 240 ---ESLFGSVADDQK-LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSA 294
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNL 240
D +WD+R L+ + HK + +SP IL +S D RL +WD S G
Sbjct: 295 DKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
Query: 241 DSPSR------EIVHSHD-FNRHLTPFRAEWDPKDP 269
SP E++ H ++ F W+P +P
Sbjct: 354 QSPEDAEDGPPELLFIHGGHTAKISDF--SWNPNEP 387
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 54/216 (25%), Positives = 90/216 (41%)
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLET----GLALSLMNV--NPNGWHGPRTWRMLYGMD 123
+ +NP G + +AS D T+ D+ G + + +W +L+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH--- 239
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN- 182
E VAD+ L + D R+N+ S + + ++V L NP E +L+ G+
Sbjct: 240 ---ESLFGSVADDQK-LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSA 294
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNL 240
D +WD+R L+ + HK + +SP IL +S D RL +WD S G
Sbjct: 295 DKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
Query: 241 DSPSR------EIVHSHD-FNRHLTPFRAEWDPKDP 269
SP E++ H ++ F W+P +P
Sbjct: 354 QSPEDAEDGPPELLFIHGGHTAKISDF--SWNPNEP 387
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 54/216 (25%), Positives = 90/216 (41%)
Query: 70 IRFNPTNDGTVYAASSDGTVSCTDLET----GLALSLMNV--NPNGWHGPRTWRMLYGMD 123
+ +NP G + +AS D T+ D+ G + + +W +L+
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLH--- 239
Query: 124 INPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN- 182
E VAD+ L + D R+N+ S + + ++V L NP E +L+ G+
Sbjct: 240 ---ESLFGSVADDQK-LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSA 294
Query: 183 DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWD-SIFGNL 240
D +WD+R L+ + HK + +SP IL +S D RL +WD S G
Sbjct: 295 DKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
Query: 241 DSPSR------EIVHSHD-FNRHLTPFRAEWDPKDP 269
SP E++ H ++ F W+P +P
Sbjct: 354 QSPEDAEDGPPELLFIHGGHTAKISDF--SWNPNEP 387
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 102 (41.0 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 177 LLSCGNDHFARIWDIR--RLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234
+ S G+DH RIWDIR RL + H VN F PSG+ ++T S D ++I D
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQV----HSCGVNCLSFHPSGNSLVTASSDGTVKILD 256
Query: 235 SIFGNL 240
+ G L
Sbjct: 257 LVEGRL 262
Score = 56 (24.8 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 17 RY--HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74
RY H VT L+F P N +L S + V +W + + + H+ V ++ F+
Sbjct: 55 RYVGHKDVVTSLQFSPQGN-LLASASRDKTVRLWVLDRKGKSSEF-KAHTAPVRSVDFSA 112
Query: 75 TNDGT-VYAASSDGTV 89
DG + AS D ++
Sbjct: 113 --DGQFLVTASEDKSI 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 396 371 0.00086 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 191
No. of states in DFA: 620 (66 KB)
Total size of DFA: 272 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.90u 0.17s 32.07t Elapsed: 00:00:01
Total cpu time: 31.96u 0.17s 32.13t Elapsed: 00:00:01
Start: Fri May 10 04:52:40 2013 End: Fri May 10 04:52:41 2013
WARNINGS ISSUED: 1