Query 016032
Match_columns 396
No_of_seqs 706 out of 1964
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 06:43:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 4E-48 1.4E-52 341.7 33.5 292 8-340 96-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 2.3E-47 7.8E-52 325.5 34.2 293 10-341 22-320 (321)
3 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-46 3.6E-51 325.2 35.1 314 11-349 6-342 (345)
4 4e54_B DNA damage-binding prot 100.0 3.1E-47 1.1E-51 339.1 32.4 320 11-345 110-433 (435)
5 3iz6_a 40S ribosomal protein R 100.0 4.8E-47 1.6E-51 331.7 31.5 319 5-345 51-378 (380)
6 2ynn_A Coatomer subunit beta'; 100.0 2.3E-46 7.7E-51 317.4 34.7 294 12-343 5-303 (304)
7 1got_B GT-beta; complex (GTP-b 100.0 1.1E-46 3.7E-51 324.5 32.7 289 11-339 46-340 (340)
8 2pbi_B Guanine nucleotide-bind 100.0 5.4E-46 1.9E-50 321.6 33.6 292 11-339 55-354 (354)
9 3frx_A Guanine nucleotide-bind 100.0 6.8E-46 2.3E-50 316.5 33.5 293 11-343 8-318 (319)
10 4ery_A WD repeat-containing pr 100.0 4.8E-45 1.6E-49 310.9 37.2 299 7-341 10-311 (312)
11 4g56_B MGC81050 protein; prote 100.0 6.3E-46 2.2E-50 321.4 28.8 304 3-344 29-345 (357)
12 2xzm_R RACK1; ribosome, transl 100.0 1E-44 3.6E-49 312.6 33.7 296 11-344 12-342 (343)
13 1nr0_A Actin interacting prote 100.0 1E-44 3.5E-49 336.0 35.9 318 10-352 137-579 (611)
14 2hes_X YDR267CP; beta-propelle 100.0 2E-44 6.8E-49 309.0 34.5 304 9-342 3-328 (330)
15 1nr0_A Actin interacting prote 100.0 3.2E-44 1.1E-48 332.7 35.4 310 5-341 175-610 (611)
16 3ei3_B DNA damage-binding prot 100.0 1.1E-43 3.6E-48 311.5 36.6 316 8-342 61-382 (383)
17 4gqb_B Methylosome protein 50; 100.0 3.1E-44 1E-48 308.3 30.5 293 17-344 27-333 (344)
18 4aow_A Guanine nucleotide-bind 100.0 4.6E-44 1.6E-48 308.7 31.6 297 11-344 29-339 (340)
19 1erj_A Transcriptional repress 100.0 4.8E-43 1.6E-47 307.8 34.2 296 17-343 61-390 (393)
20 3dm0_A Maltose-binding peripla 100.0 5.2E-43 1.8E-47 329.8 33.1 293 13-341 375-692 (694)
21 3zwl_B Eukaryotic translation 100.0 1.7E-42 5.9E-47 302.1 33.4 300 11-349 23-353 (369)
22 3i2n_A WD repeat-containing pr 100.0 8.6E-42 2.9E-46 296.5 29.8 303 12-345 10-356 (357)
23 4a11_B DNA excision repair pro 100.0 8.8E-41 3E-45 295.4 36.2 318 5-354 28-377 (408)
24 2ynn_A Coatomer subunit beta'; 100.0 6.9E-41 2.3E-45 283.7 30.2 263 61-358 10-275 (304)
25 1gxr_A ESG1, transducin-like e 100.0 2.2E-40 7.6E-45 285.2 32.5 293 5-340 36-335 (337)
26 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-40 3.8E-45 291.2 29.4 298 15-346 3-365 (372)
27 2ymu_A WD-40 repeat protein; u 100.0 5.6E-40 1.9E-44 303.4 34.8 282 10-339 293-577 (577)
28 2ymu_A WD-40 repeat protein; u 100.0 1.3E-39 4.3E-44 301.0 36.7 301 9-358 251-554 (577)
29 1sq9_A Antiviral protein SKI8; 100.0 7.5E-41 2.6E-45 294.9 26.9 311 11-344 7-397 (397)
30 2pm9_A Protein WEB1, protein t 100.0 2.7E-40 9.1E-45 293.2 29.3 294 18-343 65-415 (416)
31 4gqb_B Methylosome protein 50; 100.0 1.4E-39 4.6E-44 279.4 31.5 251 15-301 77-333 (344)
32 3k26_A Polycomb protein EED; W 100.0 1.5E-39 5.1E-44 283.3 31.9 306 14-342 12-366 (366)
33 1vyh_C Platelet-activating fac 100.0 6.4E-40 2.2E-44 289.3 29.7 255 4-297 134-409 (410)
34 3gre_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 294.0 28.5 313 5-339 48-437 (437)
35 1r5m_A SIR4-interacting protei 100.0 1E-39 3.5E-44 290.1 31.1 302 4-341 29-424 (425)
36 3odt_A Protein DOA1; ubiquitin 100.0 5.5E-39 1.9E-43 273.6 32.8 296 9-352 7-306 (313)
37 3dwl_C Actin-related protein 2 100.0 2.1E-40 7E-45 290.0 23.9 254 14-298 5-280 (377)
38 2pm9_A Protein WEB1, protein t 100.0 4.7E-40 1.6E-44 291.6 26.0 299 19-348 11-343 (416)
39 4gga_A P55CDC, cell division c 100.0 8.3E-39 2.8E-43 283.5 33.7 290 23-351 108-404 (420)
40 3vl1_A 26S proteasome regulato 100.0 8E-39 2.7E-43 284.1 33.6 303 5-342 83-419 (420)
41 2pm7_B Protein transport prote 100.0 8.5E-39 2.9E-43 269.9 31.6 257 13-341 2-284 (297)
42 3ow8_A WD repeat-containing pr 100.0 5E-39 1.7E-43 274.0 30.2 246 13-297 73-319 (321)
43 3f3f_A Nucleoporin SEH1; struc 100.0 5E-39 1.7E-43 278.0 30.4 308 13-349 4-344 (351)
44 3v7d_B Cell division control p 100.0 1.8E-38 6.3E-43 285.4 34.2 300 11-356 112-436 (464)
45 4aez_A CDC20, WD repeat-contai 100.0 1.2E-38 4.2E-43 280.8 32.0 295 15-350 86-388 (401)
46 3bg1_A Protein SEC13 homolog; 100.0 1.1E-39 3.6E-44 277.9 23.1 257 14-341 7-292 (316)
47 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-38 8.4E-43 304.0 34.3 311 12-360 5-320 (814)
48 4h5i_A Guanine nucleotide-exch 100.0 1.6E-38 5.4E-43 275.7 29.7 296 20-343 14-344 (365)
49 1got_B GT-beta; complex (GTP-b 100.0 2.7E-38 9.4E-43 272.1 30.9 255 5-296 82-340 (340)
50 3frx_A Guanine nucleotide-bind 100.0 3.1E-38 1E-42 269.2 29.6 257 11-300 56-318 (319)
51 3dw8_B Serine/threonine-protei 100.0 3.2E-38 1.1E-42 282.5 30.9 303 19-341 27-445 (447)
52 4ggc_A P55CDC, cell division c 100.0 7.8E-38 2.7E-42 267.1 31.9 283 23-344 28-317 (318)
53 4g56_B MGC81050 protein; prote 100.0 2.9E-38 9.8E-43 273.4 29.3 254 13-301 87-345 (357)
54 4ery_A WD repeat-containing pr 100.0 2.1E-37 7.1E-42 263.7 33.7 264 60-358 19-284 (312)
55 3vl1_A 26S proteasome regulato 100.0 2.4E-38 8.1E-43 281.0 28.7 285 22-344 58-367 (420)
56 1gxr_A ESG1, transducin-like e 100.0 5E-38 1.7E-42 270.5 29.8 300 19-354 8-308 (337)
57 2j04_B YDR362CP, TAU91; beta p 100.0 1E-38 3.5E-43 287.3 26.3 294 14-343 201-518 (524)
58 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-38 2E-42 314.2 34.5 317 4-348 641-1040(1249)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-37 5.2E-42 267.9 31.4 266 16-306 57-342 (345)
60 1yfq_A Cell cycle arrest prote 100.0 1.9E-37 6.4E-42 267.6 31.5 293 13-339 4-321 (342)
61 3iz6_a 40S ribosomal protein R 100.0 4.9E-38 1.7E-42 274.7 25.7 281 43-356 46-347 (380)
62 3mmy_A MRNA export factor; mRN 100.0 3E-37 1E-41 268.8 30.1 306 5-342 24-346 (368)
63 1erj_A Transcriptional repress 100.0 5.4E-37 1.9E-41 269.3 31.5 267 5-300 90-390 (393)
64 2pbi_B Guanine nucleotide-bind 100.0 8.8E-37 3E-41 263.9 30.7 255 5-296 91-354 (354)
65 3jrp_A Fusion protein of prote 100.0 8.1E-37 2.8E-41 267.3 30.0 265 11-346 2-291 (379)
66 2xzm_R RACK1; ribosome, transl 100.0 2.5E-36 8.6E-41 260.3 32.5 261 11-301 67-342 (343)
67 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-37 2.9E-41 293.0 32.2 212 14-241 11-246 (902)
68 2oaj_A Protein SNI1; WD40 repe 100.0 5.2E-37 1.8E-41 294.4 30.7 324 5-347 84-610 (902)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.5E-36 1.2E-40 268.9 34.0 287 10-349 108-398 (445)
70 3sfz_A APAF-1, apoptotic pepti 100.0 8.7E-37 3E-41 305.6 33.1 294 12-343 607-914 (1249)
71 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-36 8.2E-41 269.1 32.1 285 15-351 128-423 (435)
72 1pgu_A Actin interacting prote 100.0 1E-36 3.5E-41 283.7 29.9 318 5-357 188-588 (615)
73 3v7d_B Cell division control p 100.0 7E-36 2.4E-40 268.6 31.8 295 5-339 147-460 (464)
74 2hes_X YDR267CP; beta-propelle 100.0 9.7E-36 3.3E-40 255.0 30.4 257 12-299 48-328 (330)
75 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.3E-35 4.6E-40 265.1 32.4 290 5-343 144-443 (445)
76 1pgu_A Actin interacting prote 100.0 3.5E-36 1.2E-40 280.1 29.6 302 17-358 15-344 (615)
77 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-36 9.1E-41 266.1 24.5 291 21-345 35-345 (402)
78 3gre_A Serine/threonine-protei 100.0 1E-35 3.6E-40 265.4 25.1 291 27-352 34-369 (437)
79 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-34 5.3E-39 249.9 30.0 295 3-344 2-338 (355)
80 3mkq_A Coatomer beta'-subunit; 100.0 1E-34 3.4E-39 278.9 31.6 304 4-343 39-387 (814)
81 3jro_A Fusion protein of prote 100.0 6.7E-35 2.3E-39 276.1 29.8 263 13-346 2-289 (753)
82 4aez_A CDC20, WD repeat-contai 100.0 1.5E-34 5.1E-39 254.7 29.9 266 5-309 118-390 (401)
83 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-35 7.5E-40 265.6 22.4 307 15-355 129-485 (524)
84 3dm0_A Maltose-binding peripla 100.0 2.9E-34 1E-38 270.3 30.6 259 11-298 421-692 (694)
85 3k26_A Polycomb protein EED; W 100.0 4.1E-35 1.4E-39 255.3 22.8 269 5-298 49-365 (366)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-34 6.5E-39 254.2 26.8 257 12-302 73-345 (402)
87 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.2E-34 1.8E-38 255.0 29.6 295 20-342 4-391 (450)
88 3lrv_A PRE-mRNA-splicing facto 100.0 4.3E-34 1.5E-38 246.4 27.4 297 2-340 11-331 (343)
89 1sq9_A Antiviral protein SKI8; 100.0 1.4E-34 4.9E-39 254.7 24.6 280 12-301 54-397 (397)
90 2xyi_A Probable histone-bindin 100.0 1.2E-33 4.1E-38 251.0 29.7 274 13-343 121-411 (430)
91 3dwl_C Actin-related protein 2 100.0 5E-35 1.7E-39 255.9 20.1 256 62-342 9-281 (377)
92 3ei3_B DNA damage-binding prot 100.0 3.8E-33 1.3E-37 244.4 31.3 262 5-299 101-382 (383)
93 1k8k_C P40, ARP2/3 complex 41 100.0 1.7E-33 5.7E-38 245.7 27.6 277 5-303 35-365 (372)
94 2j04_A TAU60, YPL007P, hypothe 100.0 1E-33 3.5E-38 248.8 25.0 268 17-341 12-296 (588)
95 4gga_A P55CDC, cell division c 100.0 1.8E-32 6.3E-37 242.8 33.4 267 5-309 130-405 (420)
96 3zwl_B Eukaryotic translation 100.0 3.4E-33 1.2E-37 243.3 28.3 272 4-306 58-353 (369)
97 4e54_B DNA damage-binding prot 100.0 2.8E-33 9.5E-38 249.1 27.7 266 5-303 147-434 (435)
98 3i2n_A WD repeat-containing pr 100.0 5.6E-33 1.9E-37 240.9 28.6 276 5-302 49-356 (357)
99 1yfq_A Cell cycle arrest prote 100.0 3.7E-33 1.3E-37 240.6 26.6 259 60-358 7-299 (342)
100 4aow_A Guanine nucleotide-bind 100.0 1.9E-32 6.5E-37 236.0 30.3 260 11-301 77-339 (340)
101 1r5m_A SIR4-interacting protei 100.0 8.5E-33 2.9E-37 245.5 28.7 257 19-298 107-424 (425)
102 3dw8_B Serine/threonine-protei 100.0 2.5E-33 8.7E-38 250.7 24.7 269 62-347 26-378 (447)
103 3odt_A Protein DOA1; ubiquitin 100.0 2E-32 6.7E-37 233.0 29.0 257 56-355 10-268 (313)
104 2pm7_B Protein transport prote 100.0 1.9E-32 6.6E-37 231.0 28.3 215 10-236 43-284 (297)
105 4a11_B DNA excision repair pro 100.0 5.9E-32 2E-36 238.8 30.9 287 18-342 97-405 (408)
106 3jrp_A Fusion protein of prote 100.0 2.7E-32 9.1E-37 238.6 27.8 221 9-239 44-289 (379)
107 1l0q_A Surface layer protein; 100.0 3.6E-31 1.2E-35 232.5 34.1 299 5-345 17-345 (391)
108 1l0q_A Surface layer protein; 100.0 1.8E-31 6.2E-36 234.4 31.5 280 34-355 3-288 (391)
109 2j04_A TAU60, YPL007P, hypothe 100.0 5.5E-33 1.9E-37 244.2 20.9 252 18-331 83-349 (588)
110 3bws_A Protein LP49; two-domai 100.0 1.6E-31 5.5E-36 238.0 29.5 290 12-342 115-432 (433)
111 4gq1_A NUP37; propeller, trans 100.0 4.6E-33 1.6E-37 244.1 18.9 266 19-341 88-388 (393)
112 3bg1_A Protein SEC13 homolog; 100.0 2.5E-32 8.7E-37 232.3 22.2 223 5-236 40-292 (316)
113 4ggc_A P55CDC, cell division c 100.0 2.2E-30 7.6E-35 220.9 32.9 258 5-300 50-316 (318)
114 4h5i_A Guanine nucleotide-exch 100.0 1.6E-31 5.5E-36 231.7 25.9 206 19-238 132-344 (365)
115 3mmy_A MRNA export factor; mRN 100.0 1.2E-30 4.1E-35 227.1 30.5 274 49-357 25-319 (368)
116 1p22_A F-BOX/WD-repeat protein 100.0 6.1E-31 2.1E-35 234.2 28.9 263 5-306 158-421 (435)
117 2w18_A PALB2, fancn, partner a 100.0 2.3E-30 7.8E-35 213.9 27.8 295 12-340 27-355 (356)
118 3jro_A Fusion protein of prote 100.0 1.1E-30 3.8E-35 247.3 27.1 222 9-240 42-288 (753)
119 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.7E-34 227.1 28.9 265 64-354 4-356 (450)
120 2xyi_A Probable histone-bindin 100.0 1.3E-29 4.6E-34 225.0 28.1 218 10-240 171-413 (430)
121 3f3f_A Nucleoporin SEH1; struc 100.0 8.1E-30 2.8E-34 220.1 25.4 226 11-240 48-340 (351)
122 3lrv_A PRE-mRNA-splicing facto 100.0 8.2E-30 2.8E-34 219.6 24.8 217 5-239 63-294 (343)
123 1nir_A Nitrite reductase; hemo 100.0 1.1E-27 3.9E-32 217.2 30.3 287 27-346 144-462 (543)
124 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-27 6.3E-32 205.6 30.0 249 21-302 59-339 (355)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.3E-27 4.3E-32 210.7 28.6 299 19-358 61-402 (415)
126 3bws_A Protein LP49; two-domai 100.0 8.3E-28 2.8E-32 214.0 26.9 253 5-298 149-431 (433)
127 2w18_A PALB2, fancn, partner a 100.0 1.7E-28 5.9E-33 202.8 20.0 201 21-235 112-355 (356)
128 1nir_A Nitrite reductase; hemo 100.0 1.1E-26 3.6E-31 210.9 33.2 327 5-352 164-524 (543)
129 4gq1_A NUP37; propeller, trans 100.0 2.2E-28 7.6E-33 214.4 21.2 219 13-236 129-388 (393)
130 3u4y_A Uncharacterized protein 100.0 8.3E-25 2.8E-29 187.5 32.9 285 26-345 3-307 (331)
131 1ri6_A Putative isomerase YBHE 100.0 1.5E-25 5E-30 193.1 28.1 285 34-344 6-312 (343)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.4E-26 2.2E-30 199.8 26.1 273 5-324 98-409 (415)
133 2ecf_A Dipeptidyl peptidase IV 99.9 4.8E-25 1.6E-29 209.5 28.0 291 20-349 36-421 (741)
134 1pby_B Quinohemoprotein amine 99.9 6.5E-25 2.2E-29 188.5 25.5 280 34-352 2-320 (337)
135 3vgz_A Uncharacterized protein 99.9 2.8E-24 9.5E-29 185.9 26.4 281 19-331 39-332 (353)
136 2z3z_A Dipeptidyl aminopeptida 99.9 2.4E-24 8.3E-29 203.5 25.6 291 21-344 82-437 (706)
137 3u4y_A Uncharacterized protein 99.9 1.1E-23 3.7E-28 180.5 26.8 272 5-302 25-307 (331)
138 2ojh_A Uncharacterized protein 99.9 9.4E-24 3.2E-28 177.7 25.0 256 38-331 17-290 (297)
139 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-24 1.1E-28 203.4 22.8 292 21-342 17-393 (723)
140 3hfq_A Uncharacterized protein 99.9 7.5E-23 2.6E-27 176.5 28.9 279 42-346 15-323 (347)
141 1ri6_A Putative isomerase YBHE 99.9 5.1E-23 1.7E-27 177.1 25.8 252 17-301 34-312 (343)
142 1jmx_B Amine dehydrogenase; ox 99.9 7.7E-23 2.6E-27 176.5 26.8 284 25-352 4-335 (349)
143 2ecf_A Dipeptidyl peptidase IV 99.9 2E-23 6.9E-28 198.3 23.2 288 23-343 111-460 (741)
144 2z3z_A Dipeptidyl aminopeptida 99.9 7.7E-23 2.6E-27 193.3 26.6 294 9-344 16-393 (706)
145 1pby_B Quinohemoprotein amine 99.9 8.2E-23 2.8E-27 175.4 21.3 263 5-309 16-320 (337)
146 1k32_A Tricorn protease; prote 99.9 2.3E-22 7.8E-27 197.4 27.1 288 19-344 294-639 (1045)
147 1xfd_A DIP, dipeptidyl aminope 99.9 2.9E-22 1E-26 189.8 26.9 317 5-346 42-447 (723)
148 1k32_A Tricorn protease; prote 99.9 3.3E-22 1.1E-26 196.3 25.2 296 12-344 195-504 (1045)
149 2ojh_A Uncharacterized protein 99.9 3.1E-22 1.1E-26 168.4 21.7 216 5-240 27-261 (297)
150 3o4h_A Acylamino-acid-releasin 99.9 6E-22 2E-26 182.8 24.2 282 14-342 14-315 (582)
151 3scy_A Hypothetical bacterial 99.9 9.1E-21 3.1E-25 164.3 28.3 286 34-348 14-345 (361)
152 3hfq_A Uncharacterized protein 99.9 6E-21 2E-25 164.6 26.5 269 16-303 35-323 (347)
153 3pe7_A Oligogalacturonate lyas 99.9 3.6E-21 1.2E-25 168.6 24.7 302 8-341 18-381 (388)
154 3vgz_A Uncharacterized protein 99.9 5.9E-21 2E-25 164.9 25.5 260 63-355 39-316 (353)
155 1z68_A Fibroblast activation p 99.9 3.8E-21 1.3E-25 182.0 20.9 286 24-342 19-391 (719)
156 3scy_A Hypothetical bacterial 99.9 2.4E-19 8.4E-24 155.3 30.3 276 19-317 48-357 (361)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 4.4E-21 1.5E-25 169.5 19.5 207 19-239 35-280 (434)
158 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.5E-20 1.5E-24 160.0 24.6 285 35-343 4-342 (365)
159 1z68_A Fibroblast activation p 99.9 2E-20 6.7E-25 177.2 24.0 316 5-348 41-449 (719)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-20 6.3E-25 165.5 20.0 206 18-236 90-332 (434)
161 1jmx_B Amine dehydrogenase; ox 99.8 4E-19 1.4E-23 153.1 23.4 258 5-309 26-335 (349)
162 3c5m_A Oligogalacturonate lyas 99.8 6.8E-20 2.3E-24 160.9 18.0 306 7-344 17-386 (396)
163 4a5s_A Dipeptidyl peptidase 4 99.8 1E-18 3.4E-23 165.6 26.9 276 20-329 16-379 (740)
164 3o4h_A Acylamino-acid-releasin 99.8 1E-19 3.5E-24 168.0 17.7 238 63-347 20-279 (582)
165 3fvz_A Peptidyl-glycine alpha- 99.8 2.6E-17 8.8E-22 140.5 29.9 261 20-342 23-322 (329)
166 3azo_A Aminopeptidase; POP fam 99.8 2.8E-18 9.4E-23 160.9 25.3 306 8-346 11-373 (662)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.5E-18 8.4E-23 149.1 22.0 257 19-300 38-342 (365)
168 2oiz_A Aromatic amine dehydrog 99.8 5.2E-18 1.8E-22 146.3 23.6 282 41-349 29-343 (361)
169 4a5s_A Dipeptidyl peptidase 4 99.8 4.3E-18 1.5E-22 161.2 24.1 317 5-348 41-455 (740)
170 1q7f_A NHL, brain tumor CG1071 99.8 2.5E-16 8.5E-21 131.7 28.8 249 17-301 26-282 (286)
171 3azo_A Aminopeptidase; POP fam 99.8 1.1E-16 3.6E-21 150.2 26.0 212 12-239 59-327 (662)
172 2oiz_A Aromatic amine dehydrog 99.8 6E-17 2.1E-21 139.7 21.6 279 5-325 36-360 (361)
173 3pe7_A Oligogalacturonate lyas 99.8 1E-16 3.5E-21 140.2 21.9 264 47-345 14-332 (388)
174 2dg1_A DRP35, lactonase; beta 99.8 1.6E-16 5.6E-21 135.9 22.4 277 20-331 5-298 (333)
175 1q7f_A NHL, brain tumor CG1071 99.8 6.3E-16 2.2E-20 129.2 25.4 251 62-344 27-282 (286)
176 2z2n_A Virginiamycin B lyase; 99.8 1.5E-14 5.1E-19 121.6 33.6 288 15-344 9-297 (299)
177 3e5z_A Putative gluconolactona 99.8 1.6E-15 5.5E-20 127.4 27.3 210 8-236 15-245 (296)
178 1qks_A Cytochrome CD1 nitrite 99.7 5.4E-15 1.8E-19 133.9 29.9 280 34-343 168-478 (567)
179 2xdw_A Prolyl endopeptidase; a 99.7 2.5E-15 8.4E-20 141.8 28.3 203 18-233 122-362 (710)
180 3dsm_A Uncharacterized protein 99.7 1.7E-15 5.8E-20 129.0 23.3 269 41-351 15-310 (328)
181 1qks_A Cytochrome CD1 nitrite 99.7 5.7E-14 1.9E-18 127.3 34.4 324 8-351 185-547 (567)
182 3c5m_A Oligogalacturonate lyas 99.7 5.7E-16 1.9E-20 135.8 16.7 197 23-240 83-332 (396)
183 2bkl_A Prolyl endopeptidase; m 99.7 9.8E-15 3.4E-19 137.3 25.5 285 28-345 75-400 (695)
184 2gop_A Trilobed protease; beta 99.7 8.7E-15 3E-19 125.9 23.3 258 21-341 15-330 (347)
185 2qc5_A Streptogramin B lactona 99.7 6.5E-13 2.2E-17 111.6 33.7 282 17-340 16-298 (300)
186 1rwi_B Serine/threonine-protei 99.7 7.2E-14 2.5E-18 115.6 26.6 242 22-302 25-267 (270)
187 2dg1_A DRP35, lactonase; beta 99.7 3.4E-13 1.1E-17 115.3 31.3 209 13-236 37-262 (333)
188 2bkl_A Prolyl endopeptidase; m 99.7 2E-14 6.7E-19 135.3 25.7 253 18-302 118-400 (695)
189 3dsm_A Uncharacterized protein 99.7 7.2E-14 2.5E-18 118.9 26.6 250 21-307 44-309 (328)
190 3no2_A Uncharacterized protein 99.7 2.3E-14 8E-19 118.4 22.5 188 34-240 6-198 (276)
191 2mad_H Methylamine dehydrogena 99.7 3.5E-13 1.2E-17 116.3 29.0 294 27-349 27-357 (373)
192 1rwi_B Serine/threonine-protei 99.6 9E-14 3.1E-18 115.0 24.0 242 66-346 25-268 (270)
193 3sjl_D Methylamine dehydrogena 99.6 1.2E-13 4E-18 117.6 24.2 304 26-353 38-374 (386)
194 3fvz_A Peptidyl-glycine alpha- 99.6 3.1E-13 1E-17 115.2 26.0 215 18-237 88-322 (329)
195 3c75_H MADH, methylamine dehyd 99.6 1.7E-13 6E-18 118.7 21.8 293 30-349 82-409 (426)
196 2gop_A Trilobed protease; beta 99.6 2.8E-13 9.7E-18 116.4 23.2 185 21-239 59-293 (347)
197 1yr2_A Prolyl oligopeptidase; 99.6 1.7E-13 5.8E-18 129.8 22.5 280 29-344 115-443 (741)
198 2z2n_A Virginiamycin B lyase; 99.6 1.4E-11 4.9E-16 103.3 29.7 244 62-344 12-256 (299)
199 2xdw_A Prolyl endopeptidase; a 99.6 2.4E-12 8.1E-17 121.5 26.7 193 30-237 81-320 (710)
200 3hrp_A Uncharacterized protein 99.6 4E-12 1.4E-16 111.2 25.8 206 21-240 131-357 (409)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.4E-12 2.5E-16 105.9 26.9 211 15-239 12-258 (314)
202 1yr2_A Prolyl oligopeptidase; 99.6 3E-12 1E-16 121.3 26.9 252 19-301 161-443 (741)
203 1xip_A Nucleoporin NUP159; bet 99.5 2.2E-13 7.4E-18 116.5 16.1 176 22-225 39-232 (388)
204 3e5z_A Putative gluconolactona 99.5 2.5E-12 8.6E-17 107.9 21.9 206 13-240 61-289 (296)
205 3no2_A Uncharacterized protein 99.5 2E-11 6.8E-16 100.8 23.2 206 5-225 20-231 (276)
206 2mad_H Methylamine dehydrogena 99.5 7.6E-11 2.6E-15 101.7 27.4 258 8-306 55-357 (373)
207 3sjl_D Methylamine dehydrogena 99.4 2.7E-11 9.4E-16 103.1 22.0 266 8-309 67-373 (386)
208 3hrp_A Uncharacterized protein 99.4 3.8E-11 1.3E-15 105.0 23.4 247 65-340 131-408 (409)
209 1yiq_A Quinohemoprotein alcoho 99.4 2.6E-11 8.9E-16 113.1 23.4 302 35-352 72-515 (689)
210 2qc5_A Streptogramin B lactona 99.4 7.3E-10 2.5E-14 92.8 30.2 199 19-235 60-258 (300)
211 2qe8_A Uncharacterized protein 99.4 2.5E-11 8.7E-16 103.9 20.8 279 21-339 17-318 (343)
212 3iuj_A Prolyl endopeptidase; h 99.4 4.6E-11 1.6E-15 112.2 23.6 209 18-239 126-361 (693)
213 3dr2_A Exported gluconolactona 99.4 9.8E-11 3.4E-15 98.5 23.3 235 63-339 43-303 (305)
214 1kb0_A Quinohemoprotein alcoho 99.4 8.9E-11 3E-15 109.3 23.9 304 35-353 79-518 (677)
215 3g4e_A Regucalcin; six bladed 99.4 1.5E-10 5.1E-15 97.0 23.0 234 63-330 11-259 (297)
216 1mda_H Methylamine dehydrogena 99.4 2.2E-11 7.4E-16 103.9 17.6 286 34-353 33-357 (368)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.3E-10 1.1E-14 95.7 23.9 201 19-237 69-299 (314)
218 3c75_H MADH, methylamine dehyd 99.4 7.8E-11 2.7E-15 102.2 19.3 260 8-306 107-409 (426)
219 2ghs_A AGR_C_1268P; regucalcin 99.3 3.9E-09 1.3E-13 89.5 29.3 196 22-235 50-258 (326)
220 3g4e_A Regucalcin; six bladed 99.3 1.7E-09 5.9E-14 90.5 26.7 209 16-241 8-233 (297)
221 1xip_A Nucleoporin NUP159; bet 99.3 2.5E-11 8.6E-16 103.8 15.5 153 66-240 39-194 (388)
222 1yiq_A Quinohemoprotein alcoho 99.3 2.1E-10 7.1E-15 107.1 22.8 271 35-329 123-534 (689)
223 3dr2_A Exported gluconolactona 99.3 7.2E-10 2.5E-14 93.2 23.1 206 12-236 36-266 (305)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.5E-09 5.3E-14 94.1 24.7 269 35-351 55-346 (376)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.3 5.1E-09 1.7E-13 90.9 27.9 265 35-339 105-375 (376)
226 1kb0_A Quinohemoprotein alcoho 99.3 7.2E-10 2.5E-14 103.2 23.8 269 35-329 130-536 (677)
227 3iuj_A Prolyl endopeptidase; h 99.3 4.1E-10 1.4E-14 105.7 21.8 249 62-345 126-408 (693)
228 1kv9_A Type II quinohemoprotei 99.2 5.4E-09 1.8E-13 97.3 26.4 306 35-353 68-499 (668)
229 2ece_A 462AA long hypothetical 99.2 1.7E-09 5.7E-14 92.9 20.1 241 74-331 93-399 (462)
230 1fwx_A Nitrous oxide reductase 99.2 6.1E-09 2.1E-13 92.6 21.9 281 35-344 17-433 (595)
231 2iwa_A Glutamine cyclotransfer 99.2 2.3E-08 7.9E-13 80.6 23.1 211 10-238 9-238 (266)
232 2ghs_A AGR_C_1268P; regucalcin 99.2 4.3E-08 1.5E-12 83.1 25.4 188 20-227 89-292 (326)
233 2hz6_A Endoplasmic reticulum t 99.2 9.2E-12 3.1E-16 107.5 2.6 183 34-241 10-196 (369)
234 2ece_A 462AA long hypothetical 99.1 2.5E-08 8.6E-13 85.7 23.3 198 30-237 93-352 (462)
235 2qe8_A Uncharacterized protein 99.1 4E-09 1.4E-13 90.2 18.5 211 18-231 64-315 (343)
236 1fwx_A Nitrous oxide reductase 99.1 9.4E-09 3.2E-13 91.5 20.2 193 30-237 99-361 (595)
237 1mda_H Methylamine dehydrogena 99.1 3.1E-09 1.1E-13 90.7 15.8 257 7-309 53-356 (368)
238 3hxj_A Pyrrolo-quinoline quino 99.1 2.1E-08 7.2E-13 85.2 20.3 268 19-343 58-325 (330)
239 1npe_A Nidogen, entactin; glyc 99.1 5E-07 1.7E-11 74.1 27.6 251 36-325 4-263 (267)
240 2hz6_A Endoplasmic reticulum t 99.1 6.1E-11 2.1E-15 102.4 4.0 143 77-240 9-152 (369)
241 3nol_A Glutamine cyclotransfer 99.0 4.6E-08 1.6E-12 77.9 19.3 187 19-226 39-244 (262)
242 3qqz_A Putative uncharacterize 99.0 5.7E-07 1.9E-11 72.1 25.8 214 15-235 21-251 (255)
243 1npe_A Nidogen, entactin; glyc 99.0 7.2E-07 2.5E-11 73.2 26.7 202 21-241 36-242 (267)
244 3hxj_A Pyrrolo-quinoline quino 99.0 9.3E-09 3.2E-13 87.4 15.4 270 24-351 23-292 (330)
245 2ad6_A Methanol dehydrogenase 99.0 1.1E-07 3.7E-12 86.8 21.9 268 35-329 117-523 (571)
246 3nok_A Glutaminyl cyclase; bet 99.0 1.4E-07 4.8E-12 75.1 19.3 183 23-225 57-253 (268)
247 2ad6_A Methanol dehydrogenase 99.0 3.5E-07 1.2E-11 83.4 24.4 304 35-353 64-505 (571)
248 1kv9_A Type II quinohemoprotei 98.9 1.1E-07 3.8E-12 88.5 21.1 269 35-329 119-518 (668)
249 1w6s_A Methanol dehydrogenase 98.9 4.2E-07 1.4E-11 82.9 23.8 305 35-353 64-514 (599)
250 1flg_A Protein (quinoprotein e 98.9 1.9E-06 6.3E-11 78.8 27.9 307 36-354 71-528 (582)
251 3mbr_X Glutamine cyclotransfer 98.9 3.8E-07 1.3E-11 72.0 20.2 194 13-226 12-223 (243)
252 2fp8_A Strictosidine synthase; 98.9 4.2E-06 1.4E-10 70.7 27.3 194 16-224 14-246 (322)
253 2iwa_A Glutamine cyclotransfer 98.9 3.8E-07 1.3E-11 73.5 19.0 206 66-300 22-238 (266)
254 3nol_A Glutamine cyclotransfer 98.9 4.1E-07 1.4E-11 72.5 18.1 156 65-240 43-204 (262)
255 1w6s_A Methanol dehydrogenase 98.8 1E-06 3.4E-11 80.4 22.6 263 36-329 124-533 (599)
256 1flg_A Protein (quinoprotein e 98.8 2.1E-06 7.3E-11 78.3 23.7 271 35-329 119-545 (582)
257 2p4o_A Hypothetical protein; p 98.8 1.7E-05 5.7E-10 66.5 27.4 207 12-236 24-241 (306)
258 4a2l_A BT_4663, two-component 98.8 4.1E-05 1.4E-09 73.2 33.4 296 20-345 214-529 (795)
259 1k3i_A Galactose oxidase precu 98.8 1.3E-06 4.4E-11 81.5 21.6 115 25-149 190-325 (656)
260 3v64_C Agrin; beta propeller, 98.8 6.2E-05 2.1E-09 64.1 31.4 200 19-237 32-234 (349)
261 4a2l_A BT_4663, two-component 98.8 6.3E-05 2.2E-09 71.9 33.2 296 20-344 309-616 (795)
262 3v65_B Low-density lipoprotein 98.7 5E-05 1.7E-09 65.7 28.6 263 22-325 78-343 (386)
263 1ijq_A LDL receptor, low-densi 98.7 5.5E-05 1.9E-09 63.5 27.4 207 20-240 29-241 (316)
264 3nok_A Glutaminyl cyclase; bet 98.7 6.9E-06 2.4E-10 65.4 19.9 156 65-240 55-213 (268)
265 4hw6_A Hypothetical protein, I 98.7 1.9E-05 6.5E-10 69.4 24.5 157 66-236 140-303 (433)
266 3v64_C Agrin; beta propeller, 98.6 9.1E-05 3.1E-09 63.1 27.3 204 21-240 73-278 (349)
267 3v65_B Low-density lipoprotein 98.6 4.6E-05 1.6E-09 66.0 25.6 204 21-240 116-321 (386)
268 2xe4_A Oligopeptidase B; hydro 98.6 8.1E-06 2.8E-10 77.3 22.5 197 22-235 175-398 (751)
269 3p5b_L Low density lipoprotein 98.6 0.00013 4.6E-09 63.3 28.2 209 19-240 110-323 (400)
270 3qqz_A Putative uncharacterize 98.6 6.4E-05 2.2E-09 60.3 23.9 166 61-236 23-203 (255)
271 3v9f_A Two-component system se 98.6 0.00014 4.8E-09 69.4 30.3 295 20-344 257-570 (781)
272 3tc9_A Hypothetical hydrolase; 98.6 3.7E-05 1.3E-09 67.5 23.8 157 66-237 138-301 (430)
273 2p4o_A Hypothetical protein; p 98.6 0.00023 7.9E-09 59.4 27.8 228 65-331 32-276 (306)
274 3kya_A Putative phosphatase; s 98.5 8.9E-05 3E-09 65.4 25.0 161 67-236 141-340 (496)
275 2fp8_A Strictosidine synthase; 98.5 4.2E-05 1.4E-09 64.5 22.4 199 21-237 80-313 (322)
276 3v9f_A Two-component system se 98.5 0.00062 2.1E-08 65.0 32.9 292 21-344 211-526 (781)
277 2xe4_A Oligopeptidase B; hydro 98.5 0.00011 3.8E-09 69.6 27.2 158 66-237 175-354 (751)
278 3mbr_X Glutamine cyclotransfer 98.5 0.00014 4.9E-09 57.4 22.7 158 64-240 20-182 (243)
279 4hw6_A Hypothetical protein, I 98.4 0.00013 4.4E-09 64.1 23.8 200 21-235 139-372 (433)
280 3sov_A LRP-6, low-density lipo 98.4 0.00022 7.4E-09 59.8 23.8 204 22-240 36-241 (318)
281 3p5b_L Low density lipoprotein 98.4 0.00079 2.7E-08 58.5 29.7 180 42-237 91-277 (400)
282 3sov_A LRP-6, low-density lipo 98.4 0.00055 1.9E-08 57.4 25.5 247 42-323 12-261 (318)
283 3m0c_C LDL receptor, low-densi 98.4 0.00052 1.8E-08 64.8 27.4 209 19-240 422-635 (791)
284 2p9w_A MAL S 1 allergenic prot 98.4 0.00022 7.6E-09 58.9 21.7 217 16-236 8-264 (334)
285 3tc9_A Hypothetical hydrolase; 98.3 0.00029 1E-08 61.8 23.6 153 22-192 138-300 (430)
286 1ijq_A LDL receptor, low-densi 98.3 0.00088 3E-08 56.1 29.5 180 43-237 10-195 (316)
287 1n7d_A LDL receptor, low-densi 98.3 7.1E-06 2.4E-10 76.7 13.2 206 21-241 406-618 (699)
288 1k3i_A Galactose oxidase precu 98.2 6.9E-05 2.4E-09 69.9 18.5 210 23-240 245-500 (656)
289 3amr_A 3-phytase; beta-propell 98.2 0.0007 2.4E-08 56.5 22.0 204 25-236 30-262 (355)
290 3m0c_C LDL receptor, low-densi 98.2 0.0038 1.3E-07 59.0 29.9 198 22-238 386-590 (791)
291 3kya_A Putative phosphatase; s 98.2 0.0014 4.7E-08 57.9 24.6 205 22-239 140-411 (496)
292 1n7d_A LDL receptor, low-densi 98.2 6.6E-05 2.3E-09 70.2 16.4 231 42-308 385-623 (699)
293 3s94_A LRP-6, low-density lipo 98.1 0.0048 1.7E-07 56.8 30.9 206 20-240 39-246 (619)
294 4a0p_A LRP6, LRP-6, low-densit 98.1 0.006 2.1E-07 56.2 27.1 201 21-239 37-239 (628)
295 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0076 2.6E-07 55.5 28.8 183 41-238 13-198 (628)
296 3ei3_A DNA damage-binding prot 98.0 0.013 4.5E-07 57.9 29.7 190 20-225 553-755 (1158)
297 2p9w_A MAL S 1 allergenic prot 98.0 0.00087 3E-08 55.4 17.6 170 63-236 11-214 (334)
298 2xzh_A Clathrin heavy chain 1; 97.9 0.0054 1.8E-07 50.3 23.8 267 43-344 49-334 (365)
299 2xbg_A YCF48-like protein; pho 97.9 0.0075 2.6E-07 50.7 23.9 196 20-234 121-319 (327)
300 3sre_A PON1, serum paraoxonase 97.8 0.011 3.9E-07 49.9 21.7 202 12-227 41-287 (355)
301 3amr_A 3-phytase; beta-propell 97.7 0.012 4.2E-07 49.1 20.0 147 77-236 40-209 (355)
302 3s94_A LRP-6, low-density lipo 97.5 0.052 1.8E-06 50.0 23.8 201 21-238 349-552 (619)
303 2ism_A Putative oxidoreductase 97.4 0.042 1.4E-06 46.7 25.2 216 13-238 23-298 (352)
304 1bpo_A Protein (clathrin); cla 97.4 0.048 1.6E-06 46.8 24.5 267 43-345 48-334 (494)
305 3pbp_A Nucleoporin NUP82; beta 97.3 0.068 2.3E-06 45.8 21.1 149 77-233 32-208 (452)
306 2xbg_A YCF48-like protein; pho 97.3 0.061 2.1E-06 45.1 32.2 279 20-340 35-320 (327)
307 1tl2_A L10, protein (tachylect 97.3 0.039 1.3E-06 42.6 16.3 187 34-235 5-206 (236)
308 3ei3_A DNA damage-binding prot 97.3 0.033 1.1E-06 55.1 20.1 193 28-235 839-1060(1158)
309 2xzh_A Clathrin heavy chain 1; 97.2 0.069 2.4E-06 44.0 25.2 230 86-354 48-302 (365)
310 2vpj_A Kelch-like protein 12; 97.1 0.083 2.8E-06 43.6 19.4 231 77-344 15-280 (301)
311 3a9g_A Putative uncharacterize 97.1 0.11 3.9E-06 44.0 22.3 150 65-224 29-215 (354)
312 1tl2_A L10, protein (tachylect 97.0 0.043 1.5E-06 42.4 14.5 152 21-186 41-203 (236)
313 2xn4_A Kelch-like protein 2; s 97.0 0.079 2.7E-06 43.8 17.5 188 34-239 17-231 (302)
314 4asc_A Kelch repeat and BTB do 96.9 0.11 3.9E-06 43.1 17.5 188 34-239 6-223 (315)
315 3ii7_A Kelch-like protein 7; p 96.8 0.1 3.5E-06 43.1 17.0 188 34-239 13-227 (306)
316 2vpj_A Kelch-like protein 12; 96.8 0.068 2.3E-06 44.1 15.8 188 34-239 64-280 (301)
317 2g8s_A Glucose/sorbosone dehyd 96.8 0.19 6.6E-06 42.6 25.1 168 7-179 4-214 (353)
318 3ii7_A Kelch-like protein 7; p 96.8 0.095 3.2E-06 43.4 16.5 188 34-239 57-274 (306)
319 2xn4_A Kelch-like protein 2; s 96.8 0.085 2.9E-06 43.6 16.1 189 34-239 63-278 (302)
320 3pbp_A Nucleoporin NUP82; beta 96.7 0.24 8.2E-06 42.5 20.4 142 42-189 40-208 (452)
321 3a9g_A Putative uncharacterize 96.6 0.26 8.9E-06 41.8 22.3 159 12-180 20-215 (354)
322 1xi4_A Clathrin heavy chain; a 96.6 0.38 1.3E-05 48.1 20.7 231 43-307 48-297 (1630)
323 1zgk_A Kelch-like ECH-associat 96.6 0.21 7E-06 41.4 17.2 189 34-240 26-243 (308)
324 3sre_A PON1, serum paraoxonase 96.5 0.23 7.7E-06 42.0 16.6 163 66-237 51-252 (355)
325 1cru_A Protein (soluble quinop 96.5 0.42 1.4E-05 42.1 20.0 122 7-135 13-162 (454)
326 2be1_A Serine/threonine-protei 96.3 0.0091 3.1E-07 50.0 6.7 198 35-240 12-234 (339)
327 3das_A Putative oxidoreductase 96.2 0.45 1.5E-05 40.0 22.9 155 64-224 31-219 (347)
328 2ism_A Putative oxidoreductase 96.2 0.48 1.6E-05 40.1 20.4 195 20-225 74-333 (352)
329 4asc_A Kelch repeat and BTB do 96.2 0.43 1.5E-05 39.5 16.7 192 30-239 44-279 (315)
330 1zgk_A Kelch-like ECH-associat 96.1 0.18 6.3E-06 41.7 14.2 188 34-239 72-289 (308)
331 2g8s_A Glucose/sorbosone dehyd 96.0 0.62 2.1E-05 39.5 23.8 153 65-223 18-214 (353)
332 1cru_A Protein (soluble quinop 96.0 0.65 2.2E-05 40.9 17.4 115 65-182 27-163 (454)
333 1xi4_A Clathrin heavy chain; a 95.9 0.71 2.4E-05 46.3 18.5 201 26-242 71-294 (1630)
334 3sbq_A Nitrous-oxide reductase 95.9 0.88 3E-05 40.6 22.1 239 35-300 72-409 (638)
335 2zwa_A Leucine carboxyl methyl 95.6 0.69 2.3E-05 43.3 17.0 197 34-239 399-637 (695)
336 2woz_A Kelch repeat and BTB do 95.6 0.81 2.8E-05 37.9 17.6 148 77-239 110-289 (318)
337 2uvk_A YJHT; unknown function, 95.5 0.41 1.4E-05 40.5 14.2 54 185-241 286-346 (357)
338 2uvk_A YJHT; unknown function, 95.5 0.64 2.2E-05 39.3 15.3 65 34-100 21-99 (357)
339 2woz_A Kelch repeat and BTB do 95.4 0.94 3.2E-05 37.5 21.4 145 34-194 17-185 (318)
340 1bpo_A Protein (clathrin); cla 94.8 1.8 6.1E-05 37.5 28.4 201 25-241 70-293 (494)
341 3ott_A Two-component system se 94.5 3.4 0.00012 39.1 28.1 198 20-240 21-223 (758)
342 2be1_A Serine/threonine-protei 93.3 0.26 9E-06 41.2 7.5 118 219-352 11-140 (339)
343 2zwa_A Leucine carboxyl methyl 93.1 2.6 9E-05 39.4 14.7 156 31-194 451-636 (695)
344 3ott_A Two-component system se 92.5 7.2 0.00025 36.9 30.0 201 22-240 192-404 (758)
345 3das_A Putative oxidoreductase 92.1 4.8 0.00016 33.8 28.0 216 13-238 24-293 (347)
346 3sbq_A Nitrous-oxide reductase 90.9 3.2 0.00011 37.2 11.4 75 21-96 323-408 (638)
347 2wg3_C Hedgehog-interacting pr 90.4 6.5 0.00022 34.6 13.3 108 119-226 16-158 (463)
348 3q6k_A 43.2 kDa salivary prote 90.3 7.8 0.00027 32.9 15.5 146 88-237 124-306 (381)
349 2wg3_C Hedgehog-interacting pr 88.5 12 0.0004 33.0 13.4 112 20-137 13-159 (463)
350 4gq2_M Nucleoporin NUP120; bet 87.8 17 0.00057 35.5 15.2 40 66-106 237-276 (950)
351 4gq2_M Nucleoporin NUP120; bet 86.8 11 0.00037 36.8 13.3 36 207-242 236-271 (950)
352 3q6k_A 43.2 kDa salivary prote 86.3 15 0.0005 31.3 22.1 174 20-193 86-306 (381)
353 3s25_A Hypothetical 7-bladed b 83.5 17 0.00058 29.7 16.7 175 26-236 58-254 (302)
354 3s25_A Hypothetical 7-bladed b 82.6 19 0.00063 29.5 21.7 173 30-238 23-217 (302)
355 4hvt_A Ritya.17583.B, post-pro 76.1 52 0.0018 30.8 21.3 36 66-101 130-170 (711)
356 3b7f_A Glycosyl hydrolase, BNR 75.8 36 0.0012 28.9 22.1 156 66-225 116-297 (394)
357 1sqj_A OXG-RCBH, oligoxylogluc 74.7 60 0.002 30.9 22.5 161 20-183 14-190 (789)
358 3f7f_A Nucleoporin NUP120; nuc 74.5 19 0.00064 33.5 9.4 38 66-106 223-260 (729)
359 3f7f_A Nucleoporin NUP120; nuc 74.2 11 0.00037 35.1 7.8 81 208-299 223-305 (729)
360 3qhy_B Beta-lactamase inhibito 73.9 33 0.0011 27.6 20.6 182 22-237 64-246 (282)
361 3no0_A DNA gyrase subunit A; D 73.6 34 0.0012 27.5 24.8 211 13-237 13-246 (276)
362 3l6v_A GYRA, DNA gyrase subuni 73.0 42 0.0014 28.4 26.9 155 73-237 4-180 (370)
363 4fhn_B Nucleoporin NUP120; pro 70.9 20 0.00067 35.9 9.6 40 66-106 239-278 (1139)
364 4hvt_A Ritya.17583.B, post-pro 70.2 72 0.0025 29.9 19.4 202 23-239 131-383 (711)
365 3uc1_A DNA gyrase subunit A; D 68.2 50 0.0017 27.3 23.3 162 20-192 94-278 (327)
366 3b7f_A Glycosyl hydrolase, BNR 66.0 61 0.0021 27.5 22.1 188 35-228 24-254 (394)
367 1sqj_A OXG-RCBH, oligoxylogluc 65.9 93 0.0032 29.6 15.5 160 63-227 13-190 (789)
368 1suu_A DNA gyrase subunit A; t 60.0 71 0.0024 26.2 24.9 197 30-238 6-232 (312)
369 3kci_A Probable E3 ubiquitin-p 59.2 82 0.0028 26.7 25.9 163 66-237 54-241 (389)
370 3zwu_A Alkaline phosphatase PH 56.4 47 0.0016 30.3 8.3 59 23-83 478-548 (592)
371 4fhn_B Nucleoporin NUP120; pro 56.0 13 0.00044 37.2 5.1 37 313-350 239-276 (1139)
372 3qhy_B Beta-lactamase inhibito 54.6 82 0.0028 25.3 25.5 144 65-237 24-168 (282)
373 3zwu_A Alkaline phosphatase PH 50.6 64 0.0022 29.4 8.2 59 67-134 478-548 (592)
374 4a9v_A PHOX; hydrolase, beta-p 50.1 92 0.0032 28.2 8.9 61 21-83 476-548 (592)
375 2cn3_A Xyloglucanase, beta-1,4 49.5 1.7E+02 0.0059 27.5 22.9 115 21-136 23-152 (737)
376 2cn3_A Xyloglucanase, beta-1,4 47.7 1.8E+02 0.0063 27.3 16.0 115 66-183 24-153 (737)
377 3no0_A DNA gyrase subunit A; D 44.6 1.2E+02 0.0041 24.3 20.2 161 20-192 67-245 (276)
378 3a0f_A Xyloglucanase; beta-pro 42.8 2.2E+02 0.0076 26.9 23.7 163 19-184 19-203 (763)
379 3kci_A Probable E3 ubiquitin-p 42.5 1.6E+02 0.0053 25.0 22.8 193 36-237 65-293 (389)
380 4a9v_A PHOX; hydrolase, beta-p 42.3 1.4E+02 0.0049 27.0 8.9 62 65-135 476-549 (592)
381 1suu_A DNA gyrase subunit A; t 41.4 1.5E+02 0.005 24.3 26.8 154 74-237 6-181 (312)
382 1zi0_A DNA gyrase subunit A; b 39.2 1.6E+02 0.0053 24.1 25.9 152 77-237 3-176 (307)
383 1q47_A Semaphorin 3A; beta pro 38.6 1.1E+02 0.0036 27.2 7.6 69 164-232 406-487 (495)
384 1zvt_A Topoisomerase IV subuni 38.0 1.5E+02 0.0051 23.4 17.4 149 78-237 3-163 (256)
385 1wp5_A Topoisomerase IV; broke 36.3 1.8E+02 0.0062 23.9 24.2 154 74-237 3-174 (323)
386 2z5e_A Proteasome assembling c 32.3 50 0.0017 22.6 3.6 44 1-47 1-44 (122)
387 1wp5_A Topoisomerase IV; broke 31.6 2.2E+02 0.0074 23.4 23.3 195 30-237 3-225 (323)
388 4gz8_A Semaphorin-3A; multi-do 30.5 1.1E+02 0.0039 28.3 6.7 58 175-232 430-495 (667)
389 3a0f_A Xyloglucanase; beta-pro 29.7 3.6E+02 0.012 25.4 18.0 165 62-228 18-203 (763)
390 3uc1_A DNA gyrase subunit A; D 27.6 2.6E+02 0.0089 23.0 28.9 165 64-237 94-279 (327)
391 1zi0_A DNA gyrase subunit A; b 26.7 2.6E+02 0.0088 22.7 27.0 193 34-237 4-226 (307)
392 1q47_A Semaphorin 3A; beta pro 26.6 1.7E+02 0.006 25.9 7.0 59 129-188 422-487 (495)
393 1olz_A Semaphorin 4D; developm 26.6 1.5E+02 0.0053 27.4 6.9 59 129-188 416-477 (663)
394 3nvq_A Semaphorin-7A; beta-pro 26.0 1.7E+02 0.0057 26.7 6.7 58 175-232 381-444 (590)
395 3ol2_B Plexin-B1; beta-propell 22.4 2.1E+02 0.0072 25.6 6.6 69 163-232 388-461 (528)
396 1xks_A Nuclear pore complex pr 20.2 4.3E+02 0.015 23.0 19.8 158 71-238 44-238 (450)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4e-48 Score=341.70 Aligned_cols=292 Identities=19% Similarity=0.299 Sum_probs=249.2
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG 87 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 87 (396)
+.......+.+|.++|++++|+|++ .+|++|+.||+|+|||+.++.....+ .+|...|.+++|+|+ +.+|++|+.|+
T Consensus 96 ~~~~~~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~~~~l-~~h~~~V~~v~~~~~-~~~l~sgs~D~ 172 (410)
T 1vyh_C 96 PRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTL-KGHTDSVQDISFDHS-GKLLASCSADM 172 (410)
T ss_dssp CCSSCSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCCCEEE-CCCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred cCCCceEeecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEE-eccCCcEEEEEEcCC-CCEEEEEeCCC
Confidence 4445567899999999999999998 68999999999999999998877777 789999999999999 89999999999
Q ss_pred eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEE
Q 016032 88 TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGL 167 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 167 (396)
+|++||+.+++.+..+..+.. .|.+++|+|++.+|++|+.|+.|++||++++.... ....|...+.++
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~---------~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~---~~~~h~~~v~~~ 240 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDH---------NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK---TFTGHREWVRMV 240 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSS---------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE---EEECCSSCEEEE
T ss_pred eEEEEeCCCCceeEEEcCCCC---------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE---EEeCCCccEEEE
Confidence 999999999888776654433 39999999999999999999999999999876543 344566689999
Q ss_pred EeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCC--------------------CCEEEEEeCC
Q 016032 168 HCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS--------------------GSKILTTSQD 227 (396)
Q Consensus 168 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~d 227 (396)
.++| ++.+|++|+.|+.|++||+++.+....+ ..|...|.+++|+|+ +.+|++|+.|
T Consensus 241 ~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D 317 (410)
T 1vyh_C 241 RPNQ-DGTLIASCSNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317 (410)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT
T ss_pred EECC-CCCEEEEEcCCCeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC
Confidence 9999 9999999999999999999875543332 368899999999996 6789999999
Q ss_pred CcEEEEEcccccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 228 NRLRIWDSIFGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 228 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
+.|++||++++..... +.++.. ...+.|+|+ |++++ +|+.|+.|++||+.+++++..+
T Consensus 318 ~~i~iwd~~~~~~~~~---------~~~h~~~v~~v~~~~~---------g~~l~---s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 318 KTIKMWDVSTGMCLMT---------LVGHDNWVRGVLFHSG---------GKFIL---SCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp SEEEEEETTTTEEEEE---------EECCSSCEEEEEECSS---------SSCEE---EEETTTEEEEECCTTSCCCEEE
T ss_pred CeEEEEECCCCceEEE---------EECCCCcEEEEEEcCC---------CCEEE---EEeCCCeEEEEECCCCceEEEE
Confidence 9999999998775321 122222 246889987 77887 8999999999999999999988
Q ss_pred cCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcC
Q 016032 307 MDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRP 340 (396)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~ 340 (396)
.+|. ..+.++ +|+|++.+|++|+ |+.|+||++
T Consensus 377 ~~h~-~~v~~l-~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 377 NAHE-HFVTSL-DFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ECCS-SCEEEE-EECSSSSCEEEEETTSEEEEEC-
T ss_pred cCCC-CcEEEE-EEcCCCCEEEEEeCCCcEEEEeC
Confidence 8776 778888 8999999999999 999999986
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-47 Score=325.48 Aligned_cols=293 Identities=17% Similarity=0.255 Sum_probs=243.8
Q ss_pred ccceeeeccccCCeEEEEecCCC---CcEEEEEeCCCcEEEeecccceeee-EecCCcccceeEEEEecCCCcEEEEEeC
Q 016032 10 QVNCAVIRYHSRRVTCLEFHPTN---NHILLSGDKKGQVGVWDFYKVSEKI-VYGNIHSCIVNNIRFNPTNDGTVYAASS 85 (396)
Q Consensus 10 ~~~~~~~~~h~~~v~~~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 85 (396)
+...+.+++|.+.|++++|+|++ ..+|+||+.|++|+||++....... ....+|...|.+++|+|+ +.++++++.
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~-~~~l~s~s~ 100 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT-LPIAASSSL 100 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS-SSEEEEEET
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC-CCEEEEEeC
Confidence 34456778999999999999852 2589999999999999998765432 233789999999999999 899999999
Q ss_pred CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 86 DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 86 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
|++|++||+.+++.+..+..+... +.+++|+|++++|++++.+|.|++|+++.+.... ....+...+.
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~---------~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~---~~~~~~~~v~ 168 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVD---------AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY---SLDTRGKFIL 168 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTC---------CCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE---EEECSSSCEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCcc---------EEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE---EecCCCceEE
Confidence 999999999999888777654432 7889999999999999999999999999876432 3445556899
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
+++|+| ++.+|++|+.|+.|++||+++.+....+ .+|..+|.+++|+|++++|++|+.|+.|++||+++++...
T Consensus 169 ~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~--- 242 (321)
T 3ow8_A 169 SIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTL--EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG--- 242 (321)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE---
T ss_pred EEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEE--cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE---
Confidence 999999 9999999999999999999875443222 2688999999999999999999999999999998776532
Q ss_pred ceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCC
Q 016032 246 EIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRD 324 (396)
Q Consensus 246 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 324 (396)
.+..+.. ...++|+|+ |.+++ +++.|+.|++||+.+++++.++.+|. ..+.++ +|+|++
T Consensus 243 ------~~~~h~~~v~~~~~sp~---------~~~l~---s~s~D~~v~iwd~~~~~~~~~~~~h~-~~v~~v-~~s~~g 302 (321)
T 3ow8_A 243 ------TLSGHASWVLNVAFCPD---------DTHFV---SSSSDKSVKVWDVGTRTCVHTFFDHQ-DQVWGV-KYNGNG 302 (321)
T ss_dssp ------EECCCSSCEEEEEECTT---------SSEEE---EEETTSCEEEEETTTTEEEEEECCCS-SCEEEE-EECTTS
T ss_pred ------EEcCCCCceEEEEECCC---------CCEEE---EEeCCCcEEEEeCCCCEEEEEEcCCC-CcEEEE-EECCCC
Confidence 1222322 357899998 77777 78999999999999999999988776 788888 899999
Q ss_pred cEEEeec-CCcEEEEcCC
Q 016032 325 DVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 325 ~~l~sg~-d~~i~iw~~~ 341 (396)
++|++++ |+.|+|||..
T Consensus 303 ~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 SKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEEETTCCEEEEECC
T ss_pred CEEEEEeCCCeEEEEeCC
Confidence 9999999 9999999963
No 3
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=325.15 Aligned_cols=314 Identities=15% Similarity=0.197 Sum_probs=236.2
Q ss_pred cceeeeccccC-CeEEEEecCCCCcEEEEEeCCCcEEEeecccceee--eEecCCcccceeEEEEecCCCcEEEEEeCCC
Q 016032 11 VNCAVIRYHSR-RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK--IVYGNIHSCIVNNIRFNPTNDGTVYAASSDG 87 (396)
Q Consensus 11 ~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 87 (396)
.++..+.+|.+ .|++++|+|++ ++||+|+.|++|+|||+.+.... ..+..+|...|.+++|+|+ +.+|++++.|+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~-g~~l~s~s~D~ 83 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC-GNYLASASFDA 83 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC-CCEEEEEECCC
Confidence 46788999998 99999999999 68999999999999999876532 3334689999999999999 99999999999
Q ss_pred eEEEEECCCCcc--cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 88 TVSCTDLETGLA--LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 88 ~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
+|++|++.++.. +..+..+. ..|.+++|+|++++|++++.|+.|++||+..............|...|.
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~---------~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHE---------NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCS---------SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEE
T ss_pred cEEEEEccCCCeEEEEEccCCC---------CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeE
Confidence 999999987643 33443332 2399999999999999999999999999987654333334556677899
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
+++|+| ++.+|++++.|+.|++||++..+........+|...|.+++|+|++++|++++.|++|++||...........
T Consensus 155 ~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 155 HVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp EEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred EEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccce
Confidence 999999 9999999999999999998764322222233799999999999999999999999999999975433211110
Q ss_pred c--------eeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhh--------hhcCC
Q 016032 246 E--------IVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA--------EVMDP 309 (396)
Q Consensus 246 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~--------~~~~~ 309 (396)
. ...............++|+|. +.+++ +++.|+.|++|+...+.... .....
T Consensus 234 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~---------~~~l~---s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQL---------TGALA---TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp CC---CEEEEEEEECSSCSSCEEEEEECTT---------TCCEE---EEETTSCEEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred eeccCCccceeEEecCCCCCcEEEEEEecC---------CCEEE---EEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc
Confidence 0 000000011223457889987 55566 68899999999987653211 11123
Q ss_pred CCCCCcceeeeccCC-cEEEeec-CCcEEEEcCCCcceeeec
Q 016032 310 NITTISPVNKLHPRD-DVLASGS-SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 310 ~~~~i~~~~~~~~~~-~~l~sg~-d~~i~iw~~~~~~~~~~~ 349 (396)
|...|.++ +|+|++ .+||+|+ ||.|++|++.+++.+...
T Consensus 302 h~~~V~~v-~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 302 HSQDVNCV-AWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp SSSCEEEE-EECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred ccCcEeEe-EEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 44788888 899998 4999999 999999999988866544
No 4
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.1e-47 Score=339.09 Aligned_cols=320 Identities=27% Similarity=0.446 Sum_probs=242.6
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEe-cCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
.......+|...|+||+|+|.++.+||+|+.||.|+|||+.+......+ ..+|...|++|+|+|.++.+|++++.||+|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 3445677899999999999976679999999999999999876544433 367999999999999658899999999999
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEe
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC 169 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (396)
++||++++........+. ....+.+++|+|++.+|++|+.+|.|++||++.... .....|...|.+++|
T Consensus 190 ~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDT-------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVAL 258 (435)
T ss_dssp EEEETTSCEEEEEECCSS-------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEE
T ss_pred EEeeccCCceeEEeccCC-------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeee
Confidence 999998754433322211 112378899999999999999999999999975322 233456668999999
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
+|....+|++++.|+.|++||+++.+....+.. .+|...|++++|+|++.+|++++.||.|++||+.++...... ..
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~--~~ 336 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL--IP 336 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE--CC
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE--ec
Confidence 994456888999999999999987665444332 368999999999999999999999999999999987753211 11
Q ss_pred ecccccccCCceeEEeCCCCCCCceee--EeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcE
Q 016032 249 HSHDFNRHLTPFRAEWDPKDPSESLAV--IGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDV 326 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 326 (396)
+.........++...|+|......+.. .+.+++ ..+..++.|++||..+++.+..+..++...+.++.+|+|+|++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~ 414 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKS--CTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDT 414 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCC--SSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSC
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEE--EEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCE
Confidence 222333444556677887642221111 112221 1455667899999999999988887777888887679999999
Q ss_pred EEeecCCcEEEEcCCCcce
Q 016032 327 LASGSSRSIFIWRPKEKSE 345 (396)
Q Consensus 327 l~sg~d~~i~iw~~~~~~~ 345 (396)
|++|+|+.|+||++++++.
T Consensus 415 lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 415 LASAMGYHILIWSQQEART 433 (435)
T ss_dssp EEEECSSEEEECCCC----
T ss_pred EEEEcCCcEEEEECCcCee
Confidence 9999999999999998864
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.8e-47 Score=331.67 Aligned_cols=319 Identities=19% Similarity=0.250 Sum_probs=247.7
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
|...+..+.++|++|.+.|++++|+|++ ++|++|+.||+|+|||+.++.....+ ..|...|.+++|+|+ +.+|++|+
T Consensus 51 ~~~~~~~~~~~l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~~~~~-~~h~~~v~~~~~s~~-g~~las~~ 127 (380)
T 3iz6_a 51 FNPTDLVCCRTLQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQKTHAI-KLHCPWVMECAFAPN-GQSVACGG 127 (380)
T ss_dssp CCCCCCEEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEE-ECCCTTCCCCEECTT-SSEEEECC
T ss_pred cccceeEEeecccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCccceEE-ecCCCCEEEEEECCC-CCEEEEee
Confidence 5556667788999999999999999999 68999999999999999998877777 679999999999999 99999999
Q ss_pred CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCCccce--eeecCC
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRSGEAI--LIHRKG 161 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~~~~~--~~~~~~ 161 (396)
.|+.+++|++.+...............++. ..+.++.|.|+ +..|++|+.|+.|++||+.++....... ....|.
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~--~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGHK--GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCCS--SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred CCCcEEEEECCCCccccCCccceeeccCCC--cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 999999999976432110000001112222 23888899997 4679999999999999999876543211 113456
Q ss_pred ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 162 SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 162 ~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
..+.+++|++.++++|++|+.|+.|++||++.... .+.. .+|...|.+++|+|++.+|++|+.|++|++||+++++.
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR--AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC--CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc--ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE
Confidence 68999999886889999999999999999974322 2222 37999999999999999999999999999999998875
Q ss_pred cCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc---CCCCCCCcc
Q 016032 241 DSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM---DPNITTISP 316 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~---~~~~~~i~~ 316 (396)
....... ....... .....++|+|+ |++++ +|+.|+.|++||+.+++.+..+. ..+...|.+
T Consensus 284 ~~~~~~~--~~~~~~~~~~v~~~~~s~~---------g~~l~---~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 284 LQVYNRE--PDRNDNELPIVTSVAFSIS---------GRLLF---AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISC 349 (380)
T ss_dssp EEEECCC--CSSSCCSSCSCSEEEECSS---------SSEEE---EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCE
T ss_pred EEEeccc--ccccccccCceEEEEECCC---------CCEEE---EEECCCCEEEEECCCCceEEEEecccCCCCCceEE
Confidence 4321110 0000111 11347889998 88888 78999999999999888776552 334478888
Q ss_pred eeeeccCCcEEEeec-CCcEEEEcCCCcce
Q 016032 317 VNKLHPRDDVLASGS-SRSIFIWRPKEKSE 345 (396)
Q Consensus 317 ~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~ 345 (396)
+ +|+|+|.+|++|+ |+.|+||++...+.
T Consensus 350 l-~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 350 L-GLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp E-EECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred E-EECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 8 8999999999999 99999999987653
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-46 Score=317.38 Aligned_cols=294 Identities=18% Similarity=0.235 Sum_probs=243.8
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
..++|++|.+.|++++|+|++ .+|++|+.||.|+|||+.++.....+ ..|..+|.+++|+|+ +++|++|+.|++|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVEVRSI-QVTETPVRAGKFIAR-KNWIIVGSDDFRIRV 81 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEEEGG-GTEEEEEETTSEEEE
T ss_pred eEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCceeEEe-eccCCcEEEEEEeCC-CCEEEEECCCCEEEE
Confidence 457899999999999999999 68999999999999999998877776 679999999999999 999999999999999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEecc
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~ 171 (396)
||+.+++.+..+..+... |.+++|+|++.+|++|+.|+.|++||++.+..... ....|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~--~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDY---------IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--TFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EETTTCCEEEEEECCSSC---------EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE--EECCCCSCEEEEEECT
T ss_pred EECCCCcEEEEEeCCCCc---------EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh--hhcccCCcEEEEEECC
Confidence 999999988887655443 99999999999999999999999999987643322 2345566899999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC--CCCEEEEEeCCCcEEEEEcccccccCCCcceee
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP--SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVH 249 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 249 (396)
.++.+|++|+.|+.|++||+++......+. ..+...+..+.|+| ++.+|++|+.|+.|++||++++++...
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~------ 223 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT------ 223 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee------
Confidence 667899999999999999997654433322 25667899999987 778999999999999999998765321
Q ss_pred cccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc--E
Q 016032 250 SHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD--V 326 (396)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 326 (396)
+.++.. ...+.|+|+ +.+++ +|+.|+.|++||+.+++++..+..+. ..+.++ +|+|++. +
T Consensus 224 ---~~~h~~~v~~~~~~p~---------~~~l~---s~s~Dg~i~iWd~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ 286 (304)
T 2ynn_A 224 ---LEGHMSNVSFAVFHPT---------LPIII---SGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCI-ATHPTGRKNY 286 (304)
T ss_dssp ---EECCSSCEEEEEECSS---------SSEEE---EEETTSCEEEEETTTCCEEEEECCSS-SSEEEE-EECTTCGGGC
T ss_pred ---eCCCCCCEEEEEECCC---------CCEEE---EEcCCCeEEEEECCCCceeeeccCCC-ccEEEE-EECCCCCceE
Confidence 222322 246889998 66777 89999999999999999998887765 667777 8888875 6
Q ss_pred EEeecCCcEEEEcCCCc
Q 016032 327 LASGSSRSIFIWRPKEK 343 (396)
Q Consensus 327 l~sg~d~~i~iw~~~~~ 343 (396)
+++|+|..+.+|++.+.
T Consensus 287 ~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 287 IASGFDNGFTVLSLGND 303 (304)
T ss_dssp EEEEETTEEEEEECC--
T ss_pred EEEecCCceEEEEeccC
Confidence 88888888889887653
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-46 Score=324.49 Aligned_cols=289 Identities=18% Similarity=0.249 Sum_probs=240.3
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.....|++|.+.|++++|+|++ ++|++|+.||.|+|||+.++.....+ ..|...|.+++|+|+ +.+|++++.|+.|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~~~~~-~~~~~~v~~~~~s~~-~~~l~s~~~d~~v~ 122 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPS-GNYVACGGLDNICS 122 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEE-ECSSSCEEEEEECTT-SSEEEEEETTCEEE
T ss_pred hhheeecCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCCcceEe-ecCCccEEEEEECCC-CCEEEEEeCCCeEE
Confidence 4567899999999999999999 68999999999999999988877776 679999999999999 99999999999999
Q ss_pred EEECCCCccc----ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 91 CTDLETGLAL----SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 91 iwd~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
+|++.++... ..+..+. ..+.++.|++++. +++++.|+.|++||+.++.... ....|...|.+
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~---~~~~h~~~v~~ 189 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHT---------GYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTT---TFTGHTGDVMS 189 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCS---------SCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEE---EECCCSSCEEE
T ss_pred EEECccCCCcceeEEEecCCC---------ccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEE---EEcCCCCceEE
Confidence 9999876432 2222222 2388999988765 8899999999999999876442 34456668999
Q ss_pred EEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcc
Q 016032 167 LHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSRE 246 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 246 (396)
++|+| ++.+|++|+.|+.|++||+++......+ .+|...|.+++|+|++.+|++|+.|+.|++||+++++....
T Consensus 190 ~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--- 263 (340)
T 1got_B 190 LSLAP-DTRLFVSGACDASAKLWDVREGMCRQTF--TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMT--- 263 (340)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEETTTCSEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---
T ss_pred EEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEE--cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE---
Confidence 99999 9999999999999999999875443222 26889999999999999999999999999999987654321
Q ss_pred eeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc
Q 016032 247 IVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD 325 (396)
Q Consensus 247 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 325 (396)
...... .....+.|+|+ |++++ +|+.|+.|++||+.+++.+..+.+|. ..+.++ +|+|+|.
T Consensus 264 ----~~~~~~~~~v~~~~~s~~---------g~~l~---~g~~d~~i~vwd~~~~~~~~~~~~h~-~~v~~~-~~s~dg~ 325 (340)
T 1got_B 264 ----YSHDNIICGITSVSFSKS---------GRLLL---AGYDDFNCNVWDALKADRAGVLAGHD-NRVSCL-GVTDDGM 325 (340)
T ss_dssp ----ECCTTCCSCEEEEEECTT---------SSEEE---EEETTSEEEEEETTTCCEEEEEECCS-SCEEEE-EECTTSS
T ss_pred ----EccCCcccceEEEEECCC---------CCEEE---EECCCCeEEEEEcccCcEeeEeecCC-CcEEEE-EEcCCCC
Confidence 111111 12357899998 78888 79999999999999999888888876 788888 8999999
Q ss_pred EEEeec-CCcEEEEc
Q 016032 326 VLASGS-SRSIFIWR 339 (396)
Q Consensus 326 ~l~sg~-d~~i~iw~ 339 (396)
+|++|+ |+.|+|||
T Consensus 326 ~l~s~s~D~~i~iWd 340 (340)
T 1got_B 326 AVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEcCCccEEecC
Confidence 999999 99999997
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.4e-46 Score=321.56 Aligned_cols=292 Identities=19% Similarity=0.305 Sum_probs=239.7
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.....|++|.+.|++++|+|++ ++|+||+.||+|+|||..+......+ ..|...|.+++|+|+ +.+|++++.|+.++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~~~~~-~~~~~~v~~~~~sp~-g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNKEHAV-TMPCTWVMACAYAPS-GCAIACGGLDNKCS 131 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEE-ECSSSCCCEEEECTT-SSEEEEESTTSEEE
T ss_pred EEEEEecCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCcceEE-ecCCCCEEEEEECCC-CCEEEEeeCCCCEE
Confidence 4567899999999999999999 68999999999999999887776666 568889999999999 99999999999999
Q ss_pred EEECCCCcc------cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 91 CTDLETGLA------LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 91 iwd~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
+|++..... ...+..+. ..+.+++|+|++..|++++.|+.|++||+++++... ....|...+
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~---~~~~h~~~v 199 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHT---------NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ---SFHGHGADV 199 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECS---------SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE---EEECCSSCE
T ss_pred EEEEeccccccccccceeeeccC---------CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE---EEcCCCCCe
Confidence 999875421 22222222 238999999999999999999999999999876443 345566689
Q ss_pred EEEEeccC-CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCC
Q 016032 165 VGLHCNPI-QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSP 243 (396)
Q Consensus 165 ~~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 243 (396)
.+++++|. ++++|++|+.|+.|++||+++.+....+ ..|...|++++|+|++.+|++++.|++|++||+++++....
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 99999873 3579999999999999999875543322 26899999999999999999999999999999987654211
Q ss_pred CcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccC
Q 016032 244 SREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPR 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 323 (396)
. ...........+.|+|+ |++++ +|+.|+.|++||+.+++.+..+.+|. ..+.++ +|+|+
T Consensus 278 ~------~~~~~~~~~~~~~~s~~---------g~~l~---~g~~d~~i~vwd~~~~~~~~~l~~h~-~~v~~l-~~spd 337 (354)
T 2pbi_B 278 Y------SKESIIFGASSVDFSLS---------GRLLF---AGYNDYTINVWDVLKGSRVSILFGHE-NRVSTL-RVSPD 337 (354)
T ss_dssp E------CCTTCCSCEEEEEECTT---------SSEEE---EEETTSCEEEEETTTCSEEEEECCCS-SCEEEE-EECTT
T ss_pred E------cCCCcccceeEEEEeCC---------CCEEE---EEECCCcEEEEECCCCceEEEEECCC-CcEEEE-EECCC
Confidence 0 00011122346889998 77887 78999999999999999888887776 788888 89999
Q ss_pred CcEEEeec-CCcEEEEc
Q 016032 324 DDVLASGS-SRSIFIWR 339 (396)
Q Consensus 324 ~~~l~sg~-d~~i~iw~ 339 (396)
|++|++|+ |+.|+||+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 99999999 99999996
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.8e-46 Score=316.53 Aligned_cols=293 Identities=16% Similarity=0.249 Sum_probs=235.2
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce-----eeeEecCCcccceeEEEEecCCCcEEEEEeC
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS-----EKIVYGNIHSCIVNNIRFNPTNDGTVYAASS 85 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 85 (396)
....+|.+|.+.|++++|+|+++++|++|+.|++|++|++.... ....+ .+|...|.+++|+|+ +.+|++++.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~d-g~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF-KGHSHIVQDCTLTAD-GAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE-ECCSSCEEEEEECTT-SSEEEEEET
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE-eCCcccEEEEEECCC-CCEEEEEeC
Confidence 45578999999999999999876799999999999999987532 23333 689999999999999 999999999
Q ss_pred CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 86 DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 86 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
|++|++||+.+++....+..+... |.+++|+|++.+|++++.|+.|++||++.. .......|...+.
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~v~ 152 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSD---------VMSVDIDKKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVS 152 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC---------EEEEEECTTSCEEEEEETTSCEEEEETTSC----EEEEECCCSSCEE
T ss_pred CCEEEEEECCCCCeeEEEccCCCc---------EEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eEEEEeccCCcEE
Confidence 999999999999988877655433 999999999999999999999999999753 2223455667899
Q ss_pred EEEeccC-----CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 166 GLHCNPI-----QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 166 ~~~~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
++++.|. ++..|++++.|+.|++||+++.+.... ..+|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999983 234899999999999999976443222 237999999999999999999999999999999998765
Q ss_pred cCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC-------CCCC
Q 016032 241 DSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP-------NITT 313 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~-------~~~~ 313 (396)
.... ..+.....++|+|+ +.+++ ++. +..+++|++..+..+..+..+ +...
T Consensus 231 ~~~~---------~~~~~v~~~~~sp~---------~~~la---~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (319)
T 3frx_A 231 MYTL---------SAQDEVFSLAFSPN---------RYWLA---AAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPH 288 (319)
T ss_dssp EEEE---------ECCSCEEEEEECSS---------SSEEE---EEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCC
T ss_pred EEEe---------cCCCcEEEEEEcCC---------CCEEE---EEc-CCCcEEEEeCcCeeeeccCccccccccCcCcc
Confidence 3211 12233468999998 66666 333 445999999887765554322 2244
Q ss_pred CcceeeeccCCcEEEeec-CCcEEEEcCCCc
Q 016032 314 ISPVNKLHPRDDVLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 314 i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~ 343 (396)
+.++ +|+|+|++|++|+ |+.|+||++.++
T Consensus 289 v~~~-~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 289 AVSL-AWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEE-EECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred eeEE-EECCCCCEEEEeecCceEEEEEEeec
Confidence 5666 8999999999999 999999998764
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.8e-45 Score=310.89 Aligned_cols=299 Identities=19% Similarity=0.340 Sum_probs=244.7
Q ss_pred CCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC
Q 016032 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD 86 (396)
Q Consensus 7 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 86 (396)
.|.......+.+|.+.|++++|+|++ ++|++|+.||.|++|++.++.....+ .+|...|.+++|+|+ +++|++++.|
T Consensus 10 ~~~~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~s~~~d 86 (312)
T 4ery_A 10 KPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSD-SNLLVSASDD 86 (312)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred CCCceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcccchhh-ccCCCceEEEEEcCC-CCEEEEECCC
Confidence 34556677899999999999999999 68999999999999999988777666 689999999999999 9999999999
Q ss_pred CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 87 GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
+.|++||+.+++.+..+..+... +.+++|+|++++|++++.|+.|++||+++++... ....+..++.+
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~ 154 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNY---------VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSA 154 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC---------EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEE
T ss_pred CEEEEEECCCCcEEEEEcCCCCC---------EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEE
Confidence 99999999999888777654432 9999999999999999999999999999865432 33445668999
Q ss_pred EEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcc
Q 016032 167 LHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSRE 246 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 246 (396)
++|+| ++.+|++++.|+.|++||+++.+....+. ..+...+..++|+|++++|++++.|+.|++||+++++......
T Consensus 155 ~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~- 231 (312)
T 4ery_A 155 VHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT- 231 (312)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEETTTCCEEEEEC-CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEC-
T ss_pred EEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEEe-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEE-
Confidence 99999 99999999999999999998754432221 2466789999999999999999999999999999876532111
Q ss_pred eeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcE
Q 016032 247 IVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDV 326 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 326 (396)
........+...+++.. +.+++ +|+.|+.|++||+.+++.+..+.+|. ..+..+ +|+|++++
T Consensus 232 -----~~~~~~~~~~~~~~~~~--------~~~l~---sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~-~~~p~~~~ 293 (312)
T 4ery_A 232 -----GHKNEKYCIFANFSVTG--------GKWIV---SGSEDNLVYIWNLQTKEIVQKLQGHT-DVVIST-ACHPTENI 293 (312)
T ss_dssp -----SSCCSSSCCCEEEECSS--------SCEEE---ECCTTSCEEEEETTTCCEEEEECCCS-SCEEEE-EECSSSSE
T ss_pred -----ecCCceEEEEEEEEeCC--------CcEEE---EECCCCEEEEEECCCchhhhhhhccC-CcEEEE-eecCcCCc
Confidence 11111111223333221 66677 79999999999999999998888876 777777 89999999
Q ss_pred EEeec---CCcEEEEcCC
Q 016032 327 LASGS---SRSIFIWRPK 341 (396)
Q Consensus 327 l~sg~---d~~i~iw~~~ 341 (396)
|++++ |+.|++|+.+
T Consensus 294 l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 294 IASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECTTTCCEEEEECC
T ss_pred eEEEEccCCccEEEecCC
Confidence 99874 8999999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.3e-46 Score=321.37 Aligned_cols=304 Identities=10% Similarity=0.127 Sum_probs=221.8
Q ss_pred CCCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeC------CCcEEEeecccceeeeE---ecCCcccceeEEEEe
Q 016032 3 PAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDK------KGQVGVWDFYKVSEKIV---YGNIHSCIVNNIRFN 73 (396)
Q Consensus 3 p~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~---~~~~~~~~v~~~~~~ 73 (396)
+.|.+|... ...|...|++++|+||| ++|++|+. |+.|++|+..++..... ...+|...|.+++|+
T Consensus 29 ~~w~~p~~~----p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s 103 (357)
T 4g56_B 29 SAWGRPVTA----PACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWV 103 (357)
T ss_dssp ---------------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEE
T ss_pred cccCCCCCC----cccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEc
Confidence 456665443 35799999999999999 68999997 67899999876543221 124588899999999
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc
Q 016032 74 PTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE 153 (396)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~ 153 (396)
|+ + .+++++.||+|++||+.+++.......... ++ ...|.+++|+|++++|++++.|+.|++||+++++...
T Consensus 104 ~d-~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~---~h--~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~- 175 (357)
T 4g56_B 104 SE-K-GILVASDSGAVELWEILEKESLLVNKFAKY---EH--DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK- 175 (357)
T ss_dssp TT-T-EEEEEETTSCEEEC--------CCCCEEEC---CC--SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE-
T ss_pred CC-C-CEEEEECCCEEEEeeccccceeEEEeeccC---CC--CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-
Confidence 97 5 566778899999999998876543322111 11 1349999999999999999999999999999875443
Q ss_pred ceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCC-CCEEEEEeCCCcEEE
Q 016032 154 AILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS-GSKILTTSQDNRLRI 232 (396)
Q Consensus 154 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i 232 (396)
....|...|.+++|+|....++++++.|+.|++||+++.+....+....+...+.+++|+|+ +.+|++|+.|+.|++
T Consensus 176 --~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 176 --SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp --EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred --EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 33456668999999994446899999999999999988766555554467788999999996 568899999999999
Q ss_pred EEcccccccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCC
Q 016032 233 WDSIFGNLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNI 311 (396)
Q Consensus 233 wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~ 311 (396)
||+++++.... +..+. ....++|+|+. +++++ +|+.|++|+|||+.+++++..+ +|.
T Consensus 254 wd~~~~~~~~~---------~~~~~~~v~~l~~sp~~--------~~~la---sgs~D~~i~iwd~~~~~~~~~~-~H~- 311 (357)
T 4g56_B 254 VNIKNPDSAQT---------SAVHSQNITGLAYSYHS--------SPFLA---SISEDCTVAVLDADFSEVFRDL-SHR- 311 (357)
T ss_dssp EESSCGGGCEE---------ECCCSSCEEEEEECSSS--------SCCEE---EEETTSCEEEECTTSCEEEEEC-CCS-
T ss_pred EECCCCcEeEE---------EeccceeEEEEEEcCCC--------CCEEE---EEeCCCEEEEEECCCCcEeEEC-CCC-
Confidence 99998775431 11222 23478899973 35666 7899999999999999887654 444
Q ss_pred CCCcceeeecc-CCcEEEeec-CCcEEEEcCCCcc
Q 016032 312 TTISPVNKLHP-RDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 312 ~~i~~~~~~~~-~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
..|.++ +|+| ++.+|++|+ |++|++|++.+..
T Consensus 312 ~~V~~v-afsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 312 DFVTGV-AWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SCEEEE-EECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCEEEE-EEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 788888 8998 799999999 9999999997644
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-44 Score=312.63 Aligned_cols=296 Identities=18% Similarity=0.241 Sum_probs=229.2
Q ss_pred cceeeeccccCCeEEEEe-----cC-CCCcEEEEEeCCCcEEEeecccce------eeeEecCCcccceeEEEEecCCCc
Q 016032 11 VNCAVIRYHSRRVTCLEF-----HP-TNNHILLSGDKKGQVGVWDFYKVS------EKIVYGNIHSCIVNNIRFNPTNDG 78 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~-----~~-~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~ 78 (396)
.....|++|.+.|++++| ++ ++ .+|++|+.|++|+|||+.... .......+|...|.+++|+|+ +.
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~-~~ 89 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE-NC 89 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS-TT
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC-CC
Confidence 456789999999999999 77 66 689999999999999997532 122233789999999999999 99
Q ss_pred EEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeee
Q 016032 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIH 158 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~ 158 (396)
++++++.|++|++||+++++.+..+..+... |.+++|+|++++|++++.|+.|++||+..... .......
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~---------v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~ 159 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSE---------VYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSSAEKE 159 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSC---------EEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EECCTTT
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCc---------EEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eeeeccc
Confidence 9999999999999999999888777655433 99999999999999999999999999974221 1111122
Q ss_pred cCCccEEEEEeccCCC----------CEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC
Q 016032 159 RKGSKVVGLHCNPIQP----------ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN 228 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~----------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 228 (396)
.+...+.+++|+| ++ .+|++++.|+.|++||... +. .....+|...|.+++|+|++++|++|+.|+
T Consensus 160 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~--~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg 235 (343)
T 2xzm_R 160 NHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI--RYTFKAHESNVNHLSISPNGKYIATGGKDK 235 (343)
T ss_dssp SCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE--EEEEECCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce--eEEEcCccccceEEEECCCCCEEEEEcCCC
Confidence 4556899999999 55 7899999999999999532 11 112236889999999999999999999999
Q ss_pred cEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhh--hh
Q 016032 229 RLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA--EV 306 (396)
Q Consensus 229 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~--~~ 306 (396)
.|++||+...... ... +........++|+|+ +++++ ++.|+.|++|++.+++... .+
T Consensus 236 ~v~iwd~~~~~~~--~~~------~~~~~~v~~v~~sp~---------~~~la----~~~d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 236 KLLIWDILNLTYP--QRE------FDAGSTINQIAFNPK---------LQWVA----VGTDQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EEEEEESSCCSSC--SEE------EECSSCEEEEEECSS---------SCEEE----EEESSCEEEEESSSCCSCSEEEC
T ss_pred eEEEEECCCCccc--cee------ecCCCcEEEEEECCC---------CCEEE----EECCCCEEEEEeCCCCCCceEEe
Confidence 9999999543321 111 111122457899998 55555 3457889999998876544 33
Q ss_pred cC----------CCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 307 MD----------PNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 307 ~~----------~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
.. .+...+.++ +|+|+|++|++|+ ||.|++|++.+++
T Consensus 295 ~~~~~~~~~~~~~~~~~v~~~-~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 295 EAEPITKAEGQKGKNPQCTSL-AWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCCSGGGBTTBCCSCCCEEEE-EECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred ecCcchhhhhhcCCCCceEEE-EECCCCCeEEEecCCceEEEEEEEccC
Confidence 21 233567777 8999999999999 9999999987653
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-44 Score=335.99 Aligned_cols=318 Identities=13% Similarity=0.213 Sum_probs=246.7
Q ss_pred ccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 10 QVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 10 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
+.....+.+|.+.|++++|+|+++.+|++|+.|++|++||..+.+....+ .+|...|.+++|+|+ +.+|++++.|++|
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspd-g~~las~s~D~~i 214 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPD-GSLFASTGGDGTI 214 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTT-SSEEEEEETTSCE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCC-CCEEEEEECCCcE
Confidence 34556789999999999999998657999999999999999887776666 789999999999999 9999999999999
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccc---------------
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEA--------------- 154 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~--------------- 154 (396)
++||+.+++....+..... ....+...|.+++|+|++++|++++.|+.|++||+.+++.....
T Consensus 215 ~lwd~~~g~~~~~~~~~~~--~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 215 VLYNGVDGTKTGVFEDDSL--KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EEEETTTCCEEEECBCTTS--SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred EEEECCCCcEeeeeccccc--cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 9999999887766532111 00112234999999999999999999999999999876432211
Q ss_pred -------------------------eeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcc---------
Q 016032 155 -------------------------ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSL--------- 200 (396)
Q Consensus 155 -------------------------~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~--------- 200 (396)
.....|...|.+++|+| ++.+|++++.|+.|++||+.+......+
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence 11234666899999999 9999999999999999998754321100
Q ss_pred -----------------------------------------------------------------------ccCCCCCce
Q 016032 201 -----------------------------------------------------------------------CDLPHKRVV 209 (396)
Q Consensus 201 -----------------------------------------------------------------------~~~~~~~~i 209 (396)
..+.+...+
T Consensus 372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v 451 (611)
T 1nr0_A 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS 451 (611)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCE
T ss_pred EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCc
Confidence 000123457
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccc
Q 016032 210 NSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAAL 289 (396)
Q Consensus 210 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d 289 (396)
.+++|+|+|++|++|+.|+.|++||+.++.... .. ..........++|+|+ |++++ +++.|
T Consensus 452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~-----~~--~~~h~~~v~~v~fspd---------g~~la---s~s~d 512 (611)
T 1nr0_A 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE-----VK--TIVHPAEITSVAFSNN---------GAFLV---ATDQS 512 (611)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEEETTEEEE-----EE--EEECSSCEEEEEECTT---------SSEEE---EEETT
T ss_pred eEEEEeCCCCEEEEeCCCCeEEEEEccCCceee-----ee--ccCCCCceEEEEECCC---------CCEEE---EEcCC
Confidence 889999999999999999999999997654311 00 1111123457899998 88888 89999
Q ss_pred cceEEEEcCc-cchhhh-hcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcc-ee-eecccc
Q 016032 290 HPIDFIDITT-GQLVAE-VMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKS-EL-VEQKEE 352 (396)
Q Consensus 290 ~~i~vwd~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~-~~-~~~~~~ 352 (396)
++|++|++.+ ++++.. +...|...|.++ +|+|+|++|++|+ |++|++|++.+++ .+ ..+.+|
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v-~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h 579 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACV-SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 579 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEE-EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSS
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEE-EECCCCCEEEEEECCCcEEEEECCCcccccchhhccC
Confidence 9999999987 665554 334344788888 9999999999999 9999999999875 33 456666
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-44 Score=308.95 Aligned_cols=304 Identities=16% Similarity=0.226 Sum_probs=221.8
Q ss_pred CccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce--eeeEecC-CcccceeEEEEecCCCcEEEEEeC
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS--EKIVYGN-IHSCIVNNIRFNPTNDGTVYAASS 85 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~ 85 (396)
...++..|++|.++|++++|+|+ +|++|+.|+.|+|||+..+. ....+.. +|...|.+++|+|+ +.+|++++.
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~las~s~ 78 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH-TSLLAAGSF 78 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT-SSEEEEEET
T ss_pred ccccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC-CCEEEEEeC
Confidence 44567899999999999999986 79999999999999998753 3333323 49999999999999 999999999
Q ss_pred CCeEEEEECCCC-------cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCC-Cccceee
Q 016032 86 DGTVSCTDLETG-------LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSR-SGEAILI 157 (396)
Q Consensus 86 dg~v~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~-~~~~~~~ 157 (396)
|++|++|++... +....+..+. ..|.+++|+|++++|++++.|+.|++||++.... .......
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~---------~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~ 149 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHE---------NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL 149 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC-------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCC---------CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe
Confidence 999999998643 2222332222 3399999999999999999999999999954322 2222234
Q ss_pred ecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCC--CCEEEEEeCCCcEEEEE
Q 016032 158 HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPS--GSKILTTSQDNRLRIWD 234 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd 234 (396)
..|...|.+++|+| ++.+|++++.|++|++||+++... ..+..+ +|...|.+++|+|+ +.+|++++.|++|++||
T Consensus 150 ~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 150 QEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp CCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred ccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEE
Confidence 55667899999999 999999999999999999875421 122223 79999999999998 77899999999999999
Q ss_pred cccccccCCCcceeeccccc--ccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc--hhhhh-cCC
Q 016032 235 SIFGNLDSPSREIVHSHDFN--RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ--LVAEV-MDP 309 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~--~~~~~-~~~ 309 (396)
+..+..... ........+. .......++|++. + +++ +++.|+.|++|+..+++ ..... .+|
T Consensus 228 ~~~~~~~~~-~~~~~~~~~~~~h~~~v~~v~~s~~---------~-~l~---s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 228 YMGDDEDDQ-QEWVCEAILPDVHKRQVYNVAWGFN---------G-LIA---SVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EEEECTTSC-EEEEEEEECCSCCSSCEEEEEECTT---------S-CEE---EEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred ecCCCcccc-ceeEEeeecccccccceEEEEEcCC---------C-EEE---EEeCCCEEEEEEcCCCceEEEecccccc
Confidence 986532110 0001111111 1223357888864 3 444 68899999999998763 23232 344
Q ss_pred CCCCCcceeeecc--CCcEEEeec-CCcEEEEcCCC
Q 016032 310 NITTISPVNKLHP--RDDVLASGS-SRSIFIWRPKE 342 (396)
Q Consensus 310 ~~~~i~~~~~~~~--~~~~l~sg~-d~~i~iw~~~~ 342 (396)
....+.++ +|+| ++++|++|+ ||.|+||++.+
T Consensus 294 ~~~~v~~v-~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVV-KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEE-EEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEE-EEecCCCceEEEEecCCCcEEEEEecc
Confidence 42367777 8999 789999999 99999999865
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.2e-44 Score=332.67 Aligned_cols=310 Identities=13% Similarity=0.167 Sum_probs=242.9
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC------CcccceeEEEEecCCCc
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN------IHSCIVNNIRFNPTNDG 78 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~ 78 (396)
|+.++..+...+.+|.+.|++++|+|++ ++|++|+.|++|+|||+.+++....+.. +|...|.+++|+|+ +.
T Consensus 175 wd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~ 252 (611)
T 1nr0_A 175 FEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GT 252 (611)
T ss_dssp EETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT-SS
T ss_pred EECCCCeEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC-CC
Confidence 5666677788999999999999999999 6899999999999999988877666532 79999999999999 99
Q ss_pred EEEEEeCCCeEEEEECCCCcccceeecCCC------------------------------------CCCCCCcceeeeEE
Q 016032 79 TVYAASSDGTVSCTDLETGLALSLMNVNPN------------------------------------GWHGPRTWRMLYGM 122 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~v~~~ 122 (396)
+|++++.|++|++||+.+++....+..... ...+ +...|.++
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g--h~~~v~~l 330 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG--HNKAITAL 330 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC--CSSCEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC--CCCCEEEE
Confidence 999999999999999998877655432210 0012 22459999
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCCccce-----------------------------------------------
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAI----------------------------------------------- 155 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~----------------------------------------------- 155 (396)
+|+|++++|++++.|+.|++||+.++.......
T Consensus 331 ~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~ 410 (611)
T 1nr0_A 331 SSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKL 410 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEEC
T ss_pred EEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeec
Confidence 999999999999999999999987643211000
Q ss_pred --------------------------------eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC
Q 016032 156 --------------------------------LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL 203 (396)
Q Consensus 156 --------------------------------~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 203 (396)
....+...+.+++|+| ++.+|++|+.|+.|++||+...... .+...
T Consensus 411 ~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp-dg~~lasgs~D~~v~lwd~~~~~~~-~~~~~ 488 (611)
T 1nr0_A 411 SSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASVS-EVKTI 488 (611)
T ss_dssp SSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEEE-EEEEE
T ss_pred CCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC-CCCEEEEeCCCCeEEEEEccCCcee-eeecc
Confidence 0001123578899999 9999999999999999999753321 12224
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc-ccccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEeeeee
Q 016032 204 PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF-GNLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYIS 281 (396)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~ 281 (396)
+|...|++++|+|+|++|++++.|+.|++|++.+ +++... .....| .....++|+|+ |++++
T Consensus 489 ~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~-------~~~~~H~~~V~~v~fspd---------g~~la 552 (611)
T 1nr0_A 489 VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT-------NSWTFHTAKVACVSWSPD---------NVRLA 552 (611)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC-------CCCCCCSSCEEEEEECTT---------SSEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee-------eeeeecccceeEEEECCC---------CCEEE
Confidence 6889999999999999999999999999999987 443221 011112 22357999998 88888
Q ss_pred eecccccccceEEEEcCccch-h-hhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCC
Q 016032 282 ENYNGAALHPIDFIDITTGQL-V-AEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 282 ~~~~g~~d~~i~vwd~~~~~~-~-~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
+|+.|++|++|++.++.. + ..+.+|....+.++ +|+|+++ |++|+ |++|++|++.
T Consensus 553 ---sgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v-~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 553 ---TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSV-IWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp ---EEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEE-EEEETTE-EEEEETTSCEEEEECC
T ss_pred ---EEECCCcEEEEECCCcccccchhhccCcccCeeEE-EEcCCCE-EEEecCCCCEEEEecc
Confidence 899999999999988753 3 44556635788888 8999999 88888 9999999973
No 16
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-43 Score=311.51 Aligned_cols=316 Identities=26% Similarity=0.424 Sum_probs=244.5
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCC
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSD 86 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d 86 (396)
........+.+|.+.|++++|+|+++++|++|+.||.|+|||+.+......+. .+|...|.+++|+|+++.+|++++.|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 45566778999999999999999985689999999999999999877666553 36999999999999437999999999
Q ss_pred CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 87 GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
+.|++||+.+ .....+..... ....+.+++|+|++.+|++++.++.|++||++. . .......+...|.+
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~---~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDS------WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-H---EIFKEKLHKAKVTH 209 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCC------SSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-C---EEEEEECSSSCEEE
T ss_pred CEEEEEECCC-CceEEEeccCC------CCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-C---EEEEeccCCCcEEE
Confidence 9999999986 44444432221 113399999999999999999999999999943 2 22344556678999
Q ss_pred EEeccCCCC-EEEEeeCCCcEEEEecCCCCC-CCccccCCCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEcccccccCC
Q 016032 167 LHCNPIQPE-LLLSCGNDHFARIWDIRRLEA-GSSLCDLPHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIFGNLDSP 243 (396)
Q Consensus 167 ~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~ 243 (396)
++|+| ++. +|++++.|+.|++||+++.+. ...+..++|...|.+++|+| ++.+|++++.|+.|++||+++++....
T Consensus 210 ~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 210 AEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred EEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 99999 777 999999999999999987443 23344447899999999999 999999999999999999998876432
Q ss_pred CcceeecccccccCCceeEEeCCCCCCCceee--EeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeec
Q 016032 244 SREIVHSHDFNRHLTPFRAEWDPKDPSESLAV--IGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLH 321 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 321 (396)
.. .+......+..++...|+|......+.. +|++ +|+.|+.|++||+.+++.+..+.++....+..+++|+
T Consensus 289 ~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-----s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s 361 (383)
T 3ei3_B 289 II--IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-----LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFS 361 (383)
T ss_dssp EE--ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-----CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEEC
T ss_pred cc--cccccccccccceEEeccCCCCceEEEecCCccc-----ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEe
Confidence 21 1222223344445566777632222111 1333 4779999999999999999998876434444433899
Q ss_pred cCCcEEEeecCCcEEEEcCCC
Q 016032 322 PRDDVLASGSSRSIFIWRPKE 342 (396)
Q Consensus 322 ~~~~~l~sg~d~~i~iw~~~~ 342 (396)
|++++|++|+|+.|+||++++
T Consensus 362 ~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 362 PTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp TTSSEEEEEETTEEEEEECC-
T ss_pred cCccEEEEecCCcEEEEecCC
Confidence 999999999999999999875
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.1e-44 Score=308.30 Aligned_cols=293 Identities=11% Similarity=0.124 Sum_probs=221.2
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce----------eeeEecCCcccceeEEEEecCCCcEEEEEeCC
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS----------EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD 86 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 86 (396)
..|...|.+++|+||| ++|++++ |+++++||..... ........|...|.+++|+|+ ..|++|+.|
T Consensus 27 ~~~~~~v~~~~fs~dG-~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDG-ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE--RGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTS-CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT--TEEEEEETT
T ss_pred ccccCCEEEEEECCCC-CEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC--CeEEEEECC
Confidence 4577889999999999 6788777 7788888743110 001111236678999999997 578899999
Q ss_pred CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 87 GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
|+|++||+.+++.......... +|. ..|.+++|+|++++|++|+.|+.|++||+.+++... ....|...|.+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~---~H~--~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~---~~~~h~~~V~~ 174 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKY---EHD--DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS---SYRAHAAQVTC 174 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEE---CCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCSSCEEE
T ss_pred CEEEEEeccCCCceeEeecccc---CCC--CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE---EEcCcCCceEE
Confidence 9999999999887665442111 111 239999999999999999999999999999876543 34556678999
Q ss_pred EEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 167 LHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
++|+|....+|++++.|+.|++||+++.+....+....+...+.+++|+| ++.+|++|+.||.|++||+++++.+..
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~-- 252 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS-- 252 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE--
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE--
Confidence 99999444689999999999999998876655554445667899999999 567889999999999999998876432
Q ss_pred ceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCC
Q 016032 246 EIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRD 324 (396)
Q Consensus 246 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 324 (396)
+..+.. ...++|+|+. .++++ +|+.|++|+|||+.+++++ .+.+|. ..|.++ +|+|++
T Consensus 253 -------~~~h~~~v~~v~fsp~g--------~~~la---sgs~D~~i~vwd~~~~~~~-~~~~H~-~~V~~v-~~sp~~ 311 (344)
T 4gqb_B 253 -------SAVHSQCVTGLVFSPHS--------VPFLA---SLSEDCSLAVLDSSLSELF-RSQAHR-DFVRDA-TWSPLN 311 (344)
T ss_dssp -------EECCSSCEEEEEECSSS--------SCCEE---EEETTSCEEEECTTCCEEE-EECCCS-SCEEEE-EECSSS
T ss_pred -------EcCCCCCEEEEEEccCC--------CeEEE---EEeCCCeEEEEECCCCcEE-EEcCCC-CCEEEE-EEeCCC
Confidence 222222 3478999983 25666 7899999999999998865 455665 788888 899998
Q ss_pred c-EEEeec-CCcEEEEcCCCcc
Q 016032 325 D-VLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 325 ~-~l~sg~-d~~i~iw~~~~~~ 344 (396)
+ +|++|+ |++|++|++.+..
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC--
T ss_pred CeEEEEEcCCCeEEEEECCCCC
Confidence 6 677888 9999999997754
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.6e-44 Score=308.69 Aligned_cols=297 Identities=15% Similarity=0.232 Sum_probs=234.5
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee----eeEecCCcccceeEEEEecCCCcEEEEEeCC
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE----KIVYGNIHSCIVNNIRFNPTNDGTVYAASSD 86 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 86 (396)
....+|+||.+.|++|+|+|+++++|+||+.|++|+|||+.+.+. ......+|...|.+++|+|+ +.+|++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d-g~~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD-GQFALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC-CCEEEEEccc
Confidence 445689999999999999998657999999999999999976432 22233789999999999999 9999999999
Q ss_pred CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 87 GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
+.|++|+................ +..+.+++++.+|++++.|+.+++||+....... .....+...+..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~--~~~~~~~~~v~~ 176 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKD---------VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT--VQDESHSEWVSC 176 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC---------EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE--ECSSSCSSCEEE
T ss_pred ccceEEeecccceeeeecCCCCc---------eeEEEEeecCccceeecCCCeEEEEEeCCCceEE--EEeccccCcccc
Confidence 99999999988776665544332 7788899999999999999999999987654322 223345568999
Q ss_pred EEeccC-CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 167 LHCNPI-QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 167 ~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
++|++. ...++++++.|+.|++||+++.+....+ .+|...|++++|+|++++|++|+.|+.|++||+++.+.+..
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~-- 252 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH--IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-- 252 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE--
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe--cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee--
Confidence 999873 2357889999999999999875543322 36899999999999999999999999999999988765321
Q ss_pred ceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcC--------CCCCCCcce
Q 016032 246 EIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD--------PNITTISPV 317 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~--------~~~~~i~~~ 317 (396)
+........+.|+|+ +.+++ ++.|+.|++||+.++..+..+.. .+...|.++
T Consensus 253 -------~~~~~~v~~~~~~~~---------~~~~~----~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 312 (340)
T 4aow_A 253 -------LDGGDIINALCFSPN---------RYWLC----AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 312 (340)
T ss_dssp -------EECSSCEEEEEECSS---------SSEEE----EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred -------ecCCceEEeeecCCC---------Cceee----ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence 112223346788886 44443 56789999999988776555432 234677888
Q ss_pred eeeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 318 NKLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 318 ~~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
+|+|+|++|++|+ ||.|+||++.+|.
T Consensus 313 -~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 313 -AWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -EECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred -EECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 8999999999999 9999999999886
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-43 Score=307.78 Aligned_cols=296 Identities=19% Similarity=0.253 Sum_probs=230.1
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCc------------------ccceeEEEEecCCCc
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIH------------------SCIVNNIRFNPTNDG 78 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~ 78 (396)
.+|.+.|.+++|+|+| ++||+|+ ++.++||++.++.....+. .| ...|.+++|+|+ +.
T Consensus 61 ~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~ 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLS-DDSAANKDPENLNTSSSPSSDLYIRSVCFSPD-GK 136 (393)
T ss_dssp EECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEEC-C-----------------CCCCBEEEEEECTT-SS
T ss_pred cCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEec-CccccccccccccccccCCCceeEEEEEECCC-CC
Confidence 3699999999999999 6888876 6899999999887666552 22 224999999999 99
Q ss_pred EEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeee
Q 016032 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIH 158 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~ 158 (396)
+|++|+.|+.|++||+.+++....+..+... |.+++|+|++.+|++++.|+.|++||++++.... ..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~---------v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~----~~ 203 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQD---------IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL----TL 203 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSC---------EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----EE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCC---------EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE----EE
Confidence 9999999999999999998887776544332 9999999999999999999999999999865432 22
Q ss_pred cCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccc-----cCCCCCceeEEEEcCCCCEEEEEeCCCcEEEE
Q 016032 159 RKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLC-----DLPHKRVVNSAYFSPSGSKILTTSQDNRLRIW 233 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 233 (396)
.+...+.+++|+|.++.+|++|+.|+.|++||+++......+. ..+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 2344799999999788999999999999999998754432221 13688999999999999999999999999999
Q ss_pred EcccccccCCCcce---eecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC
Q 016032 234 DSIFGNLDSPSREI---VHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 234 d~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
|+++.......... .....+.++.. ...++|+|+ +.+++ +|+.|+.|++||+.+++.+..+.+|
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---------~~~l~---sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN---------DEYIL---SGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGG---------GCEEE---EEETTSEEEEEETTTCCEEEEEECC
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC---------CCEEE---EEeCCCeEEEEECCCCeEEEEECCC
Confidence 99875432211100 00111222222 346788887 77887 8999999999999999999888887
Q ss_pred CCCCCcceeeec------cCCcEEEeec-CCcEEEEcCCCc
Q 016032 310 NITTISPVNKLH------PRDDVLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 310 ~~~~i~~~~~~~------~~~~~l~sg~-d~~i~iw~~~~~ 343 (396)
. ..+.++ +|+ |++.+|++|+ ||.|+||++...
T Consensus 352 ~-~~v~~v-~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 352 R-NSVISV-AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp S-SCEEEE-EECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred C-CCEEEE-EecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 6 677777 665 4789999999 999999997543
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.2e-43 Score=329.76 Aligned_cols=293 Identities=16% Similarity=0.218 Sum_probs=232.0
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee----eeEecCCcccceeEEEEecCCCcEEEEEeCCCe
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE----KIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 88 (396)
...+++|.+.|++++|+|++..+|+||+.|++|+||++.+... ......+|...|.+++|+|+ +.+|++|+.|++
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGE 453 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC-CCEEEEEeCCCc
Confidence 4578999999999999998767999999999999999976321 22233689999999999999 999999999999
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
|++||+.++.....+..+... |.+++|+|++++|++++.|+.|++||+..............|...|.+++
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~---------v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKD---------VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSC---------EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEEEECCCCcceeEEeCCCCC---------EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 999999999888777655443 99999999999999999999999999865322211111234556899999
Q ss_pred eccCCC--CEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcc
Q 016032 169 CNPIQP--ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSRE 246 (396)
Q Consensus 169 ~~~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 246 (396)
|+| ++ ..|++++.|+.|++||+++.+....+ .+|...|++++|+|++++|++|+.||.|++||+++++.+...
T Consensus 525 ~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~-- 599 (694)
T 3dm0_A 525 FSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL-- 599 (694)
T ss_dssp ECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC--
T ss_pred EeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe--
Confidence 999 55 58999999999999999865443222 369999999999999999999999999999999988754321
Q ss_pred eeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCC---------------
Q 016032 247 IVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNI--------------- 311 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~--------------- 311 (396)
........++|+|+ +.+++ ++.++.|++||+.+++.+..+..+..
T Consensus 600 -------~~~~~v~~~~~sp~---------~~~l~----~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 600 -------EANSVIHALCFSPN---------RYWLC----AATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp -------BCSSCEEEEEECSS---------SSEEE----EEETTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred -------cCCCcEEEEEEcCC---------CcEEE----EEcCCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 12223457889997 55555 34466699999999887766543211
Q ss_pred ---CCCcceeeeccCCcEEEeec-CCcEEEEcCC
Q 016032 312 ---TTISPVNKLHPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 312 ---~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
..+.++ +|+|+|++|++|+ ||.|+||++.
T Consensus 660 ~~~~~~~~l-~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 660 RKVIYCTSL-NWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -CCCCEEEE-EECTTSSEEEEEETTSEEEEEEC-
T ss_pred ceeEEeeeE-EEcCCCCEEEEEcCCCeEEEEecc
Confidence 113445 8999999999999 9999999985
No 21
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=302.13 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=246.2
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.....+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.....+ .+|...|.+++|+|+ +.+|++++.||.|+
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGERLGTL-DGHTGTIWSIDVDCF-TKYCVTGSADYSIK 99 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTT-SSEEEEEETTTEEE
T ss_pred cccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCchhhhhh-hhcCCcEEEEEEcCC-CCEEEEEeCCCeEE
Confidence 3446789999999999999998 68999999999999999998877777 689999999999999 99999999999999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-----CeEEEEeCCCCCCCccce--------ee
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-----GFLYLVDARTNSRSGEAI--------LI 157 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~i~d~~~~~~~~~~~--------~~ 157 (396)
+||+.+++.+..+... ..+.+++|+|++.++++++.+ +.|++||+.......... ..
T Consensus 100 iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 100 LWDVSNGQCVATWKSP----------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEETTTCCEEEEEECS----------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred EEECCCCcEEEEeecC----------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 9999999988877622 229999999999999999999 999999998765432211 11
Q ss_pred ecCC--ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEE
Q 016032 158 HRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234 (396)
Q Consensus 158 ~~~~--~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 234 (396)
..+. ..+.+++|+| ++.+|++++.||.|++||+++.. ..+..+ .|...|.+++|+|++.+|++++.|+.|++||
T Consensus 170 ~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 170 ITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp ECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 2222 3799999999 99999999999999999998621 122222 5888999999999999999999999999999
Q ss_pred cccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccccc--------------ceEEEEcCcc
Q 016032 235 SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALH--------------PIDFIDITTG 300 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~--------------~i~vwd~~~~ 300 (396)
+++++..... ........+.|+|+ +++++ .++.++ .+++||..++
T Consensus 247 ~~~~~~~~~~---------~~~~~~~~~~~~~~---------~~~l~---~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 247 VSTLQVLKKY---------ETDCPLNTAVITPL---------KEFII---LGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp TTTCCEEEEE---------ECSSCEEEEEECSS---------SSEEE---EEECCC-------------CEEEEEETTTC
T ss_pred CCCCceeeee---------cCCCCceeEEecCC---------CceEE---EeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 9987653211 12233347889988 55555 444444 7999999999
Q ss_pred chhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeec
Q 016032 301 QLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 301 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~ 349 (396)
+.+..+.+|. ..+.++ +|+|++++|++|+ ||.|++|++.++.....+
T Consensus 306 ~~~~~~~~~~-~~v~~~-~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 306 EEIGRVQGHF-GPLNTV-AISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp CEEEEEECCS-SCEEEE-EECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred cchhheeccc-CcEEEE-EECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 9998888776 778888 8999999999999 999999999887655444
No 22
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.6e-42 Score=296.47 Aligned_cols=303 Identities=12% Similarity=0.139 Sum_probs=234.3
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeC---CCcEEEeecccceeeeEecCCcccceeEEEEecCC--CcEEEEEeCC
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDK---KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN--DGTVYAASSD 86 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~d 86 (396)
....+++|.+.|++++|+|++..++++|+. ||.|+|||+.++........+|...|.+++|+|+. +.+|++++.|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 345678899999999999999777788877 99999999998876655545799999999999983 5899999999
Q ss_pred CeEEEEECCCCc-ccceeecCCCCCCCCCcceeeeEE------EeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec
Q 016032 87 GTVSCTDLETGL-ALSLMNVNPNGWHGPRTWRMLYGM------DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR 159 (396)
Q Consensus 87 g~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~ 159 (396)
|.|++||+.+++ ....+..+.. .|.++ +|+|++++|++++.+|.|++||++.+.........+.
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 160 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKE---------IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ 160 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSS---------CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT
T ss_pred CeEEEEeCCCCCccEEEEEeccc---------ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC
Confidence 999999999887 6666544333 27888 4578999999999999999999998763333222222
Q ss_pred C--CccEEEEE----eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC---CCCEEEEEeCCCcE
Q 016032 160 K--GSKVVGLH----CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP---SGSKILTTSQDNRL 230 (396)
Q Consensus 160 ~--~~~i~~~~----~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i 230 (396)
. ...+.+++ |+| ++.+|++++.|+.|++||+++.+. .....|...|.+++|+| ++.+|++++.||.|
T Consensus 161 ~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp TSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred CCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 1 33788888 678 999999999999999999987543 33346788999999999 99999999999999
Q ss_pred EEEEcccccccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEee-eeeeecccccccceEEEEcCccc-------
Q 016032 231 RIWDSIFGNLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGR-YISENYNGAALHPIDFIDITTGQ------- 301 (396)
Q Consensus 231 ~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~d~~i~vwd~~~~~------- 301 (396)
++||+++++........ ....+ .....+.|+|+ ++ +++ +|+.|+.|++||+.++.
T Consensus 237 ~i~d~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~---------~~~~l~---~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASV----SEKAHKSTVWQVRHLPQ---------NRELFL---TAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp EEEEEEEEETTTEEEEE----EEECCSSCEEEEEEETT---------EEEEEE---EEETTSEEEEEEEECCSCC--CCT
T ss_pred EEEeCcCCCcccceeee----ccCCCcCCEEEEEECCC---------CCcEEE---EEeCCCcEEEeecCCCcccccccC
Confidence 99999987654322110 11122 22347889998 66 677 78999999999997643
Q ss_pred ------------hhhhhcCCCCCCCcceeeeccCCcEEE-eec-CCcEEEEcCCCcce
Q 016032 302 ------------LVAEVMDPNITTISPVNKLHPRDDVLA-SGS-SRSIFIWRPKEKSE 345 (396)
Q Consensus 302 ------------~~~~~~~~~~~~i~~~~~~~~~~~~l~-sg~-d~~i~iw~~~~~~~ 345 (396)
.+..+..|. ..+.++ +|+|++++|+ +|+ |+.|++|++.+.+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~-~~v~~~-~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLST-QPISSL-DWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCS-SCEEEE-EECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCCccccccccceeeccccCC-CCeeEE-EEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 344455554 778888 8999999998 788 99999999988764
No 23
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.8e-41 Score=295.40 Aligned_cols=318 Identities=20% Similarity=0.308 Sum_probs=237.5
Q ss_pred CCCCCccceeeeccccCCeEEEEecC-CCCcEEEEEeCCCcEEEeecccceeeeEec------------CCcccceeEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHP-TNNHILLSGDKKGQVGVWDFYKVSEKIVYG------------NIHSCIVNNIR 71 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------~~~~~~v~~~~ 71 (396)
|.+........+++|.+.|++++|+| ++ .+|++|+.||.|++||+.+........ .+|...|.+++
T Consensus 28 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 28 LGLELNKDRDVERIHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQ 106 (408)
T ss_dssp HTEEECTTEEECCCCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEE
T ss_pred eccccCcceeeeeccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEE
Confidence 34445566778899999999999999 88 689999999999999998865544332 35999999999
Q ss_pred EecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC---CCEEEEEecCCeEEEEeCCCC
Q 016032 72 FNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE---KGVVLVADNFGFLYLVDARTN 148 (396)
Q Consensus 72 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~g~i~i~d~~~~ 148 (396)
|+|+++.+|++++.||.|++||+.+++....+..... +.++.+++. +.++++++.++.|++||++++
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET----------VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC----------EEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc----------eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 9995488999999999999999999988777754322 788888884 459999999999999999987
Q ss_pred CCCccceeeecCCccEEEEEeccCCCC-EEEEeeCCCcEEEEecCCCCCCCc-------------c-ccCCCCCceeEEE
Q 016032 149 SRSGEAILIHRKGSKVVGLHCNPIQPE-LLLSCGNDHFARIWDIRRLEAGSS-------------L-CDLPHKRVVNSAY 213 (396)
Q Consensus 149 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~-------------~-~~~~~~~~i~~~~ 213 (396)
.... ....+...|.+++|+| ++. +|++++.||.|++||+++...... . ....|...|.+++
T Consensus 177 ~~~~---~~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 177 SCSH---ILQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp CCCE---EECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred ceee---eecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 6543 3345666899999999 666 699999999999999986541110 0 0125888999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceE
Q 016032 214 FSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPID 293 (396)
Q Consensus 214 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~ 293 (396)
|+|++.+|++++.||.|++||+.+++........... .........+.... +..++ .++.++.|+
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------~~~~~---~~~~~~~i~ 317 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN----NSKKGLKFTVSCGC--------SSEFV---FVPYGSTIA 317 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCC----CCSSCCCCEECCSS--------SSCEE---EEEETTEEE
T ss_pred EcCCCCEEEEecCCCeEEEEECCCCccceeccccccc----cccccceeEEecCC--------CceEE---EEecCCEEE
Confidence 9999999999999999999999988754322111111 11111111222111 12222 356789999
Q ss_pred EEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccce
Q 016032 294 FIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMK 354 (396)
Q Consensus 294 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~ 354 (396)
+||+.+++.+..+.+|. ..+.++ +|+|++++|++|+ ||.|++|++.+++.+........
T Consensus 318 v~d~~~~~~~~~~~~~~-~~v~~~-~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~ 377 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHY-KTVDCC-VFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT 377 (408)
T ss_dssp EEETTTCCEEEEECCCS-SCEEEE-EEETTTTEEEEEETTSCEEEEEECC------------
T ss_pred EEECcCCcceeeeccCC-CeEEEE-EEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe
Confidence 99999999999988776 788888 8999999999999 99999999999988776554433
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.9e-41 Score=283.70 Aligned_cols=263 Identities=17% Similarity=0.199 Sum_probs=215.0
Q ss_pred CCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeE
Q 016032 61 NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFL 140 (396)
Q Consensus 61 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i 140 (396)
.+|...|.+++|+|+ +.+|++++.||+|++||+.++..+..+..+... +.+++|+|++++|++|+.|+.|
T Consensus 10 ~~h~~~V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPT-EPWVLTTLYSGRVELWNYETQVEVRSIQVTETP---------VRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp EEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSC---------EEEEEEEGGGTEEEEEETTSEE
T ss_pred cCCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCceeEEeeccCCc---------EEEEEEeCCCCEEEEECCCCEE
Confidence 679999999999999 999999999999999999999888777655433 8999999999999999999999
Q ss_pred EEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcC-CC
Q 016032 141 YLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSP-SG 218 (396)
Q Consensus 141 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~-~~ 218 (396)
++||+.+++... ....|...|.+++|+| ++.+|++|+.|++|++||+++... .... .+|...|.+++|+| ++
T Consensus 80 ~vwd~~~~~~~~---~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~ 153 (304)
T 2ynn_A 80 RVFNYNTGEKVV---DFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDP 153 (304)
T ss_dssp EEEETTTCCEEE---EEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEECTTCT
T ss_pred EEEECCCCcEEE---EEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEECCCCC
Confidence 999999876543 3456667899999999 999999999999999999976422 1222 37899999999999 68
Q ss_pred CEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC
Q 016032 219 SKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 219 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
.+|++|+.|+.|++||++++...... .. ........+.|+|... +.+++ +|+.|+.|++||+.
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~-----~~--~~~~~v~~~~~~~~~~-------~~~l~---s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTL-----TT--GQERGVNYVDYYPLPD-------KPYMI---TASDDLTIKIWDYQ 216 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEE-----EC--CCTTCEEEEEECCSTT-------CCEEE---EEETTSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCCcccee-----cc--CCcCcEEEEEEEEcCC-------CCEEE---EEcCCCeEEEEeCC
Confidence 89999999999999999765532110 00 0111122456665321 56666 78999999999999
Q ss_pred ccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccceEEEe
Q 016032 299 TGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMKIIVC 358 (396)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~~~~~ 358 (396)
+++++.++.+|. ..+..+ +|+|++++|++|+ ||.|++||+.+++.+..+..+...+.|
T Consensus 217 ~~~~~~~~~~h~-~~v~~~-~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 217 TKSCVATLEGHM-SNVSFA-VFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp TTEEEEEEECCS-SCEEEE-EECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred CCccceeeCCCC-CCEEEE-EECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 999999998886 677777 8999999999999 999999999999999988876554433
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.2e-40 Score=285.18 Aligned_cols=293 Identities=14% Similarity=0.183 Sum_probs=233.0
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec----CCcccceeEEEEecCCCcEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG----NIHSCIVNNIRFNPTNDGTV 80 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l 80 (396)
|..+.........+|.+.|++++|+|++ ++|++++ ||.|++||+.+......+. ..|...|.+++|+|+ +.+|
T Consensus 36 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 112 (337)
T 1gxr_A 36 PGIPRHARQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD-GCTL 112 (337)
T ss_dssp TTCCSEEEEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT-SSEE
T ss_pred cccCCccccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC-CCEE
Confidence 3444444445556899999999999999 6889888 9999999998754322221 268999999999999 9999
Q ss_pred EEEeCCCeEEEEECCCCcc--cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeee
Q 016032 81 YAASSDGTVSCTDLETGLA--LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIH 158 (396)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~ 158 (396)
++++.|+.|++||+.+++. ...+..+. ..+.+++|+|+++++++++.+|.|++||+++++... ...
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~---~~~ 180 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSA---------PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR---QFQ 180 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSS---------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EEC
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCC---------CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee---eee
Confidence 9999999999999998873 33333222 238999999999999999999999999999865433 334
Q ss_pred cCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 159 RKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
.+...+.+++|+| ++.+|++++.|+.|++||+++.+. +....+...+.+++|+|++++|++++.++.|++||+.++
T Consensus 181 ~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 181 GHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQ---LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred cccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCce---EeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 4566899999999 999999999999999999986543 333457788999999999999999999999999999876
Q ss_pred cccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCccee
Q 016032 239 NLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVN 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 318 (396)
+... . .........+.|+|+ +++++ +++.|+.|++||+.+++.+.... +...+.++
T Consensus 257 ~~~~-------~--~~~~~~v~~~~~~~~---------~~~l~---~~~~dg~i~~~~~~~~~~~~~~~--~~~~v~~~- 312 (337)
T 1gxr_A 257 DKYQ-------L--HLHESCVLSLKFAYC---------GKWFV---STGKDNLLNAWRTPYGASIFQSK--ESSSVLSC- 312 (337)
T ss_dssp CEEE-------E--CCCSSCEEEEEECTT---------SSEEE---EEETTSEEEEEETTTCCEEEEEE--CSSCEEEE-
T ss_pred CeEE-------E--cCCccceeEEEECCC---------CCEEE---EecCCCcEEEEECCCCeEEEEec--CCCcEEEE-
Confidence 5421 1 111122357889998 77777 78899999999999988774432 33677777
Q ss_pred eeccCCcEEEeec-CCcEEEEcC
Q 016032 319 KLHPRDDVLASGS-SRSIFIWRP 340 (396)
Q Consensus 319 ~~~~~~~~l~sg~-d~~i~iw~~ 340 (396)
+|+|++++|++++ ||.|++|++
T Consensus 313 ~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 313 DISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECTTSCEEEEEETTSCEEEEEE
T ss_pred EECCCCCEEEEecCCCeEEEEEE
Confidence 8999999999998 999999996
No 26
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-40 Score=291.15 Aligned_cols=298 Identities=11% Similarity=0.109 Sum_probs=232.8
Q ss_pred eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEE
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
.+..|.++|++++|+|++ ++|++|+.|+.|++||+.++. ....+ .+|...|.+++|+|+ +.+|++++.||.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 456699999999999999 689999999999999999876 55555 579999999999999 9999999999999999
Q ss_pred ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcccee-eecCCccEEEEEecc
Q 016032 93 DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAIL-IHRKGSKVVGLHCNP 171 (396)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 171 (396)
|+.+++....+..... ...+.+++|+|++++|++++.++.|++||+........... ...+...|.+++|+|
T Consensus 80 d~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRI-------NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp EEETTEEEEEEECCCC-------SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred ECCCCeeeeeEEeecC-------CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 9988875544432211 12399999999999999999999999999988653221212 234566899999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCC---------------CCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 172 IQPELLLSCGNDHFARIWDIRRL---------------EAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~---------------~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
++.+|++++.|+.|++||++.. .....+..+ .|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 153 -~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 153 -NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp -TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred -CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 9999999999999999997521 112233333 68889999999999999999999999999999
Q ss_pred ccccccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc--cc--h--------
Q 016032 236 IFGNLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT--GQ--L-------- 302 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~--~~--~-------- 302 (396)
++++..... ..+. ....+.|+|+ +++++ +| .|+.|++|++.+ ++ .
T Consensus 232 ~~~~~~~~~---------~~~~~~v~~~~~~~~---------~~~l~---~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 289 (372)
T 1k8k_C 232 DKKMAVATL---------ASETLPLLAVTFITE---------SSLVA---AG-HDCFPVLFTYDSAAGKLSFGGRLDVPK 289 (372)
T ss_dssp GGTTEEEEE---------ECSSCCEEEEEEEET---------TEEEE---EE-TTSSCEEEEEETTTTEEEECCCCCCC-
T ss_pred CCCceeEEE---------ccCCCCeEEEEEecC---------CCEEE---EE-eCCeEEEEEccCcCceEEEeeccCccc
Confidence 987653211 1112 2347888887 77777 55 899999999987 42 0
Q ss_pred ----------------------h------hhhcCCCCCCCcceeeec-cCC---cEEEeec-CCcEEEEcCCCccee
Q 016032 303 ----------------------V------AEVMDPNITTISPVNKLH-PRD---DVLASGS-SRSIFIWRPKEKSEL 346 (396)
Q Consensus 303 ----------------------~------~~~~~~~~~~i~~~~~~~-~~~---~~l~sg~-d~~i~iw~~~~~~~~ 346 (396)
. ..+...+...|.++ +|+ ++| .+|++|+ ||.|++|++.+++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 290 QSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQI-SVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp -------CHHHHHHHCCCCC---------CCCSSSSSSCEEEE-EEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred cchhhhcchhhhhhhcccccccccCccccccccccccCCccee-EEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 0 22332344788888 655 777 9999999 999999999876543
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.6e-40 Score=303.38 Aligned_cols=282 Identities=21% Similarity=0.349 Sum_probs=232.1
Q ss_pred ccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 10 QVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 10 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
...+..+.+|...|++++|+|++ .+|++++.|+.|++||....... .+ .+|...|.+++|+|+ +.+|++++.|+.|
T Consensus 293 ~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~~~~-~~-~~~~~~v~~~~~s~~-g~~l~~~~~dg~v 368 (577)
T 2ymu_A 293 GQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQHLQ-TL-TGHSSSVWGVAFSPD-GQTIASASDDKTV 368 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSCEEE-EE-CCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred CcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeeE-EE-eCCCCCEEEEEECCC-CCEEEEEeCCCEE
Confidence 44567889999999999999999 68999999999999998765443 33 679999999999999 9999999999999
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEe
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC 169 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (396)
++|+. +++.+..+..+.. .|.+++|+|++++|++++.|+.|++||... +. ......+...|.+++|
T Consensus 369 ~~~~~-~~~~~~~~~~~~~---------~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-~~---~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 369 KLWNR-NGQLLQTLTGHSS---------SVRGVAFSPDGQTIASASDDKTVKLWNRNG-QL---LQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEEET-TCCEEEEEECCSS---------CEEEEEECTTSSCEEEEETTSEEEEECTTC-CE---EEEEECCSSCEEEEEE
T ss_pred EEEcC-CCCEEEEecCCCC---------CeEEEEECCCCCEEEEEeCCCEEEEEeCCC-CE---EEEecCCCCCeEEEEE
Confidence 99995 4566555544332 299999999999999999999999999643 22 2234556668999999
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
+| ++.+|++++.|+.|++||... ..+.. .+|...|.+++|+|++++|++++.|+.|++||.. +++..
T Consensus 435 s~-d~~~l~~~~~d~~v~~w~~~~----~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~------ 502 (577)
T 2ymu_A 435 SP-DDQTIASASDDKTVKLWNRNG----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQ------ 502 (577)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTS----CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEE------
T ss_pred CC-CCCEEEEEcCCCEEEEEECCC----CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEE------
Confidence 99 999999999999999999742 22222 3789999999999999999999999999999963 44322
Q ss_pred ecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEE
Q 016032 249 HSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVL 327 (396)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 327 (396)
.+..+. ....++|+|+ |++++ +++.|+.|++||. +++++..+.+|. ..|.++ +|+|+|++|
T Consensus 503 ---~~~~h~~~v~~l~~s~d---------g~~l~---s~~~dg~v~lwd~-~~~~~~~~~~h~-~~v~~~-~fs~dg~~l 564 (577)
T 2ymu_A 503 ---TLTGHSSSVRGVAFSPD---------GQTIA---SASDDKTVKLWNR-NGQLLQTLTGHS-SSVWGV-AFSPDGQTI 564 (577)
T ss_dssp ---EEECCSSCEEEEEECTT---------SSCEE---EEETTSEEEEECT-TSCEEEEEECCS-SCEEEE-EECTTSSCE
T ss_pred ---EEeCCCCCEEEEEEcCC---------CCEEE---EEECcCEEEEEeC-CCCEEEEEcCCC-CCEEEE-EEcCCCCEE
Confidence 112222 2347889998 78888 7899999999996 688888888876 788888 899999999
Q ss_pred Eeec-CCcEEEEc
Q 016032 328 ASGS-SRSIFIWR 339 (396)
Q Consensus 328 ~sg~-d~~i~iw~ 339 (396)
++++ |+.|++||
T Consensus 565 ~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 565 ASASSDKTVKLWN 577 (577)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEeCCCEEEEeC
Confidence 9999 99999997
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-39 Score=301.01 Aligned_cols=301 Identities=19% Similarity=0.304 Sum_probs=244.2
Q ss_pred CccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCe
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 88 (396)
+...+..+.+|...|.+++|+|++ ++|++++.|+.|++|+... +....+ .+|...|.+++|+|+ +..|++++.|+.
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~-~~~~~~-~~h~~~v~~~~~~~~-~~~l~t~~~d~~ 326 (577)
T 2ymu_A 251 NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNG-QLLQTL-TGHSSSVWGVAFSPD-GQTIASASDDKT 326 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTS-CEEEEE-CCCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCC-cEEEEE-ecCCCCeEEEEECCC-CCEEEEEeCCCe
Confidence 345677899999999999999999 6899999999999999754 334444 679999999999999 999999999999
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
|++||+.... +..+..+. ..+.+++|+|++.++++++.++.|++||... +. ......+...|.+++
T Consensus 327 i~~w~~~~~~-~~~~~~~~---------~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~---~~~~~~~~~~v~~~~ 392 (577)
T 2ymu_A 327 VKLWNRNGQH-LQTLTGHS---------SSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QL---LQTLTGHSSSVRGVA 392 (577)
T ss_dssp EEEEETTSCE-EEEECCCS---------SCEEEEEECTTSSEEEEEETTSEEEEEETTC-CE---EEEEECCSSCEEEEE
T ss_pred EEEEeCCCCe-eEEEeCCC---------CCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CE---EEEecCCCCCeEEEE
Confidence 9999986543 33333222 2389999999999999999999999999643 22 223445666899999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcce
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 247 (396)
|+| ++.+|++++.|+.|++||... ..+..+ +|...|++++|+|++++|++++.|+.|++||... +...
T Consensus 393 ~s~-dg~~l~~~~~d~~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~----- 461 (577)
T 2ymu_A 393 FSP-DGQTIASASDDKTVKLWNRNG----QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQ----- 461 (577)
T ss_dssp ECT-TSSCEEEEETTSEEEEECTTC----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEE-----
T ss_pred ECC-CCCEEEEEeCCCEEEEEeCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEE-----
Confidence 999 999999999999999999632 223222 6899999999999999999999999999999743 3211
Q ss_pred eecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcE
Q 016032 248 VHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDV 326 (396)
Q Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 326 (396)
.+..+. ....++|+|+ |++++ +++.|+.|++||. +++++..+.+|. ..+.++ +|+|++++
T Consensus 462 ----~~~~~~~~v~~~~~spd---------~~~la---s~~~d~~i~iw~~-~~~~~~~~~~h~-~~v~~l-~~s~dg~~ 522 (577)
T 2ymu_A 462 ----TLTGHSSSVRGVAFSPD---------GQTIA---SASDDKTVKLWNR-NGQLLQTLTGHS-SSVRGV-AFSPDGQT 522 (577)
T ss_dssp ----EEECCSSCEEEEEECTT---------SCEEE---EEETTSEEEEEET-TSCEEEEEECCS-SCEEEE-EECTTSSC
T ss_pred ----EEcCCCCCEEEEEEcCC---------CCEEE---EEeCCCEEEEEcC-CCCEEEEEeCCC-CCEEEE-EEcCCCCE
Confidence 111122 2346899998 77888 7899999999995 688888888876 778888 89999999
Q ss_pred EEeec-CCcEEEEcCCCcceeeeccccceEEEe
Q 016032 327 LASGS-SRSIFIWRPKEKSELVEQKEEMKIIVC 358 (396)
Q Consensus 327 l~sg~-d~~i~iw~~~~~~~~~~~~~~~~~~~~ 358 (396)
|++++ |+.|+|||. +++.+..+.+|...+.+
T Consensus 523 l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~ 554 (577)
T 2ymu_A 523 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 554 (577)
T ss_dssp EEEEETTSEEEEECT-TSCEEEEEECCSSCEEE
T ss_pred EEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEE
Confidence 99999 999999995 68889999988876654
No 29
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.5e-41 Score=294.85 Aligned_cols=311 Identities=12% Similarity=0.138 Sum_probs=236.8
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce------eeeEecCCcccceeEEEEecC---CC---c
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS------EKIVYGNIHSCIVNNIRFNPT---ND---G 78 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~---~~---~ 78 (396)
.....+.+|.+.|++++|+| .+|++|+.||.|++|++.+.. ....+ .+|...|.+++|+|+ ++ .
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCcEEEEEEecccccCCcccc
Confidence 34567899999999999998 379999999999999999876 45555 579999999999986 35 7
Q ss_pred EEEEEeCCCeEEEEECCCCcc-----cceeecCCCCCCCCCcceeeeEEEeC----CCCCE-EEEEecCCeEEEEeCCC-
Q 016032 79 TVYAASSDGTVSCTDLETGLA-----LSLMNVNPNGWHGPRTWRMLYGMDIN----PEKGV-VLVADNFGFLYLVDART- 147 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~-l~~~~~~g~i~i~d~~~- 147 (396)
+|++++.||.|++|++.+++. ...+..+.. +.....|.+++|+ |++.+ |++++.+|.|++||+..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS----DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT----TGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeeccccc----ccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 999999999999999998876 555543320 0001339999999 99999 99999999999999988
Q ss_pred -----CCCCcc----ceee-----ecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCC---CCce
Q 016032 148 -----NSRSGE----AILI-----HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPH---KRVV 209 (396)
Q Consensus 148 -----~~~~~~----~~~~-----~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~---~~~i 209 (396)
.....- .+.. ..+...+.+++|+| ++ +|++++.|+.|++||+++.+....+.. ..| ...|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 544430 1111 34566899999999 88 999999999999999987544333321 016 8899
Q ss_pred eEEEEcCCCCEEEEEeCC---CcEEEEEcccccccCCCcceee-----cccccccCCceeEEeCCCCCCCceeeEeeeee
Q 016032 210 NSAYFSPSGSKILTTSQD---NRLRIWDSIFGNLDSPSREIVH-----SHDFNRHLTPFRAEWDPKDPSESLAVIGRYIS 281 (396)
Q Consensus 210 ~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 281 (396)
.+++|+|++.+|++++.| +.|++||+++++.......... ...+........+.|+|+ +++++
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~l~ 307 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS---------GETLC 307 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS---------SSEEE
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC---------CCEEE
Confidence 999999999999999999 9999999998765332111000 000001223457899997 77777
Q ss_pred eecccccccceEEEEcCccchhhhhc------CC--------------CCCCCcceeeeccCC----------cEEEeec
Q 016032 282 ENYNGAALHPIDFIDITTGQLVAEVM------DP--------------NITTISPVNKLHPRD----------DVLASGS 331 (396)
Q Consensus 282 ~~~~g~~d~~i~vwd~~~~~~~~~~~------~~--------------~~~~i~~~~~~~~~~----------~~l~sg~ 331 (396)
+++.|+.|++||+.+++.+..+. .| +...+.++ +|+|++ ++|++|+
T Consensus 308 ---~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~~~~l~s~~ 383 (397)
T 1sq9_A 308 ---SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV-KFLKKGWRSGMGADLNESLCCVC 383 (397)
T ss_dssp ---EEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE-EEECTTTSBSTTCTTSCEEEEEE
T ss_pred ---EEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE-EeccccccccccccccceEEEec
Confidence 78899999999999999988887 55 14778888 899998 7999998
Q ss_pred -CCcEEEEcCCCcc
Q 016032 332 -SRSIFIWRPKEKS 344 (396)
Q Consensus 332 -d~~i~iw~~~~~~ 344 (396)
||.|++|++.+|+
T Consensus 384 ~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 384 LDRSIRWFREAGGK 397 (397)
T ss_dssp TTTEEEEEEEEC--
T ss_pred CCCcEEEEEcCCCC
Confidence 9999999998764
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-40 Score=293.17 Aligned_cols=294 Identities=13% Similarity=0.168 Sum_probs=226.4
Q ss_pred cccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc---c-eeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEE
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK---V-SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 93 (396)
.|...|++++|+|++ .+|++|+.||.|++||+.+ + .....+ .+|...|.+++|+|+++.+|++++.|+.|++||
T Consensus 65 ~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred ecCCceEEEEECCCC-CeEEEEccCCeEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 589999999999999 6899999999999999987 2 234444 789999999999997678999999999999999
Q ss_pred CCCCc------ccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCCccceeee---cCCcc
Q 016032 94 LETGL------ALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRSGEAILIH---RKGSK 163 (396)
Q Consensus 94 ~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~---~~~~~ 163 (396)
+.+++ ....+. ... .+...+.+++|+|+ +.++++++.+|.|++||++++.......... .+...
T Consensus 143 ~~~~~~~~~~~~~~~~~----~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPG----QSM--SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp TTTTSSCTTTCCCBCCC----CSC--CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred CCCCccccccccccccc----ccc--CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence 99876 222211 001 11234999999999 7899999999999999999866543221111 11568
Q ss_pred EEEEEeccCCCCEEEEeeCCC---cEEEEecCCCCCCCccccC--CCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEccc
Q 016032 164 VVGLHCNPIQPELLLSCGNDH---FARIWDIRRLEAGSSLCDL--PHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 164 i~~~~~~~~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~ 237 (396)
+.+++|+|....++++++.|+ .|++||+++... .+..+ +|...|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 999999993347999999998 999999987532 22222 5889999999999 999999999999999999998
Q ss_pred ccccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEe-eeeeeecccccccceEEEEcCccchhhhhcC-------
Q 016032 238 GNLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIG-RYISENYNGAALHPIDFIDITTGQLVAEVMD------- 308 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~------- 308 (396)
++.+... ..+ .....+.|+|+ + .+++ +++.|+.|++|++.++........
T Consensus 295 ~~~~~~~---------~~~~~~v~~~~~s~~---------~~~~l~---s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 295 AEQLSQF---------PARGNWCFKTKFAPE---------APDLFA---CASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp CCEEEEE---------ECSSSCCCCEEECTT---------CTTEEE---ECCSSSEEEEEESCCCCCSSCC---------
T ss_pred Cccceee---------cCCCCceEEEEECCC---------CCCEEE---EEecCCcEEEEEccCCCCCcccccccccccC
Confidence 7653211 111 12347899998 5 5666 789999999999987764433211
Q ss_pred -------C--------------------CCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCc
Q 016032 309 -------P--------------------NITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 309 -------~--------------------~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~ 343 (396)
+ +...+..+ +|+|+|++|++|+ |+.|+||++.+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAA-HWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCC-EEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccce-EEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 0 23455566 8999999999999 999999999865
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=279.45 Aligned_cols=251 Identities=19% Similarity=0.202 Sum_probs=199.0
Q ss_pred eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEe---cCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY---GNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
....|...|.+++|+|++ .|++|+.||+|+|||+.+++..... ..+|...|++++|+|+ +.+|++|+.|++|++
T Consensus 77 ~~~~~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVGER--GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKV 153 (344)
T ss_dssp EEEEESSCEEEEEEETTT--EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEE
T ss_pred eeeccCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEE
Confidence 344577889999999986 4889999999999999987654332 2579999999999999 999999999999999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEec
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCN 170 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 170 (396)
||+.+++.+..+..+... |.+++|++++ .+|++++.|+.|++||+++++....+ ....+...+.+++|+
T Consensus 154 wd~~~~~~~~~~~~h~~~---------V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQ---------VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWH 223 (344)
T ss_dssp EETTTTEEEEEECCCSSC---------EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEEC
T ss_pred EECCCCcEEEEEcCcCCc---------eEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeec
Confidence 999999988887654433 9999999987 57889999999999999987765433 233445579999999
Q ss_pred cCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCC-CEEEEEeCCCcEEEEEcccccccCCCcceee
Q 016032 171 PIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSG-SKILTTSQDNRLRIWDSIFGNLDSPSREIVH 249 (396)
Q Consensus 171 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 249 (396)
|.++.+|++|+.|+.|++||+++.+....+ .+|...|++++|+|++ ++|++|+.|++|++||+.++++..
T Consensus 224 p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~------- 294 (344)
T 4gqb_B 224 PQQSEVFVFGDENGTVSLVDTKSTSCVLSS--AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR------- 294 (344)
T ss_dssp SSCTTEEEEEETTSEEEEEESCC--CCEEE--ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-------
T ss_pred CCCCcceEEeccCCcEEEEECCCCcEEEEE--cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-------
Confidence 966789999999999999999876554333 2699999999999987 579999999999999998876532
Q ss_pred cccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 250 SHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
..+|.. ...++|+|+. ..+++ +++.|++|++|++.+..
T Consensus 295 ---~~~H~~~V~~v~~sp~~--------~~lla---s~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 295 ---SQAHRDFVRDATWSPLN--------HSLLT---TVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ---ECCCSSCEEEEEECSSS--------TTEEE---EEETTSCEEEEECCC--
T ss_pred ---EcCCCCCEEEEEEeCCC--------CeEEE---EEcCCCeEEEEECCCCC
Confidence 122222 3578999983 22444 68899999999997654
No 32
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-39 Score=283.28 Aligned_cols=306 Identities=13% Similarity=0.159 Sum_probs=228.0
Q ss_pred eeeccccCCeEEEEecCC---CCcEEEEEeCCCcEEEeecccceeeeEec----CCcccceeEEEEecCC---CcEEEEE
Q 016032 14 AVIRYHSRRVTCLEFHPT---NNHILLSGDKKGQVGVWDFYKVSEKIVYG----NIHSCIVNNIRFNPTN---DGTVYAA 83 (396)
Q Consensus 14 ~~~~~h~~~v~~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~---~~~l~s~ 83 (396)
....+|.++|++++|+|+ +..++++++.++.|++||+.++.....+. ..|...|.+++|+|+. +.+|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345689999999999984 43566667777899999999766554432 2366889999999983 3589999
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS 162 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 162 (396)
+.||.|++||+.+++.+..+..+... |.+++|+| ++.+|++++.||.|++||+++++..........+..
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNA---------INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSC---------EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred cCCCEEEEEEchhceEeeeecCCCCc---------EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 99999999999999888877644433 99999999 899999999999999999998754432211245667
Q ss_pred cEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccc--------------------------cCCCCCceeEEEEcC
Q 016032 163 KVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLC--------------------------DLPHKRVVNSAYFSP 216 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------------------------~~~~~~~i~~~~~~~ 216 (396)
.|.+++|+| ++.+|++++.|+.|++||+++.+....+. ...|...|.+++|+
T Consensus 163 ~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 163 EVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred ceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 899999999 99999999999999999998643221111 01288899999998
Q ss_pred CCCEEEEEeCCCcEEEEEcccccccCCC----c-ceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeeccccccc
Q 016032 217 SGSKILTTSQDNRLRIWDSIFGNLDSPS----R-EIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALH 290 (396)
Q Consensus 217 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~ 290 (396)
+.+|++++.|+.|++||+.++...... . .......+..+. ....+.|+|+.. |++++ +|+.|+
T Consensus 241 -~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~~~l~---~~~~dg 309 (366)
T 3k26_A 241 -GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW-------QKMLA---LGNQVG 309 (366)
T ss_dssp -TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT-------SSEEE---EECTTS
T ss_pred -CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC-------CcEEE---EEecCC
Confidence 779999999999999999876541100 0 000001111111 112333444311 66777 789999
Q ss_pred ceEEEEcCccchhh----hhcCCC-CCCCcceeeeccCCcEEEeec-CCcEEEEcCCC
Q 016032 291 PIDFIDITTGQLVA----EVMDPN-ITTISPVNKLHPRDDVLASGS-SRSIFIWRPKE 342 (396)
Q Consensus 291 ~i~vwd~~~~~~~~----~~~~~~-~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~ 342 (396)
.|++||+.+++... .+..|. ...+.++ +|+|++++|++|+ ||.|++||+.+
T Consensus 310 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 310 KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQT-SFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CEEEEECCSSSGGGCEEEEECCTTCCSCEEEE-EECTTSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEECCCCCCccccceEEcccccCCceEEE-EeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999987655 555552 4778888 8999999999999 99999999853
No 33
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.4e-40 Score=289.29 Aligned_cols=255 Identities=17% Similarity=0.242 Sum_probs=215.9
Q ss_pred CCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 4 AHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.|++.++.....+++|.+.|++++|+|++ .+|++|+.|++|+|||+.+......+ .+|...|.+++|+|+ +.+|+++
T Consensus 134 vwd~~~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~~V~~v~~~p~-~~~l~s~ 210 (410)
T 1vyh_C 134 VWDYETGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVSIMPN-GDHIVSA 210 (410)
T ss_dssp EEETTTCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSCEEECC-CCCSSCEEEEEECSS-SSEEEEE
T ss_pred EEECCCCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEE-cCCCCCEEEEEEeCC-CCEEEEE
Confidence 37778888889999999999999999998 68999999999999999988777666 789999999999999 9999999
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCcc
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSK 163 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 163 (396)
+.|++|++||+.++.++..+..+... +.++.++|++.++++++.|+.|++||+.++.... ....+...
T Consensus 211 s~D~~i~~wd~~~~~~~~~~~~h~~~---------v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~---~~~~h~~~ 278 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKTFTGHREW---------VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---ELREHRHV 278 (410)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSC---------EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSC
T ss_pred eCCCeEEEEECCCCcEEEEEeCCCcc---------EEEEEECCCCCEEEEEcCCCeEEEEECCCCceee---EecCCCce
Confidence 99999999999999988877654432 8999999999999999999999999998865443 33456668
Q ss_pred EEEEEeccCC--------------------CCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE
Q 016032 164 VVGLHCNPIQ--------------------PELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 164 i~~~~~~~~~--------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
|.+++|+| + +.+|++|+.|+.|++||++++.....+ .+|...|.+++|+|++.+|++
T Consensus 279 v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~--~~h~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 279 VECISWAP-ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp EEEEEECC-SCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEECSSSSCEEE
T ss_pred EEEEEEcC-cccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE--ECCCCcEEEEEEcCCCCEEEE
Confidence 99999998 4 568999999999999999875543222 268999999999999999999
Q ss_pred EeCCCcEEEEEcccccccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEc
Q 016032 224 TSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDI 297 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~ 297 (396)
|+.|+.|++||+.++++... +..+. ....+.|+|+ +.+++ +|+.|+.|++|++
T Consensus 356 ~s~D~~i~vwd~~~~~~~~~---------~~~h~~~v~~l~~~~~---------~~~l~---sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 356 CADDKTLRVWDYKNKRCMKT---------LNAHEHFVTSLDFHKT---------APYVV---TGSVDQTVKVWEC 409 (410)
T ss_dssp EETTTEEEEECCTTSCCCEE---------EECCSSCEEEEEECSS---------SSCEE---EEETTSEEEEEC-
T ss_pred EeCCCeEEEEECCCCceEEE---------EcCCCCcEEEEEEcCC---------CCEEE---EEeCCCcEEEEeC
Confidence 99999999999988765432 11222 2357899998 67777 8999999999986
No 34
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-40 Score=293.99 Aligned_cols=313 Identities=16% Similarity=0.190 Sum_probs=229.1
Q ss_pred CCCCCccceeee-ccccCCeEEEEecC-CCCcEEEEEeCCCcEEEeeccc---ce---eeeEecCCcccceeEEEEecCC
Q 016032 5 HVIPDQVNCAVI-RYHSRRVTCLEFHP-TNNHILLSGDKKGQVGVWDFYK---VS---EKIVYGNIHSCIVNNIRFNPTN 76 (396)
Q Consensus 5 ~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~---~~---~~~~~~~~~~~~v~~~~~~~~~ 76 (396)
|. +.+..+..+ .+|.+.|++++|+| ++ .+|++|+.||.|+|||+.+ +. ....+ .|...|.+++|+|+
T Consensus 48 w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~- 122 (437)
T 3gre_A 48 GN-LRGKLIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPN- 122 (437)
T ss_dssp GG-CCCCEEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTT-
T ss_pred cc-ccceEEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCC-
Confidence 44 455667788 99999999999999 88 6899999999999999987 33 22222 49999999999998
Q ss_pred CcEEEEEeCCCeEEEEECC---CCcccceeecCCC---CCCCCCcceeeeEEE--eCCCCCEEEEEecCCeEEEEeCCCC
Q 016032 77 DGTVYAASSDGTVSCTDLE---TGLALSLMNVNPN---GWHGPRTWRMLYGMD--INPEKGVVLVADNFGFLYLVDARTN 148 (396)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~~~---~~~~~~~~~~v~~~~--~~~~~~~l~~~~~~g~i~i~d~~~~ 148 (396)
+.+|++++.||.|++||+. +++.......+.. .+........+.++. +++++.++++++.++.|++||++++
T Consensus 123 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 123 FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 9999999999999999995 4444333221100 000000112255555 6788999999999999999999987
Q ss_pred CCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC----CCCEEEEE
Q 016032 149 SRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP----SGSKILTT 224 (396)
Q Consensus 149 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~ 224 (396)
+..... ..+.+...|.+++|+| ++.+|++|+.||.|++||+++.+....+. ..|...|.+++|+| ++.+|+++
T Consensus 203 ~~~~~~-~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 203 ERLQII-ENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWS-FGDHAPITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp CEEEEE-ECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEB-CTTCEEEEEEEECTTTCTTEEEEEEE
T ss_pred eeeEEE-ccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEe-cCCCCceEEEEeccccCCCccEEEEE
Confidence 654332 2222556899999999 89999999999999999998754433222 25777999996665 67799999
Q ss_pred eCCCcEEEEEcccccccCCCcce---eecc------------cccc--cC-CceeEEeCCCCCCCceeeEeeeeeeeccc
Q 016032 225 SQDNRLRIWDSIFGNLDSPSREI---VHSH------------DFNR--HL-TPFRAEWDPKDPSESLAVIGRYISENYNG 286 (396)
Q Consensus 225 ~~d~~i~iwd~~~~~~~~~~~~~---~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 286 (396)
+.||.|++||+++++........ .... .+.+ +. ....++|+ + +++++ +|
T Consensus 280 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~---------~~~l~---s~ 346 (437)
T 3gre_A 280 SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N---------DKILL---TD 346 (437)
T ss_dssp STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T---------TEEEE---EE
T ss_pred cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C---------ceEEE---ec
Confidence 99999999999988753321100 0000 0000 11 11234454 2 56677 79
Q ss_pred ccccceEEEEcCccchhhhhcCC------------------------------------CCCCCcceeeeccC--CcEEE
Q 016032 287 AALHPIDFIDITTGQLVAEVMDP------------------------------------NITTISPVNKLHPR--DDVLA 328 (396)
Q Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~------------------------------------~~~~i~~~~~~~~~--~~~l~ 328 (396)
+.|+.|++||+.+++....+.++ +...|.++ +|+++ +.+|+
T Consensus 347 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i-~~~~~~~~~~l~ 425 (437)
T 3gre_A 347 EATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSI-STCEVDETPLLV 425 (437)
T ss_dssp GGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEE-EEEESSSSEEEE
T ss_pred CCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeE-eeeccCCceEEE
Confidence 99999999999999988877764 45778887 78888 88999
Q ss_pred eec-CCcEEEEc
Q 016032 329 SGS-SRSIFIWR 339 (396)
Q Consensus 329 sg~-d~~i~iw~ 339 (396)
+|+ ||.|+||+
T Consensus 426 s~~~dG~I~iw~ 437 (437)
T 3gre_A 426 ACDNSGLIGIFQ 437 (437)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCceEEEeC
Confidence 999 99999995
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=290.10 Aligned_cols=302 Identities=14% Similarity=0.134 Sum_probs=231.2
Q ss_pred CCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeec----ccce------eeeEecC---------Ccc
Q 016032 4 AHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDF----YKVS------EKIVYGN---------IHS 64 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~----~~~~------~~~~~~~---------~~~ 64 (396)
.|.............|.+.|++++|+|++..+|++|+.||.|++|++ .++. ....+.. +|.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (425)
T 1r5m_A 29 SDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT 108 (425)
T ss_dssp -----CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C
T ss_pred cccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC
Confidence 34444444333444566999999999999438999999999999999 7766 2333321 267
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEe
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVD 144 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d 144 (396)
..|.+++|+|+ +.+|++++.||.|++|| .+++....+..+.. .+.+++|+|++++|++++.++.|++||
T Consensus 109 ~~v~~~~~s~~-~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 109 NQVTCLAWSHD-GNSIVTGVENGELRLWN-KTGALLNVLNFHRA---------PIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp BCEEEEEECTT-SSEEEEEETTSCEEEEE-TTSCEEEEECCCCS---------CEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CceEEEEEcCC-CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc---------cEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 79999999999 99999999999999999 55666666644332 399999999999999999999999999
Q ss_pred CCCCCCCccc-----------------------------------------------------eeeecCCccEEEEEecc
Q 016032 145 ARTNSRSGEA-----------------------------------------------------ILIHRKGSKVVGLHCNP 171 (396)
Q Consensus 145 ~~~~~~~~~~-----------------------------------------------------~~~~~~~~~i~~~~~~~ 171 (396)
+.++...... .....+...+.+++|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 9765432110 11223556899999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecc
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSH 251 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 251 (396)
++.+|++++.|+.|++||+++.+....+ ..|...|.+++|+|++ +|++++.|+.|++||+++++......
T Consensus 258 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~------ 327 (425)
T 1r5m_A 258 -TNKLLLSASDDGTLRIWHGGNGNSQNCF--YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI------ 327 (425)
T ss_dssp -TTTEEEEEETTSCEEEECSSSBSCSEEE--CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE------
T ss_pred -CCCEEEEEcCCCEEEEEECCCCccceEe--cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc------
Confidence 8999999999999999999875543333 2588899999999999 99999999999999998876532111
Q ss_pred cccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc--------------------hhhhhcCCCC
Q 016032 252 DFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ--------------------LVAEVMDPNI 311 (396)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~--------------------~~~~~~~~~~ 311 (396)
........+.|+|+ |++++ +++.|+.|++||+.+++ .+..+..+..
T Consensus 328 --~~~~~i~~~~~s~~---------~~~l~---~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (425)
T 1r5m_A 328 --VDGVPIFAGRISQD---------GQKYA---VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD 393 (425)
T ss_dssp --CTTCCEEEEEECTT---------SSEEE---EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTC
T ss_pred --cCCccEEEEEEcCC---------CCEEE---EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence 01123347889998 77777 78899999999999888 7777877764
Q ss_pred C-CCcceeeeccCCcEEEeec-CCcEEEEcCC
Q 016032 312 T-TISPVNKLHPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 312 ~-~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
. .+..+ +|+|++++|++++ ||.|++|++.
T Consensus 394 ~~~v~~~-~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 394 NDYIFDL-SWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCEEEE-EECTTSSEEEEEESSSCCEEEECC
T ss_pred CCceEEE-EccCCCceEEEEecCceEEEEeec
Confidence 4 88888 8999999999998 9999999985
No 36
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-39 Score=273.61 Aligned_cols=296 Identities=14% Similarity=0.153 Sum_probs=231.3
Q ss_pred CccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCe
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 88 (396)
.....+.+.+|.+.|++++| |++ .+|++|+.||.|++||+.+......+ ..|...|.+++|+|+ +.+|++++.||.
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~dg~ 82 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQWLGTVV-YTGQGFLNSVCYDSE-KELLLFGGKDTM 82 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSEEEEEE-EECSSCEEEEEEETT-TTEEEEEETTSC
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCEEEEEe-ecCCccEEEEEECCC-CCEEEEecCCCe
Confidence 34567889999999999999 888 58999999999999999887766666 579999999999999 999999999999
Q ss_pred EEEEECCCCc---ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 89 VSCTDLETGL---ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 89 v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
|++|++.... ....+..+. ..+.+++| +++++++++.+|.|++||.. . .......+...+.
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~--~~~~l~~~~~d~~i~~~d~~--~---~~~~~~~~~~~v~ 146 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQ---------GNVCSLSF--QDGVVISGSWDKTAKVWKEG--S---LVYNLQAHNASVW 146 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCS---------SCEEEEEE--ETTEEEEEETTSEEEEEETT--E---EEEEEECCSSCEE
T ss_pred EEEEEeeecCCCCcccchhhcc---------cCEEEEEe--cCCEEEEEeCCCCEEEEcCC--c---EEEecccCCCcee
Confidence 9999987653 233332222 23889998 67899999999999999922 1 2223445666899
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
++++.|.+++++++++.|+.|++||... .. ......|...|.+++|+|++. +++++.||.|++||+++++.....
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~- 221 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQNDK--VI-KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY- 221 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTE--EE-EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-
T ss_pred EEEEccCCCCEEEEEECCCCEEEEecCc--eE-EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-
Confidence 9999887889999999999999999532 11 111123888999999999998 999999999999999987653211
Q ss_pred ceeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCC
Q 016032 246 EIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRD 324 (396)
Q Consensus 246 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 324 (396)
..+ .....+.|+|+ |. ++ +++.|+.|++||+.+++.+..+..+. ..+.++ +|+|++
T Consensus 222 --------~~~~~~i~~~~~~~~---------~~-l~---~~~~dg~v~iwd~~~~~~~~~~~~~~-~~i~~~-~~~~~~ 278 (313)
T 3odt_A 222 --------EGHESFVYCIKLLPN---------GD-IV---SCGEDRTVRIWSKENGSLKQVITLPA-ISIWSV-DCMSNG 278 (313)
T ss_dssp --------ECCSSCEEEEEECTT---------SC-EE---EEETTSEEEEECTTTCCEEEEEECSS-SCEEEE-EECTTS
T ss_pred --------hcCCceEEEEEEecC---------CC-EE---EEecCCEEEEEECCCCceeEEEeccC-ceEEEE-EEccCC
Confidence 112 22357889997 53 33 57899999999999999988887775 678888 899999
Q ss_pred cEEEeecCCcEEEEcCCCcceeeecccc
Q 016032 325 DVLASGSSRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 325 ~~l~sg~d~~i~iw~~~~~~~~~~~~~~ 352 (396)
++++++.||.|++|++.+++.+......
T Consensus 279 ~~~~~~~dg~i~iw~~~~~~~~~~~~~~ 306 (313)
T 3odt_A 279 DIIVGSSDNLVRIFSQEKSRWASEDEIK 306 (313)
T ss_dssp CEEEEETTSCEEEEESCGGGCCC-----
T ss_pred CEEEEeCCCcEEEEeCCCCceeehhhhh
Confidence 9665444999999999998876655443
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-40 Score=290.01 Aligned_cols=254 Identities=13% Similarity=0.131 Sum_probs=187.5
Q ss_pred eeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc--eeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV--SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 14 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
..++.|.++|++++|+|++ ++|++|+.|+.|+|||+.++ .....+ .+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 5 ~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~s~~-~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKIVTCVDWAPK-SNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSCEEEEEECTT-TCCEEEEETTSSEEE
T ss_pred eeEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceEEEEEE-ecCCceEEEEEEeCC-CCEEEEEeCCCeEEE
Confidence 3456678899999999999 68999999999999999987 444444 689999999999999 899999999999999
Q ss_pred EECCCCc---ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec-CCccEEEE
Q 016032 92 TDLETGL---ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR-KGSKVVGL 167 (396)
Q Consensus 92 wd~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~-~~~~i~~~ 167 (396)
||+.+++ ....+..+. ..|.+++|+|++++|++++.++.|++||++............. +...|.++
T Consensus 82 wd~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLN---------RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp C------CCCCEEECCCCS---------SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred EEcCCCCceeeeeEecccC---------CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 9999877 222222221 2399999999999999999999999999998764222223333 66789999
Q ss_pred EeccCCCCEEEEeeCCCcEEEEecCCCC---------------CCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEE
Q 016032 168 HCNPIQPELLLSCGNDHFARIWDIRRLE---------------AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRI 232 (396)
Q Consensus 168 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~---------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 232 (396)
+|+| ++.+|++++.|+.|++||++... ....+..+.|...|.+++|+|++++|++++.|+.|++
T Consensus 153 ~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 153 DWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp EECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-
T ss_pred EEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEE
Confidence 9999 99999999999999999986322 1222333378899999999999999999999999999
Q ss_pred EEcccccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC
Q 016032 233 WDSIFGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 233 wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
||+.+++.... ....+..+.. ...+.|+|+ |++++ +|+.++.+ +|+..
T Consensus 232 wd~~~~~~~~~-----~~~~~~~~~~~v~~~~~s~~---------~~~l~---~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 232 AYPSAPEQPPR-----ALITVKLSQLPLRSLLWANE---------SAIVA---AGYNYSPI-LLQGN 280 (377)
T ss_dssp CEECSTTSCEE-----ECCCEECSSSCEEEEEEEET---------TEEEE---EESSSSEE-EECCC
T ss_pred EECCCCCCcce-----eeEeecCCCCceEEEEEcCC---------CCEEE---EEcCCcEE-EEEeC
Confidence 99998775110 0111122222 347889988 77777 66655555 66654
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-40 Score=291.61 Aligned_cols=299 Identities=14% Similarity=0.235 Sum_probs=234.3
Q ss_pred ccCCeEEEEecCCCCcEEEEE----------eCCCcEEEeecccceee-eEecCCcccceeEEEEecCCCcEEEEEeCCC
Q 016032 19 HSRRVTCLEFHPTNNHILLSG----------DKKGQVGVWDFYKVSEK-IVYGNIHSCIVNNIRFNPTNDGTVYAASSDG 87 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~----------~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 87 (396)
+...|.+++|+|++..+|++| +.|+.|+|||+.++... ......|...|.+++|+|+ +.+|++++.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHN-NKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSS-SSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCC-CCeEEEEccCC
Confidence 445799999999985589999 88999999999887532 1111358999999999999 99999999999
Q ss_pred eEEEEECCC----CcccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCC------CCcccee
Q 016032 88 TVSCTDLET----GLALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNS------RSGEAIL 156 (396)
Q Consensus 88 ~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~------~~~~~~~ 156 (396)
.|++|++.+ .+....+..+. ..|.+++|+|+ +.+|++++.|+.|++||+.+.. .......
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHS---------SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSS---------SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEeecccccccccchhhccCCc---------cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 999999987 23444443322 23999999998 8999999999999999999876 3322222
Q ss_pred eecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC----CCCCceeEEEEcCCC-CEEEEEeCCC---
Q 016032 157 IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL----PHKRVVNSAYFSPSG-SKILTTSQDN--- 228 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----~~~~~i~~~~~~~~~-~~l~~~~~d~--- 228 (396)
...+...+.+++|+|..+.+|++++.|+.|++||+++.+....+... +|...|.+++|+|++ .+|++++.|+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 34566689999999933789999999999999999875543333221 127889999999987 6899999998
Q ss_pred cEEEEEcccccccCCCcceeeccccc-cc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 229 RLRIWDSIFGNLDSPSREIVHSHDFN-RH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 229 ~i~iwd~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
.|++||++++.... ..+. .+ .....+.|+|.+ +++++ +++.|+.|++||+.+++.+..+
T Consensus 241 ~i~~~d~~~~~~~~--------~~~~~~~~~~v~~~~~s~~~--------~~~l~---s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 241 SILIWDLRNANTPL--------QTLNQGHQKGILSLDWCHQD--------EHLLL---SSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp CCCEEETTSTTSCS--------BCCCSCCSSCEEEEEECSSC--------SSCEE---EEESSSEEEEECSSSCCEEEEE
T ss_pred eEEEEeCCCCCCCc--------EEeecCccCceeEEEeCCCC--------CCeEE---EEeCCCCEEEeeCCCCccceee
Confidence 99999999863211 1111 12 233578999932 66777 7889999999999999999888
Q ss_pred cCCCCCCCcceeeeccCC-cEEEeec-CCcEEEEcCCCcceeee
Q 016032 307 MDPNITTISPVNKLHPRD-DVLASGS-SRSIFIWRPKEKSELVE 348 (396)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~-~~l~sg~-d~~i~iw~~~~~~~~~~ 348 (396)
..|. ..+.++ +|+|++ .+|++++ |+.|++|++.++.....
T Consensus 302 ~~~~-~~v~~~-~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 302 PARG-NWCFKT-KFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp ECSS-SCCCCE-EECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred cCCC-CceEEE-EECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 8776 778888 899999 8999999 99999999988775443
No 39
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.3e-39 Score=283.53 Aligned_cols=290 Identities=17% Similarity=0.243 Sum_probs=226.7
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
++.|+|++++ +||+|. |++|+|||+.+++....+. .+|...|++|+|+|+ +.+|++|+.||+|++||+.+++.+.
T Consensus 108 ~~~l~wS~~n--~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd-g~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 108 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEECCCC--EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC-CCEEEEEECCCeEEEEEcCCCcEEE
Confidence 5679999864 688775 8999999999987665542 568889999999999 9999999999999999999999888
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 181 (396)
.+..+... +.++++ ++..+++|+.++.+++||......... ....+...+..+.++| ++.++++++
T Consensus 184 ~~~~h~~~---------v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~--~~~~h~~~~~~~~~~~-~g~~l~s~~ 249 (420)
T 4gga_A 184 NMTSHSAR---------VGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVA--TLSGHSQEVCGLRWAP-DGRHLASGG 249 (420)
T ss_dssp EECCCSSC---------EEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEE--EEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred EEeCCCCc---------eEEEee--CCCEEEEEeCCCceeEeeecccceeeE--EecccccceeeeeecC-CCCeeeeee
Confidence 77554332 666666 578999999999999999987654332 3445566899999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCc--cccCCCCCceeEEEEcCCC-CEEEE--EeCCCcEEEEEcccccccCCCcceeeccccccc
Q 016032 182 NDHFARIWDIRRLEAGSS--LCDLPHKRVVNSAYFSPSG-SKILT--TSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRH 256 (396)
Q Consensus 182 ~d~~i~~wd~~~~~~~~~--~~~~~~~~~i~~~~~~~~~-~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 256 (396)
.|+.+++|+..+.+.... .....|...|.+++|+|.+ .++++ |+.|+.|++||+.+++... .+..+
T Consensus 250 ~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~---------~~~~~ 320 (420)
T 4gga_A 250 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS---------AVDAH 320 (420)
T ss_dssp TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE---------EEECS
T ss_pred ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce---------eeccc
Confidence 999999999987553221 1223688999999999954 45555 4579999999999887632 12223
Q ss_pred CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcE
Q 016032 257 LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSI 335 (396)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i 335 (396)
.....+.|+|+. ..++. .+|..|+.|+|||+.+++++.++.+|. ..|.++ +|+|+|++|+||+ |++|
T Consensus 321 ~~v~~~~~~~~~---------~~lv~-~sg~~d~~I~iwd~~~~~~v~~l~gH~-~~V~~l-~~spdg~~l~S~s~D~tv 388 (420)
T 4gga_A 321 SQVCSILWSPHY---------KELIS-GHGFAQNQLVIWKYPTMAKVAELKGHT-SRVLSL-TMSPDGATVASAAADETL 388 (420)
T ss_dssp SCEEEEEEETTT---------TEEEE-EECTTTCCEEEEETTTCCEEEEECCCS-SCEEEE-EECTTSSCEEEEETTTEE
T ss_pred cceeeeeecCCC---------CeEEE-EEecCCCEEEEEECCCCcEEEEEcCCC-CCEEEE-EEcCCCCEEEEEecCCeE
Confidence 344578888873 33321 146789999999999999999998876 788888 8999999999999 9999
Q ss_pred EEEcCCCcceeeeccc
Q 016032 336 FIWRPKEKSELVEQKE 351 (396)
Q Consensus 336 ~iw~~~~~~~~~~~~~ 351 (396)
+|||+.+..+....+.
T Consensus 389 riWdv~~~~~~~~~~~ 404 (420)
T 4gga_A 389 RLWRCFELDPARRRER 404 (420)
T ss_dssp EEECCSCSSCC-----
T ss_pred EEEECCCCCccchhhh
Confidence 9999987765555443
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8e-39 Score=284.06 Aligned_cols=303 Identities=13% Similarity=0.084 Sum_probs=229.2
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
|++........+..| ..+....|+|++ ++|++|+.||.|++||+.++.....+ .+|...|.+++|+|+ +.+|++++
T Consensus 83 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~s~s 158 (420)
T 3vl1_A 83 FNTIIRDGSKMLKRA-DYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQREID-QAHVSEITKLKFFPS-GEALISSS 158 (420)
T ss_dssp EECCSEETTTTSCSC-CEEEEEEECSSS-CEEEEEETTSCEEEECTTSCEEEEET-TSSSSCEEEEEECTT-SSEEEEEE
T ss_pred EEecccceeeEEecC-CceEEEEEecCC-CEEEEEECCCCEEEEeCCCcceeeec-ccccCccEEEEECCC-CCEEEEEe
Confidence 555666666666666 445556789998 68999999999999999987776655 689999999999999 89999999
Q ss_pred CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC---
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG--- 161 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~--- 161 (396)
.|+.|++||+.+++.+..+..+... |.+++|+|++.+|++++.|+.|++||+++++..........+.
T Consensus 159 ~d~~i~iwd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 159 QDMQLKIWSVKDGSNPRTLIGHRAT---------VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV 229 (420)
T ss_dssp TTSEEEEEETTTCCCCEEEECCSSC---------EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE
T ss_pred CCCeEEEEeCCCCcCceEEcCCCCc---------EEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc
Confidence 9999999999999888777654433 9999999999999999999999999999876543322211222
Q ss_pred ------------------ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC-EEE
Q 016032 162 ------------------SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS-KIL 222 (396)
Q Consensus 162 ------------------~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 222 (396)
..+.+++|+| ++.+|++++.||.|++||+++.+....+. ..|...|.+++|+|++. +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEE
Confidence 2444555678 88999999999999999998755433321 25788999999999998 999
Q ss_pred EEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 223 TTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 223 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
+|+.||.|++||+++++.. ...... .+..++...+.++ +++++ +++.|+.|++|++.....
T Consensus 308 ~g~~dg~i~vwd~~~~~~~--~~~~~~-----~~~~~v~~~~~~~---------~~~l~---s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECP--VGEFLI-----NEGTPINNVYFAA---------GALFV---SSGFDTSIKLDIISDPES 368 (420)
T ss_dssp EEETTSEEEEEETTCTTSC--SEEEEE-----STTSCEEEEEEET---------TEEEE---EETTTEEEEEEEECCTTC
T ss_pred EEeCCCeEEEEEcCCCcCc--hhhhhc-----cCCCCceEEEeCC---------CCEEE---EecCCccEEEEeccCCCC
Confidence 9999999999999987531 111110 1222334445554 66666 789999999999876422
Q ss_pred hh--------hhcCCCCCCCcceeeeccCCc----EEEeecCCcEEEEcCCC
Q 016032 303 VA--------EVMDPNITTISPVNKLHPRDD----VLASGSSRSIFIWRPKE 342 (396)
Q Consensus 303 ~~--------~~~~~~~~~i~~~~~~~~~~~----~l~sg~d~~i~iw~~~~ 342 (396)
.. .....+...+..+ +|+|++. ++++|++|.+.+|++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQF-CYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEE-EEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CccceeccCccEEccCCcceEEE-EEccCCCCcceEEEEcCCceEEEEeccC
Confidence 11 1112233677777 8999998 56666699999999865
No 41
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.5e-39 Score=269.92 Aligned_cols=257 Identities=16% Similarity=0.177 Sum_probs=198.4
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc--eeeeEecCCcccceeEEEEecC-CCcEEEEEeCCCeE
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV--SEKIVYGNIHSCIVNNIRFNPT-NDGTVYAASSDGTV 89 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v 89 (396)
+..+.+|.+.|++++|+|+| ++||+|+.|++|+|||+... .....+ .+|..+|.+++|+|. .+.+|++++.|++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CEECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ceeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 35688999999999999999 68999999999999999753 344444 789999999999863 26899999999999
Q ss_pred EEEECCCCcc--cceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 90 SCTDLETGLA--LSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 90 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
++||+++++. +..+..+. ..|.+++|+|+ +.+|++++.|+.|++||++...... ......|...|.
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~ 149 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHS---------ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVN 149 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCS---------SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEE
T ss_pred EEEEcCCCceEEEEEeecCC---------CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccc
Confidence 9999988753 22232222 23999999998 8999999999999999998764321 223455666899
Q ss_pred EEEeccCC-------------CCEEEEeeCCCcEEEEecCCCCCCC-cccc-CCCCCceeEEEEcCCC---CEEEEEeCC
Q 016032 166 GLHCNPIQ-------------PELLLSCGNDHFARIWDIRRLEAGS-SLCD-LPHKRVVNSAYFSPSG---SKILTTSQD 227 (396)
Q Consensus 166 ~~~~~~~~-------------~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~-~~~~~~i~~~~~~~~~---~~l~~~~~d 227 (396)
+++|+| + +.+|++|+.|+.|++||+++..... .... .+|...|.+++|+|++ .+|++++.|
T Consensus 150 ~~~~~p-~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 150 SASWAP-ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEECC-CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred eEeecC-CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 999999 4 4699999999999999997644211 2222 2699999999999984 899999999
Q ss_pred CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc
Q 016032 228 NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM 307 (396)
Q Consensus 228 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~ 307 (396)
++|++||+++..... . . ..+ ...
T Consensus 229 ~~v~iWd~~~~~~~~----------------------------------~--------------~--------~~~-~~~ 251 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPW----------------------------------K--------------K--------TLL-KEE 251 (297)
T ss_dssp SCEEEEEESSTTSCC----------------------------------E--------------E--------EES-SSS
T ss_pred CcEEEEEeCCCCCcc----------------------------------c--------------e--------eee-ecc
Confidence 999999986432100 0 0 000 001
Q ss_pred CCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCC
Q 016032 308 DPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 308 ~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
.+ ...+.++ +|+|++++|++++ |+.|+||+..
T Consensus 252 ~~-~~~v~~~-~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 252 KF-PDVLWRA-SWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CC-SSCEEEE-EECSSSCCEEEEETTSCEEEEEEC
T ss_pred cC-CCcEEEE-EECCCCCEEEEEcCCCcEEEEEEC
Confidence 12 2556677 8999999999998 9999999976
No 42
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=273.96 Aligned_cols=246 Identities=16% Similarity=0.269 Sum_probs=208.8
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEE
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
...+.+|...|.+++|+|++ .++++++.|++|++||+.++.....+ ..|...+.+++|+|+ +.+|++++.|+.|++|
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~~~~~-~~~~~~~~~~~~spd-g~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQIKSI-DAGPVDAWTLAFSPD-SQYLATGTHVGKVNIF 149 (321)
T ss_dssp EEEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCTTCCCCEEECTT-SSEEEEECTTSEEEEE
T ss_pred eeeeccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCEEEEE-eCCCccEEEEEECCC-CCEEEEEcCCCcEEEE
Confidence 45689999999999999998 68999999999999999998887776 568889999999999 9999999999999999
Q ss_pred ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccC
Q 016032 93 DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
++++++....+..+.. .+.+++|+|++++|++++.||.|++||+++++... ....+..+|.+++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~---------~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~sp- 216 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGK---------FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMPIRSLTFSP- 216 (321)
T ss_dssp ETTTCSEEEEEECSSS---------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCSSCCCEEEECT-
T ss_pred EcCCCceeEEecCCCc---------eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EEcccCCceeEEEEcC-
Confidence 9999888776654433 28999999999999999999999999999875433 3345666899999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeeccc
Q 016032 173 QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHD 252 (396)
Q Consensus 173 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 252 (396)
++.+|++++.|+.|++||+++.+....+ .+|...|.+++|+|++.+|++++.|+.|++||+.+++++..
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~--------- 285 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHANLAGTL--SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT--------- 285 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---------
T ss_pred CCCEEEEEcCCCeEEEEECCCcceeEEE--cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE---------
Confidence 9999999999999999999865443222 36899999999999999999999999999999998775321
Q ss_pred ccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEc
Q 016032 253 FNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDI 297 (396)
Q Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~ 297 (396)
+..+. ....+.|+|+ |.+++ +++.|+.|++||.
T Consensus 286 ~~~h~~~v~~v~~s~~---------g~~l~---s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGN---------GSKIV---SVGDDQEIHIYDC 319 (321)
T ss_dssp ECCCSSCEEEEEECTT---------SSEEE---EEETTCCEEEEEC
T ss_pred EcCCCCcEEEEEECCC---------CCEEE---EEeCCCeEEEEeC
Confidence 11222 2357899998 77777 7899999999996
No 43
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5e-39 Score=277.99 Aligned_cols=308 Identities=18% Similarity=0.136 Sum_probs=219.0
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce----eeeEecCCcccceeEEEEecC-CCcEEEEEeCCC
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS----EKIVYGNIHSCIVNNIRFNPT-NDGTVYAASSDG 87 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg 87 (396)
...+.+|.+.|++++|+|++ .+|++|+.||.|+|||+.+.. ....+ .+|...|.+++|+|. ++.+|++++.||
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred cccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 35678999999999999998 689999999999999998753 33333 679999999999993 288999999999
Q ss_pred eEEEEECCCCcc---------cceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCcccee
Q 016032 88 TVSCTDLETGLA---------LSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAIL 156 (396)
Q Consensus 88 ~v~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~ 156 (396)
.|++||+.+++. ...+..+. ..+.+++|+|+ +.++++++.||.|++||++++........
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSK---------GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCS---------SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred eEEEEecCCCcccccccCcceeeeecccC---------CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 999999998743 33332222 23999999999 99999999999999999998765543221
Q ss_pred ----------eecCCccEEEEEeccC--CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCC----CE
Q 016032 157 ----------IHRKGSKVVGLHCNPI--QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSG----SK 220 (396)
Q Consensus 157 ----------~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~ 220 (396)
...+...+.+++|+|. ++.++++++.++.+.+|+.............+|...|.+++|+|++ .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 1134557999999992 2899999999999988877654332222233689999999999998 89
Q ss_pred EEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCcc
Q 016032 221 ILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTG 300 (396)
Q Consensus 221 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~ 300 (396)
|++++.||.|++||++++............. ....+.+. ......+. . .+.....+.+|+..+.
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~--~---~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNS--------NMFDNSAD---VDMDAQGR--S---DSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEETTSCEEEEEEEECC-------------------------------------------------------CCSEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccce--------eccCCCcc---cccccccc--c---ccccceeeeecccccc
Confidence 9999999999999998765422111100000 00111111 01111011 1 3445566778887788
Q ss_pred chhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeec
Q 016032 301 QLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 301 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~ 349 (396)
+.+..+.+|. ..+.++ +|+|++++|++|+ ||.|+||++.+++.+..+
T Consensus 297 ~~~~~~~~h~-~~v~~~-~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 297 ELLSEHDDHN-GEVWSV-SWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEEEECTTS-SCEEEE-EECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cEEEEEeccc-ccEEEE-EEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 8888887776 778888 8999999999999 999999999998766554
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-38 Score=285.35 Aligned_cols=300 Identities=17% Similarity=0.216 Sum_probs=233.5
Q ss_pred cceeeeccccCCe-EEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 11 VNCAVIRYHSRRV-TCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 11 ~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
.....+.+|.+.| .++.++ + .+|++|+.||.|++||+.+++....+ .+|...|.+++|+|+ + .|++|+.||+|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~~~~~~-~~h~~~V~~l~~~~~-~-~l~s~s~dg~i 185 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKKFLLQL-SGHDGGVWALKYAHG-G-ILVSGSTDRTV 185 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECST-T-EEEEEETTSCE
T ss_pred cceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCcEEEEE-eCCCcCEEEEEEcCC-C-EEEEEeCCCCE
Confidence 3456899999885 666664 4 48999999999999999999888777 689999999999997 4 99999999999
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeC--CCCCEEEEEecCCeEEEEeCCCCCCCcc--------------
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDIN--PEKGVVLVADNFGFLYLVDARTNSRSGE-------------- 153 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~g~i~i~d~~~~~~~~~-------------- 153 (396)
++||+++++.+..+..+... |.+++|+ +++.++++++.||.|++||+.+......
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNST---------VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp EEEETTTTEEEEEECCCSSC---------EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred EEEECCCCcEEEEECCCCCc---------cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 99999999888777544332 8888887 5789999999999999999987654321
Q ss_pred ------ceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC
Q 016032 154 ------AILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD 227 (396)
Q Consensus 154 ------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 227 (396)
......+...+.++ ++ ++.++++++.|+.|++||+++.+....+ .+|...|.+++|+|++.+|++|+.|
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~--~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDHERKRCISASMD 331 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEEccCccceEEEE--cC-CCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 11233455567766 45 7799999999999999999865543322 2688999999999999999999999
Q ss_pred CcEEEEEcccccccCCCcceeecccccccCCc-eeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 228 NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTP-FRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 228 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
|.|++||+++++.... +..+... ..+.|+ +.+++ +|+.|+.|++||+.++.....+
T Consensus 332 g~i~vwd~~~~~~~~~---------~~~h~~~v~~~~~~-----------~~~l~---s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 332 TTIRIWDLENGELMYT---------LQGHTALVGLLRLS-----------DKFLV---SAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp SCEEEEETTTTEEEEE---------ECCCSSCEEEEEEC-----------SSEEE---EEETTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEECCCCcEEEE---------EeCCCCcEEEEEEc-----------CCEEE---EEeCCCcEEEEECCCCceeeee
Confidence 9999999998775321 1122221 234444 44566 7899999999999988765554
Q ss_pred cCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCCcceeee-ccccceEE
Q 016032 307 MDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKSELVE-QKEEMKII 356 (396)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~~~~~~-~~~~~~~~ 356 (396)
. +...+..+ +|+|++++|++|+|+.|++||+.+++.+.. +..+...+
T Consensus 389 ~--~~~~~~~~-~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v 436 (464)
T 3v7d_B 389 H--HTNLSAIT-TFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQI 436 (464)
T ss_dssp E--CTTCCCEE-EEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEE
T ss_pred c--CCCCccEE-EEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCCCcE
Confidence 3 32344444 899999999999999999999999999876 44444443
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-38 Score=280.77 Aligned_cols=295 Identities=17% Similarity=0.225 Sum_probs=226.2
Q ss_pred eeccccCC--eEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEE
Q 016032 15 VIRYHSRR--VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 15 ~~~~h~~~--v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
...+|... +.+++|++. .+++++.|+.|++||+.++.........|...|.+++|+|+ +.+|++++.||.|++|
T Consensus 86 ~~~~~~~~~~~~~~~~s~~---~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~-~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSNL---NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHD-GSFLSVGLGNGLVDIY 161 (401)
T ss_dssp ECTTCCCCTTCBCEEECTT---SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTT-SSEEEEEETTSCEEEE
T ss_pred eCCCCcCCceEEEEeecCC---CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCC-CCEEEEECCCCeEEEE
Confidence 34467665 445666653 37778899999999999988877776668999999999998 9999999999999999
Q ss_pred ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccC
Q 016032 93 DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
|+.+++.+..+..+.. .+.+++| ++..+++++.+|.|++||++...... .....+...|.+++|+|
T Consensus 162 d~~~~~~~~~~~~~~~---------~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~- 227 (401)
T 4aez_A 162 DVESQTKLRTMAGHQA---------RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI--GTLQGHSSEVCGLAWRS- 227 (401)
T ss_dssp ETTTCCEEEEECCCSS---------CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE--EEEECCSSCEEEEEECT-
T ss_pred ECcCCeEEEEecCCCC---------ceEEEEE--CCCEEEEEcCCCCEEEEecccCccee--eEEcCCCCCeeEEEEcC-
Confidence 9999988877754433 2899999 56899999999999999998644332 23445666899999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC-EEEEEe--CCCcEEEEEcccccccCCCcceee
Q 016032 173 QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS-KILTTS--QDNRLRIWDSIFGNLDSPSREIVH 249 (396)
Q Consensus 173 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~ 249 (396)
++.+|++++.|+.|++||+++.+....+ ..|...|.+++|+|++. ++++++ .|+.|++||+.+++.....
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~----- 300 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTK--TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV----- 300 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEE--CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE-----
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEe--cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE-----
Confidence 9999999999999999999864432222 36889999999999664 556654 6999999999987653311
Q ss_pred cccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhh--hcCCCCCCCcceeeeccCCcEE
Q 016032 250 SHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAE--VMDPNITTISPVNKLHPRDDVL 327 (396)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l 327 (396)
........+.|+|+ |++++.. +|..|+.|++||+.+++.... +.+|. ..+.++ +|+|++++|
T Consensus 301 ----~~~~~v~~~~~s~~---------~~~l~~~-~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~-~~s~dg~~l 364 (401)
T 4aez_A 301 ----DAGSQVTSLIWSPH---------SKEIMST-HGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYS-ALSPDGRIL 364 (401)
T ss_dssp ----ECSSCEEEEEECSS---------SSEEEEE-ECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEE-EECTTSSEE
T ss_pred ----eCCCcEEEEEECCC---------CCeEEEE-eecCCCcEEEEecCCccceeEEEecCCC-CCEEEE-EECCCCCEE
Confidence 12223457899998 6666510 267899999999998665544 44554 778888 899999999
Q ss_pred Eeec-CCcEEEEcCCCcceeeecc
Q 016032 328 ASGS-SRSIFIWRPKEKSELVEQK 350 (396)
Q Consensus 328 ~sg~-d~~i~iw~~~~~~~~~~~~ 350 (396)
++++ ||.|++|++.+++.+....
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEECTTSEEEEEECCC--------
T ss_pred EEEeCCCcEEEEECCCCccccccc
Confidence 9999 9999999999998776543
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-39 Score=277.86 Aligned_cols=257 Identities=15% Similarity=0.140 Sum_probs=190.6
Q ss_pred eeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee-eeEecCCcccceeEEEEecC-CCcEEEEEeCCCeEEE
Q 016032 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE-KIVYGNIHSCIVNNIRFNPT-NDGTVYAASSDGTVSC 91 (396)
Q Consensus 14 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~v~i 91 (396)
..+.+|.+.|++++|+|++ ++||+|+.|++|+|||+.++.. ......+|...|.+++|+|. .+.+|++++.|++|++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 4578999999999999999 6899999999999999987643 22233689999999999753 2789999999999999
Q ss_pred EECCCCccc--ceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEE
Q 016032 92 TDLETGLAL--SLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGL 167 (396)
Q Consensus 92 wd~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 167 (396)
||+++++.. ..+..+. ..|.+++|+|+ +.+|++++.|+.|++||++.............|...+.++
T Consensus 86 Wd~~~~~~~~~~~~~~h~---------~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHD---------SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp ECCSSSCCCEEEEECCCS---------SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC
T ss_pred EECCCCcceEEEEccCCC---------CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE
Confidence 999987532 2232222 23999999998 7899999999999999998753221111233455678999
Q ss_pred EeccCC-----------------CCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCC----CEEEEEe
Q 016032 168 HCNPIQ-----------------PELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSG----SKILTTS 225 (396)
Q Consensus 168 ~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~----~~l~~~~ 225 (396)
+|+| + +.+|++|+.|+.|++||++.......+..+ +|...|.+++|+|++ .+|++++
T Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 157 SWAP-AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp EECC-CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEcc-ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 9998 4 468999999999999999643221223333 799999999999986 8899999
Q ss_pred CCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhh
Q 016032 226 QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAE 305 (396)
Q Consensus 226 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~ 305 (396)
.|++|++|++.+..... +. . ..
T Consensus 236 ~D~~v~iw~~~~~~~~~---------------------~~--------------------------~-----------~~ 257 (316)
T 3bg1_A 236 QDGRVFIWTCDDASSNT---------------------WS--------------------------P-----------KL 257 (316)
T ss_dssp TTCEEEEEECSSTTCCC---------------------CB--------------------------C-----------CE
T ss_pred CCCeEEEEEccCccccc---------------------hh--------------------------h-----------hh
Confidence 99999999986421100 00 0 00
Q ss_pred hcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCC
Q 016032 306 VMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 306 ~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
+..+ ...+.++ +|+|++++|++|+ |+.|+||+..
T Consensus 258 ~~~~-~~~v~~v-~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 258 LHKF-NDVVWHV-SWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEC-SSCEEEE-EECTTTCCEEEEESSSCEEEEEEC
T ss_pred hhcC-CCcEEEE-EEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1112 2567777 8999999999998 9999999976
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.5e-38 Score=303.96 Aligned_cols=311 Identities=18% Similarity=0.228 Sum_probs=256.7
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
..+.+.+|.+.|.+++|+|++ .+|++|+.||.|+|||+.++.....+ .+|..+|.+++|+|+ +.+|++++.||.|++
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVEVRSI-QVTETPVRAGKFIAR-KNWIIVGSDDFRIRV 81 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEEEGG-GTEEEEEETTSEEEE
T ss_pred cceeeecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCceEEEE-ecCCCcEEEEEEeCC-CCEEEEEeCCCeEEE
Confidence 457899999999999999999 68999999999999999998877777 579999999999999 999999999999999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEecc
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~ 171 (396)
||+.+++.+..+..+... |.+++|+|++.+|++++.+|.|++||+..+..... ....+...+.+++|+|
T Consensus 82 w~~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~--~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDY---------IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--TFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EETTTCCEEEEEECCSSC---------EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE--EEECCSSCEEEEEEET
T ss_pred EECCCCcEEEEEecCCCC---------EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE--EEcCCCCcEEEEEEEc
Confidence 999999988877654433 99999999999999999999999999987633322 3344556899999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC--CCCEEEEEeCCCcEEEEEcccccccCCCcceee
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP--SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVH 249 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 249 (396)
.++..|++++.||.|++||+++......+. ..+...+.+++|+| ++.+|++++.||.|++||+.+++....
T Consensus 151 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~------ 223 (814)
T 3mkq_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT------ 223 (814)
T ss_dssp TEEEEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeEEe-cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE------
Confidence 667899999999999999997655433332 24558899999999 999999999999999999988764321
Q ss_pred cccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc--E
Q 016032 250 SHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD--V 326 (396)
Q Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 326 (396)
+..+. ....+.|+|+ |.+++ +++.||.|++||+.+++.+..+..+. ..+.++ +|+|++. +
T Consensus 224 ---~~~~~~~v~~~~~~~~---------~~~l~---~~~~dg~v~vwd~~~~~~~~~~~~~~-~~v~~~-~~~~~~~~~~ 286 (814)
T 3mkq_A 224 ---LEGHMSNVSFAVFHPT---------LPIII---SGSEDGTLKIWNSSTYKVEKTLNVGL-ERSWCI-ATHPTGRKNY 286 (814)
T ss_dssp ---EECCSSCEEEEEECSS---------SSEEE---EEETTSCEEEEETTTCSEEEEECCSS-SSEEEE-EECTTCGGGE
T ss_pred ---EcCCCCCEEEEEEcCC---------CCEEE---EEeCCCeEEEEECCCCcEEEEeecCC-CcEEEE-EEccCCCceE
Confidence 11122 2347889998 66777 78899999999999999888887765 677777 8999987 5
Q ss_pred EEeecCCcEEEEcCCCcceeeeccccceEEEeec
Q 016032 327 LASGSSRSIFIWRPKEKSELVEQKEEMKIIVCGK 360 (396)
Q Consensus 327 l~sg~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 360 (396)
+++++++.+.+|++..+.....+......+..+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (814)
T 3mkq_A 287 IASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGG 320 (814)
T ss_dssp EEEEETTEEEEEECSCCSCCEEECSSSEEEEECC
T ss_pred EEEEeCCCEEEEEcCCCCceeEECCCCCEEEECc
Confidence 7777789999999988887777766666655443
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-38 Score=275.70 Aligned_cols=296 Identities=11% Similarity=0.065 Sum_probs=214.2
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCC-------cEEEeecccceee---------eEecCCcccceeEEEEecCCCcEEEEE
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKG-------QVGVWDFYKVSEK---------IVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.-||+|++|+|++ ++|++|+.+. .|++|++...... ...+.+|...|.++++.+ ..++++
T Consensus 14 g~PV~sv~fs~dg-~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g 89 (365)
T 4h5i_A 14 GYPAYGAKFLNND-TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVG 89 (365)
T ss_dssp SSCEEEEEEEETT-EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEE
T ss_pred CCCEEEEEEeCCC-cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEE
Confidence 4589999999999 7899987543 5999998754211 112356888899988764 466665
Q ss_pred -----------eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe--cCCeEEEEeCCCCCC
Q 016032 84 -----------SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD--NFGFLYLVDARTNSR 150 (396)
Q Consensus 84 -----------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~i~d~~~~~~ 150 (396)
+.|+.+++|++.+......................+.+++|+|||+++++++ .|+.|++||+.++..
T Consensus 90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 4577899999876543322211111111111222378999999999987654 689999999998765
Q ss_pred CccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC--
Q 016032 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN-- 228 (396)
Q Consensus 151 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-- 228 (396)
... ..+...|.+++|+| ++.++++++.+ .+.+|+..+...........|...|.+++|+|++.++++++.|+
T Consensus 170 ~~~----~~~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 170 KFE----IETRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp EEE----EECSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred EEE----eCCCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 432 23455799999999 99999999855 56667666544332233346888999999999999999999887
Q ss_pred --cEEEEEcccccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhh
Q 016032 229 --RLRIWDSIFGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAE 305 (396)
Q Consensus 229 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~ 305 (396)
.+++|++....... .....+..+.. ..+++|+|+ |++++ +|+.|+.|+|||+.+++++.+
T Consensus 244 ~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~V~~~~~Spd---------g~~la---sgs~D~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSV-----LRSKQVTNRFKGITSMDVDMK---------GELAV---LASNDNSIALVKLKDLSMSKI 306 (365)
T ss_dssp CEEEEEEEEETTEEEE-----EEEEEEESSCSCEEEEEECTT---------SCEEE---EEETTSCEEEEETTTTEEEEE
T ss_pred eeEEeecccccceecc-----eeeeeecCCCCCeEeEEECCC---------CCceE---EEcCCCEEEEEECCCCcEEEE
Confidence 58888887554311 11122222322 347899998 88888 899999999999999999988
Q ss_pred hcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCc
Q 016032 306 VMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 306 ~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~ 343 (396)
+...|...|.++ +|+|||++||+|+ |++|+||++...
T Consensus 307 ~~~gH~~~V~~v-~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 307 FKQAHSFAITEV-TISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSSSSCEEEE-EECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ecCcccCCEEEE-EECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 654444889999 9999999999999 999999998643
No 49
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-38 Score=272.10 Aligned_cols=255 Identities=15% Similarity=0.152 Sum_probs=208.8
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce---eeeEecCCcccceeEEEEecCCCcEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDGTVY 81 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~ 81 (396)
|++.+...+..+..|...|.+++|+|++ .+|++|+.|+.|++|++.+.. .......+|...|.++.|+++ + .++
T Consensus 82 Wd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~-~l~ 158 (340)
T 1got_B 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-N-QIV 158 (340)
T ss_dssp EETTTCCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET-T-EEE
T ss_pred EECCCCCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC-C-cEE
Confidence 6777778888999999999999999999 689999999999999998653 222233679999999999986 4 589
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG 161 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~ 161 (396)
+++.|++|++||+.+++.+..+..+.. .|.+++|+|++.++++|+.|+.|++||++++.... ....|.
T Consensus 159 s~s~d~~i~~wd~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~---~~~~h~ 226 (340)
T 1got_B 159 TSSGDTTCALWDIETGQQTTTFTGHTG---------DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ---TFTGHE 226 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSS---------CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE---EECCCS
T ss_pred EEECCCcEEEEECCCCcEEEEEcCCCC---------ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE---EEcCCc
Confidence 999999999999999988877754433 29999999999999999999999999999865432 344566
Q ss_pred ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccccccc
Q 016032 162 SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLD 241 (396)
Q Consensus 162 ~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 241 (396)
..|.+++|+| ++.+|++|+.|+.|++||+++.+....+....+...|.+++|+|++++|++|+.|+.|++||+.+++..
T Consensus 227 ~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 227 SDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 6899999999 999999999999999999987544333322234457999999999999999999999999999877643
Q ss_pred CCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEE
Q 016032 242 SPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFID 296 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd 296 (396)
. .+.+|.. ...+.|+|+ |.+++ +|+.|+.|+|||
T Consensus 306 ~---------~~~~h~~~v~~~~~s~d---------g~~l~---s~s~D~~i~iWd 340 (340)
T 1got_B 306 G---------VLAGHDNRVSCLGVTDD---------GMAVA---TGSWDSFLKIWN 340 (340)
T ss_dssp E---------EEECCSSCEEEEEECTT---------SSCEE---EEETTSCEEEEC
T ss_pred e---------EeecCCCcEEEEEEcCC---------CCEEE---EEcCCccEEecC
Confidence 2 1122222 347889998 77888 899999999996
No 50
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.1e-38 Score=269.23 Aligned_cols=257 Identities=15% Similarity=0.171 Sum_probs=204.3
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.++..+++|...|.+++|+|++ ++|++|+.|++|+|||+.+++....+ .+|...|.+++|+|+ +.+|++++.|++|+
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGETYQRF-VGHKSDVMSVDIDKK-ASMIISGSRDKTIK 132 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTT-SCEEEEEETTSCEE
T ss_pred ccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCeeEEE-ccCCCcEEEEEEcCC-CCEEEEEeCCCeEE
Confidence 3467899999999999999999 68999999999999999998887777 689999999999999 99999999999999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC------CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE------KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
+||++. +.+..+..+. ..+.++.+.|. +..+++++.|+.|++||+++..... ....|...|
T Consensus 133 vwd~~~-~~~~~~~~h~---------~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~---~~~~h~~~v 199 (319)
T 3frx_A 133 VWTIKG-QCLATLLGHN---------DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA---DFIGHNSNI 199 (319)
T ss_dssp EEETTS-CEEEEECCCS---------SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE---EECCCCSCE
T ss_pred EEECCC-CeEEEEeccC---------CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe---eecCCCCcE
Confidence 999974 4444443322 22889999885 4589999999999999998765332 344566789
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
.+++|+| ++.+|++++.|+.|++||+++.+. +..+.+...|.+++|+|++.+|++++.+ .+++|++..+......
T Consensus 200 ~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 200 NTLTASP-DGTLIASAGKDGEIMLWNLAAKKA---MYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDL 274 (319)
T ss_dssp EEEEECT-TSSEEEEEETTCEEEEEETTTTEE---EEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEE
T ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEECCCCcE---EEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeecc
Confidence 9999999 999999999999999999986544 3333456789999999999999988755 5999999876543221
Q ss_pred cceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCcc
Q 016032 245 REIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTG 300 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~ 300 (396)
.................++|+|+ |++++ +|+.|+.|+|||+.++
T Consensus 275 ~~~~~~~~~~~~~~v~~~~~spd---------g~~l~---sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 275 RPEFAGYSKAAEPHAVSLAWSAD---------GQTLF---AGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCCTTCCGGGCCCEEEEEECTT---------SSEEE---EEETTSCEEEEEEEEC
T ss_pred CccccccccCcCcceeEEEECCC---------CCEEE---EeecCceEEEEEEeec
Confidence 11111111111223357899998 88888 8999999999998765
No 51
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=282.50 Aligned_cols=303 Identities=15% Similarity=0.214 Sum_probs=216.5
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce-----------eeeEecCCcc------------cceeEEEEecC
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS-----------EKIVYGNIHS------------CIVNNIRFNPT 75 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~------------~~v~~~~~~~~ 75 (396)
|.+.|++++|+|++ .+||+|+.||.|+|||+.+.. ....+ .+|. ..|.+++|+|+
T Consensus 27 ~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp GGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCceEEEEEcCC
Confidence 68999999999999 689999999999999998765 23344 6788 88999999998
Q ss_pred CC--cEEEEEeCCCeEEEEECCCCccccee-ecCCC------------------------------CCCCCCcceeeeEE
Q 016032 76 ND--GTVYAASSDGTVSCTDLETGLALSLM-NVNPN------------------------------GWHGPRTWRMLYGM 122 (396)
Q Consensus 76 ~~--~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~------------------------------~~~~~~~~~~v~~~ 122 (396)
+ ..|++++.|++|++||+.++...... ..... ......+...|.++
T Consensus 105 -~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 105 -KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp -CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred -CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 6 79999999999999999865432100 00000 00001122349999
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCCccce-----eeecCCccEEEEEeccCCC-CEEEEeeCCCcEEEEecCCCCC
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAI-----LIHRKGSKVVGLHCNPIQP-ELLLSCGNDHFARIWDIRRLEA 196 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~ 196 (396)
+|+|++++|++| .|+.|++||++......... ....+...|.+++|+| ++ .+|++|+.|+.|++||+++.+.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCcc
Confidence 999999999998 79999999998533222211 2335666899999999 76 9999999999999999987654
Q ss_pred CC-ccccC-CCCC------------ceeEEEEcCCCCEEEEEeCCCcEEEEEccc-ccccCCCcceeeccc-------cc
Q 016032 197 GS-SLCDL-PHKR------------VVNSAYFSPSGSKILTTSQDNRLRIWDSIF-GNLDSPSREIVHSHD-------FN 254 (396)
Q Consensus 197 ~~-~~~~~-~~~~------------~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~-------~~ 254 (396)
.. .+..+ .|.. .|.+++|+|++++|++++. +.|++||+++ ++............. ..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 11 12222 3443 8999999999999999998 9999999987 554332211000000 00
Q ss_pred ccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcC--------------------------
Q 016032 255 RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD-------------------------- 308 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~-------------------------- 308 (396)
.....+.++|+|+ |++++ +|+.|+.|++||+.+++.+. +..
T Consensus 341 ~i~~~~~~~~s~~---------~~~l~---s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (447)
T 3dw8_B 341 CIFDKFECCWNGS---------DSVVM---TGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDE 407 (447)
T ss_dssp GGGCCCCEEECTT---------SSEEE---EECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTC
T ss_pred ccccceEEEECCC---------CCEEE---EeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCccccc
Confidence 0001234899998 77777 89999999999999887642 111
Q ss_pred ------CCCCCCcceeeeccCCcEEEeecCCcEEEEcCC
Q 016032 309 ------PNITTISPVNKLHPRDDVLASGSSRSIFIWRPK 341 (396)
Q Consensus 309 ------~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~ 341 (396)
.....+..+ +|+|++.+||+++.+.+++|...
T Consensus 408 ~~~~~~~~~~~i~~~-~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 408 ISVDSLDFNKKILHT-AWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp EEGGGCCTTSCCCEE-EECSSSSEEEEECSSCEEEEECC
T ss_pred ccccccccCCceeEE-EECCCCCEEEEEecceeeeeccc
Confidence 112345666 89999999999996668888643
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=267.12 Aligned_cols=283 Identities=17% Similarity=0.243 Sum_probs=221.5
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.++|+||+++ +||+|. |++|+|||+.+++....+. .+|...|.+++|+|+ +++|++|+.||+|++|++++++.+.
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC-CCEEEEEECCCcEEEeecCCceeEE
Confidence 5789999975 677765 8999999999988766552 568889999999999 9999999999999999999999888
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 181 (396)
.+..+... +.+ +++++..+++++.++.+++|+......... ....+...+..+.+.+ ++.+|++++
T Consensus 104 ~~~~h~~~---------~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~s~~ 169 (318)
T 4ggc_A 104 NMTSHSAR---------VGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVA--TLSGHSQEVCGLRWAP-DGRHLASGG 169 (318)
T ss_dssp EEECCSSC---------EEE--EEEETTEEEEEETTSEEEEEETTSSSCEEE--EEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred EecCccce---------EEE--eecCCCEEEEEecCCceEeeecCCCceeEE--EEcCccCceEEEEEcC-CCCEEEEEe
Confidence 77654332 444 455678999999999999999987654432 3445566899999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCc--cccCCCCCceeEEEEcCCCCEE---EEEeCCCcEEEEEcccccccCCCcceeeccccccc
Q 016032 182 NDHFARIWDIRRLEAGSS--LCDLPHKRVVNSAYFSPSGSKI---LTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRH 256 (396)
Q Consensus 182 ~d~~i~~wd~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 256 (396)
.|+.|++||+++.+.... .....+.+.|.+++++|.+..+ ++++.++.|++||........ .....
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~---------~~~~~ 240 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS---------AVDAH 240 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE---------EEECS
T ss_pred cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc---------cccce
Confidence 999999999987554322 2222577889999999965533 456778999999998765421 11122
Q ss_pred CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcE
Q 016032 257 LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSI 335 (396)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i 335 (396)
.....+.|+|.. .+++. .+|+.|+.|++||+.+++++.++.+|. ..|.++ +|+|+|++|+||+ |++|
T Consensus 241 ~~v~~~~~~~~~---------~~~~~-~sg~~d~~i~iwd~~~~~~~~~l~gH~-~~V~~l-~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 241 SQVCSILWSPHY---------KELIS-GHGFAQNQLVIWKYPTMAKVAELKGHT-SRVLSL-TMSPDGATVASAAADETL 308 (318)
T ss_dssp SCEEEEEEETTT---------TEEEE-EECTTTCCEEEEETTTCCEEEEECCCS-SCEEEE-EECTTSSCEEEEETTTEE
T ss_pred eeeeeeeecccc---------cceEE-EEEcCCCEEEEEECCCCcEEEEEcCCC-CCEEEE-EEcCCCCEEEEEecCCeE
Confidence 223467777763 22221 156789999999999999999998876 788888 8999999999999 9999
Q ss_pred EEEcCCCcc
Q 016032 336 FIWRPKEKS 344 (396)
Q Consensus 336 ~iw~~~~~~ 344 (396)
+|||+.+.+
T Consensus 309 ~iWd~~~~d 317 (318)
T 4ggc_A 309 RLWRCFELD 317 (318)
T ss_dssp EEECCSCCC
T ss_pred EEEECCCCC
Confidence 999987654
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-38 Score=273.40 Aligned_cols=254 Identities=14% Similarity=0.178 Sum_probs=196.5
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeE---ecCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIV---YGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
.....+|...|++++|+|++ + +++++.||+|+|||+.+++.... ...+|...|.+++|+|+ +.+|++++.|+.|
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~-~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v 163 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEK-G-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSV 163 (357)
T ss_dssp CSEEEECSSCEEEEEEETTT-E-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred ecccCCCCCCEEEEEEcCCC-C-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeE
Confidence 34556799999999999997 4 56678899999999988654332 22579999999999999 9999999999999
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
++||+++++.+..+..+... |.+++|++++. ++++++.|+.|++||+++++..... ....+...+.+++
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~---------v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~~~v~~v~ 233 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSE---------VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI-DFCASDTIPTSVT 233 (357)
T ss_dssp EEEETTTTEEEEEECCCSSC---------EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC-CCTTCCSCEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCC---------EEEEEEccCCCceeeeeccCCceEEEECCCCceeeee-eeccccccccchh
Confidence 99999999988877654433 99999999874 7889999999999999987765432 3344556799999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCC-CEEEEEeCCCcEEEEEcccccccCCCcce
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSG-SKILTTSQDNRLRIWDSIFGNLDSPSREI 247 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 247 (396)
|+|..+.+|++|+.|+.|++||+++.+....+ ..|...|++++|+|++ ++|++|+.|++|+|||++++++....
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--- 308 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTS--AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--- 308 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEE--CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC---
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEE--eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC---
Confidence 99955778999999999999999876554333 2688999999999987 67999999999999999988764311
Q ss_pred eecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 248 VHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
........++|+|.+ +.+++ +++.|++|++|++.+..
T Consensus 309 ------~H~~~V~~vafsP~d--------~~~l~---s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 309 ------SHRDFVTGVAWSPLD--------HSKFT---TVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ------CCSSCEEEEEECSSS--------TTEEE---EEETTSCEEEEECC---
T ss_pred ------CCCCCEEEEEEeCCC--------CCEEE---EEcCCCeEEEEECCCCC
Confidence 111223578999843 56666 78999999999997543
No 54
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-37 Score=263.73 Aligned_cols=264 Identities=18% Similarity=0.261 Sum_probs=214.1
Q ss_pred cCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCe
Q 016032 60 GNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF 139 (396)
Q Consensus 60 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~ 139 (396)
..+|...|.+++|+|+ +.+|++++.||.|++|++.+++....+..+.. .|.+++|+|++++|++++.|+.
T Consensus 19 ~~gh~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKL---------GISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp ECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSS---------CEEEEEECTTSSEEEEEETTSE
T ss_pred EcccCCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcccchhhccCCC---------ceEEEEEcCCCCEEEEECCCCE
Confidence 3789999999999999 99999999999999999999888776654433 2999999999999999999999
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS 219 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (396)
|++||++++.... ....+...|.+++|+| ++++|++++.|+.|++||+++.+....+ ..|..+|.+++|+|++.
T Consensus 89 i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 89 LKIWDVSSGKCLK---TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTL--PAHSDPVSAVHFNRDGS 162 (312)
T ss_dssp EEEEETTTCCEEE---EEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEE---EEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEe--cCCCCcEEEEEEcCCCC
Confidence 9999999876443 3445666899999999 9999999999999999999875443222 25888999999999999
Q ss_pred EEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc
Q 016032 220 KILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299 (396)
Q Consensus 220 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~ 299 (396)
+|++++.|+.|++||+++++..... ..........+.|+|+ +++++ +++.|+.|++||+.+
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~~~~~~-------~~~~~~~~~~~~~~~~---------~~~l~---~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPN---------GKYIL---AATLDNTLKLWDYSK 223 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEE-------CCSSCCCEEEEEECTT---------SSEEE---EEETTTEEEEEETTT
T ss_pred EEEEEeCCCcEEEEECCCCceeeEE-------eccCCCceEEEEECCC---------CCEEE---EEcCCCeEEEEECCC
Confidence 9999999999999999887653211 0111112235789998 77777 789999999999999
Q ss_pred cchhhhhcCCCCCCCcceeee-ccCCcEEEeec-CCcEEEEcCCCcceeeeccccceEEEe
Q 016032 300 GQLVAEVMDPNITTISPVNKL-HPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMKIIVC 358 (396)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~~~~~ 358 (396)
++.+..+.++..........+ .+++.+|++|+ ||.|++||+.+++.+..+.+|...+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 284 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 284 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEE
Confidence 998888877753322221134 46789999999 999999999999999999988776554
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.4e-38 Score=281.01 Aligned_cols=285 Identities=11% Similarity=0.052 Sum_probs=223.2
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.+++++|+|++ ++|++|+.||.|++||+.+......+ ..| ..+....|+|+ +.+|++++.||.|++||+.+++...
T Consensus 58 ~~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 58 AGKGNTFEKVG-SHLYKARLDGHDFLFNTIIRDGSKML-KRA-DYTAVDTAKLQ-MRRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp CCTTCEEEEEE-TTEEEEEETTEEEEEECCSEETTTTS-CSC-CEEEEEEECSS-SCEEEEEETTSCEEEECTTSCEEEE
T ss_pred cccceeeeecC-CeEEEEEcCCcEEEEEecccceeeEE-ecC-CceEEEEEecC-CCEEEEEECCCCEEEEeCCCcceee
Confidence 45589999999 57999999999999999887765554 334 44555577888 8999999999999999999887766
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 181 (396)
.+..+.. .|.+++|+|++++|++++.|+.|++||+.+++... ....|...|.+++|+| ++.+|++++
T Consensus 134 ~~~~h~~---------~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~---~~~~h~~~v~~~~~~~-~~~~l~s~~ 200 (420)
T 3vl1_A 134 IDQAHVS---------EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR---TLIGHRATVTDIAIID-RGRNVLSAS 200 (420)
T ss_dssp ETTSSSS---------CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE---EEECCSSCEEEEEEET-TTTEEEEEE
T ss_pred ecccccC---------ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce---EEcCCCCcEEEEEEcC-CCCEEEEEc
Confidence 5543332 39999999999999999999999999999876553 3345667899999999 999999999
Q ss_pred CCCcEEEEecCCCCCCCccccC-CCC---------------------CceeEEEEcCCCCEEEEEeCCCcEEEEEccccc
Q 016032 182 NDHFARIWDIRRLEAGSSLCDL-PHK---------------------RVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGN 239 (396)
Q Consensus 182 ~d~~i~~wd~~~~~~~~~~~~~-~~~---------------------~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 239 (396)
.|+.|++||+++.+....+... .+. ..+.+++|+|++++|++++.||.|++||+++++
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999999876544333321 233 444555568899999999999999999998876
Q ss_pred ccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee-eeeeecccccccceEEEEcCccch-hhhhcCCCCCCCcce
Q 016032 240 LDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR-YISENYNGAALHPIDFIDITTGQL-VAEVMDPNITTISPV 317 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~d~~i~vwd~~~~~~-~~~~~~~~~~~i~~~ 317 (396)
..... ..........+.|+|+ +. +++ +|+.|+.|++||+.+++. +..+..++...+..+
T Consensus 281 ~~~~~-------~~~~~~~v~~~~~~~~---------~~~~l~---~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 281 QTIQL-------PSKFTCSCNSLTVDGN---------NANYIY---AGYENGMLAQWDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp EEEEE-------CCTTSSCEEEEEECSS---------CTTEEE---EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE
T ss_pred eeEEc-------ccccCCCceeEEEeCC---------CCCEEE---EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE
Confidence 42211 1111223457899998 55 666 789999999999998754 677777666777766
Q ss_pred eeeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 318 NKLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 318 ~~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
+.+++++|++++ |+.|++|++...+
T Consensus 342 --~~~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 342 --YFAAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp --EEETTEEEEEETTTEEEEEEEECCTT
T ss_pred --EeCCCCEEEEecCCccEEEEeccCCC
Confidence 556889999999 9999999988743
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5e-38 Score=270.48 Aligned_cols=300 Identities=14% Similarity=0.175 Sum_probs=233.9
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
|.++|.+++|+|+| ++++++..++.+.+|........... .+|...|.+++|+|+ +.+|++++ ||.|++|++.++.
T Consensus 8 ~~~~v~~~~~s~dg-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~-~~~l~~~~-dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 8 GSKPAYSFHVTADG-QMQPVPFPPDALIGPGIPRHARQINT-LNHGEVVCAVTISNP-TRHVYTGG-KGCVKVWDISHPG 83 (337)
T ss_dssp EEEECCEEEECSSS-CEEECCCCTTSSSSTTCCSEEEEEEE-ECCSSCCCEEEECSS-SSEEEEEC-BSEEEEEETTSTT
T ss_pred cCCceeEEEECCCC-CEEEeecCCCcEeccccCCcccccee-ccCCCceEEEEEecC-CcEEEEcC-CCeEEEEECCCCC
Confidence 66789999999999 67888877777777776655444444 369999999999999 89999998 9999999998876
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
....+.... ...+...+.+++|+|++++|++++.+|.|++||+..+... .......+...+.+++|+| ++.+++
T Consensus 84 ~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~l~ 157 (337)
T 1gxr_A 84 NKSPVSQLD----CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAELTSSAPACYALAISP-DSKVCF 157 (337)
T ss_dssp CCSCSEEEE----CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEEECSSSCEEEEEECT-TSSEEE
T ss_pred ceeeeeccc----ccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeecccCCCceEEEEECC-CCCEEE
Confidence 443332100 0011134999999999999999999999999999886532 1223455666899999999 999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCC
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT 258 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 258 (396)
+++.|+.|++||+++.+....+ ..|...|.+++|+|++.+|++++.|+.|++||+++++.... +.....
T Consensus 158 ~~~~dg~v~~~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~---------~~~~~~ 226 (337)
T 1gxr_A 158 SCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ---------HDFTSQ 226 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---------EECSSC
T ss_pred EEeCCCcEEEEeCCCCceeeee--ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEee---------ecCCCc
Confidence 9999999999999875443332 25888999999999999999999999999999998765321 111223
Q ss_pred ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEE
Q 016032 259 PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFI 337 (396)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~i 337 (396)
...+.|+|+ +++++ +++.++.|++||+.+++.. .+..|. ..+..+ +|+|++++|++++ ||.|++
T Consensus 227 v~~~~~s~~---------~~~l~---~~~~~~~i~~~~~~~~~~~-~~~~~~-~~v~~~-~~~~~~~~l~~~~~dg~i~~ 291 (337)
T 1gxr_A 227 IFSLGYCPT---------GEWLA---VGMESSNVEVLHVNKPDKY-QLHLHE-SCVLSL-KFAYCGKWFVSTGKDNLLNA 291 (337)
T ss_dssp EEEEEECTT---------SSEEE---EEETTSCEEEEETTSSCEE-EECCCS-SCEEEE-EECTTSSEEEEEETTSEEEE
T ss_pred eEEEEECCC---------CCEEE---EEcCCCcEEEEECCCCCeE-EEcCCc-cceeEE-EECCCCCEEEEecCCCcEEE
Confidence 357889998 66777 6788999999999887754 344444 678888 8999999999999 999999
Q ss_pred EcCCCcceeeeccccce
Q 016032 338 WRPKEKSELVEQKEEMK 354 (396)
Q Consensus 338 w~~~~~~~~~~~~~~~~ 354 (396)
|++.+++.+........
T Consensus 292 ~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 292 WRTPYGASIFQSKESSS 308 (337)
T ss_dssp EETTTCCEEEEEECSSC
T ss_pred EECCCCeEEEEecCCCc
Confidence 99999988765544333
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=287.26 Aligned_cols=294 Identities=15% Similarity=0.112 Sum_probs=206.7
Q ss_pred eeeccccCCeEEEEecCCC-----CcEEEEEeCCCcEEEeecccceee----------eEecCCcccceeEEEEecCCCc
Q 016032 14 AVIRYHSRRVTCLEFHPTN-----NHILLSGDKKGQVGVWDFYKVSEK----------IVYGNIHSCIVNNIRFNPTNDG 78 (396)
Q Consensus 14 ~~~~~h~~~v~~~~~~~~~-----~~~l~s~~~dg~i~iwd~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~ 78 (396)
..+.+|.+.|.+++|+|++ ..+||+|+.||+|+|||+.++... .....+|...|.+++|+|+ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~ 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--T 278 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--S
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--C
Confidence 4567889999999999971 258999999999999999765321 1123679999999999985 4
Q ss_pred EEEEEeCCCeEEEEECCCCcc-cceeecCCCCCCCCCcceeeeEE--EeCCCC-CEEEEEecCCeEEEEeCCCCCCCccc
Q 016032 79 TVYAASSDGTVSCTDLETGLA-LSLMNVNPNGWHGPRTWRMLYGM--DINPEK-GVVLVADNFGFLYLVDARTNSRSGEA 154 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~g~i~i~d~~~~~~~~~~ 154 (396)
.|++|+.||+|++||++++.. ...+..+.. .|.++ +|+|++ .+|++++.|+.|++||+++++.....
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~---------~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS---------YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSS---------CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccc---------cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 899999999999999997643 333443332 28888 678887 89999999999999999886544322
Q ss_pred eeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEE
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 234 (396)
..+.....+.+++|+| ++..+++++.|++|++||+++......+ .+|.+.|++++|+|++++|++|+.|++|++||
T Consensus 350 -~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l--~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 350 -VSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPL--VSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp -EEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEE--EECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred -ccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceee--ecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 2333323578999999 8999999999999999999875543333 26999999999999999999999999999999
Q ss_pred cccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC-ccchhhhhcCCCCCC
Q 016032 235 SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT-TGQLVAEVMDPNITT 313 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~-~~~~~~~~~~~~~~~ 313 (396)
+..+ ....... ............++|+|+. ..+. ... .+.+|+.. ++.++..+.+|. ..
T Consensus 426 ~~~~-~~~~~~~---~~~~~~~~~v~~v~~sp~g---------~~~~----~~~--~~~~~~~~~~g~~~~~l~gh~-~~ 485 (524)
T 2j04_B 426 AARR-LLHGIKN---SSATQKSLRLWKWDYSIKD---------DKYR----IDS--SYEVYPLTVNDVSKAKIDAHG-IN 485 (524)
T ss_dssp SCSS-TTTCC---------CCCCEEEECBCCSSS---------CEEE----ECC--CCCCCC-------------CC-CS
T ss_pred chHh-hcccccc---CccceeeeEEEEeccCCCC---------CeEE----ccC--CceecccccCCcceeeecCCC-ce
Confidence 8654 2111000 0000111112367788873 2221 111 12333332 567777787776 78
Q ss_pred CcceeeeccCCc---EEEeec-CCcEEEEcCCCc
Q 016032 314 ISPVNKLHPRDD---VLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 314 i~~~~~~~~~~~---~l~sg~-d~~i~iw~~~~~ 343 (396)
|.+| +|+|++. +||+|+ ||.|+||++.-.
T Consensus 486 V~~V-afsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 486 ITCT-KWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCCE-EECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEEE-ECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 8999 9999964 999999 899999997643
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-38 Score=314.17 Aligned_cols=317 Identities=18% Similarity=0.216 Sum_probs=254.4
Q ss_pred CCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecC-CCcEEEE
Q 016032 4 AHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT-NDGTVYA 82 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s 82 (396)
.|++.++..+..+.+|.+.|.+++|+|++ ++|++|+.||.|+|||+.++.....+ .+|...|.+++|+|+ +..++++
T Consensus 641 vw~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s 718 (1249)
T 3sfz_A 641 VFKAETGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGKLVHTY-DEHSEQVNCCHFTNKSNHLLLAT 718 (1249)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSCCEEEE
T ss_pred EEECCCCCEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCceEEEE-cCCCCcEEEEEEecCCCceEEEE
Confidence 37788888899999999999999999999 68999999999999999998887777 679999999999995 1568999
Q ss_pred EeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccce-------
Q 016032 83 ASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAI------- 155 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~------- 155 (396)
++.|+.|++||+.+++....+..+.. .|.+++|+|+++++++++.||.|++||+.++.......
T Consensus 719 g~~d~~v~vwd~~~~~~~~~~~~h~~---------~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~ 789 (1249)
T 3sfz_A 719 GSNDFFLKLWDLNQKECRNTMFGHTN---------SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLS 789 (1249)
T ss_dssp EETTSCEEEEETTSSSEEEEECCCSS---------CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--
T ss_pred EeCCCeEEEEECCCcchhheecCCCC---------CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccc
Confidence 99999999999999988877754433 29999999999999999999999999987653211100
Q ss_pred ---------------------------------------------eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEe
Q 016032 156 ---------------------------------------------LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWD 190 (396)
Q Consensus 156 ---------------------------------------------~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd 190 (396)
....+...+.+++|+| ++.++++++.|+.|++||
T Consensus 790 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQYCVELWN 868 (1249)
T ss_dssp ------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSSCEEEEE
T ss_pred cCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEE
Confidence 0113456788999999 999999999999999999
Q ss_pred cCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee----------------------
Q 016032 191 IRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV---------------------- 248 (396)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------------------- 248 (396)
+.+......+ .+|...|.+++|+|++.+|++++.|+.|++|++.+...........
T Consensus 869 ~~~~~~~~~~--~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1249)
T 3sfz_A 869 IDSRLKVADC--RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGL 946 (1249)
T ss_dssp TTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSE
T ss_pred cCCCceeeec--CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcce
Confidence 9865442222 3689999999999999999999999999999987543221110000
Q ss_pred ---e----cccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeec
Q 016032 249 ---H----SHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLH 321 (396)
Q Consensus 249 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 321 (396)
. ............++|+|+ |++++ +|+.+|.|++|++.+++....+.+|. ..+.++ +|+
T Consensus 947 ~~~~~~~~~~~~~~~~~i~~~~~sp~---------g~~l~---~g~~~g~i~i~d~~~~~~~~~~~~h~-~~v~~l-~~s 1012 (1249)
T 3sfz_A 947 QLIAGKTGQIDYLPEAQVSCCCLSPH---------LEYVA---FGDEDGAIKIIELPNNRVFSSGVGHK-KAVRHI-QFT 1012 (1249)
T ss_dssp EEEEESSCCEEEECCSCEEEEEECTT---------SSEEE---EEETTSCCEEEETTTTSCEEECCCCS-SCCCCE-EEC
T ss_pred EEEecCcceEEEcccCcEEEEEEcCC---------CCEEE---EEcCCCCEEEEEcCCCceeeecccCC-CceEEE-EEC
Confidence 0 000001112345778887 77777 78999999999999999888887776 788888 899
Q ss_pred cCCcEEEeec-CCcEEEEcCCCcceeee
Q 016032 322 PRDDVLASGS-SRSIFIWRPKEKSELVE 348 (396)
Q Consensus 322 ~~~~~l~sg~-d~~i~iw~~~~~~~~~~ 348 (396)
|++++|++++ ||.|++|++.+++....
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 9999999999 99999999999876543
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=267.89 Aligned_cols=266 Identities=15% Similarity=0.218 Sum_probs=198.9
Q ss_pred eccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEE
Q 016032 16 IRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93 (396)
Q Consensus 16 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 93 (396)
..+|.+.|.+++|+|++ ++|++|+.|+.|+||++.... ....+ .+|...|.+++|+|+ +.+|++++.|++|++||
T Consensus 57 ~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPS-GNLLATCSRDKSVWVWE 133 (345)
T ss_dssp CSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-EEEEEEE-CCCSSCEEEEEECTT-SSEEEEEETTSCEEEEE
T ss_pred ccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCeEEEEEc-cCCCCCceEEEEeCC-CCEEEEEECCCeEEEEE
Confidence 47899999999999999 689999999999999998764 33334 789999999999999 99999999999999999
Q ss_pred CCCCcccc---eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEec
Q 016032 94 LETGLALS---LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCN 170 (396)
Q Consensus 94 ~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 170 (396)
+.++.... .+..+. ..|.+++|+|++.+|++++.|+.|++||++..... .......|...|.+++|+
T Consensus 134 ~~~~~~~~~~~~~~~h~---------~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~-~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHT---------QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV-CCATLEGHESTVWSLAFD 203 (345)
T ss_dssp ECTTSCEEEEEEECCCC---------SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEEC
T ss_pred CCCCCCeEEEEEecCcC---------CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE-EEEEecCCCCceEEEEEC
Confidence 98765432 222222 23999999999999999999999999998875422 112345566789999999
Q ss_pred cCCCCEEEEeeCCCcEEEEecCCCCCCCc------------cccC--CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 016032 171 PIQPELLLSCGNDHFARIWDIRRLEAGSS------------LCDL--PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 171 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~------------~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
| ++.+|++++.|++|++|+......... +..+ .|...|.+++|+|++..|++++.|+.|++|+..
T Consensus 204 p-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 204 P-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp T-TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred C-CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 9 999999999999999999754322111 1111 278899999999999999999999999999998
Q ss_pred cccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 237 FGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
.+.................|.. ...++|+|+. ..+++ +|+.||.|++|++.+++....+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~--------~~~la---S~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 283 PNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE--------PGLLA---SCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp TTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS--------TTEEE---EEETTSCEEEEEECC-------
T ss_pred CCCCcceeeEEEEeeecccccCcEeEeEEeCCC--------ceEEE---EcCCCCcEEEEEecCCCCcccc
Confidence 6543221111111111222332 3578999973 23566 7899999999999888765543
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.9e-37 Score=267.57 Aligned_cols=293 Identities=13% Similarity=0.145 Sum_probs=226.7
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce---eeeEecCCcccceeEEEEecCCCc-EEEEEeCCCe
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDG-TVYAASSDGT 88 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~ 88 (396)
+....+|.+.|++++|+|++ .+|++++.||.|+||++.+.. ..... .+|...|.+++|+|+ +. +|++++.||.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHPLLCCNFIDN-TDLQIYVGTVQGE 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEEEEEE-EECSSCEEEEEEEES-SSEEEEEEETTSC
T ss_pred eecccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCccccceee-eecCCceEEEEECCC-CCcEEEEEcCCCe
Confidence 34556899999999999998 689999999999999998766 12222 469999999999999 89 9999999999
Q ss_pred EEEEEC-CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCC---------CCCCccceeee
Q 016032 89 VSCTDL-ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDART---------NSRSGEAILIH 158 (396)
Q Consensus 89 v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~---------~~~~~~~~~~~ 158 (396)
|++||+ .+++. ..+... .+...|.+++|+| +..+++++.++.|++||+++ .......
T Consensus 81 i~~wd~~~~~~~-~~~~~~-------~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 147 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNN-------EANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT---- 147 (342)
T ss_dssp EEEECSSSSSSE-EECBSC-------CCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS----
T ss_pred EEEEEeccCCce-Eecccc-------CCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE----
Confidence 999999 87755 333220 0112399999999 99999999999999999987 5544322
Q ss_pred cCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCC-CCCCCccccCCCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEcc
Q 016032 159 RKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR-LEAGSSLCDLPHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 236 (396)
.+...+.+++|+| ++ +++++.++.|++||+++ ...........+...|.+++|+| ++.+|++++.||.|++|+++
T Consensus 148 ~~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 148 KVKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp SSCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred eeCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 2556899999998 54 99999999999999987 44433333346788999999999 99999999999999999998
Q ss_pred cc--cccCCCcceeecccc-----cccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC
Q 016032 237 FG--NLDSPSREIVHSHDF-----NRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 237 ~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
.. ............+.. ........+.|+|+ +++++ +|+.||.|++||+.+++.+..+..|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---------~~~l~---~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR---------HKFLY---TAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT---------TCCEE---EEETTSCEEEEETTTTEEEEECCCC
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCC---------CCEEE---EecCCceEEEEcCccHhHhhhhhcc
Confidence 76 110011111111110 00113457889997 67777 7889999999999999999998887
Q ss_pred CCCCCcceeeeccCCcEEEeec-CCc-EEEEc
Q 016032 310 NITTISPVNKLHPRDDVLASGS-SRS-IFIWR 339 (396)
Q Consensus 310 ~~~~i~~~~~~~~~~~~l~sg~-d~~-i~iw~ 339 (396)
+...+.++ + |++++|++|+ ||. .+.|.
T Consensus 293 h~~~v~~~-~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 NEDSVVKI-A--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSSEEEEE-E--ECSSEEEEEEECTHHHHCSS
T ss_pred cCCCceEe-c--CCCCeEEEEecCCccccccc
Confidence 45778877 4 9999999999 998 55555
No 61
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.9e-38 Score=274.66 Aligned_cols=281 Identities=14% Similarity=0.157 Sum_probs=219.8
Q ss_pred CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEE
Q 016032 43 GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122 (396)
Q Consensus 43 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 122 (396)
..+..|+.........+ .+|...|++++|+|+ +.+|++|+.|++|++||+.+++....+..+... |.++
T Consensus 46 ~~~~~~~~~~~~~~~~l-~gH~~~V~~~~~sp~-~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~---------v~~~ 114 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTL-QGHSGKVYSLDWTPE-KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW---------VMEC 114 (380)
T ss_dssp GGCCCCCCCCCEEEEEE-CCCSSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECCCTT---------CCCC
T ss_pred ccccccccceeEEeecc-cccccEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCccceEEecCCCC---------EEEE
Confidence 34556776666666666 789999999999999 999999999999999999999888877665443 8899
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCC----ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCC
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRS----GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS 198 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 198 (396)
+|+|++++|++|+.|+.+++|++...... ........|...+.++.|.|..+..|++|+.|++|++||+++++...
T Consensus 115 ~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~ 194 (380)
T 3iz6_a 115 AFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRIS 194 (380)
T ss_dssp EECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEE
T ss_pred EECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEE
Confidence 99999999999999999999999753211 11122345666899999999556789999999999999998765433
Q ss_pred cccc---CCCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEcccc-cccCCCcceeecccccccC-CceeEEeCCCCCCCc
Q 016032 199 SLCD---LPHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIFG-NLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSES 272 (396)
Q Consensus 199 ~~~~---~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 272 (396)
.+.. .+|...|.+++|++ ++.+|++|+.|+.|++||++.. +... .+.++. ....+.|+|+
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~---------~~~~h~~~v~~v~~~p~----- 260 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR---------TYHGHEGDINSVKFFPD----- 260 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE---------EECCCSSCCCEEEECTT-----
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE---------EECCcCCCeEEEEEecC-----
Confidence 3211 26888999999987 8899999999999999999743 2211 112222 2347899998
Q ss_pred eeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCC------CCCcceeeeccCCcEEEeec-CCcEEEEcCCCcce
Q 016032 273 LAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNI------TTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSE 345 (396)
Q Consensus 273 ~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~ 345 (396)
|++++ +|+.|++|++||+.+++.+..+..+.. ..+.++ +|+|+|++|++|+ ||.|++||+.+++.
T Consensus 261 ----~~~l~---s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 261 ----GQRFG---TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSV-AFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ----SSEEE---EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEE-EECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred ----CCeEE---EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEE-EECCCCCEEEEEECCCCEEEEECCCCce
Confidence 77777 899999999999999988776654321 236666 8999999999999 99999999999887
Q ss_pred eeec----cccceEE
Q 016032 346 LVEQ----KEEMKII 356 (396)
Q Consensus 346 ~~~~----~~~~~~~ 356 (396)
+..+ .+|...+
T Consensus 333 ~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRI 347 (380)
T ss_dssp EEEECCSCSSCCCCC
T ss_pred EEEEecccCCCCCce
Confidence 7665 4455433
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=268.84 Aligned_cols=306 Identities=12% Similarity=0.091 Sum_probs=230.9
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCC--CcEEEEEeCCCcEEEeeccc-ceeeeEecCCcccceeEEEEecCCCcEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTN--NHILLSGDKKGQVGVWDFYK-VSEKIVYGNIHSCIVNNIRFNPTNDGTVY 81 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 81 (396)
+.......+..+++|.+.|++++|+|++ ..+|++|+.||.|+|||+.+ +........+|...|.+++|+|+ +.+|+
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD-GSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT-SSEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC-CCEEE
Confidence 4455566778899999999999999993 37899999999999999997 44443444679999999999998 99999
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEe--CCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDI--NPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR 159 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~ 159 (396)
+++.||.|++||+.+++...... +. ..|.+++| +|++.+|++++.||.|++||+++++..... .
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~-~~---------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~- 168 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQ-HD---------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL---Q- 168 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CS---------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE---E-
T ss_pred EEcCCCcEEEEEcCCCCceeecc-cc---------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE---e-
Confidence 99999999999999988766432 22 23999999 999999999999999999999987655322 2
Q ss_pred CCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCE----EEEEeCCCcEEEEEc
Q 016032 160 KGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSK----ILTTSQDNRLRIWDS 235 (396)
Q Consensus 160 ~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----l~~~~~d~~i~iwd~ 235 (396)
....+.++.+.+ ..+++++.++.+++|+++............+...+.++++.++... +++++.||.|++||+
T Consensus 169 ~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 169 LPERCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp CSSCEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred cCCCceEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 223577777765 5788888999999999986443222222234455667777665554 999999999999999
Q ss_pred ccccccCCCcceeeccc------cccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcC
Q 016032 236 IFGNLDSPSREIVHSHD------FNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD 308 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~ 308 (396)
+................ ...+ .....+.|+|+ |++++ +|+.|+.|++||+.+++++..+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------~~~l~---s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV---------HGTLA---TVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTT---------TCCEE---EEETTSCEEEEETTTTEEEEECCC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecC---------CCEEE---EEccCCeEEEEECCCCcEEEEecC
Confidence 87642111111100000 0000 12457899998 77777 789999999999999999988887
Q ss_pred CCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCC
Q 016032 309 PNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKE 342 (396)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~ 342 (396)
|. ..+.++ +|+|+|++|++|+ |+..+.|++-+
T Consensus 314 ~~-~~v~~~-~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 314 LD-QPISAC-CFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp CS-SCEEEE-EECTTSSCEEEEECCCSTTCGGGCC
T ss_pred CC-CCceEE-EECCCCCeEEEEecccccccccccC
Confidence 65 788888 8999999999998 77666655443
No 63
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-37 Score=269.28 Aligned_cols=267 Identities=16% Similarity=0.176 Sum_probs=204.9
Q ss_pred CCCCCccceeeeccccC------------------CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccc
Q 016032 5 HVIPDQVNCAVIRYHSR------------------RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCI 66 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 66 (396)
|.+.++..+..+.+|.. .|.+++|+|++ ++|++|+.|+.|+|||+.+++....+ .+|...
T Consensus 90 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~~~~~~-~~h~~~ 167 (393)
T 1erj_A 90 YRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMIL-QGHEQD 167 (393)
T ss_dssp EETTTCCEEEEECC-----------------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEE-CCCSSC
T ss_pred EEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEE-ccCCCC
Confidence 45555555666665542 49999999999 68999999999999999988877766 789999
Q ss_pred eeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeC
Q 016032 67 VNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDA 145 (396)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~ 145 (396)
|.+++|+|+ +.+|++++.|++|++||+++++....+.... .+.+++|+| ++.+|++++.|+.|++||+
T Consensus 168 v~~~~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 168 IYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCSLTLSIED----------GVTTVAVSPGDGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp EEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECSS----------CEEEEEECSTTCCEEEEEETTSCEEEEET
T ss_pred EEEEEEcCC-CCEEEEecCCCcEEEEECCCCeeEEEEEcCC----------CcEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 999999999 8999999999999999999988776665332 288999999 8999999999999999999
Q ss_pred CCCCCCccce----eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC---------Ccc-ccCCCCCceeE
Q 016032 146 RTNSRSGEAI----LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG---------SSL-CDLPHKRVVNS 211 (396)
Q Consensus 146 ~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~---------~~~-~~~~~~~~i~~ 211 (396)
+++....... ....|...|.+++|+| ++.+|++++.|+.|++||+++.... ... ...+|...|.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 315 (393)
T 1erj_A 237 ETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 315 (393)
T ss_dssp TTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEE
T ss_pred CCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEE
Confidence 8865443221 1134566899999999 9999999999999999999764321 111 12268899999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeeccccccc
Q 016032 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALH 290 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~ 290 (396)
++|+|++.+|++|+.|+.|++||+.+++... .+.+|.. ...+.|++.. .+...+.+++ +|+.|+
T Consensus 316 ~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~---------~l~~h~~~v~~v~~~~~~---~~~p~~~~l~---sgs~Dg 380 (393)
T 1erj_A 316 VATTQNDEYILSGSKDRGVLFWDKKSGNPLL---------MLQGHRNSVISVAVANGS---SLGPEYNVFA---TGSGDC 380 (393)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEEE---------EEECCSSCEEEEEECSSC---TTCTTCEEEE---EEETTS
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCeEEE---------EECCCCCCEEEEEecCCc---CcCCCCCEEE---EECCCC
Confidence 9999999999999999999999999876532 1122222 2466776631 1111266777 899999
Q ss_pred ceEEEEcCcc
Q 016032 291 PIDFIDITTG 300 (396)
Q Consensus 291 ~i~vwd~~~~ 300 (396)
.|++|++...
T Consensus 381 ~i~iW~~~~~ 390 (393)
T 1erj_A 381 KARIWKYKKI 390 (393)
T ss_dssp EEEEEEEEEC
T ss_pred cEEECccccc
Confidence 9999998643
No 64
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.8e-37 Score=263.89 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=208.4
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc------eeeeEecCCcccceeEEEEecCCCc
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV------SEKIVYGNIHSCIVNNIRFNPTNDG 78 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~ 78 (396)
|+..+......+..|...|.+++|+|++ .+|++|+.|+.+++|++... .....+ .+|...|.+++|+|+ +.
T Consensus 91 Wd~~~~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~-~~ 167 (354)
T 2pbi_B 91 WDSFTTNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNENMAAKKKSV-AMHTNYLSACSFTNS-DM 167 (354)
T ss_dssp EETTTCCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCCSGGGCEEE-EECSSCEEEEEECSS-SS
T ss_pred EECCCCCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEeccccccccccceee-eccCCcEEEEEEeCC-CC
Confidence 6677777788899999999999999999 68999999999999998643 122223 569999999999999 89
Q ss_pred EEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC--CCCEEEEEecCCeEEEEeCCCCCCCcccee
Q 016032 79 TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP--EKGVVLVADNFGFLYLVDARTNSRSGEAIL 156 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~ 156 (396)
.|++++.|++|++||+++++.+..+..+... +.+++++| ++++|++|+.||.|++||++++.... .
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~---~ 235 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHGHGAD---------VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ---A 235 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSC---------EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE---E
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC---------eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE---E
Confidence 9999999999999999999988877654433 88888877 57899999999999999999876432 3
Q ss_pred eecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 016032 157 IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
...|...|.+++|+| ++.+|++++.|++|++||++.......+....+...+.+++|+|++.+|++|+.|+.|++||+.
T Consensus 236 ~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 236 FETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 345666899999999 9999999999999999999865443333222344578999999999999999999999999998
Q ss_pred cccccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEE
Q 016032 237 FGNLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFID 296 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd 296 (396)
+++.... +.++. ....+.|+|+ |++++ +|+.|+.|++|+
T Consensus 315 ~~~~~~~---------l~~h~~~v~~l~~spd---------g~~l~---sgs~D~~v~vW~ 354 (354)
T 2pbi_B 315 KGSRVSI---------LFGHENRVSTLRVSPD---------GTAFC---SGSWDHTLRVWA 354 (354)
T ss_dssp TCSEEEE---------ECCCSSCEEEEEECTT---------SSCEE---EEETTSEEEEEC
T ss_pred CCceEEE---------EECCCCcEEEEEECCC---------CCEEE---EEcCCCCEEecC
Confidence 7764321 12222 2357899998 78888 899999999996
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-37 Score=267.30 Aligned_cols=265 Identities=15% Similarity=0.175 Sum_probs=206.6
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecc--cceeeeEecCCcccceeEEEEecCC-CcEEEEEeCCC
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFY--KVSEKIVYGNIHSCIVNNIRFNPTN-DGTVYAASSDG 87 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg 87 (396)
..+..+++|.+.|++++|+|++ .+|++|+.||.|+|||+. +......+ .+|...|.+++|+|+. +.+|++++.||
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3567899999999999999999 689999999999999998 44444444 6899999999998642 68999999999
Q ss_pred eEEEEECCCCc--ccceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCcc
Q 016032 88 TVSCTDLETGL--ALSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSK 163 (396)
Q Consensus 88 ~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 163 (396)
.|++||+.+++ ....+..+. ..+.+++|+|+ +.++++++.++.|++||++....... .....+...
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~~~ 149 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHS---------ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIG 149 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS---------SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-EEEECCTTC
T ss_pred EEEEEEcCCCceeEeeeecCCC---------cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-EEecCCCCc
Confidence 99999999886 333333222 23999999999 99999999999999999998754332 244556678
Q ss_pred EEEEEeccC------------CCCEEEEeeCCCcEEEEecCCCCCCC-cccc-CCCCCceeEEEEcCC---CCEEEEEeC
Q 016032 164 VVGLHCNPI------------QPELLLSCGNDHFARIWDIRRLEAGS-SLCD-LPHKRVVNSAYFSPS---GSKILTTSQ 226 (396)
Q Consensus 164 i~~~~~~~~------------~~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~-~~~~~~i~~~~~~~~---~~~l~~~~~ 226 (396)
|.+++|+|. ++.+|++++.|+.|++||+++..... .... ..|...|.+++|+|+ +.+|++++.
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 999999994 48999999999999999998654321 1222 268899999999999 899999999
Q ss_pred CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 227 DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 227 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
||.|++||++++.... . . .+...
T Consensus 230 dg~i~iwd~~~~~~~~----------------------------------~--------------~---------~~~~~ 252 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPW----------------------------------K--------------K---------TLLKE 252 (379)
T ss_dssp TSCEEEEEESSTTSCC----------------------------------E--------------E---------EESSS
T ss_pred CCEEEEEeCCCCCccc----------------------------------e--------------e---------eeecc
Confidence 9999999997643200 0 0 00011
Q ss_pred cCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCccee
Q 016032 307 MDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSEL 346 (396)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~ 346 (396)
.. +...+.++ +|+|++++|++++ ||.|++|++..+...
T Consensus 253 ~~-~~~~v~~~-~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 253 EK-FPDVLWRA-SWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp SC-CSSCEEEE-EECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred cc-CCCcEEEE-EEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 11 22566777 8999999999988 999999999865443
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-36 Score=260.26 Aligned_cols=261 Identities=14% Similarity=0.167 Sum_probs=198.8
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.....+.+|...|.+++|+|++ .+|++|+.|++|++||+.++.....+ .+|...|.+++|+|+ +.+|++++.|++|+
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRF-VGHQSEVYSVAFSPD-NRQILSAGAEREIK 143 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCEEEEE-ECCCSCEEEEEECSS-TTEEEEEETTSCEE
T ss_pred cccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEE-cCCCCcEEEEEECCC-CCEEEEEcCCCEEE
Confidence 4467889999999999999998 68999999999999999998877776 679999999999999 99999999999999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCC----------CEEEEEecCCeEEEEeCCCCCCCccceeeecC
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK----------GVVLVADNFGFLYLVDARTNSRSGEAILIHRK 160 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~ 160 (396)
+||+..... ..... ...+. ..+.+++|+|++ .++++++.|+.|++||... . .......|
T Consensus 144 ~wd~~~~~~-~~~~~----~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~---~~~~~~~h 212 (343)
T 2xzm_R 144 LWNILGECK-FSSAE----KENHS--DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q---IRYTFKAH 212 (343)
T ss_dssp EEESSSCEE-EECCT----TTSCS--SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E---EEEEEECC
T ss_pred EEeccCCce-eeeec----ccCCC--ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-c---eeEEEcCc
Confidence 999974322 22110 01111 338999999986 7999999999999999543 1 22234556
Q ss_pred CccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 161 GSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
...|.+++|+| ++.+|++|+.|+.|++||++.... ....+.+...|.+++|+|++.+++++ .|+.|++||+.+++.
T Consensus 213 ~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 213 ESNVNHLSISP-NGKYIATGGKDKKLLIWDILNLTY--PQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTCEEEEEESSCCSS--CSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred cccceEEEECC-CCCEEEEEcCCCeEEEEECCCCcc--cceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence 67899999999 999999999999999999954332 22223355679999999999887755 578899999987764
Q ss_pred cC--CCcc--eeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 241 DS--PSRE--IVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 241 ~~--~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
.. .... ........++. ....++|+|+ |++++ +|+.||.|++|++.++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------g~~l~---sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 289 APVCTIEAEPITKAEGQKGKNPQCTSLAWNAL---------GKKLF---AGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CSEEECCCCSGGGBTTBCCSCCCEEEEEECSS---------SCCEE---EEETTSEEEEEEEEEEE
T ss_pred CceEEeecCcchhhhhhcCCCCceEEEEECCC---------CCeEE---EecCCceEEEEEEEccC
Confidence 32 1100 00000111222 2357899998 77887 79999999999987764
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-37 Score=292.95 Aligned_cols=212 Identities=17% Similarity=0.181 Sum_probs=173.9
Q ss_pred eeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEE
Q 016032 14 AVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93 (396)
Q Consensus 14 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 93 (396)
....+|.+.|++++|+|++ ++||+|+.||.|+||+..+.+..... .|...|.+++|+| +.+|++++.|++|++||
T Consensus 11 ~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~~~~~--~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEVVIKL--EDRSAIKEMRFVK--GIYLVVINAKDTVYVLS 85 (902)
T ss_dssp EEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEEEEEC--SSCCCEEEEEEET--TTEEEEEETTCEEEEEE
T ss_pred ccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEEEEEc--CCCCCEEEEEEcC--CCEEEEEECcCeEEEEE
Confidence 3456899999999999999 68999999999999999877665544 3888999999999 45999999999999999
Q ss_pred CCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccc--------eeeecCCccEE
Q 016032 94 LETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEA--------ILIHRKGSKVV 165 (396)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~--------~~~~~~~~~i~ 165 (396)
+.+++.+..+..+ ..|.+++|+|+++++++|+.||.|++||+.++...... .....|...|.
T Consensus 86 ~~~~~~~~~~~~~----------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~ 155 (902)
T 2oaj_A 86 LYSQKVLTTVFVP----------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIV 155 (902)
T ss_dssp TTTCSEEEEEECS----------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCC
T ss_pred CCCCcEEEEEcCC----------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeE
Confidence 9999887776422 13999999999999999999999999999886532100 11234566899
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc----------------CCCCCceeEEEEcCCCCEEEEEeCCCc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD----------------LPHKRVVNSAYFSPSGSKILTTSQDNR 229 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~l~~~~~d~~ 229 (396)
+++|+|.++..+++|+.|+.| +||+++.+....+.. ..|...|.+++|+|+|.+|++++.||.
T Consensus 156 sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe
Confidence 999999445789999999999 999987544322211 124578999999999999999999999
Q ss_pred EEEEEccccccc
Q 016032 230 LRIWDSIFGNLD 241 (396)
Q Consensus 230 i~iwd~~~~~~~ 241 (396)
|++||+++++.+
T Consensus 235 i~lWd~~~g~~~ 246 (902)
T 2oaj_A 235 LVFWDANSGHMI 246 (902)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCcEE
Confidence 999999988753
No 68
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-37 Score=294.38 Aligned_cols=324 Identities=11% Similarity=0.061 Sum_probs=225.0
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeee----------EecCCcccceeEEEEec
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI----------VYGNIHSCIVNNIRFNP 74 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----------~~~~~~~~~v~~~~~~~ 74 (396)
|++.++.++..+. |.+.|++++|+|++ .+|++|+.||.|++||+.+..... ....+|..+|.+++|+|
T Consensus 84 Wd~~~~~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 84 LSLYSQKVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EETTTCSEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EECCCCcEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 7777777777886 77899999999999 689999999999999998876431 12257999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCcccceeecCCCC--C-------CCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeC
Q 016032 75 TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNG--W-------HGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDA 145 (396)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~-------~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~ 145 (396)
++...|++|+.||.| +||+++++....+..+... . ....+...|.+++|+|++.+|++++.||.|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 745789999999999 9999999887766543100 0 00011234999999999999999999999999999
Q ss_pred CCCCCCcc--ce--eee-----------cCCccEEEEEeccC---C-CCEEEEee-------------------------
Q 016032 146 RTNSRSGE--AI--LIH-----------RKGSKVVGLHCNPI---Q-PELLLSCG------------------------- 181 (396)
Q Consensus 146 ~~~~~~~~--~~--~~~-----------~~~~~i~~~~~~~~---~-~~~l~~~~------------------------- 181 (396)
++++.... .. ..+ .+...|.+++|++. + +.++++|+
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 88654321 00 001 12235777777431 1 13444443
Q ss_pred ---------------------------------------------------CCCcEEEEecCCCCCCCc-----ccc---
Q 016032 182 ---------------------------------------------------NDHFARIWDIRRLEAGSS-----LCD--- 202 (396)
Q Consensus 182 ---------------------------------------------------~d~~i~~wd~~~~~~~~~-----~~~--- 202 (396)
.|+.|++||+.++..... ...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 344555555533211000 000
Q ss_pred -------------------------------CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecc
Q 016032 203 -------------------------------LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSH 251 (396)
Q Consensus 203 -------------------------------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 251 (396)
.+|...+.+++|+|++++|++|+.|++|++||+.++.+..+ .......
T Consensus 401 ~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~-~~~~~~l 479 (902)
T 2oaj_A 401 RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN-ASFEVNL 479 (902)
T ss_dssp TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT-BCEEEEH
T ss_pred CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC-ceEEeec
Confidence 02223344455678999999999999999999998854221 1000000
Q ss_pred ----cccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc--------------------------
Q 016032 252 ----DFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ-------------------------- 301 (396)
Q Consensus 252 ----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~-------------------------- 301 (396)
..........++|+|+ |++++ +|+.|++|+||++.+++
T Consensus 480 ~~~~~~~h~~~V~svafspd---------g~~LA---sgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAE---------TLELA---VSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTN 547 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETT---------TTEEE---EEETTSCEEEEEEEECCC---------------CCSCCGGGSS
T ss_pred hhhcCCCCCCceeEEEecCC---------CCeEE---EEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCc
Confidence 0011223457999998 88888 89999999999998763
Q ss_pred -------------------hhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceee
Q 016032 302 -------------------LVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELV 347 (396)
Q Consensus 302 -------------------~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~ 347 (396)
++..+.+|. ..|.++ +|+|+| +||+|+ |++|+|||+.++..+.
T Consensus 548 ~~~~~~~~~~~~~~~~g~~~~~~l~~h~-~~V~sv-afSpdG-~lAsgs~D~tv~lwd~~~~~~~~ 610 (902)
T 2oaj_A 548 GVLVDVRDRAPTGVRQGFMPSTAVHANK-GKTSAI-NNSNIG-FVGIAYAAGSLMLIDRRGPAIIY 610 (902)
T ss_dssp CSEEECGGGCCTTCSEEEEEEEEECCCS-CSEEEE-EECBTS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred cccccccccCCCCCCCccceeEEEEcCC-CcEEEE-EecCCc-EEEEEeCCCcEEEEECCCCeEEE
Confidence 234455554 788888 899999 999999 9999999998876653
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.5e-36 Score=268.94 Aligned_cols=287 Identities=19% Similarity=0.288 Sum_probs=226.6
Q ss_pred ccceeeeccccCCe-EEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCe
Q 016032 10 QVNCAVIRYHSRRV-TCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88 (396)
Q Consensus 10 ~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 88 (396)
......+.+|.+.| .|+.+ ++ .+|++|+.||.|++||+.+++....+ .+|...|.+++|+ +..+++++.||+
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~--~g-~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~---~~~l~s~~~dg~ 180 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQF--CG-NRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMR---DNIIISGSTDRT 180 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEE--ET-TEEEEEETTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEE---TTEEEEEETTSC
T ss_pred cceeEEecccCCCcEEEEEE--cC-CEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCEEEEEec---CCEEEEEeCCCe
Confidence 34567899999875 55555 56 58999999999999999998877776 6899999999998 469999999999
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
|++||+.+++.+..+..+.. .|.+++++ ++.+++++.||.|++||+.+++... ....+...+.+++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~---------~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~---~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTS---------TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLH---VLMGHVAAVRCVQ 246 (445)
T ss_dssp EEEEETTTTEEEEEECCCSS---------CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEE---EEECCSSCEEEEE
T ss_pred EEEEECCcCcEEEEECCCCC---------cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEE---EEcCCcccEEEEE
Confidence 99999999988877754433 28888884 6789999999999999999876543 3345666899999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
+ ++.++++++.|+.|++||+++.+....+ ..|...|.+++| ++.++++++.|+.|++||+++++.....
T Consensus 247 ~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~---- 315 (445)
T 2ovr_B 247 Y---DGRRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL---- 315 (445)
T ss_dssp E---CSSCEEEEETTSCEEEEEGGGTEEEEEE--CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEE----
T ss_pred E---CCCEEEEEcCCCEEEEEECCCCcEeEEe--cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEE----
Confidence 8 5688999999999999999875443332 268889999999 7889999999999999999987753211
Q ss_pred ecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC--CCCCCcceeeeccCCcE
Q 016032 249 HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP--NITTISPVNKLHPRDDV 326 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~ 326 (396)
..+... ...+...+.+++ +|+.|+.|++||+.+++.+..+..+ +...+.++ +| ++++
T Consensus 316 -----~~~~~~----------v~~~~~~~~~l~---~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~-~~--~~~~ 374 (445)
T 2ovr_B 316 -----TGHQSL----------TSGMELKDNILV---SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL-QF--NKNF 374 (445)
T ss_dssp -----CCCCSC----------EEEEEEETTEEE---EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE-EE--CSSE
T ss_pred -----cCCccc----------EEEEEEeCCEEE---EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE-EE--CCCE
Confidence 111111 112222355666 7899999999999999988888763 33556655 55 5789
Q ss_pred EEeec-CCcEEEEcCCCcceeeec
Q 016032 327 LASGS-SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 327 l~sg~-d~~i~iw~~~~~~~~~~~ 349 (396)
|++|+ ||.|++|++.+++.+..+
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCceeeee
Confidence 99999 999999999999988877
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.7e-37 Score=305.62 Aligned_cols=294 Identities=19% Similarity=0.229 Sum_probs=244.1
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
....+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.++.....+ .+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~-~~h~~~v~~~~~s~~-~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEKLLDI-KAHEDEVLCCAFSSD-DSYIATCSADKKVKI 683 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTT-SSEEEEEETTSEEEE
T ss_pred ceEEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCEEEEe-ccCCCCEEEEEEecC-CCEEEEEeCCCeEEE
Confidence 345788999999999999999 68999999999999999998888777 689999999999999 999999999999999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCC--CCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEe
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP--EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC 169 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (396)
||+.+++.+..+..+... +.+++|+| ++..+++++.|+.|++||+.++.... ....|...|.+++|
T Consensus 684 wd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~ 751 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQ---------VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCRF 751 (1249)
T ss_dssp EETTTCCEEEEEECCSSC---------EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSSCEEEEEE
T ss_pred EECCCCceEEEEcCCCCc---------EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh---eecCCCCCEEEEEE
Confidence 999999988887655433 99999999 56689999999999999999876443 33456678999999
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-----------CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-----------PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
+| ++.++++++.||.|++||+++......+... .....+.+++|+|+|..+++++ ++.+.+||+.++
T Consensus 752 sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 752 SP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTS 829 (1249)
T ss_dssp CS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTC
T ss_pred ec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCC
Confidence 99 9999999999999999999865432222110 1234788999999999999987 789999999887
Q ss_pred cccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCccee
Q 016032 239 NLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVN 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 318 (396)
...... ..........+.|+|+ +++++ +++.++.|++||+.++..+..+.+|. ..+.++
T Consensus 830 ~~~~~~-------~~~~~~~v~~~~~sp~---------~~~l~---~~~~dg~v~vwd~~~~~~~~~~~~h~-~~v~~v- 888 (1249)
T 3sfz_A 830 GLLAEI-------HTGHHSTIQYCDFSPY---------DHLAV---IALSQYCVELWNIDSRLKVADCRGHL-SWVHGV- 888 (1249)
T ss_dssp CEEEEE-------ECSSSSCCCEEEECSS---------TTEEE---EECSSSCEEEEETTTTEEEEEECCCS-SCEEEE-
T ss_pred CceeEE-------cCCCCCceEEEEEcCC---------CCEEE---EEeCCCeEEEEEcCCCceeeecCCCc-cceEEE-
Confidence 653211 1111223347889998 66777 78899999999999999988888776 778888
Q ss_pred eeccCCcEEEeec-CCcEEEEcCCCc
Q 016032 319 KLHPRDDVLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 319 ~~~~~~~~l~sg~-d~~i~iw~~~~~ 343 (396)
+|+|++++|++++ |+.|++|++.+.
T Consensus 889 ~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 889 MFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred EECCCCCEEEEEeCCCeEEEEEcccc
Confidence 8999999999999 999999997653
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-36 Score=269.07 Aligned_cols=285 Identities=18% Similarity=0.275 Sum_probs=218.3
Q ss_pred eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
...+|...|+|++| ++ .+|++|+.||.|++||+.+++....+ .+|...|.+++| + +.+|++|+.||.|++||+
T Consensus 128 ~~~~~~~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~--~-~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGSVLCLQY--D-ERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp CCCSSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSCCEEEEE-CCCSSCEEEEEC--C-SSEEEEEETTSCEEEEES
T ss_pred cccCCCCcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCCeEEEEE-cCCCCcEEEEEE--C-CCEEEEEcCCCeEEEEEC
Confidence 33467778999988 55 58999999999999999998877777 689999999999 4 789999999999999999
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
.+++.+..+..+.. .|.+++|++ ..+++++.||.|++||+.++...........+...|.++++ ++
T Consensus 201 ~~~~~~~~~~~h~~---------~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~ 266 (435)
T 1p22_A 201 NTGEMLNTLIHHCE---------AVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DD 266 (435)
T ss_dssp SSCCEEEEECCCCS---------CEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ET
T ss_pred CCCcEEEEEcCCCC---------cEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CC
Confidence 99988877754433 289999974 59999999999999999987665433345566778999999 46
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeeccccc
Q 016032 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFN 254 (396)
Q Consensus 175 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 254 (396)
+++++|+.|+.|++||+++.+....+. +|...|.+++| ++.+|++|+.||.|++||+++++.... +.
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~---------~~ 333 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRV---------LE 333 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEE---------EC
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEc--CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEE---------Ee
Confidence 899999999999999998755433332 68899999999 468999999999999999998765321 11
Q ss_pred ccCCc-eeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc---------hhhhhcCCCCCCCcceeeeccCC
Q 016032 255 RHLTP-FRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ---------LVAEVMDPNITTISPVNKLHPRD 324 (396)
Q Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~ 324 (396)
.+... ..+.| .+.+++ +|+.||.|++||+.++. ++..+.+|. ..+.++ +| ++
T Consensus 334 ~h~~~v~~~~~-----------~~~~l~---sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l-~~--~~ 395 (435)
T 1p22_A 334 GHEELVRCIRF-----------DNKRIV---SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS-GRVFRL-QF--DE 395 (435)
T ss_dssp CCSSCEEEEEC-----------CSSEEE---EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS-SCCCCE-EE--CS
T ss_pred CCcCcEEEEEe-----------cCCEEE---EEeCCCcEEEEECCCCCCccccccchheeeccCCC-CCeEEE-Ee--CC
Confidence 22221 23444 266666 78999999999998776 566666665 678877 66 78
Q ss_pred cEEEeec-CCcEEEEcCCCcceeeeccc
Q 016032 325 DVLASGS-SRSIFIWRPKEKSELVEQKE 351 (396)
Q Consensus 325 ~~l~sg~-d~~i~iw~~~~~~~~~~~~~ 351 (396)
.+|++|+ ||.|++||+.+.........
T Consensus 396 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 423 (435)
T 1p22_A 396 FQIVSSSHDDTILIWDFLNDPAAQAEPP 423 (435)
T ss_dssp SCEEECCSSSEEEEEC------------
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccCCC
Confidence 8999999 99999999988776554433
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-36 Score=283.72 Aligned_cols=318 Identities=14% Similarity=0.132 Sum_probs=249.4
Q ss_pred CCCCCccceeeeccccC---CeEEEEecCC-CCcEEEEEeCCCcEEEeecccceeeeEecC---CcccceeEEEEecCCC
Q 016032 5 HVIPDQVNCAVIRYHSR---RVTCLEFHPT-NNHILLSGDKKGQVGVWDFYKVSEKIVYGN---IHSCIVNNIRFNPTND 77 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~ 77 (396)
|++.....+..+.+|.. .|++++|+|+ + ++|++++.||.|++||+.+++....+.. .|...|.+++|+ + +
T Consensus 188 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~ 264 (615)
T 1pgu_A 188 YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D-S 264 (615)
T ss_dssp EETTTBEEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S-S
T ss_pred EeCCCcceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C-C
Confidence 66777888889999999 9999999999 7 6899999999999999998887777634 799999999999 7 9
Q ss_pred cEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceee
Q 016032 78 GTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILI 157 (396)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~ 157 (396)
.+|++++.|+.|++||+.+++.+..+..+... ....+.++.|. ++.++++++.+|.|++||+.++...... ..
T Consensus 265 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~-~~ 337 (615)
T 1pgu_A 265 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQ-----LGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI-SG 337 (615)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCTTC-----GGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE-CC
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc-----ccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE-eC
Confidence 99999999999999999999888877655321 11237777775 8999999999999999999875432211 11
Q ss_pred -------------------------------ecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCC-----------
Q 016032 158 -------------------------------HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE----------- 195 (396)
Q Consensus 158 -------------------------------~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~----------- 195 (396)
..+...|.+++| + .+..|++++.|+.|++||+.+.+
T Consensus 338 ~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~-~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s 415 (615)
T 1pgu_A 338 HNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-S-KAQEYSSISWDDTLKVNGITKHEFGSQPKVASAN 415 (615)
T ss_dssp CSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-C-STTCCEEEETTTEEEETTEEEEECSSCEEEEEEC
T ss_pred CCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-C-CCcEEEEEeCCCCEEEEEcccCcccCCceEEEEc
Confidence 123445666666 3 46677888888888888875422
Q ss_pred --------------------CCCccccCCCCCceeEEEEcCCCCEEEEEeC-CCcEEEEEcccccccCCCcceeeccccc
Q 016032 196 --------------------AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ-DNRLRIWDSIFGNLDSPSREIVHSHDFN 254 (396)
Q Consensus 196 --------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 254 (396)
....+..+.+...+.+++|+ +.+|++++. |+.|++||+.+++... ..+.
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~--------~~~~ 485 (615)
T 1pgu_A 416 NDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSF--------DLKT 485 (615)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEE--------ECSS
T ss_pred CCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccc--------cccC
Confidence 12223333467788999998 889999999 9999999998765421 1122
Q ss_pred cc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeecc----------C
Q 016032 255 RH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHP----------R 323 (396)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~----------~ 323 (396)
.+ .....+.|+|+ |++++ +|+.|+.|++||+.+++.+..+.+.+...+.++ +|+| +
T Consensus 486 ~~~~~v~~~~~s~~---------g~~l~---~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~~~~~~~~ 552 (615)
T 1pgu_A 486 PLRAKPSYISISPS---------ETYIA---AGDVMGKILLYDLQSREVKTSRWAFRTSKINAI-SWKPAEKGANEEEIE 552 (615)
T ss_dssp CCSSCEEEEEECTT---------SSEEE---EEETTSCEEEEETTTTEEEECCSCCCSSCEEEE-EECCCC------CCS
T ss_pred CccCceEEEEECCC---------CCEEE---EcCCCCeEEEeeCCCCcceeEeecCCCCceeEE-EEcCccccccccccC
Confidence 22 22357899998 78888 789999999999999999988887345888888 8999 9
Q ss_pred CcEEEeec-CCcEEEEcCCCc-ceeeeccccceEEE
Q 016032 324 DDVLASGS-SRSIFIWRPKEK-SELVEQKEEMKIIV 357 (396)
Q Consensus 324 ~~~l~sg~-d~~i~iw~~~~~-~~~~~~~~~~~~~~ 357 (396)
+++|++|+ |+.|++|++.++ +.+..+.+|...+.
T Consensus 553 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~ 588 (615)
T 1pgu_A 553 EDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 588 (615)
T ss_dssp CCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEE
T ss_pred CCEEEEEcCCCcEEEEECCCCceechhhhcCccceE
Confidence 99999999 999999999998 77888887765443
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7e-36 Score=268.57 Aligned_cols=295 Identities=16% Similarity=0.174 Sum_probs=223.3
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEec--CCCcEEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP--TNDGTVYA 82 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s 82 (396)
|++.++..+..+.+|.+.|++++|+|++ +|++|+.||+|++||+.++.....+ .+|...|.+++|++ + +.++++
T Consensus 147 wd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~-~~~l~s 222 (464)
T 3v7d_B 147 YDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVF-EGHNSTVRCLDIVEYKN-IKYIVT 222 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEEESSS-CEEEEE
T ss_pred EECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEE-CCCCCccEEEEEecCCC-CCEEEE
Confidence 7788888899999999999999999987 7999999999999999998877777 68999999999995 4 789999
Q ss_pred EeCCCeEEEEECCCCcccceeecCCC----------------CCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC
Q 016032 83 ASSDGTVSCTDLETGLALSLMNVNPN----------------GWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR 146 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~ 146 (396)
++.|+.|++||+.++........... ...++. ..+.+ ++++++++++++.||.|++||++
T Consensus 223 ~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~--~~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 223 GSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM--ASVRT--VSGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp EETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS--SCEEE--EEEETTEEEEEETTSCEEEEETT
T ss_pred EcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc--ceEEE--EcCCCCEEEEEeCCCeEEEEECC
Confidence 99999999999998765432111100 001111 12444 46789999999999999999998
Q ss_pred CCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeC
Q 016032 147 TNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
+++... ....+...|.+++|+| ++.++++|+.|+.|++||+++++....+ .+|...|.+++|+ +.+|++++.
T Consensus 299 ~~~~~~---~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~~~~~~--~~~l~s~s~ 370 (464)
T 3v7d_B 299 QMKCLY---ILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTL--QGHTALVGLLRLS--DKFLVSAAA 370 (464)
T ss_dssp TTEEEE---EECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEC--SSEEEEEET
T ss_pred CCcEEE---EecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEE--eCCCCcEEEEEEc--CCEEEEEeC
Confidence 865443 3345666899999999 9999999999999999999875543332 2689999999997 579999999
Q ss_pred CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 227 DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 227 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
||.|++||+.++..... .........+.|+|+ +++++ +|+ |+.|++||+.+++.+..+
T Consensus 371 dg~v~vwd~~~~~~~~~---------~~~~~~~~~~~~~~~---------~~~l~---~~~-dg~i~iwd~~~g~~~~~~ 428 (464)
T 3v7d_B 371 DGSIRGWDANDYSRKFS---------YHHTNLSAITTFYVS---------DNILV---SGS-ENQFNIYNLRSGKLVHAN 428 (464)
T ss_dssp TSEEEEEETTTCCEEEE---------EECTTCCCEEEEEEC---------SSEEE---EEE-TTEEEEEETTTCCEEESC
T ss_pred CCcEEEEECCCCceeee---------ecCCCCccEEEEEeC---------CCEEE---Eec-CCeEEEEECCCCcEEehh
Confidence 99999999987653210 001111124566665 66776 555 899999999999998875
Q ss_pred cCCCCCCCcceeeeccCCcEEEeec-CCcEEEEc
Q 016032 307 MDPNITTISPVNKLHPRDDVLASGS-SRSIFIWR 339 (396)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~ 339 (396)
...+...+..+ +|+ ...++++++ ||.+.+|-
T Consensus 429 ~~~~~~~v~~v-~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 429 ILKDADQIWSV-NFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TTTTCSEEEEE-EEE-TTEEEEEEEETTEEEEEE
T ss_pred hccCCCcEEEE-Eec-CCEEEEEEEeCCeEEEEE
Confidence 44455778877 786 344455555 77666553
No 74
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-36 Score=255.02 Aligned_cols=257 Identities=13% Similarity=0.180 Sum_probs=183.7
Q ss_pred ceeee-cc-ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc-------eeeeEecCCcccceeEEEEecCCCcEEEE
Q 016032 12 NCAVI-RY-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV-------SEKIVYGNIHSCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 12 ~~~~~-~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 82 (396)
....+ .+ |.+.|.+++|+|++ .+|++|+.|++|+|||+... .....+ .+|...|.+++|+|+ +.+|++
T Consensus 48 ~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~-g~~las 124 (330)
T 2hes_X 48 LIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSND-GYYLAT 124 (330)
T ss_dssp EEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTT-SCEEEE
T ss_pred EEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCC-CCEEEE
Confidence 34455 44 99999999999998 68999999999999998532 223333 789999999999999 999999
Q ss_pred EeCCCeEEEEECCCC----cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeee
Q 016032 83 ASSDGTVSCTDLETG----LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIH 158 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~ 158 (396)
++.|++|++||+... +.+..+..+. ..|.+++|+|++.+|++++.|+.|++||+..+... ......
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~-~~~~~~ 194 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHS---------QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE-CVAVLN 194 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCS---------SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE-EEEEEC
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCC---------CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee-EEEEcc
Confidence 999999999999533 2233333222 23999999999999999999999999998764211 122344
Q ss_pred cCCccEEEEEeccCC--CCEEEEeeCCCcEEEEecCCCCCC-----CccccC--CCCCceeEEEEcCCCCEEEEEeCCCc
Q 016032 159 RKGSKVVGLHCNPIQ--PELLLSCGNDHFARIWDIRRLEAG-----SSLCDL--PHKRVVNSAYFSPSGSKILTTSQDNR 229 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~-----~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~ 229 (396)
.|...|.+++|+| + +.+|++++.|++|++||++..... .....+ .|...|.+++|++++ +|++++.||.
T Consensus 195 ~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~ 272 (330)
T 2hes_X 195 GHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV 272 (330)
T ss_dssp CCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC
T ss_pred CCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE
Confidence 5667899999999 6 668999999999999998753211 112222 388899999999765 8999999999
Q ss_pred EEEEEcccccccCCCcceeecccccccC--CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc
Q 016032 230 LRIWDSIFGNLDSPSREIVHSHDFNRHL--TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299 (396)
Q Consensus 230 i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~ 299 (396)
|++||..+++... . ......+. ....+.|+|... +++++ +|+.|+.|++|++.+
T Consensus 273 v~iw~~~~~~~~~-----~-~~~~~~h~~~~v~~v~~~~~~~-------~~~la---s~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 273 LAVYEEVDGEWKV-----F-AKRALCHGVYEINVVKWLELNG-------KTILA---TGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEETTEEEE-----E-EEESCTTTTSCEEEEEEC------------CCEE---EEETTSEEEEEEC--
T ss_pred EEEEEcCCCceEE-----E-eccccccccceEEEEEEecCCC-------ceEEE---EecCCCcEEEEEecc
Confidence 9999987653200 0 00111121 234678888311 66777 789999999999864
No 75
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.3e-35 Score=265.14 Aligned_cols=290 Identities=15% Similarity=0.212 Sum_probs=232.4
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
|++.++..+..+.+|.+.|++++|++ .+|++|+.||.|++||+.+++....+ .+|...|.++.|+ +..+++++
T Consensus 144 wd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~---~~~l~s~s 216 (445)
T 2ovr_B 144 WSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLH---EKRVVSGS 216 (445)
T ss_dssp EETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEE---TTEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcEEEEE-CCCCCcEEEEEec---CCEEEEEe
Confidence 77788888899999999999999983 47999999999999999998887777 6899999999996 45899999
Q ss_pred CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
.||.|++||+.+++.+..+..+... +.++++ ++.++++++.+|.|++||++++.... ....+...+
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~~~~~---------v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~v 282 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMGHVAA---------VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH---TLQGHTNRV 282 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEECCSSC---------EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE---EECCCSSCE
T ss_pred CCCEEEEEECCCCcEEEEEcCCccc---------EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE---EecCCCCce
Confidence 9999999999999888777654332 888888 78899999999999999998865443 234556689
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
.+++| ++.++++++.|+.|++||+++.+....+ ..|...+.++.+ ++.+|++++.||.|++||+++++.....
T Consensus 283 ~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 283 YSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTL--TGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEE--CCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEE--cCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 99999 5689999999999999999875543332 267888888887 4679999999999999999887653211
Q ss_pred cceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc----CCCCCCCcceee
Q 016032 245 REIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM----DPNITTISPVNK 319 (396)
Q Consensus 245 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~----~~~~~~i~~~~~ 319 (396)
. ....+. ....+.|+ +.+++ +|+.||.|++||+.+++.+..+. ..+...+.++ +
T Consensus 356 ~------~~~~~~~~v~~~~~~-----------~~~l~---s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~ 414 (445)
T 2ovr_B 356 Q------GPNKHQSAVTCLQFN-----------KNFVI---TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI-R 414 (445)
T ss_dssp C------STTSCSSCEEEEEEC-----------SSEEE---EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE-E
T ss_pred c------cCCCCCCCEEEEEEC-----------CCEEE---EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE-E
Confidence 1 101111 12345553 45666 78999999999999999887772 2344677777 8
Q ss_pred eccCCcEEEeec-CCc----EEEEcCCCc
Q 016032 320 LHPRDDVLASGS-SRS----IFIWRPKEK 343 (396)
Q Consensus 320 ~~~~~~~l~sg~-d~~----i~iw~~~~~ 343 (396)
|+|++.+|++|+ ||+ |.|||+...
T Consensus 415 ~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 415 ASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp ECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 999999999999 897 999998653
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.5e-36 Score=280.09 Aligned_cols=302 Identities=15% Similarity=0.125 Sum_probs=236.2
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc----eeeeEecCCcccc-eeEEEEec--CCCcEEEEEeCCCeE
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV----SEKIVYGNIHSCI-VNNIRFNP--TNDGTVYAASSDGTV 89 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~-v~~~~~~~--~~~~~l~s~~~dg~v 89 (396)
..|.+.|.+++|+|++ ++|++++ ++.|+|||+.++ .....+ .+|... |.+++|+| + +.+|++++.||.|
T Consensus 15 ~~~~~~v~~~~~spdg-~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~-~~h~~~~v~~~~~sp~~~-~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTT-NAIAYPC-GKSAFVRCLDDGDSKVPPVVQF-TGHGSSVVTTVKFSPIKG-SQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEETTT-TEEEEEE-TTEEEEEECCSSCCSSCSEEEE-CTTTTSCEEEEEECSSTT-CCEEEEEETTSEE
T ss_pred CCccCceeEEEECCCC-CEEEEec-CCeEEEEECCCCCCccccceEE-ecCCCceEEEEEECcCCC-CCEEEEecCCCEE
Confidence 3689999999999999 5788887 789999999987 666666 789999 99999999 8 9999999999999
Q ss_pred EEEECCCC--------cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC----CeEEEEeCCCCCCCccceee
Q 016032 90 SCTDLETG--------LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF----GFLYLVDARTNSRSGEAILI 157 (396)
Q Consensus 90 ~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~i~d~~~~~~~~~~~~~ 157 (396)
++||+.++ .....+..+. ..+.+++|+|++++|++++.+ +.|++||... .....
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~-----~~~~~ 156 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLA---------GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN-----SLGEV 156 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCS---------SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-----EEEEC
T ss_pred EEEeCCCCcccccccccccchhhccc---------ccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC-----cceee
Confidence 99999755 3444443322 239999999999999999987 7899998332 22234
Q ss_pred ecCCccEEEEEeccCCCC-EEEEeeCCCcEEEEecCCCCCCCccccCCCCC---ceeEEEEcCC-CCEEEEEeCCCcEEE
Q 016032 158 HRKGSKVVGLHCNPIQPE-LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKR---VVNSAYFSPS-GSKILTTSQDNRLRI 232 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~d~~i~i 232 (396)
..+...|.+++|+| ++. ++++++.|+.|++||+.+.+....+. .|.. .|.+++|+|+ +++|++++.|+.|++
T Consensus 157 ~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 157 SGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp CSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred ecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeec--ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 45667899999999 666 89999999999999987654433322 5777 8999999999 999999999999999
Q ss_pred EEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCC--
Q 016032 233 WDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPN-- 310 (396)
Q Consensus 233 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~-- 310 (396)
||+.+++....... ...........+.|+ + +++++ +++.|+.|++||+.+++.+..+..+.
T Consensus 234 wd~~~~~~~~~~~~----~~~~~~~~v~~~~~~-~---------~~~l~---~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 234 FDGKSGEFLKYIED----DQEPVQGGIFALSWL-D---------SQKFA---TVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp EETTTCCEEEECCB----TTBCCCSCEEEEEES-S---------SSEEE---EEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred EECCCCCEeEEecc----cccccCCceEEEEEc-C---------CCEEE---EEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 99988775432100 000111223467777 4 66676 78899999999999999888877652
Q ss_pred -CCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccceEEEe
Q 016032 311 -ITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMKIIVC 358 (396)
Q Consensus 311 -~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~~~~~ 358 (396)
...+..+ .| +++.++++|+ |+.|++|++.+++.+..+..|...+.+
T Consensus 297 ~~~~~~~~-~~-~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~ 344 (615)
T 1pgu_A 297 LGNQQVGV-VA-TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITA 344 (615)
T ss_dssp GGGCEEEE-EE-EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEE
T ss_pred ccCceeEE-Ee-CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEE
Confidence 2344444 45 4889999988 999999999999988888887765544
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.7e-36 Score=266.08 Aligned_cols=291 Identities=14% Similarity=0.150 Sum_probs=221.3
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceee---eEecCCcccceeEEEEec-CCCcEEEEEeCCCeEEEEECCC
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK---IVYGNIHSCIVNNIRFNP-TNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
.....++++|+...++++++.||.|+||++...... .....+|...|.+++|+| + +.+|++++.||.|++||+.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN-DNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTC-TTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCC-CCEEEEEeCCCeEEEEEccC
Confidence 345578999987555667889999999999664321 222367999999999999 6 89999999999999999998
Q ss_pred Cc-------ccceeecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeCCCCCCCccceee--ecCCccEEE
Q 016032 97 GL-------ALSLMNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDARTNSRSGEAILI--HRKGSKVVG 166 (396)
Q Consensus 97 ~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~~~~~~~~~~~~~--~~~~~~i~~ 166 (396)
+. .+..+..+.. .|.+++|+|++ .+|++++.||.|++||+++++... .. ..+...|.+
T Consensus 114 ~~~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTK---------RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL---TLGPDVHPDTIYS 181 (402)
T ss_dssp TCCSSCBCSCSEEEECCSS---------CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE---EECTTTCCSCEEE
T ss_pred CCCccccCCceEEecCCCC---------eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE---EEecCCCCCceEE
Confidence 73 3444443332 39999999998 799999999999999999865432 23 446668999
Q ss_pred EEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCc-eeEEEEcCCCCEEEEE---eCCCcEEEEEcccccccC
Q 016032 167 LHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRV-VNSAYFSPSGSKILTT---SQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~ 242 (396)
++|+| ++.+|++++.|+.|++||+++.+....+. ..|.+. +.+++|+|++.+|++| +.|+.|++||+++++...
T Consensus 182 ~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 182 VDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKD-RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp EEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEE-CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred EEECC-CCCEEEEEecCCcEEEEeCCCCceeeeec-cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc
Confidence 99999 99999999999999999998755433331 245554 8999999999999999 789999999998765411
Q ss_pred CCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch-hhhhcCC-CCCCCcceeee
Q 016032 243 PSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL-VAEVMDP-NITTISPVNKL 320 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~-~~~~~~~-~~~~i~~~~~~ 320 (396)
. ............+.|+|+ |++++. +|+.|+.|++||+.+++. +..+..+ +...+.++ +|
T Consensus 260 --~----~~~~~~~~~v~~~~~s~~---------~~~l~~--~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~-~~ 321 (402)
T 2aq5_A 260 --S----LQELDTSSGVLLPFFDPD---------TNIVYL--CGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGM-GY 321 (402)
T ss_dssp --E----EEECCCCSSCEEEEEETT---------TTEEEE--EETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEE-EE
T ss_pred --e----EEeccCCCceeEEEEcCC---------CCEEEE--EEcCCCeEEEEEecCCCcceEeecccccCCcccce-EE
Confidence 1 111222233457889998 555531 467899999999998874 4444332 34678888 89
Q ss_pred ccCCcEEEeecCCcEEEEcCCCcce
Q 016032 321 HPRDDVLASGSSRSIFIWRPKEKSE 345 (396)
Q Consensus 321 ~~~~~~l~sg~d~~i~iw~~~~~~~ 345 (396)
+|++.++++ +++.+++|++.+++.
T Consensus 322 sp~~~~~~s-~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 322 MPKRGLEVN-KCEIARFYKLHERKC 345 (402)
T ss_dssp CCGGGSCGG-GTEEEEEEEEETTEE
T ss_pred eccccccee-cceeEEEEEcCCCcE
Confidence 999998765 467999999988653
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=265.35 Aligned_cols=291 Identities=16% Similarity=0.203 Sum_probs=212.1
Q ss_pred EecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEec-CCCcEEEEEeCCCeEEEEECCC---Ccccc-
Q 016032 27 EFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP-TNDGTVYAASSDGTVSCTDLET---GLALS- 101 (396)
Q Consensus 27 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~---~~~~~- 101 (396)
.|+|++ ..+++++ .|+.. ++.+..+..+|...|++++|+| + +.+|++|+.||+|++||+.+ +....
T Consensus 34 ~f~~~~-~~~~~~~------~w~~~-g~~~~~~~~~h~~~V~~~~~s~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 104 (437)
T 3gre_A 34 EFGPIQ-EIVRSPN------MGNLR-GKLIATLMENEPNSITSSAVSPGE-TPYLITGSDQGVIKIWNLKEIIVGEVYSS 104 (437)
T ss_dssp GGCCCC-CCCCCCC------GGGCC-CCEEEEECTTTTSCEEEEEEECSS-SCEEEEEETTSEEEEEEHHHHHTTCCCSC
T ss_pred hcCCcc-ccccccc------ccccc-ceEEeeeccCCCCceEEEEECCCC-CCEEEEecCCceEEEeECcccccCcccce
Confidence 466776 4455544 48844 4556666578999999999999 7 89999999999999999876 43211
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC---CCCCCccc-------eeeec--CCccEEEEE-
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR---TNSRSGEA-------ILIHR--KGSKVVGLH- 168 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~---~~~~~~~~-------~~~~~--~~~~i~~~~- 168 (396)
..... +...|.+++|+|++.+|++++.||.|++||+. .+...... ..... +...+.++.
T Consensus 105 ~~~~~--------h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 176 (437)
T 3gre_A 105 SLTYD--------CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRA 176 (437)
T ss_dssp SEEEE--------CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEE
T ss_pred eeecc--------CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEE
Confidence 11111 11339999999999999999999999999995 33221100 01111 344566666
Q ss_pred -eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcce
Q 016032 169 -CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREI 247 (396)
Q Consensus 169 -~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 247 (396)
+++ ++.+|++++.|+.|++||+++.+....+....|...|++++|+|++.+|++|+.||.|++||+++++....
T Consensus 177 ~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~---- 251 (437)
T 3gre_A 177 FVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRS---- 251 (437)
T ss_dssp EECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE----
T ss_pred EEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEE----
Confidence 456 78999999999999999998765544443323788999999999999999999999999999998765321
Q ss_pred eecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC------------------
Q 016032 248 VHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP------------------ 309 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~------------------ 309 (396)
..+........+.|+|.-. ..+.+++ +|+.|+.|++||+.+++++..+.++
T Consensus 252 ---~~~~~~~~v~~~~~~~~~s-----~~~~~l~---s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 252 ---WSFGDHAPITHVEVCQFYG-----KNSVIVV---GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp ---EBCTTCEEEEEEEECTTTC-----TTEEEEE---EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred ---EecCCCCceEEEEeccccC-----CCccEEE---EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 1111222234565555311 1177777 8999999999999999877766644
Q ss_pred -------CCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeecccc
Q 016032 310 -------NITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 310 -------~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
+...+.++ +|+ ++++|++|+ |+.|++||+.+++.+..+..+
T Consensus 321 ~~~~~~~~~~~v~~l-~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 321 LNFCGIRSLNALSTI-SVS-NDKILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp CCCCCCCSGGGGCCE-EEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred ceecccccCCceEEE-EEC-CceEEEecCCCCeEEEEECCCcccceEEecc
Confidence 23446666 788 778999999 999999999999988888764
No 79
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-34 Score=249.92 Aligned_cols=295 Identities=13% Similarity=0.085 Sum_probs=201.0
Q ss_pred CCCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEE-E
Q 016032 3 PAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTV-Y 81 (396)
Q Consensus 3 p~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~ 81 (396)
|-|.+.....+..+.+|.+.|++++|+|+| ++|++|+.++ ++||++.+....... +...+..+++.++ .+.+ +
T Consensus 2 ~i~s~~~~~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~ 75 (355)
T 3vu4_A 2 PLGSMITRNPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHIMSQ---EMRHLSKVRMLHR-TNYVAF 75 (355)
T ss_dssp -----------------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEEEEE---ECSCCCEEEECTT-SSEEEE
T ss_pred CcccccccCCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcceeeee---ecCCeEEEEEcCC-CCEEEE
Confidence 556677777777889999999999999999 6899988775 789999877655543 2235888889888 5555 6
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCC-CCCccceeeecC
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTN-SRSGEAILIHRK 160 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~-~~~~~~~~~~~~ 160 (396)
+++.|++|++||+.+++.+..+..+. .+.+++++++. ++++ .++.|++||+.+. +.......
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~~~~~~~----------~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---- 138 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVSRIKVDA----------PVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---- 138 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEEEEECSS----------CEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----
T ss_pred EECCccEEEEEECCCCcEEEEEECCC----------ceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----
Confidence 67888999999999999888776432 28999998764 3333 4789999999987 44433211
Q ss_pred CccEEEEEeccCCCCEEEE--eeCCCcEEEEecCCCCCC-------------C-ccccCCCCCceeEEEEcCCCCEEEEE
Q 016032 161 GSKVVGLHCNPIQPELLLS--CGNDHFARIWDIRRLEAG-------------S-SLCDLPHKRVVNSAYFSPSGSKILTT 224 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l~~--~~~d~~i~~wd~~~~~~~-------------~-~~~~~~~~~~i~~~~~~~~~~~l~~~ 224 (396)
+...+++++ .++++ |+.+|.|++||+++.... . .....+|...|.+++|+|++++|++|
T Consensus 139 --~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 139 --FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp --EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred --CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 334455665 55555 688999999999864310 0 12223799999999999999999999
Q ss_pred eCCCc-EEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchh
Q 016032 225 SQDNR-LRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLV 303 (396)
Q Consensus 225 ~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~ 303 (396)
+.|++ |++||+++++.+..... . ........++|+|+ |++++ +++.|+.|++||+.++...
T Consensus 214 s~d~~~v~iwd~~~~~~~~~~~~-----g-~h~~~v~~~~~s~~---------~~~l~---s~s~d~~v~iw~~~~~~~~ 275 (355)
T 3vu4_A 214 SQDGTIIRVFKTEDGVLVREFRR-----G-LDRADVVDMKWSTD---------GSKLA---VVSDKWTLHVFEIFNDQDN 275 (355)
T ss_dssp ETTCSEEEEEETTTCCEEEEEEC-----T-TCCSCEEEEEECTT---------SCEEE---EEETTCEEEEEESSCCSCC
T ss_pred eCCCCEEEEEECCCCcEEEEEEc-----C-CCCCcEEEEEECCC---------CCEEE---EEECCCEEEEEEccCCCCc
Confidence 99998 99999998876432110 0 01223357899998 78888 8899999999999765321
Q ss_pred h--hhc--------------------CCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 304 A--EVM--------------------DPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 304 ~--~~~--------------------~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
. .+. .........+ +|++++++|++++ ||.+++|++..++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 276 KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKI-AWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEE-EESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ccccccceeeccccccccceeEEEeccCCCCCceEE-EEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 1 110 0111112334 8999999999999 9999999987654
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1e-34 Score=278.90 Aligned_cols=304 Identities=14% Similarity=0.177 Sum_probs=231.6
Q ss_pred CCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 4 AHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.|++.++..+..+.+|.++|.+++|+|++ ++|++|+.||.|+|||+.++.....+ .+|...|.+++|+|+ +.+|+++
T Consensus 39 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~-~~~~~~v~~~~~s~~-~~~l~~~ 115 (814)
T 3mkq_A 39 IWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDF-EAHPDYIRSIAVHPT-KPYVLSG 115 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSS-SSEEEEE
T ss_pred EEECCCCceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEE-ecCCCCEEEEEEeCC-CCEEEEE
Confidence 37778888889999999999999999999 68999999999999999998877777 679999999999999 8999999
Q ss_pred eCCCeEEEEECCCC-cccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC
Q 016032 84 SSDGTVSCTDLETG-LALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG 161 (396)
Q Consensus 84 ~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~ 161 (396)
+.||.|++||+.++ .....+..+.. .+.+++|+| ++..+++++.+|.|++||+..+....... ..+.
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~~~---------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~ 184 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGHEH---------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT--TGQE 184 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECCSS---------CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEE--CCCT
T ss_pred cCCCEEEEEECCCCceEEEEEcCCCC---------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEe--cCCC
Confidence 99999999999887 44444443332 299999999 88999999999999999998866544322 2223
Q ss_pred ccEEEEEeccC-CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 162 SKVVGLHCNPI-QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 162 ~~i~~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
..+.+++|+|. ++.+|++++.||.|++||+++.+....+ ..|...|.+++|+|++.+|++++.||.|++||+.+++.
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL--EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 57889999873 6779999999999999999865543222 25888999999999999999999999999999988765
Q ss_pred cCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc-------------
Q 016032 241 DSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM------------- 307 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~------------- 307 (396)
..... ........++|+|+.... +++ .+.++.+.+|++..+.....+.
T Consensus 263 ~~~~~--------~~~~~v~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (814)
T 3mkq_A 263 EKTLN--------VGLERSWCIATHPTGRKN-------YIA----SGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNA 323 (814)
T ss_dssp EEEEC--------CSSSSEEEEEECTTCGGG-------EEE----EEETTEEEEEECSCCSCCEEECSSSEEEEECCTTS
T ss_pred EEEee--------cCCCcEEEEEEccCCCce-------EEE----EEeCCCEEEEEcCCCCceeEECCCCCEEEECcccc
Confidence 32111 011233578888873211 222 2334456666654322111100
Q ss_pred -----------------------------CCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCCc
Q 016032 308 -----------------------------DPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEK 343 (396)
Q Consensus 308 -----------------------------~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~ 343 (396)
.+....+.++ +|+|+|++|++++|+.+.+|++...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~la~~~~~~~~i~~~~~~ 387 (814)
T 3mkq_A 324 AASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSL-AHSPNGRFVTVVGDGEYVIYTALAW 387 (814)
T ss_dssp CTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEE-EECTTSSEEEEEETTEEEEEETTTT
T ss_pred cceeeeeeecccccccccCccceeeeecCCCCccCCcee-EECCCCCEEEEecCCEEEEEECccc
Confidence 1122345666 8999999999988999999997654
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-35 Score=276.10 Aligned_cols=263 Identities=15% Similarity=0.184 Sum_probs=203.2
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc--ceeeeEecCCcccceeEEEEecCC-CcEEEEEeCCCeE
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK--VSEKIVYGNIHSCIVNNIRFNPTN-DGTVYAASSDGTV 89 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~v 89 (396)
...+.+|.+.|++++|+|++ .+|++|+.||.|+|||+.+ ......+ .+|..+|.+++|+|+. +.+|++|+.||.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCCccceec-cCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 45789999999999999999 5899999999999999984 3444444 7899999999998763 6899999999999
Q ss_pred EEEECCCCc--ccceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 90 SCTDLETGL--ALSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 90 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
++||+.+++ ....+..+. ..|.+++|+|+ +..+++|+.||.|++||++....... .....+...|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~---------~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-~~~~~~~~~v~ 149 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHS---------ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVN 149 (753)
T ss_dssp EEEEEETTEEEEEEEECCCS---------SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-EEEECCSSCEE
T ss_pred EEEECCCCcccccccccCCC---------CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-eEeecCCCceE
Confidence 999999886 333332222 23999999999 99999999999999999998754332 24456667899
Q ss_pred EEEeccC------------CCCEEEEeeCCCcEEEEecCCCCCC-Ccccc-CCCCCceeEEEEcCC---CCEEEEEeCCC
Q 016032 166 GLHCNPI------------QPELLLSCGNDHFARIWDIRRLEAG-SSLCD-LPHKRVVNSAYFSPS---GSKILTTSQDN 228 (396)
Q Consensus 166 ~~~~~~~------------~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~-~~~~~~i~~~~~~~~---~~~l~~~~~d~ 228 (396)
+++|+|. ++.++++|+.||.|++||+++.... ..... .+|...|.+++|+|+ +.+|++++.||
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 9999994 4889999999999999999865432 12222 268999999999999 89999999999
Q ss_pred cEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcC
Q 016032 229 RLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD 308 (396)
Q Consensus 229 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~ 308 (396)
.|++||+.++.... .........
T Consensus 230 ~I~iwd~~~~~~~~---------------------------------------------------------~~~~~~~~~ 252 (753)
T 3jro_A 230 TCIIWTQDNEQGPW---------------------------------------------------------KKTLLKEEK 252 (753)
T ss_dssp CEEEEEESSSSSCC---------------------------------------------------------BCCBSSSSC
T ss_pred EEEEecCCCCCCcc---------------------------------------------------------eeEEeccCC
Confidence 99999997653200 000011112
Q ss_pred CCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCccee
Q 016032 309 PNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSEL 346 (396)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~ 346 (396)
+...+.++ +|+|+|++|++|+ ||.|++|++.++...
T Consensus 253 -~~~~v~~l-~~spdg~~l~s~s~Dg~I~vwd~~~~~~~ 289 (753)
T 3jro_A 253 -FPDVLWRA-SWSLSGNVLALSGGDNKVTLWKENLEGKW 289 (753)
T ss_dssp -CSSCCCCE-EECTTTCCEEEECSSSCEECCBCCSSSCC
T ss_pred -CCCceEEE-EEcCCCCEEEEEcCCCEEEEEecCCCCCc
Confidence 23567777 8999999999999 999999999865533
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-34 Score=254.70 Aligned_cols=266 Identities=18% Similarity=0.247 Sum_probs=204.9
Q ss_pred CCCCCccceeeecc-ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 5 HVIPDQVNCAVIRY-HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 5 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
|++.++.....+.. |...|++++|+|++ .+|++|+.||.|++||+.++.....+ .+|...|.+++|+ +..|+++
T Consensus 118 w~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~---~~~l~~~ 192 (401)
T 4aez_A 118 WNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKLRTM-AGHQARVGCLSWN---RHVLSSG 192 (401)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEEE---TTEEEEE
T ss_pred eeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEEEEe-cCCCCceEEEEEC---CCEEEEE
Confidence 66667766666665 89999999999998 68999999999999999988877777 6899999999995 5699999
Q ss_pred eCCCeEEEEECCC-CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc
Q 016032 84 SSDGTVSCTDLET-GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS 162 (396)
Q Consensus 84 ~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 162 (396)
+.||.|++||++. ......+..+.. .|.+++|+|++.+|++++.|+.|++||+++..... ....+..
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~---~~~~~~~ 260 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSS---------EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF---TKTNHNA 260 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSS---------CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE---EECCCSS
T ss_pred cCCCCEEEEecccCcceeeEEcCCCC---------CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE---EecCCcc
Confidence 9999999999984 444555543332 39999999999999999999999999999865432 3345666
Q ss_pred cEEEEEeccCCCCEEEEee--CCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEE--eCCCcEEEEEcccc
Q 016032 163 KVVGLHCNPIQPELLLSCG--NDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT--SQDNRLRIWDSIFG 238 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~ 238 (396)
.|.+++|+|....++++++ .|+.|++||+++.+. +..+.+...|.+++|+|++.+|+++ +.||.|++||+.++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR---VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE---EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 8999999995556777765 799999999986544 3334567889999999999999994 48999999999876
Q ss_pred cccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC
Q 016032 239 NLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
+.... ..+..+ .....+.|+|+ |++++ +++.|+.|++|++.+++.+......
T Consensus 338 ~~~~~-------~~~~~h~~~v~~~~~s~d---------g~~l~---s~~~dg~i~iw~~~~~~~~~~~~~~ 390 (401)
T 4aez_A 338 GLTKQ-------VDIPAHDTRVLYSALSPD---------GRILS---TAASDENLKFWRVYDGDHVKRPIPI 390 (401)
T ss_dssp EEEEE-------EEEECCSSCCCEEEECTT---------SSEEE---EECTTSEEEEEECCC----------
T ss_pred cceeE-------EEecCCCCCEEEEEECCC---------CCEEE---EEeCCCcEEEEECCCCccccccccc
Confidence 54221 111122 22347899998 77787 7899999999999999887765433
No 83
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-35 Score=265.60 Aligned_cols=307 Identities=9% Similarity=0.031 Sum_probs=201.1
Q ss_pred eeccccCCeEEEEecCCCC--------cEEEE-------------------EeCCCcEEEeecccceeee---EecCCcc
Q 016032 15 VIRYHSRRVTCLEFHPTNN--------HILLS-------------------GDKKGQVGVWDFYKVSEKI---VYGNIHS 64 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~--------~~l~s-------------------~~~dg~i~iwd~~~~~~~~---~~~~~~~ 64 (396)
.+. +.+.|.+|+|+|++. ++||+ ++.|++|+||++.+++... .....|.
T Consensus 129 ~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~ 207 (524)
T 2j04_B 129 IYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF 207 (524)
T ss_dssp EEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC
T ss_pred EEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC
Confidence 444 688999999999851 45665 4578899999998765421 1124578
Q ss_pred cceeEEEEecC-----CCcEEEEEeCCCeEEEEECCCCcccce--eec--CCCCCCCCCcceeeeEEEeCCCCCEEEEEe
Q 016032 65 CIVNNIRFNPT-----NDGTVYAASSDGTVSCTDLETGLALSL--MNV--NPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135 (396)
Q Consensus 65 ~~v~~~~~~~~-----~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 135 (396)
..|.+++|+|+ .+.+|++++.||+|++||+.++..... ... +...+.++. ..|.+++|+++ ..|++|+
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~--~~v~sv~~s~~-~~lasgs 284 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD--SLITTFDFLSP-TTVVCGF 284 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT--TCEEEEEESSS-SEEEEEE
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC--CCEEEEEecCC-CeEEEEe
Confidence 89999999996 147999999999999999987653210 000 000111222 34999999986 4899999
Q ss_pred cCCeEEEEeCCCCCCCccceeeecCCccEEEE--EeccCCC-CEEEEeeCCCcEEEEecCCCCCCCccccCCCC--Ccee
Q 016032 136 NFGFLYLVDARTNSRSGEAILIHRKGSKVVGL--HCNPIQP-ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK--RVVN 210 (396)
Q Consensus 136 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~--~~i~ 210 (396)
.||.|++||++++..... ....|...|.++ +|+| ++ .+|++++.|++|+|||+++.+....+. +|. ..|.
T Consensus 285 ~DgtV~lWD~~~~~~~~~--~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~--~~~~~~~v~ 359 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSF--YDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTV--SRFRGSNLV 359 (524)
T ss_dssp TTSEEEEEETTBCSSCSE--EEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEE--EECSCCSCC
T ss_pred CCCEEEEEECCCCCCceE--EeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccc--cccccCccc
Confidence 999999999997643322 244566689999 5677 76 899999999999999998654433322 233 3588
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccc
Q 016032 211 SAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAAL 289 (396)
Q Consensus 211 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d 289 (396)
+++|+|++..|++++.|++|++||++++.+... +.++. ....++|+|+ |++++ +|+.|
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~---------l~gH~~~V~sva~Sp~---------g~~l~---Sgs~D 418 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP---------LVSRETTITAIGVSRL---------HPMVL---AGSAD 418 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEE---------EEECSSCEEEEECCSS---------CCBCE---EEETT
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECccccccee---------eecCCCceEEEEeCCC---------CCeEE---EEECC
Confidence 999999999999999999999999998765321 11222 3357899998 77777 89999
Q ss_pred cceEEEEcCccchhhhhcCC----CCCCCcceeeeccCCcEEEeecCCcEEEEcCC-CcceeeeccccceE
Q 016032 290 HPIDFIDITTGQLVAEVMDP----NITTISPVNKLHPRDDVLASGSSRSIFIWRPK-EKSELVEQKEEMKI 355 (396)
Q Consensus 290 ~~i~vwd~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~-~~~~~~~~~~~~~~ 355 (396)
++|++||+..+ .+..+... ....+..+ +|+|++..+.. . ..+.+|... ++..+..+.+|...
T Consensus 419 gtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v-~~sp~g~~~~~-~-~~~~~~~~~~~g~~~~~l~gh~~~ 485 (524)
T 2j04_B 419 GSLIITNAARR-LLHGIKNSSATQKSLRLWKW-DYSIKDDKYRI-D-SSYEVYPLTVNDVSKAKIDAHGIN 485 (524)
T ss_dssp TEEECCBSCSS-TTTCC------CCCCEEEEC-BCCSSSCEEEE-C-CCCCCCC-------------CCCS
T ss_pred CEEEEEechHh-hccccccCccceeeeEEEEe-ccCCCCCeEEc-c-CCceecccccCCcceeeecCCCce
Confidence 99999998654 33322211 11124456 89999986533 2 233445443 45666666666543
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.9e-34 Score=270.28 Aligned_cols=259 Identities=17% Similarity=0.220 Sum_probs=201.4
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.....+.+|...|.+++|+|++ ++|++|+.||+|+|||+.++.....+ .+|...|.+++|+|+ +.+|++++.|++|+
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~~~~~~-~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGVSTRRF-VGHTKDVLSVAFSLD-NRQIVSASRDRTIK 497 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTT-SSCEEEEETTSCEE
T ss_pred cccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCcceeEE-eCCCCCEEEEEEeCC-CCEEEEEeCCCEEE
Confidence 3456789999999999999999 68999999999999999998877776 689999999999999 99999999999999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCC--CEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK--GVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
+||+....... +.... .++. ..|.+++|+|++ ..+++++.|+.|++||++...... ....|...|.+++
T Consensus 498 iwd~~~~~~~~-~~~~~---~~h~--~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~---~~~~h~~~v~~v~ 568 (694)
T 3dm0_A 498 LWNTLGECKYT-ISEGG---EGHR--DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS---TLAGHTGYVSTVA 568 (694)
T ss_dssp EECTTSCEEEE-ECSST---TSCS--SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEE
T ss_pred EEECCCCccee-eccCC---CCCC--CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE---EEcCCCCCEEEEE
Confidence 99986543322 21111 1122 349999999986 689999999999999998865432 3445667899999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
|+| ++.+|++|+.|+.|++||+++.+. +..+.+...|.+++|+|++.+|++++ ++.|++||++++..........
T Consensus 569 ~sp-dg~~l~sg~~Dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~ 643 (694)
T 3dm0_A 569 VSP-DGSLCASGGKDGVVLLWDLAEGKK---LYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDL 643 (694)
T ss_dssp ECT-TSSEEEEEETTSBCEEEETTTTEE---EECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCC
T ss_pred EeC-CCCEEEEEeCCCeEEEEECCCCce---EEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccc
Confidence 999 999999999999999999987543 44445667899999999998887776 5679999999887543221100
Q ss_pred ec-----------ccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC
Q 016032 249 HS-----------HDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 249 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
.. ...........+.|+|+ |++++ +|+.||.|+||++.
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~l~~spd---------g~~l~---sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 644 KAEAEKADNSGPAATKRKVIYCTSLNWSAD---------GSTLF---SGYTDGVIRVWGIG 692 (694)
T ss_dssp C----------------CCCCEEEEEECTT---------SSEEE---EEETTSEEEEEEC-
T ss_pred ccccccccccccccCCceeEEeeeEEEcCC---------CCEEE---EEcCCCeEEEEecc
Confidence 00 00001112346889998 88888 89999999999985
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.1e-35 Score=255.25 Aligned_cols=269 Identities=12% Similarity=0.080 Sum_probs=205.7
Q ss_pred CCCCCccceeeecc-----ccCCeEEEEecCCCC---cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEec-C
Q 016032 5 HVIPDQVNCAVIRY-----HSRRVTCLEFHPTNN---HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP-T 75 (396)
Q Consensus 5 ~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~ 75 (396)
|++.....+..+.. |...|++++|+|++. .+|++|+.||.|++||+.+++....+ .+|...|.+++|+| +
T Consensus 49 w~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~ 127 (366)
T 3k26_A 49 YECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY-VGHGNAINELKFHPRD 127 (366)
T ss_dssp EEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE-ESCCSCEEEEEECSSC
T ss_pred EEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee-cCCCCcEEEEEECCCC
Confidence 55555555666655 557899999999931 58999999999999999988877776 67999999999999 6
Q ss_pred CCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccce
Q 016032 76 NDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAI 155 (396)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~ 155 (396)
+.+|++++.||.|++||+.+++....+.... .+...|.+++|+|++.+|++++.||.|++||++++.......
T Consensus 128 -~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 128 -PNLLLSVSKDHALRLWNIQTDTLVAIFGGVE------GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp -TTEEEEEETTSCEEEEETTTTEEEEEECSTT------SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred -CCEEEEEeCCCeEEEEEeecCeEEEEecccc------cccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 8999999999999999999988777662100 111239999999999999999999999999998764332110
Q ss_pred -------------------------eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC-----------Cc
Q 016032 156 -------------------------LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG-----------SS 199 (396)
Q Consensus 156 -------------------------~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-----------~~ 199 (396)
....+...|.+++|+ +++|++++.|+.|++||+++.... ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 111256689999998 479999999999999999865431 11
Q ss_pred cccC-CCCCceeEEEEcCC--CCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeE
Q 016032 200 LCDL-PHKRVVNSAYFSPS--GSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVI 276 (396)
Q Consensus 200 ~~~~-~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (396)
+..+ .|...|.+++|+|+ +.+|++++.||.|++||+.+++...........+ ........+.|+|+
T Consensus 278 ~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~--------- 346 (366)
T 3k26_A 278 LGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH--KCGAAIRQTSFSRD--------- 346 (366)
T ss_dssp EEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCT--TCCSCEEEEEECTT---------
T ss_pred eccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccc--ccCCceEEEEeCCC---------
Confidence 2222 57788999999999 9999999999999999999876543111111111 11233457899998
Q ss_pred eeeeeeecccccccceEEEEcC
Q 016032 277 GRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 277 g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
|++++ +++.||.|++||+.
T Consensus 347 ~~~l~---s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 347 SSILI---AVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEE---EEETTSEEEEEEC-
T ss_pred CCeEE---EEeCCCEEEEEEec
Confidence 77888 78999999999985
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-34 Score=254.22 Aligned_cols=257 Identities=17% Similarity=0.261 Sum_probs=201.3
Q ss_pred ceeeeccccCCeEEEEecC-CCCcEEEEEeCCCcEEEeecccc-------eeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHP-TNNHILLSGDKKGQVGVWDFYKV-------SEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.+..+.+|.+.|++++|+| ++ .+|++|+.||.|+|||+.++ .....+ .+|...|.+++|+|++..+|+++
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITL-EGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE-ECCSSCEEEEEECSSBTTEEEEE
T ss_pred CCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEe-cCCCCeEEEEEECcCCCCEEEEE
Confidence 4567889999999999999 66 79999999999999999886 334444 67999999999999933799999
Q ss_pred eCCCeEEEEECCCCccccee--ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC
Q 016032 84 SSDGTVSCTDLETGLALSLM--NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG 161 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~ 161 (396)
+.|+.|++||+.+++.+..+ ..+.. .|.+++|+|++.+|++++.||.|++||++++....... ..+.
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~ 219 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGPDVHPD---------TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD--RPHE 219 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECTTTCCS---------CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--CSSC
T ss_pred cCCCEEEEEECCCCCccEEEecCCCCC---------ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec--cCCC
Confidence 99999999999999887776 33322 39999999999999999999999999999866543221 2333
Q ss_pred c-cEEEEEeccCCCCEEEEe---eCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE-EeCCCcEEEEEcc
Q 016032 162 S-KVVGLHCNPIQPELLLSC---GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT-TSQDNRLRIWDSI 236 (396)
Q Consensus 162 ~-~i~~~~~~~~~~~~l~~~---~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~iwd~~ 236 (396)
. .+.++.|+| ++.+|++| +.|+.|++||+++.+.........+...+.+++|+|++.+|++ ++.|+.|++||+.
T Consensus 220 ~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 220 GTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp SSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred CCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 2 488999999 89999999 7899999999987655333444467788999999999999965 5579999999998
Q ss_pred cccc-cCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 237 FGNL-DSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
+++. ... +. .+........+.|+|+ +.+++ +.++.+++|++.++.+
T Consensus 299 ~~~~~~~~----l~--~~~~~~~v~~~~~sp~---------~~~~~-----s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 299 SEAPFLHY----LS--MFSSKESQRGMGYMPK---------RGLEV-----NKCEIARFYKLHERKC 345 (402)
T ss_dssp SSTTCEEE----EE--EECCSSCCSEEEECCG---------GGSCG-----GGTEEEEEEEEETTEE
T ss_pred CCCcceEe----ec--ccccCCcccceEEecc---------cccce-----ecceeEEEEEcCCCcE
Confidence 8763 111 11 1112223357899997 55554 3566899999987653
No 87
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-34 Score=255.03 Aligned_cols=295 Identities=13% Similarity=0.090 Sum_probs=216.1
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce---eeeEec------------------------------------
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---EKIVYG------------------------------------ 60 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~------------------------------------ 60 (396)
..++.+++|+|+| ++|+++ .++.|++||+.+++ .+..+.
T Consensus 4 ~~p~~~v~~s~dg-~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDG-SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSS-SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCC-CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 3578999999999 566655 57899999998876 333321
Q ss_pred -----------------CCcccceeEEEEecCCCcEE-EEEeCCCeEEEEECC--CCcccceeecCCCCCCCCCcceeee
Q 016032 61 -----------------NIHSCIVNNIRFNPTNDGTV-YAASSDGTVSCTDLE--TGLALSLMNVNPNGWHGPRTWRMLY 120 (396)
Q Consensus 61 -----------------~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~v~ 120 (396)
.+|...|.+++|+|+ +.+| ++++.||.|++||+. +++.+..+..+.. ...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------~~~v~ 153 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSD-ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF-------SKRPN 153 (450)
T ss_dssp ------------------CCCCCEEEEEECTT-SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC-------SSCEE
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCC-CCEEEEEECCCCeEEEEECcCCCCceeeeeecccC-------CCCce
Confidence 124447999999999 7775 899999999999999 7877777653211 12389
Q ss_pred EEEeCCCCCEEEEEecCCeEEEEeCCCCCCCc-cceeeecCCccEEEEEeccCC---CCEEEEeeCCCcEEEEecCCCCC
Q 016032 121 GMDINPEKGVVLVADNFGFLYLVDARTNSRSG-EAILIHRKGSKVVGLHCNPIQ---PELLLSCGNDHFARIWDIRRLEA 196 (396)
Q Consensus 121 ~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~ 196 (396)
+++|+|++.+|++++.+|.+++|++....... .......+...|.+++|+| + +.+|++++.|+.|++||+++...
T Consensus 154 ~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 154 AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 99999999999999999999999998876543 2223345566899999999 8 88999999999999999986543
Q ss_pred CCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee--eccc---------------ccccCCc
Q 016032 197 GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV--HSHD---------------FNRHLTP 259 (396)
Q Consensus 197 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~---------------~~~~~~~ 259 (396)
...+ ..+|...|.+++|+ ++.+|++++.|+.|++||+.+++.+....... .... .......
T Consensus 233 ~~~~-~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 233 VDKW-LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp EEEE-CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeee-ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 2221 23689999999999 99999999999999999999887643221100 0000 0111223
Q ss_pred eeEEeCCCCCCCceeeEeeeeeeecccc-cccceEEEEc--Ccc---chhhhhcCCCCCCCcceeeeccCCcEEEeec--
Q 016032 260 FRAEWDPKDPSESLAVIGRYISENYNGA-ALHPIDFIDI--TTG---QLVAEVMDPNITTISPVNKLHPRDDVLASGS-- 331 (396)
Q Consensus 260 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~d~~i~vwd~--~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-- 331 (396)
..+.|+|+ +++++ +++ .++.|++|++ .++ +.+..+..+ ..+.++ +|+|++.++++++
T Consensus 311 ~~i~~~~~---------~~~l~---~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~-~~~~~~~~v~~~~~~ 375 (450)
T 2vdu_B 311 SKIIKSKN---------LPFVA---FFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISL-SAHNDEFQVTLDNKE 375 (450)
T ss_dssp EEEEECSS---------SSEEE---EEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEE-EEETTEEEEEECCTT
T ss_pred EEEEEeCC---------CCEEE---EEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEE-EecCCcEEEEEeccc
Confidence 46788886 66666 455 7899999999 555 556666665 667777 8999655554444
Q ss_pred -----CCcEEEEcCCC
Q 016032 332 -----SRSIFIWRPKE 342 (396)
Q Consensus 332 -----d~~i~iw~~~~ 342 (396)
+..|.+|.+..
T Consensus 376 ~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 376 SSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CCSSCCCSEEEEEEET
T ss_pred CCCCCCcceEEEEEEc
Confidence 23478887643
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-34 Score=246.40 Aligned_cols=297 Identities=9% Similarity=0.022 Sum_probs=209.1
Q ss_pred CCCCCCCCccceeeeccccCCeEE-------EEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEec
Q 016032 2 KPAHVIPDQVNCAVIRYHSRRVTC-------LEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP 74 (396)
Q Consensus 2 ~p~~~~~~~~~~~~~~~h~~~v~~-------~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 74 (396)
.|+|++-........+.....+.. ..+.+++ .+|++|+.||.|++||+.+++....+. ...|.++.|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~ 86 (343)
T 3lrv_A 11 APKWPILKNLELLQAQNYSRNIKTFPYKELNKSMYYDK-WVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHP 86 (343)
T ss_dssp CCCCCCCCEEEEEEEEECCTTSEECCEEEECSSSSEEE-EEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCC
T ss_pred CCCCchhhcceeEEEEecccccccCChhhhhhhhcCCC-CEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCC
Confidence 467776554443333333333332 2344566 689999999999999999887776663 56788888987
Q ss_pred CCCcEEEEEeCCCeEEEEECCC---------CcccceeecCCCCCCCCCcceeeeEEEeCC--CCCEEEEEecCCeEEEE
Q 016032 75 TNDGTVYAASSDGTVSCTDLET---------GLALSLMNVNPNGWHGPRTWRMLYGMDINP--EKGVVLVADNFGFLYLV 143 (396)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~i~ 143 (396)
. +++++.|++|++|+... ++.+..+.... ...|.+++|+| +++++++++.||.|++|
T Consensus 87 ~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 87 A----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS--------ANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp S----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC--------SSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred c----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC--------CCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 5 99999999999997763 33232322111 12399999999 99999999999999999
Q ss_pred eCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC-CccccCCCCCceeEEEEcCCCCEEE
Q 016032 144 DARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG-SSLCDLPHKRVVNSAYFSPSGSKIL 222 (396)
Q Consensus 144 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~ 222 (396)
|++++..... ....+...+.+++|+| ++.+|++|+.|+.|++||+++.+.. ..+ ...|..+|++++|+|++.+|+
T Consensus 155 d~~~~~~~~~--~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~-~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 155 SYEDDSQYIV--HSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRF-PVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp ESSSSCEEEE--ECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEEC-CCCTTSCEEEEEECTTSSEEE
T ss_pred ECCCCcEEEE--EecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEE-eccCCCCEEEEEEeCCCCEEE
Confidence 9998765221 1123344699999999 9999999999999999999876553 222 114899999999999999999
Q ss_pred EEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc-ccceEEEEcCccc
Q 016032 223 TTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA-LHPIDFIDITTGQ 301 (396)
Q Consensus 223 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-d~~i~vwd~~~~~ 301 (396)
+++ ++.|++||+++++.......... +.. ......++|+|+ |++++ +++. ++.|++|++.++.
T Consensus 231 s~~-~~~v~iwd~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~---------g~~l~---~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 231 VEC-DQTVVCFDLRKDVGTLAYPTYTI-PEF--KTGTVTYDIDDS---------GKNMI---AYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEE-SSBEEEEETTSSTTCBSSCCCBC--------CCEEEEECTT---------SSEEE---EEETTTTEEEEEEECTTT
T ss_pred EEe-CCeEEEEEcCCCCcceeeccccc-ccc--cccceEEEECCC---------CCEEE---EecCCCCcEEEEEEcccc
Confidence 999 55999999998776432221100 000 000035899998 78887 5666 8999999997654
Q ss_pred hhhhhcCCCCCCCcceeeecc---CCcEEEeec-CCcEEEEcC
Q 016032 302 LVAEVMDPNITTISPVNKLHP---RDDVLASGS-SRSIFIWRP 340 (396)
Q Consensus 302 ~~~~~~~~~~~~i~~~~~~~~---~~~~l~sg~-d~~i~iw~~ 340 (396)
..... ..+..+ +|++ +...|++++ |+.+.++-.
T Consensus 295 ~~~~~-----~~~~~~-~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 295 KNWTK-----DEESAL-CLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp CSEEE-----EEEEEC-CC----CCCCEEEEEEETTEEEEEEE
T ss_pred cceEe-----cCceeE-ecCccccccceeEEEecCCceEEEEe
Confidence 33222 223334 6888 888888888 999988753
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-34 Score=254.73 Aligned_cols=280 Identities=13% Similarity=0.114 Sum_probs=202.1
Q ss_pred ceeeeccccCCeEEEEecCC----C---CcEEEEEeCCCcEEEeeccccee-----eeEecCCc-----ccceeEEEEe-
Q 016032 12 NCAVIRYHSRRVTCLEFHPT----N---NHILLSGDKKGQVGVWDFYKVSE-----KIVYGNIH-----SCIVNNIRFN- 73 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~----~---~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~-----~~~v~~~~~~- 73 (396)
.+..+.+|...|++++|+|+ + . +|++++.||.|++|++.+... ...+ ..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELC-LVATTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEEC
T ss_pred cceEEecCCCcEEEEEEecccccCCcccc-EEEEEcCCCCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEee
Confidence 67889999999999999998 5 4 799999999999999998765 5444 567 5899999999
Q ss_pred ---cCCCcE-EEEEeCCCeEEEEECCC------Ccccc-----eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC
Q 016032 74 ---PTNDGT-VYAASSDGTVSCTDLET------GLALS-----LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG 138 (396)
Q Consensus 74 ---~~~~~~-l~s~~~dg~v~iwd~~~------~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g 138 (396)
|+ +.+ |++++.||.|++||+.+ ++.+. .+...... ...+...+.+++|+|++ ++++++.+|
T Consensus 132 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 132 SNDRL-LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES--PMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp CC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC--SSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred ccCCC-CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc--ccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 98 888 99999999999999998 66655 44220000 01112338999999999 999999999
Q ss_pred eEEEEeCCCCCCCccceeeecC---CccEEEEEeccCCCCEEEEeeCC---CcEEEEecCCCCCCCccccC---------
Q 016032 139 FLYLVDARTNSRSGEAILIHRK---GSKVVGLHCNPIQPELLLSCGND---HFARIWDIRRLEAGSSLCDL--------- 203 (396)
Q Consensus 139 ~i~i~d~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~--------- 203 (396)
.|++||++++...........+ ...+.+++|+| ++.+|++++.| +.|++||+++.+....+...
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------C
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccc
Confidence 9999999986544322111114 66899999999 99999999999 99999999875543333210
Q ss_pred --CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccc------------cc-cCCceeEEeCCCC
Q 016032 204 --PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDF------------NR-HLTPFRAEWDPKD 268 (396)
Q Consensus 204 --~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~ 268 (396)
.|...|.+++|+|++++|++++.||.|++||+++++.............. .. ......+.|+|+.
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 18899999999999999999999999999999988764322200000000 00 2234578999982
Q ss_pred CCCce-eeEeeeeeeecccccccceEEEEcCccc
Q 016032 269 PSESL-AVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 269 ~~~~~-~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
..... ...+++++ +++.|+.|++|++.+|+
T Consensus 367 ~~~~~~~~~~~~l~---s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 367 WRSGMGADLNESLC---CVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSBSTTCTTSCEEE---EEETTTEEEEEEEEC--
T ss_pred ccccccccccceEE---EecCCCcEEEEEcCCCC
Confidence 10000 00015666 78999999999998764
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-33 Score=251.03 Aligned_cols=274 Identities=19% Similarity=0.270 Sum_probs=202.7
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc----------ceeeeEecCCcccceeEEEEecCCCc-EEE
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK----------VSEKIVYGNIHSCIVNNIRFNPTNDG-TVY 81 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~ 81 (396)
...+.+|.+.|++++|+|+++.+|++++.||.|++|++.+ ......+ .+|...|.+++|+|+ +. +|+
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~-~~~~l~ 198 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKEGYGLSWNPN-LNGYLL 198 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSCCCCEEECTT-STTEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCCeEEEEeCCC-CCCeEE
Confidence 3566789999999999998547999999999999999986 3444444 679999999999999 55 999
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeCCCCCCCccceeeecC
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRK 160 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~ 160 (396)
+++.||.|++|++.++...............+. ..|.+++|+| ++.+|++++.+|.|++||++.............+
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHT--AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCS--SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCC--CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 999999999999988543211100000111111 3399999999 6789999999999999999987433333344566
Q ss_pred CccEEEEEeccCCCC-EEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCC-EEEEEeCCCcEEEEEccc
Q 016032 161 GSKVVGLHCNPIQPE-LLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGS-KILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 237 (396)
...|++++|+| ++. +|++|+.||.|++||+++... .+..+ .|...|.+++|+|++. +|++++.|+.|++||+..
T Consensus 277 ~~~v~~i~~~p-~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 277 TAEVNCLSFNP-YSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCeEEEEeCC-CCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 67899999999 554 799999999999999986432 22223 6889999999999885 689999999999999975
Q ss_pred ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcce
Q 016032 238 GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPV 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 317 (396)
....... ....++ ..+++..+.+|. ..+..+
T Consensus 354 ~~~~~~~----------------------------------------~~~~~~--------~~~~~~~~~~h~-~~v~~~ 384 (430)
T 2xyi_A 354 IGEEQST----------------------------------------EDAEDG--------PPELLFIHGGHT-AKISDF 384 (430)
T ss_dssp TTCCCCH----------------------------------------HHHHHC--------CTTEEEECCCCS-SCEEEE
T ss_pred CccccCc----------------------------------------cccccC--------CcceEEEcCCCC-CCceEE
Confidence 3321000 000000 012222333443 667788
Q ss_pred eeeccCCc-EEEeec-CCcEEEEcCCCc
Q 016032 318 NKLHPRDD-VLASGS-SRSIFIWRPKEK 343 (396)
Q Consensus 318 ~~~~~~~~-~l~sg~-d~~i~iw~~~~~ 343 (396)
+|+|+++ +|++++ ||.|+||++...
T Consensus 385 -~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 385 -SWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp -EECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred -EECCCCCCEEEEEECCCCEEEeEcccc
Confidence 8999999 888888 999999998654
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-35 Score=255.86 Aligned_cols=256 Identities=9% Similarity=0.099 Sum_probs=191.1
Q ss_pred CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC--cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCe
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG--LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF 139 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~ 139 (396)
.+..+|++++|+|+ +.+|++++.|+.|++||+.++ +....+..+.. .|.+++|+|++++|++++.|+.
T Consensus 9 ~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~---------~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK---------IVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp ECSSCCSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS---------CEEEEEECTTTCCEEEEETTSS
T ss_pred cCCCcEEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCc---------eEEEEEEeCCCCEEEEEeCCCe
Confidence 36789999999999 999999999999999999987 55555543332 3999999999999999999999
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-C-CCCceeEEEEcCC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-P-HKRVVNSAYFSPS 217 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~-~~~~i~~~~~~~~ 217 (396)
|++||+.++...........+...|.+++|+| ++.+|++++.|+.|++||+++.+.......+ . |...|.+++|+|+
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 99999998763333334556677899999999 9999999999999999999876532223333 3 8999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccccccCCCc---------ceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc
Q 016032 218 GSKILTTSQDNRLRIWDSIFGNLDSPSR---------EIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA 288 (396)
Q Consensus 218 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 288 (396)
+++|++++.|+.|++||++......... .......+........+.|+|+ |++++ +++.
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---------~~~l~---~~~~ 225 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS---------GNALA---YAGH 225 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT---------SSCEE---EEET
T ss_pred CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC---------CCEEE---EEeC
Confidence 9999999999999999997554322100 0001111222223457899998 77777 7899
Q ss_pred ccceEEEEcCccch----hhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCC
Q 016032 289 LHPIDFIDITTGQL----VAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKE 342 (396)
Q Consensus 289 d~~i~vwd~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~ 342 (396)
|+.|++||+.+++. +..+..|. ..+.++ +|+|++++|++|+++.+.+|+...
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~~-~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLSQ-LPLRSL-LWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECSS-SCEEEE-EEEETTEEEEEESSSSEEEECCCC
T ss_pred CCcEEEEECCCCCCcceeeEeecCCC-CceEEE-EEcCCCCEEEEEcCCcEEEEEeCC
Confidence 99999999999987 77777776 678888 899999999999965566777653
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.8e-33 Score=244.39 Aligned_cols=262 Identities=14% Similarity=0.114 Sum_probs=196.5
Q ss_pred CCCCCccceeeec--cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEE
Q 016032 5 HVIPDQVNCAVIR--YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVY 81 (396)
Q Consensus 5 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~ 81 (396)
|++........+. +|.+.|.+++|+|++..+|++++.|+.|++||+.+........ ..|...|.+++|+|+ +.+|+
T Consensus 101 wd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 179 (383)
T 3ei3_B 101 WDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVS-RQMLA 179 (383)
T ss_dssp EETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETT-TTEEE
T ss_pred EeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCC-CCEEE
Confidence 5666655555554 7999999999999433789999999999999999643332221 335588999999999 99999
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCccceeeecC
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAILIHRK 160 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~ 160 (396)
+++.|+.|++||+ +++.+..+..+.. .|.+++|+|++. ++++++.|+.|++||+++............+
T Consensus 180 ~~~~d~~i~i~d~-~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 249 (383)
T 3ei3_B 180 TGDSTGRLLLLGL-DGHEIFKEKLHKA---------KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH 249 (383)
T ss_dssp EEETTSEEEEEET-TSCEEEEEECSSS---------CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC
T ss_pred EECCCCCEEEEEC-CCCEEEEeccCCC---------cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC
Confidence 9999999999999 4666666654433 399999999998 9999999999999999986544444444457
Q ss_pred CccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-----CCC----------CceeEEEEcCCCCEEEEEe
Q 016032 161 GSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-----PHK----------RVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----~~~----------~~i~~~~~~~~~~~l~~~~ 225 (396)
...|.+++|+|.++.+|++++.|+.|++||+++.+....+... .|. ..+..++|+|++++ +++
T Consensus 250 ~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s 327 (383)
T 3ei3_B 250 EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLN 327 (383)
T ss_dssp SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTT
T ss_pred CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccC
Confidence 7799999999977889999999999999999876654433211 122 33445666777666 777
Q ss_pred CCCcEEEEEcccccccCCCcceeecccccccCCce-eEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc
Q 016032 226 QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPF-RAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299 (396)
Q Consensus 226 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~ 299 (396)
.|+.|++||+.+++.+.... ...+...+ .++|+|+ |++++ +|+ |+.|++||+.+
T Consensus 328 ~d~~i~iwd~~~~~~~~~l~-------~~~~~~~~~~~~~s~~---------g~~l~---s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 328 DKRTIDIYDANSGGLVHQLR-------DPNAAGIISLNKFSPT---------GDVLA---SGM-GFNILIWNRED 382 (383)
T ss_dssp CCCCEEEEETTTCCEEEEEC-------BTTBCSCCCEEEECTT---------SSEEE---EEE-TTEEEEEECC-
T ss_pred CCCeEEEEecCCCceeeeec-------CCCCCceEEEEEEecC---------ccEEE---Eec-CCcEEEEecCC
Confidence 89999999999887633211 11122223 4589998 77777 565 89999999864
No 93
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.7e-33 Score=245.67 Aligned_cols=277 Identities=10% Similarity=0.020 Sum_probs=204.3
Q ss_pred CCCCCcc--ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEe-cCCcccceeEEEEecCCCcEEE
Q 016032 5 HVIPDQV--NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRFNPTNDGTVY 81 (396)
Q Consensus 5 ~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~ 81 (396)
|++.... .+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++..... ...|...|.+++|+|+ +.+|+
T Consensus 35 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 112 (372)
T 1k8k_C 35 YEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN-EKKFA 112 (372)
T ss_dssp EEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT-SSEEE
T ss_pred EeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC-CCEEE
Confidence 4444554 678899999999999999998 68999999999999999887644332 2568999999999999 89999
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCC------------
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNS------------ 149 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~------------ 149 (396)
+++.|+.|++||+..+........... .+...+.+++|+|++.+|++++.+|.|++||++...
T Consensus 113 ~~~~d~~v~i~d~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 113 VGSGSRVISICYFEQENDWWVCKHIKK-----PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp EEETTSSEEEEEEETTTTEEEEEEECT-----TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred EEeCCCEEEEEEecCCCcceeeeeeec-----ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccccccc
Confidence 999999999999998764222111101 011339999999999999999999999999975321
Q ss_pred ---CCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeC
Q 016032 150 ---RSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 150 ---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
..........+...+.+++|+| ++.+|++++.|+.|++||+++.+....+. .|...|.+++|+|++.+|+++ .
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~ 263 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLA--SETLPLLAVTFITESSLVAAG-H 263 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEE--CSSCCEEEEEEEETTEEEEEE-T
T ss_pred ccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEc--cCCCCeEEEEEecCCCEEEEE-e
Confidence 0111122335666899999999 99999999999999999998755433332 578899999999999988887 8
Q ss_pred CCcEEEEEccc--ccc--cCCCcc----------------------eee------cccccccCCc-eeEEeCCCCCCCce
Q 016032 227 DNRLRIWDSIF--GNL--DSPSRE----------------------IVH------SHDFNRHLTP-FRAEWDPKDPSESL 273 (396)
Q Consensus 227 d~~i~iwd~~~--~~~--~~~~~~----------------------~~~------~~~~~~~~~~-~~~~~~~~~~~~~~ 273 (396)
|+.|++|++.+ +.. ...... ... ......|..+ ..+.|.+.+
T Consensus 264 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----- 338 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGG----- 338 (372)
T ss_dssp TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEEST-----
T ss_pred CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCC-----
Confidence 99999999988 421 100000 000 0111133333 345555432
Q ss_pred eeEe---eeeeeecccccccceEEEEcCccchh
Q 016032 274 AVIG---RYISENYNGAALHPIDFIDITTGQLV 303 (396)
Q Consensus 274 ~~~g---~~~~~~~~g~~d~~i~vwd~~~~~~~ 303 (396)
| .+++ +|+.||.|++|++.+++.+
T Consensus 339 ---g~~~~~l~---s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 339 ---KAKCSQFC---TTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp ---TTSCSEEE---EEETTSEEEEEEHHHHHHH
T ss_pred ---CcceeeEE---EecCCCceEEEEecChhHh
Confidence 4 6777 8999999999999887654
No 94
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=248.76 Aligned_cols=268 Identities=10% Similarity=0.039 Sum_probs=193.9
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
+.-...|.+++|+||| +++||++.|++|+ |....+ .+ .+|...|.+++|+|+ + .++.+.+|+
T Consensus 12 ~~~~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~---~l-~gh~~~v~~V~FsPd-g-------~~~~~~~~~--- 73 (588)
T 2j04_A 12 KEFEDWKNNLTWARDG-TLYLTTFPDISIG--QPKYAK---DI-NCNSKNLFHVKEFPL-E-------FENKLDFEL--- 73 (588)
T ss_dssp CCCSSSSCCEEECTTS-CEEEECSSSEEEE--EECCCS---CC-SSBGGGTEEEEEECC-C-------CCCTTTTSC---
T ss_pred hHhhccEEEEEECCCC-CEEEEEcCCceee--cccccc---ee-cCCCccEEEEEECCC-C-------CcceEEEEe---
Confidence 3456889999999999 7999999999999 644443 23 689999999999999 5 455555554
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC-----ccEEEEEecc
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG-----SKVVGLHCNP 171 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~-----~~i~~~~~~~ 171 (396)
++....+..... ..|.+++|+|+|..|++++.+|.|++||... .. . ... +. ..+.+++|+|
T Consensus 74 ~~~~~~~~~~~~--------~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l-~--~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 74 AQQNGLLNSQPV--------CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML-T--NLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp CCSSCSSTTSCS--------CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE-E--ECC-CSSCSTTTCEEEEEECS
T ss_pred CCCceEeecCCC--------CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee-e--ecc-CCCccccccEEEEEEcC
Confidence 433333322111 2399999999999999999999999999544 11 1 112 22 2599999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCC----cccc-----CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccC
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGS----SLCD-----LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 242 (396)
++++|++|+.||+|++||+....... .+.. .+|...|.+++|+|+| +++++.|++|++||+.++....
T Consensus 140 -DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 140 -IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp -SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred -CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence 99999999999999999998753211 1122 3577899999999999 8888899999999998766421
Q ss_pred CCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeee--
Q 016032 243 PSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKL-- 320 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~-- 320 (396)
....+... .......++|+ |++++ +++ ++.|++||+.+++......+| ...+..+ +|
T Consensus 217 ~~~tL~~~----h~~~V~svaFs-----------g~~LA---Sa~-~~tIkLWd~~~~~~~~~~~gh-~~~V~~v-a~~~ 275 (588)
T 2j04_A 217 VSRMIQNA----SRRKITDLKIV-----------DYKVV---LTC-PGYVHKIDLKNYSISSLKTGS-LENFHII-PLNH 275 (588)
T ss_dssp CEEEEECC----CSSCCCCEEEE-----------TTEEE---EEC-SSEEEEEETTTTEEEEEECSC-CSCCCEE-EETT
T ss_pred ceeeeccc----ccCcEEEEEEE-----------CCEEE---EEe-CCeEEEEECCCCeEEEEEcCC-CceEEEE-Eeee
Confidence 00111000 11222355665 33444 344 589999999988774333354 4888888 89
Q ss_pred ccCCcEEEeec-CCcEEEEcCC
Q 016032 321 HPRDDVLASGS-SRSIFIWRPK 341 (396)
Q Consensus 321 ~~~~~~l~sg~-d~~i~iw~~~ 341 (396)
+|++..|++++ ||. ++|..+
T Consensus 276 s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 276 EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCEEEEECSSCEE-EEEESS
T ss_pred CCCCCEEEEEcCCCC-EEEeec
Confidence 99999999999 999 999875
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-32 Score=242.78 Aligned_cols=267 Identities=13% Similarity=0.180 Sum_probs=208.4
Q ss_pred CCCCCccceeeec--cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEE
Q 016032 5 HVIPDQVNCAVIR--YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 5 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 82 (396)
|+..++...+.+. +|.+.|++|+|+|+| ++||+|+.||.|+|||+.+++.+..+ .+|...+.++.|+ +..|++
T Consensus 130 Wd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~~-~~h~~~v~~~s~~---~~~l~s 204 (420)
T 4gga_A 130 WSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNM-TSHSARVGSLSWN---SYILSS 204 (420)
T ss_dssp EETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEE---TTEEEE
T ss_pred EECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEEE-eCCCCceEEEeeC---CCEEEE
Confidence 7777777666554 678889999999999 68999999999999999999888777 7899999999886 569999
Q ss_pred EeCCCeEEEEECCCCccc-ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc-ceeeecC
Q 016032 83 ASSDGTVSCTDLETGLAL-SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE-AILIHRK 160 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~-~~~~~~~ 160 (396)
|+.|+.+++||....... ..+..+.. .+..+.++|++.++++++.|+.+++|+...+..... ......+
T Consensus 205 gs~d~~i~~~d~~~~~~~~~~~~~h~~---------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~ 275 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAEHHVATLSGHSQ---------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH 275 (420)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSS---------CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC
T ss_pred EeCCCceeEeeecccceeeEEeccccc---------ceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc
Confidence 999999999998875443 33333322 288999999999999999999999999988654332 2234556
Q ss_pred CccEEEEEeccCCCCEEEEe--eCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe--CCCcEEEEEcc
Q 016032 161 GSKVVGLHCNPIQPELLLSC--GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS--QDNRLRIWDSI 236 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l~~~--~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~iwd~~ 236 (396)
...|.+++|+|.+..+++++ +.|+.|++||++++... ..+.+...+.++.|+|++..+++++ .|+.|++||+.
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~---~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL---SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE---EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc---eeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 67899999999667777664 57999999999875543 3334556799999999999988765 68999999999
Q ss_pred cccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC
Q 016032 237 FGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
+++.+.. +.+|.. ...++|+|+ |++++ +|+.|++|+|||+.+.........+
T Consensus 353 ~~~~v~~---------l~gH~~~V~~l~~spd---------g~~l~---S~s~D~tvriWdv~~~~~~~~~~~~ 405 (420)
T 4gga_A 353 TMAKVAE---------LKGHTSRVLSLTMSPD---------GATVA---SAAADETLRLWRCFELDPARRRERE 405 (420)
T ss_dssp TCCEEEE---------ECCCSSCEEEEEECTT---------SSCEE---EEETTTEEEEECCSCSSCC------
T ss_pred CCcEEEE---------EcCCCCCEEEEEEcCC---------CCEEE---EEecCCeEEEEECCCCCccchhhhc
Confidence 8876432 223333 357899998 78888 8999999999999876655554433
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-33 Score=243.34 Aligned_cols=272 Identities=12% Similarity=0.143 Sum_probs=217.4
Q ss_pred CCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 4 AHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.|++.+...+..+.+|.+.|.+++|+|++ ++|++++.||.|++||+.++.....+. |...|.+++|+|+ +.+|+++
T Consensus 58 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~-~~~l~~~ 133 (369)
T 3zwl_B 58 VWYSLNGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPC-GNYFLAI 133 (369)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTT-SSEEEEE
T ss_pred EEeCCCchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccC-CCEEEEe
Confidence 37778888899999999999999999998 689999999999999999988888775 8899999999999 9999999
Q ss_pred eCC-----CeEEEEECCCCcccceeecCCCC----CCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccc
Q 016032 84 SSD-----GTVSCTDLETGLALSLMNVNPNG----WHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEA 154 (396)
Q Consensus 84 ~~d-----g~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~ 154 (396)
+.+ +.|++||+..+.....+...... ...+.....+.+++|+|+++++++++.+|.|++||+++......
T Consensus 134 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~- 212 (369)
T 3zwl_B 134 LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVD- 212 (369)
T ss_dssp ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEE-
T ss_pred cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEE-
Confidence 998 99999999877654333221110 01111112499999999999999999999999999988432222
Q ss_pred eeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC------
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN------ 228 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~------ 228 (396)
....+...|.+++|+| ++.+|++++.|+.|++||+++.+. +..+.+...+.+++|+|++.++++++.++
T Consensus 213 -~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 287 (369)
T 3zwl_B 213 -SIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQV---LKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTT 287 (369)
T ss_dssp -EEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECCC------
T ss_pred -EEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCce---eeeecCCCCceeEEecCCCceEEEeecCCCceEEE
Confidence 3344566899999999 999999999999999999987544 33334778899999999999999999988
Q ss_pred --------cEEEEEcccccccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc
Q 016032 229 --------RLRIWDSIFGNLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299 (396)
Q Consensus 229 --------~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~ 299 (396)
.+++||+.+++.... +..+ .....+.|+|+ |++++ +++.|+.|++|++.+
T Consensus 288 ~~~~~~~~~i~~~d~~~~~~~~~---------~~~~~~~v~~~~~s~~---------~~~l~---s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 288 TSANEGKFEARFYHKIFEEEIGR---------VQGHFGPLNTVAISPQ---------GTSYA---SGGEDGFIRLHHFEK 346 (369)
T ss_dssp -------CEEEEEETTTCCEEEE---------EECCSSCEEEEEECTT---------SSEEE---EEETTSEEEEEEECH
T ss_pred EecCCCcceeEEEecCCCcchhh---------eecccCcEEEEEECCC---------CCEEE---EEcCCCeEEEEECcc
Confidence 899999988765321 1112 22346899998 77777 789999999999988
Q ss_pred cchhhhh
Q 016032 300 GQLVAEV 306 (396)
Q Consensus 300 ~~~~~~~ 306 (396)
+.....+
T Consensus 347 ~~~~~~~ 353 (369)
T 3zwl_B 347 SYFDFKY 353 (369)
T ss_dssp HHHTCCC
T ss_pred ccchhHH
Confidence 7655443
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.8e-33 Score=249.15 Aligned_cols=266 Identities=12% Similarity=0.126 Sum_probs=190.5
Q ss_pred CCCCCc--cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEE
Q 016032 5 HVIPDQ--VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVY 81 (396)
Q Consensus 5 ~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~ 81 (396)
|++... .....+.+|.+.|++|+|+|.+..+|++|+.||+|+|||+.+........ ..+...+.+++|+|+ +.+|+
T Consensus 147 Wd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 225 (435)
T 4e54_B 147 WNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS-SRMVV 225 (435)
T ss_dssp ECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT-TTEEE
T ss_pred EECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCC-CCEEE
Confidence 555443 33455678999999999999544789999999999999998765443332 234556889999999 99999
Q ss_pred EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCccceeeecC
Q 016032 82 AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAILIHRK 160 (396)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~ 160 (396)
+|+.||.|++||++. +.+..+..+. ..|.+++|+|++. ++++++.|+.|++||++.............|
T Consensus 226 ~g~~dg~i~~wd~~~-~~~~~~~~h~---------~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h 295 (435)
T 4e54_B 226 TGDNVGNVILLNMDG-KELWNLRMHK---------KKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH 295 (435)
T ss_dssp EECSSSBEEEEESSS-CBCCCSBCCS---------SCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC
T ss_pred EEeCCCcEeeeccCc-ceeEEEeccc---------ceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeec
Confidence 999999999999874 4444443332 2399999999876 7888999999999999987766555455567
Q ss_pred CccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCC----CCCceeEEEEcCCCCEEEEEe-----------
Q 016032 161 GSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP----HKRVVNSAYFSPSGSKILTTS----------- 225 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~----------- 225 (396)
...|.+++|+| ++.+|++++.|+.|++||+++......+.... ....+..+.|+|++.+++++.
T Consensus 296 ~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 374 (435)
T 4e54_B 296 RHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTP 374 (435)
T ss_dssp SSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSST
T ss_pred cccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEe
Confidence 77899999999 99999999999999999998765433221110 111234456777777666654
Q ss_pred -CCCcEEEEEcccccccCCCcceeecccccccCCc-ee-EEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 226 -QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTP-FR-AEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 226 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
.++.|++||..+++.+... ...+... .. ..|+|+ |++++ +|+ |+.|+||++++++.
T Consensus 375 ~~~~~i~iwd~~~g~~~~~l--------~~~~~~~v~s~~~fspd---------g~~la---sg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 375 YELRTIDVFDGNSGKMMCQL--------YDPESSGISSLNEFNPM---------GDTLA---SAM-GYHILIWSQQEART 433 (435)
T ss_dssp TCCCCEEEECSSSCCEEEEE--------CCSSCCCCCCEEEECTT---------SSCEE---EEC-SSEEEECCCC----
T ss_pred cCCCEEEEEECCCCcEEEEE--------eCCCCCcEEEEEEECCC---------CCEEE---EEc-CCcEEEEECCcCee
Confidence 2357999999988764211 1111111 23 368998 77777 554 77899999998875
Q ss_pred h
Q 016032 303 V 303 (396)
Q Consensus 303 ~ 303 (396)
.
T Consensus 434 r 434 (435)
T 4e54_B 434 R 434 (435)
T ss_dssp -
T ss_pred e
Confidence 3
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=240.92 Aligned_cols=276 Identities=17% Similarity=0.175 Sum_probs=203.3
Q ss_pred CCCCCccceee-eccccCCeEEEEecCCC--CcEEEEEeCCCcEEEeecccce-eeeEecCCcccceeEEEE------ec
Q 016032 5 HVIPDQVNCAV-IRYHSRRVTCLEFHPTN--NHILLSGDKKGQVGVWDFYKVS-EKIVYGNIHSCIVNNIRF------NP 74 (396)
Q Consensus 5 ~~~~~~~~~~~-~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~------~~ 74 (396)
|++..+..... ..+|...|.+++|+|++ ..+|++|+.||.|++||+.+.. ....+ .+|...|.+++| +|
T Consensus 49 w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~s~ 127 (357)
T 3i2n_A 49 YEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSV-KGHKEIINAIDGIGGLGIGE 127 (357)
T ss_dssp EEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEE-CCCSSCEEEEEEESGGGCC-
T ss_pred EeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEE-EecccceEEEeeccccccCC
Confidence 45555544333 33799999999999983 2689999999999999999887 55555 789999999965 56
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCc-ccceeecCCCCCCCCCcceeeeEEE----eCCCCCEEEEEecCCeEEEEeCCCCC
Q 016032 75 TNDGTVYAASSDGTVSCTDLETGL-ALSLMNVNPNGWHGPRTWRMLYGMD----INPEKGVVLVADNFGFLYLVDARTNS 149 (396)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~~g~i~i~d~~~~~ 149 (396)
+ +.+|++++.||.|++||+.+++ ....+..+.... ...+.+++ |+|++.++++++.+|.|++||++++.
T Consensus 128 ~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 128 G-APEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN-----KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp C-CCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC-----CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred C-ccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC-----CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 7 8899999999999999999887 555554332210 12377777 78999999999999999999999865
Q ss_pred CCccceeeecCCccEEEEEeccC--CCCEEEEeeCCCcEEEEecCCCCCCCcccc---CCCCCceeEEEEcCCCC-EEEE
Q 016032 150 RSGEAILIHRKGSKVVGLHCNPI--QPELLLSCGNDHFARIWDIRRLEAGSSLCD---LPHKRVVNSAYFSPSGS-KILT 223 (396)
Q Consensus 150 ~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~-~l~~ 223 (396)
.. ....+...+.+++|+|. ++.+|++++.||.|++||+++.+....+.. ..|...|.+++|+|++. +|++
T Consensus 202 ~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 202 LR----WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp EE----EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred ee----eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE
Confidence 42 33445568999999985 578999999999999999987655443321 16889999999999998 8999
Q ss_pred EeCCCcEEEEEcccccccCCCc----------ceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccce
Q 016032 224 TSQDNRLRIWDSIFGNLDSPSR----------EIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPI 292 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i 292 (396)
++.||.|++||++++....... .......+..+.. ...+.|+|+ |++++. +++.|+.|
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~--s~~~d~~i 346 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD---------KRGLCV--CSSFDQTV 346 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS---------STTEEE--EEETTSEE
T ss_pred EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC---------CCeEEE--EecCCCcE
Confidence 9999999999998765431100 0011112222222 357889998 554431 47889999
Q ss_pred EEEEcCccch
Q 016032 293 DFIDITTGQL 302 (396)
Q Consensus 293 ~vwd~~~~~~ 302 (396)
++||+.+.+.
T Consensus 347 ~iw~~~~~~~ 356 (357)
T 3i2n_A 347 RVLIVTKLNK 356 (357)
T ss_dssp EEEEECC---
T ss_pred EEEECCCccc
Confidence 9999987654
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.7e-33 Score=240.64 Aligned_cols=259 Identities=10% Similarity=0.069 Sum_probs=204.7
Q ss_pred cCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc---cceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEe
Q 016032 60 GNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA---LSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVAD 135 (396)
Q Consensus 60 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 135 (396)
..+|...|.+++|+|+ +.+|++++.|+.|++|++.++.. ...+..+. ..|.+++|+|+++ +|++++
T Consensus 7 ~~~h~~~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK---------HPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SSCCSSCEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS---------SCEEEEEEEESSSEEEEEEE
T ss_pred ccCCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecC---------CceEEEEECCCCCcEEEEEc
Confidence 3679999999999999 99999999999999999988771 22222222 2399999999999 999999
Q ss_pred cCCeEEEEeC-CCCCCCccceeeec--CCccEEEEEeccCCCCEEEEeeCCCcEEEEecCC---------CCCCCccccC
Q 016032 136 NFGFLYLVDA-RTNSRSGEAILIHR--KGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR---------LEAGSSLCDL 203 (396)
Q Consensus 136 ~~g~i~i~d~-~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~---------~~~~~~~~~~ 203 (396)
.+|.|++||+ ..+.. ..... +...|.+++|+| +.+|++++.|+.|++||+++ .+. +..+
T Consensus 77 ~dg~i~~wd~~~~~~~----~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~ 147 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSF----QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN---SNNT 147 (342)
T ss_dssp TTSCEEEECSSSSSSE----EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESC---SSSS
T ss_pred CCCeEEEEEeccCCce----EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCe---eeEE
Confidence 9999999999 77543 23444 667899999998 78999999999999999975 333 3334
Q ss_pred CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc-ccccCCCcceeecccccccCCceeEEeCC-CCCCCceeeEeeeee
Q 016032 204 PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF-GNLDSPSREIVHSHDFNRHLTPFRAEWDP-KDPSESLAVIGRYIS 281 (396)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 281 (396)
.|...|.+++|+|++ |++++.|+.|++||+++ +.... .. ...........+.|+| + +++++
T Consensus 148 ~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~--~~----~~~~~~~~i~~i~~~~~~---------~~~l~ 210 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG--TI----EESGLKYQIRDVALLPKE---------QEGYA 210 (342)
T ss_dssp SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCC--EE----EECSCSSCEEEEEECSGG---------GCEEE
T ss_pred eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccc--ee----eecCCCCceeEEEECCCC---------CCEEE
Confidence 588899999999887 99999999999999987 44311 00 0111112234788998 7 66777
Q ss_pred eecccccccceEEEEcCcc------chhhhhcCCCC--------CCCcceeeeccCCcEEEeec-CCcEEEEcCCCccee
Q 016032 282 ENYNGAALHPIDFIDITTG------QLVAEVMDPNI--------TTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSEL 346 (396)
Q Consensus 282 ~~~~g~~d~~i~vwd~~~~------~~~~~~~~~~~--------~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~ 346 (396)
+++.++.|++|++... +....+..+.. ..+.++ +|+|++++|++|+ ||.|++||+.+++.+
T Consensus 211 ---~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 211 ---CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSI-EFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp ---EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEE-EECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ---EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEE-EEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 7889999999999877 66667766642 377777 8999999999999 999999999999999
Q ss_pred eecccc-ceEEEe
Q 016032 347 VEQKEE-MKIIVC 358 (396)
Q Consensus 347 ~~~~~~-~~~~~~ 358 (396)
..+..+ ...+.+
T Consensus 287 ~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 287 KNFAKFNEDSVVK 299 (342)
T ss_dssp EECCCCSSSEEEE
T ss_pred hhhhcccCCCceE
Confidence 999887 554443
No 100
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.9e-32 Score=235.98 Aligned_cols=260 Identities=16% Similarity=0.210 Sum_probs=199.7
Q ss_pred cceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 11 VNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
.+...+++|...|.+++|+|++ ++|++|+.|+.|++|+.......... ..+...+..+.+++. +.+|++++.|+.++
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSD-NRQIVSGSRDKTIK 153 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTT-SSCEEEEETTSCEE
T ss_pred eeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecccceeeee-cCCCCceeEEEEeec-CccceeecCCCeEE
Confidence 4567889999999999999999 68999999999999999988777666 567888999999999 89999999999999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
+||+........... ++. ..+..++|+++ ..++++++.|+.|++||++++.... ....+...|.+++
T Consensus 154 ~~d~~~~~~~~~~~~------~~~--~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~---~~~~h~~~v~~~~ 222 (340)
T 4aow_A 154 LWNTLGVCKYTVQDE------SHS--EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT---NHIGHTGYLNTVT 222 (340)
T ss_dssp EECTTSCEEEEECSS------SCS--SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEE---EECCCSSCEEEEE
T ss_pred EEEeCCCceEEEEec------ccc--CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceee---EecCCCCcEEEEE
Confidence 999876544322211 111 23788888876 4678899999999999999876443 3345666899999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
|+| ++.+|++|+.|+.|++||+++.+. +..+.+...|.+++|+|++.++ +++.|+.|++||++++..........
T Consensus 223 ~s~-~~~~l~s~s~Dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~ 297 (340)
T 4aow_A 223 VSP-DGSLCASGGKDGQAMLWDLNEGKH---LYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEV 297 (340)
T ss_dssp ECT-TSSEEEEEETTCEEEEEETTTTEE---EEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-
T ss_pred ECC-CCCEEEEEeCCCeEEEEEeccCce---eeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccc
Confidence 999 999999999999999999986543 3334466789999999987655 55679999999998876543222211
Q ss_pred ecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 249 HSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
.......+. ....++|+|+ |++++ +|+.||.|+|||+.+|+
T Consensus 298 ~~~~~~~h~~~v~~l~~s~d---------g~~l~---sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 298 ISTSSKAEPPQCTSLAWSAD---------GQTLF---AGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ------CCCCCEEEEEECTT---------SSEEE---EEETTSCEEEEEEEC--
T ss_pred eeeeccCCCCCEEEEEECCC---------CCEEE---EEeCCCEEEEEeCCCcC
Confidence 111222222 2357889998 88888 89999999999999885
No 101
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-33 Score=245.50 Aligned_cols=257 Identities=16% Similarity=0.234 Sum_probs=198.2
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
|.+.|++++|+|++ .+|++|+.||.|++|| .++.....+ ..|...|.+++|+|+ +.+|++++.|+.|++||+.+++
T Consensus 107 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~-~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSHDG-NSIVTGVENGELRLWN-KTGALLNVL-NFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECTTS-SEEEEEETTSCEEEEE-TTSCEEEEE-CCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTE
T ss_pred CCCceEEEEEcCCC-CEEEEEeCCCeEEEEe-CCCCeeeec-cCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCc
Confidence 78899999999998 6899999999999999 445555555 679999999999999 9999999999999999999887
Q ss_pred ccceeecCCCC---------------C--------------------------------CCCCcceeeeEEEeCCCCCEE
Q 016032 99 ALSLMNVNPNG---------------W--------------------------------HGPRTWRMLYGMDINPEKGVV 131 (396)
Q Consensus 99 ~~~~~~~~~~~---------------~--------------------------------~~~~~~~~v~~~~~~~~~~~l 131 (396)
.+..+..+... . ....+...+.+++|+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 76655433221 0 001123458999999999999
Q ss_pred EEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeE
Q 016032 132 LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211 (396)
Q Consensus 132 ~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~ 211 (396)
++++.++.|++||++.+.... ....+...+.+++|+| ++ ++++++.|+.|++||+++.+....+. .|...|.+
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~i~~ 335 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQN---CFYGHSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLLALSI--VDGVPIFA 335 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSE---EECCCSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEEEEEE--CTTCCEEE
T ss_pred EEEcCCCEEEEEECCCCccce---EecCCCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEeEecc--cCCccEEE
Confidence 999999999999999876543 2344566899999999 77 99999999999999998755433322 57889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc-----------ceeeccccccc--C-CceeEEeCCCCCCCceeeEe
Q 016032 212 AYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR-----------EIVHSHDFNRH--L-TPFRAEWDPKDPSESLAVIG 277 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~g 277 (396)
++|+|++++|++++.||.|++||+.+++...... .......+..+ . ....+.|+|+ +
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~ 406 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA---------G 406 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT---------S
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC---------C
Confidence 9999999999999999999999998776110000 00011122222 2 4457899998 7
Q ss_pred eeeeeecccccccceEEEEcC
Q 016032 278 RYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 278 ~~~~~~~~g~~d~~i~vwd~~ 298 (396)
++++ +++.|+.|++|++.
T Consensus 407 ~~l~---~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 407 NKIS---VAYSLQEGSVVAIP 424 (425)
T ss_dssp SEEE---EEESSSCCEEEECC
T ss_pred ceEE---EEecCceEEEEeec
Confidence 7777 78999999999985
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=250.71 Aligned_cols=269 Identities=14% Similarity=0.180 Sum_probs=194.3
Q ss_pred CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc-----------cceeecCCCCC---CCCCcceeeeEEEeCCC
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA-----------LSLMNVNPNGW---HGPRTWRMLYGMDINPE 127 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~~---~~~~~~~~v~~~~~~~~ 127 (396)
.+...|.+++|+|+ +.+|++|+.||.|++|++.+++. ...+..+...+ ........|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 37889999999999 99999999999999999998762 44443332000 00000033999999999
Q ss_pred C--CEEEEEecCCeEEEEeCCCCCCCcc-------------------------------------ceeeecCCccEEEEE
Q 016032 128 K--GVVLVADNFGFLYLVDARTNSRSGE-------------------------------------AILIHRKGSKVVGLH 168 (396)
Q Consensus 128 ~--~~l~~~~~~g~i~i~d~~~~~~~~~-------------------------------------~~~~~~~~~~i~~~~ 168 (396)
+ ..|++++.|+.|++||+........ ......|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 8999999999999999876332100 011235667899999
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCC-CCcc-----ccCCCCCceeEEEEcCCC-CEEEEEeCCCcEEEEEccccccc
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEA-GSSL-----CDLPHKRVVNSAYFSPSG-SKILTTSQDNRLRIWDSIFGNLD 241 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~~~-----~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~ 241 (396)
|+| ++.+|++| .|+.|++||+++... ...+ ....|...|.+++|+|++ .+|++|+.||.|++||+++++..
T Consensus 185 ~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999 99999998 799999999974221 1111 122688999999999998 99999999999999999988752
Q ss_pred CCCcceeecccc-------ccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc-cchhhhhcCCCCC
Q 016032 242 SPSREIVHSHDF-------NRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT-GQLVAEVMDPNIT 312 (396)
Q Consensus 242 ~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~-~~~~~~~~~~~~~ 312 (396)
.........+.. ..+ .....+.|+|+ |++++ +++. +.|++||+.+ ++.+..+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------g~~l~---~~~~-~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS---------GRYMM---TRDY-LSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTT---------SSEEE---EEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCC---------CCEEE---EeeC-CeEEEEeCCCCccccceeeccccc
Confidence 211111111100 000 13457899998 77777 6677 9999999997 8888888776421
Q ss_pred C--------------CcceeeeccCCcEEEeec-CCcEEEEcCCCcceee
Q 016032 313 T--------------ISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELV 347 (396)
Q Consensus 313 ~--------------i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~ 347 (396)
. +..+ +|+|++++|++|+ ||.|++||+.+++.+.
T Consensus 330 ~~~l~~~~~~~~i~~~~~~-~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFEC-CWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCE-EECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred cccccccccccccccceEE-EECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 0 1125 8999999999999 9999999999988653
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-32 Score=233.04 Aligned_cols=257 Identities=18% Similarity=0.141 Sum_probs=203.3
Q ss_pred eeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe
Q 016032 56 KIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135 (396)
Q Consensus 56 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 135 (396)
......+|...|.+++| |+ +.+|++++.||.|++||+.+++....+..+... +.+++|+|++.++++++
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VD-DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF---------LNSVCYDSEKELLLFGG 78 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EE-TTEEEEEETTSEEEEEEESSSEEEEEEEECSSC---------EEEEEEETTTTEEEEEE
T ss_pred HHHHhhCCCCCcEEEEe-cC-CCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc---------EEEEEECCCCCEEEEec
Confidence 33334789999999999 88 889999999999999999988877777655433 99999999999999999
Q ss_pred cCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEc
Q 016032 136 NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFS 215 (396)
Q Consensus 136 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~ 215 (396)
.+|.|++|++..............+...+.+++|. +.++++++.|+.|++||.. +. ......|...+.+++|+
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d~~--~~--~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWKEG--SL--VYNLQAHNASVWDAKVV 151 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETT--EE--EEEEECCSSCEEEEEEE
T ss_pred CCCeEEEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEcCC--cE--EEecccCCCceeEEEEc
Confidence 99999999998765444444556677789999994 5799999999999999932 22 11222688999999999
Q ss_pred C-CCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEE
Q 016032 216 P-SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDF 294 (396)
Q Consensus 216 ~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~v 294 (396)
| ++.+|++++.|+.|++||...... ............+.|+|+ +. ++ +++.++.|++
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d~~~~~~---------~~~~~~~~~i~~~~~~~~---------~~-~~---~~~~dg~i~i 209 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQNDKVIK---------TFSGIHNDVVRHLAVVDD---------GH-FI---SCSNDGLIKL 209 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEETTEEEE---------EECSSCSSCEEEEEEEET---------TE-EE---EEETTSEEEE
T ss_pred cCCCCEEEEEECCCCEEEEecCceEE---------EEeccCcccEEEEEEcCC---------Ce-EE---EccCCCeEEE
Confidence 8 999999999999999999432211 111112222346788887 55 34 5889999999
Q ss_pred EEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccceE
Q 016032 295 IDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMKI 355 (396)
Q Consensus 295 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~~ 355 (396)
||+.+++.+..+..|. ..+.++ +|+|++. |++++ ||.|++||+.+++.+..+..+...
T Consensus 210 ~d~~~~~~~~~~~~~~-~~i~~~-~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 268 (313)
T 3odt_A 210 VDMHTGDVLRTYEGHE-SFVYCI-KLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAIS 268 (313)
T ss_dssp EETTTCCEEEEEECCS-SCEEEE-EECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSC
T ss_pred EECCchhhhhhhhcCC-ceEEEE-EEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCce
Confidence 9999999998888776 778888 8999995 66777 999999999999998888777643
No 104
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-32 Score=231.00 Aligned_cols=215 Identities=17% Similarity=0.242 Sum_probs=171.2
Q ss_pred ccceeeeccccCCeEEEEecCC--CCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCC-CcEEEEEe
Q 016032 10 QVNCAVIRYHSRRVTCLEFHPT--NNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTN-DGTVYAAS 84 (396)
Q Consensus 10 ~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~ 84 (396)
...+..+.+|.++|++++|+|+ + .+|++|+.|++|+|||+.++. ....+ .+|...|.+++|+|+. +.+|++++
T Consensus 43 ~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s 120 (297)
T 2pm7_B 43 HKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVAS 120 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred cEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEE
Confidence 3567899999999999999864 5 689999999999999998764 33333 6799999999999963 57999999
Q ss_pred CCCeEEEEECCCCccc--ceeecCCCCCCCCCcceeeeEEEeCCC-------------CCEEEEEecCCeEEEEeCCCCC
Q 016032 85 SDGTVSCTDLETGLAL--SLMNVNPNGWHGPRTWRMLYGMDINPE-------------KGVVLVADNFGFLYLVDARTNS 149 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~~g~i~i~d~~~~~ 149 (396)
.|+.|++||++++... ..+..+. ..+.+++|+|+ +++|++|+.|+.|++||++...
T Consensus 121 ~d~~v~~wd~~~~~~~~~~~~~~h~---------~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 121 SDGKVSVVEFKENGTTSPIIIDAHA---------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp TTSEEEEEEBCSSSCBCCEEEECCS---------SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred CCCcEEEEEecCCCceeeeeeeccc---------CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 9999999999876432 2222222 23899999997 5799999999999999998765
Q ss_pred CCccc-eeeecCCccEEEEEeccCC---CCEEEEeeCCCcEEEEecCCCCCC---CccccCCCCCceeEEEEcCCCCEEE
Q 016032 150 RSGEA-ILIHRKGSKVVGLHCNPIQ---PELLLSCGNDHFARIWDIRRLEAG---SSLCDLPHKRVVNSAYFSPSGSKIL 222 (396)
Q Consensus 150 ~~~~~-~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~ 222 (396)
..... .....|...|.+++|+| + +.+|++++.|++|++||++..... ..+....|...|.+++|+|++++|+
T Consensus 192 ~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 192 QTYVLESTLEGHSDWVRDVAWSP-TVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp TEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEE
T ss_pred ceEEEEEEecCCCCceEEEEECC-CCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEE
Confidence 32211 23445677899999999 6 489999999999999999764321 1221135778999999999999999
Q ss_pred EEeCCCcEEEEEcc
Q 016032 223 TTSQDNRLRIWDSI 236 (396)
Q Consensus 223 ~~~~d~~i~iwd~~ 236 (396)
+++.|+.|++|+..
T Consensus 271 s~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 271 LSGGDNKVTLWKEN 284 (297)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EEcCCCcEEEEEEC
Confidence 99999999999975
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.9e-32 Score=238.82 Aligned_cols=287 Identities=16% Similarity=0.179 Sum_probs=191.9
Q ss_pred cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCC--CcEEEEEeCCCeEEEEECC
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTN--DGTVYAASSDGTVSCTDLE 95 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~ 95 (396)
+|...|.+++|+|++..+|++++.||.|++||+.++.....+. +...+.++.|+|.. +.++++++.++.|++||+.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 6999999999999554789999999999999999988877764 78899999999862 4499999999999999999
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCccce-------------eeecCC
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAI-------------LIHRKG 161 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~-------------~~~~~~ 161 (396)
+++....+..+.. .+.+++|+|++. .+++++.+|.|++||++......... ....+.
T Consensus 175 ~~~~~~~~~~~~~---------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T 4a11_B 175 SGSCSHILQGHRQ---------EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN 245 (408)
T ss_dssp SSCCCEEECCCCS---------CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS
T ss_pred CcceeeeecCCCC---------cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc
Confidence 9988777754433 299999999998 58899999999999998765322211 113456
Q ss_pred ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC---CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 162 SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL---PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 162 ~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
..|.+++|+| ++.+|++++.|+.|++||+++.+........ .....+........+..+++++.++.|++||+.++
T Consensus 246 ~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 246 GKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred CceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 6899999999 9999999999999999999876543332211 11122222222334556777788999999999987
Q ss_pred cccCCCcceeecccccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcce
Q 016032 239 NLDSPSREIVHSHDFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPV 317 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 317 (396)
+.... +..+. ....+.|+|+ |++++ +|+.||.|++||+.+++.+......... .
T Consensus 325 ~~~~~---------~~~~~~~v~~~~~s~~---------~~~l~---s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~-- 379 (408)
T 4a11_B 325 EQITM---------LKGHYKTVDCCVFQSN---------FQELY---SGSRDCNILAWVPSLYEPVPDDDETTTK--S-- 379 (408)
T ss_dssp CEEEE---------ECCCSSCEEEEEEETT---------TTEEE---EEETTSCEEEEEECC------------------
T ss_pred cceee---------eccCCCeEEEEEEcCC---------CCEEE---EECCCCeEEEEeCCCCCccCCCCceEec--c--
Confidence 75421 12222 2347889998 77777 7899999999999999887665433211 1
Q ss_pred eeeccCC-cEEEeec-CCcEEEEcCCC
Q 016032 318 NKLHPRD-DVLASGS-SRSIFIWRPKE 342 (396)
Q Consensus 318 ~~~~~~~-~~l~sg~-d~~i~iw~~~~ 342 (396)
.+.+.. ..+.+++ ++.+++|+...
T Consensus 380 -~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 380 -QLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ---------------------------
T ss_pred -ccccccceeecccCccCceeecCCcc
Confidence 233433 3334444 89999998653
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=238.61 Aligned_cols=221 Identities=18% Similarity=0.234 Sum_probs=179.7
Q ss_pred CccceeeeccccCCeEEEEecCC--CCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCC-CcEEEEE
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPT--NNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTN-DGTVYAA 83 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~ 83 (396)
....+..+.+|.+.|++++|+|+ + .+|++|+.||.|++||+.++. ....+ ..|...|.+++|+|+. +.+|+++
T Consensus 44 ~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~ 121 (379)
T 3jrp_A 44 THKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVA 121 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEe
Confidence 45667789999999999999977 6 689999999999999999876 44444 6799999999999974 5799999
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-------------CCCEEEEEecCCeEEEEeCCCCCC
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-------------EKGVVLVADNFGFLYLVDARTNSR 150 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~g~i~i~d~~~~~~ 150 (396)
+.|+.|++||+.++............ ..+.+++|+| ++.++++++.+|.|++||++....
T Consensus 122 ~~d~~i~v~d~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTTSPIIIDAHA-------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp ETTSEEEEEECCTTSCCCEEEEECCT-------TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred cCCCcEEEEecCCCCceeeEEecCCC-------CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 99999999999987554433322111 2399999999 699999999999999999987654
Q ss_pred Cccce-eeecCCccEEEEEeccCC---CCEEEEeeCCCcEEEEecCCCCCCC---ccccCCCCCceeEEEEcCCCCEEEE
Q 016032 151 SGEAI-LIHRKGSKVVGLHCNPIQ---PELLLSCGNDHFARIWDIRRLEAGS---SLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 151 ~~~~~-~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
..... ....|...|.+++|+| + +.+|++++.||.|++||+++..... ......|...|.+++|+|++++|++
T Consensus 195 ~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 195 TYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred ceeeEEEEecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence 33222 3445667899999999 7 8999999999999999998754221 2222258889999999999999999
Q ss_pred EeCCCcEEEEEccccc
Q 016032 224 TSQDNRLRIWDSIFGN 239 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~ 239 (396)
++.||.|++|++..+.
T Consensus 274 ~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 274 SGGDNKVTLWKENLEG 289 (379)
T ss_dssp EESSSSEEEEEEEETT
T ss_pred ecCCCcEEEEeCCCCC
Confidence 9999999999998644
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.6e-31 Score=232.55 Aligned_cols=299 Identities=12% Similarity=0.132 Sum_probs=222.8
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEE-EEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTV-YAA 83 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~ 83 (396)
|++.++..+..+.+|. .+.+++|+|++..++++++.|+.|++||+.+++....+. +...+.+++|+|+ +.+| +++
T Consensus 17 ~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~spd-g~~l~~~~ 92 (391)
T 1l0q_A 17 IDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AGSSPQGVAVSPD-GKQVYVTN 92 (391)
T ss_dssp EETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CSSSEEEEEECTT-SSEEEEEE
T ss_pred EECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CCCCccceEECCC-CCEEEEEE
Confidence 6777778888888776 489999999996556788899999999999988877764 3348999999999 7766 455
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEE-EEEecCCeEEEEeCCCCCCCccceeeecCCc
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVV-LVADNFGFLYLVDARTNSRSGEAILIHRKGS 162 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 162 (396)
+.++.|++||+.+++.+..+..+. .+.+++|+|+++.+ ++++.++.|++||+.+++.... .....
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~----~~~~~ 158 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVKTGK----------SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT----VSVGR 158 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSS----------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE----EECCS
T ss_pred CCCCEEEEEECCCCeEEEEEeCCC----------CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE----EecCC
Confidence 567999999999998877765432 27899999999977 6778899999999988654322 22234
Q ss_pred cEEEEEeccCCCCEE-EEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe---CCCcEEEEEcccc
Q 016032 163 KVVGLHCNPIQPELL-LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS---QDNRLRIWDSIFG 238 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~ 238 (396)
.+.+++|+| ++..+ ++++.++.|++||+++.+. ...+.+...+.+++|+|++++|++++ .++.|++||+.++
T Consensus 159 ~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 159 SPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSV---IDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEE---EEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeE---EEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 679999999 77766 6778899999999986543 33334567899999999999998888 6899999999887
Q ss_pred cccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCC------
Q 016032 239 NLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNIT------ 312 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~------ 312 (396)
+.... +..+..+..+.|+|+ |+++.. +++.++.|++||+.+++.+..+..+...
T Consensus 235 ~~~~~---------~~~~~~~~~~~~s~d---------g~~l~~--s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
T 1l0q_A 235 KITAR---------IPVGPDPAGIAVTPD---------GKKVYV--ALSFXNTVSVIDTATNTITATMAVGKNPYASGQF 294 (391)
T ss_dssp EEEEE---------EECCSSEEEEEECTT---------SSEEEE--EETTTTEEEEEETTTTEEEEEEECSSSEECCSSC
T ss_pred eEEEE---------EecCCCccEEEEccC---------CCEEEE--EcCCCCEEEEEECCCCcEEEEEECCcCCCcccee
Confidence 65321 111223457899998 655521 5678899999999999887766544211
Q ss_pred -------CCcceeeeccCC----------cEEEeec-CCcEEEEcCCCcce
Q 016032 313 -------TISPVNKLHPRD----------DVLASGS-SRSIFIWRPKEKSE 345 (396)
Q Consensus 313 -------~i~~~~~~~~~~----------~~l~sg~-d~~i~iw~~~~~~~ 345 (396)
....+..|+.+. ..+...+ |..+++|++.++..
T Consensus 295 ~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 295 IGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp EEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred eecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 011111343332 3455556 89999999988764
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.8e-31 Score=234.44 Aligned_cols=280 Identities=13% Similarity=0.180 Sum_probs=213.7
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEE-EEEeCCCeEEEEECCCCcccceeecCCCCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTV-YAASSDGTVSCTDLETGLALSLMNVNPNGWHG 112 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 112 (396)
.++++++.|+.|++||+.+++....+. .| ..+.+++|+|+ +.++ ++++.|+.|++||+.+++....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~-~~-~~~~~~~~s~d-g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~----- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP-VG-SNPMGAVISPD-GTKVYVANAHSNDVSIIDTATNNVIATVPAGS----- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CS-SSEEEEEECTT-SSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee-cC-CCcceEEECCC-CCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----
Confidence 578999999999999999988777763 34 45899999999 6665 677789999999999998887776543
Q ss_pred CCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEE-EEeeCCCcEEEEe
Q 016032 113 PRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELL-LSCGNDHFARIWD 190 (396)
Q Consensus 113 ~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~d~~i~~wd 190 (396)
.+.+++|+|++++++++ ..++.|++||+.+++.... ......+.+++|+| ++..+ ++++.++.|++||
T Consensus 75 -----~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~----~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 75 -----SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT----VKTGKSPLGLALSP-DGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp -----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE----EECSSSEEEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred -----CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE----EeCCCCcceEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 28999999999988655 4679999999998654322 22334689999999 88766 7888899999999
Q ss_pred cCCCCCCCccccCCCCCceeEEEEcCCCCEE-EEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCC
Q 016032 191 IRRLEAGSSLCDLPHKRVVNSAYFSPSGSKI-LTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDP 269 (396)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
+++.+... .+.....+.+++|+|++++| ++++.++.|++||+++++..... .....+..+.|+|+
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~-- 210 (391)
T 1l0q_A 145 TVTKAVIN---TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV---------KVEAAPSGIAVNPE-- 210 (391)
T ss_dssp TTTTEEEE---EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE---------ECSSEEEEEEECTT--
T ss_pred CCCCcEEE---EEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE---------ecCCCccceEECCC--
Confidence 97654433 23334567999999999887 56778899999999887653211 11223356889998
Q ss_pred CCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEE-Eeec-CCcEEEEcCCCcceee
Q 016032 270 SESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVL-ASGS-SRSIFIWRPKEKSELV 347 (396)
Q Consensus 270 ~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~sg~-d~~i~iw~~~~~~~~~ 347 (396)
|++++.......++.|++||+.+++.+..+..+. .+..+ +|+|++++| ++++ |+.|++||+.+++.+.
T Consensus 211 -------g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~-~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 211 -------GTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP--DPAGI-AVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp -------SSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS--SEEEE-EECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -------CCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC--CccEE-EEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 6555521111268999999999998888776653 35556 899999877 5667 9999999999999888
Q ss_pred eccccceE
Q 016032 348 EQKEEMKI 355 (396)
Q Consensus 348 ~~~~~~~~ 355 (396)
.+..+...
T Consensus 281 ~~~~~~~~ 288 (391)
T 1l0q_A 281 TMAVGKNP 288 (391)
T ss_dssp EEECSSSE
T ss_pred EEECCcCC
Confidence 87665443
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-33 Score=244.17 Aligned_cols=252 Identities=9% Similarity=0.062 Sum_probs=193.3
Q ss_pred cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCccc-----ceeEEEEecCCCcEEEEEeCCCeEEEE
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-----IVNNIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
+|.+.|.+++|+|+| .+||+++.||.|+|||..+ ....+ . |.. .|.+++|+|+ +++|++|+.||+|++|
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l-~-~~~~~~~~sv~svafSPD-G~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNL-D-SKGNLSSRTYHCFEWNPI-ESSIVVGNEDGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEEC-C-CSSCSTTTCEEEEEECSS-SSCEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeec-c-CCCccccccEEEEEEcCC-CCEEEEEcCCCEEEEE
Confidence 578899999999999 6899999999999999655 33333 3 554 5999999999 9999999999999999
Q ss_pred ECCCCcc-------cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceee-ecCCccE
Q 016032 93 DLETGLA-------LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILI-HRKGSKV 164 (396)
Q Consensus 93 d~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~-~~~~~~i 164 (396)
|+.++.. +..+..+.. ++. ..|.+++|+|++ +++++.|+.|++||+............ ..+...|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~---gh~--~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDA---GSK--DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCT---TCC--CCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred ECCCCccccccceeeeeeecccc---ccc--ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE
Confidence 9998753 233332222 222 349999999999 888999999999999886642111112 2444589
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEE--cCCCCEEEEEeCCCcEEEEEcccccccC
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYF--SPSGSKILTTSQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 242 (396)
.+++|+ ++.|++++ ++.|++||+...+.. ....+|...|..++| +|++..|++++.+|+ ++|..+
T Consensus 230 ~svaFs---g~~LASa~-~~tIkLWd~~~~~~~--~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d------ 296 (588)
T 2j04_A 230 TDLKIV---DYKVVLTC-PGYVHKIDLKNYSIS--SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED------ 296 (588)
T ss_dssp CCEEEE---TTEEEEEC-SSEEEEEETTTTEEE--EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS------
T ss_pred EEEEEE---CCEEEEEe-CCeEEEEECCCCeEE--EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec------
Confidence 999998 47888887 699999999754331 223379999999999 999999999999999 999986
Q ss_pred CCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeecc
Q 016032 243 PSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHP 322 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~ 322 (396)
.+.++|+ +..++ ..|+++++|+...+. +..+.+ ...|.++ +|+|
T Consensus 297 ------------------~~~~spd---------~~l~a-----~~d~~v~lW~~~g~~-l~~~~~--~~~I~~v-a~SP 340 (588)
T 2j04_A 297 ------------------ELHVTAD---------NIIAP-----YLEKKFKKWSTIWNE-FNNYET--TLVIHGI-SLSP 340 (588)
T ss_dssp ------------------SEEEECC---------CSSHH-----HHHHHHHHTTTTTTS-SSSSCC--EEEEEEE-EECT
T ss_pred ------------------cEEECCC---------ceEEE-----EcCCEEEEEECCCCc-eeeecc--ceEEEEE-EECC
Confidence 1336666 44443 349999999975443 444433 3567778 8999
Q ss_pred CCcEEEeec
Q 016032 323 RDDVLASGS 331 (396)
Q Consensus 323 ~~~~l~sg~ 331 (396)
+|+.+|+++
T Consensus 341 dG~~lA~~~ 349 (588)
T 2j04_A 341 DGYSIAIVY 349 (588)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 999999987
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.6e-31 Score=238.02 Aligned_cols=290 Identities=12% Similarity=0.076 Sum_probs=220.0
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEe----cCCcccceeEEEEecCCCcEEEEEeCCC
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVY----GNIHSCIVNNIRFNPTNDGTVYAASSDG 87 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg 87 (396)
.+..+..+ ..+.+++|+|++ .++++++.++.|++||+.+++..... ..+|...|.+++|+|+ +.++++++.|+
T Consensus 115 ~~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~ 191 (433)
T 3bws_A 115 FISRFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQAN 191 (433)
T ss_dssp EEEEEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGT
T ss_pred EEEEEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-CEEEEEECCCC
Confidence 33444444 456699999955 78899999999999999987766532 1468889999999998 89999999999
Q ss_pred eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceeeecCCccEEE
Q 016032 88 TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILIHRKGSKVVG 166 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~ 166 (396)
.|++||+.+++....+..+.. .+.+++|+|+++.++++ +.++.|++||+++++... .......+.+
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~----~~~~~~~~~~ 258 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGK---------WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR----KTDKIGLPRG 258 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSS---------SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE----ECCCCSEEEE
T ss_pred EEEEEECCCceEEEEEcCCCC---------CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE----EecCCCCceE
Confidence 999999999888777754332 28999999999988655 478999999998765432 2223346999
Q ss_pred EEeccCCCCEEEEee--------CCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEE-EEEeCCCcEEEEEccc
Q 016032 167 LHCNPIQPELLLSCG--------NDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKI-LTTSQDNRLRIWDSIF 237 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~--------~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~ 237 (396)
++|+| ++..+++++ .|+.|++||+++.+. +....+...+.+++|+|+++.+ ++++.++.|++||+.+
T Consensus 259 ~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 259 LLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKL---IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp EEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEE---EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred EEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcE---EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 99999 888888887 488999999986543 3333456688999999999755 6668899999999997
Q ss_pred ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeee------------cccccccceEEEEcCccchhhh
Q 016032 238 GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISEN------------YNGAALHPIDFIDITTGQLVAE 305 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------------~~g~~d~~i~vwd~~~~~~~~~ 305 (396)
++..... .....+..++|+|+ |++++.. ++|+.||.|++||+.+++.+..
T Consensus 335 ~~~~~~~---------~~~~~~~~~~~s~d---------g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 335 KKVQKSI---------PVFDKPNTIALSPD---------GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TEEEEEE---------ECSSSEEEEEECTT---------SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CcEEEEe---------cCCCCCCeEEEcCC---------CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 7653211 11223457899998 3333311 1345578999999999998887
Q ss_pred hcCCCCCCCcceeeeccCCcEEEee-c-CCcEEEEcCCC
Q 016032 306 VMDPNITTISPVNKLHPRDDVLASG-S-SRSIFIWRPKE 342 (396)
Q Consensus 306 ~~~~~~~~i~~~~~~~~~~~~l~sg-~-d~~i~iw~~~~ 342 (396)
+..+ ..+..+ +|+|+|++|+++ . |+.|++|++..
T Consensus 397 ~~~~--~~~~~~-~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 397 WEAG--NQPTGL-DVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EECS--SSEEEE-EECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ecCC--CCCceE-EEcCCCCEEEEEECCCCeEEEEEecC
Confidence 7653 456667 899999998875 4 89999999863
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.6e-33 Score=244.07 Aligned_cols=266 Identities=12% Similarity=0.027 Sum_probs=178.1
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeE----ecCCcccceeEEEEec--------CCCcEEEEEeCC
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIV----YGNIHSCIVNNIRFNP--------TNDGTVYAASSD 86 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~~~v~~~~~~~--------~~~~~l~s~~~d 86 (396)
|...+....+.+++ .+|++|+.|++|+|||+.++..... ...+|...|++++|+| + +++|++++.|
T Consensus 88 ~~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d-~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA-EQVIASVGDD 165 (393)
T ss_dssp ---------CCEEE-EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE-EEEEEEEETT
T ss_pred cCCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC-CCEEEEEECC
Confidence 33334444444454 6899999999999999988754332 2478999999999998 5 7899999999
Q ss_pred CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeCCCCCCCccce----------
Q 016032 87 GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDARTNSRSGEAI---------- 155 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~~~~~~~~~~~---------- 155 (396)
++|++||+.++.....+..+... +.+++|+|++ .+|++++.|+.|++||++++.......
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~---------v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSP---------GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSC---------EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred CeEEEEECCCCceeeeecCCCCC---------cEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 99999999887766655443332 8999999987 579999999999999998865432211
Q ss_pred ------------eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE
Q 016032 156 ------------LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 156 ------------~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
....+...+.++.|.+.++..|++++.|+.+++||+........+. .+...+..+.+.|+.+.+..
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS--DSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECS
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe--eecCccccEEEccccccccc
Confidence 0123445678888874499999999999999999998655433332 45566666666665433221
Q ss_pred EeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchh
Q 016032 224 TSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLV 303 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~ 303 (396)
... .....|+|... +.+++ +|+.|+.|++||+.+++.+
T Consensus 315 ~~~--------------------------------~~~~~~~~~~~-------~~~~~---sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 315 FPS--------------------------------LLGACPHPRYM-------DYFAT---AHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp SCC--------------------------------SSCCEECSSCT-------TEEEE---EETTTTEEEEEETTCTTCC
T ss_pred cCc--------------------------------ceeEEEccCCC-------CEEEE---EECCCCEEEEEECCCCcEE
Confidence 110 01233444321 44555 7899999999999999988
Q ss_pred hhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCC
Q 016032 304 AEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPK 341 (396)
Q Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~ 341 (396)
..+..++ ..|.++ +|+|+|++||+++++.+.+|++.
T Consensus 353 ~~~~~~~-~~V~sv-afspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 353 SIPIQLG-MPIVDF-CWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEEECS-SCEEEE-EECTTSSEEEEEESSEEEEEEEG
T ss_pred EEecCCC-CcEEEE-EEcCCCCEEEEEeCCCeEEEEEe
Confidence 8777776 688888 99999999999997778777754
No 112
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.5e-32 Score=232.31 Aligned_cols=223 Identities=16% Similarity=0.160 Sum_probs=169.8
Q ss_pred CCCCCc--cceeeeccccCCeEEEEecCC--CCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCC-C
Q 016032 5 HVIPDQ--VNCAVIRYHSRRVTCLEFHPT--NNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTN-D 77 (396)
Q Consensus 5 ~~~~~~--~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~ 77 (396)
|++..+ ..+..+.+|.+.|++++|+|. + .+|++|+.|++|+|||+.++. ....+ .+|...|.+++|+|+. +
T Consensus 40 wd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g 117 (316)
T 3bg1_A 40 FDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYG 117 (316)
T ss_dssp EEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTC
T ss_pred EEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCC
Confidence 444433 346789999999999999863 5 689999999999999998764 33333 6799999999999973 5
Q ss_pred cEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC-----------------CCEEEEEecCCeE
Q 016032 78 GTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE-----------------KGVVLVADNFGFL 140 (396)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~~g~i 140 (396)
.+|++++.|++|++||+..+........ ..++. ..+.+++|+|+ +.+|++|+.|+.|
T Consensus 118 ~~lasgs~D~~i~lwd~~~~~~~~~~~~----~~~h~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v 191 (316)
T 3bg1_A 118 LILACGSSDGAISLLTYTGEGQWEVKKI----NNAHT--IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLI 191 (316)
T ss_dssp SCEEEECSSSCEEEEEECSSSCEEECCB----TTSSS--SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBC
T ss_pred cEEEEEcCCCCEEEEecCCCCCcceeee----ecccc--CCcceEEEccccCCccccccccccCccccceEEEecCCCeE
Confidence 7899999999999999987632211110 01111 23888999987 4689999999999
Q ss_pred EEEeCCCCCCCccceeeecCCccEEEEEeccCCC----CEEEEeeCCCcEEEEecCCCCCCC-ccc-cCCCCCceeEEEE
Q 016032 141 YLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP----ELLLSCGNDHFARIWDIRRLEAGS-SLC-DLPHKRVVNSAYF 214 (396)
Q Consensus 141 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~~~-~~~-~~~~~~~i~~~~~ 214 (396)
++||++.............|...|.+++|+| ++ .+|++++.|++|++|++.+..... ... ...|...|.+++|
T Consensus 192 ~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~ 270 (316)
T 3bg1_A 192 KLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSW 270 (316)
T ss_dssp CEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEE
T ss_pred EEEEeCCCCccceeeecccCCCceEEEEecC-CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEE
Confidence 9999975432112223445667899999999 64 789999999999999997632111 111 1247889999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcc
Q 016032 215 SPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 215 ~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
+|++.+|++++.|+.|++|+..
T Consensus 271 sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 271 SITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCEEEEEcCCCeEEEEEEC
Confidence 9999999999999999999975
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-30 Score=220.87 Aligned_cols=258 Identities=14% Similarity=0.199 Sum_probs=202.5
Q ss_pred CCCCCccceeeec--cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEE
Q 016032 5 HVIPDQVNCAVIR--YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 5 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 82 (396)
|++.++.+++.++ +|...|++++|+|++ ++|++|+.||+|++||+.+++....+ .+|...+.++.+. +..+++
T Consensus 50 Wd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~-~~h~~~~~~~~~~---~~~l~s 124 (318)
T 4ggc_A 50 WSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNM-TSHSARVGSLSWN---SYILSS 124 (318)
T ss_dssp EETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEEE---TTEEEE
T ss_pred EECCCCCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEe-cCccceEEEeecC---CCEEEE
Confidence 7777887777664 678889999999999 68999999999999999999888777 6799888877665 569999
Q ss_pred EeCCCeEEEEECCCCcccc-eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccc-eeeecC
Q 016032 83 ASSDGTVSCTDLETGLALS-LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEA-ILIHRK 160 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~-~~~~~~ 160 (396)
++.++.+++|+........ .+..+.. .+..+.+.++++++++++.|+.|++||+++++..... .....+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 195 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAEHHVATLSGHSQ---------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH 195 (318)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSS---------CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCC
T ss_pred EecCCceEeeecCCCceeEEEEcCccC---------ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeeccc
Confidence 9999999999988765433 3332222 2889999999999999999999999999987644322 234445
Q ss_pred CccEEEEEeccCCCCEE--EEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe--CCCcEEEEEcc
Q 016032 161 GSKVVGLHCNPIQPELL--LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS--QDNRLRIWDSI 236 (396)
Q Consensus 161 ~~~i~~~~~~~~~~~~l--~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~iwd~~ 236 (396)
...+.+++++|.....+ ++++.++.|++||.+.... .....+...+..+.|+|++..+++++ .|+.|++||++
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 56899999999555554 4567789999999876433 33335777899999999999887655 79999999999
Q ss_pred cccccCCCcceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCcc
Q 016032 237 FGNLDSPSREIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTG 300 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~ 300 (396)
+++.+.. +.+|.. ...++|+|+ |++++ +|+.|++|+|||+.+.
T Consensus 273 ~~~~~~~---------l~gH~~~V~~l~~spd---------g~~l~---S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 273 TMAKVAE---------LKGHTSRVLSLTMSPD---------GATVA---SAAADETLRLWRCFEL 316 (318)
T ss_dssp TCCEEEE---------ECCCSSCEEEEEECTT---------SSCEE---EEETTTEEEEECCSCC
T ss_pred CCcEEEE---------EcCCCCCEEEEEEcCC---------CCEEE---EEecCCeEEEEECCCC
Confidence 8876432 223333 357899998 77888 8999999999998654
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-31 Score=231.70 Aligned_cols=206 Identities=12% Similarity=0.136 Sum_probs=163.7
Q ss_pred ccCCeEEEEecCCCCcEEE--EEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 19 HSRRVTCLEFHPTNNHILL--SGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
+...+.+++|+||| ++|+ +++.|++|+|||+.+......+. |...|.+++|+|+ +.+|++++. +.+.+|+..+
T Consensus 132 ~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspd-g~~l~s~s~-~~~~~~~~~~ 206 (365)
T 4h5i_A 132 ADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTD-GKVVAYITG-SSLEVISTVT 206 (365)
T ss_dssp TTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTT-SSEEEEECS-SCEEEEETTT
T ss_pred cccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccC-CceEEeccc-eeEEEEEecc
Confidence 45568999999999 5554 55579999999999998887774 8889999999999 999999885 4577777777
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC----eEEEEeCCCCCCCc-cceeeecCCccEEEEEecc
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG----FLYLVDARTNSRSG-EAILIHRKGSKVVGLHCNP 171 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g----~i~i~d~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 171 (396)
++......... +...+.+++|+|++..+++++.++ .+++|++....... .......+...|++++|+|
T Consensus 207 ~~~~~~~~~~~-------~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 207 GSCIARKTDFD-------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp CCEEEEECCCC-------TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred CcceeeeecCC-------CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 76654332211 124499999999999999998887 68889887654322 2223456667899999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
++.+||+|+.|++|+|||+++.+....+ ..+|...|++++|+|+|++||+|+.|++|+|||+...
T Consensus 280 -dg~~lasgs~D~~V~iwd~~~~~~~~~~-~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 280 -KGELAVLASNDNSIALVKLKDLSMSKIF-KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -TSCEEEEEETTSCEEEEETTTTEEEEEE-TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -CCCceEEEcCCCEEEEEECCCCcEEEEe-cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999999875543222 1269999999999999999999999999999999643
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-30 Score=227.12 Aligned_cols=274 Identities=12% Similarity=0.117 Sum_probs=199.4
Q ss_pred ecccceeeeEecCCcccceeEEEEecCC--CcEEEEEeCCCeEEEEECCC-Cccc-ceeecCCCCCCCCCcceeeeEEEe
Q 016032 49 DFYKVSEKIVYGNIHSCIVNNIRFNPTN--DGTVYAASSDGTVSCTDLET-GLAL-SLMNVNPNGWHGPRTWRMLYGMDI 124 (396)
Q Consensus 49 d~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 124 (396)
+.........+ .+|...|++++|+|+. +.+|++++.||.|++||+.+ +... ..+..+.. .|.+++|
T Consensus 25 ~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~---------~v~~~~~ 94 (368)
T 3mmy_A 25 NHNPMKDIEVT-SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTG---------PVLDVCW 94 (368)
T ss_dssp SSCTTCCEECS-SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSS---------CEEEEEE
T ss_pred CCCCcceeEec-cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccC---------CEEEEEE
Confidence 33333344433 7899999999999984 48999999999999999997 4443 34443333 3999999
Q ss_pred CCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEe--ccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc
Q 016032 125 NPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC--NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD 202 (396)
Q Consensus 125 ~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 202 (396)
+|++++|++++.||.|++||+.++... ....+...|.+++| +| ++.+|++++.|+.|++||+++.+....+
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~-- 167 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSSNQAI----QIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVL-- 167 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEE--
T ss_pred CcCCCEEEEEcCCCcEEEEEcCCCCce----eeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEE--
Confidence 999999999999999999999986543 34456678999999 88 8889999999999999999876544333
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeee
Q 016032 203 LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISE 282 (396)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 282 (396)
.....+.++.+. +..+++++.++.+.+|+++....... ............+.+.+.+... ...++
T Consensus 168 -~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~- 232 (368)
T 3mmy_A 168 -QLPERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFR----RIESPLKHQHRCVAIFKDKQNK-------PTGFA- 232 (368)
T ss_dssp -ECSSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEE----ECCCSCSSCEEEEEEEECTTSC-------EEEEE-
T ss_pred -ecCCCceEEEec--CCeeEEEeCCCcEEEEEeccccchhh----hccccccCCCceEEEcccCCCC-------CCeEE-
Confidence 234466666665 45788899999999999986542110 0000111111112222222210 12244
Q ss_pred ecccccccceEEEEcCcc---chhhhhcCCCCC-----------CCcceeeeccCCcEEEeec-CCcEEEEcCCCcceee
Q 016032 283 NYNGAALHPIDFIDITTG---QLVAEVMDPNIT-----------TISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELV 347 (396)
Q Consensus 283 ~~~g~~d~~i~vwd~~~~---~~~~~~~~~~~~-----------~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~ 347 (396)
+++.|+.|++|++... ..+..+..|... .+.++ +|+|++++|++|+ ||.|++||+.+++.+.
T Consensus 233 --~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 233 --LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGI-AFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp --EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEE-EECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred --EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEE-EEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 6899999999999887 455566665432 57777 8999999999999 9999999999999999
Q ss_pred eccccceEEE
Q 016032 348 EQKEEMKIIV 357 (396)
Q Consensus 348 ~~~~~~~~~~ 357 (396)
.+..|...+.
T Consensus 310 ~~~~~~~~v~ 319 (368)
T 3mmy_A 310 TSEQLDQPIS 319 (368)
T ss_dssp ECCCCSSCEE
T ss_pred EecCCCCCce
Confidence 9888766443
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.1e-31 Score=234.21 Aligned_cols=263 Identities=18% Similarity=0.258 Sum_probs=193.2
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
|++.+......+.+|.+.|.+++| ++ .+|++|+.||.|++||+.+++....+ .+|...|.+++|++ ..+++++
T Consensus 158 wd~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~l~~~~---~~l~s~s 230 (435)
T 1p22_A 158 WDKNTLECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGEMLNTL-IHHCEAVLHLRFNN---GMMVTCS 230 (435)
T ss_dssp EESSSCCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCCEEEEE-CCCCSCEEEEECCT---TEEEEEE
T ss_pred EeCCCCeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCcEEEEE-cCCCCcEEEEEEcC---CEEEEee
Confidence 677788888999999999999999 45 58999999999999999998887777 68999999999974 5999999
Q ss_pred CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
.||.|++||+.++......... .++. ..+.++++ +++++++|+.||.|++||++++.... ....+...+
T Consensus 231 ~dg~i~vwd~~~~~~~~~~~~~----~~~~--~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~---~~~~~~~~v 299 (435)
T 1p22_A 231 KDRSIAVWDMASPTDITLRRVL----VGHR--AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR---TLNGHKRGI 299 (435)
T ss_dssp TTSCEEEEECSSSSCCEEEEEE----CCCS--SCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE---EEECCSSCE
T ss_pred CCCcEEEEeCCCCCCceeeeEe----cCCC--CcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE---EEcCCCCcE
Confidence 9999999999988765321111 1111 23888888 78999999999999999999876543 334566689
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
.+++++ +.++++|+.||.|++||+++++....+ .+|...|.+++| ++.+|++|+.||.|++||+.++......
T Consensus 300 ~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 372 (435)
T 1p22_A 300 ACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP 372 (435)
T ss_dssp EEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC
T ss_pred EEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEE--eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccc
Confidence 999985 589999999999999999875543333 268899999999 7889999999999999999876532111
Q ss_pred cceeecccccccCC-ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhh
Q 016032 245 REIVHSHDFNRHLT-PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 245 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~ 306 (396)
........+..+.. ...+.| .+.+++ +|+.||.|++||+.+.......
T Consensus 373 ~~~~~~~~~~~h~~~v~~l~~-----------~~~~l~---s~s~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 373 AGTLCLRTLVEHSGRVFRLQF-----------DEFQIV---SSSHDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp TTTTEEEEECCCSSCCCCEEE-----------CSSCEE---ECCSSSEEEEEC----------
T ss_pred ccchheeeccCCCCCeEEEEe-----------CCCEEE---EEeCCCEEEEEECCCCCCcccC
Confidence 10001111111111 123333 366677 7999999999999877655443
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.3e-30 Score=213.94 Aligned_cols=295 Identities=14% Similarity=0.084 Sum_probs=176.8
Q ss_pred ceeeeccccCC----eEEEEecCCCC--cEEEEEeCCCcEEEeecccc---eeeeEecCCcccceeEEEEecCCCcEEEE
Q 016032 12 NCAVIRYHSRR----VTCLEFHPTNN--HILLSGDKKGQVGVWDFYKV---SEKIVYGNIHSCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 12 ~~~~~~~h~~~----v~~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 82 (396)
.+..|+...+. +.++-|-..+- -.++++++ ..|++|+.... +..... ..|..+|..+.+.|+..+++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~ 104 (356)
T 2w18_A 27 LVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTW-HFAEVPVLQIVPVPDVYNLVCV 104 (356)
T ss_dssp EEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEE-ECCSSCEEEECCCTTCCSCEEE
T ss_pred eeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEE-eccCceeEEEEEcCcccceeee
Confidence 34455555443 55666644431 14666665 68999999987 566665 6799999999999975555444
Q ss_pred EeCCCeE-EEEECC--CC-cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe--cCCeEEEEeCCCCCCCcccee
Q 016032 83 ASSDGTV-SCTDLE--TG-LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD--NFGFLYLVDARTNSRSGEAIL 156 (396)
Q Consensus 83 ~~~dg~v-~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~i~d~~~~~~~~~~~~ 156 (396)
+-..=.+ .++-+. .. +........ .+ +...+..+ ++++.+.++. .++.|++|++...........
T Consensus 105 ~~~~~~~~~v~sla~spd~~~~~~~l~s----~g--~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~ 175 (356)
T 2w18_A 105 ALGNLEIREIRALFCSSDDESEKQVLLK----SG--NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF 175 (356)
T ss_dssp EECSSSEEEEEEECC------CCEEEEE----EE--EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE
T ss_pred eeccccccceEEEEECCCccccccEEEe----CC--CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeec
Confidence 4322111 111111 00 000000000 00 00113332 4455444433 488999999955332222223
Q ss_pred eecCCccEEEEEecc--CCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEE------------
Q 016032 157 IHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKI------------ 221 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l------------ 221 (396)
.+.. .+..++|+| .++..|++++.|++|+|||+++++....+... .+...+.+++|+|+|.++
T Consensus 176 ~~~~--~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 176 LMPP--EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp ECCC--SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------
T ss_pred cCCC--ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCccee
Confidence 4444 455555555 46789999999999999999886654444321 123467888999999886
Q ss_pred EEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCce---eeEeeeeeeecccccccceEEEEcC
Q 016032 222 LTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESL---AVIGRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 222 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
++|+.|++|++||..+++.+... ...+ |+.....+ ...+.+++ +|+.|++|+|||+.
T Consensus 254 aSGs~D~tIklWd~~tgk~l~v~----------------~~~~-p~Gh~~~~lsg~~sg~~lA---SgS~DgTIkIWDl~ 313 (356)
T 2w18_A 254 SLRSPVFQLIVINPKTTLSVGVM----------------LYCL-PPGQAGRFLEGDVKDHCAA---AILTSGTIAIWDLL 313 (356)
T ss_dssp ----CCEEEEEEETTTTEEEEEE----------------EECC-CTTCCCCEEEEEEETTEEE---EEETTSCEEEEETT
T ss_pred eccCCCcEEEEEECCCCEEEEEE----------------Eeec-cCCCcceeEccccCCCEEE---EEcCCCcEEEEECC
Confidence 56788999999999988764210 0111 22111111 11133456 78899999999999
Q ss_pred ccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcC
Q 016032 299 TGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRP 340 (396)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~ 340 (396)
+++++.++.+|....+..+ +|+|+|++|++|+ |++|+|||+
T Consensus 314 tGk~l~tL~gH~~~vvs~v-afSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFV-KWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEE-EECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEE-EECCCCCEEEEEECCCcEEEecC
Confidence 9999999988874444446 8999999999999 999999985
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=247.28 Aligned_cols=222 Identities=18% Similarity=0.232 Sum_probs=180.2
Q ss_pred CccceeeeccccCCeEEEEecCC--CCcEEEEEeCCCcEEEeecccce--eeeEecCCcccceeEEEEecCC-CcEEEEE
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPT--NNHILLSGDKKGQVGVWDFYKVS--EKIVYGNIHSCIVNNIRFNPTN-DGTVYAA 83 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~ 83 (396)
.......+.+|.++|++++|+|+ + .+|++|+.||.|++||+.++. ..... .+|...|.+++|+|+. +..++++
T Consensus 42 ~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 42 THKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEE
T ss_pred CCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEE
Confidence 45667789999999999999988 6 689999999999999999875 33444 6799999999999974 6799999
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-------------CCCEEEEEecCCeEEEEeCCCCCC
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-------------EKGVVLVADNFGFLYLVDARTNSR 150 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~~g~i~i~d~~~~~~ 150 (396)
+.||.|++||+.++........... ...+.+++|+| ++..+++|+.||.|++||++.+..
T Consensus 120 s~dg~I~vwdl~~~~~~~~~~~~~~-------~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTTSPIIIDAH-------AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp ETTSEEEEEECCSSSCCCCEEEECC-------SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT
T ss_pred eCCCcEEEEEeecCCCcceeEeecC-------CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc
Confidence 9999999999998754433322111 12399999999 589999999999999999988654
Q ss_pred Cccc-eeeecCCccEEEEEeccCC---CCEEEEeeCCCcEEEEecCCCCCC---CccccCCCCCceeEEEEcCCCCEEEE
Q 016032 151 SGEA-ILIHRKGSKVVGLHCNPIQ---PELLLSCGNDHFARIWDIRRLEAG---SSLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 151 ~~~~-~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
.... .....|...|.+++|+| + +.+|++++.||.|++||+++.+.. .......|...|++++|+|++.+|++
T Consensus 193 ~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 193 TYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred cceeeeeecCCCCcEEEEEecc-CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEE
Confidence 3222 23445667899999999 7 899999999999999999875422 12222358889999999999999999
Q ss_pred EeCCCcEEEEEcccccc
Q 016032 224 TSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~~ 240 (396)
++.||.|++|++.++..
T Consensus 272 ~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 272 SGGDNKVTLWKENLEGK 288 (753)
T ss_dssp ECSSSCEECCBCCSSSC
T ss_pred EcCCCEEEEEecCCCCC
Confidence 99999999999986543
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=227.12 Aligned_cols=265 Identities=10% Similarity=0.004 Sum_probs=196.2
Q ss_pred ccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc---ccceeecCCCC-------------------------------
Q 016032 64 SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL---ALSLMNVNPNG------------------------------- 109 (396)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~------------------------------- 109 (396)
..++.+++|+|+ +.+|+++ .++.|++||+.+++ .+..+..+...
T Consensus 4 ~~p~~~v~~s~d-g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRD-GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSS-SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCC-CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 357899999999 7766655 47899999999998 55554422110
Q ss_pred --------------CCCCCcceeeeEEEeCCCCCEE-EEEecCCeEEEEeCC--CCCCCccceeeecCCccEEEEEeccC
Q 016032 110 --------------WHGPRTWRMLYGMDINPEKGVV-LVADNFGFLYLVDAR--TNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 110 --------------~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~i~d~~--~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
...+.+...|.+++|+|++++| ++++.||.|++||+. .+.... .+..+.+...+.+++|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~sp- 159 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK-LRKRFCFSKRPNAISIAE- 159 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE-EEEEEECSSCEEEEEECT-
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee-eeecccCCCCceEEEEcC-
Confidence 0000112259999999999996 889999999999998 554433 233345566899999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCC-ccccC-CCCCceeEEEEcCC---CCEEEEEeCCCcEEEEEcccccccCCCcce
Q 016032 173 QPELLLSCGNDHFARIWDIRRLEAGS-SLCDL-PHKRVVNSAYFSPS---GSKILTTSQDNRLRIWDSIFGNLDSPSREI 247 (396)
Q Consensus 173 ~~~~l~~~~~d~~i~~wd~~~~~~~~-~~~~~-~~~~~i~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 247 (396)
++.+|++++.++.|++|++.+..... ....+ +|...|.+++|+|+ +++|++++.|+.|++||+.+++.....
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--- 236 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW--- 236 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE---
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee---
Confidence 99999999999999999998765443 22222 68899999999999 999999999999999999887653210
Q ss_pred eeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC-----------------
Q 016032 248 VHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP----------------- 309 (396)
Q Consensus 248 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~----------------- 309 (396)
..++ .....+.|+ + |++++ +|+.|+.|++||+.+++++..+..+
T Consensus 237 -----~~~h~~~v~~~~~s-d---------~~~l~---s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 237 -----LFGHKHFVSSICCG-K---------DYLLL---SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRF 298 (450)
T ss_dssp -----CCCCSSCEEEEEEC-S---------TTEEE---EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----
T ss_pred -----ecCCCCceEEEEEC-C---------CCEEE---EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccc
Confidence 1112 223467787 5 77777 7889999999999999877665422
Q ss_pred -------CCCCCcceeeeccCCcEEEeec--CCcEEEEcC--CCc---ceeeeccccce
Q 016032 310 -------NITTISPVNKLHPRDDVLASGS--SRSIFIWRP--KEK---SELVEQKEEMK 354 (396)
Q Consensus 310 -------~~~~i~~~~~~~~~~~~l~sg~--d~~i~iw~~--~~~---~~~~~~~~~~~ 354 (396)
....+..+ +|+|++++|++++ |+.|+||++ .++ +.+..+..+..
T Consensus 299 ~~~~~~~~~~~v~~i-~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~ 356 (450)
T 2vdu_B 299 QNENNDIIEFAVSKI-IKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYN 356 (450)
T ss_dssp ------CBCCCEEEE-EECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSC
T ss_pred cccccccceEEEEEE-EEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCc
Confidence 12345566 8999999998875 899999999 555 55666666543
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.3e-29 Score=224.97 Aligned_cols=218 Identities=16% Similarity=0.270 Sum_probs=175.5
Q ss_pred ccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee-------eeEecCCcccceeEEEEecCCCcEEEE
Q 016032 10 QVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE-------KIVYGNIHSCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 10 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~s 82 (396)
...+..+.+|...|++++|+|++..+|++|+.||.|++|++..... ...+ .+|...|.+++|+|+++.+|++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s 249 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGS 249 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEE
Confidence 4567788999999999999999855899999999999999987322 2223 5799999999999955889999
Q ss_pred EeCCCeEEEEECCCC---cccceeecCCCCCCCCCcceeeeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCccceeee
Q 016032 83 ASSDGTVSCTDLETG---LALSLMNVNPNGWHGPRTWRMLYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAILIH 158 (396)
Q Consensus 83 ~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~~~~ 158 (396)
++.||.|++||++++ .....+..+. ..+.+++|+|++. ++++|+.+|.|++||++....... ...
T Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~--~~~ 318 (430)
T 2xyi_A 250 VADDQKLMIWDTRNNNTSKPSHTVDAHT---------AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH--SFE 318 (430)
T ss_dssp EETTSEEEEEETTCSCSSSCSEEEECCS---------SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE--EEE
T ss_pred EeCCCeEEEEECCCCCCCcceeEeecCC---------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE--Eee
Confidence 999999999999987 3444443332 2399999999987 688999999999999998543322 334
Q ss_pred cCCccEEEEEeccCCC-CEEEEeeCCCcEEEEecCCCCC-----------CCccccC-CCCCceeEEEEcCCCC-EEEEE
Q 016032 159 RKGSKVVGLHCNPIQP-ELLLSCGNDHFARIWDIRRLEA-----------GSSLCDL-PHKRVVNSAYFSPSGS-KILTT 224 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~-----------~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~ 224 (396)
.+...|.+++|+| ++ .+|++++.|+.|++||++.... ...+... +|...|.+++|+|++. +|+++
T Consensus 319 ~h~~~v~~i~~sp-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 319 SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397 (430)
T ss_dssp CCSSCEEEEEECS-SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE
T ss_pred cCCCCEEEEEECC-CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE
Confidence 4566899999999 55 6799999999999999986322 1222222 6888999999999998 89999
Q ss_pred eCCCcEEEEEcccccc
Q 016032 225 SQDNRLRIWDSIFGNL 240 (396)
Q Consensus 225 ~~d~~i~iwd~~~~~~ 240 (396)
+.||.|++|++.....
T Consensus 398 s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 398 SEDNIMQVWQMAENVY 413 (430)
T ss_dssp ETTSEEEEEEECHHHH
T ss_pred ECCCCEEEeEcccccc
Confidence 9999999999976543
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=8.1e-30 Score=220.13 Aligned_cols=226 Identities=14% Similarity=0.187 Sum_probs=177.8
Q ss_pred cceeeeccccCCeEEEEecC--CCCcEEEEEeCCCcEEEeecccce---------eeeEecCCcccceeEEEEecCC-Cc
Q 016032 11 VNCAVIRYHSRRVTCLEFHP--TNNHILLSGDKKGQVGVWDFYKVS---------EKIVYGNIHSCIVNNIRFNPTN-DG 78 (396)
Q Consensus 11 ~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~ 78 (396)
.....+.+|...|++++|+| ++ .+|++|+.||.|++||+.++. ....+ ..|...|.+++|+|+. +.
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 125 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGL 125 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGGGCS
T ss_pred eecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCCCCc
Confidence 45677889999999999999 46 689999999999999998763 33444 6799999999999974 57
Q ss_pred EEEEEeCCCeEEEEECCCCcccceeecCC----CCCCCCCcceeeeEEEeCCC---CCEEEEEecCCeEEEEeCCCCCCC
Q 016032 79 TVYAASSDGTVSCTDLETGLALSLMNVNP----NGWHGPRTWRMLYGMDINPE---KGVVLVADNFGFLYLVDARTNSRS 151 (396)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~g~i~i~d~~~~~~~ 151 (396)
+|++++.||.|++||+.+++.+..+.... .......+...+.+++|+|+ +..+++++.++.+.+|+...+...
T Consensus 126 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 205 (351)
T 3f3f_A 126 KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLH 205 (351)
T ss_dssp EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEE
T ss_pred EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCcee
Confidence 89999999999999999988766544211 11111122344899999997 999999999999988887765431
Q ss_pred ccceeeecCCccEEEEEeccCCC----CEEEEeeCCCcEEEEecCCCCCC------------------------------
Q 016032 152 GEAILIHRKGSKVVGLHCNPIQP----ELLLSCGNDHFARIWDIRRLEAG------------------------------ 197 (396)
Q Consensus 152 ~~~~~~~~~~~~i~~~~~~~~~~----~~l~~~~~d~~i~~wd~~~~~~~------------------------------ 197 (396)
.......|...|.+++|+| ++ .+|++++.||.|++||++.....
T Consensus 206 -~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
T 3f3f_A 206 -VAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSN 283 (351)
T ss_dssp -EEEECCCCCSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred -eeeecCCCCcceeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccc
Confidence 2223445667899999999 76 79999999999999999763210
Q ss_pred -------------CccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 198 -------------SSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 198 -------------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
..+..+ +|...|++++|+|++++|++++.||.|++|++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 284 TEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp -------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred cceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 122222 5888999999999999999999999999999987764
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.2e-30 Score=219.61 Aligned_cols=217 Identities=10% Similarity=0.023 Sum_probs=166.2
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc---------ceeeeEecCCcccceeEEEEec-
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK---------VSEKIVYGNIHSCIVNNIRFNP- 74 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~v~~~~~~~- 74 (396)
|++.++..+..+. ...|.++.|+|+ +++++.|++|++|+... .........+|...|.+++|+|
T Consensus 63 wd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 136 (343)
T 3lrv_A 63 TQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNE 136 (343)
T ss_dssp EEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC-
T ss_pred EECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCC
Confidence 5555565555555 567888899886 89999999999997763 3334444456778999999999
Q ss_pred -CCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc
Q 016032 75 -TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE 153 (396)
Q Consensus 75 -~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~ 153 (396)
+ +.+|++++.||+|++||+++++.......... ..+.+++|+|++.+|++|+.||.|++||++++.....
T Consensus 137 ~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~--------~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 137 VN-TEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD--------VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASS 207 (343)
T ss_dssp ---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS--------CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCE
T ss_pred CC-CCEEEEEeCCCcEEEEECCCCcEEEEEecCCC--------CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCcc
Confidence 8 89999999999999999999887554432211 2389999999999999999999999999999876522
Q ss_pred ceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCce--eEEEEcCCCCEEEEEeC-CCc
Q 016032 154 AILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVV--NSAYFSPSGSKILTTSQ-DNR 229 (396)
Q Consensus 154 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i--~~~~~~~~~~~l~~~~~-d~~ 229 (396)
.... .|..+|.+++|+| ++.+|++++ ++.|++||+++.+....+..+ .|...+ .+++|+|++++|++++. |+.
T Consensus 208 ~~~~-~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 208 RFPV-DEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS 284 (343)
T ss_dssp ECCC-CTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE
T ss_pred EEec-cCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc
Confidence 2222 2567999999999 999999999 459999999986654444322 133334 36999999999999998 999
Q ss_pred EEEEEccccc
Q 016032 230 LRIWDSIFGN 239 (396)
Q Consensus 230 i~iwd~~~~~ 239 (396)
|++|++....
T Consensus 285 i~v~~~~~~~ 294 (343)
T 3lrv_A 285 LTIYKFDKKT 294 (343)
T ss_dssp EEEEEECTTT
T ss_pred EEEEEEcccc
Confidence 9999996543
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.1e-27 Score=217.20 Aligned_cols=287 Identities=14% Similarity=0.120 Sum_probs=213.3
Q ss_pred EecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC--CCCcccceee
Q 016032 27 EFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL--ETGLALSLMN 104 (396)
Q Consensus 27 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~~ 104 (396)
+|+|++ +++++++.|++|.+||..+++....+..++. +..++|+|+ +++|++++.|++|.+||+ .+++.+..+.
T Consensus 144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPN-LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGG-EEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCC-EEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 488988 7899999999999999999888877754444 889999999 999999999999999999 7887777665
Q ss_pred cCCCCCCCCCcceeeeEEEeCC----CCCEEEEEec-CCeEEEEeCCCCCCCccceeee--------cCCccEEEEEecc
Q 016032 105 VNPNGWHGPRTWRMLYGMDINP----EKGVVLVADN-FGFLYLVDARTNSRSGEAILIH--------RKGSKVVGLHCNP 171 (396)
Q Consensus 105 ~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-~g~i~i~d~~~~~~~~~~~~~~--------~~~~~i~~~~~~~ 171 (396)
.. ..+..++|+| +++++++++. ++.|.+||..+.+....+.... .....+.++.++|
T Consensus 220 ~g----------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 220 IG----------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp CC----------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred cC----------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 32 1278999999 9999999874 8999999998876554322110 1123688999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccccCCCcceeec
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLDSPSREIVHS 250 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~ 250 (396)
..+.++++...++.|.+||+.+.+... +..+.+...+..++|+|+|++|++++ .+++|.+||+.++++......
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~---- 364 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV---- 364 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSCE-EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC----
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcce-eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc----
Confidence 555677788889999999997654332 12234556688899999999876554 588999999999886432210
Q ss_pred ccccccCCceeEEeCCCCCCCceeeEeeeeeeecccc-cccceEEEEcCc-------cchhhhhcCCCCCCCcceeeecc
Q 016032 251 HDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGA-ALHPIDFIDITT-------GQLVAEVMDPNITTISPVNKLHP 322 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~d~~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~~~~ 322 (396)
.. ..+.......++|+. |.+++ ++. .+++|.|||+.+ +++++++..+. .....+ ++||
T Consensus 365 g~-~ph~g~g~~~~~p~~--------g~~~~---s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-~~~~~v-~~~p 430 (543)
T 1nir_A 365 GK-TPHPGRGANFVHPKY--------GPVWS---TSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFI-KTHP 430 (543)
T ss_dssp SS-SBCCTTCEEEEETTT--------EEEEE---EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCE-ECCT
T ss_pred CC-CCCCCCCcccCCCCC--------ccEEE---eccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-CCceEE-EcCC
Confidence 00 001100011134442 55444 443 678999999988 78888888776 455566 8999
Q ss_pred CCcEEEeec--------CCcEEEEcCCCccee
Q 016032 323 RDDVLASGS--------SRSIFIWRPKEKSEL 346 (396)
Q Consensus 323 ~~~~l~sg~--------d~~i~iw~~~~~~~~ 346 (396)
++++|++++ +++|.|||+.+++..
T Consensus 431 dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 431 KSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 999999976 579999999999876
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.9e-27 Score=205.57 Aligned_cols=249 Identities=11% Similarity=0.152 Sum_probs=178.9
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC-cc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG-LA 99 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~ 99 (396)
..+..+++.++++.++++|+.|+.|+|||..+++....+. |...|.+++|+++ .++++. ++.|++||+.++ +.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~---~~~~~~-~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSRE---FIVVSY-GDVISVFKFGNPWKR 132 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSS---EEEEEE-TTEEEEEESSTTCCB
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCC---EEEEEE-cCEEEEEECCCCcee
Confidence 4588889988885555778889999999999988887774 7789999999875 344444 789999999988 66
Q ss_pred cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEE--EecCCeEEEEeCCCCCCC------------cc-ceeeecCCccE
Q 016032 100 LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV--ADNFGFLYLVDARTNSRS------------GE-AILIHRKGSKV 164 (396)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~g~i~i~d~~~~~~~------------~~-~~~~~~~~~~i 164 (396)
+..+.. ....+++++ .++++ |+.+|.|++||+.++... .. ......|...|
T Consensus 133 ~~~~~~------------~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v 198 (355)
T 3vu4_A 133 ITDDIR------------FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI 198 (355)
T ss_dssp SSCCEE------------EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCE
T ss_pred eEEecc------------CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce
Confidence 555433 133455566 66666 588999999999875411 00 23455677799
Q ss_pred EEEEeccCCCCEEEEeeCCCc-EEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCC
Q 016032 165 VGLHCNPIQPELLLSCGNDHF-ARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSP 243 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 243 (396)
.+++|+| ++.+|++|+.|++ |++||+++.+....+..-.|...|.+++|+|++++|++++.|+.|++||++.+.....
T Consensus 199 ~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~ 277 (355)
T 3vu4_A 199 KMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKR 277 (355)
T ss_dssp EEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCS
T ss_pred EEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccc
Confidence 9999999 9999999999998 9999998765543332112889999999999999999999999999999987643211
Q ss_pred C--cceeeccc-----------cc--ccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 244 S--REIVHSHD-----------FN--RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 244 ~--~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
. ........ +. .......++|+++ |.+++ .++.||.+++|++..++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d---------~~~l~---~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 278 HALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE---------SSLVV---VWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS---------SEEEE---EETTTTEEEEEEEEEETT
T ss_pred ccccceeeccccccccceeEEEeccCCCCCceEEEEeCC---------CCEEE---EEeCCCeEEEEEEEcCCC
Confidence 0 00000000 00 0011134678877 77777 688899999999876553
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.3e-27 Score=210.72 Aligned_cols=299 Identities=8% Similarity=0.015 Sum_probs=209.8
Q ss_pred ccCCeEEEEecCCCCcEEEEEe----CCC----cEEEeec--ccceeeeE-ecCCcccceeEEEEecCC-----------
Q 016032 19 HSRRVTCLEFHPTNNHILLSGD----KKG----QVGVWDF--YKVSEKIV-YGNIHSCIVNNIRFNPTN----------- 76 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~----~dg----~i~iwd~--~~~~~~~~-~~~~~~~~v~~~~~~~~~----------- 76 (396)
+...|...+|.+.|..++++|+ .+| .|+|||+ .+++.+.. ...+|...+..+++.+..
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 3457888899999978888886 467 8999999 77765522 225688888887776410
Q ss_pred --CcEEEEEeCC------CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC---eEEEEeC
Q 016032 77 --DGTVYAASSD------GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG---FLYLVDA 145 (396)
Q Consensus 77 --~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g---~i~i~d~ 145 (396)
+..++.++.+ +.|++||+..+ ....+..+.. .+.+++|+|+++.|++++.++ .|++||+
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~---------~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQ---------PLMSPAWSPDGSKLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESS---------CEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCC---------cceeeEEcCCCCEEEEEEecCCCcEEEEEEC
Confidence 3455555443 79999999854 3444433322 289999999999999998875 9999999
Q ss_pred CCCCCCccceeeecCCccEEEEEeccCCCCEEE-EeeCCCc--EEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEE
Q 016032 146 RTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL-SCGNDHF--ARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKIL 222 (396)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 222 (396)
.+++.. ....+...+.+++|+| ++..|+ +++.++. |++||+.+.+. .....+...+.+++|+|+|++|+
T Consensus 211 ~tg~~~----~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 211 ANGAVR----QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp TTCCEE----EEECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEE
T ss_pred CCCcEE----EeecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCCCCEEE
Confidence 986542 2334455799999999 888777 6666654 99999976443 22335778899999999999998
Q ss_pred EEeC-CC--cEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc
Q 016032 223 TTSQ-DN--RLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT 299 (396)
Q Consensus 223 ~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~ 299 (396)
+++. ++ .|.+||+.+++.... ... ......+.|+|+ |++++.......+..|++||+.+
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~~~l--------~~~-~~~~~~~~~spd---------G~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAPQRI--------TWE-GSQNQDADVSSD---------GKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCCEEC--------CCS-SSEEEEEEECTT---------SSEEEEEEECSSCEEEEEEETTT
T ss_pred EEECCCCCcEEEEEECCCCCEEEE--------ecC-CCcccCeEECCC---------CCEEEEEECcCCceEEEEEECCC
Confidence 8876 44 677779887653210 000 112246899998 66666221112246899999998
Q ss_pred cchhhhhcCCCCCCCcceeeeccCCcEEEeec-CC---cEEEEcCCCcceeeeccccceEEEe
Q 016032 300 GQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SR---SIFIWRPKEKSELVEQKEEMKIIVC 358 (396)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~---~i~iw~~~~~~~~~~~~~~~~~~~~ 358 (396)
++.. .+..+. .+..+ +|+|+|++|++++ ++ .|++|++. +.....+..+...+.+
T Consensus 345 ~~~~-~l~~~~--~~~~~-~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~ 402 (415)
T 2hqs_A 345 GGVQ-VLSSTF--LDETP-SLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKF 402 (415)
T ss_dssp CCEE-ECCCSS--SCEEE-EECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEE
T ss_pred CCEE-EecCCC--CcCCe-EEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcC
Confidence 8764 344432 56666 8999999999887 65 79999987 4456667776555444
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=8.3e-28 Score=214.03 Aligned_cols=253 Identities=13% Similarity=0.119 Sum_probs=195.1
Q ss_pred CCCCCcccee-----eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcE
Q 016032 5 HVIPDQVNCA-----VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79 (396)
Q Consensus 5 ~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 79 (396)
|++.++.... .+.+|.+.|.+++|+|++ +++++++.|+.|++||+.++.....+ ..|...+.+++|+|+ +..
T Consensus 149 ~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 225 (433)
T 3bws_A 149 LDINSGQTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPI-RDL 225 (433)
T ss_dssp EETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETT-TTE
T ss_pred EECCCCeEeeecCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCC-CCE
Confidence 4555555554 566899999999999998 78999999999999999988777666 468899999999999 666
Q ss_pred E-EEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe--------cCCeEEEEeCCCCCC
Q 016032 80 V-YAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD--------NFGFLYLVDARTNSR 150 (396)
Q Consensus 80 l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~g~i~i~d~~~~~~ 150 (396)
+ ++++.++.|++||+.+++....+... ..+.+++|+|+++.+++++ .++.|++||+.+++.
T Consensus 226 l~~~~~~~~~i~~~d~~~~~~~~~~~~~----------~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 226 VYCSNWISEDISVIDRKTKLEIRKTDKI----------GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECCCC----------SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEEEecCCCcEEEEECCCCcEEEEecCC----------CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 6 55558999999999988876655432 2288999999999999987 488999999988654
Q ss_pred CccceeeecCCccEEEEEeccCCCC-EEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeC---
Q 016032 151 SGEAILIHRKGSKVVGLHCNPIQPE-LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ--- 226 (396)
Q Consensus 151 ~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--- 226 (396)
... ..+...+.+++|+| ++. ++++++.++.|++||+.+.+. +..+.+...+.+++|+|++++|++++.
T Consensus 296 ~~~----~~~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 296 IDT----IGPPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKV---QKSIPVFDKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp EEE----EEEEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEE---EEEEECSSSEEEEEECTTSSEEEEEECCCC
T ss_pred Eee----ccCCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcE---EEEecCCCCCCeEEEcCCCCEEEEEecCCC
Confidence 322 22233688999999 775 567778999999999986443 333346678999999999999988876
Q ss_pred ------------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEE
Q 016032 227 ------------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDF 294 (396)
Q Consensus 227 ------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~v 294 (396)
||.|++||+.+++..... .....+..+.|+|+ |++++. ++..++.|++
T Consensus 368 ~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~---------~~~~~~~~~~~s~d---------g~~l~~--~~~~d~~i~v 427 (433)
T 3bws_A 368 HPTEGYLKKGLVLGKVYVIDTTTDTVKEFW---------EAGNQPTGLDVSPD---------NRYLVI--SDFLDHQIRV 427 (433)
T ss_dssp CTTTCTTSCCSSCCEEEEEETTTTEEEEEE---------ECSSSEEEEEECTT---------SCEEEE--EETTTTEEEE
T ss_pred ccccccccccccceEEEEEECCCCcEEEEe---------cCCCCCceEEEcCC---------CCEEEE--EECCCCeEEE
Confidence 579999999887754311 11223457899998 666651 2345999999
Q ss_pred EEcC
Q 016032 295 IDIT 298 (396)
Q Consensus 295 wd~~ 298 (396)
|++.
T Consensus 428 ~~~~ 431 (433)
T 3bws_A 428 YRRD 431 (433)
T ss_dssp EEET
T ss_pred EEec
Confidence 9985
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.7e-28 Score=202.77 Aligned_cols=201 Identities=13% Similarity=0.119 Sum_probs=138.5
Q ss_pred CCeEEEEecCC----CCcEEEEEeC--------------------CCcEEEeeccc-ceeeeEecCCcccceeEEEEec-
Q 016032 21 RRVTCLEFHPT----NNHILLSGDK--------------------KGQVGVWDFYK-VSEKIVYGNIHSCIVNNIRFNP- 74 (396)
Q Consensus 21 ~~v~~~~~~~~----~~~~l~s~~~--------------------dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~- 74 (396)
..|.+++|+|+ + +++++++. |+.|++|++.. ++..... .+|...+..++|+|
T Consensus 112 ~~v~sla~spd~~~~~-~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~-~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 112 REIRALFCSSDDESEK-QVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ-FLMPPEETILTFAEV 189 (356)
T ss_dssp EEEEEECC------CC-EEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEE-EECCCSSCEEEEEEE
T ss_pred cceEEEEECCCccccc-cEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeee-ccCCCceeeEEeecc
Confidence 35667777777 6 46666553 77777888744 4444433 46777788888887
Q ss_pred --CCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEE------------EEEecCCeE
Q 016032 75 --TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVV------------LVADNFGFL 140 (396)
Q Consensus 75 --~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~~g~i 140 (396)
+ +..|++++.|++|++||+.+++.+..+..+... ...+.+++|+|++.++ ++|+.|++|
T Consensus 190 ~g~-~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~------v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 190 QGM-QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY------QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp ETS-TTEEEEEETTSEEEEEETTTCCEEEEEECCC---------CCCEEEEEEETTEEEEEEC------------CCEEE
T ss_pred CCC-CceEEEecCCCcEEEEECCCCcEEEEEcCCCcc------eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE
Confidence 4 688999999999999999999999888643221 1237788999999876 557788999
Q ss_pred EEEeCCCCCCCcccee--eecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCcee-EEEEcCC
Q 016032 141 YLVDARTNSRSGEAIL--IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVN-SAYFSPS 217 (396)
Q Consensus 141 ~i~d~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~-~~~~~~~ 217 (396)
++||..++........ ...+...+.+..+ .+.++++++.|++|+|||+.+++....+. +|...+. +++|+|+
T Consensus 263 klWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPD 337 (356)
T 2w18_A 263 IVINPKTTLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGT 337 (356)
T ss_dssp EEEETTTTEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSS
T ss_pred EEEECCCCEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCC
Confidence 9999988765432111 1123223333333 36789999999999999998755433332 4666554 6899999
Q ss_pred CCEEEEEeCCCcEEEEEc
Q 016032 218 GSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 218 ~~~l~~~~~d~~i~iwd~ 235 (396)
|++|++|+.|++|+|||+
T Consensus 338 G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 338 DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCCcEEEecC
Confidence 999999999999999996
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.1e-26 Score=210.89 Aligned_cols=327 Identities=10% Similarity=0.023 Sum_probs=223.7
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeec--ccceeeeEecCCcccceeEEEEec----CCCc
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDF--YKVSEKIVYGNIHSCIVNNIRFNP----TNDG 78 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 78 (396)
|+..++.++..+..+.. +.+++|+|+| ++|++++.|+.|.+||+ .+.+....+. +...+..++|+| + ++
T Consensus 164 ~D~~t~~~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~d-g~ 238 (543)
T 1nir_A 164 VDGDSKKIVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYE-DR 238 (543)
T ss_dssp EETTTCCEEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCT-TT
T ss_pred EECCCceEEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCC-CC
Confidence 56667777788874333 8999999999 68999999999999999 7777776664 566789999999 9 88
Q ss_pred EEEEEeC-CCeEEEEECCCCcccceeecCCCCCCC--CCcceeeeEEEeCCCCCE-EEEEecCCeEEEEeCCCCCCCccc
Q 016032 79 TVYAASS-DGTVSCTDLETGLALSLMNVNPNGWHG--PRTWRMLYGMDINPEKGV-VLVADNFGFLYLVDARTNSRSGEA 154 (396)
Q Consensus 79 ~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-l~~~~~~g~i~i~d~~~~~~~~~~ 154 (396)
++++++. +++|.+||..+++.+..+......... ......+.++.++|++.. +++...++.|.+||..+......
T Consensus 239 ~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~- 317 (543)
T 1nir_A 239 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV- 317 (543)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE-
T ss_pred EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee-
Confidence 8888874 899999999999988877653211000 000113888999997665 45567789999999988654431
Q ss_pred eeeecCCccEEEEEeccCCCCEEEE-eeCCCcEEEEecCCCCCCCccccC--CCCCceeEEEEcCC-CCEEEEEe-CCCc
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLS-CGNDHFARIWDIRRLEAGSSLCDL--PHKRVVNSAYFSPS-GSKILTTS-QDNR 229 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~-~d~~ 229 (396)
.....+..+..+.|+| ++++|++ +..+++|.+||+.+++....+... .|.+....+ ++|+ +.+++++. .|++
T Consensus 318 -~~i~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 318 -TSIGAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp -EEEECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred -EEeccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence 1112344678899999 8886655 456899999999876654444321 244433333 5776 66666665 5899
Q ss_pred EEEEEcccccccCCCcceeeccccccc-CCceeEEeCCCCCCCceeeEeeeeeeecccc----cccceEEEEcCccchhh
Q 016032 230 LRIWDSIFGNLDSPSREIVHSHDFNRH-LTPFRAEWDPKDPSESLAVIGRYISENYNGA----ALHPIDFIDITTGQLVA 304 (396)
Q Consensus 230 i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~----~d~~i~vwd~~~~~~~~ 304 (396)
|.+||+.+............ .+..+ ...+.+.++|+ |+++....... .+++|.|||+.+++...
T Consensus 395 V~v~d~~~~~~~~~~~~~v~--~l~~~g~~~~~v~~~pd---------g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~ 463 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVA--ELQGQGGGSLFIKTHPK---------SSHLYVDTTFNPDARISQSVAVFDLKNLDAKY 463 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEE--EEECSCSCCCCEECCTT---------CCEEEECCTTCSSHHHHTCEEEEETTCTTSCC
T ss_pred EEEEEeCCCCCchhcCeEEE--EEEcCCCCceEEEcCCC---------CCcEEEecCCCCCcccCceEEEEECCCCCCCe
Confidence 99999987221000000111 11111 12346788998 77776321111 26799999999988763
Q ss_pred hhc--------CCCCCCCcceeeeccCCcEEEee-----c-CCcEEEEcCCCcceeeecccc
Q 016032 305 EVM--------DPNITTISPVNKLHPRDDVLASG-----S-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 305 ~~~--------~~~~~~i~~~~~~~~~~~~l~sg-----~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
+.. ..+...+..+ .|+|+|+.|+++ + |+.|.|||..+++++..++.+
T Consensus 464 ~~~~v~~~~~~~~~~~~~~~~-~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 464 QVLPIAEWADLGEGAKRVVQP-EYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp EEECHHHHHCCCSSCCEEEEE-EECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred EEeechhhcccCCCCCceEec-cCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 321 1223455666 899999988854 3 699999999999999888753
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=2.2e-28 Score=214.37 Aligned_cols=219 Identities=10% Similarity=0.059 Sum_probs=151.3
Q ss_pred eeeeccccCCeEEEEecC--------CCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe
Q 016032 13 CAVIRYHSRRVTCLEFHP--------TNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~--------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
+..+.||.+.|++++|+| ++ ++||+|+.|++|+|||+.+....... ..|..+|.+++|+|++..+|++++
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILAG-YPLSSPGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEEE-EECSSCEEEEEEETTEEEEEEEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeeee-cCCCCCcEEEEECCCCCceEEecC
Confidence 456789999999999998 66 79999999999999999887766665 458899999999998446899999
Q ss_pred CCCeEEEEECCCCcccceeecCCCCC----------------CCCCcceeeeEEEeC-CCCCEEEEEecCCeEEEEeCCC
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGW----------------HGPRTWRMLYGMDIN-PEKGVVLVADNFGFLYLVDART 147 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~----------------~~~~~~~~v~~~~~~-~~~~~l~~~~~~g~i~i~d~~~ 147 (396)
.|++|++||+.+++............ ....+...+.++.|+ +++..+++++.|+.+++||+..
T Consensus 207 ~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 207 RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA 286 (393)
T ss_dssp TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--
T ss_pred CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc
Confidence 99999999999876544332211100 001122347778875 7999999999999999999987
Q ss_pred CCCCcccee---------------eecCCccEEEEEecc-CCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeE
Q 016032 148 NSRSGEAIL---------------IHRKGSKVVGLHCNP-IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNS 211 (396)
Q Consensus 148 ~~~~~~~~~---------------~~~~~~~i~~~~~~~-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~ 211 (396)
+.....+.. ............++| .++.++++|+.||.|++||+.+++.... ...|..+|.+
T Consensus 287 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~--~~~~~~~V~s 364 (393)
T 4gq1_A 287 NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI--PIQLGMPIVD 364 (393)
T ss_dssp -----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE--EEECSSCEEE
T ss_pred CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE--ecCCCCcEEE
Confidence 554322110 000111122233443 2344677888999999999987654332 2357889999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcc
Q 016032 212 AYFSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
++|+|+|++||+++.+| +.+|.+.
T Consensus 365 vafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 365 FCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 99999999999998665 6677653
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=8.3e-25 Score=187.48 Aligned_cols=285 Identities=12% Similarity=0.052 Sum_probs=192.5
Q ss_pred EEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC-CCeEEEEECCCCcc-ccee
Q 016032 26 LEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS-DGTVSCTDLETGLA-LSLM 103 (396)
Q Consensus 26 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~~ 103 (396)
..|.++++.++++++.++.|.+||..+++....+. .+...+ .++|+|+ ++++++++. ++.|.+||+.+++. ...+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSD-CSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSS-SCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCC-CCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 35666666778899999999999999888776664 345556 9999999 776555554 89999999999887 5555
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC---eEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEE-EE
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG---FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELL-LS 179 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g---~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~ 179 (396)
...... ..+++|+|++++++++..++ .|.+||+.+++.... ........+++|+| +++++ ++
T Consensus 80 ~~~~~~---------~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~----~~~~~~~~~~~~sp-dg~~l~~~ 145 (331)
T 3u4y_A 80 QEGQSS---------MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST----IPIPYDAVGIAISP-NGNGLILI 145 (331)
T ss_dssp EECSSC---------CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE----EECCTTEEEEEECT-TSSCEEEE
T ss_pred ccCCCC---------ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE----EECCCCccceEECC-CCCEEEEE
Confidence 443221 33489999999999655553 899999988654332 22333578999999 87744 55
Q ss_pred eeCCCc-EEEEecCCCCCCCc--cccCCCCCceeEEEEcCCCCEEEEE-eCCCcEEEEEcccccccCCCcceeecccccc
Q 016032 180 CGNDHF-ARIWDIRRLEAGSS--LCDLPHKRVVNSAYFSPSGSKILTT-SQDNRLRIWDSIFGNLDSPSREIVHSHDFNR 255 (396)
Q Consensus 180 ~~~d~~-i~~wd~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 255 (396)
...++. |.+|++........ .........+..++|+|+|++|+++ ..++.|.+||+.+++....... +..
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~------~~~ 219 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA------VGT 219 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE------EEC
T ss_pred ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee------ccC
Confidence 556688 99999874322111 1112344568999999999966555 4688999999998775111111 111
Q ss_pred cCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch--hhhhcCC----C--CCCCcceeeeccCCcEE
Q 016032 256 HLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL--VAEVMDP----N--ITTISPVNKLHPRDDVL 327 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~--~~~~~~~----~--~~~i~~~~~~~~~~~~l 327 (396)
...+..+.|+|+ |+++.. +...++.|.+||+.+++. +..+... . ......+ +|+|+|++|
T Consensus 220 ~~~~~~~~~spd---------g~~l~v--~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~l 287 (331)
T 3u4y_A 220 NNLPGTIVVSRD---------GSTVYV--LTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQM-ALNKTETKL 287 (331)
T ss_dssp SSCCCCEEECTT---------SSEEEE--ECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCE-EECTTSSEE
T ss_pred CCCCceEEECCC---------CCEEEE--EEcCCCEEEEEECCCCceeeecccccccccCCCCcccccce-EECCCCCEE
Confidence 233457889998 664442 344677899999998876 3222211 1 1111335 899999988
Q ss_pred Eeec--CCcEEEEcCCCcce
Q 016032 328 ASGS--SRSIFIWRPKEKSE 345 (396)
Q Consensus 328 ~sg~--d~~i~iw~~~~~~~ 345 (396)
++++ ++.|.+|++.....
T Consensus 288 ~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 288 FISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEEETTTTEEEEEETTSCEE
T ss_pred EEecCCCCcEEEEEecCCcc
Confidence 6654 68999999987653
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.5e-25 Score=193.06 Aligned_cols=285 Identities=9% Similarity=0.084 Sum_probs=185.1
Q ss_pred cEEEEEeCCCcEEEeeccc-ceeeeEecCCcccceeEEEEecCCCcEEEEEeCC-CeEEEEECC--CCcccceeecCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYK-VSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD-GTVSCTDLE--TGLALSLMNVNPNG 109 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~~~~~~~~~~~~ 109 (396)
.++++++.|+.|++|++.. +.........+...+.+++|+|+ +++|++++.+ +.|.+|++. +++..........
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD-KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCC-CCEEEEeecCCCeEEEEEecCCCCceeeccccccC-
Confidence 4556668899999999963 22221211347778999999999 8888888776 999999998 5543322111111
Q ss_pred CCCCCcceeeeEEEeCCCCCEEEEEec-CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee-CCCcEE
Q 016032 110 WHGPRTWRMLYGMDINPEKGVVLVADN-FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFAR 187 (396)
Q Consensus 110 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~ 187 (396)
..+..++|+|+++++++++. ++.|.+||+..+.. ............+.+++|+| +++++++++ .++.|+
T Consensus 84 -------~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 84 -------GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP-VGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRIC 154 (343)
T ss_dssp -------SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE-EEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEE
T ss_pred -------CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc-ccccccccCCCCceEEEECC-CCCEEEEecCCCCEEE
Confidence 12788999999998877664 78999999952211 12222223334688999999 888777776 889999
Q ss_pred EEecCC-CCCCCc---cccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccc--ccccCCCccee-ecccccccCCc
Q 016032 188 IWDIRR-LEAGSS---LCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIF--GNLDSPSREIV-HSHDFNRHLTP 259 (396)
Q Consensus 188 ~wd~~~-~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~--~~~~~~~~~~~-~~~~~~~~~~~ 259 (396)
+||+.+ .+.... .........+..++|+|++++|++++ .++.|.+|++.. ++... ..... ....+.....+
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-VQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-EEEEECSCTTCCSCCCE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-EeeccccCccccccCCc
Confidence 999975 322111 11112345788999999999776554 789999999954 33210 00000 01111222334
Q ss_pred eeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC--c--cchhhhhcCCCCCCCcceeeeccCCcEEEeec--CC
Q 016032 260 FRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT--T--GQLVAEVMDPNITTISPVNKLHPRDDVLASGS--SR 333 (396)
Q Consensus 260 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~--~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~--d~ 333 (396)
..+.|+|+ |++++. ++..++.|.+|++. + .+.+..+..+. .+..+ +|+|+|++|++++ ++
T Consensus 234 ~~i~~s~d---------g~~l~v--~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~--~~~~~-~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 234 ADIHITPD---------GRHLYA--CDRTASLITVFSVSEDGSVLSKEGFQPTET--QPRGF-NVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp EEEEECTT---------SSEEEE--EETTTTEEEEEEECTTSCCEEEEEEEECSS--SCCCE-EECTTSSEEEEECTTTC
T ss_pred cceEECCC---------CCEEEE--EecCCCEEEEEEEcCCCCceEEeeeecCCC--ccceE-EECCCCCEEEEecCCCC
Confidence 46889998 554442 34578999999998 2 33444444333 36667 8999999887765 79
Q ss_pred cEEEEcC--CCcc
Q 016032 334 SIFIWRP--KEKS 344 (396)
Q Consensus 334 ~i~iw~~--~~~~ 344 (396)
.|.+|++ .+++
T Consensus 300 ~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 300 HISVYEIVGEQGL 312 (343)
T ss_dssp EEEEEEEETTTTE
T ss_pred eEEEEEEcCCCce
Confidence 9999954 4553
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=6.4e-26 Score=199.82 Aligned_cols=273 Identities=10% Similarity=0.075 Sum_probs=196.0
Q ss_pred CCC--CCccce--eeeccccCCeEEEEecCC--------------CCcEEEEEeCC------CcEEEeecccceeeeEec
Q 016032 5 HVI--PDQVNC--AVIRYHSRRVTCLEFHPT--------------NNHILLSGDKK------GQVGVWDFYKVSEKIVYG 60 (396)
Q Consensus 5 ~~~--~~~~~~--~~~~~h~~~v~~~~~~~~--------------~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~ 60 (396)
|++ .++.++ ..+.+|...+..+++++. +.+ ++.++.+ +.|++||+..... ..+
T Consensus 98 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~-l~~~s~~~~~~~~~~i~i~d~~g~~~-~~l- 174 (415)
T 2hqs_A 98 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTR-IAYVVQTNGGQFPYELRVSDYDGYNQ-FVV- 174 (415)
T ss_dssp EECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCE-EEEEEECSSSSCCEEEEEEETTSCSC-EEE-
T ss_pred EeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCE-EEEEEecCCCCccceEEEEcCCCCCC-EEE-
Confidence 566 666655 558899999998888751 434 4444443 7999999986443 333
Q ss_pred CCcccceeEEEEecCCCcEEEEEeCCC---eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEE-EEec
Q 016032 61 NIHSCIVNNIRFNPTNDGTVYAASSDG---TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVL-VADN 136 (396)
Q Consensus 61 ~~~~~~v~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~ 136 (396)
.+|...|.+++|+|+ ++.|++++.++ .|++||+.+++..... ... ..+.+++|+|+++.|+ +++.
T Consensus 175 ~~~~~~v~~~~~Spd-g~~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~---------~~~~~~~~spdg~~la~~~~~ 243 (415)
T 2hqs_A 175 HRSPQPLMSPAWSPD-GSKLAYVTFESGRSALVIQTLANGAVRQVA-SFP---------RHNGAPAFSPDGSKLAFALSK 243 (415)
T ss_dssp EEESSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCS---------SCEEEEEECTTSSEEEEEECT
T ss_pred eCCCCcceeeEEcCC-CCEEEEEEecCCCcEEEEEECCCCcEEEee-cCC---------CcccCEEEcCCCCEEEEEEec
Confidence 458899999999999 89999998875 9999999998775332 221 1288999999999888 5555
Q ss_pred CC--eEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeC-CC--cEEEEecCCCCCCCccccCCCCCceeE
Q 016032 137 FG--FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DH--FARIWDIRRLEAGSSLCDLPHKRVVNS 211 (396)
Q Consensus 137 ~g--~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~~~~~i~~ 211 (396)
++ .|++||+.++.. .....+...+.+++|+| +++.|++++. ++ .|++||+.+.+. .....+...+.+
T Consensus 244 ~g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~ 315 (415)
T 2hqs_A 244 TGSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQD 315 (415)
T ss_dssp TSSCEEEEEETTTCCE----EECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEE
T ss_pred CCCceEEEEECCCCCE----EeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccC
Confidence 55 599999987653 23334555799999999 9998888776 44 677888876432 222245678899
Q ss_pred EEEcCCCCEEEEEeCC---CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc
Q 016032 212 AYFSPSGSKILTTSQD---NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA 288 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 288 (396)
++|+|+|++|++++.+ ..|.+||+.+++... +. .+.....+.|+|+ |++++ .++.
T Consensus 316 ~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-----l~-----~~~~~~~~~~spd---------g~~l~---~~s~ 373 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-----LS-----STFLDETPSLAPN---------GTMVI---YSSS 373 (415)
T ss_dssp EEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-----CC-----CSSSCEEEEECTT---------SSEEE---EEEE
T ss_pred eEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-----ec-----CCCCcCCeEEcCC---------CCEEE---EEEc
Confidence 9999999999988764 589999999876521 11 1113457899998 66665 3444
Q ss_pred cc---ceEEEEcCccchhhhhcCCCCCCCcceeeeccCC
Q 016032 289 LH---PIDFIDITTGQLVAEVMDPNITTISPVNKLHPRD 324 (396)
Q Consensus 289 d~---~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 324 (396)
++ .|++||+. ++....+..+. ..+..+ +|+|.-
T Consensus 374 ~~~~~~l~~~d~~-g~~~~~l~~~~-~~v~~~-~~~~~~ 409 (415)
T 2hqs_A 374 QGMGSVLNLVSTD-GRFKARLPATD-GQVKFP-AWSPYL 409 (415)
T ss_dssp ETTEEEEEEEETT-SCCEEECCCSS-SEEEEE-EECCCC
T ss_pred CCCccEEEEEECC-CCcEEEeeCCC-CCCcCC-cccccc
Confidence 44 79999986 55556666655 667777 899864
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=4.8e-25 Score=209.46 Aligned_cols=291 Identities=8% Similarity=0.030 Sum_probs=200.8
Q ss_pred cCCeEEEEecCCCCcEEEEEeC-CC-----cEEEeecccceeeeEecCCcc------------------------cceeE
Q 016032 20 SRRVTCLEFHPTNNHILLSGDK-KG-----QVGVWDFYKVSEKIVYGNIHS------------------------CIVNN 69 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~-dg-----~i~iwd~~~~~~~~~~~~~~~------------------------~~v~~ 69 (396)
...|.+++|+||| ++|++++. |+ .|++||+.+++...... .+. ..|.+
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD-SKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC-GGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccc-hhhcccccccccchhhhhhhhhhhccccCcce
Confidence 4579999999999 57888887 88 89999999887655552 232 34889
Q ss_pred EEEecCCCcEEEEEeCCCeEEEEECCCC---cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC
Q 016032 70 IRFNPTNDGTVYAASSDGTVSCTDLETG---LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR 146 (396)
Q Consensus 70 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~ 146 (396)
++|+|+ +++|++++. +.|.+||+.++ +.. .+..+. ..+..++|+|+|++|++++. +.|++||+.
T Consensus 114 ~~~SpD-g~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~---------~~~~~~~~SPDG~~la~~~~-~~i~~~d~~ 180 (741)
T 2ecf_A 114 YQWSPD-AQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGE---------GFATDAKLSPKGGFVSFIRG-RNLWVIDLA 180 (741)
T ss_dssp CEECTT-SSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSS---------SCEEEEEECTTSSEEEEEET-TEEEEEETT
T ss_pred eEECCC-CCEEEEEeC-CcEEEEECCCCCcceEE-EcccCC---------cccccccCCCCCCEEEEEeC-CcEEEEecC
Confidence 999999 899988886 99999999987 433 222211 22889999999999998874 699999998
Q ss_pred CCCCCccceeeecCCc----------------cEEEEEeccCCCCEEEEeeCCC--------------------------
Q 016032 147 TNSRSGEAILIHRKGS----------------KVVGLHCNPIQPELLLSCGNDH-------------------------- 184 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~----------------~i~~~~~~~~~~~~l~~~~~d~-------------------------- 184 (396)
++...... ..+.. .+..++|+| +++.|++++.|+
T Consensus 181 ~g~~~~~~---~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 181 SGRQMQLT---ADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp TTEEEECC---CCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred CCCEEEec---cCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 75432111 11111 147799999 999999887665
Q ss_pred -------cEEEEecCC-CCCCCccccCCCCCceeEEEEcCCCCEEEEEeC-----CCcEEEEEcccccccCCCcceeecc
Q 016032 185 -------FARIWDIRR-LEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ-----DNRLRIWDSIFGNLDSPSREIVHSH 251 (396)
Q Consensus 185 -------~i~~wd~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~ 251 (396)
.|++||+.+ .+.........+...+..++| |+|++|++++. +..|.+||+.+++...... ..
T Consensus 257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~----~~ 331 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH----ET 331 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE----EE
T ss_pred CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE----cC
Confidence 788999876 543222111146778999999 99999987764 5679999999887532111 11
Q ss_pred cccccC-CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC-ccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 252 DFNRHL-TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT-TGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 252 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
..... ....+.|+|+ |++++ ++..++.++||.+. ++. ...+..+. ..+..+.+|+|+|+.|+.
T Consensus 332 -~~~~~~~~~~~~~spd---------g~~~~---~~~~~g~~~l~~~~~~~~-~~~l~~~~-~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 332 -SPTWVPLHNSLRFLDD---------GSILW---SSERTGFQHLYRIDSKGK-AAALTHGN-WSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp -CSSCCCCCSCCEECTT---------SCEEE---EECTTSSCEEEEECSSSC-EEESCCSS-SCEEEEEEEETTTTEEEE
T ss_pred -CCCcCCcCCceEECCC---------CeEEE---EecCCCccEEEEEcCCCC-eeeeeecc-eEEEeEeEEeCCCCEEEE
Confidence 11111 1125789998 66555 56678878888765 344 55565554 445554359999987765
Q ss_pred -ec-CC--cEEEEcCCC-cceeeec
Q 016032 330 -GS-SR--SIFIWRPKE-KSELVEQ 349 (396)
Q Consensus 330 -g~-d~--~i~iw~~~~-~~~~~~~ 349 (396)
++ ++ .++||++.. +.....+
T Consensus 397 ~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 397 RAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp EECSSCTTCBEEEEEETTCCCCEEC
T ss_pred EEeCCCCceEEEEEEEcCCCCeeec
Confidence 55 55 899999864 4434443
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=6.5e-25 Score=188.54 Aligned_cols=280 Identities=13% Similarity=0.093 Sum_probs=199.0
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCccc-ceeEEEEecCCCcE-EEEEeCCCeEEEEECCCCcccceeecCCCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IVNNIRFNPTNDGT-VYAASSDGTVSCTDLETGLALSLMNVNPNGWH 111 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 111 (396)
.+|++++.++.|.+||+.+++....+..++.. .+..++|+|+ ++. ++++..++.|.+||+.+++.+..+......
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-- 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPG-GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE-- 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTT-SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT--
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCC-CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc--
Confidence 47899999999999999988877766433322 5889999999 655 566667899999999999887766543210
Q ss_pred CCCcceeeeEEEeCCCCCEEEEEe------------cCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEE
Q 016032 112 GPRTWRMLYGMDINPEKGVVLVAD------------NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179 (396)
Q Consensus 112 ~~~~~~~v~~~~~~~~~~~l~~~~------------~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 179 (396)
.....+..++|+|++++++++. .++.|.+||+.+++.... ...+..+.+++|+| ++++|++
T Consensus 79 --~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~----~~~~~~~~~~~~s~-dg~~l~~ 151 (337)
T 1pby_B 79 --ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA----FEAPRQITMLAWAR-DGSKLYG 151 (337)
T ss_dssp --EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE----EECCSSCCCEEECT-TSSCEEE
T ss_pred --cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE----EeCCCCcceeEECC-CCCEEEE
Confidence 0011267899999999998886 579999999987654322 12233577899999 8888877
Q ss_pred eeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC------------------------cEEEEEc
Q 016032 180 CGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN------------------------RLRIWDS 235 (396)
Q Consensus 180 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~------------------------~i~iwd~ 235 (396)
+ ++.|++||+.+.+....+.......+ +.|+|++..|+..+..+ .|.+||+
T Consensus 152 ~--~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 152 L--GRDLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp E--SSSEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred e--CCeEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 7 68899999987554333222111122 37899988776554332 4689999
Q ss_pred ccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCc
Q 016032 236 IFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTIS 315 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~ 315 (396)
.+++.. .. ... .....+..+.|+|+ |++++ .+ ++.|.+||+.+++.+..+..+ ..+.
T Consensus 227 ~~~~~~-~~----~~~--~~~~~~~~~~~s~d---------g~~l~---~~--~~~v~~~d~~~~~~~~~~~~~--~~~~ 283 (337)
T 1pby_B 227 ETGEMA-MR----EVR--IMDVFYFSTAVNPA---------KTRAF---GA--YNVLESFDLEKNASIKRVPLP--HSYY 283 (337)
T ss_dssp TTCCEE-EE----EEE--ECSSCEEEEEECTT---------SSEEE---EE--ESEEEEEETTTTEEEEEEECS--SCCC
T ss_pred CCCCce-Ee----ecC--CCCCceeeEEECCC---------CCEEE---Ee--CCeEEEEECCCCcCcceecCC--Ccee
Confidence 887653 10 000 11123446889998 66666 23 689999999999887776544 3455
Q ss_pred ceeeeccCCcEEEeec-CCcEEEEcCCCcceeeecccc
Q 016032 316 PVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 316 ~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
.+ +|+|+|++|++++ ++.|++||+.+++.+..+..+
T Consensus 284 ~~-~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 284 SV-NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EE-EECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred eE-EECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 66 8999999888888 999999999999988877654
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=2.8e-24 Score=185.89 Aligned_cols=281 Identities=12% Similarity=0.084 Sum_probs=201.3
Q ss_pred ccCCeEEEEecCCCCcEEEEEeC-------CCcEEEeecccceeeeEecCCcccceeEEEEecCCCc-EEEEEeCCCeEE
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDK-------KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDG-TVYAASSDGTVS 90 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~dg~v~ 90 (396)
....+..++|+|+++ .|++++. ++.|.+||..+++....+. ....+..++|+|+ ++ .+++...++.|.
T Consensus 39 ~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~s~d-g~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQEN-ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--NDLKPFGATINNT-TQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTT-EEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--ESSCCCSEEEETT-TTEEEEEETTTTEEE
T ss_pred hccCccceEECCCCC-EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--cCCCcceEEECCC-CCEEEEEecCCCEEE
Confidence 456788999999995 4555543 5689999999888777664 3455889999999 66 555566689999
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe--cCCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD--NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
+||..+++....+...............+.+++|+|+++.+++++ .++.|.+||+.+++.... .......+.+++
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~ 191 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA---IQNTGKMSTGLA 191 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE---ECCCCTTCCCCE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE---ecCCCCccceEE
Confidence 999999998877765432211111112367899999999888776 478899999988654432 121333578899
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC--CCCCceeEEEEcCCCCEEEEEeC-CCcEEEEEcccccccCCCc
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL--PHKRVVNSAYFSPSGSKILTTSQ-DNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~ 245 (396)
|+| +++.+++++.++.|.+||+.+.+....+... ++...+..++|+|++++|++++. ++.|.+||+.+++......
T Consensus 192 ~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 192 LDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred ECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 999 9999999999999999999876543333221 24556888999999998777665 4899999998877533111
Q ss_pred ceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc
Q 016032 246 EIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD 325 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 325 (396)
.. .+..+.|+|+ |+++.. +...++.|.+||+.+++.+..+..+. ....+ +|+|+|+
T Consensus 271 -------~~---~~~~~~~s~d---------g~~l~v--~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~-~~s~dg~ 326 (353)
T 3vgz_A 271 -------AP---ESLAVLFNPA---------RNEAYV--THRQAGKVSVIDAKSYKVVKTFDTPT--HPNSL-ALSADGK 326 (353)
T ss_dssp -------CS---SCCCEEEETT---------TTEEEE--EETTTTEEEEEETTTTEEEEEEECCS--EEEEE-EECTTSC
T ss_pred -------cC---CCceEEECCC---------CCEEEE--EECCCCeEEEEECCCCeEEEEEecCC--CCCeE-EEcCCCC
Confidence 11 1236788887 543331 34567899999999999887776543 44566 8999999
Q ss_pred EEEeec
Q 016032 326 VLASGS 331 (396)
Q Consensus 326 ~l~sg~ 331 (396)
+|+.+.
T Consensus 327 ~l~v~~ 332 (353)
T 3vgz_A 327 TLYVSV 332 (353)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777655
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2.4e-24 Score=203.50 Aligned_cols=291 Identities=14% Similarity=0.109 Sum_probs=195.1
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC----
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET---- 96 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~---- 96 (396)
..|.+++|+|+ ..++++. ++.|++||+.+++..... .+...+.+++|+|+ ++.|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~Spd-G~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTYLF--DTNEETASLDFSPV-GDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEEEE--CCTTCCTTCEECTT-SSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEEcc--CCcccccCCcCCCC-CCEEEEE-ECCeEEEEecCccccc
Confidence 57999999999 4655553 599999999887665544 36778999999999 8888885 589999999998
Q ss_pred -CcccceeecCCCCC-CCC----CcceeeeEEEeCCCCCEEEEEe---------------------------------cC
Q 016032 97 -GLALSLMNVNPNGW-HGP----RTWRMLYGMDINPEKGVVLVAD---------------------------------NF 137 (396)
Q Consensus 97 -~~~~~~~~~~~~~~-~~~----~~~~~v~~~~~~~~~~~l~~~~---------------------------------~~ 137 (396)
++............ .+. .....+.+++|+|+|++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 76544332211100 000 0001157899999999999987 34
Q ss_pred CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCC-----cEEEEecCCCCCCCccccCCCC---Cce
Q 016032 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDH-----FARIWDIRRLEAGSSLCDLPHK---RVV 209 (396)
Q Consensus 138 g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~---~~i 209 (396)
..|++||+.++.... ......+...+.+++|+| +++.|++++.++ .|++||+.+++....+....+. ..+
T Consensus 235 ~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVY-LQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEE-CCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEe-eccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 689999998765321 111123445799999999 999898877665 8999999875222222211122 234
Q ss_pred eEEEEcC--CCCEEEEEeCCCcEEEEEcc-cccccCCCcceeecccccccCC-cee-EEeCCCCCCCceeeEeeeeeeec
Q 016032 210 NSAYFSP--SGSKILTTSQDNRLRIWDSI-FGNLDSPSREIVHSHDFNRHLT-PFR-AEWDPKDPSESLAVIGRYISENY 284 (396)
Q Consensus 210 ~~~~~~~--~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~ 284 (396)
..++|+| +|++|++++.++.+++|.+. ++...... ..+.. ... +.|+|+ |+.++.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l---------~~~~~~v~~~~~~spd---------g~~l~~-- 372 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV---------TKGEWEVTNFAGFDPK---------GTRLYF-- 372 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC---------CCSSSCEEEEEEECTT---------SSEEEE--
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec---------CCCCeEEEeeeEEcCC---------CCEEEE--
Confidence 6789999 99999999999999999886 33321111 11111 123 689998 544432
Q ss_pred cccccc----ceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-C----CcEEEEcCCCcc
Q 016032 285 NGAALH----PIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-S----RSIFIWRPKEKS 344 (396)
Q Consensus 285 ~g~~d~----~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d----~~i~iw~~~~~~ 344 (396)
++..++ .|..||+.+++ ...+. +. ..+..+ +|+|+|++|+... + +.|++|++.+++
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~-~~~~~~-~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLT-PE-SGMHRT-QLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESC-CS-SSEEEE-EECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EecCCCCceEEEEEEEcCCCC-ceecc-CC-CceEEE-EECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 233333 67777877765 33333 22 445666 8999999888753 3 569999998876
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.1e-23 Score=180.55 Aligned_cols=272 Identities=8% Similarity=0.049 Sum_probs=183.4
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee-eeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE-KIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
|++.++.....+..+...+ +++|+|++..+++++..++.|.+||+.++.. ...+ ..+..+..+++|+|+ +++++++
T Consensus 25 ~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~d-g~~l~~~ 101 (331)
T 3u4y_A 25 FSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-QEGQSSMADVDITPD-DQFAVTV 101 (331)
T ss_dssp EETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-EECSSCCCCEEECTT-SSEEEEC
T ss_pred EeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-ccCCCCccceEECCC-CCEEEEe
Confidence 5566666667777777777 9999999954555555589999999998876 4444 445555555999999 8888855
Q ss_pred eCCC---eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-ecCCe-EEEEeCCCCCCCccc-eee
Q 016032 84 SSDG---TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-DNFGF-LYLVDARTNSRSGEA-ILI 157 (396)
Q Consensus 84 ~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~-i~i~d~~~~~~~~~~-~~~ 157 (396)
..++ .|.+||+.+++.+..+..... +.+++|+|++++++++ ..++. |.+|++......... ...
T Consensus 102 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~----------~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~ 171 (331)
T 3u4y_A 102 TGLNHPFNMQSYSFLKNKFISTIPIPYD----------AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEF 171 (331)
T ss_dssp CCSSSSCEEEEEETTTTEEEEEEECCTT----------EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEE
T ss_pred cCCCCcccEEEEECCCCCeEEEEECCCC----------ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcc
Confidence 5443 899999999888776654322 6899999999866655 45578 999998764332111 111
Q ss_pred ecCCccEEEEEeccCCCCEE-EEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEc
Q 016032 158 HRKGSKVVGLHCNPIQPELL-LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDS 235 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~ 235 (396)
.........++|+| +++++ +++..++.|++||+.+.+....+..+.....+..++|+|+|++|++++ .++.|.+||+
T Consensus 172 ~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 172 ISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp ECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 23344689999999 88855 555568999999998655422233333456778999999999776655 4778999999
Q ss_pred ccccccCCCcceeecccc-cc-cCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 236 IFGNLDSPSREIVHSHDF-NR-HLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
.+++..... ........ .. ......+.|+|+ |++++. ++..++.|.+||+.+...
T Consensus 251 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spd---------g~~l~v--~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 251 LSGTLSFVK-SFGHGLLIDPRPLFGANQMALNKT---------ETKLFI--SANISRELKVFTISGKVV 307 (331)
T ss_dssp TTTEEEEEE-EEECCCCCCCGGGTTCCCEEECTT---------SSEEEE--EETTTTEEEEEETTSCEE
T ss_pred CCCceeeec-ccccccccCCCCcccccceEECCC---------CCEEEE--ecCCCCcEEEEEecCCcc
Confidence 987752100 00000000 00 001124689998 665541 355677999999976543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=9.4e-24 Score=177.74 Aligned_cols=256 Identities=14% Similarity=0.177 Sum_probs=175.2
Q ss_pred EEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC-CcccceeecCCCCCCCCCcc
Q 016032 38 SGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET-GLALSLMNVNPNGWHGPRTW 116 (396)
Q Consensus 38 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 116 (396)
+++.|+.|++||+.+++..... .|...|.+++|+|+ +.+|++++ ++.|.+||+.+ ++.......+..
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spd-g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-------- 84 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPD-GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFAT-------- 84 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE--EESSCCEEEEECTT-SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCC--------
T ss_pred CCCcceeEEEEeCCCCceeeec--cCCcceEeeEECCC-CCEEEEEc-CCeEEEEeCCCCCCceEecccccc--------
Confidence 4567899999999988766554 38899999999999 88888887 78999999998 766544432211
Q ss_pred eeeeEEEeCCCCCEEEEEec--C--CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE-EeeCCCcEEEEec
Q 016032 117 RMLYGMDINPEKGVVLVADN--F--GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL-SCGNDHFARIWDI 191 (396)
Q Consensus 117 ~~v~~~~~~~~~~~l~~~~~--~--g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~i~~wd~ 191 (396)
..+.+++|+|++++|+++.. + ..|..+++..+.. . ... ....+..++|+| ++..|+ +++.++.+++|++
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~--~--~~~-~~~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP--R--LMT-KNLPSYWHGWSP-DGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC--E--ECC-SSSSEEEEEECT-TSSEEEEEEEETTEEEEEEE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce--E--Eee-cCCCccceEECC-CCCEEEEEECCCCceEEEEE
Confidence 23788999999999999983 3 4555555554331 1 112 222488999999 888766 7788999999997
Q ss_pred CCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcc-cccccCCCcceeecccccccCCceeEEeCCCCC
Q 016032 192 RRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSI-FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDP 269 (396)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
.... ........+...+.+++|+|++++|++++ .++.+++|++. .+...... .. .......+.|+|+
T Consensus 159 ~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~----~~----~~~~~~~~~~s~d-- 227 (297)
T 2ojh_A 159 DIDS-GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI----TD----SAYGDWFPHPSPS-- 227 (297)
T ss_dssp ETTT-CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC----CC----CSEEEEEEEECTT--
T ss_pred ECCC-CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE----ec----CCcccCCeEECCC--
Confidence 5322 22222335677899999999999887766 58999999986 22221110 00 0112246889998
Q ss_pred CCceeeEeeeeeeecccc--------cccceEEEEcCccchhhh--hcCCCCCCCcceeeeccCCcEEEeec
Q 016032 270 SESLAVIGRYISENYNGA--------ALHPIDFIDITTGQLVAE--VMDPNITTISPVNKLHPRDDVLASGS 331 (396)
Q Consensus 270 ~~~~~~~g~~~~~~~~g~--------~d~~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~sg~ 331 (396)
|++++...... .++.|++||+.+++.... +.++. ..+..+ +|+|++++|++++
T Consensus 228 -------g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~-~~spdg~~l~~~~ 290 (297)
T 2ojh_A 228 -------GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ-GTMNSP-NWSPDGDEFAYVR 290 (297)
T ss_dssp -------SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST-TTSCSC-CBCTTSSEEEEEE
T ss_pred -------CCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC-cccccc-eECCCCCEEEEEE
Confidence 55555211110 236799999988865332 32433 567777 8999999999877
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.1e-24 Score=203.36 Aligned_cols=292 Identities=8% Similarity=0.064 Sum_probs=193.3
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCccc---ceeEEEEecCCCcEEEEEeCC---------Ce
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC---IVNNIRFNPTNDGTVYAASSD---------GT 88 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d---------g~ 88 (396)
..+.+++|+|+| +++++ +.||.|++||+.+++....+ ..|.. .|.+++|+|+ +++|++++.+ +.
T Consensus 17 ~~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~~~~-~~~~~~~~~v~~~~~SpD-g~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 17 IHDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTSTVLI-EGKKIESLRAIRYEISPD-REYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCEEEE-CTTTTTTTTCSEEEECTT-SSEEEEEESCCCCSSSCCCSE
T ss_pred ccccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEEEEe-ccccccccccceEEECCC-CCEEEEEecCccceeecceee
Confidence 347889999999 56666 68999999999998776665 44554 4999999999 9999988764 78
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC-------
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG------- 161 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~------- 161 (396)
+.+||+.+++.. .+.... .+ ...+..++|+|+|+.|++++. +.|++||+.++.... ........
T Consensus 93 i~~~d~~~~~~~-~l~~~~----~~--~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~-~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 93 YVLSKIPHGDPQ-SLDPPE----VS--NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR-VVSTGKEGVIYNGLS 163 (723)
T ss_dssp EEEEESSSCCCE-ECCCTT----CC--SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE-EECCCBTTTEEEEEC
T ss_pred EEEEECCCCceE-eccCCc----cc--cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE-EecCCCCCceECccc
Confidence 899999988762 222111 11 112678899999999999886 799999998865432 11111111
Q ss_pred ---------ccEEEEEeccCCCCEEEEeeCCC----------------------------------cEEEEecCCCCCCC
Q 016032 162 ---------SKVVGLHCNPIQPELLLSCGNDH----------------------------------FARIWDIRRLEAGS 198 (396)
Q Consensus 162 ---------~~i~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~~ 198 (396)
..+.+++|+| +++.|++++.++ .|++||+.+.+...
T Consensus 164 ~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp CHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred ceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 1237899999 999999887543 79999997655322
Q ss_pred ccccC----CCCCceeEEEEcCCCCEEEEEeC----CCcEEEEEcccccccCCCcceeecccccccCC--ceeEEeCCCC
Q 016032 199 SLCDL----PHKRVVNSAYFSPSGSKILTTSQ----DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT--PFRAEWDPKD 268 (396)
Q Consensus 199 ~~~~~----~~~~~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 268 (396)
.+... .+...+..++|+|+|++|++.+. +..|.+||+.+++...... . ....... ...+.|+|+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~----~-~~~~~~~~~~~~~~~spd- 316 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE----D-ESEAWLHRQNEEPVFSKD- 316 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE----E-ECSSCCCCCCCCCEECTT-
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE----e-ccCCEEeccCCCceEcCC-
Confidence 22211 13567899999999998877653 3579999998887532110 0 0011111 125789998
Q ss_pred CCCceeeEeeeeeeeccccccc------ceEEEE-cCccch--hhhhcCCCCCCCcceeeeccCCcEEEeec--C--CcE
Q 016032 269 PSESLAVIGRYISENYNGAALH------PIDFID-ITTGQL--VAEVMDPNITTISPVNKLHPRDDVLASGS--S--RSI 335 (396)
Q Consensus 269 ~~~~~~~~g~~~~~~~~g~~d~------~i~vwd-~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~sg~--d--~~i 335 (396)
|+.++.. ++..++ .|.+|| ..+++. ...+..+. ..+....+|+|+|+.|+..+ + +.+
T Consensus 317 --------g~~l~~~-~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~ 386 (723)
T 1xfd_A 317 --------GRKFFFI-RAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-WDVTKILAYDEKGNKIYFLSTEDLPRRR 386 (723)
T ss_dssp --------SCSEEEE-EEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-SCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred --------CCeEEEE-EecccCCCcceeEEEEEeccCCCCccceeEeecCC-eEEEeeeEEcCCCCEEEEEEcCCCCcce
Confidence 5544321 122333 577788 344441 44554333 33333237999999987654 4 889
Q ss_pred EEEcCCC
Q 016032 336 FIWRPKE 342 (396)
Q Consensus 336 ~iw~~~~ 342 (396)
+||++..
T Consensus 387 ~l~~~~~ 393 (723)
T 1xfd_A 387 QLYSANT 393 (723)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 9999864
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=7.5e-23 Score=176.49 Aligned_cols=279 Identities=9% Similarity=0.082 Sum_probs=176.7
Q ss_pred CCcEEEeeccc--ceeeeEecCCcccceeEEEEecCCCcEEEEEeC---CCeEEEEECCCCccccee--ecCCCCCCCCC
Q 016032 42 KGQVGVWDFYK--VSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS---DGTVSCTDLETGLALSLM--NVNPNGWHGPR 114 (396)
Q Consensus 42 dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~ 114 (396)
++.|.+|++.. +.........+...+..++|+|+ ++ |++++. ++.|.+|++.+++..... ....
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spd-g~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~------- 85 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAK-DC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG------- 85 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTT-CE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES-------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccC-Ce-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC-------
Confidence 45688887754 43333222345677889999999 77 555543 689999999776532221 1111
Q ss_pred cceeeeEEEeCCCCCEEEEEe-cCCeEEEEeCCCCCCCccceeeec---------CCccEEEEEeccCCCCEEEEeeCCC
Q 016032 115 TWRMLYGMDINPEKGVVLVAD-NFGFLYLVDARTNSRSGEAILIHR---------KGSKVVGLHCNPIQPELLLSCGNDH 184 (396)
Q Consensus 115 ~~~~v~~~~~~~~~~~l~~~~-~~g~i~i~d~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~l~~~~~d~ 184 (396)
..+..++|+|++++|++++ .++.|.+|++.............. ....+.+++|+| +++++++...++
T Consensus 86 --~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~ 162 (347)
T 3hfq_A 86 --TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSD 162 (347)
T ss_dssp --CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTT
T ss_pred --CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCC
Confidence 1277899999999888887 678999999964322221111111 112488899999 888777777789
Q ss_pred cEEEEecCCCCCCCccc--cCCCCCceeEEEEcCCCCEEEE-EeCCCcEEEEEccc--ccccCCCccee-ecccccccCC
Q 016032 185 FARIWDIRRLEAGSSLC--DLPHKRVVNSAYFSPSGSKILT-TSQDNRLRIWDSIF--GNLDSPSREIV-HSHDFNRHLT 258 (396)
Q Consensus 185 ~i~~wd~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~iwd~~~--~~~~~~~~~~~-~~~~~~~~~~ 258 (396)
.|++|++.......... .......+..++|+|+|++|++ +..++.|.+|++.. ++... ..... ....+.....
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 241 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ-LGIVKTIPADYTAHNG 241 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE-EEEEESSCTTCCSCCE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE-eeeeeecCCCCCCCCc
Confidence 99999997322111111 1123346788999999996665 45688999999874 33211 00000 0111111233
Q ss_pred ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc-c--chhhhhcCCCCCCCcceeeeccCCcEEEeec--CC
Q 016032 259 PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT-G--QLVAEVMDPNITTISPVNKLHPRDDVLASGS--SR 333 (396)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~--d~ 333 (396)
+..++|+|+ |+++.. +...++.|.+|++.. + +.+..+..+. ..+..+ +|+|+|++|++++ ++
T Consensus 242 ~~~i~~spd---------G~~l~v--~~~~~~~v~v~~~~~~g~~~~~~~~~~~~-~~~~~~-~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 242 AAAIRLSHD---------GHFLYV--SNRGYNTLAVFAVTADGHLTLIQQISTEG-DFPRDF-DLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp EEEEEECTT---------SCEEEE--EEETTTEEEEEEECGGGCEEEEEEEECSS-SCCCEE-EECTTSSEEEEEETTTT
T ss_pred ceeEEECCC---------CCEEEE--EeCCCCEEEEEEECCCCcEEEeEEEecCC-CCcCeE-EECCCCCEEEEEEcCCC
Confidence 456889998 665531 345578999999863 2 3333443332 345666 8999999888866 59
Q ss_pred cEEEE--cCCCccee
Q 016032 334 SIFIW--RPKEKSEL 346 (396)
Q Consensus 334 ~i~iw--~~~~~~~~ 346 (396)
.|.+| +..++++.
T Consensus 309 ~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 309 NATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEECTTTCCEE
T ss_pred cEEEEEEeCCCCeEE
Confidence 99999 66677654
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=5.1e-23 Score=177.14 Aligned_cols=252 Identities=14% Similarity=0.164 Sum_probs=164.9
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCC-CcEEEeecc--ccee--eeEecCCcccceeEEEEecCCCcEEEEEe-CCCeEE
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKK-GQVGVWDFY--KVSE--KIVYGNIHSCIVNNIRFNPTNDGTVYAAS-SDGTVS 90 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~ 90 (396)
..|...+.+++|+|++ ++|++++.+ +.|.+|++. ++.. ...+ . ....+..++|+|+ +++|++++ .++.|.
T Consensus 34 ~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~s~d-g~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAAES-A-LPGSLTHISTDHQ-GQFVFVGSYNAGNVS 109 (343)
T ss_dssp EECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEE-E-CSSCCSEEEECTT-SSEEEEEETTTTEEE
T ss_pred EecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceeecccc-c-cCCCCcEEEEcCC-CCEEEEEecCCCeEE
Confidence 3577889999999999 556666665 999999997 4432 2223 2 2337899999999 77776655 488999
Q ss_pred EEECCCC---cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-cCCeEEEEeCCCCCCCccce---eeecCCcc
Q 016032 91 CTDLETG---LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-NFGFLYLVDARTNSRSGEAI---LIHRKGSK 163 (396)
Q Consensus 91 iwd~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~i~d~~~~~~~~~~~---~~~~~~~~ 163 (396)
+||+..+ +....+.... .+.+++|+|+++++++++ .++.|.+||+.......... .....+..
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLD----------GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAG 179 (343)
T ss_dssp EEEEETTEEEEEEEEECCCT----------TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCC
T ss_pred EEECCCCccccccccccCCC----------CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCC
Confidence 9999533 3333322111 178899999999888887 88999999998722222111 11223346
Q ss_pred EEEEEeccCCCCEEE-EeeCCCcEEEEecCC--CCC--CCccccC----CCCCceeEEEEcCCCCEEEEE-eCCCcEEEE
Q 016032 164 VVGLHCNPIQPELLL-SCGNDHFARIWDIRR--LEA--GSSLCDL----PHKRVVNSAYFSPSGSKILTT-SQDNRLRIW 233 (396)
Q Consensus 164 i~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~--~~~--~~~~~~~----~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iw 233 (396)
+..++|+| ++.+++ ++..++.|.+|++.. ... ...+... .....+..++|+|++++|+++ ..++.|.+|
T Consensus 180 ~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 180 PRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF 258 (343)
T ss_dssp EEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE
Confidence 88999999 888665 445789999999953 111 1111111 113456789999999888754 478999999
Q ss_pred Eccc--ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEc--Cccc
Q 016032 234 DSIF--GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDI--TTGQ 301 (396)
Q Consensus 234 d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~--~~~~ 301 (396)
|+.. +... ... .......+..+.|+|+ |++++. ++..++.|.+|++ .+++
T Consensus 259 d~~~~~~~~~-----~~~--~~~~~~~~~~~~~s~d---------g~~l~~--~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 259 SVSEDGSVLS-----KEG--FQPTETQPRGFNVDHS---------GKYLIA--AGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EECTTSCCEE-----EEE--EEECSSSCCCEEECTT---------SSEEEE--ECTTTCEEEEEEEETTTTE
T ss_pred EEcCCCCceE-----Eee--eecCCCccceEEECCC---------CCEEEE--ecCCCCeEEEEEEcCCCce
Confidence 9973 2211 011 1111112457889998 665551 3346799999954 4554
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=7.7e-23 Score=176.50 Aligned_cols=284 Identities=12% Similarity=0.048 Sum_probs=190.6
Q ss_pred EEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEE-EEEeCCCeEEEEECCCCccccee
Q 016032 25 CLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTV-YAASSDGTVSCTDLETGLALSLM 103 (396)
Q Consensus 25 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~ 103 (396)
.+++++++ +++++++.++.|.+||+.+++....+..+....+..++|+|+ ++.+ +++..++.|.+||+.+++....+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPD-NRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTT-SSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCC-CCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 45677877 789999999999999999887776664322236889999999 6654 56667899999999998877666
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC------------CeEEEEeCCCCCCCccceeeecCCccEEEEEecc
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF------------GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNP 171 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~ 171 (396)
...... ......+..++|+|+++++++++.+ +.|.+||+.+++....... ......+.+++|+|
T Consensus 82 ~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 82 NLSSVP---GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-FPMPRQVYLMRAAD 157 (349)
T ss_dssp ESCCST---TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE-EECCSSCCCEEECT
T ss_pred Eccccc---ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee-ccCCCcccceeECC
Confidence 543210 0001226789999999999998865 8999999988554332222 22233588899999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccccCC--CC--------------------CceeEEEEcCCCCE---------
Q 016032 172 IQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP--HK--------------------RVVNSAYFSPSGSK--------- 220 (396)
Q Consensus 172 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~--~~--------------------~~i~~~~~~~~~~~--------- 220 (396)
++. +++++. .|++||+.+.+....+.... .. .....+++++++..
T Consensus 158 -dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 233 (349)
T 1jmx_B 158 -DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY 233 (349)
T ss_dssp -TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred -CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccce
Confidence 888 555543 49999997655432221110 00 03445667654421
Q ss_pred --EEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCC-CCCCCceeeEeeeeeeecccccccceEEEEc
Q 016032 221 --ILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDP-KDPSESLAVIGRYISENYNGAALHPIDFIDI 297 (396)
Q Consensus 221 --l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~ 297 (396)
+......+.+++|++.. ....+..+.|+| + |++++ .+ ++.|.+||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~sp~d---------g~~l~---~~--~~~v~~~d~ 282 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFAD-----------------LTELYFTGLRSPKD---------PNQIY---GV--LNRLAKYDL 282 (349)
T ss_dssp EEEEEETTTCCEEEEEEEE-----------------CSSCEEEEEECSSC---------TTEEE---EE--ESEEEEEET
T ss_pred eEEEEeccCCcEEeccccc-----------------CCCcceeeEecCCC---------CCEEE---EE--cCeEEEEEC
Confidence 12233345555555421 111234678888 7 65655 23 788999999
Q ss_pred CccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeecccc
Q 016032 298 TTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
.+++.+..+..+ ..+..+ +|+|+|++|++++ ++.|++||+.+++.+..+..+
T Consensus 283 ~~~~~~~~~~~~--~~~~~~-~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 283 KQRKLIKAANLD--HTYYCV-AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEECS--SCCCEE-EECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred ccCeEEEEEcCC--CCccce-EECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 999887776543 234566 8999998888877 999999999999988877654
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2e-23 Score=198.34 Aligned_cols=288 Identities=11% Similarity=0.082 Sum_probs=192.2
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEeecccc---eeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc
Q 016032 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKV---SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA 99 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (396)
|.+++|+||| ++|++++. +.|++||+.++ .... + ..|...+..++|+|+ +++|+.++ ++.|++||+.+++.
T Consensus 111 v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~-l-~~~~~~~~~~~~SPD-G~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 111 IVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQ-L-THGEGFATDAKLSPK-GGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp SCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCB-C-CCSSSCEEEEEECTT-SSEEEEEE-TTEEEEEETTTTEE
T ss_pred cceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEE-c-ccCCcccccccCCCC-CCEEEEEe-CCcEEEEecCCCCE
Confidence 8999999999 56777775 89999999887 4333 3 457788999999999 88888887 56999999998766
Q ss_pred cceeecCCCCC-CCCC------cceeeeEEEeCCCCCEEEEEecCC---------------------------------e
Q 016032 100 LSLMNVNPNGW-HGPR------TWRMLYGMDINPEKGVVLVADNFG---------------------------------F 139 (396)
Q Consensus 100 ~~~~~~~~~~~-~~~~------~~~~v~~~~~~~~~~~l~~~~~~g---------------------------------~ 139 (396)
........... .+.. ....+.+++|+|+|+.|++++.++ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 54332211100 0000 001147799999999999987665 8
Q ss_pred EEEEeCCC-CCCCccceeeecCCccEEEEEeccCCCCEEEEeeC-----CCcEEEEecCCCCCCCccccCCCCC---cee
Q 016032 140 LYLVDART-NSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-----DHFARIWDIRRLEAGSSLCDLPHKR---VVN 210 (396)
Q Consensus 140 i~i~d~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~---~i~ 210 (396)
|++||+.+ ++... ......+...+..++| | +++.|++++. +..|++||+.+++....+.. .... .+.
T Consensus 265 l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~ 340 (741)
T 2ecf_A 265 LGVISPAEQAQTQW-IDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE-TSPTWVPLHN 340 (741)
T ss_dssp EEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE-ECSSCCCCCS
T ss_pred EEEEECCCCCceEE-ecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc-CCCCcCCcCC
Confidence 89999987 65321 1111134557999999 9 9998887653 56899999987554333221 1112 456
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccc-ccccCCCcceeecccccccCCceeE-EeCCCCCCCceeeEeeeeeeeccccc
Q 016032 211 SAYFSPSGSKILTTSQDNRLRIWDSIF-GNLDSPSREIVHSHDFNRHLTPFRA-EWDPKDPSESLAVIGRYISENYNGAA 288 (396)
Q Consensus 211 ~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~ 288 (396)
.++|+|+|+++++++.+|.++||.+.. +. ... +... ......+ .|+|+ |+.++. +++.
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~----l~~~----~~~v~~~~~~s~d---------g~~l~~--~~~~ 400 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAA----LTHG----NWSVDELLAVDEK---------AGLAYF--RAGI 400 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEE----SCCS----SSCEEEEEEEETT---------TTEEEE--EECS
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eee----eeec----ceEEEeEeEEeCC---------CCEEEE--EEeC
Confidence 899999999999999999888887752 22 111 1111 1111244 58888 544431 3444
Q ss_pred cc--ceEEEEcCc-cchhhhhcCCCCCCCcceeeeccCCcEEEeec-C----CcEEEEcCCCc
Q 016032 289 LH--PIDFIDITT-GQLVAEVMDPNITTISPVNKLHPRDDVLASGS-S----RSIFIWRPKEK 343 (396)
Q Consensus 289 d~--~i~vwd~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d----~~i~iw~~~~~ 343 (396)
++ .++||++.. +.....+.. ...+..+ +|+|+|++|+... + ..+.+|+...+
T Consensus 401 ~~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~-~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 401 ESARESQIYAVPLQGGQPQRLSK--APGMHSA-SFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp SCTTCBEEEEEETTCCCCEECCC--SCSEEEE-EECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred CCCceEEEEEEEcCCCCeeeccc--CCCceEE-EECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 44 899999864 554555544 2445556 8999999888743 2 57889987543
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=7.7e-23 Score=193.26 Aligned_cols=294 Identities=11% Similarity=0.078 Sum_probs=186.0
Q ss_pred CccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee--eeEecCCcc-----------------cceeE
Q 016032 9 DQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE--KIVYGNIHS-----------------CIVNN 69 (396)
Q Consensus 9 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~-----------------~~v~~ 69 (396)
.+.....+..+ .+..+.|. ++. +++++.++ | +||+.+++. ...+. |. ..|.+
T Consensus 16 ~~~~~~~~~~~--~~~~~~w~--g~~-~~~~~~~~-i-~~d~~tg~~~~~~l~~--~~~~~~~l~~~~~~~~~~~~~v~~ 86 (706)
T 2z3z_A 16 GGKEFYNFYPE--YVVGLQWM--GDN-YVFIEGDD-L-VFNKANGKSAQTTRFS--AADLNALMPEGCKFQTTDAFPSFR 86 (706)
T ss_dssp --------------CTTCEEE--TTE-EEEEETTE-E-EEEC-------CEEEE--HHHHHTTC-----------CCCEE
T ss_pred Ccccccccccc--cCCCCcCc--CCe-EEEEeCCc-E-EEECCCCcEeeEEeec--hhHhhhhccchhccccccccCcee
Confidence 33334444444 35667888 434 56666777 8 999998877 44332 22 46999
Q ss_pred EEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCC--
Q 016032 70 IRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDART-- 147 (396)
Q Consensus 70 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~-- 147 (396)
++|+|+ +.++++. ++.|++||+.+++........ ..+.+++|+|+|+.|+++ .++.|++||+.+
T Consensus 87 ~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l~~~~----------~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 87 TLDAGR-GLVVLFT--QGGLVGFDMLARKVTYLFDTN----------EETASLDFSPVGDRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp EEETTT-TEEEEEE--TTEEEEEETTTTEEEEEECCT----------TCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT
T ss_pred EEECCC-CeEEEEE--CCEEEEEECCCCceEEccCCc----------ccccCCcCCCCCCEEEEE-ECCeEEEEecCccc
Confidence 999998 6555553 599999999988665433221 127788999999999985 679999999987
Q ss_pred ---CCCCccceeeecC------------CccEEEEEeccCCCCEEEEee-------------------------------
Q 016032 148 ---NSRSGEAILIHRK------------GSKVVGLHCNPIQPELLLSCG------------------------------- 181 (396)
Q Consensus 148 ---~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~~l~~~~------------------------------- 181 (396)
++..... ..... ...+.+++|+| ++++|++++
T Consensus 153 ~~~g~~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 153 EGMSRAIAVT-IDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp SCCCCCEESC-SCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccCCCcEEec-cCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 5432211 11111 01147899999 999999887
Q ss_pred --CCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC-----cEEEEEcccccccCCCcceeeccccc
Q 016032 182 --NDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN-----RLRIWDSIFGNLDSPSREIVHSHDFN 254 (396)
Q Consensus 182 --~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~ 254 (396)
.+..|++||+.+.+.........+...+.+++|+|+|+.|++++.++ .|.+||+.+++..... ... ...
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~-~~~ 306 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL---FVE-TDK 306 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE---EEE-ECS
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE---EEc-cCC
Confidence 44679999997654322221124667899999999999999887775 8999999987322111 100 011
Q ss_pred ccC-CceeEEeCC--CCCCCceeeEeeeeeeecccccccceEEEEcC-ccchhhhhcCCCCCCCcceeeeccCCcEEEee
Q 016032 255 RHL-TPFRAEWDP--KDPSESLAVIGRYISENYNGAALHPIDFIDIT-TGQLVAEVMDPNITTISPVNKLHPRDDVLASG 330 (396)
Q Consensus 255 ~~~-~~~~~~~~~--~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg 330 (396)
... ....+.|+| + |++++ ++..++.++||.+. ++..+..+..+. ..+..+.+|+|+|+.|+.+
T Consensus 307 ~~~~~~~~~~~sp~~d---------g~~l~---~~~~~g~~~l~~~~~~~~~~~~l~~~~-~~v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSN---------NQFIW---QSRRDGWNHLYLYDTTGRLIRQVTKGE-WEVTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp SCCCCCSCCEECTTCS---------SEEEE---EECTTSSCEEEEEETTSCEEEECCCSS-SCEEEEEEECTTSSEEEEE
T ss_pred CeECccCCceeecCCC---------CEEEE---EEccCCccEEEEEECCCCEEEecCCCC-eEEEeeeEEcCCCCEEEEE
Confidence 111 112468888 7 77666 56778889999876 566666665544 4454423899999887664
Q ss_pred c--CC----cEEEEcCCCcc
Q 016032 331 S--SR----SIFIWRPKEKS 344 (396)
Q Consensus 331 ~--d~----~i~iw~~~~~~ 344 (396)
+ ++ .|+.|++.+++
T Consensus 374 ~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 374 STEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp ESSSCTTCBEEEEEETTCCC
T ss_pred ecCCCCceEEEEEEEcCCCC
Confidence 4 44 67777777765
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=8.2e-23 Score=175.41 Aligned_cols=263 Identities=11% Similarity=-0.045 Sum_probs=184.6
Q ss_pred CCCCCccceeeecccc-C-CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCc----ccceeEEEEecCCCc
Q 016032 5 HVIPDQVNCAVIRYHS-R-RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIH----SCIVNNIRFNPTNDG 78 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~-~-~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~ 78 (396)
|++.+...+..+.... . .+.+++|+|++..+++++..++.|.+||+.+++....+..++ ...+..++|+|+ ++
T Consensus 16 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~ 94 (337)
T 1pby_B 16 IDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD-GK 94 (337)
T ss_dssp EETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT-SS
T ss_pred EECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCC-CC
Confidence 4555666666665322 2 588999999996566777778999999999887766554222 236789999999 88
Q ss_pred EEEEEe------------CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC
Q 016032 79 TVYAAS------------SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR 146 (396)
Q Consensus 79 ~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~ 146 (396)
+|++++ .++.|.+||+.+++....+.... .+.+++|+|++++++++ ++.|++||+.
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR----------QITMLAWARDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS----------SCCCEEECTTSSCEEEE--SSSEEEEETT
T ss_pred EEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC----------CcceeEECCCCCEEEEe--CCeEEEEECC
Confidence 888875 57999999999888776665421 16788999999988888 6899999998
Q ss_pred CCCCCccceeeecCCccEEEEEeccCCCCEEEEeeC-CC-----------------------cEEEEecCCCCCCCcccc
Q 016032 147 TNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DH-----------------------FARIWDIRRLEAGSSLCD 202 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~-----------------------~i~~wd~~~~~~~~~~~~ 202 (396)
+++..... ..... ...+.|+| ++..++..+. ++ .|.+||+.+.+.. .+..
T Consensus 163 ~~~~~~~~-~~~~~---~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~ 236 (337)
T 1pby_B 163 AGTLVEDK-PIQSW---EAETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV 236 (337)
T ss_dssp TTEEEEEE-CSTTT---TTTTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE
T ss_pred CCcEeeee-ecccc---CCCceeCC-CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec
Confidence 86543221 11111 11236788 6665544433 22 4689999875543 2222
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeee
Q 016032 203 LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISE 282 (396)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 282 (396)
..+...+.+++|+|++++|+++ ++.|.+||+.+++..... .....+..+.|+|+ |+++.
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~---------~~~~~~~~~~~s~d---------g~~l~- 295 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV---------PLPHSYYSVNVSTD---------GSTVW- 295 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE---------ECSSCCCEEEECTT---------SCEEE-
T ss_pred CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee---------cCCCceeeEEECCC---------CCEEE-
Confidence 2455678899999999999888 789999999887653211 11123457889998 66665
Q ss_pred ecccccccceEEEEcCccchhhhhcCC
Q 016032 283 NYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 283 ~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
.++.++.|.+||+.+++.+..+..+
T Consensus 296 --~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 296 --LGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp --EESBSSEEEEEETTTCCEEEEEECG
T ss_pred --EEcCCCcEEEEECcCCcEEEEEEcC
Confidence 3566899999999999888777654
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=2.3e-22 Score=197.42 Aligned_cols=288 Identities=12% Similarity=0.024 Sum_probs=203.3
Q ss_pred ccCCeEEEEec-CCCCcEEEEEeCCCcEEEeecccceeeeEecCCccc-ceeEEEEecCCCcEEEEEeCCCeEE-EEECC
Q 016032 19 HSRRVTCLEFH-PTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC-IVNNIRFNPTNDGTVYAASSDGTVS-CTDLE 95 (396)
Q Consensus 19 h~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~dg~v~-iwd~~ 95 (396)
|...|.+++|+ |+| +.|++++ ++.|.+|++.++..... ..|.. .+..++|+ + +..|++++.++.+. +|++.
T Consensus 294 ~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-d-g~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-T-KVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBEEEC--SCCSCEEEEEECSS-S-EEEEEEEETTEEEEEEEETT
T ss_pred cccccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCceEEc--cCCCcceEEeeeEc-C-CCeEEEEECCCceEEEEECC
Confidence 55679999999 999 5677776 78999999987664432 44666 89999999 8 88999988888888 99998
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
+++..... .+. ..+..++|+|+++.|++++.++.|++||+.+++... ....+...+.+++|+| +++
T Consensus 368 ~~~~~~l~-~~~---------~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~---~~~~~~~~v~~~~~Sp-DG~ 433 (1045)
T 1k32_A 368 TGKAEKFE-ENL---------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV---IERSREAMITDFTISD-NSR 433 (1045)
T ss_dssp TCCEEECC-CCC---------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEECSSSCCCCEEECT-TSC
T ss_pred CCCceEec-CCc---------cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEE---eccCCCCCccceEECC-CCC
Confidence 76543322 111 228899999999999999999999999998865432 2224555788999999 999
Q ss_pred EEEEeeCCC----------cEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 176 LLLSCGNDH----------FARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 176 ~l~~~~~d~----------~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
+|++++.++ .|++||+.+.+ ......+...+..++|+|+|++|++++.++...+|+........+..
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~ 510 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 510 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccC
Confidence 998877644 89999997643 22223577778999999999999999998888888765433211100
Q ss_pred cee-----e-------------------cccccc----------c-CCceeEEeCCCCCCCceeeEeeeeeee-------
Q 016032 246 EIV-----H-------------------SHDFNR----------H-LTPFRAEWDPKDPSESLAVIGRYISEN------- 283 (396)
Q Consensus 246 ~~~-----~-------------------~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~g~~~~~~------- 283 (396)
... . ...+.+ + .....+.++|+ |++++..
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~d---------g~~~~~~~~~g~~~ 581 (1045)
T 1k32_A 511 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES---------SILIYSVPVHGEFA 581 (1045)
T ss_dssp BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSS---------EEEEEECCCCCSHH
T ss_pred ceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCC---------CeEEEEecccCccc
Confidence 000 0 000000 0 11123556665 6544420
Q ss_pred ---cccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCCcc
Q 016032 284 ---YNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEKS 344 (396)
Q Consensus 284 ---~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~~ 344 (396)
.+......|.+||+.+++.. .+. ..+..+ +|+|||+.|++++++.|++|++.+++
T Consensus 582 ~~~~~~~~~~~l~~~d~~~~~~~-~l~----~~v~~~-~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 582 AYYQGAPEKGVLLKYDVKTRKVT-EVK----NNLTDL-RLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp HHHHCCCCCEEEEEEETTTCCEE-EEE----EEEEEE-EECTTSCEEEEEETTSCEEEEESSCT
T ss_pred ccccccCCCceEEEEECCCCcEE-Eee----cCcceE-EECCCCCEEEEEcCCcEEEEeCccCc
Confidence 12234567899999887743 222 334555 89999999999986699999998887
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=2.9e-22 Score=189.84 Aligned_cols=317 Identities=9% Similarity=0.021 Sum_probs=198.3
Q ss_pred CCCCCccceeeeccccC---CeEEEEecCCCCcEEEEEeCC---------CcEEEeecccceeeeEe-cCCcccceeEEE
Q 016032 5 HVIPDQVNCAVIRYHSR---RVTCLEFHPTNNHILLSGDKK---------GQVGVWDFYKVSEKIVY-GNIHSCIVNNIR 71 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~-~~~~~~~v~~~~ 71 (396)
|++.++.....+.+|.. .|.+++||||| ++|++++.+ +.|.+||+.++...... ..+|...+..++
T Consensus 42 ~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 42 WNVETNTSTVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAG 120 (723)
T ss_dssp BCGGGCCCEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCC
T ss_pred EECCCCcEEEEeccccccccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccE
Confidence 55666666667777765 49999999999 577877664 77889999987652221 134555689999
Q ss_pred EecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCC--CCCCc-------ceeeeEEEeCCCCCEEEEEecCC----
Q 016032 72 FNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGW--HGPRT-------WRMLYGMDINPEKGVVLVADNFG---- 138 (396)
Q Consensus 72 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~~-------~~~v~~~~~~~~~~~l~~~~~~g---- 138 (396)
|+|+ ++.|+.++. +.|++||+.+++............ .+... ...+.+++|+|+|+.|++++.++
T Consensus 121 ~SPd-G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~ 198 (723)
T 1xfd_A 121 WGPK-GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVP 198 (723)
T ss_dssp BCSS-TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSC
T ss_pred ECCC-CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccc
Confidence 9999 889998885 799999999887655443221110 00000 01137899999999999987543
Q ss_pred ------------------------------eEEEEeCCCCCCCcccee---eecCCccEEEEEeccCCCCEEEEeeC---
Q 016032 139 ------------------------------FLYLVDARTNSRSGEAIL---IHRKGSKVVGLHCNPIQPELLLSCGN--- 182 (396)
Q Consensus 139 ------------------------------~i~i~d~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~--- 182 (396)
.|++||+.++.....+.. ...+...+..++|+| +++++++.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~ 277 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQ 277 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTS
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCC
Confidence 799999988764222211 011245789999999 9988876643
Q ss_pred -CCcEEEEecCCCCCCCccccCCCCCce----eEEEEcCCCCEEEE--EeCCC------cEEEEE-cccccc--cCCCcc
Q 016032 183 -DHFARIWDIRRLEAGSSLCDLPHKRVV----NSAYFSPSGSKILT--TSQDN------RLRIWD-SIFGNL--DSPSRE 246 (396)
Q Consensus 183 -d~~i~~wd~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~~--~~~d~------~i~iwd-~~~~~~--~~~~~~ 246 (396)
+..|++||+.+++....+. ..+...+ ..++|+|+|+.|+. +..++ .|.+|| ..++.. .....
T Consensus 278 ~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~- 355 (723)
T 1xfd_A 278 NVSILTLCDATTGVCTKKHE-DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT- 355 (723)
T ss_dssp CEEEEEEEETTTCCEEEEEE-EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-
T ss_pred CeEEEEEEeCCCCcceEEEE-eccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee-
Confidence 3579999997655332221 1233333 37899999998775 44566 466677 333330 11110
Q ss_pred eeecccccccCCcee-EEeCCCCCCCceeeEeeeeeeecccccc--cceEEEEcCccc--hhhhhcCC--CCCCCcceee
Q 016032 247 IVHSHDFNRHLTPFR-AEWDPKDPSESLAVIGRYISENYNGAAL--HPIDFIDITTGQ--LVAEVMDP--NITTISPVNK 319 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~g~~d--~~i~vwd~~~~~--~~~~~~~~--~~~~i~~~~~ 319 (396)
. ....... +.|+|+ |++++. .+..+ +.++||++.... ....+... +...+..+ +
T Consensus 356 ---~----~~~~~~~~~~~spd---------g~~l~~--~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~ 416 (723)
T 1xfd_A 356 ---S----GDWDVTKILAYDEK---------GNKIYF--LSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSA-S 416 (723)
T ss_dssp ---C----SSSCEEEEEEEETT---------TTEEEE--EESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEE-E
T ss_pred ---c----CCeEEEeeeEEcCC---------CCEEEE--EEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEE-E
Confidence 0 1111112 579998 555542 23334 789999986432 23334321 22445566 8
Q ss_pred eccCCcEEEeec--CC--cEEEEcCCCccee
Q 016032 320 LHPRDDVLASGS--SR--SIFIWRPKEKSEL 346 (396)
Q Consensus 320 ~~~~~~~l~sg~--d~--~i~iw~~~~~~~~ 346 (396)
|+|+|++|+... .. ...+++..++..+
T Consensus 417 ~spdg~~l~~~~~~~~~p~~~~~~~~~~~~~ 447 (723)
T 1xfd_A 417 FSHSMDFFLLKCEGPGVPMVTVHNTTDKKKM 447 (723)
T ss_dssp ECTTSSEEEEECCSSSSCCEEEEETTTCCEE
T ss_pred ECCCCCEEEEEccCCCCCeEEEEECCCCCEE
Confidence 999999888743 22 3445565555443
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=3.3e-22 Score=196.34 Aligned_cols=296 Identities=10% Similarity=0.002 Sum_probs=206.9
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc-ceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK-VSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVS 90 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~ 90 (396)
....+.+|.+.+.++.|+++ +++++++.|+.+.||.+.. +.....+ ..|. .+..++|+|+ +..|+++. ++.|.
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l-~~~~-~~~~~~~SpD-G~~la~~~-~~~i~ 268 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKH-TSFT-DYYPRHLNTD-GRRILFSK-GGSIY 268 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEEC-CCCC-SSCEEEEEES-SSCEEEEE-TTEEE
T ss_pred CeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEe-cCCC-CcceeeEcCC-CCEEEEEe-CCEEE
Confidence 34566899999999999987 5788888899999998764 2233333 3344 4677899999 88888875 89999
Q ss_pred EEECCCCcccceeecCCCCCCC--CCcceeeeEEEeC-CCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc-cEEE
Q 016032 91 CTDLETGLALSLMNVNPNGWHG--PRTWRMLYGMDIN-PEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS-KVVG 166 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~-~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~-~i~~ 166 (396)
+|++..... ..+..+...... ..+...+.+++|+ |+|+.+++++ ++.|++|++..+... ....+.. .+..
T Consensus 269 ~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~----~~~~~~~~~~~~ 342 (1045)
T 1k32_A 269 IFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL----KVPEPLRIRYVR 342 (1045)
T ss_dssp EECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE----ECSCCSCEEEEE
T ss_pred EecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE----EccCCCcceEEe
Confidence 999954332 232221100000 0011237899999 9999998887 789999998875422 2233344 6889
Q ss_pred EEeccCCCCEEEEeeCCCcEE-EEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCc
Q 016032 167 LHCNPIQPELLLSCGNDHFAR-IWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 167 ~~~~~~~~~~l~~~~~d~~i~-~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 245 (396)
++|+ ++..|+.++.+..+. +||+...+.. .+ ..+...+..++|+|+|++|++++.++.|++||+.+++....
T Consensus 343 ~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~-~l--~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~-- 415 (1045)
T 1k32_A 343 RGGD--TKVAFIHGTREGDFLGIYDYRTGKAE-KF--EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI-- 415 (1045)
T ss_dssp ECSS--SEEEEEEEETTEEEEEEEETTTCCEE-EC--CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--
T ss_pred eeEc--CCCeEEEEECCCceEEEEECCCCCce-Ee--cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe--
Confidence 9998 788888888888888 9998754321 22 25777899999999999999999999999999998775321
Q ss_pred ceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecc-------cccccceEEEEcCccchhhhhcCCCCCCCccee
Q 016032 246 EIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYN-------GAALHPIDFIDITTGQLVAEVMDPNITTISPVN 318 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 318 (396)
.. . .......+.|+|+ |++++.... +..++.|++||+.+++ +..+..+. ..+..+
T Consensus 416 --~~--~--~~~~v~~~~~SpD---------G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~-~~~~~~- 477 (1045)
T 1k32_A 416 --ER--S--REAMITDFTISDN---------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTEN-SHDYAP- 477 (1045)
T ss_dssp --EE--C--SSSCCCCEEECTT---------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSS-SBEEEE-
T ss_pred --cc--C--CCCCccceEECCC---------CCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCC-cccCCc-
Confidence 10 1 1111236889998 666652211 1234689999999887 44555543 444555
Q ss_pred eeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 319 KLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 319 ~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
+|+|+|++|++++ ++...+|+.....
T Consensus 478 ~~spdG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 478 AFDADSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp EECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred eEcCCCCEEEEEecccCCcCcchhccc
Confidence 7999999999988 7888889876544
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=3.1e-22 Score=168.42 Aligned_cols=216 Identities=16% Similarity=0.100 Sum_probs=153.6
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccc-ceeeeEecCCc-ccceeEEEEecCCCcEEEE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK-VSEKIVYGNIH-SCIVNNIRFNPTNDGTVYA 82 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s 82 (396)
|++..+. ...+..|...|.+++|+|++ ++|++++ ++.|++||+.+ +...... ..+ ...+.+++|+|+ +.+|++
T Consensus 27 ~d~~~~~-~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~spd-g~~l~~ 101 (297)
T 2ojh_A 27 FNIRTRK-MRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVD-TGFATICNNDHGISPD-GALYAI 101 (297)
T ss_dssp EETTTTE-EEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECC-CTTCCCBCSCCEECTT-SSEEEE
T ss_pred EeCCCCc-eeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEec-cccccccccceEECCC-CCEEEE
Confidence 4455544 34567799999999999999 5777776 78999999998 6655544 334 478999999999 889988
Q ss_pred Ee--CCCeEEEE--ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEE-EEecCCeEEEEeCCCCCCCccceee
Q 016032 83 AS--SDGTVSCT--DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVL-VADNFGFLYLVDARTNSRSGEAILI 157 (396)
Q Consensus 83 ~~--~dg~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~i~d~~~~~~~~~~~~~ 157 (396)
++ .++...+| ++.++.. ..+... ..+..++|+|+++.|+ ++..++.+.+|++..... .....
T Consensus 102 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~----------~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~ 168 (297)
T 2ojh_A 102 SDKVEFGKSAIYLLPSTGGTP-RLMTKN----------LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRL 168 (297)
T ss_dssp EECTTTSSCEEEEEETTCCCC-EECCSS----------SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEEC
T ss_pred EEeCCCCcceEEEEECCCCce-EEeecC----------CCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEc
Confidence 88 33445555 4454442 222111 1177889999999887 677889899998643221 11233
Q ss_pred ecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC---------
Q 016032 158 HRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD--------- 227 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------- 227 (396)
..+...+.+++|+| ++..|+.++ .++.+++|++..... .......+...+..++|+|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 169 THGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGS-SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp CCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSS-CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred ccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCC-CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 34455799999999 888777665 589999999863211 122222466789999999999999888765
Q ss_pred --CcEEEEEcccccc
Q 016032 228 --NRLRIWDSIFGNL 240 (396)
Q Consensus 228 --~~i~iwd~~~~~~ 240 (396)
+.|.+||+.+++.
T Consensus 247 ~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEEETTSCSC
T ss_pred CceEEEEEecCCCCc
Confidence 5699999987754
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=6e-22 Score=182.84 Aligned_cols=282 Identities=12% Similarity=-0.006 Sum_probs=184.4
Q ss_pred eeecc-ccCCeEEEEecCCCCcEEEEEeC-CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC---CCe
Q 016032 14 AVIRY-HSRRVTCLEFHPTNNHILLSGDK-KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS---DGT 88 (396)
Q Consensus 14 ~~~~~-h~~~v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~ 88 (396)
+.+.. +..+|++++|+||| +.||+++. ||+++||++.++...... ..+...+..++|+|+ ..+++++. +..
T Consensus 14 ~~~~~~~~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd--~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 14 RDVERLIAVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG--RVILVRDVSKGAEQ 89 (582)
T ss_dssp HHHHHHHHSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS--EEEEEEECSTTSCC
T ss_pred HHHHHHhccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC--eEEEEeccCCCCcc
Confidence 33443 36689999999999 56777665 999999999766554433 334368999999987 67777664 455
Q ss_pred EEEEECCC--CcccceeecCCCCCCCCCcceeeeEEEeCCCCCE-EEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 89 VSCTDLET--GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGV-VLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 89 v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
..+|.+.. ......+.... .....+|+|+++. +++...++.+.+||+.+++.. ....+.. .
T Consensus 90 ~~l~~~~~~~~g~~~~l~~~~----------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~----~l~~~~~--~ 153 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQRLEAVK----------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR----ELARLPG--F 153 (582)
T ss_dssp EEEEEEETTSTTCCEECTTSC----------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE----EEEEESS--C
T ss_pred eEEEEEeccCCCccccccCCC----------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE----EeecCCC--c
Confidence 56665543 21111221111 1335577777753 334444555669999876432 1222221 7
Q ss_pred EEEeccCCCCEEEEeeCC----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC--cEEEEEccccc
Q 016032 166 GLHCNPIQPELLLSCGND----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN--RLRIWDSIFGN 239 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~ 239 (396)
+++|+| ++++|++++.+ +.|++||+.+++.. ....+...+..++|||||+.|+++..++ .|++||+.+++
T Consensus 154 ~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~---~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 154 GFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR---VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE---EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred eEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce---EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 899999 99999988877 78999998765432 2235778899999999999999888888 89999998876
Q ss_pred ccCCCcceeeccccccc--CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcce
Q 016032 240 LDSPSREIVHSHDFNRH--LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPV 317 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 317 (396)
.. .... +....... .......|+|+ |.+++ +++.++.+++|++ |+..... . ..+..+
T Consensus 230 ~~-~~~~--~~~~~~~~~~~~~~~~~~spd---------g~~~~---~~~~~g~~~l~~~--g~~~~~~---~-~~v~~~ 288 (582)
T 3o4h_A 230 VE-DLEL--PSKDFSSYRPTAITWLGYLPD---------GRLAV---VARREGRSAVFID--GERVEAP---Q-GNHGRV 288 (582)
T ss_dssp EE-ECCC--SCSHHHHHCCSEEEEEEECTT---------SCEEE---EEEETTEEEEEET--TEEECCC---S-SEEEEE
T ss_pred EE-EccC--CCcChhhhhhccccceeEcCC---------CcEEE---EEEcCCcEEEEEE--CCeeccC---C-CceEEE
Confidence 53 1110 00000000 00112339998 65555 6778899999999 6655422 1 445566
Q ss_pred eeeccCCcEEEeec-C---CcEEEEcCCC
Q 016032 318 NKLHPRDDVLASGS-S---RSIFIWRPKE 342 (396)
Q Consensus 318 ~~~~~~~~~l~sg~-d---~~i~iw~~~~ 342 (396)
+|+ +++++++++ + ..|++|+..+
T Consensus 289 -~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 289 -VLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp -EEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred -Eec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 899 999998876 5 4578888764
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=9.1e-21 Score=164.33 Aligned_cols=286 Identities=11% Similarity=0.067 Sum_probs=180.5
Q ss_pred cEEEEEe----CCCcEEEeeccc--ceeeeEecCCcccceeEEEEecCCCcEEEEEeCC----CeEEEEECCC--Ccccc
Q 016032 34 HILLSGD----KKGQVGVWDFYK--VSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD----GTVSCTDLET--GLALS 101 (396)
Q Consensus 34 ~~l~s~~----~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~--~~~~~ 101 (396)
.+++.|+ .++.|.+|.+.. +........ +...+..++|+|+ +++|++++.+ +.|.+|++.. ++...
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spd-g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSAD-GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTT-SSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCC-CCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 4566664 356899998753 433333222 6778889999999 8888888875 7999999876 33322
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-cCCeEEEEeCCCCCCCccceeee-----------cCCccEEEEEe
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-NFGFLYLVDARTNSRSGEAILIH-----------RKGSKVVGLHC 169 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~i~d~~~~~~~~~~~~~~-----------~~~~~i~~~~~ 169 (396)
........ .....+++ +++++++++ .++.|.+|++............. .....+.+++|
T Consensus 92 ~~~~~~~~-------~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 92 LNTQKTMG-------ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp EEEEECSS-------SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred eeEeccCC-------CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 22211111 12566777 777777765 67899999997644332221111 01223578999
Q ss_pred ccCCCCEEEEe-eCCCcEEEEecCCCCC------CC-----ccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcc
Q 016032 170 NPIQPELLLSC-GNDHFARIWDIRRLEA------GS-----SLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSI 236 (396)
Q Consensus 170 ~~~~~~~l~~~-~~d~~i~~wd~~~~~~------~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 236 (396)
+| ++++++++ ..++.|++|++..... .. ..........+..++|+|+|++|++++ .++.|.+|++.
T Consensus 163 sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 163 TP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp CT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred CC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 99 88866554 4588999999875332 10 111223455678999999999887777 68999999998
Q ss_pred cccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc-ccceEEEEcC--ccc--hhhhhcCCCC
Q 016032 237 FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA-LHPIDFIDIT--TGQ--LVAEVMDPNI 311 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-d~~i~vwd~~--~~~--~~~~~~~~~~ 311 (396)
++.+... ... .........+..+.|+|+ |+++.. +... ++.|.+|++. +++ .+..+.. .
T Consensus 242 ~g~~~~~-~~~--~~~~~~~~~~~~i~~spd---------g~~l~v--~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g 305 (361)
T 3scy_A 242 DGMLDEI-QTV--AADTVNAQGSGDIHLSPD---------GKYLYA--SNRLKADGVAIFKVDETNGTLTKVGYQLT--G 305 (361)
T ss_dssp TTEEEEE-EEE--ESCSSCCCCEEEEEECTT---------SSEEEE--EECSSSCEEEEEEECTTTCCEEEEEEEEC--S
T ss_pred CCceEEe-EEE--ecCCCCCCCcccEEECCC---------CCEEEE--ECCCCCCEEEEEEEcCCCCcEEEeeEecC--C
Confidence 6653210 000 001111122357889998 766641 2334 5889999985 444 3333333 2
Q ss_pred CCCcceeeeccCCcEEEeec--CCcEEEE--cCCCcceeee
Q 016032 312 TTISPVNKLHPRDDVLASGS--SRSIFIW--RPKEKSELVE 348 (396)
Q Consensus 312 ~~i~~~~~~~~~~~~l~sg~--d~~i~iw--~~~~~~~~~~ 348 (396)
..+..+ +|+|+|++|++++ ++.|.+| |..+++....
T Consensus 306 ~~~~~~-~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 306 IHPRNF-IITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp SCCCEE-EECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred CCCceE-EECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 455666 8999999888866 6899996 5556765443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=6e-21 Score=164.56 Aligned_cols=269 Identities=11% Similarity=0.128 Sum_probs=167.4
Q ss_pred eccccCCeEEEEecCCCCcEEEEEeC--CCcEEEeecccceeeeEe-cCCcccceeEEEEecCCCcEEEEEe-CCCeEEE
Q 016032 16 IRYHSRRVTCLEFHPTNNHILLSGDK--KGQVGVWDFYKVSEKIVY-GNIHSCIVNNIRFNPTNDGTVYAAS-SDGTVSC 91 (396)
Q Consensus 16 ~~~h~~~v~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~i 91 (396)
...+...+..++|+|+| ++++++.. ++.|.+|++.++...... ...+...+..++|+|+ +++|++++ .++.|.+
T Consensus 35 ~~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd-g~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 35 LLAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA-RQLVYSANYHKGTAEV 112 (347)
T ss_dssp EEEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT-TTEEEEEETTTTEEEE
T ss_pred eeeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC-CCEEEEEeCCCCEEEE
Confidence 34566778899999999 55555443 689999999766532221 1346778999999999 88787777 6899999
Q ss_pred EECCC-Ccc--cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcccee-eecCCccEEEE
Q 016032 92 TDLET-GLA--LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAIL-IHRKGSKVVGL 167 (396)
Q Consensus 92 wd~~~-~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~-~~~~~~~i~~~ 167 (396)
|++.. +.. +..+...............+.+++|+|+++++++...++.|.+|++........... ....+..+..+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 99963 322 222211111000001112378899999999666666788999999983222211111 11223357889
Q ss_pred EeccCCCCEEEE-eeCCCcEEEEecCC--CCC--CCccccCC----CCCceeEEEEcCCCCEEE-EEeCCCcEEEEEccc
Q 016032 168 HCNPIQPELLLS-CGNDHFARIWDIRR--LEA--GSSLCDLP----HKRVVNSAYFSPSGSKIL-TTSQDNRLRIWDSIF 237 (396)
Q Consensus 168 ~~~~~~~~~l~~-~~~d~~i~~wd~~~--~~~--~~~~~~~~----~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~ 237 (396)
+|+| +++++++ ...++.|.+|++.. ++. ...+.... ....+..++|+|+|++|+ +...++.|.+|++..
T Consensus 193 ~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 193 VFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 9999 8885555 56788999999874 211 01111111 124588999999999874 555689999999973
Q ss_pred ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEE--EcCccchh
Q 016032 238 GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFI--DITTGQLV 303 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vw--d~~~~~~~ 303 (396)
...... ...... ....+..++|+|+ |++++. ++..++.|.+| |..+|++.
T Consensus 272 ~g~~~~----~~~~~~-~~~~~~~~~~spd---------g~~l~v--~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DGHLTL----IQQIST-EGDFPRDFDLDPT---------EAFVVV--VNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGCEEE----EEEEEC-SSSCCCEEEECTT---------SSEEEE--EETTTTEEEEEEECTTTCCEE
T ss_pred CCcEEE----eEEEec-CCCCcCeEEECCC---------CCEEEE--EEcCCCcEEEEEEeCCCCeEE
Confidence 211110 101000 1122457889998 666552 23455889999 55566544
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=3.6e-21 Score=168.60 Aligned_cols=302 Identities=11% Similarity=0.029 Sum_probs=191.0
Q ss_pred CCccceeeeccccCCeEE-----EEecCCCCcEEEEEeC-CCc--EEEeecccceeeeEecCCcccceeEEEEecCCCcE
Q 016032 8 PDQVNCAVIRYHSRRVTC-----LEFHPTNNHILLSGDK-KGQ--VGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~-----~~~~~~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 79 (396)
.++..+..+..|...... .+|+|||. .|+.++. ++. |.+||+.+++..... .++...+..+.|+|+ ++.
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~g~~~l~~~d~~~g~~~~lt-~~~~~~~~~~~~spd-g~~ 94 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGS-KLLFGGAFDGPWNYYLLDLNTQVATQLT-EGRGDNTFGGFLSPD-DDA 94 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTCEEEECC-CSSCBCSSSCEECTT-SSE
T ss_pred CCCcceEEecCCcccccchhhcCccCCCCCC-EEEEEEcCCCCceEEEEeCCCCceEEee-eCCCCCccceEEcCC-CCE
Confidence 445667788888877776 89999995 5665555 674 888898887766554 556666667889999 899
Q ss_pred EEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe----------------------cC
Q 016032 80 VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD----------------------NF 137 (396)
Q Consensus 80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------------------~~ 137 (396)
|+.++.++.|++||+.+++.......+... .......+++++..++... .+
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~-------~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEW-------VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC 167 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTE-------EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhc-------ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence 999999999999999998876655433221 1112234589999887532 34
Q ss_pred CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC------CcEEEEecCCCCCCCccccCCCC--Cce
Q 016032 138 GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND------HFARIWDIRRLEAGSSLCDLPHK--RVV 209 (396)
Q Consensus 138 g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~--~~i 209 (396)
..|++||+.+++.. ....+...+..++|+|.++..|+.+..+ ..|.++|+..... ..+. .+. ..+
T Consensus 168 ~~l~~~d~~~g~~~----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--~~~~~~~~ 240 (388)
T 3pe7_A 168 CRLMRVDLKTGEST----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVK--THAEGESC 240 (388)
T ss_dssp EEEEEEETTTCCEE----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESC--CCCTTEEE
T ss_pred ceEEEEECCCCceE----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEee--eCCCCccc
Confidence 68999999886432 2223344688999999556666665543 3788888754322 2221 222 357
Q ss_pred eEEEEcCCCCEEEEEeC-CC----cEEEEEcccccccCCCcceeecccccc-cCCceeEEeCCCCCCCceeeEeeeeeee
Q 016032 210 NSAYFSPSGSKILTTSQ-DN----RLRIWDSIFGNLDSPSREIVHSHDFNR-HLTPFRAEWDPKDPSESLAVIGRYISEN 283 (396)
Q Consensus 210 ~~~~~~~~~~~l~~~~~-d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 283 (396)
..++|+|+|+.|+..+. ++ .|.+||+.+++... +........ ...+-...|+|+ |+.++..
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~----l~~~~~~~~~~~~~~~~~~spd---------g~~l~~~ 307 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ----LTSMPACSHLMSNYDGSLMVGD---------GSDAPVD 307 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE----EEEECCEEEEEECTTSSEEEEE---------ECCC---
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE----EEcCCCceeeeecCCCCeEccC---------CCcceeE
Confidence 88999999998865443 22 39999999886421 000000000 000001245555 6665532
Q ss_pred c------ccccccceEEEEcCccchhhhhcCCCCC----------CCcceeeeccCCcEEEeec--CCcEEEEcCC
Q 016032 284 Y------NGAALHPIDFIDITTGQLVAEVMDPNIT----------TISPVNKLHPRDDVLASGS--SRSIFIWRPK 341 (396)
Q Consensus 284 ~------~g~~d~~i~vwd~~~~~~~~~~~~~~~~----------~i~~~~~~~~~~~~l~sg~--d~~i~iw~~~ 341 (396)
. ++..+..|++||+.+++.. .+..+... .+..+ +|+|+|+.|+..+ ++...||.+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHP-SFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCC-EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eeeccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCc-cCCCCCCEEEEEecCCCceeEEEEE
Confidence 2 1255678999999887653 33333210 34555 8999999888755 6777777554
No 154
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.9e-21 Score=164.94 Aligned_cols=260 Identities=14% Similarity=0.142 Sum_probs=184.1
Q ss_pred cccceeEEEEecCCCcEEEEEeC-------CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-
Q 016032 63 HSCIVNNIRFNPTNDGTVYAASS-------DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA- 134 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 134 (396)
....+..++|+|+ ++.+++++. ++.|.+||..+++....+..... +..++|+|++++++++
T Consensus 39 ~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----------~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 39 VGKGAYEMAYSQQ-ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK----------PFGATINNTTQTLWFGN 107 (353)
T ss_dssp EESSEEEEEEETT-TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC----------CCSEEEETTTTEEEEEE
T ss_pred hccCccceEECCC-CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC----------cceEEECCCCCEEEEEe
Confidence 4566889999999 777777663 56899999999988877765322 6778999999966555
Q ss_pred ecCCeEEEEeCCCCCCCccceeeecC------CccEEEEEeccCCCCEEEEee--CCCcEEEEecCCCCCCCccccCCCC
Q 016032 135 DNFGFLYLVDARTNSRSGEAILIHRK------GSKVVGLHCNPIQPELLLSCG--NDHFARIWDIRRLEAGSSLCDLPHK 206 (396)
Q Consensus 135 ~~~g~i~i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~ 206 (396)
..++.|.+||+.+++........... ...+.+++|+| +++.+++++ .++.|.+||+.+.+....+. .+.
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~ 184 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQ--NTG 184 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEEC--CCC
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEec--CCC
Confidence 55789999999987654322111110 01278899999 888766665 47889999997654433322 144
Q ss_pred CceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccc
Q 016032 207 RVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNG 286 (396)
Q Consensus 207 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 286 (396)
..+..++|+|++++|++++.++.|.+||+.+++...... .........+..+.|+|+ |+++.. +.
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~s~d---------g~~l~~--~~ 249 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK----LLDDGKEHFFINISLDTA---------RQRAFI--TD 249 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE----CCCSSSCCCEEEEEEETT---------TTEEEE--EE
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE----cCCCCCCcccceEEECCC---------CCEEEE--Ee
Confidence 557889999999999999999999999999877543111 101111122345788888 444331 34
Q ss_pred ccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEe-ec-CCcEEEEcCCCcceeeeccccceE
Q 016032 287 AALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS-GS-SRSIFIWRPKEKSELVEQKEEMKI 355 (396)
Q Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s-g~-d~~i~iw~~~~~~~~~~~~~~~~~ 355 (396)
..++.|.+||+.+++.+..+..+.. ..+ +|+|+|++++. .. ++.|.+||+.+++.+..+.....+
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~~~~---~~~-~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 316 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAAPES---LAV-LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHP 316 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSC---CCE-EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEE
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCC---ceE-EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCC
Confidence 4568999999999988877765432 345 79999985554 54 899999999999988877665543
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=3.8e-21 Score=182.04 Aligned_cols=286 Identities=11% Similarity=0.017 Sum_probs=184.5
Q ss_pred EEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCccc---ceeEEEEecCCCcEEEEEeC---------CCeEEE
Q 016032 24 TCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC---IVNNIRFNPTNDGTVYAASS---------DGTVSC 91 (396)
Q Consensus 24 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~---------dg~v~i 91 (396)
.+++|+|++ ++++++ .|+.|++||+.++.....+ ..|.. .+.+++|+|+ +++|++++. ++.|++
T Consensus 19 ~~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~SpD-g~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 19 FFPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYTIL-SNRTMKSVNASNYGLSPD-RQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCCEESSSS-EEEEEC-TTSCEEEEESSSCCEEEEE-CHHHHHTTTCSEEEECTT-SSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEEEE-ccccccccceeeEEECCC-CCeEEEEecCceeEEeecceEEEE
Confidence 378999999 666655 5999999999998876665 33433 3999999999 899888876 689999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc---------
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS--------- 162 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~--------- 162 (396)
||+.+++.+...... ..+..++|+|+|+.|+++. ++.|++|++.++..... ....+..
T Consensus 95 ~d~~~g~~~~~~~l~----------~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l--~~~~~~~~v~~g~~~~ 161 (719)
T 1z68_A 95 YDLSNGEFVRGNELP----------RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI--TFNGRENKIFNGIPDW 161 (719)
T ss_dssp EETTTTEECCSSCCC----------SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC--CCCCBTTTEEESSCCH
T ss_pred EECCCCccccceecC----------cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE--ecCCCcCCeEcccccc
Confidence 999998763211111 1278899999999999885 78999999987654321 1111111
Q ss_pred --------cEEEEEeccCCCCEEEEeeCCC----------------------------------cEEEEecCCCCCC--C
Q 016032 163 --------KVVGLHCNPIQPELLLSCGNDH----------------------------------FARIWDIRRLEAG--S 198 (396)
Q Consensus 163 --------~i~~~~~~~~~~~~l~~~~~d~----------------------------------~i~~wd~~~~~~~--~ 198 (396)
...+++|+| +++.|++++.|. .|++||+.+.+.. .
T Consensus 162 v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 162 VYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred eeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence 124899999 999999887652 7889999764421 0
Q ss_pred ccc----cCCCCCceeEEEEcCCCCEEEEEeCC----CcEEEEE----cccccccCCCcceeecccccccCC---ceeEE
Q 016032 199 SLC----DLPHKRVVNSAYFSPSGSKILTTSQD----NRLRIWD----SIFGNLDSPSREIVHSHDFNRHLT---PFRAE 263 (396)
Q Consensus 199 ~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 263 (396)
.+. ...+...+..++|+|+++++++.... ..|.+|| +.+++........ ......... .....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~ 318 (719)
T 1z68_A 241 EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHI--EESRTGWAGGFFVSTPV 318 (719)
T ss_dssp ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEE--EECSSSCSSSSSCCCCE
T ss_pred EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecc--cccCCceEccccCCccE
Confidence 110 11477789999999998877764432 2488899 7777653221000 001111111 11467
Q ss_pred eCCCCCCCceeeEeeeeeee-cccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-C-----CcEE
Q 016032 264 WDPKDPSESLAVIGRYISEN-YNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-S-----RSIF 336 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~-~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d-----~~i~ 336 (396)
|+|+ |+.++.. ........|.+||+.+++ ...+..+. ..+..+ .++ +++.|+..+ + +.++
T Consensus 319 ~spd---------g~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~-~~v~~~-~~~-d~~~i~~~~~~~~~~~~~~~ 385 (719)
T 1z68_A 319 FSYD---------AISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGK-WEAINI-FRV-TQDSLFYSSNEFEEYPGRRN 385 (719)
T ss_dssp ECTT---------SSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSS-SCEEEE-EEE-CSSEEEEEESCGGGCTTCBE
T ss_pred ECCC---------CCeEEEEEEccCCceEEEEEECCCCc-eEecccCc-eEEEEE-EEE-eCCEEEEEEecCCCCCceEE
Confidence 9998 4433211 112334568888887766 33444333 344455 344 666666544 5 7888
Q ss_pred EEcCCC
Q 016032 337 IWRPKE 342 (396)
Q Consensus 337 iw~~~~ 342 (396)
+|.+..
T Consensus 386 l~~~~~ 391 (719)
T 1z68_A 386 IYRISI 391 (719)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998754
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=2.4e-19 Score=155.33 Aligned_cols=276 Identities=14% Similarity=0.108 Sum_probs=169.9
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCC----CcEEEeecccc--eeeeEe-cCCcccceeEEEEecCCCcEEEEEe-CCCeEE
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKK----GQVGVWDFYKV--SEKIVY-GNIHSCIVNNIRFNPTNDGTVYAAS-SDGTVS 90 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~--~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~v~ 90 (396)
|...+..++|+|++ ++|++++.+ +.|.+|++... ...... ...+......+++ + +++|++++ .++.|.
T Consensus 48 ~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d-g~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N-GKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C-SSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C-CCEEEEEECCCCEEE
Confidence 67788899999999 567777765 79999998763 322211 1234556777777 5 66666665 688999
Q ss_pred EEECCCCcccceee----cCCCC-CCCCCcceeeeEEEeCCCCCEEEEEe-cCCeEEEEeCCCCCC------Ccc----c
Q 016032 91 CTDLETGLALSLMN----VNPNG-WHGPRTWRMLYGMDINPEKGVVLVAD-NFGFLYLVDARTNSR------SGE----A 154 (396)
Q Consensus 91 iwd~~~~~~~~~~~----~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~i~d~~~~~~------~~~----~ 154 (396)
+|++.....+..+. ..... .........+.+++|+|+++++++++ .++.|.+|++..... ... .
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 99997644332211 11000 00001112268899999999776655 578999999876442 111 1
Q ss_pred eeeecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCCC--CccccC-CCCCceeEEEEcCCCCEEEEEeCC--C
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEAG--SSLCDL-PHKRVVNSAYFSPSGSKILTTSQD--N 228 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--~ 228 (396)
.........+..++|+| +++++++++ .++.|.+|++.+.... ..+... .+...+..++|+|+|++|+++..+ +
T Consensus 204 ~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred ceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 11223344678999999 898777666 6899999999754321 111111 233456899999999998776654 8
Q ss_pred cEEEEEcc--cccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEE--EcCccchhh
Q 016032 229 RLRIWDSI--FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFI--DITTGQLVA 304 (396)
Q Consensus 229 ~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vw--d~~~~~~~~ 304 (396)
.|.+|++. +++... ..... ....+..++|+|+ |++++. ++..++.|.+| |..++++..
T Consensus 283 ~i~v~~~~~~~g~~~~-----~~~~~--~g~~~~~~~~spd---------g~~l~~--~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 283 GVAIFKVDETNGTLTK-----VGYQL--TGIHPRNFIITPN---------GKYLLV--ACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEEEECTTTCCEEE-----EEEEE--CSSCCCEEEECTT---------SCEEEE--EETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEEEcCCCCcEEE-----eeEec--CCCCCceEEECCC---------CCEEEE--EECCCCCEEEEEEECCCCcEee
Confidence 99999996 333211 00111 1223457899998 766652 23366889996 455676544
Q ss_pred hhcCCCCCCCcce
Q 016032 305 EVMDPNITTISPV 317 (396)
Q Consensus 305 ~~~~~~~~~i~~~ 317 (396)
.....+.....++
T Consensus 345 ~~~~~~~~~p~~v 357 (361)
T 3scy_A 345 IKKDIKVDKPVCL 357 (361)
T ss_dssp CSCCEECSSEEEE
T ss_pred cceeeeCCCCeEE
Confidence 3322222344444
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.4e-21 Score=169.49 Aligned_cols=207 Identities=10% Similarity=0.045 Sum_probs=147.9
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee----------eeE----ecCCcccceeEEEEecCCCcEEE---
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE----------KIV----YGNIHSCIVNNIRFNPTNDGTVY--- 81 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----------~~~----~~~~~~~~v~~~~~~~~~~~~l~--- 81 (396)
+...++.+++++++ .++++++.++ ++||+...... ... ....+...|.+++|+|+ +.+|+
T Consensus 35 ~~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~lav~~ 111 (434)
T 2oit_A 35 PKERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCD-NLTLSACM 111 (434)
T ss_dssp CCSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTT-SCEEEEEE
T ss_pred CCCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCC-CCEEEEEE
Confidence 34468999999998 5788888887 89987643111 000 00125668999999999 88888
Q ss_pred -EEeCCCeEEEEECCCC--------cccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCC
Q 016032 82 -AASSDGTVSCTDLETG--------LALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRS 151 (396)
Q Consensus 82 -s~~~dg~v~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~ 151 (396)
+++.|+.|++||+.++ +.+..+... .+ +...|.+++|+|+ +.+|++++.||.|++||++++...
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~----~~--h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL----KD--AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECC----CS--GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeecc----CC--CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce
Confidence 7888999999998765 111112111 11 2234999999998 899999999999999999986332
Q ss_pred ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-----CCCCceeEEEEcCCCCEEEEE-e
Q 016032 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-----PHKRVVNSAYFSPSGSKILTT-S 225 (396)
Q Consensus 152 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~-~ 225 (396)
.....+...+.+++|+| ++.+|++|+.||.|++||++ .+....+... .|...|.+++|++++.++++. +
T Consensus 186 ---~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~ 260 (434)
T 2oit_A 186 ---CATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA 260 (434)
T ss_dssp ---EEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred ---eeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc
Confidence 22333556899999999 89999999999999999997 2222222111 233489999999988877543 3
Q ss_pred CCC------cEEEEEccccc
Q 016032 226 QDN------RLRIWDSIFGN 239 (396)
Q Consensus 226 ~d~------~i~iwd~~~~~ 239 (396)
.+| .+++|+++...
T Consensus 261 ~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 261 ADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TTCCSSSCCEEEEEECCCTT
T ss_pred CCCccCCCCceEEEEeccCC
Confidence 443 38999998653
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=4.5e-20 Score=160.02 Aligned_cols=285 Identities=12% Similarity=0.090 Sum_probs=176.2
Q ss_pred EEEEEeCC--CcEEEeecc--cceeeeEec--CCcccceeEEEEecCCCcEEEEEeCCCeEEEEECC-CCcccceeecCC
Q 016032 35 ILLSGDKK--GQVGVWDFY--KVSEKIVYG--NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLE-TGLALSLMNVNP 107 (396)
Q Consensus 35 ~l~s~~~d--g~i~iwd~~--~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~ 107 (396)
.|+.|+.. +.|.+|++. ++....... ......+..++|+|+ +++|++++.+ .|.+|++. +++.........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spd-g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE-RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT-SSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCC-CCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 35556553 468887764 343322211 123446889999999 8888888877 99999997 676543332211
Q ss_pred CCCCCCCcceeeeEEEeCCCCCE--EEEEe-------------cCCeEEEEeCCC-CCCCccceee--ecCCccEEEEEe
Q 016032 108 NGWHGPRTWRMLYGMDINPEKGV--VLVAD-------------NFGFLYLVDART-NSRSGEAILI--HRKGSKVVGLHC 169 (396)
Q Consensus 108 ~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-------------~~g~i~i~d~~~-~~~~~~~~~~--~~~~~~i~~~~~ 169 (396)
.. .+.+++|+|++++ ++++. .+|.+.+|++.. +... ..... +.+...+.+++|
T Consensus 82 ~g--------~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 152 (365)
T 1jof_A 82 GG--------HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLE-KNVQNYEYQENTGIHGMVF 152 (365)
T ss_dssp CS--------SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEE-EEEEEEECCTTCCEEEEEE
T ss_pred CC--------CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCc-ceEeeEEeCCCCcceEEEE
Confidence 11 1445889999995 44443 688999999974 3322 11121 123457899999
Q ss_pred ccCCCCEEEEee-CCCcEEEEecC-CCCCCCccccC---CCCCceeEEEEcCCCCEEEEEeC-CCcEEEEEcc--ccccc
Q 016032 170 NPIQPELLLSCG-NDHFARIWDIR-RLEAGSSLCDL---PHKRVVNSAYFSPSGSKILTTSQ-DNRLRIWDSI--FGNLD 241 (396)
Q Consensus 170 ~~~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~ 241 (396)
+| ++++++++. .++.|++|++. +++.. .+... .+...+..++|+|+|++|++++. ++.|.+|++. ++++.
T Consensus 153 sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 153 DP-TETYLYSADLTANKLWTHRKLASGEVE-LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp CT-TSSEEEEEETTTTEEEEEEECTTSCEE-EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CC-CCCEEEEEcCCCCEEEEEEECCCCCEE-EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 99 898877765 46799999997 43321 11111 13566899999999999988775 6899999875 44431
Q ss_pred CCCccee-ecccccccC-------CceeEE-eCCCCCCCceeeEeeeeeeeccccc---ccceEEEEcC-ccchhhh---
Q 016032 242 SPSREIV-HSHDFNRHL-------TPFRAE-WDPKDPSESLAVIGRYISENYNGAA---LHPIDFIDIT-TGQLVAE--- 305 (396)
Q Consensus 242 ~~~~~~~-~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~---d~~i~vwd~~-~~~~~~~--- 305 (396)
.....+. ....+.++. .+..+. |+|+ |+++.....+.. .+.|.+|++. ++++...
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd---------G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~ 301 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS---------GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL 301 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT---------SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCC---------CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee
Confidence 1000000 011111112 345788 9998 665542111111 1289999996 5654331
Q ss_pred hcCCCCCCCcceeeecc---CCcEEEeec--CCcEEEEcCCCc
Q 016032 306 VMDPNITTISPVNKLHP---RDDVLASGS--SRSIFIWRPKEK 343 (396)
Q Consensus 306 ~~~~~~~~i~~~~~~~~---~~~~l~sg~--d~~i~iw~~~~~ 343 (396)
+..+ ......+ +|+| +|++|++++ ++.|.+|+++..
T Consensus 302 ~~~~-~~~~~~~-a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 302 SPTP-TSGGHSN-AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECS-SCCTTCC-CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecC-CCCcccc-eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2122 2344556 7999 899999887 499999998765
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2e-20 Score=177.16 Aligned_cols=316 Identities=8% Similarity=0.035 Sum_probs=191.0
Q ss_pred CCCCCccceeeeccccC---CeEEEEecCCCCcEEEEEeC---------CCcEEEeecccceeeeEecCCcccceeEEEE
Q 016032 5 HVIPDQVNCAVIRYHSR---RVTCLEFHPTNNHILLSGDK---------KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRF 72 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 72 (396)
|++..+.....+.+|.. .|.+++||||| ++|++++. ++.|++||+.+++...... ....+..++|
T Consensus 41 ~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~--l~~~~~~~~~ 117 (719)
T 1z68_A 41 YNIETGQSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE--LPRPIQYLCW 117 (719)
T ss_dssp EESSSCCEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC--CCSSBCCEEE
T ss_pred EEcCCCcEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCcccccee--cCcccccceE
Confidence 55566666566666654 49999999999 56777765 6899999999887621111 1246889999
Q ss_pred ecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCC--CCCCCcc-------eeeeEEEeCCCCCEEEEEecCC-----
Q 016032 73 NPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNG--WHGPRTW-------RMLYGMDINPEKGVVLVADNFG----- 138 (396)
Q Consensus 73 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~g----- 138 (396)
+|+ ++.|+.+. ++.|++|++.+++........... ..+...+ ....+++|+|||+.|++++.+.
T Consensus 118 SPD-G~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~ 195 (719)
T 1z68_A 118 SPV-GSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPV 195 (719)
T ss_dssp CSS-TTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCE
T ss_pred CCC-CCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCce
Confidence 999 88888886 789999999988764332111000 0000000 1125899999999999987552
Q ss_pred -----------------------------eEEEEeCCCCCCC--ccc---eeeecCCccEEEEEeccCCCCEEEEeeCC-
Q 016032 139 -----------------------------FLYLVDARTNSRS--GEA---ILIHRKGSKVVGLHCNPIQPELLLSCGND- 183 (396)
Q Consensus 139 -----------------------------~i~i~d~~~~~~~--~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~d- 183 (396)
.|++||+.++... ..+ .....+...+..++|+| ++.++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~ 274 (719)
T 1z68_A 196 IAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRV 274 (719)
T ss_dssp EEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESS
T ss_pred EEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccc
Confidence 7889999876531 011 01123555789999999 77777764432
Q ss_pred ---CcEEEEe----cCCCCCCCccc--cCCCCCcee-----EEEEcCCCCEEEE--EeCCC--cEEEEEcccccccCCCc
Q 016032 184 ---HFARIWD----IRRLEAGSSLC--DLPHKRVVN-----SAYFSPSGSKILT--TSQDN--RLRIWDSIFGNLDSPSR 245 (396)
Q Consensus 184 ---~~i~~wd----~~~~~~~~~~~--~~~~~~~i~-----~~~~~~~~~~l~~--~~~d~--~i~iwd~~~~~~~~~~~ 245 (396)
..|++|| +.+++....+. ...+...+. .+.|+|+|+.|+. +..+| .|.+||+.+++...
T Consensus 275 ~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~--- 351 (719)
T 1z68_A 275 QNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQ--- 351 (719)
T ss_dssp TTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEE---
T ss_pred cCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEe---
Confidence 2488899 76654433331 024555665 7899999996654 44555 46667776554211
Q ss_pred ceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc----ccceEEEEcCc--cch-hhhhcC---CCCCCCc
Q 016032 246 EIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA----LHPIDFIDITT--GQL-VAEVMD---PNITTIS 315 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~----d~~i~vwd~~~--~~~-~~~~~~---~~~~~i~ 315 (396)
+.... .....+.+. + |+.++. ++.. ++.+++|.+.. +.. ...+.. .+...+.
T Consensus 352 --lt~~~----~~v~~~~~~-d---------~~~i~~--~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~ 413 (719)
T 1z68_A 352 --ITSGK----WEAINIFRV-T---------QDSLFY--SSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYY 413 (719)
T ss_dssp --CSCSS----SCEEEEEEE-C---------SSEEEE--EESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBE
T ss_pred --cccCc----eEEEEEEEE-e---------CCEEEE--EEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceE
Confidence 11100 011122333 2 333331 2222 57788887653 321 122221 1213444
Q ss_pred ceeeeccCCcEEEe-ec-C--CcEEEEcCCCcceeee
Q 016032 316 PVNKLHPRDDVLAS-GS-S--RSIFIWRPKEKSELVE 348 (396)
Q Consensus 316 ~~~~~~~~~~~l~s-g~-d--~~i~iw~~~~~~~~~~ 348 (396)
.+ .|+|++++++. ++ + ..+.+|++.+++.+..
T Consensus 414 ~~-~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~ 449 (719)
T 1z68_A 414 TA-SFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKI 449 (719)
T ss_dssp EE-EECGGGSSEEEEECCBSSCEEEEECSSSCCEEEE
T ss_pred EE-EECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEE
Confidence 45 79999987764 33 2 6789999988875433
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.8e-20 Score=165.54 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=141.9
Q ss_pred cccCCeEEEEecCCCCcEEE----EEeCCCcEEEeecccc-----ee---e--eEecCCcccceeEEEEecCCCcEEEEE
Q 016032 18 YHSRRVTCLEFHPTNNHILL----SGDKKGQVGVWDFYKV-----SE---K--IVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~----s~~~dg~i~iwd~~~~-----~~---~--~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.|.+.|++++|+|++ ++|+ +|+.|+.|+|||+.+. .. . .....+|...|.+++|+|+.+.+|+++
T Consensus 90 ~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 90 PMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred cCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 366789999999999 5677 8889999999999765 11 1 233367999999999999867899999
Q ss_pred eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeee-----
Q 016032 84 SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIH----- 158 (396)
Q Consensus 84 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~----- 158 (396)
+.||+|++||++++........+. ..+.+++|+|++++|++|+.||.|++||++ +..... ...+
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~---------~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~-~~~~~~~~~ 237 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPST---------VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKV-IPCPPFYES 237 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGG---------GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEE-ECCCTTCCT
T ss_pred ECCCeEEEEEcCCCcceeeccCCC---------CceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccc-ccCCcccCC
Confidence 999999999999885543332211 239999999999999999999999999998 322111 1111
Q ss_pred cCCccEEEEEeccCCCCEEEE-eeCCC------cEEEEecCCCCCC--CccccC--------CCCCceeEEEEcCCCCEE
Q 016032 159 RKGSKVVGLHCNPIQPELLLS-CGNDH------FARIWDIRRLEAG--SSLCDL--------PHKRVVNSAYFSPSGSKI 221 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~l~~-~~~d~------~i~~wd~~~~~~~--~~~~~~--------~~~~~i~~~~~~~~~~~l 221 (396)
.+...+.+++|++ +..++++ ...+| .+++|+++..+.. ..+..+ ....+...+.+-++.+++
T Consensus 238 ~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~ 316 (434)
T 2oit_A 238 DHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLV 316 (434)
T ss_dssp TSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEE
T ss_pred CCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEE
Confidence 1233799999999 6666644 33343 3899999864321 111111 112223334444677777
Q ss_pred EEEeC-CCcEEEEEcc
Q 016032 222 LTTSQ-DNRLRIWDSI 236 (396)
Q Consensus 222 ~~~~~-d~~i~iwd~~ 236 (396)
++++. .+.|.++...
T Consensus 317 ~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 317 LAASAASTEVSILARQ 332 (434)
T ss_dssp EEEETTCSBCEEEEEC
T ss_pred EEecCCCCceeEEEec
Confidence 66554 4557777643
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=4e-19 Score=153.15 Aligned_cols=258 Identities=14% Similarity=0.115 Sum_probs=169.6
Q ss_pred CCCCCccceeeecccc-CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCc-----ccceeEEEEecCCCc
Q 016032 5 HVIPDQVNCAVIRYHS-RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIH-----SCIVNNIRFNPTNDG 78 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~ 78 (396)
|+..++..+..+..+. ..+..++|+|++..+++++..++.|.+||+.+++....+...+ ...+..++|+|+ ++
T Consensus 26 ~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~ 104 (349)
T 1jmx_B 26 VDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD-GK 104 (349)
T ss_dssp EETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT-SS
T ss_pred EECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC-CC
Confidence 5556666666666543 2578999999995556677778999999999887766553223 334889999999 88
Q ss_pred EEEEEeCC------------CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC
Q 016032 79 TVYAASSD------------GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR 146 (396)
Q Consensus 79 ~l~s~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~ 146 (396)
+|++++.+ +.|.+||+.+++....+...... ..+.+++|+|+++ +++++ +.|.+||+.
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~-l~~~~--~~i~~~d~~ 174 (349)
T 1jmx_B 105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-------RQVYLMRAADDGS-LYVAG--PDIYKMDVK 174 (349)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-------SSCCCEEECTTSC-EEEES--SSEEEECTT
T ss_pred EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-------CcccceeECCCCc-EEEcc--CcEEEEeCC
Confidence 88888755 89999999886543322211110 1278899999999 55554 449999998
Q ss_pred CCCCCccceeeec------------------CC----ccEEEEEeccCCCC-----------EEEEeeCCCcEEEEecCC
Q 016032 147 TNSRSGEAILIHR------------------KG----SKVVGLHCNPIQPE-----------LLLSCGNDHFARIWDIRR 193 (396)
Q Consensus 147 ~~~~~~~~~~~~~------------------~~----~~i~~~~~~~~~~~-----------~l~~~~~d~~i~~wd~~~ 193 (396)
+++..... .... .. .....+++++ ++. ++......+.+++|++.
T Consensus 175 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (349)
T 1jmx_B 175 TGKYTVAL-PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-DDKQDPATADLLYGYLSVDLKTGKTHTQEFA- 251 (349)
T ss_dssp TCCEEEEE-CSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEEEEEEEEETTTCCEEEEEEE-
T ss_pred CCceeccc-cccccCCccccCccceeeecCCCcceeEEeeeeeeecC-CCcCCccccccceeEEEEeccCCcEEecccc-
Confidence 86543221 1110 00 0233455554 221 12233344556665552
Q ss_pred CCCCCccccCCCCCceeEEEEcC-CCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCc
Q 016032 194 LEAGSSLCDLPHKRVVNSAYFSP-SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSES 272 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (396)
.+...+..++|+| ++++|+++ ++.|.+||+.+++...... ....+..+.|+|+
T Consensus 252 ----------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---------~~~~~~~~~~s~d----- 305 (349)
T 1jmx_B 252 ----------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---------LDHTYYCVAFDKK----- 305 (349)
T ss_dssp ----------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---------CSSCCCEEEECSS-----
T ss_pred ----------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---------CCCCccceEECCC-----
Confidence 1345678999999 99999888 8899999999876532111 1112347889998
Q ss_pred eeeEeeeeeeecccccccceEEEEcCccchhhhhcCC
Q 016032 273 LAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 273 ~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
|++++ .++.++.|.+||+.+++.+..+..+
T Consensus 306 ----g~~l~---~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 306 ----GDKLY---LGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ----SSCEE---EESBSSEEEEEETTTTEEEEEEECS
T ss_pred ----CCEEE---EecCCCeEEEEeccccceeeeeecC
Confidence 66555 3466799999999999888777654
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=6.8e-20 Score=160.89 Aligned_cols=306 Identities=12% Similarity=0.059 Sum_probs=184.3
Q ss_pred CCCccceeeeccccCC-----eEEEEecCCCCcEEEEEeCC--CcEEEeecccceeeeEecCCcccceeEEEEecCCCcE
Q 016032 7 IPDQVNCAVIRYHSRR-----VTCLEFHPTNNHILLSGDKK--GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGT 79 (396)
Q Consensus 7 ~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 79 (396)
..++..+..+..+... +.+++|+|+|..++++...+ ..|.+||+.+++..... .++......+.|+|+ ++.
T Consensus 17 ~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~spd-g~~ 94 (396)
T 3c5m_A 17 SDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-EGKGDNTFGGFISTD-ERA 94 (396)
T ss_dssp TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-CSSCBCTTTCEECTT-SSE
T ss_pred CCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-cCCCCccccceECCC-CCE
Confidence 3455556666665444 78899999995444444433 36888898887654443 333333334889999 899
Q ss_pred EEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeee-------------EEEeCCCCCEEEEE-----ecCCeEE
Q 016032 80 VYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY-------------GMDINPEKGVVLVA-----DNFGFLY 141 (396)
Q Consensus 80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~-------------~~~~~~~~~~l~~~-----~~~g~i~ 141 (396)
|+.++.++.|.+|++.+++.......+.. ..... ..+. .+.|+|+++.++.. ..+..|+
T Consensus 95 l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~g--~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 95 FFYVKNELNLMKVDLETLEEQVIYTVDEE-WKGYG--TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTT-EEEEE--EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred EEEEEcCCcEEEEECCCCCcEEEEecccc-cCCCC--CEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE
Confidence 99999899999999998876554443221 00000 0000 03567888776654 3556899
Q ss_pred EEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC------CcEEEEecCCCCCCCccccCCCCCceeEEEEc
Q 016032 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND------HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFS 215 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~ 215 (396)
+||+.+++.. ........+..+.|+|.++..|+..+.+ ..|.+||+..... ..+........+..++|+
T Consensus 172 ~~d~~~g~~~----~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 172 KVDIETGELE----VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EEETTTCCEE----EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEEC
T ss_pred EEECCCCcEE----eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEEC
Confidence 9999876532 1223344688999998445656555443 3688888864332 122110113357889999
Q ss_pred CCCCEEEEEeCC-----CcEEEEEcccccccCCCcceeecccccccCCceeEEeCC-CCCCCceeeEeeeeeeec-----
Q 016032 216 PSGSKILTTSQD-----NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDP-KDPSESLAVIGRYISENY----- 284 (396)
Q Consensus 216 ~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~----- 284 (396)
|+|+.|+.++.+ +.|.+||+.+++... +. .... ....|+| + |++++...
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~----l~---~~~~----~~~~~s~~d---------g~~l~~~~~~~p~ 306 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEE----VM---VMPP----CSHLMSNFD---------GSLMVGDGCDAPV 306 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEE----EE---ECCS----EEEEEECSS---------SSEEEEEECCC--
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEE----ee---eCCC----CCCCccCCC---------CceEEEecCCcce
Confidence 999988777544 449999998776421 11 0111 1267888 6 44443211
Q ss_pred --------ccccccceEEEEcCccchhhhhcCCCCC----------CCcceeeeccCCcEEEeec--CCcEEEE--cCCC
Q 016032 285 --------NGAALHPIDFIDITTGQLVAEVMDPNIT----------TISPVNKLHPRDDVLASGS--SRSIFIW--RPKE 342 (396)
Q Consensus 285 --------~g~~d~~i~vwd~~~~~~~~~~~~~~~~----------~i~~~~~~~~~~~~l~sg~--d~~i~iw--~~~~ 342 (396)
....+..|++||+.+++.. .+..+... ....+ +|+|+|+.|+.++ ++...|| ++.+
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHP-SFTPNDDGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp --------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCC-EECTTSSEEEEEECTTSSCEEEEEECCT
T ss_pred eeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCc-eEccCCCeEEEEecCCCCceEEEEEEcc
Confidence 0124578999999887753 34333211 13344 7999999888765 4555555 4455
Q ss_pred cc
Q 016032 343 KS 344 (396)
Q Consensus 343 ~~ 344 (396)
++
T Consensus 385 ~~ 386 (396)
T 3c5m_A 385 SY 386 (396)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1e-18 Score=165.57 Aligned_cols=276 Identities=9% Similarity=0.013 Sum_probs=174.2
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccc-----eeEEEEecCCCcEEEEEeCC--------
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCI-----VNNIRFNPTNDGTVYAASSD-------- 86 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~s~~~d-------- 86 (396)
.....+++|+|++ .+|+++ |+.|++||+.++.....+ .+|... ...+.|+|+ +++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Spd-g~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFL-ENSTFDEFGHSINDYSISPD-GQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEE-CTTTTTTCCSCCCEEEECTT-SSEEEEEEEEEECSSSCE
T ss_pred cccccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEE-echhhhhhcccccceEECCC-CCEEEEEECCeeeEEEcc
Confidence 3446789999999 688886 899999999998876655 445432 244889999 8998888865
Q ss_pred -CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc---
Q 016032 87 -GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS--- 162 (396)
Q Consensus 87 -g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~--- 162 (396)
+.+.+||+.+++..... ... ..+...+|||||+.|+.+. ++.|++|++.++..... ....+..
T Consensus 91 ~~~~~~~d~~~~~~~~l~-~~~---------~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~l--t~~g~~~~~~ 157 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEE-RIP---------NNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI--TWTGKEDIIY 157 (740)
T ss_dssp EEEEEEEETTTTEECCSS-CCC---------TTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC--CSCCBTTTEE
T ss_pred ceEEEEEECCCCcEEEcc-cCC---------CcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEE--cCCCCcccee
Confidence 56779999998765422 111 1288999999999998884 68999999987653211 1111111
Q ss_pred --------------cEEEEEeccCCCCEEEEeeCCC------------------------------------cEEEEecC
Q 016032 163 --------------KVVGLHCNPIQPELLLSCGNDH------------------------------------FARIWDIR 192 (396)
Q Consensus 163 --------------~i~~~~~~~~~~~~l~~~~~d~------------------------------------~i~~wd~~ 192 (396)
....+.|+| +++.|+.++.|. .|++||+.
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred cCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 123589999 999988875321 47888887
Q ss_pred C---CCCCCccccC------CCCCceeEEEEcCCCCEEEEEeC----CCcEEEEEccccc----ccCCCcceeecccccc
Q 016032 193 R---LEAGSSLCDL------PHKRVVNSAYFSPSGSKILTTSQ----DNRLRIWDSIFGN----LDSPSREIVHSHDFNR 255 (396)
Q Consensus 193 ~---~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~ 255 (396)
+ .+........ ++...+..++|+|+|+.++.... +..|.+||+.+++ +..... .. ......
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~-l~-~~~~~~ 314 (740)
T 4a5s_A 237 SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQ-HI-EMSTTG 314 (740)
T ss_dssp SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGC-EE-EECSSS
T ss_pred CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEE-ee-eccCCc
Confidence 6 4211111111 26777999999999997665533 3479999999887 221111 10 011111
Q ss_pred cCC---ceeEEeCCCCCCCceeeEeeeee-eecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 256 HLT---PFRAEWDPKDPSESLAVIGRYIS-ENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 256 ~~~---~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
... .....|+|+ |+.++ ..........|++||+.+++... +.... ..+..+ +.++++.|+.
T Consensus 315 ~v~~~~~~~p~fspD---------G~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~-~~v~~~--~~~d~~~i~f 379 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLD---------GNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGT-WEVIGI--EALTSDYLYY 379 (740)
T ss_dssp CSSSSSCCCCEECTT---------SSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSS-SCEEEE--EEECSSEEEE
T ss_pred eEccCcCCCceEcCC---------CCEEEEEEEcCCCceEEEEEECCCCceEe-cccCC-EEEEEE--EEEeCCEEEE
Confidence 111 225679998 54333 11122334679999998766543 33332 334443 3344665554
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=1e-19 Score=167.95 Aligned_cols=238 Identities=11% Similarity=0.028 Sum_probs=158.1
Q ss_pred cccceeEEEEecCCCcEEEEEeC-CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec---CC
Q 016032 63 HSCIVNNIRFNPTNDGTVYAASS-DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN---FG 138 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~g 138 (396)
+..+|.+++|+|+ ++.|++++. ||+++||++.+++...... ... ..+..++|+|+ +.+++++. +.
T Consensus 20 ~~~~~~~~~~~~D-G~~la~~s~~~g~~~lw~~~~g~~~~lt~-~~~--------~~~~~~~~spd-~~l~~~~~~~g~~ 88 (582)
T 3o4h_A 20 IAVEKYSLQGVVD-GDKLLVVGFSEGSVNAYLYDGGETVKLNR-EPI--------NSVLDPHYGVG-RVILVRDVSKGAE 88 (582)
T ss_dssp HHSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTEEEECCS-SCC--------SEECEECTTCS-EEEEEEECSTTSC
T ss_pred hccchheeecCCC-CCeEEEEEccCCceeEEEEcCCCcEeeec-ccc--------cccccccCCCC-eEEEEeccCCCCc
Confidence 4568999999999 889988877 9999999997665533321 110 13888999999 66666664 34
Q ss_pred eEEEEeCCC--CCCCccceeeecCCccEEEEEeccCCCC-EEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEc
Q 016032 139 FLYLVDART--NSRSGEAILIHRKGSKVVGLHCNPIQPE-LLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFS 215 (396)
Q Consensus 139 ~i~i~d~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~ 215 (396)
...+|.+.. ....... .... .....+|+| +++ .+++.+.++.+.+||+.+++..... .+.. .+++||
T Consensus 89 ~~~l~~~~~~~~g~~~~l--~~~~--~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~---~~~~--~~~~~s 158 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQRL--EAVK--PMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELA---RLPG--FGFVSD 158 (582)
T ss_dssp CEEEEEEETTSTTCCEEC--TTSC--SBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEE---EESS--CEEEEE
T ss_pred ceEEEEEeccCCCccccc--cCCC--CceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEee---cCCC--ceEEEC
Confidence 455554433 2211111 1111 234567777 554 3444444555669999765432222 1222 789999
Q ss_pred CCCCEEEEEeCC----CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccccc-
Q 016032 216 PSGSKILTTSQD----NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALH- 290 (396)
Q Consensus 216 ~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~- 290 (396)
|+|++|++++.+ +.|++||+.+++... +..+ ........|+|+ |++++ ++..++
T Consensus 159 pDG~~la~~~~~~~~~~~i~~~d~~~g~~~~-----l~~~----~~~~~~~~~SpD---------G~~l~---~~~~~~~ 217 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV-----FDSG----EGSFSSASISPG---------MKVTA---GLETARE 217 (582)
T ss_dssp EETTEEEEEEEEETTEEEEEEEETTTCCCEE-----ECCS----SCEEEEEEECTT---------SCEEE---EEECSSC
T ss_pred CCCCEEEEEEEcCCCCeEEEEEcCCCCCceE-----eecC----CCccccceECCC---------CCEEE---EccCCCe
Confidence 999999988776 789999998877531 1111 111247899999 77777 445566
Q ss_pred -ceEEEEcCccchhhhhcCCCCCCCcceee--------eccCCcEEEeec-CCcEEEEcCCCcceee
Q 016032 291 -PIDFIDITTGQLVAEVMDPNITTISPVNK--------LHPRDDVLASGS-SRSIFIWRPKEKSELV 347 (396)
Q Consensus 291 -~i~vwd~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~l~sg~-d~~i~iw~~~~~~~~~ 347 (396)
.|++||+.+++.. .+..+. ..+..+ + |+|||.++++++ |+.+++|++ ++.+.
T Consensus 218 ~~i~~~d~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 218 ARLVTVDPRDGSVE-DLELPS-KDFSSY-RPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp EEEEEECTTTCCEE-ECCCSC-SHHHHH-CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred eEEEEEcCCCCcEE-EccCCC-cChhhh-hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 8999999988877 444443 445555 6 999998888888 999999999 65543
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=2.6e-17 Score=140.46 Aligned_cols=261 Identities=8% Similarity=0.039 Sum_probs=174.9
Q ss_pred cCCeEEEEecCCCCcEEEEEeCC------------------------CcEEEeecccceeeeEecCCcccceeEEEEecC
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKK------------------------GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT 75 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 75 (396)
-+.|.+++++|+| +++++...+ +.|.+||..++........++-..+..++++|+
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 4679999999999 678877766 479999998877766654456668899999999
Q ss_pred CCcEEEEEeCCCeEEEEECCCCc-ccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEe-cCCeEEEEeCCCCCCCc
Q 016032 76 NDGTVYAASSDGTVSCTDLETGL-ALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVAD-NFGFLYLVDARTNSRSG 152 (396)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~g~i~i~d~~~~~~~~ 152 (396)
+.++++...++.|++|+..... .+..+......-........+..++++| ++.++++.+ .++.|++|+.. +....
T Consensus 102 -g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~ 179 (329)
T 3fvz_A 102 -GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVT 179 (329)
T ss_dssp -SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEE
T ss_pred -CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEE
Confidence 8888888889999999986542 3333321110000111223378999999 788777776 68999999943 33222
Q ss_pred cceeeec--------CCccEEEEEeccCC-CCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE
Q 016032 153 EAILIHR--------KGSKVVGLHCNPIQ-PELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 153 ~~~~~~~--------~~~~i~~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
.. .... .-.....++++| + +.++++...++.|++|+..+++....+....+...+..++|+| +..+++
T Consensus 180 ~~-~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 180 QW-GEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp EE-CEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred Ee-ccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 11 1111 112378999999 6 7888888889999999987554433333334556788899988 433332
Q ss_pred EeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchh
Q 016032 224 TSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLV 303 (396)
Q Consensus 224 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~ 303 (396)
.+ .+ | . +...+..|++|+..+++.+
T Consensus 257 ~g---~~--~-----------------------------------------------v---~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 257 NG---KP--Y-----------------------------------------------F---GDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp EC---CC--C-----------------------------------------------T---TCSCCCCEEEEETTTCCEE
T ss_pred CC---CE--E-----------------------------------------------e---ccCCCcEEEEEEcCCCeEE
Confidence 21 11 0 0 2233455777777777766
Q ss_pred hhhc--CCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCC
Q 016032 304 AEVM--DPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKE 342 (396)
Q Consensus 304 ~~~~--~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~ 342 (396)
..+. .........+ +++|+|.++++.. ++.|++|++..
T Consensus 282 ~~~~~~~~~~~~p~~i-a~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 282 DVFKPVRKHFDMPHDI-VASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCSSSCCSSEEEE-EECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEcCCCCccCCeeEE-EECCCCCEEEEECCCCEEEEEeCCc
Confidence 6653 1222445666 8999998888877 89999999754
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=2.8e-18 Score=160.93 Aligned_cols=306 Identities=13% Similarity=0.052 Sum_probs=184.3
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEE--eCCCcEEEeecccceeeeEecCCccccee---------EEEEe--c
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSG--DKKGQVGVWDFYKVSEKIVYGNIHSCIVN---------NIRFN--P 74 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~ 74 (396)
+.+.....+.+|...|..++|++++ .++++. +.++...||....+.....+ ..|...+. ...|+ |
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~SP 88 (662)
T 3azo_A 11 QSPIDAALVASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRADGAEESA-LPAPWNVRNRVFEYSGFPWAGVPRP 88 (662)
T ss_dssp CCSCCHHHHHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTTSCEEES-SCTTCCBCCCGGGTCCCCEEEECCS
T ss_pred CCCCCHHHHhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCCCCccee-CCCCccccccccccCCccceeeeec
Confidence 3344456788999999999999876 556666 55788999996444333333 34555555 66666 8
Q ss_pred CCCcE-EEEEeC-CCeEEEEECC--C-CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC----------Ce
Q 016032 75 TNDGT-VYAASS-DGTVSCTDLE--T-GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF----------GF 139 (396)
Q Consensus 75 ~~~~~-l~s~~~-dg~v~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------g~ 139 (396)
+ ++. |+.++. +..|.++++. . +.. ..+..... ......+..++|+|+|+.|++++.+ ..
T Consensus 89 D-g~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 89 A-GGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSA----VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp S-SSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCC----STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred C-CCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCcc----CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 8 666 665543 5667777765 2 332 22221100 0011347899999999999998876 58
Q ss_pred EEEEeCCC------CCCCccceeee-cCCccEEEEEeccCCCCEEEEeeCC--------CcEEEEecC-CCCCCCccccC
Q 016032 140 LYLVDART------NSRSGEAILIH-RKGSKVVGLHCNPIQPELLLSCGND--------HFARIWDIR-RLEAGSSLCDL 203 (396)
Q Consensus 140 i~i~d~~~------~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~-~~~~~~~~~~~ 203 (396)
|++||+.+ +.. . ... .+...+..++|+| +++.|+.++.+ ..|++||+. ++.........
T Consensus 163 i~~~~~~~~~~~~~~~~-~---~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-R---ELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEETTSTTTTCGGGS-E---ESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCccccCCce-e---EEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 99999987 332 1 222 3334688899999 99999877754 379999997 33111111112
Q ss_pred -CCCCceeEEEEcCCCCEEEEEeCCC--cEEEEEcccccccCCCcceeeccccc--cc-CCceeEEeCCCCCCCceeeEe
Q 016032 204 -PHKRVVNSAYFSPSGSKILTTSQDN--RLRIWDSIFGNLDSPSREIVHSHDFN--RH-LTPFRAEWDPKDPSESLAVIG 277 (396)
Q Consensus 204 -~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~g 277 (396)
.+...+..++|+|+|+++++++.++ .|.+||+.+++....... ..... .. .....+.|+|+ +
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~---~~~~~~p~w~~~~~~~~~~~~---------~ 305 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR---EEEFAGPLWTPGMRWFAPLAN---------G 305 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC---SSBSSCCCCSTTCCSEEECTT---------S
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc---cccccCccccccCceEeEeCC---------C
Confidence 3467899999999999888888888 566666655543211110 00000 00 00113445554 5
Q ss_pred eeeeeecccccccceEEE--EcCccchhhhhcCCCCCCCcceeeeccCCcEEE--eec-C--CcEEEEcCCCccee
Q 016032 278 RYISENYNGAALHPIDFI--DITTGQLVAEVMDPNITTISPVNKLHPRDDVLA--SGS-S--RSIFIWRPKEKSEL 346 (396)
Q Consensus 278 ~~~~~~~~g~~d~~i~vw--d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~--sg~-d--~~i~iw~~~~~~~~ 346 (396)
++++ ++.. +.++|| |+.+++ +..+..+. ..+..+ +++++..++ +++ + ..|++|++.+++..
T Consensus 306 ~~~~---~~~~-~~~~l~~~d~~~~~-~~~l~~~~-~~~~~~--~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 306 LIAV---VHGK-GAAVLGILDPESGE-LVDAAGPW-TEWAAT--LTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp CEEE---EEBS-SSCEEEEEETTTTE-EEECCSSC-CEEEEE--EEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEE---EEEc-CccEEEEEECCCCc-EEEecCCC-CeEEEE--EecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 6555 4555 788888 655555 45555443 334332 266654333 344 4 35666777777643
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=2.5e-18 Score=149.10 Aligned_cols=257 Identities=10% Similarity=0.024 Sum_probs=160.0
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecc-cceeeeEec-CCcccceeEEEEecCCCcE--EEEEe----------
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFY-KVSEKIVYG-NIHSCIVNNIRFNPTNDGT--VYAAS---------- 84 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~--l~s~~---------- 84 (396)
+...+..++|+|++ ++|++++.+ .|.+|++. +++...... ..+ +.+.+++|+|+ +++ ++++.
T Consensus 38 ~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTN-TRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSC-CEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCC-CCEEEEEEecCCcceeccce
Confidence 34468899999999 578888877 99999997 555433221 111 23566899999 774 44553
Q ss_pred ---CCCeEEEEECC-CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-CCeEEEEeCC-CCCCCccceeee
Q 016032 85 ---SDGTVSCTDLE-TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-FGFLYLVDAR-TNSRSGEAILIH 158 (396)
Q Consensus 85 ---~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~i~d~~-~~~~~~~~~~~~ 158 (396)
.++.+.+|++. .++....+..... .....+.+++|+|+|++++++.. ++.|++|++. +++... .....
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~ 187 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEY-----QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVD 187 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEEC-----CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEE
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEe-----CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEe
Confidence 68999999997 4554433321100 00123889999999998887764 6799999998 544321 11111
Q ss_pred --cCCccEEEEEeccCCCCEEEEeeC-CCcEEEEecCC--CCCC---CccccCC-----CCC------ceeEEE-EcCCC
Q 016032 159 --RKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRR--LEAG---SSLCDLP-----HKR------VVNSAY-FSPSG 218 (396)
Q Consensus 159 --~~~~~i~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~--~~~~---~~~~~~~-----~~~------~i~~~~-~~~~~ 218 (396)
.++..+..++|+| +++++++++. ++.|.+|++.. ++.. ..+..+. +.. .+..++ |+|+|
T Consensus 188 ~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG 266 (365)
T 1jof_A 188 APDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG 266 (365)
T ss_dssp CSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS
T ss_pred cCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC
Confidence 1245689999999 9988877764 78999998753 2211 1122221 122 588999 99999
Q ss_pred CEEEEEeCCC------cEEEEEcc-cccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccc-ccc
Q 016032 219 SKILTTSQDN------RLRIWDSI-FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGA-ALH 290 (396)
Q Consensus 219 ~~l~~~~~d~------~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~d~ 290 (396)
++|++++.+. .|.+|++. ++++.... .... .. ...+..++|+|..- +|++++ .++ .++
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~-~~~~--~~--~~~~~~~a~sp~~~------dg~~l~---v~~~~~~ 332 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLRDCGSIEKQL-FLSP--TP--TSGGHSNAVSPCPW------SDEWMA---ITDDQEG 332 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE-EEEE--CS--SCCTTCCCEEECTT------CTTEEE---EECSSSC
T ss_pred CEEEEECCCCCCCCCCeEEEEEECCCCCEEEee-eeee--cC--CCCcccceecCCCc------CCCEEE---EEEcCCC
Confidence 9988776432 89999996 44431100 0000 00 11122456666200 266666 344 458
Q ss_pred ceEEEEcCcc
Q 016032 291 PIDFIDITTG 300 (396)
Q Consensus 291 ~i~vwd~~~~ 300 (396)
.|.+|++...
T Consensus 333 ~v~v~~~~~~ 342 (365)
T 1jof_A 333 WLEIYRWKDE 342 (365)
T ss_dssp EEEEEEEETT
T ss_pred eEEEEEEchh
Confidence 9999998655
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=5.2e-18 Score=146.33 Aligned_cols=282 Identities=9% Similarity=-0.001 Sum_probs=183.5
Q ss_pred CCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----------CCCeEEEEECCCCcccceeecCCCCC
Q 016032 41 KKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----------SDGTVSCTDLETGLALSLMNVNPNGW 110 (396)
Q Consensus 41 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~ 110 (396)
.|+.|.+||..+++....+. .+..+ .++|+|+ ++++++++ .++.|.+||+.+++.+..+.......
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~-~g~~p--~i~~spd-g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVP-TAFNG--HVQVSND-GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEE-CCEEE--EEEECTT-SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred ccCeEEEEECCCCeEEEEec-CCCCC--ceEECCC-CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 37899999998887776663 34444 8999999 88888876 36789999999988888776543211
Q ss_pred CCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEE
Q 016032 111 HGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188 (396)
Q Consensus 111 ~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~ 188 (396)
.. ......++++|++++|+++.. ++.|.+||+.+++....+ .... ....+.+.|.....+++.+.||.+.+
T Consensus 105 ~~---g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~---i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 105 QG---LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDV---TAAA-GCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp CB---CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEE---GGGT-TEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred cc---CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEE---ecCC-CcceeEEcCCCCeeEEEECCCCcEEE
Confidence 00 012677999999999999875 579999999987543320 1111 22335667734477888889999999
Q ss_pred EecCCCCCCC-cc---ccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee--e----cccccccC
Q 016032 189 WDIRRLEAGS-SL---CDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV--H----SHDFNRHL 257 (396)
Q Consensus 189 wd~~~~~~~~-~~---~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~----~~~~~~~~ 257 (396)
|++....... .. ..+ ....+ ..+.+++++..++..+.++.+.++|+..+.... ..... . ...+. ..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~-p~ 254 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKV-DGPWSLLNDEDKAKNWV-PG 254 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEE-EEEEESCCHHHHHTTCE-EC
T ss_pred EEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCcee-cccccccCccccccccc-cC
Confidence 9885421111 00 111 11122 233446778788888889999999987543210 00000 0 00000 00
Q ss_pred CceeEEeCCCCCCCceeeEeeeeeeecc--cc------cccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 258 TPFRAEWDPKDPSESLAVIGRYISENYN--GA------ALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~--g~------~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
....++++|+. ..+..... +. ..+.|.+||+.+++.+.++..+. ...+ +|+|+|++|++
T Consensus 255 g~~~~a~~~dg---------~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~i-a~spdg~~l~v 321 (361)
T 2oiz_A 255 GYNLVGLHRAS---------GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSM-TIDQQRNLMLT 321 (361)
T ss_dssp CSSCEEEETTT---------TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEE-EEETTTTEEEE
T ss_pred CeeEEEEecCC---------CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEE-EECCCCCEEEE
Confidence 01125667763 22221101 10 24579999999999999887764 6667 89999999988
Q ss_pred ecCCcEEEEcCCCc--ceeeec
Q 016032 330 GSSRSIFIWRPKEK--SELVEQ 349 (396)
Q Consensus 330 g~d~~i~iw~~~~~--~~~~~~ 349 (396)
++++.|.+||+.++ +.+..+
T Consensus 322 ~n~~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 322 LDGGNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp ECSSCEEEEECSSSSCEEEEEE
T ss_pred eCCCeEEEEECCCCcceeeEEe
Confidence 77799999999999 888886
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=4.3e-18 Score=161.23 Aligned_cols=317 Identities=8% Similarity=0.003 Sum_probs=187.6
Q ss_pred CCCCCccceeeeccccCCe-----EEEEecCCCCcEEEEEeCC---------CcEEEeecccceeeeEecCCcccceeEE
Q 016032 5 HVIPDQVNCAVIRYHSRRV-----TCLEFHPTNNHILLSGDKK---------GQVGVWDFYKVSEKIVYGNIHSCIVNNI 70 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~v~~~ 70 (396)
|++.++.+...+.+|.... ..++||||| +.|+.++.+ +.+.+||+.+++.... ..|...+..+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l--~~~~~~~~~~ 117 (740)
T 4a5s_A 41 FNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE--ERIPNNTQWV 117 (740)
T ss_dssp EETTTCCEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS--SCCCTTEEEE
T ss_pred EECCCCceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCcEEEc--ccCCCcceee
Confidence 5666777677778876432 347889999 567777665 5677999999876543 4577889999
Q ss_pred EEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCC--CCCCCc-------ceeeeEEEeCCCCCEEEEEecCC---
Q 016032 71 RFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNG--WHGPRT-------WRMLYGMDINPEKGVVLVADNFG--- 138 (396)
Q Consensus 71 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~g--- 138 (396)
+|+|+ ++.|+.+. ++.|++|++.+++........... ..+... ......+.|+|||+.|+.+..|.
T Consensus 118 ~~SPd-G~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v 195 (740)
T 4a5s_A 118 TWSPV-GHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEV 195 (740)
T ss_dssp EECSS-TTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTC
T ss_pred EECCC-CCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCC
Confidence 99999 88888875 789999999887754322111000 000000 01124588999999999875321
Q ss_pred ---------------------------------eEEEEeCCC---CCCCccceeee------cCCccEEEEEeccCCCCE
Q 016032 139 ---------------------------------FLYLVDART---NSRSGEAILIH------RKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 139 ---------------------------------~i~i~d~~~---~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~ 176 (396)
.|++||+.+ +...... ... .+...+..++|+| ++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~wsp-dg~~ 273 (740)
T 4a5s_A 196 PLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWAT-QERI 273 (740)
T ss_dssp CEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEE-TTEE
T ss_pred ceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE-EecCCccCCCCCeEEEEEEEeC-CCeE
Confidence 578888887 5321111 111 2555789999999 8886
Q ss_pred EEEeeC----CCcEEEEecCCCC----CCCccc--cCCCCCcee-----EEEEcCCCCEEE-EEeC-C--CcEEEEEccc
Q 016032 177 LLSCGN----DHFARIWDIRRLE----AGSSLC--DLPHKRVVN-----SAYFSPSGSKIL-TTSQ-D--NRLRIWDSIF 237 (396)
Q Consensus 177 l~~~~~----d~~i~~wd~~~~~----~~~~~~--~~~~~~~i~-----~~~~~~~~~~l~-~~~~-d--~~i~iwd~~~ 237 (396)
++.... +..|++||+.+++ +..... ...+...|. .++|+|||+.|+ ..+. + ..|.+||+.+
T Consensus 274 ~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 274 SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred EEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 665432 3479999998765 211111 123444444 789999999877 5553 3 3588888876
Q ss_pred ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccc----ccccceEEEEcCccchhhhhcCC---C
Q 016032 238 GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNG----AALHPIDFIDITTGQLVAEVMDP---N 310 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g----~~d~~i~vwd~~~~~~~~~~~~~---~ 310 (396)
++..... .... . +...+.++ ++.+....+. .....|+..++..+.....+... .
T Consensus 354 ~~~~~lT-----~g~~----~-v~~~~~~d---------~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~ 414 (740)
T 4a5s_A 354 KDCTFIT-----KGTW----E-VIGIEALT---------SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPE 414 (740)
T ss_dssp SSCEESC-----CSSS----C-EEEEEEEC---------SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTT
T ss_pred CceEecc-----cCCE----E-EEEEEEEe---------CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCC
Confidence 6542111 1110 0 01111122 2222211122 22334555555544432122211 1
Q ss_pred CCCCcceeeeccCCcEEEeec----CCcEEEEcCCCcceeee
Q 016032 311 ITTISPVNKLHPRDDVLASGS----SRSIFIWRPKEKSELVE 348 (396)
Q Consensus 311 ~~~i~~~~~~~~~~~~l~sg~----d~~i~iw~~~~~~~~~~ 348 (396)
....... +|+|++++++... -..+.+++..+++.+..
T Consensus 415 ~~~~~~~-~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~ 455 (740)
T 4a5s_A 415 RCQYYSV-SFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV 455 (740)
T ss_dssp TBCBEEE-EECTTSSEEEEEECSBSSCEEEEEETTTTEEEEE
T ss_pred CCceEEE-EECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEE
Confidence 1334445 7999999776533 25788888887765444
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=2.5e-16 Score=131.69 Aligned_cols=249 Identities=10% Similarity=0.118 Sum_probs=166.9
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-----CCcccceeEEEEe-cCCCcEEEEEeC-CCeE
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-----NIHSCIVNNIRFN-PTNDGTVYAASS-DGTV 89 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~-~~~~~~l~s~~~-dg~v 89 (396)
.+|...+.+++++|++ +++++...++.|.+||... .....+. .++...+..+++. ++ +.++++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~-g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNS-GDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTT-TEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCCC-CEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCC-CeEEEEcCCCCCEE
Confidence 3566789999999998 6788888889999999874 3333332 1344678999995 55 666655533 7899
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEe
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC 169 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (396)
.+|+ .+++.+..+..... ..+.+++++++++++++...++.|.+||... .... ..........+..+++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~--------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~-~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATIL--------QHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLH-KFGCSKHLEFPNGVVV 171 (286)
T ss_dssp EEEC-TTSCEEEEECTTTC--------SCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEE-EEECTTTCSSEEEEEE
T ss_pred EEEC-CCCcEEEEecCccC--------CCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEE-EeCCCCccCCcEEEEE
Confidence 9999 55665554432111 2278999999999888878889999999653 2211 1111123346899999
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC-cEEEEEcccccccCCCccee
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN-RLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~ 248 (396)
+| +++++++...++.|++||... +....+...++...+..++++++|+++++...++ .|.+||.. ++.+...
T Consensus 172 ~~-~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~---- 244 (286)
T 1q7f_A 172 ND-KQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISAL---- 244 (286)
T ss_dssp CS-SSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEE----
T ss_pred CC-CCCEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEE----
Confidence 99 888888888889999999742 2111121112235789999999999888887776 99999964 3332111
Q ss_pred ecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 249 HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
. .......+..++++|+ |++++ + +.++.|++|+.....
T Consensus 245 ~--~~~~~~~~~~i~~~~~---------g~l~v---s-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 245 E--SKVKHAQCFDVALMDD---------GSVVL---A-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp E--ESSCCSCEEEEEEETT---------TEEEE---E-ETTTEEEEEECSCCC
T ss_pred c--ccCCCCcceeEEECCC---------CcEEE---E-CCCCeEEEEEccccc
Confidence 0 1111223456788887 66555 3 357899999976543
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=1.1e-16 Score=150.18 Aligned_cols=212 Identities=8% Similarity=-0.002 Sum_probs=139.7
Q ss_pred ceeeeccccCCeE---------EEEec--CCCCc-EEEEEeCCCcEEEeecc--c-ceeeeEecCC----cccceeEEEE
Q 016032 12 NCAVIRYHSRRVT---------CLEFH--PTNNH-ILLSGDKKGQVGVWDFY--K-VSEKIVYGNI----HSCIVNNIRF 72 (396)
Q Consensus 12 ~~~~~~~h~~~v~---------~~~~~--~~~~~-~l~s~~~dg~i~iwd~~--~-~~~~~~~~~~----~~~~v~~~~~ 72 (396)
....+..|...+. ...|+ |||.. ++++...+..|.+|++. + +. ...+... |...+..++|
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEE
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEE
Confidence 3456666776666 66666 99965 44444446677777776 2 33 2233121 6778999999
Q ss_pred ecCCCcEEEEEeCC----------CeEEEEECCC------Ccccceee-cCCCCCCCCCcceeeeEEEeCCCCCEEEEEe
Q 016032 73 NPTNDGTVYAASSD----------GTVSCTDLET------GLALSLMN-VNPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135 (396)
Q Consensus 73 ~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 135 (396)
+|+ ++.|++++.+ ..|.+||+.+ ++.. .+. ... ..+..++|+|||+.|+.++
T Consensus 138 spD-g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~---------~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 138 LPE-RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAH---------RFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp ETT-TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCS---------SEECCCEECTTSSEEEEEE
T ss_pred CCC-CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCC---------CcccCceECCCCCEEEEEE
Confidence 999 8888888776 5899999987 4432 221 111 2377889999999999887
Q ss_pred cC--------CeEEEEeCC-CCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCC--cEEEEecCCCCCCCccccCC
Q 016032 136 NF--------GFLYLVDAR-TNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDH--FARIWDIRRLEAGSSLCDLP 204 (396)
Q Consensus 136 ~~--------g~i~i~d~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~ 204 (396)
.+ ..|++||+. ++...........+...+..++|+| ++++++++..++ .|++||+.+.+...... .
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~--~ 283 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCR--R 283 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSC--C
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeeccc--c
Confidence 54 379999998 4421111111222345789999999 888888888888 56666664433211111 1
Q ss_pred CCCc--------eeEEEEcCCCCEEEEEeCCCcEEEE--Eccccc
Q 016032 205 HKRV--------VNSAYFSPSGSKILTTSQDNRLRIW--DSIFGN 239 (396)
Q Consensus 205 ~~~~--------i~~~~~~~~~~~l~~~~~d~~i~iw--d~~~~~ 239 (396)
+... +..++|+|++.++++++. +.++|| |+.+++
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 1111 567899999999999998 999999 544443
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=6e-17 Score=139.70 Aligned_cols=279 Identities=9% Similarity=0.016 Sum_probs=177.3
Q ss_pred CCCCCccceeeeccccCCeEEEEecCCCCcEEEEEe----------CCCcEEEeecccceeeeEecCC-----cccceeE
Q 016032 5 HVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGD----------KKGQVGVWDFYKVSEKIVYGNI-----HSCIVNN 69 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~ 69 (396)
|+..+.+.+..+..+..+ .++|+|++ ++|+++. .++.|.+||..+.+....+... +......
T Consensus 36 ~D~~t~~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~ 112 (361)
T 2oiz_A 36 YDYTNGKFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGL 112 (361)
T ss_dssp EETTTCCEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGG
T ss_pred EECCCCeEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcce
Confidence 344555666677766665 89999999 4566654 3667999999887766555311 2345778
Q ss_pred EEEecCCCcEEEEEeC--CCeEEEEECCCCcccce-eecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeC
Q 016032 70 IRFNPTNDGTVYAASS--DGTVSCTDLETGLALSL-MNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDA 145 (396)
Q Consensus 70 ~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~ 145 (396)
++|+|+ +++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.+|.+.+|++
T Consensus 113 i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-----------~~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 113 FRQTTD-GKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-----------CWSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp EEECTT-SSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-----------EEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred EEECCC-CCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-----------cceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 999999 888888764 68999999999887665 43321 2224456654 67778888899988887
Q ss_pred CCCCCCccce----eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC--CccccCC--------CCCceeE
Q 016032 146 RTNSRSGEAI----LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG--SSLCDLP--------HKRVVNS 211 (396)
Q Consensus 146 ~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~--------~~~~i~~ 211 (396)
.......... ...... ....+.+.+ ++..++..+.++.|.++|+...... ..+.... .......
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKD-DPIFIAPAL-DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTT-SCBCSCCEE-CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred CCCCcEeeeccccceEcCCC-CceEEEecc-cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence 6522211000 011111 112233455 5666777778899999998643211 0000000 0111223
Q ss_pred EEEcCCCCEEEEEeC-----------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeee
Q 016032 212 AYFSPSGSKILTTSQ-----------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYI 280 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 280 (396)
++|+|+++.++++.. .+.|.+||+.+++.+... ... . +..+.|+|+ |+++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i-------~~~--~-p~~ia~spd---------g~~l 319 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI-------PGR--D-ALSMTIDQQ---------RNLM 319 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE-------ECT--T-CCEEEEETT---------TTEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE-------ecC--C-eeEEEECCC---------CCEE
Confidence 789999888877643 347999999988764321 111 1 668899998 6666
Q ss_pred eeecccccccceEEEEcCcc--chhhhhcCCCCCCCcceeeeccCCc
Q 016032 281 SENYNGAALHPIDFIDITTG--QLVAEVMDPNITTISPVNKLHPRDD 325 (396)
Q Consensus 281 ~~~~~g~~d~~i~vwd~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~ 325 (396)
. +++. +.|.+||+.++ +.+.++.... .....+ +++|+|+
T Consensus 320 ~---v~n~-~~v~v~D~~t~~l~~~~~i~~~G-~~P~~~-~~~p~G~ 360 (361)
T 2oiz_A 320 L---TLDG-GNVNVYDISQPEPKLLRTIEGAA-EASLQV-QFHPVGG 360 (361)
T ss_dssp E---EECS-SCEEEEECSSSSCEEEEEETTSC-SSEEEE-EECCCSC
T ss_pred E---EeCC-CeEEEEECCCCcceeeEEeccCC-CCcEEE-EecCCCC
Confidence 5 3444 99999999999 8887764332 333344 7899885
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=1e-16 Score=140.24 Aligned_cols=264 Identities=13% Similarity=0.057 Sum_probs=164.1
Q ss_pred EeecccceeeeEecCCcccceeE-----EEEecCCCcEEEEEeC-CC--eEEEEECCCCcccceeecCCCCCCCCCccee
Q 016032 47 VWDFYKVSEKIVYGNIHSCIVNN-----IRFNPTNDGTVYAASS-DG--TVSCTDLETGLALSLMNVNPNGWHGPRTWRM 118 (396)
Q Consensus 47 iwd~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (396)
.++..++.....+ ..|...... .+|+|+ ++.|+.++. ++ .|.+||+.+++.......+.. .
T Consensus 14 ~~~~~~g~~~~~l-t~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~---------~ 82 (388)
T 3pe7_A 14 YQDASTGAQVTRL-TPPDVTCHRNYFYQKCFTRD-GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD---------N 82 (388)
T ss_dssp EECTTTCCEEEEC-SCTTSCEECCCTTSCCBCTT-SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB---------C
T ss_pred EecCCCCcceEEe-cCCcccccchhhcCccCCCC-CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC---------C
Confidence 4455555555554 445555555 789999 888888776 66 488889988876554432211 1
Q ss_pred eeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEE--EeccCCCCEEEEe----------------
Q 016032 119 LYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGL--HCNPIQPELLLSC---------------- 180 (396)
Q Consensus 119 v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~l~~~---------------- 180 (396)
+..+.|+|+++.|+.+..++.|++||+.+++... . ...+...+... .++| ++.+++..
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-~--~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~ 158 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-V--YQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKF 158 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE-E--EECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCCCccee-e--eechhhcccccceeECC-CCCeeccccccCcccccccccchh
Confidence 3456799999999999999999999999865432 1 12222234333 3477 88877742
Q ss_pred ------eCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC-CCCEEEEEeCC------CcEEEEEcccccccCCCcce
Q 016032 181 ------GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP-SGSKILTTSQD------NRLRIWDSIFGNLDSPSREI 247 (396)
Q Consensus 181 ------~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~ 247 (396)
..+..|++||+.+++... ...+...+..++|+| +|+.|+....+ ..|.++|+..+......
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~---l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--- 232 (388)
T 3pe7_A 159 HEFYFTKPCCRLMRVDLKTGESTV---ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK--- 232 (388)
T ss_dssp HHHGGGCCCEEEEEEETTTCCEEE---EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC---
T ss_pred hhhhccCCcceEEEEECCCCceEE---eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee---
Confidence 244689999998654322 223556789999999 99999877753 37888887655432110
Q ss_pred eecccccccCCceeEEeCCCCCCCceeeEeeeeeeec--ccccccceEEEEcCccchhh--hhcCC--CCCCCcceeeec
Q 016032 248 VHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENY--NGAALHPIDFIDITTGQLVA--EVMDP--NITTISPVNKLH 321 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~g~~d~~i~vwd~~~~~~~~--~~~~~--~~~~i~~~~~~~ 321 (396)
. ...........|+|+ |+.++... .+..+..|++||+.+++... .+.+. ........ +|+
T Consensus 233 --~--~~~~~~~~~~~~spd---------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~s 298 (388)
T 3pe7_A 233 --T--HAEGESCTHEFWVPD---------GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMV 298 (388)
T ss_dssp --C--CCTTEEEEEEEECTT---------SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEE
T ss_pred --e--CCCCcccccceECCC---------CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEc
Confidence 0 000011235789998 44333111 12333459999999887432 22220 00112223 699
Q ss_pred cCCcEEEee---------c-CCcEEEEcCCCcce
Q 016032 322 PRDDVLASG---------S-SRSIFIWRPKEKSE 345 (396)
Q Consensus 322 ~~~~~l~sg---------~-d~~i~iw~~~~~~~ 345 (396)
|+|+.|+.. . +..|++|++.+++.
T Consensus 299 pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 299 GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEECCC------------CCCCEEEEEETTTTEE
T ss_pred cCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 999988753 3 67999999998764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.76 E-value=1.6e-16 Score=135.92 Aligned_cols=277 Identities=9% Similarity=0.016 Sum_probs=175.3
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA 99 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (396)
...|.+++|+|++ ..++..+.++.++.|. ......+ ..+...+.+++|+|+ +.+++++..++.|.+||..+++.
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~-g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 5 QQDLPTLFYSGKS-NSAVPIISESELQTIT---AEPWLEI-SKKGLQLEGLNFDRQ-GQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp -CCCCBCCSCGGG-GCSSCCCCGGGSCEEE---CEEEEEE-ESSCCCEEEEEECTT-SCEEEEETTTCEEEEECTTTCCE
T ss_pred ccccceeeecCCc-cceeEEeecccCcccc---cceeEEE-eccCccccCcEECCC-CCEEEEECCCCEEEEEeCCCCcE
Confidence 3457889999987 4566667788999992 3333333 345667799999998 77777888899999999988776
Q ss_pred cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC----CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 100 LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF----GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
........ ..+.+++++++++++++...+ +.|.+||..+..... ..........+..++++| +++
T Consensus 79 ~~~~~~~~---------~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~i~~d~-~g~ 147 (333)
T 2dg1_A 79 KRPFVSHK---------ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD-IIEDLSTAYCIDDMVFDS-KGG 147 (333)
T ss_dssp EEEEECSS---------SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE-EECSSSSCCCEEEEEECT-TSC
T ss_pred EEEeeCCC---------CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE-EEccCccCCcccceEECC-CCC
Confidence 54332211 128899999999988877666 689999988755321 111112334689999999 888
Q ss_pred EEEEeeC------CCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE-EeCCCcEEEEEccc-ccccCCCcce
Q 016032 176 LLLSCGN------DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT-TSQDNRLRIWDSIF-GNLDSPSREI 247 (396)
Q Consensus 176 ~l~~~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~iwd~~~-~~~~~~~~~~ 247 (396)
++++... .+.|..+|....+.. .+ ......+..++|+|+++.|++ .+.++.|.+||+.+ +.........
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~--~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDFRTVT-PI--IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTSCCEE-EE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred EEEEeccccccCCCceEEEEeCCCCEEE-Ee--ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce
Confidence 7777654 355666665432221 11 122345788999999986654 45678999999964 3321111000
Q ss_pred eecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCC-----CCCcceeeecc
Q 016032 248 VHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNI-----TTISPVNKLHP 322 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~-----~~i~~~~~~~~ 322 (396)
. ...+.....+..++++++ |++.+ +...++.|.+||. +++.+..+..+.. ..+..+ +|+|
T Consensus 225 ~-~~~~~~~~~~~~i~~d~~---------G~l~v---~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~-~~~~ 289 (333)
T 2dg1_A 225 I-PYYFTGHEGPDSCCIDSD---------DNLYV---AMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHP-QFIP 289 (333)
T ss_dssp E-EEECCSSSEEEEEEEBTT---------CCEEE---EEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEE-EECT
T ss_pred E-EEecCCCCCCCceEECCC---------CCEEE---EEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceE-EECC
Confidence 0 001111123345677776 55544 3344678999998 5665555543321 145666 7999
Q ss_pred CCcEEEeec
Q 016032 323 RDDVLASGS 331 (396)
Q Consensus 323 ~~~~l~sg~ 331 (396)
++..|+.++
T Consensus 290 dg~~L~v~~ 298 (333)
T 2dg1_A 290 GTNQLIICS 298 (333)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEe
Confidence 987666544
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=6.3e-16 Score=129.22 Aligned_cols=251 Identities=8% Similarity=0.045 Sum_probs=165.1
Q ss_pred CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEe-CCCCCEEEEEec-CCe
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDI-NPEKGVVLVADN-FGF 139 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~-~g~ 139 (396)
++-..+.+++++++ +.++++...++.|.+||.. ++....+..... .......+..+++ .+++.++++... ++.
T Consensus 27 g~~~~p~~v~~~~~-g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~---~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQ-NDIIVADTNNHRIQIFDKE-GRFKFQFGECGK---RDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TCBSCEEEEEECTT-CCEEEEEGGGTEEEEECTT-SCEEEEECCBSS---STTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CccCCCceEEECCC-CCEEEEECCCCEEEEECCC-CcEEEEecccCC---CcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 45567899999998 7888888889999999987 555444432110 0111123788999 566766666543 789
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS 219 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (396)
|.+||. .+...... .......+.++++.| +++++++...++.|.+||... +....+....+...+..++++|+|+
T Consensus 102 i~~~d~-~g~~~~~~--~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 102 IQIYNQ-YGQFVRKF--GATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EEEECT-TSCEEEEE--CTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSE
T ss_pred EEEECC-CCcEEEEe--cCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCC
Confidence 999994 33322111 112223688999999 888888888889999999642 2211221113445689999999999
Q ss_pred EEEEEeCCCcEEEEEcccccccCCCcceeecccccc-cCCceeEEeCCCCCCCceeeEeeeeeeeccccccc-ceEEEEc
Q 016032 220 KILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNR-HLTPFRAEWDPKDPSESLAVIGRYISENYNGAALH-PIDFIDI 297 (396)
Q Consensus 220 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~-~i~vwd~ 297 (396)
++++...++.|++||... +... .....+ ...+..++++++ |++++ +...++ .|.+|+.
T Consensus 177 l~v~~~~~~~i~~~~~~g-~~~~-------~~~~~g~~~~p~~i~~d~~---------G~l~v---~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYEG-QYLR-------QIGGEGITNYPIGVGINSN---------GEILI---ADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEEEEGGGTEEEEEETTC-CEEE-------EESCTTTSCSEEEEEECTT---------CCEEE---EECSSSCEEEEECT
T ss_pred EEEEECCCCEEEEEcCCC-CEEE-------EEccCCccCCCcEEEECCC---------CCEEE---EeCCCCEEEEEECC
Confidence 888878899999999753 2211 111111 133457888887 55555 344554 8999995
Q ss_pred CccchhhhhcCCCC-CCCcceeeeccCCcEEEeecCCcEEEEcCCCcc
Q 016032 298 TTGQLVAEVMDPNI-TTISPVNKLHPRDDVLASGSSRSIFIWRPKEKS 344 (396)
Q Consensus 298 ~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~~ 344 (396)
+++.+..+..+.. .....+ +++|+|+++++..|+.|++|++....
T Consensus 237 -~g~~~~~~~~~~~~~~~~~i-~~~~~g~l~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 237 -DGQLISALESKVKHAQCFDV-ALMDDGSVVLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp -TSCEEEEEEESSCCSCEEEE-EEETTTEEEEEETTTEEEEEECSCCC
T ss_pred -CCCEEEEEcccCCCCcceeE-EECCCCcEEEECCCCeEEEEEccccc
Confidence 5666666554331 224456 89999998888549999999986644
No 176
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=1.5e-14 Score=121.59 Aligned_cols=288 Identities=6% Similarity=-0.038 Sum_probs=187.9
Q ss_pred eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
.+..+...+.++++.++| +++++...++.|.+||.. +.........+...+.++++.++ +.++++...++.|..|+.
T Consensus 9 ~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSD-GEVWFTENAANKIGRITK 85 (299)
T ss_dssp ECCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred cCCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCC-CCEEEeCCCCCeEEEECC
Confidence 344566789999999998 566666557899999988 44333322335577999999998 777777777889999997
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
. ++. ..+..+.. ...+..+++.+++.++++...++.|..||. .+... ..........+..+++.+ ++
T Consensus 86 ~-g~~-~~~~~~~~-------~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~--~~~~~~~~~~~~~i~~~~-~g 152 (299)
T 2z2n_A 86 K-GII-KEYTLPNP-------DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR--EYELPNKGSYPSFITLGS-DN 152 (299)
T ss_dssp T-SCE-EEEECSST-------TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE--EEECSSTTCCEEEEEECT-TS
T ss_pred C-CcE-EEEeCCCc-------CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE--EecCCCCCCCCceEEEcC-CC
Confidence 6 332 23322211 123788999999988888777889999998 43321 111122334688999999 88
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeeccccc
Q 016032 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFN 254 (396)
Q Consensus 175 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 254 (396)
.++++...++.|..||. +.+.. .+........+..+++++++.++++...++.|.+||. +++... . .. ..
T Consensus 153 ~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~----~-~~--~~ 222 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-SGDIT-EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE----F-KI--PT 222 (299)
T ss_dssp CEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE----E-EC--SS
T ss_pred CEEEEeCCCCEEEEEcC-CCcEE-EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE----E-EC--CC
Confidence 88887777789999998 43321 1111223456889999999987777667889999998 555321 0 00 01
Q ss_pred ccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc-CCCCCCCcceeeeccCCcEEEeecCC
Q 016032 255 RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM-DPNITTISPVNKLHPRDDVLASGSSR 333 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~sg~d~ 333 (396)
....+..+.++++ |++.+ +...++.|..||. +++.. .+. ......+.++ ++ ++|.+.++...+
T Consensus 223 ~~~~~~~i~~~~~---------g~l~v---~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i-~~-~~g~l~v~~~~~ 286 (299)
T 2z2n_A 223 PNARPHAITAGAG---------IDLWF---TEWGANKIGRLTS-NNIIE-EYPIQIKSAEPHGI-CF-DGETIWFAMECD 286 (299)
T ss_dssp TTCCEEEEEECST---------TCEEE---EETTTTEEEEEET-TTEEE-EEECSSSSCCEEEE-EE-CSSCEEEEETTT
T ss_pred CCCCceeEEECCC---------CCEEE---eccCCceEEEECC-CCceE-EEeCCCCCCccceE-Ee-cCCCEEEEecCC
Confidence 1223456777776 44444 2335677999998 45422 221 1222455666 67 888888776666
Q ss_pred cEEEEcCCCcc
Q 016032 334 SIFIWRPKEKS 344 (396)
Q Consensus 334 ~i~iw~~~~~~ 344 (396)
.|..+++.+++
T Consensus 287 ~l~~~~~~~~~ 297 (299)
T 2z2n_A 287 KIGKLTLIKDN 297 (299)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEcCccc
Confidence 77777776653
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=1.6e-15 Score=127.40 Aligned_cols=210 Identities=11% Similarity=0.059 Sum_probs=145.5
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG 87 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 87 (396)
.....+..+..+.....+++|+|+++.+++++..++.|..|+..++ ...+ ..+...+.+++++|+ +.++++...++
T Consensus 15 ~~~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~l~~~~d-g~l~v~~~~~~ 90 (296)
T 3e5z_A 15 PAGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHHQNGHCLNKQ-GHLIACSHGLR 90 (296)
T ss_dssp CTTCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSSEEEEEECTT-CCEEEEETTTT
T ss_pred CCCCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCCcceeeECCC-CcEEEEecCCC
Confidence 3445566777788889999999999548889989999999999887 3333 346678999999998 78777777778
Q ss_pred eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE----e-------------cCCeEEEEeCCCCCC
Q 016032 88 TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA----D-------------NFGFLYLVDARTNSR 150 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~-------------~~g~i~i~d~~~~~~ 150 (396)
.|.+||..+++.......... .....+..++++|+|+++++. + ..+.|..++.. +..
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~-----~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEG-----KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL 164 (296)
T ss_dssp EEEEECSTTCCEEEEECEETT-----EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE
T ss_pred eEEEEcCCCCcEEEEeeccCC-----CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE
Confidence 999999988775433221111 011226789999999988873 2 13467777665 221
Q ss_pred CccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecC-CCCC---CCccccCCCCCceeEEEEcCCCCEEEEEeC
Q 016032 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR-RLEA---GSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 151 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
............++|+| +++.+++.+.++.|++|++. ++.. ...+ ..+...+..++++++|+++++.
T Consensus 165 ----~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 165 ----SAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp ----EEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--
T ss_pred ----EEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--
Confidence 12223334678999999 88888777788999999986 2221 1112 1234556778888888766555
Q ss_pred CCcEEEEEcc
Q 016032 227 DNRLRIWDSI 236 (396)
Q Consensus 227 d~~i~iwd~~ 236 (396)
++.|.+||..
T Consensus 236 ~~~v~~~~~~ 245 (296)
T 3e5z_A 236 GDGVHVLTPD 245 (296)
T ss_dssp TTEEEEECTT
T ss_pred CCeEEEECCC
Confidence 6778888764
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=5.4e-15 Score=133.93 Aligned_cols=280 Identities=14% Similarity=0.119 Sum_probs=187.9
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECC--CCcccceeecCCCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLE--TGLALSLMNVNPNGWH 111 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~ 111 (396)
.++++...++.|.++|..+++.+..+. ....+..+.|+|+ ++++++++.++.|.+||+. +++.+..+....
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~--~g~~p~~v~~SpD-Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---- 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLD--TGYAVHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---- 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCCEEEEEECCS----
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEe--CCCCccceEECCC-CCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC----
Confidence 567788889999999999988877764 3446779999999 8999999999999999996 777766664322
Q ss_pred CCCcceeeeEEEeC----CCCCEEEEEec-CCeEEEEeCCCCCCCccceeeec--------CCccEEEEEeccCCCCEEE
Q 016032 112 GPRTWRMLYGMDIN----PEKGVVLVADN-FGFLYLVDARTNSRSGEAILIHR--------KGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 112 ~~~~~~~v~~~~~~----~~~~~l~~~~~-~g~i~i~d~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~l~ 178 (396)
....++|+ |+|+++++++. ++.+.++|..+.+.......... ....+..+..++....+++
T Consensus 241 ------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 241 ------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp ------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred ------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 26789999 69998887764 58999999888765543221110 1225778888884455667
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccccCCCcceeecccccccC
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHL 257 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 257 (396)
....+|.|.++|....+... +..+........+.|+|++++|++++ .++.|.++|+.++++..... ......+.
T Consensus 315 ~~~~~g~v~~vd~~~~~~~~-v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~----vgg~~Php 389 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNNLK-TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED----TGGQTPHP 389 (567)
T ss_dssp EETTTTEEEEEETTCSSEEE-EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE----CSSSSBCC
T ss_pred EecCCCeEEEEecCCCccce-eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe----ccCcCCCC
Confidence 77778999999986543211 22223344567889999999987765 57899999999887643211 10000010
Q ss_pred CceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc-------cchhhhhcCCCCCCCcceeeeccCCcEEEee
Q 016032 258 TPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT-------GQLVAEVMDPNITTISPVNKLHPRDDVLASG 330 (396)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg 330 (396)
..-...++|+. |...+. +...++.|.++|..+ .+.+.++...... -..+ ..+|++++|.+.
T Consensus 390 g~g~~~~~p~~--------g~v~~t--~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g-~~~i-~~~p~~~~l~v~ 457 (567)
T 1qks_A 390 GRGANFVHPTF--------GPVWAT--SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG-SLFI-KTHPNSQYLYVD 457 (567)
T ss_dssp TTCEEEEETTT--------EEEEEE--EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCE-ECCTTCSEEEEE
T ss_pred ccceeeECCCC--------CcEEEe--CCCCCCeEEEecCCCCCCccccCEEEEEEecCCCC-CEEE-EeCCCCCeEEEe
Confidence 00011134442 333331 123467899999987 4556666554322 2223 689999988874
Q ss_pred c----C----CcEEEEcCCCc
Q 016032 331 S----S----RSIFIWRPKEK 343 (396)
Q Consensus 331 ~----d----~~i~iw~~~~~ 343 (396)
. | +.|.|+|+.+.
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCcccCceEEEEECCcc
Confidence 4 2 59999999877
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.5e-15 Score=141.79 Aligned_cols=203 Identities=9% Similarity=-0.005 Sum_probs=130.4
Q ss_pred cccCCeEEEEecCCCCcEEEEEeC-CC----cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCe----
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDK-KG----QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT---- 88 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~---- 88 (396)
+|...+..++|||||. +||.+.. +| .|++||+.+++...... ....+..++|+|+ ++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--~~~~~~~~~wspD-g~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDGAKELPDVL--ERVKFSCMAWTHD-GKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTTTEEEEEEE--EEECSCCEEECTT-SSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCcccc--cCcccceEEEEeC-CCEEEEEEECCccccc
Confidence 3545688999999995 5554443 33 89999999987665432 2233778999999 888888877765
Q ss_pred ------------EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-----CCeEEEEeCCC----
Q 016032 89 ------------VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-----FGFLYLVDART---- 147 (396)
Q Consensus 89 ------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~g~i~i~d~~~---- 147 (396)
|++|++.+++....+..... .....+..+.|+|+|++|+.++. +..|++||+.+
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-----DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-----TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccC-----CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 99999988764322211111 00112678899999999988765 56899999976
Q ss_pred --CCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC----CcEEEEecCCCCCCCccccCCCC--CceeEEEEcCCCC
Q 016032 148 --NSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND----HFARIWDIRRLEAGSSLCDLPHK--RVVNSAYFSPSGS 219 (396)
Q Consensus 148 --~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~ 219 (396)
+..... ....+...+.. .|+| ++..|+..+.. +.|.+||+.+...........+. ..+..++|++++.
T Consensus 273 ~~~~~~~~--~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 273 ITGILKWV--KLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp SCSSCCCE--EEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE
T ss_pred cCCccceE--EeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE
Confidence 322112 22222223333 4777 77766665543 36999998764321111112332 3678889987777
Q ss_pred EEEEEeCCCcEEEE
Q 016032 220 KILTTSQDNRLRIW 233 (396)
Q Consensus 220 ~l~~~~~d~~i~iw 233 (396)
++++...++..+||
T Consensus 349 lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 349 LVLCYLHDVKNTLQ 362 (710)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEEECCEEEEE
Confidence 78888777754443
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=1.7e-15 Score=128.96 Aligned_cols=269 Identities=8% Similarity=-0.010 Sum_probs=177.1
Q ss_pred CCCcEEEeecccceeeeEecC-----CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCc
Q 016032 41 KKGQVGVWDFYKVSEKIVYGN-----IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRT 115 (396)
Q Consensus 41 ~dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 115 (396)
.++.|.++|..+++....+.. ........+.+.. +..+++...++.|.+||..+++.+..+...
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~~--------- 83 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRITGF--------- 83 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEECC---------
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcCCC---------
Confidence 378999999998775544311 1234467787753 566666677899999999999988777422
Q ss_pred ceeeeEEEeCCCCCEEEEEe-cCCeEEEEeCCCCCCCccceeeec---CCccEEEEEeccCCCCEEEEee-CCCcEEEEe
Q 016032 116 WRMLYGMDINPEKGVVLVAD-NFGFLYLVDARTNSRSGEAILIHR---KGSKVVGLHCNPIQPELLLSCG-NDHFARIWD 190 (396)
Q Consensus 116 ~~~v~~~~~~~~~~~l~~~~-~~g~i~i~d~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd 190 (396)
..+..+++++++. ++++. .++.|.+||+.+++..... .... .......+++ . ++.++++.. .++.|.++|
T Consensus 84 -~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i-~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 84 -TSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYI-ECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp -SSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEE-ECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEE
T ss_pred -CCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEE-EcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEE
Confidence 1278889988884 55554 7899999999886544322 1111 0013445666 3 556555554 488999999
Q ss_pred cCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC----------CcEEEEEcccccccCCCcceeecccccccCCce
Q 016032 191 IRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD----------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPF 260 (396)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (396)
+.+.+....+. .......++++|+|++++++..+ +.|.++|..+++.... ........+.
T Consensus 159 ~~t~~~~~~i~---~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~-------~~~~~g~~p~ 228 (328)
T 3dsm_A 159 TETDKVVDELT---IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ-------FKFKLGDWPS 228 (328)
T ss_dssp TTTTEEEEEEE---CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE-------EECCTTCCCE
T ss_pred CCCCeEEEEEE---cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE-------EecCCCCCce
Confidence 98755433332 23345788999999977776654 7899999988765321 1111112455
Q ss_pred eEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhh-hcCCCCCCCcceeeecc-CCcEEEee----c-CC
Q 016032 261 RAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAE-VMDPNITTISPVNKLHP-RDDVLASG----S-SR 333 (396)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~l~sg----~-d~ 333 (396)
.++++|+ ++++.. .. +.|.+||..+++.... +..........+ +++| ++.++++. . ++
T Consensus 229 ~la~~~d---------~~~lyv---~~--~~v~~~d~~t~~~~~~~~~~~~~~~p~gi-~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 229 EVQLNGT---------RDTLYW---IN--NDIWRMPVEADRVPVRPFLEFRDTKYYGL-TVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp EEEECTT---------SCEEEE---ES--SSEEEEETTCSSCCSSCSBCCCSSCEEEE-EECTTTCCEEEEECTTSSSEE
T ss_pred eEEEecC---------CCEEEE---Ec--cEEEEEECCCCceeeeeeecCCCCceEEE-EEcCCCCeEEEEcccccccCC
Confidence 7889987 444431 12 1799999988876432 111112345556 8999 67777776 5 79
Q ss_pred cEEEEcCCCcceeeeccc
Q 016032 334 SIFIWRPKEKSELVEQKE 351 (396)
Q Consensus 334 ~i~iw~~~~~~~~~~~~~ 351 (396)
.|.+|+.. ++.+..+..
T Consensus 294 ~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 294 IVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp EEEEECTT-CCEEEEEEE
T ss_pred EEEEECCC-CCEEEEEEe
Confidence 99999998 888887754
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=5.7e-14 Score=127.27 Aligned_cols=324 Identities=10% Similarity=0.008 Sum_probs=198.5
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecc--cceeeeEecCCcccceeEEEEe----cCCCcEEE
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFY--KVSEKIVYGNIHSCIVNNIRFN----PTNDGTVY 81 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~ 81 (396)
.+...+..+.. ...+..+.|+|+| ++|++++.|+.|.+||+. +.+....+. .......++|+ |+ +++++
T Consensus 185 ~t~~v~~~i~~-g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~--~G~~P~~ia~s~~~~pD-Gk~l~ 259 (567)
T 1qks_A 185 STYEIKTVLDT-GYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIK--IGSEARSIETSKMEGWE-DKYAI 259 (567)
T ss_dssp TTCCEEEEEEC-SSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEE--CCSEEEEEEECCSTTCT-TTEEE
T ss_pred CCCeEEEEEeC-CCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEe--cCCCCceeEEccccCCC-CCEEE
Confidence 33444444442 2356789999999 678888899999999995 666666554 23456899999 68 77776
Q ss_pred EEe-CCCeEEEEECCCCcccceeecCCCCCCCC--CcceeeeEEEeCCCCCEEEE-EecCCeEEEEeCCCCCCCccceee
Q 016032 82 AAS-SDGTVSCTDLETGLALSLMNVNPNGWHGP--RTWRMLYGMDINPEKGVVLV-ADNFGFLYLVDARTNSRSGEAILI 157 (396)
Q Consensus 82 s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~-~~~~g~i~i~d~~~~~~~~~~~~~ 157 (396)
+++ .+++|.++|..+.+.+..+.......... .....+..+..++++..+++ ....|.|.++|........ . ..
T Consensus 260 v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v-~~ 337 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-T-TE 337 (567)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-E-EE
T ss_pred EEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-e-ee
Confidence 655 46999999999998887776432111100 00113677888888665544 4566999999987654221 1 11
Q ss_pred ecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCCCCcccc---CCCCCceeEEEEcCCCCEE-EEEe-CCCcEE
Q 016032 158 HRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEAGSSLCD---LPHKRVVNSAYFSPSGSKI-LTTS-QDNRLR 231 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l-~~~~-~d~~i~ 231 (396)
...+.....+.|+| ++++++++. .++.|.++|+.+.+....+.. ..|.+.-..+ ++|++..+ +++. .++.|.
T Consensus 338 i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vs 415 (567)
T 1qks_A 338 ISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVA 415 (567)
T ss_dssp EECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEE
T ss_pred eeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEE
Confidence 12233577889999 888776554 678999999987665444433 1243222222 68875544 4443 468999
Q ss_pred EEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc----ccceEEEEcCcc-----ch
Q 016032 232 IWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA----LHPIDFIDITTG-----QL 302 (396)
Q Consensus 232 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~----d~~i~vwd~~~~-----~~ 302 (396)
++|..+++...............+ ...+-+..+|+ ++++........ .++|.|+|+.+. ..
T Consensus 416 vid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~---------~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~ 485 (567)
T 1qks_A 416 LIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPN---------SQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP 485 (567)
T ss_dssp EEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTT---------CSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred EecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCC---------CCeEEEecCCCCCcccCceEEEEECCcccccccCC
Confidence 999987332100001111111111 12234566777 555543222222 468999999876 21
Q ss_pred h-hhhc-------CCCCCCCcceeeeccCCcEEEee--c----CCcEEEEcCCCcceeeeccc
Q 016032 303 V-AEVM-------DPNITTISPVNKLHPRDDVLASG--S----SRSIFIWRPKEKSELVEQKE 351 (396)
Q Consensus 303 ~-~~~~-------~~~~~~i~~~~~~~~~~~~l~sg--~----d~~i~iw~~~~~~~~~~~~~ 351 (396)
. ..+. ......+..+ .|+|+|+.+..+ + ++.|.|+|..+++++..++.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQG-EFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEE-EECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CcEEeccccccccCCCCcceEee-eECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 1 1111 1112334455 799999876654 2 59999999999998888774
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.69 E-value=5.7e-16 Score=135.84 Aligned_cols=197 Identities=12% Similarity=0.067 Sum_probs=128.5
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeE-------------------EEEecCCCcEEEEE
Q 016032 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNN-------------------IRFNPTNDGTVYAA 83 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~l~s~ 83 (396)
...+.|+|+| +.|+.++.++.|++||+.+++..... ..+...... +.|+|+ ++.++.+
T Consensus 83 ~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spd-g~~~~~~ 159 (396)
T 3c5m_A 83 TFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIY-TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPL-TSWEKFA 159 (396)
T ss_dssp TTTCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEE-ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC-CSHHHHH
T ss_pred cccceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEE-ecccccCCCCCEEEeccCCccccccccccccCCC-Ccceeee
Confidence 3348899999 57888888889999999887655444 223322222 345676 5555443
Q ss_pred -----eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecC------CeEEEEeCCCCCCC
Q 016032 84 -----SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNF------GFLYLVDARTNSRS 151 (396)
Q Consensus 84 -----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~------g~i~i~d~~~~~~~ 151 (396)
..+..|.+||+.+++........ ..+..+.|+| ++..|+..+.+ ..|++||+......
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~~~~~~----------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~ 229 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEVIHQDT----------AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR 229 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEEEEEES----------SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE
T ss_pred eeccCCCcceEEEEECCCCcEEeeccCC----------cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee
Confidence 35678999999988765444221 1278899999 78877766543 36888998654321
Q ss_pred ccceeeecCCccEEEEEeccCCCCEEEEeeCC-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcC-CCCEEEEEe
Q 016032 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP-SGSKILTTS 225 (396)
Q Consensus 152 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 225 (396)
.+ ........+..++|+| +++.|+.++.+ +.|++||+.+++... +... .. .. +.|+| +|+++++++
T Consensus 230 -~l-~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~--~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 230 -KI-KEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVM--PP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp -ES-SCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEEC--CS-EE-EEEECSSSSEEEEEE
T ss_pred -Ee-eccCCCccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeC--CC-CC-CCccCCCCceEEEec
Confidence 11 1111123578899999 88877766543 449999997654322 2211 11 23 89999 999888754
Q ss_pred ----------------CCCcEEEEEcccccc
Q 016032 226 ----------------QDNRLRIWDSIFGNL 240 (396)
Q Consensus 226 ----------------~d~~i~iwd~~~~~~ 240 (396)
.+..|.+||+.+++.
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 302 CDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCcceeeccccccccCCCCcEEEEecccCce
Confidence 347899999987764
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=9.8e-15 Score=137.30 Aligned_cols=285 Identities=10% Similarity=-0.061 Sum_probs=166.9
Q ss_pred ecCCCCcEEEEEeCCC--cEEEeec--ccceeeeEec-----CCcccceeEEEEecCCCcEEEE-----EeCCCeEEEEE
Q 016032 28 FHPTNNHILLSGDKKG--QVGVWDF--YKVSEKIVYG-----NIHSCIVNNIRFNPTNDGTVYA-----ASSDGTVSCTD 93 (396)
Q Consensus 28 ~~~~~~~~l~s~~~dg--~i~iwd~--~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s-----~~~dg~v~iwd 93 (396)
.+|+|.+++.+....+ .-.||-. ..+.....+. .+|...+..++|+|+ +++|+. |+.+..|++||
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPD-G~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWD-GKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTT-SSEEEEEEEETTCSCCEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCC-CCEEEEEECCCCCceEEEEEEE
Confidence 3478855444443332 3445544 3443333221 246667999999999 887773 33456899999
Q ss_pred CCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCe-------------EEEEeCCCCCCCccce-eeec
Q 016032 94 LETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF-------------LYLVDARTNSRSGEAI-LIHR 159 (396)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~-------------i~i~d~~~~~~~~~~~-~~~~ 159 (396)
+.+++.+....... .....++|+|+|+.|+.++.+.. |++|++.++.....++ ....
T Consensus 154 l~tg~~~~~~~~~~---------~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 154 VDSGEWSKVDVIEG---------GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp TTTCCBCSSCCBSC---------CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred CCCCCCcCCcccCc---------ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 99988641111110 00257899999999999987765 9999998865322221 1222
Q ss_pred CCccEEEEEeccCCCCEEEEeeCCC----cEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe---CCCcEEE
Q 016032 160 KGSKVVGLHCNPIQPELLLSCGNDH----FARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS---QDNRLRI 232 (396)
Q Consensus 160 ~~~~i~~~~~~~~~~~~l~~~~~d~----~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~i~i 232 (396)
+...+..+.|+| ++++|+.++.++ .|++|+..+.+. ..+ ..+...+....+ ++|.+++.+. .++.|.+
T Consensus 225 ~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l--~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 225 DPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDF-RLL--VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp CTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSC-EEE--EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEE
T ss_pred CCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCce-EEe--ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEE
Confidence 334688999999 898888777655 677776543221 122 234445566666 5566444444 2578999
Q ss_pred EEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC-ccchhhhhcCCCC
Q 016032 233 WDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT-TGQLVAEVMDPNI 311 (396)
Q Consensus 233 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~-~~~~~~~~~~~~~ 311 (396)
||+.++.... ...+.... . ......+.|+ + +.+++ +...++..+||.+. +++....+..+..
T Consensus 300 ~d~~~~~~~~-~~~l~~~~-~--~~~l~~~~~~-~---------~~lv~---~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 362 (695)
T 2bkl_A 300 VDPAKPARAS-WKEIVPED-S--SASLLSVSIV-G---------GHLSL---EYLKDATSEVRVATLKGKPVRTVQLPGV 362 (695)
T ss_dssp EBTTBCSGGG-CEEEECCC-S--SCEEEEEEEE-T---------TEEEE---EEEETTEEEEEEEETTCCEEEECCCSSS
T ss_pred EeCCCCCccC-CeEEecCC-C--CCeEEEEEEE-C---------CEEEE---EEEECCEEEEEEEeCCCCeeEEecCCCC
Confidence 9997764210 01111100 0 0001123333 1 44444 45667777776554 3554555554433
Q ss_pred CCCcceeeeccCCcEEEe----ec-CCcEEEEcCCCcce
Q 016032 312 TTISPVNKLHPRDDVLAS----GS-SRSIFIWRPKEKSE 345 (396)
Q Consensus 312 ~~i~~~~~~~~~~~~l~s----g~-d~~i~iw~~~~~~~ 345 (396)
..+..+ +++|++..|+. .. .+.|++||+.+++.
T Consensus 363 ~~v~~~-~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 363 GAASNL-MGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp SEECCC-BSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eEEEEe-ecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 555656 78999876663 22 48999999988763
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=8.7e-15 Score=125.90 Aligned_cols=258 Identities=9% Similarity=0.069 Sum_probs=158.3
Q ss_pred CCeEEEEecCCCCcEEEEE--------eCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC---C--
Q 016032 21 RRVTCLEFHPTNNHILLSG--------DKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD---G-- 87 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g-- 87 (396)
..+...++ +|.+++++. ..++.|.+||+.++..... ..+..++|+|+ ++.|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l------~~~~~~~~SpD-g~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI------ENATMPRISPD-GKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE------ESCEEEEECTT-SSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc------ccCCCeEECCC-CCEEEEEEeccCCCcc
Confidence 35677778 775444432 1256799999988764332 56889999999 8888776643 3
Q ss_pred eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC---------------------------CeE
Q 016032 88 TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF---------------------------GFL 140 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------------------g~i 140 (396)
.|.+|++.+++.......+ . +..++|+|+++.|+.++.+ ..|
T Consensus 86 ~l~~~~~~~g~~~~l~~~~----------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK----------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EEEEEETTTTEEEEEEEES----------E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEE
T ss_pred eEEEEECCCCceEEEEcCC----------C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 4888888887665443221 2 7789999999999888642 579
Q ss_pred EEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCC-------cEEEEecCCCCCCCccccCCCCCceeEEE
Q 016032 141 YLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDH-------FARIWDIRRLEAGSSLCDLPHKRVVNSAY 213 (396)
Q Consensus 141 ~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~~~i~~~~ 213 (396)
++||+.+++....+ .. . .+..++|+| ++ +++++..+. ...||.+.+.+ ...+. .+ ..+..+
T Consensus 155 ~~~d~~~~~~~~~l-~~---~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~--~~-~~~~~~- 222 (347)
T 2gop_A 155 WIFDTESEEVIEEF-EK---P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMF--EK-VSFYAV- 222 (347)
T ss_dssp EEEETTTTEEEEEE-EE---E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEE--EE-ESEEEE-
T ss_pred EEEECCCCeEEeee-cC---C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCc-eEEec--cC-cceeeE-
Confidence 99999876542221 11 2 577899999 88 777775542 34455443222 12221 23 344443
Q ss_pred EcCCCCEEEEEeCC--------CcEEEEEcccccccCCCcceeecccccccCCcee-EEeCCCCCCCceeeEeeeeeeec
Q 016032 214 FSPSGSKILTTSQD--------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFR-AEWDPKDPSESLAVIGRYISENY 284 (396)
Q Consensus 214 ~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~ 284 (396)
+|+|+.|+.++.+ ..|.+|| +++..... .... ..... +.|+ + | +++
T Consensus 223 -spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~------~~~~--~~~~~~~~~s-d---------g-~~~--- 277 (347)
T 2gop_A 223 -DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL------DEVD--RGVGQAKIKD-G---------K-VYF--- 277 (347)
T ss_dssp -EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS------TTCC--SEEEEEEEET-T---------E-EEE---
T ss_pred -CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc------ccCC--cccCCccEEc-C---------c-EEE---
Confidence 9999998877754 3677777 44321110 0001 11112 6677 5 6 444
Q ss_pred ccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcE-EEEcCC
Q 016032 285 NGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSI-FIWRPK 341 (396)
Q Consensus 285 ~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i-~iw~~~ 341 (396)
++..++.++|| +.+++.. .+..+ ...+..+ +|+| .++++++ ++.. .||.+.
T Consensus 278 ~~~~~~~~~l~-~~~g~~~-~~~~~-~~~v~~~-~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDGEIK-PIAKG-RHWIMGF-DVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEETTEEEEE-EESSSEE-EEECS-SSEEEEE-EESS--SEEEEEECSSSCCEEEEES
T ss_pred EEecCCcEEEE-EcCCceE-EEecC-CCeEEee-eeeC--cEEEEEcCCCChHHheEeC
Confidence 56777889999 8766543 33333 3556666 7888 5666655 5443 666665
No 185
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.68 E-value=6.5e-13 Score=111.56 Aligned_cols=282 Identities=8% Similarity=-0.046 Sum_probs=183.0
Q ss_pred ccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 17 RYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 17 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
......+.++++.++| +++++...++.|.+||.. +.........+...+..+++.++ +.++++...++.|..||..
T Consensus 16 ~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSL-GDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp SSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECTT-
T ss_pred CCCCCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCC-CCEEEEecCCCeEEEECCC-
Confidence 3455688999999998 567766678899999988 44333222334467899999988 7777776668899999987
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCE
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 176 (396)
++.. .+...... ..+.++++.+++.++++...++.|..+|.. +... . .........+..+++.+ ++++
T Consensus 92 g~~~-~~~~~~~~-------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~-~~~~~~~~~~~~i~~d~-~g~l 159 (300)
T 2qc5_A 92 GGFT-EYPLPQPD-------SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-E-YDLPNKGSYPAFITLGS-DNAL 159 (300)
T ss_dssp SCEE-EEECSSTT-------CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-E-EECSSTTCCEEEEEECT-TSSE
T ss_pred CCeE-EecCCCCC-------CCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-E-ccCCCCCCCceeEEECC-CCCE
Confidence 5542 33222111 237899999999988877778899999987 3322 1 11222334688999999 8887
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeeccccccc
Q 016032 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRH 256 (396)
Q Consensus 177 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 256 (396)
+++...++.|..+|. +.+.. .+........+..++++++|.++++....+.|.+|+. +++... .. .....
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~----~~---~~~~~ 229 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE----YD---IPTPN 229 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE----EE---CSSTT
T ss_pred EEEecCCCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE----EE---CCCCC
Confidence 777766788999997 32221 1221133456889999999987777666778999998 443211 00 00112
Q ss_pred CCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc-CCCCCCCcceeeeccCCcEEEeecCCcE
Q 016032 257 LTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM-DPNITTISPVNKLHPRDDVLASGSSRSI 335 (396)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~sg~d~~i 335 (396)
..+..+.++++ |++.+ +...++.|..|+. +++.. .+. ......+.++ +++++|.+.++... .|
T Consensus 230 ~~~~~i~~d~~---------g~l~v---~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i-~~~~~g~l~v~~~~-~i 293 (300)
T 2qc5_A 230 ARPHAITAGKN---------SEIWF---TEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGI-TFGKDGSVWFALKC-KI 293 (300)
T ss_dssp CCEEEEEECST---------TCEEE---EETTTTEEEEECT-TSCEE-EEECCSTTCCCCCE-EECTTSCEEEECSS-EE
T ss_pred CCceEEEECCC---------CCEEE---eccCCCeEEEECC-CCcEE-EEECCccCCcccee-EeCCCCCEEEEccC-ce
Confidence 33456777776 44433 2334677889987 44432 221 1122456666 78899987776554 66
Q ss_pred EEEcC
Q 016032 336 FIWRP 340 (396)
Q Consensus 336 ~iw~~ 340 (396)
..+++
T Consensus 294 ~~~~p 298 (300)
T 2qc5_A 294 GKLNL 298 (300)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 66665
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=7.2e-14 Score=115.61 Aligned_cols=242 Identities=7% Similarity=-0.003 Sum_probs=160.4
Q ss_pred CeEEEEecCCCCcEEE-EEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 22 RVTCLEFHPTNNHILL-SGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
...+++++|++ ++++ +...++.|.+|+..+....... ..+...+.++++.++ +.++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECC-CCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEe-eCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCCCceEe
Confidence 78899999998 5666 5467889999998665433222 234456889999998 77666655 889999998765432
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEe
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC 180 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 180 (396)
.+.... ...+..++++++++.+++...++.|.+|+..+..... ........+.++++++ +++++++.
T Consensus 101 -~~~~~~--------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~-~g~l~v~~ 167 (270)
T 1rwi_B 101 -VLPFDG--------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDN-SGNVYVTD 167 (270)
T ss_dssp -ECCCCS--------CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---CCCCSCCSCCCEEECT-TCCEEEEE
T ss_pred -eeecCC--------cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---eccccCCCceeEEEeC-CCCEEEEE
Confidence 221111 1227899999999977777788999999765533211 1111222577899999 88888777
Q ss_pred eCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCce
Q 016032 181 GNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPF 260 (396)
Q Consensus 181 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (396)
..++.|.+||....... .........+..++++++|.++++...++.|.+|+........ ........+.
T Consensus 168 ~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~p~ 237 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQV--VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--------LPFTGLNTPL 237 (270)
T ss_dssp GGGTEEEEECTTTCCEE--ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--------CCCCSCSCEE
T ss_pred CCCCEEEEEecCCCceE--eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--------eccCCCCCce
Confidence 77889999998653321 1111233668899999999777777778899999986543211 1111123355
Q ss_pred eEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccch
Q 016032 261 RAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 261 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~ 302 (396)
.++++++ |++.+ +...++.|+++++...+.
T Consensus 238 ~i~~~~~---------g~l~v---~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 238 AVAVDSD---------RTVYV---ADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEECTT---------CCEEE---EEGGGTEEEEECCCGGGS
T ss_pred eEEECCC---------CCEEE---EECCCCEEEEEcCCCccc
Confidence 7788887 55444 456788999999876554
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=3.4e-13 Score=115.26 Aligned_cols=209 Identities=10% Similarity=0.062 Sum_probs=144.7
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC----Ce
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD----GT 88 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----g~ 88 (396)
...+.++...+.+++|+|++ ++++++..++.|.+||..++...... ..+...+.+++|+|+ +.++++...+ +.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHKD-GRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECTT-SCEEEEECTTSSSCCE
T ss_pred eEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEe-eCCCCCcceEEECCC-CcEEEEeCCCCCCCce
Confidence 34566677788999999998 57788888999999999877655443 235678999999999 7777776666 68
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeecCCc
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHRKGS 162 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~~~~ 162 (396)
|.+||..++.....+..... ...+..++++|+++++++... .+.|..++...+... . ......
T Consensus 114 i~~~d~~~~~~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~ 182 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLST-------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-P---IIQNIS 182 (333)
T ss_dssp EEEECTTSCSCEEEECSSSS-------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-E---EEEEES
T ss_pred EEEEeCCCCEEEEEEccCcc-------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE-E---eecCCC
Confidence 99999887765433221110 123889999999987776653 356777776543321 1 111122
Q ss_pred cEEEEEeccCCCCEE-EEeeCCCcEEEEecCCC-CCCCc-----cccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 163 KVVGLHCNPIQPELL-LSCGNDHFARIWDIRRL-EAGSS-----LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l-~~~~~d~~i~~wd~~~~-~~~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
.+..++|+| +++.+ ++.+.++.|++||+.+. ..... .........+..++++++|+++++...++.|.+||.
T Consensus 183 ~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 183 VANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred cccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 478899999 88755 55556789999998632 11111 111111246788999999998888777889999998
Q ss_pred c
Q 016032 236 I 236 (396)
Q Consensus 236 ~ 236 (396)
.
T Consensus 262 ~ 262 (333)
T 2dg1_A 262 R 262 (333)
T ss_dssp T
T ss_pred C
Confidence 4
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=2e-14 Score=135.26 Aligned_cols=253 Identities=8% Similarity=-0.055 Sum_probs=153.4
Q ss_pred cccCCeEEEEecCCCCcEEE-E----EeCCCcEEEeecccceee-eEecCCcccceeEEEEecCCCcEEEEEeCCCe---
Q 016032 18 YHSRRVTCLEFHPTNNHILL-S----GDKKGQVGVWDFYKVSEK-IVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT--- 88 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~-s----~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--- 88 (396)
+|...+.+++|||||. +|| + |+.+..|++||+.+++.. .... .......++|+|+ ++.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~~~~~~~~wspD-g~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI--EGGKYATPKWTPD-SKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSSCCB--SCCTTCCCEECTT-SSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCCccc--CcccccceEEecC-CCEEEEEEecCCCCC
Confidence 4666799999999995 555 3 334567999999988754 2111 1111268999999 888888888766
Q ss_pred ----------EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC----eEEEEeCCCCCCCccc
Q 016032 89 ----------VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG----FLYLVDARTNSRSGEA 154 (396)
Q Consensus 89 ----------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g----~i~i~d~~~~~~~~~~ 154 (396)
|++|++.+++....+..... .....+..+.|+|+|++|+.++.++ .|++++...+.. .
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~-----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~--~- 265 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERT-----GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF--R- 265 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCC-----CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC--E-
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecC-----CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce--E-
Confidence 99999998764322211111 0111277899999999998887665 777776654321 1
Q ss_pred eeeecCCccEEEEEeccCCCCEEEEee---CCCcEEEEecCCCCCC--CccccCCCCCceeEEEEcCCCCEEEEEeCCCc
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLSCG---NDHFARIWDIRRLEAG--SSLCDLPHKRVVNSAYFSPSGSKILTTSQDNR 229 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 229 (396)
....+...+....+ + ++.+++... .++.|.+||+.+.+.. ..+........+..++|+ ++.++++...|+.
T Consensus 266 -~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 266 -LLVKGVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp -EEEECSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred -EeecCCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 22222224455556 4 455444444 2578999998764321 122111124568888998 6778888889998
Q ss_pred EEEEEcc-cccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeee-cccccccceEEEEcCccch
Q 016032 230 LRIWDSI-FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISEN-YNGAALHPIDFIDITTGQL 302 (396)
Q Consensus 230 i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~d~~i~vwd~~~~~~ 302 (396)
.+||.+. +++... ...+........+.++|+. ..++.. .+....++|++||+.+++.
T Consensus 342 ~~l~~~~~~g~~~~-------~l~~~~~~~v~~~~~s~d~---------~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 342 SEVRVATLKGKPVR-------TVQLPGVGAASNLMGLEDL---------DDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEETTCCEEE-------ECCCSSSSEECCCBSCTTC---------SEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEEEeCCCCeeE-------EecCCCCeEEEEeecCCCC---------CEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8888765 232211 1111111111234566652 222211 1455678899999988763
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=7.2e-14 Score=118.91 Aligned_cols=250 Identities=8% Similarity=-0.037 Sum_probs=169.4
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
.....+++.. .+++++...++.|.+||..+++....+. .......++++++ +..+++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEE
Confidence 3467787754 3677777778999999999988877763 4567899999988 655455448999999999999887
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe--cCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD--NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+...... +. ......+++ ++..++++. .++.|.++|+.+++..... . .+.....++++| ++++++
T Consensus 119 ~~i~~g~~~--~~--~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i-~---~g~~p~~i~~~~-dG~l~v 187 (328)
T 3dsm_A 119 GYIECPDMD--ME--SGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDEL-T---IGIQPTSLVMDK-YNKMWT 187 (328)
T ss_dssp EEEECTTCC--TT--TCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEE-E---CSSCBCCCEECT-TSEEEE
T ss_pred EEEEcCCcc--cc--CCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEE-E---cCCCccceEEcC-CCCEEE
Confidence 776654310 00 011455666 445555554 4889999999987654322 1 122456788999 888777
Q ss_pred EeeCC----------CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCccee
Q 016032 179 SCGND----------HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIV 248 (396)
Q Consensus 179 ~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 248 (396)
++..+ +.|.++|..+.+....+. ......+..++|+|+++.|+++.. .|.+||..+++.... ...
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~--~~~ 262 (328)
T 3dsm_A 188 ITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR--PFL 262 (328)
T ss_dssp EBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS--CSB
T ss_pred EECCCccCCccccCCceEEEEECCCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeee--eee
Confidence 77654 789999987655433332 122346899999999999988765 899999988876321 111
Q ss_pred ecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccc----ccccceEEEEcCccchhhhhc
Q 016032 249 HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNG----AALHPIDFIDITTGQLVAEVM 307 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g----~~d~~i~vwd~~~~~~~~~~~ 307 (396)
.. ....+..++++|+. +++.+ +. ..++.|.+||.. |+.+.++.
T Consensus 263 ~~----~~~~p~gi~vdp~~--------g~lyv---a~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 263 EF----RDTKYYGLTVNPNN--------GEVYV---ADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp CC----CSSCEEEEEECTTT--------CCEEE---EECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred cC----CCCceEEEEEcCCC--------CeEEE---EcccccccCCEEEEECCC-CCEEEEEE
Confidence 00 12345678888854 33333 23 457889999997 88777664
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=2.3e-14 Score=118.37 Aligned_cols=188 Identities=10% Similarity=0.041 Sum_probs=140.9
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcc-cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHS-CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHG 112 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 112 (396)
++|++++.++.|.+||..+++.+..+.. +. ..+.++.+.|+ +++++ +.++.|..||. +++.+..+..+..
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~---- 76 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNIAAPAG---- 76 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEEECCTT----
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCC-CccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEEcCCCC----
Confidence 5899999999999999989998888743 33 57899999999 88877 45788999999 7888888765321
Q ss_pred CCcceeeeEEEeCCCCCEEEEEec-CCeEEEEeCCCCCCCccceeee---cCCccEEEEEeccCCCCEEEEeeCCCcEEE
Q 016032 113 PRTWRMLYGMDINPEKGVVLVADN-FGFLYLVDARTNSRSGEAILIH---RKGSKVVGLHCNPIQPELLLSCGNDHFARI 188 (396)
Q Consensus 113 ~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~i~d~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~ 188 (396)
..+.++.+.++|+.+++.+. ++.+..+|. .++...+..... ........++..+ +++++++...++.|..
T Consensus 77 ----~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 77 ----CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVRE 150 (276)
T ss_dssp ----CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEE
T ss_pred ----ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEE
Confidence 12788899999999999887 788888886 444332221110 0111344566788 8999999999999999
Q ss_pred EecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 189 WDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 189 wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
||.. ++. +..+.....+.++.+.++|+++++++.++.|..+|..+|+.
T Consensus 151 ~d~~-G~~---~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 151 IAPN-GQL---LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp ECTT-SCE---EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred ECCC-CCE---EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 9985 443 33333334567788889999999888888899999887765
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.65 E-value=3.5e-13 Score=116.28 Aligned_cols=294 Identities=11% Similarity=-0.065 Sum_probs=179.5
Q ss_pred EecCCCCcEEEEEeC--CC---cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----------CCCeEEE
Q 016032 27 EFHPTNNHILLSGDK--KG---QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----------SDGTVSC 91 (396)
Q Consensus 27 ~~~~~~~~~l~s~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~i 91 (396)
...|++ +++++... .. .|.++|..+++....+..+ ..+ .++++|+ +++++.+. .++.|.+
T Consensus 27 ~~~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p--~i~~spD-g~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 27 APGADG-RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP--NPVAAHS-GSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred cCCCCC-CEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC--CeEECCC-CCEEEEEeccccccccCCCCCeEEE
Confidence 345677 44555442 33 7899999998877666432 223 9999999 88887775 3678999
Q ss_pred EECCCCcccceeecC-CCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEE
Q 016032 92 TDLETGLALSLMNVN-PNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLH 168 (396)
Q Consensus 92 wd~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~ 168 (396)
||..+.+.+..+... ....... .....++++|+|++|++++. ++.|.++| .+++..... ..... ++.
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g---~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~---i~~~~---~~~ 171 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVG---PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQL---LSSPT---CYH 171 (373)
T ss_pred EECCCCcEEEEEECCCccccccC---CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEE---cCCCc---eEE
Confidence 999998888777654 1110000 11457899999999999874 47899999 887654320 11111 234
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCCCCccc---cCCCCCc-eeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEAGSSLC---DLPHKRV-VNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~-i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
+.|.....+++.+.||.+.++|. +.+...... .+....+ .....+.+++..++..+..+.+.+.|+..+.... .
T Consensus 172 ~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~ 249 (373)
T 2mad_H 172 IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN-K 249 (373)
T ss_pred EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE-e
Confidence 45534466777788999999998 544321111 0011112 2335567766555555578899999997543210 0
Q ss_pred cceeeccc--ccc---cCCceeEEeCCCCCCCceeeEeeeeeeecc-c------ccccceEEEEcCccchhhhhcCCCCC
Q 016032 245 REIVHSHD--FNR---HLTPFRAEWDPKDPSESLAVIGRYISENYN-G------AALHPIDFIDITTGQLVAEVMDPNIT 312 (396)
Q Consensus 245 ~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g------~~d~~i~vwd~~~~~~~~~~~~~~~~ 312 (396)
..+..... ... ......+.++|+. ..+..... + ...+.|.++|+.+++.+.++....
T Consensus 250 ~~~~~~~~~~~~~~~~p~g~~~~~~s~d~---------~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-- 318 (373)
T 2mad_H 250 APIDALSGGRKADTWRPGGWQQVAYLKSS---------DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-- 318 (373)
T ss_pred eeeeecCCcccccceecCceEeEEECCCC---------CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC--
Confidence 00000000 000 0001124556652 22221100 1 124679999999999988886443
Q ss_pred CCcceeeeccCCc-EEEeec--CCcEEEEcCCCcceeeec
Q 016032 313 TISPVNKLHPRDD-VLASGS--SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 313 ~i~~~~~~~~~~~-~l~sg~--d~~i~iw~~~~~~~~~~~ 349 (396)
....+ +|+|||+ +++++. ++.|.+||+.+++.+..+
T Consensus 319 ~p~~i-~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 319 DVDAI-SVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CcCeE-EECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 45666 8999998 677755 799999999999988873
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=9e-14 Score=115.03 Aligned_cols=242 Identities=11% Similarity=0.043 Sum_probs=157.3
Q ss_pred ceeEEEEecCCCcEEE-EEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEe
Q 016032 66 IVNNIRFNPTNDGTVY-AASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVD 144 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d 144 (396)
...+++++++ +.+++ +...++.|.+|+..+...... .... ...+.+++++++++++++.. ++.|.+||
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~~~~i~~~~~~~~~~~~~-~~~~--------~~~p~~i~~~~~g~l~v~~~-~~~i~~~d 93 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTGTTVL-PFNG--------LYQPQGLAVDGAGTVYVTDF-NNRVVTLA 93 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSSSCEEEEECC-----EEC-CCCS--------CCSCCCEEECTTCCEEEEET-TTEEEEEC
T ss_pred CccceEECCC-CCEEEEccCCCCcEEEecCCCcccceE-eeCC--------cCCcceeEECCCCCEEEEcC-CCEEEEEe
Confidence 6788999998 77666 446788999999765543211 1110 01277899999998666655 88999999
Q ss_pred CCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEE
Q 016032 145 ARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT 224 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 224 (396)
........ ........+..+++.+ +++++++...++.|.+|+..+... ..........+..++++++|+++++.
T Consensus 94 ~~~~~~~~---~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~ 167 (270)
T 1rwi_B 94 AGSNNQTV---LPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGNVYVTD 167 (270)
T ss_dssp TTCSCCEE---CCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCCEEEEE
T ss_pred CCCceEee---eecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCCEEEEE
Confidence 87643221 1111223688999999 888888877788999997643221 11112233467889999999977777
Q ss_pred eCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhh
Q 016032 225 SQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA 304 (396)
Q Consensus 225 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~ 304 (396)
..++.|.+||......... .......+..++++++ |.+.+ +...++.|.+|+........
T Consensus 168 ~~~~~i~~~~~~~~~~~~~--------~~~~~~~p~~i~~d~~---------g~l~v---~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQVVL--------PFTDITAPWGIAVDEA---------GTVYV---TEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp GGGTEEEEECTTTCCEEEC--------CCSSCCSEEEEEECTT---------CCEEE---EETTTSCEEEECTTCSCCEE
T ss_pred CCCCEEEEEecCCCceEee--------cccCCCCceEEEECCC---------CCEEE---EECCCCcEEEEcCCCCccee
Confidence 7788999999876543210 1111133456778776 54444 34557789999986544322
Q ss_pred hhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCccee
Q 016032 305 EVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSEL 346 (396)
Q Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~ 346 (396)
+..........+ +++++|+++++.. ++.|+++++...+..
T Consensus 228 -~~~~~~~~p~~i-~~~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 228 -LPFTGLNTPLAV-AVDSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp -CCCCSCSCEEEE-EECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred -eccCCCCCceeE-EECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 222222445666 8999999888877 899999998876643
No 193
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.64 E-value=1.2e-13 Score=117.59 Aligned_cols=304 Identities=12% Similarity=0.036 Sum_probs=185.7
Q ss_pred EEecCCCCcEEEEEeC----CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----------CCCeEEE
Q 016032 26 LEFHPTNNHILLSGDK----KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----------SDGTVSC 91 (396)
Q Consensus 26 ~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~i 91 (396)
....|++.+++++-.. ++.|.+.|..+.+.+..+..+.. + . ++++|+ ++++++++ .++.|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spD-G~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADD-GSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C-E-EEECTT-SSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C-c-EEECCC-CCEEEEEcccccccccCCCCCEEEE
Confidence 4567888655555443 67999999999988877753333 3 4 999999 77776665 3678999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEe
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC 169 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (396)
||..+.+.+..+....... .........++++|+|++++++.. ++.|.++|+.+.+....+ .. .+ . .. .
T Consensus 114 iD~~t~~v~~~I~v~~g~r--~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v---~g-~-~~-~ 184 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPR--FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DV---PD-C-YH-I 184 (386)
T ss_dssp ECTTTCCEEEEEEETTCCC--CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-EC---CS-E-EE-E
T ss_pred EECCCCeEEEEEECCCccc--cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE-EC---CC-c-ce-e
Confidence 9999999988887643100 000012567899999999998864 689999999997765433 11 11 1 12 2
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCC-CCCCCcc-ccC-CCCCce-eEEEEc-CCCCEEEEEeCCCcEEEEEcccccc--cC
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRR-LEAGSSL-CDL-PHKRVV-NSAYFS-PSGSKILTTSQDNRLRIWDSIFGNL--DS 242 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~-~~~-~~~~~i-~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~--~~ 242 (396)
.|.....+++.+.||.+.+.++.. ++..... ..+ ....++ ....|. ++|++++ .+.+|.|.+.|+.++.. ..
T Consensus 185 ~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 185 FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECC
T ss_pred ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeec
Confidence 242556677778888888888865 2221100 011 111222 224664 5776555 55589999999976542 11
Q ss_pred CCcceee---ccccc-ccCCceeEEeCCCCCCCceeeEeeeeeeecccc---cccceEEEEcCccchhhhhcCCCCCCCc
Q 016032 243 PSREIVH---SHDFN-RHLTPFRAEWDPKDPSESLAVIGRYISENYNGA---ALHPIDFIDITTGQLVAEVMDPNITTIS 315 (396)
Q Consensus 243 ~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~---~d~~i~vwd~~~~~~~~~~~~~~~~~i~ 315 (396)
+...... ...+. ... ..+.++++.....+..... .-++ ..+.|.++|+.+++.+.++.... ...
T Consensus 264 ~~~~~~~~~~~~g~~p~g~--q~~a~~~~~~~lyV~~~~~-----~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~ 334 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGW--QQVAYHRALDRIYLLVDQR-----DEWRHKTASRFVVVLDAKTGERLAKFEMGH--EID 334 (386)
T ss_dssp CEESSCHHHHHTTEEECSS--SCEEEETTTTEEEEEEEEC-----CTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EEC
T ss_pred ceeccccccccccccCCCc--ceeeECCCCCeEEEEeccc-----cccccCCCCCEEEEEECCCCeEEEEEECCC--Ccc
Confidence 1110000 00000 000 1234455422111111000 0011 23679999999999998886543 455
Q ss_pred ceeeeccCCc-EEEee-c-CCcEEEEcCCCcceeeeccccc
Q 016032 316 PVNKLHPRDD-VLASG-S-SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 316 ~~~~~~~~~~-~l~sg-~-d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
.+ +++++++ +|++. . ++.|.++|..+++.+..++...
T Consensus 335 ~l-avs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 335 SI-NVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp EE-EECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred eE-EECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 66 8999996 66654 4 8999999999999998886643
No 194
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=3.1e-13 Score=115.18 Aligned_cols=215 Identities=11% Similarity=0.083 Sum_probs=147.5
Q ss_pred cccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce-eeeEec--------CCcccceeEEEEecCCCcEEEEEe-CCC
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS-EKIVYG--------NIHSCIVNNIRFNPTNDGTVYAAS-SDG 87 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~~~~~~l~s~~-~dg 87 (396)
++......++++|+| +++++...++.|++|+..... ....+. .++-.....++++|+++.++++.+ .++
T Consensus 88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 445678999999999 588888889999999987543 333332 234457899999994277778776 689
Q ss_pred eEEEEECCCCcccceeecCCCCC-CCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 88 TVSCTDLETGLALSLMNVNPNGW-HGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
.|++|+ ..+..+..+....... ........+..++++|+ +.++++...++.|++|+..+++..... ........+.
T Consensus 167 ~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~-~~~~~~~~~~ 244 (329)
T 3fvz_A 167 RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI-KHASFGRNVF 244 (329)
T ss_dssp EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CCTTTTTCEE
T ss_pred eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE-eccccCCCcc
Confidence 999999 4566655553221110 00112233789999998 677777778899999999866544322 2233445678
Q ss_pred EEEeccCCCCEEEEe-------eCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 166 GLHCNPIQPELLLSC-------GNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~-------~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.++++| +..+++. ..+..|++|+..+++....+.. ..+...+..++++|+|.++++...++.|++|++..
T Consensus 245 ~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 245 AISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 888887 3333333 2345899999876554333211 13556789999999998888888899999999864
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.60 E-value=1.7e-13 Score=118.70 Aligned_cols=293 Identities=12% Similarity=0.050 Sum_probs=182.5
Q ss_pred CCCCcEEEEEeCC----CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----------CCCeEEEEECC
Q 016032 30 PTNNHILLSGDKK----GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----------SDGTVSCTDLE 95 (396)
Q Consensus 30 ~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~iwd~~ 95 (396)
|++.+++++...+ +.|.++|..+.+.+..+..+. .+ .+.++|+ +++++++. .++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P--gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP--HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC--EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC--ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECC
Confidence 4554445554433 799999999998888875333 33 8999999 77776665 46789999999
Q ss_pred CCcccceeecC-CCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccC
Q 016032 96 TGLALSLMNVN-PNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
+++.+..+... ...+. .......+.++|++++++++.. ++.|.++|+.+.+....+.. . .. ....|.
T Consensus 158 t~~vv~~I~v~g~~r~~---~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v---~--g~--~~~~p~ 227 (426)
T 3c75_H 158 TFLPIADIELPDAPRFL---VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV---P--DC--YHIFPA 227 (426)
T ss_dssp TCCEEEEEEETTCCCCC---BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC---C--SE--EEEEEE
T ss_pred CCcEEEEEECCCccccc---cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc---C--Cc--eeeccC
Confidence 99998888764 11100 0011567899999999999874 57899999999776543211 1 11 223332
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCCc---cccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccccccc--CCCcce
Q 016032 173 QPELLLSCGNDHFARIWDIRRLEAGSS---LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLD--SPSREI 247 (396)
Q Consensus 173 ~~~~l~~~~~d~~i~~wd~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~ 247 (396)
....+++.+.||.+.+.+..+.+.... ............+.|.+++..++..+..+.+.+.|+..+... .+.. .
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~-~ 306 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIE-A 306 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEE-S
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeee-e
Confidence 335666667788887777743222100 001111111234578999888888888899999998654421 1100 0
Q ss_pred eecccccc---cCCceeEEeCCCCCCCceeeEeeeeeeec-c---cc---cccceEEEEcCccchhhhhcCCCCCCCcce
Q 016032 248 VHSHDFNR---HLTPFRAEWDPKDPSESLAVIGRYISENY-N---GA---ALHPIDFIDITTGQLVAEVMDPNITTISPV 317 (396)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~---g~---~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 317 (396)
........ ......+.++|+. ..+.... . ++ ..+.|.++|+.+.+.+.++.... ....+
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg---------~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~--~P~gi 375 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQS---------DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH--EIDSI 375 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGG---------TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEE
T ss_pred ccccccccccccCCceeeEEcCCC---------CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC--CcCeE
Confidence 00000000 0000124556652 2222110 0 11 24679999999999998886443 34555
Q ss_pred eeeccCCc-EEEeec--CCcEEEEcCCCcceeeec
Q 016032 318 NKLHPRDD-VLASGS--SRSIFIWRPKEKSELVEQ 349 (396)
Q Consensus 318 ~~~~~~~~-~l~sg~--d~~i~iw~~~~~~~~~~~ 349 (396)
+|+|+|+ ++++.. ++.|.++|+.+++.+..+
T Consensus 376 -a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 376 -NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp -EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 7999998 777765 799999999999999886
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.8e-13 Score=116.41 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=122.4
Q ss_pred CCeEEEEecCCCCcEEEEEeCC---C--cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC----------
Q 016032 21 RRVTCLEFHPTNNHILLSGDKK---G--QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS---------- 85 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---------- 85 (396)
..+.+++|+|+|. .|+..+.+ + .|.+|++.+++...... +.. +..++|+|+ ++.|+.++.
T Consensus 59 ~~~~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~-~~~~~wspd-g~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGK-KIAFMRANEEKKVSEIWVADLETLSSKKILE--AKN-IRSLEWNED-SRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSS-EEEEEEEETTTTEEEEEEEETTTTEEEEEEE--ESE-EEEEEECTT-SSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCC-EEEEEEeccCCCcceEEEEECCCCceEEEEc--CCC-ccceeECCC-CCEEEEEEccCCCcCCcEE
Confidence 4688899999995 56655543 3 37888888776555442 333 999999999 777777653
Q ss_pred -----------------CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC---------e
Q 016032 86 -----------------DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG---------F 139 (396)
Q Consensus 86 -----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g---------~ 139 (396)
...|.+||+.+++.+..+.. . . +..++|+|++ .++++..++ .
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~---------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~ 201 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R---------FSSGIWHRDK-IVVNVPHREIIPQYFKFWD 201 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T---------TCEEEEETTE-EEEEEECCCSSCCSSCCEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C---------cccccCCCCe-EEEEEeccccccccccccc
Confidence 25799999988876344432 1 1 7788999999 777765432 4
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC--------CcEEEEecCCCCCCCccccCCCCCceeE
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND--------HFARIWDIRRLEAGSSLCDLPHKRVVNS 211 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~i~~ 211 (396)
|+++| ++. ... ...+ ..+..+ +| +++.|+.++.+ ..|++|| +.+. ..+ ...+...+..
T Consensus 202 l~~~d--~~~-~~~---l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l-~~~~~~~~~~ 267 (347)
T 2gop_A 202 IYIWE--DGK-EEK---MFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGI-LDEVDRGVGQ 267 (347)
T ss_dssp EEEEE--TTE-EEE---EEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EES-STTCCSEEEE
T ss_pred EEEeC--CCc-eEE---eccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--CCce-Eec-cccCCcccCC
Confidence 55555 322 111 1112 345544 88 88888777644 3688888 3222 111 1145667886
Q ss_pred -EEEcCCCCEEEEEeCCCcEEEEEccccc
Q 016032 212 -AYFSPSGSKILTTSQDNRLRIWDSIFGN 239 (396)
Q Consensus 212 -~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 239 (396)
+.|+ ++ ++++++.++.++|| +.+++
T Consensus 268 ~~~~s-dg-~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 268 AKIKD-GK-VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp EEEET-TE-EEEEEEETTEEEEE-EESSS
T ss_pred ccEEc-Cc-EEEEEecCCcEEEE-EcCCc
Confidence 9999 88 88999999999999 87443
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=1.7e-13 Score=129.83 Aligned_cols=280 Identities=10% Similarity=0.070 Sum_probs=161.8
Q ss_pred cCCCCcEEEEEeCCC--cEEEeecc-----cceeeeE-----ecCCcccceeEEEEecCCCcEEEEEeCC-----CeEEE
Q 016032 29 HPTNNHILLSGDKKG--QVGVWDFY-----KVSEKIV-----YGNIHSCIVNNIRFNPTNDGTVYAASSD-----GTVSC 91 (396)
Q Consensus 29 ~~~~~~~l~s~~~dg--~i~iwd~~-----~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~i 91 (396)
+|+|..++.+....+ .-.+|... .+..... +..+|...+..++|+|+ +++|+.++.+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDD-GRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTT-SSEEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCC-CCEEEEEEcCCCCceEEEEE
Confidence 488865444444333 35556543 3332222 11334457889999999 8887776543 46999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCe--------------EEEEeCCCCCCCcccee-
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF--------------LYLVDARTNSRSGEAIL- 156 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~--------------i~i~d~~~~~~~~~~~~- 156 (396)
||+.+++.+.... . ...+..++|+|+ +.|+.+..++. |++|++.++........
T Consensus 194 ~dl~tg~~~~~~~-~---------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~ 262 (741)
T 1yr2_A 194 VGVADGKPLADEL-K---------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA 262 (741)
T ss_dssp EETTTCCEEEEEE-E---------EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred EECCCCCCCCccC-C---------CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence 9999988754311 0 011357889999 98988876543 89999877653222211
Q ss_pred eecCCccEEEEEeccCCCCEEEEeeCCC-----cEEEEecCCC--CCCCccccCCCCCceeEEEEcCCCCEEEEEeCC--
Q 016032 157 IHRKGSKVVGLHCNPIQPELLLSCGNDH-----FARIWDIRRL--EAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD-- 227 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 227 (396)
...+...+..+.|+| ++++|+..+.++ .|++||+.+. +....+. .+...+... ++|+|..|+..+.+
T Consensus 263 ~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~-~~~dg~~l~~~s~~~~ 338 (741)
T 1yr2_A 263 TPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--PDLKAQWDF-VDGVGDQLWFVSGDGA 338 (741)
T ss_dssp CTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTC
T ss_pred cCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--CCCCceEEE-EeccCCEEEEEECCCC
Confidence 112223588999999 998888776543 8999999764 2012222 233344444 34888888877753
Q ss_pred --CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC-ccchhh
Q 016032 228 --NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT-TGQLVA 304 (396)
Q Consensus 228 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~-~~~~~~ 304 (396)
+.|.+||+.++. .....+.... ... ...+.|+ .+.+++ +...++..+||.+. +++...
T Consensus 339 ~~~~l~~~d~~~~~--~~~~~l~~~~--~~~--l~~~~~~----------~~~lv~---~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 339 PLKKIVRVDLSGST--PRFDTVVPES--KDN--LESVGIA----------GNRLFA---SYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp TTCEEEEEECSSSS--CEEEEEECCC--SSE--EEEEEEE----------BTEEEE---EEEETTEEEEEEEETTSCEEE
T ss_pred CCCEEEEEeCCCCc--cccEEEecCC--CCe--EEEEEEE----------CCEEEE---EEEECCEEEEEEEeCCCCcee
Confidence 459999987642 0011111110 000 0122332 133344 45566665555443 455555
Q ss_pred hhcCCCCCCCcceeeeccCCcEEEe----ec-CCcEEEEcCCCcc
Q 016032 305 EVMDPNITTISPVNKLHPRDDVLAS----GS-SRSIFIWRPKEKS 344 (396)
Q Consensus 305 ~~~~~~~~~i~~~~~~~~~~~~l~s----g~-d~~i~iw~~~~~~ 344 (396)
.+..+....+..+ +++|++..|+. .. .+.|++||+.+++
T Consensus 400 ~l~~~~~~~v~~~-~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 400 AVSLPGIGSASGL-SGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ECBCSSSCEEEEE-ECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eccCCCCeEEEEe-ecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5554433445555 78899875552 22 4899999998876
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=1.4e-11 Score=103.29 Aligned_cols=244 Identities=9% Similarity=-0.003 Sum_probs=160.7
Q ss_pred CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEE
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLY 141 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 141 (396)
.+...+.++++.++ +.++++...++.|.+||.. ++.. .+..... ...+.++++++++..+++...++.|.
T Consensus 12 ~~~~~~~~i~~d~~-g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~-------~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 12 NQDTGPYGITVSDK-GKVWITQHKANMISCINLD-GKIT-EYPLPTP-------DAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp SSSCCEEEEEECTT-SCEEEEETTTTEEEEECTT-CCEE-EEECSST-------TCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcCCCccceEECCC-CCEEEEecCCCcEEEEcCC-CCeE-EecCCcc-------cCceeeEEECCCCCEEEeCCCCCeEE
Confidence 35567999999998 7777776668899999988 5432 2222111 12388999999999888877788999
Q ss_pred EEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEE
Q 016032 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKI 221 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 221 (396)
.||... .. ...........+..+++.+ ++.++++...++.|..||. +.+. ..+........+..++++++|.++
T Consensus 82 ~~~~~g-~~--~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 82 RITKKG-II--KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKI-REYELPNKGSYPSFITLGSDNALW 155 (299)
T ss_dssp EECTTS-CE--EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECTTSCEE
T ss_pred EECCCC-cE--EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCE-EEecCCCCCCCCceEEEcCCCCEE
Confidence 999762 21 1111122344688999999 8888888777889999998 3222 112111234568999999999888
Q ss_pred EEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 222 LTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 222 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
++...++.|..||. +++... ... ......+..+.++++ |++.+ +...++.|.+||. +++
T Consensus 156 v~~~~~~~i~~~~~-~g~~~~----~~~---~~~~~~~~~i~~~~~---------g~l~v---~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 156 FTENQNNAIGRITE-SGDITE----FKI---PTPASGPVGITKGND---------DALWF---VEIIGNKIGRITT-SGE 214 (299)
T ss_dssp EEETTTTEEEEECT-TCCEEE----EEC---SSTTCCEEEEEECTT---------SSEEE---EETTTTEEEEECT-TCC
T ss_pred EEeCCCCEEEEEcC-CCcEEE----eeC---CCCCCcceeEEECCC---------CCEEE---EccCCceEEEECC-CCc
Confidence 77777789999998 555421 000 011223446777776 44443 2344677999998 665
Q ss_pred hhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcc
Q 016032 302 LVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKS 344 (396)
Q Consensus 302 ~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~ 344 (396)
............+..+ +++++|+++++.. ++.|.+|+. +++
T Consensus 215 ~~~~~~~~~~~~~~~i-~~~~~g~l~v~~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 215 ITEFKIPTPNARPHAI-TAGAGIDLWFTEWGANKIGRLTS-NNI 256 (299)
T ss_dssp EEEEECSSTTCCEEEE-EECSTTCEEEEETTTTEEEEEET-TTE
T ss_pred EEEEECCCCCCCceeE-EECCCCCEEEeccCCceEEEECC-CCc
Confidence 4321111122445566 7899999877765 789999998 443
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=2.4e-12 Score=121.50 Aligned_cols=193 Identities=10% Similarity=-0.019 Sum_probs=120.0
Q ss_pred CCCCcEEEEEeCCC----cEEEeecccceeeeEe-----cCCcccceeEEEEecCCCcEEEEEeCCC-----eEEEEECC
Q 016032 30 PTNNHILLSGDKKG----QVGVWDFYKVSEKIVY-----GNIHSCIVNNIRFNPTNDGTVYAASSDG-----TVSCTDLE 95 (396)
Q Consensus 30 ~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~ 95 (396)
|+|.+++.+-...+ .+.+.+...+.....+ ..+|...+..++|+|+ +++|+.++.++ .|++||+.
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD-g~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED-GEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTT-SSEEEEEEEETTCSCEEEEEEETT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCC-CCEEEEEEcCCCCceEEEEEEECC
Confidence 88865554543333 2344444333332221 1235557899999999 88887665433 89999999
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCe----------------EEEEeCCCCCCCccce-eee
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGF----------------LYLVDARTNSRSGEAI-LIH 158 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~----------------i~i~d~~~~~~~~~~~-~~~ 158 (396)
+++........ ..+..++|+||++.|+.+..++. |++|++.++....... ...
T Consensus 160 tg~~~~~~~~~----------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 160 GAKELPDVLER----------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp TTEEEEEEEEE----------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred CCCCCcccccC----------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 98876532111 11567899999999999887765 9999998765322221 112
Q ss_pred cCCccEEEEEeccCCCCEEEEeeC-----CCcEEEEecCC------CC-CCCccccCCCCCceeEEEEcCCCCEEEEEeC
Q 016032 159 RKGSKVVGLHCNPIQPELLLSCGN-----DHFARIWDIRR------LE-AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 159 ~~~~~i~~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~------~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
.+...+..+.|+| ++.+|+..+. +..|++||+.+ +. ....+ ..+...+.. .|+|+|..|+..+.
T Consensus 230 ~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l--~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 230 DEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL--IDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp TCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE--ECSSSSCEE-EEEEETTEEEEEEC
T ss_pred CCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe--eCCCCcEEE-EEeccCCEEEEEEC
Confidence 2334578999999 9998887664 56899999875 22 11222 134444443 47788887766654
Q ss_pred CC----cEEEEEccc
Q 016032 227 DN----RLRIWDSIF 237 (396)
Q Consensus 227 d~----~i~iwd~~~ 237 (396)
.+ .|.+||+.+
T Consensus 306 ~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 306 RHSPNYRLINIDFTD 320 (710)
T ss_dssp TTCTTCEEEEEETTS
T ss_pred CCCCCCEEEEEeCCC
Confidence 32 355666543
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=4e-12 Score=111.24 Aligned_cols=206 Identities=12% Similarity=-0.004 Sum_probs=137.3
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC--eEEEEECCCCc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG--TVSCTDLETGL 98 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~ 98 (396)
.....|+|+|++ +++++...++.|++||..++........ ..... ++|+|+ ++.|+++..++ .|.+++...+.
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~-g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKD-KQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTT-SSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecC-CCcEEEEecCCCceEEEEEcCCCc
Confidence 468899999998 6778877789999999987766555432 22334 999999 88888887765 78888887655
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcccee---eecCCcc--EEEEEeccCC
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAIL---IHRKGSK--VVGLHCNPIQ 173 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~---~~~~~~~--i~~~~~~~~~ 173 (396)
....+..... .....+.+++++|++..|+++..++.|+.||....... ... ....... ...++|+|.+
T Consensus 206 ~~~~~g~~~~-----~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~--~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 206 APTRIGQLGS-----TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT--LIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp CEEEEEECCT-----TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE--EEEECCCCSCCCCSSCCEEEEETTT
T ss_pred eeEEeeeccc-----hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE--EEecccccCCCCCCccccEEEeCCC
Confidence 4333210000 00122678999996666666778889999999865421 110 1111111 1389999944
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccccC-------------CCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccccc
Q 016032 174 PELLLSCGNDHFARIWDIRRLEAGSSLCDL-------------PHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGN 239 (396)
Q Consensus 174 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~ 239 (396)
+.++++-...+.|+.|+.... ...+... ..-.....++++|+|.++++-. .++.|+.|++.++.
T Consensus 279 g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp TEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred CEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 667777777889999987531 1111000 0123478999999999777777 78999999987765
Q ss_pred c
Q 016032 240 L 240 (396)
Q Consensus 240 ~ 240 (396)
.
T Consensus 357 v 357 (409)
T 3hrp_A 357 V 357 (409)
T ss_dssp E
T ss_pred E
Confidence 4
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=7.4e-12 Score=105.91 Aligned_cols=211 Identities=10% Similarity=0.094 Sum_probs=135.0
Q ss_pred eeccccCCeEEEEecCCCCcEEEE-------EeCCCcEEEeecccceeeeEec---CCcccceeEEEEecCCCcEEEEEe
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLS-------GDKKGQVGVWDFYKVSEKIVYG---NIHSCIVNNIRFNPTNDGTVYAAS 84 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~ 84 (396)
.+...-....+++|++++ +++++ +..++.|.+||..+++...... .++...+..++++++ +..|+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~-~g~l~v~~ 89 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD-ANQLFVAD 89 (314)
T ss_dssp EEECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS-SSEEEEEE
T ss_pred hhhccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC-CCcEEEEE
Confidence 344455577899999988 67777 5678899999987765443321 124567899999987 34555555
Q ss_pred CCCeEEEEECCCCcccce-eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC---------------CeEEEEeCCCC
Q 016032 85 SDGTVSCTDLETGLALSL-MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF---------------GFLYLVDARTN 148 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------g~i~i~d~~~~ 148 (396)
..+.|.+||.. ++.... .... .. .....+.+++++++++++++...+ +.|..++.. +
T Consensus 90 ~~~~l~~~d~~-g~~~~~~~~~~-~~----~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (314)
T 1pjx_A 90 MRLGLLVVQTD-GTFEEIAKKDS-EG----RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G 162 (314)
T ss_dssp TTTEEEEEETT-SCEEECCSBCT-TS----CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred CCCCEEEEeCC-CCEEEEEeccC-CC----ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence 55579999988 654332 2111 00 111237889999999888777655 577778765 3
Q ss_pred CCCccceeeecCCccEEEEEec----cCCCCEE-EEeeCCCcEEEEecC-CCCC--CCccccC-CCC-CceeEEEEcCCC
Q 016032 149 SRSGEAILIHRKGSKVVGLHCN----PIQPELL-LSCGNDHFARIWDIR-RLEA--GSSLCDL-PHK-RVVNSAYFSPSG 218 (396)
Q Consensus 149 ~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l-~~~~~d~~i~~wd~~-~~~~--~~~~~~~-~~~-~~i~~~~~~~~~ 218 (396)
.. .. ..........++++ | +++.+ ++...++.|.+||+. .... ...+..+ .+. ..+..++++++|
T Consensus 163 ~~-~~---~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 163 QM-IQ---VDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp CE-EE---EEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CE-EE---eccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence 22 11 11112246788999 8 77554 455567899999975 2211 0111112 222 567889999999
Q ss_pred CEEEEEeCCCcEEEEEccccc
Q 016032 219 SKILTTSQDNRLRIWDSIFGN 239 (396)
Q Consensus 219 ~~l~~~~~d~~i~iwd~~~~~ 239 (396)
.++++...++.|.+||..+++
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBS
T ss_pred CEEEEEcCCCEEEEEcCCCCc
Confidence 888777777888888875443
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=3e-12 Score=121.28 Aligned_cols=252 Identities=10% Similarity=-0.029 Sum_probs=148.5
Q ss_pred ccCCeEEEEecCCCCcEEEEEe-CCC----cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC------
Q 016032 19 HSRRVTCLEFHPTNNHILLSGD-KKG----QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG------ 87 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~-~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg------ 87 (396)
|...+..++|||||. +||.++ .+| .|++||+.+++...... +...+..++|+|+ . .|+.++.++
T Consensus 161 ~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-D-ALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-S-EEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-C-EEEEEEecCcccccc
Confidence 445788999999995 555444 334 59999999887654322 3333468999998 4 455544443
Q ss_pred --------eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC-----eEEEEeCCCCCCC-cc
Q 016032 88 --------TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-----FLYLVDARTNSRS-GE 153 (396)
Q Consensus 88 --------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g-----~i~i~d~~~~~~~-~~ 153 (396)
.|++|++.++.....+..... .....+..+.|+|+|++|+..+.++ .|++||+.++... ..
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~-----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATP-----ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCT-----TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccC-----CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 389999987764322221111 0101267889999999998877544 8999999875211 11
Q ss_pred ceeeecCCccEEEEEeccCCCCEEEEeeCC----CcEEEEecCCCC-CCCccccCCCCCceeEEEEcCCCCEEEEEeCCC
Q 016032 154 AILIHRKGSKVVGLHCNPIQPELLLSCGND----HFARIWDIRRLE-AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN 228 (396)
Q Consensus 154 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 228 (396)
. ............ .| ++..|+..+.+ +.|.+||+.+.. ....+. ..+...+..++|+ ++.++++...|+
T Consensus 311 ~--l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg 384 (741)
T 1yr2_A 311 A--LIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA-GNRLFASYIHDA 384 (741)
T ss_dssp E--EECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETT
T ss_pred E--ecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECC
Confidence 1 112222233333 36 77777776653 459999987642 111121 2344557778887 666788888899
Q ss_pred cEEEEEcc-cccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccc
Q 016032 229 RLRIWDSI-FGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQ 301 (396)
Q Consensus 229 ~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~ 301 (396)
..+||.+. ++.... ...+........+.++|+.....+.. .+....++|++||+.+++
T Consensus 385 ~~~l~~~~~~g~~~~-------~l~~~~~~~v~~~~~s~d~~~l~~~~--------ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 385 KSQVLAFDLDGKPAG-------AVSLPGIGSASGLSGRPGDRHAYLSF--------SSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEEETTSCEEE-------ECBCSSSCEEEEEECCBTCSCEEEEE--------EETTEEEEEEEEETTTTE
T ss_pred EEEEEEEeCCCCcee-------eccCCCCeEEEEeecCCCCCEEEEEE--------cCCCCCCEEEEEECCCCc
Confidence 88877664 232211 11111112223566777632222111 145667889999998876
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=2.2e-13 Score=116.46 Aligned_cols=176 Identities=11% Similarity=0.065 Sum_probs=126.2
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccce---------eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEE
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---------EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
.++.+++++.. .++++|+.+ .+++|++.... ........+.. |+.++| + +.+|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d-~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--H-GDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--E-TTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--C-CCEEEEE-cCCcEEEE
Confidence 68999999998 588888887 46679976543 11111123566 999999 6 8899888 78999999
Q ss_pred ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccC
Q 016032 93 DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
|+.+............ .+.++.+.+. .+++++.+|.|.+||+..+... . ....|++++|+|
T Consensus 112 dv~sl~~~~~~~~~~~---------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~----~---~~~~Vs~v~WSp- 172 (388)
T 1xip_A 112 DLEELSEFRTVTSFEK---------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK----Q---LAQNVTSFDVTN- 172 (388)
T ss_dssp ESSSTTCEEEEEECSS---------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEE----E---EEESEEEEEECS-
T ss_pred EchhhhccCccceeec---------ceeeEEecCC--CEEEEECCCCEEEEEccCCccc----c---ccCCceEEEEcC-
Confidence 9987664433322221 1566666544 3888999999999999976532 1 123699999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCC--CCccc-------cCCCCCceeEEEEcCCCCEEEEEe
Q 016032 173 QPELLLSCGNDHFARIWDIRRLEA--GSSLC-------DLPHKRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 173 ~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~-------~~~~~~~i~~~~~~~~~~~l~~~~ 225 (396)
++ ++.|..||.+++|+....+. ...+. ..+|...|.++.|.+++.++++-.
T Consensus 173 kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 173 SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 77 77888999999998865442 22221 123678899999999998887643
No 204
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=2.5e-12 Score=107.86 Aligned_cols=206 Identities=9% Similarity=0.024 Sum_probs=135.4
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC---CcccceeEEEEecCCCcEEEEEeC----
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN---IHSCIVNNIRFNPTNDGTVYAASS---- 85 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~---- 85 (396)
...+..+...+.+++++|+| +++++...++.|.+||..++........ .....+..++++|+ +.++++.+.
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGID 138 (296)
T ss_dssp EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHH
T ss_pred eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccc
Confidence 45666778889999999999 5777776678999999977654433211 11235678999998 887777321
Q ss_pred -------------CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC-CCCCC
Q 016032 86 -------------DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR-TNSRS 151 (396)
Q Consensus 86 -------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~-~~~~~ 151 (396)
.+.|..++.. ++. ..+.... .....++|+|+++.+++.+.++.|++|++. .+...
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~---------~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~ 207 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDR---------VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE 207 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCC---------SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE
T ss_pred cccccccccccCCCcEEEEECCC-CCE-EEeecCC---------CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc
Confidence 2355555544 332 2221111 126889999999998777778999999987 33220
Q ss_pred ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEE-cCCCCEEEEEeCCCc
Q 016032 152 GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYF-SPSGSKILTTSQDNR 229 (396)
Q Consensus 152 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~-~~~~~~l~~~~~d~~ 229 (396)
............+.++++.+ +++++++. ++.|.+||.. ++ .+..+ .+.. +.+++| +|+++.|++++.+ .
T Consensus 208 ~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~---~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~ 278 (296)
T 3e5z_A 208 YQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GD---ELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-E 278 (296)
T ss_dssp EEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SC---EEEEEECSSC-CCEEEEESTTSCEEEEEETT-E
T ss_pred CCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CC---EEEEEECCCC-ceeEEEECCCCCEEEEEcCC-e
Confidence 11111122333567899999 88876666 7899999975 22 22222 2344 899999 5899989888865 4
Q ss_pred EEEEEcccccc
Q 016032 230 LRIWDSIFGNL 240 (396)
Q Consensus 230 i~iwd~~~~~~ 240 (396)
+..++..+.++
T Consensus 279 l~~~~~~~~~~ 289 (296)
T 3e5z_A 279 FWSIETNVRGL 289 (296)
T ss_dssp EEEEECSCCBC
T ss_pred EEEEEcccccc
Confidence 55666666554
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=2e-11 Score=100.77 Aligned_cols=206 Identities=10% Similarity=0.038 Sum_probs=148.0
Q ss_pred CCCCCccceeeecccc-CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 5 HVIPDQVNCAVIRYHS-RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 5 ~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
|+..+++.+..+..|. ..+.++.++|+| ++|++ .++.|..||. +++.+..+..+....+.++.+.|+ ++.+++.
T Consensus 20 ~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~d-G~~lv~~ 94 (276)
T 3no2_A 20 INKDTKEIVWEYPLEKGWECNSVAATKAG-EILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPD-GNALVAW 94 (276)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEEECTTS-CEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTT-SCEEEEE
T ss_pred EECCCCeEEEEeCCCccCCCcCeEECCCC-CEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCC-CCEEEEe
Confidence 4555677777777776 578999999999 67773 4678999999 777777775433457889999999 8888888
Q ss_pred eC-CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCc
Q 016032 84 SS-DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGS 162 (396)
Q Consensus 84 ~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~ 162 (396)
+. ++.|..++. +++.+..+...... ..+ ......+++.++++++++...++.|..||.. ++...+... ..
T Consensus 95 ~~~~~~v~~vd~-~Gk~l~~~~~~~~~-~~~--~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~----~~ 165 (276)
T 3no2_A 95 CGHPSTILEVNM-KGEVLSKTEFETGI-ERP--HAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL----SG 165 (276)
T ss_dssp ESTTEEEEEECT-TSCEEEEEEECCSC-SSG--GGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC----SS
T ss_pred cCCCCEEEEEeC-CCCEEEEEeccCCC-Ccc--cccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC----CC
Confidence 77 788888885 67777776654321 111 1124556789999999999999999999988 665543211 12
Q ss_pred cEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCC----CCCceeEEEEcCCCCEEEEEe
Q 016032 163 KVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP----HKRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~ 225 (396)
.+.++...+ +++++++++.++.|..+|..+++....+.... ....+..++..++|.++++..
T Consensus 166 ~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 166 TPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 455677788 89999999888899999987655433332111 123478888999999888774
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.48 E-value=7.6e-11 Score=101.66 Aligned_cols=258 Identities=9% Similarity=-0.047 Sum_probs=158.0
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEe----------CCCcEEEeecccceeeeEecCC------cccceeEEE
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGD----------KKGQVGVWDFYKVSEKIVYGNI------HSCIVNNIR 71 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~ 71 (396)
.+.+.+..+..-..+ .++++|||. .|+.+. .++.|.+||..+.+....+..+ +......+.
T Consensus 55 ~t~~~~~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~ 131 (373)
T 2mad_H 55 GSGSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNA 131 (373)
T ss_pred CCCeEEEEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceE
Confidence 344444455443333 899999995 555553 3678999999887666554321 113356899
Q ss_pred EecCCCcEEEEEeC--CCeEEEEECCCCcccce-eecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeCCC
Q 016032 72 FNPTNDGTVYAASS--DGTVSCTDLETGLALSL-MNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDART 147 (396)
Q Consensus 72 ~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~~~ 147 (396)
|+|+ +++|++++. ++.|.++| .+++.+.. +... .++.+.|.+ ..+++.+.+|.+.++|. +
T Consensus 132 ~spD-G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-------------~~~~~~~~~~~~~~~~~~dg~~~~vd~-~ 195 (373)
T 2mad_H 132 NTPN-NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-------------TCYHIHPGAPSTFYLLCAQGGLAKTDH-A 195 (373)
T ss_pred ECCC-CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-------------ceEEEEeCCCceEEEEcCCCCEEEEEC-C
Confidence 9999 888888764 57899999 99887766 5332 123344544 45566778899999998 6
Q ss_pred CCCCccce--eeecCCcc-EEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC--CccccC--------CCCCceeEEEE
Q 016032 148 NSRSGEAI--LIHRKGSK-VVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG--SSLCDL--------PHKRVVNSAYF 214 (396)
Q Consensus 148 ~~~~~~~~--~~~~~~~~-i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~--------~~~~~i~~~~~ 214 (396)
++...... .......+ .....+.+ ++..++..+..+.+.+.|+...... ..+... -.......+.+
T Consensus 196 g~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 196 GGAAGAGLVGAMLTAAQNLLTQPAQAN-KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred CcEEEEEeccccccCCcceeecceeEe-cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 54432110 00011111 12345556 4444443346789999998643211 111000 01223445789
Q ss_pred cCCCCEEEEEeC----------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee-eeeee
Q 016032 215 SPSGSKILTTSQ----------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR-YISEN 283 (396)
Q Consensus 215 ~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~ 283 (396)
+|+++.|+++.. .+.|.++|+.+++.+... .. ...+..+.|+|+ |+ ++.
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-------~~--g~~p~~i~~s~D---------g~~~l~-- 334 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-------SL--GHDVDAISVAQD---------GGPDLY-- 334 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-------EC--CCCcCeEEECCC---------CCeEEE--
Confidence 999998887653 357999999988764321 11 113458899998 65 343
Q ss_pred cccc-cccceEEEEcCccchhhhh
Q 016032 284 YNGA-ALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 284 ~~g~-~d~~i~vwd~~~~~~~~~~ 306 (396)
++. .++.|.++|+.+++.+.++
T Consensus 335 -v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 335 -ALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred -EEcCCCCeEEEEECCCCCEEeee
Confidence 333 5789999999999988773
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=2.7e-11 Score=103.10 Aligned_cols=266 Identities=10% Similarity=-0.038 Sum_probs=162.3
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEe---------CCCcEEEeecccceeeeEecCCc------ccceeEEEE
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGD---------KKGQVGVWDFYKVSEKIVYGNIH------SCIVNNIRF 72 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~ 72 (396)
.+.+.+..+..-..+ .++++|+|..++++.. .++.|.+||..+.+....+..+. ......+.|
T Consensus 67 ~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 67 EAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 144 (386)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE
T ss_pred CCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE
Confidence 344445555544444 4999999954444432 36789999999988776653221 235677999
Q ss_pred ecCCCcEEEEEeC--CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCC-CC
Q 016032 73 NPTNDGTVYAASS--DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDART-NS 149 (396)
Q Consensus 73 ~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~-~~ 149 (396)
+|+ +++++++.. ++.|.++|+.+++.+..+..+.. ...+....+.+++.+.||.+.+.++.. ++
T Consensus 145 spD-Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~------------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~ 211 (386)
T 3sjl_D 145 TPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC------------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGT 211 (386)
T ss_dssp CTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE------------EEEEEEETTEEEEEETTSCEEEEECCSSSC
T ss_pred cCC-CCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc------------ceeecCCCceeEEECCCCCEEEEECCCCCe
Confidence 999 888887764 68999999999999888754321 112222345666777778777777765 33
Q ss_pred CCcccee-eecCCccE-EEEEeccCCCCEEEEeeCCCcEEEEecCCCCC--CCccccCC--------CCCceeEEEEcCC
Q 016032 150 RSGEAIL-IHRKGSKV-VGLHCNPIQPELLLSCGNDHFARIWDIRRLEA--GSSLCDLP--------HKRVVNSAYFSPS 217 (396)
Q Consensus 150 ~~~~~~~-~~~~~~~i-~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~--------~~~~i~~~~~~~~ 217 (396)
....... ......++ ....|.+.++.+++ .+.+|.|++.|+..... ...+..+. .......++++++
T Consensus 212 v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 212 PEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp CEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred EEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 2110000 00011112 12355432665555 45579999999865431 11121010 1223445788999
Q ss_pred CCEEEEEeC----------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee-eeeeeccc
Q 016032 218 GSKILTTSQ----------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR-YISENYNG 286 (396)
Q Consensus 218 ~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g 286 (396)
++.|++... .+.|.++|+.+++.+..... . ..+..+.++++ |+ ++.. +.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-------g--~~~~~lavs~D---------~~~~ly~--tn 350 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-------G--HEIDSINVSQD---------EKPLLYA--LS 350 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-------E--EEECEEEECSS---------SSCEEEE--EE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-------C--CCcceEEECCC---------CCeEEEE--Ec
Confidence 998887643 25799999999887542211 1 12346888888 43 2221 23
Q ss_pred ccccceEEEEcCccchhhhhcCC
Q 016032 287 AALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
..++.|.++|..+++.+.++...
T Consensus 351 ~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 351 TGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp TTTTEEEEEETTTCCEEEEECCC
T ss_pred CCCCeEEEEECCCCcEEEEecCC
Confidence 45788999999999999888654
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=3.8e-11 Score=105.03 Aligned_cols=247 Identities=8% Similarity=-0.044 Sum_probs=152.9
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC--eEEE
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG--FLYL 142 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g--~i~i 142 (396)
.....|+|+++ +.++++...++.|++||..++......... . ... ++|+++++.|+++..++ .|.+
T Consensus 131 ~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~---------~~~-ia~~~~g~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 131 KYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVHPGF-K---------GGK-PAVTKDKQRVYSIGWEGTHTVYV 198 (409)
T ss_dssp CCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEEETC-C---------BCB-CEECTTSSEEEEEBSSTTCEEEE
T ss_pred CCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEeeccC-C---------CCc-eeEecCCCcEEEEecCCCceEEE
Confidence 35789999998 777777777899999999887665444321 1 134 88999999999888766 7999
Q ss_pred EeCCCCCCCccceeeec-CCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccc---cCCCCCce--eEEEEcC
Q 016032 143 VDARTNSRSGEAILIHR-KGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLC---DLPHKRVV--NSAYFSP 216 (396)
Q Consensus 143 ~d~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~i--~~~~~~~ 216 (396)
++..........-.... ....+.+++++| +...|+.+..++.|+.||..+... ..+. ..+....- ..++|+|
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEET
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeC
Confidence 98876443211101111 334578899999 555555577788999999875432 1110 11122222 3999999
Q ss_pred C-CCEEEEEeCCCcEEEEEcccccccCCCcce---ee---cccccccCCceeEEeCCCCCCCceeeEeeeeeeecccc-c
Q 016032 217 S-GSKILTTSQDNRLRIWDSIFGNLDSPSREI---VH---SHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGA-A 288 (396)
Q Consensus 217 ~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~ 288 (396)
+ +.++++-..++.|+.|+.... ........ .. .........+..++++|+ |++.. +.. .
T Consensus 277 ~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d---------G~lyv---ad~~~ 343 (409)
T 3hrp_A 277 VDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED---------GNFYI---VDGFK 343 (409)
T ss_dssp TTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT---------CCEEE---EETTT
T ss_pred CCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC---------CCEEE---EeCCC
Confidence 5 555566667789999987642 11000000 00 000011223567888887 55444 345 6
Q ss_pred ccceEEEEcCccchhhhhcCC--------------CCCCCcceeeeccCCcEEEeec-CCcEEEEcC
Q 016032 289 LHPIDFIDITTGQLVAEVMDP--------------NITTISPVNKLHPRDDVLASGS-SRSIFIWRP 340 (396)
Q Consensus 289 d~~i~vwd~~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~ 340 (396)
++.|+.|++.+++.. ++.++ .......+ +++++|.++++-. ++.|+.+.+
T Consensus 344 ~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~gi-avd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 344 GYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDI-CYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEE-EECSSSEEEEEESTTCEEEEEEE
T ss_pred CCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEE-EEcCCCCEEEEECCCCeEEEEEe
Confidence 788999997777643 22222 01234455 7889988888766 788887765
No 209
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.44 E-value=2.6e-11 Score=113.12 Aligned_cols=302 Identities=15% Similarity=0.108 Sum_probs=178.6
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCcccc---------e-eEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCI---------V-NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN 104 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------v-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 104 (396)
.|+.++.++.|.-+|..+++.+..+....... + ..+... +..++.++.|+.|..+|..+|+.+..+.
T Consensus 72 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp EEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE---CCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 46677778999999999998887764211110 0 112332 5688889999999999999999988776
Q ss_pred cC-CCCCCCCCcceeeeEEEeCC--CCCEEEEEe------cCCeEEEEeCCCCCCCccceeee-----------------
Q 016032 105 VN-PNGWHGPRTWRMLYGMDINP--EKGVVLVAD------NFGFLYLVDARTNSRSGEAILIH----------------- 158 (396)
Q Consensus 105 ~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~------~~g~i~i~d~~~~~~~~~~~~~~----------------- 158 (396)
.. .... ...+..+| .+..++++. .+|.|+.||..+++.........
T Consensus 149 ~~~~~~~--------~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 149 TRADHKR--------SYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp CCSCTTS--------CCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred CcCCCCC--------CccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 53 1110 00011111 133455543 36899999999987654432110
Q ss_pred -----------cCCccEEEEEeccCCCCEEEEeeCCCc-------------------EEEEecCCCCCCCccccCCCC--
Q 016032 159 -----------RKGSKVVGLHCNPIQPELLLSCGNDHF-------------------ARIWDIRRLEAGSSLCDLPHK-- 206 (396)
Q Consensus 159 -----------~~~~~i~~~~~~~~~~~~l~~~~~d~~-------------------i~~wd~~~~~~~~~~~~~~~~-- 206 (396)
........+++.| +..+++.++.++. |..+|..+++..-..+...|.
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~w 299 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAW 299 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCS
T ss_pred ccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccc
Confidence 0001112567888 7788888887763 999999887654333322221
Q ss_pred -----CceeEEEEcCCCC---EEEEEeCCCcEEEEEcccccccCCCcce----eec------------------------
Q 016032 207 -----RVVNSAYFSPSGS---KILTTSQDNRLRIWDSIFGNLDSPSREI----VHS------------------------ 250 (396)
Q Consensus 207 -----~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~~~------------------------ 250 (396)
.++.......+|+ .++.++.+|.++++|..+|+++...... ...
T Consensus 300 d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~ 379 (689)
T 1yiq_A 300 DYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRN 379 (689)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCE
T ss_pred cccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCee
Confidence 2222222223565 7889999999999999999975211100 000
Q ss_pred ---ccccccCCceeEEeCCCCCCCceeeEeee--eee--------------eccc------------------ccccceE
Q 016032 251 ---HDFNRHLTPFRAEWDPKDPSESLAVIGRY--ISE--------------NYNG------------------AALHPID 293 (396)
Q Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~--------------~~~g------------------~~d~~i~ 293 (396)
....+...--.++++|+.....+.. ... ... ...| ..++.|.
T Consensus 380 ~~~p~~~Gg~~w~~~a~dp~~~~~yv~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~ 458 (689)
T 1yiq_A 380 LVTPAFWGAHDWQPMSYNPDTGLVYIPA-HIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI 458 (689)
T ss_dssp EESSCTTCSSCSSCCEEETTTTEEEEEE-EECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred EeCCCcccccCCCcceECCCCCEEEEec-cccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence 0000000001245565532111111 000 000 0011 1258899
Q ss_pred EEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeecccc
Q 016032 294 FIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 294 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
.||+.+|+.+.++..+. ....- .+...+.+|+.|+ |+.|+.||..+|+++.+++.+
T Consensus 459 A~D~~tG~~~W~~~~~~--~~~~g-~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 459 AWDPVKQQAAWEVPYVT--IFNGG-TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEETTTTEEEEEEEESS--SCCCC-EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EEECCCCCeEeEccCCC--CccCc-cceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 99999999888776543 22222 4677788888888 999999999999999887655
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=7.3e-10 Score=92.82 Aligned_cols=199 Identities=8% Similarity=-0.031 Sum_probs=137.6
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
+...+.++++.+++ +++++...++.|..||.. +.............+..+++.++ +.++++...++.|..++.. ++
T Consensus 60 ~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 60 PDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-CC
Confidence 44678999999998 566666667889999988 44332222334467899999988 7777777768899999987 55
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
.. .+..... ...+..+++.++++.+++...++.|..+|. .+.... .........+..+++.+ ++++++
T Consensus 136 ~~-~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~d~-~g~l~v 203 (300)
T 2qc5_A 136 IY-EYDLPNK-------GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE--YPLPTNAAAPVGITSGN-DGALWF 203 (300)
T ss_dssp EE-EEECSST-------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECT-TSSEEE
T ss_pred EE-EccCCCC-------CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE--eeCCCCCCCcceEEECC-CCCEEE
Confidence 43 2222111 123789999999997776666789999998 433221 12222334688999999 888777
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
+....+.|.+||. +... ...........+.+++++++|.+.++...++.|..||.
T Consensus 204 ~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 204 VEIMGNKIGRITT-TGEI-SEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred EccCCCEEEEEcC-CCcE-EEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 7777788999997 2221 11111124456889999999987776666789999998
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=2.5e-11 Score=103.87 Aligned_cols=279 Identities=9% Similarity=-0.015 Sum_probs=161.6
Q ss_pred CCeEEEEecCCCCcEEEEEe--CCCcEEEeecccceeeeEe------cCCcccceeEEEEecCCCcEEEEEeC-----CC
Q 016032 21 RRVTCLEFHPTNNHILLSGD--KKGQVGVWDFYKVSEKIVY------GNIHSCIVNNIRFNPTNDGTVYAASS-----DG 87 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~s~~~-----dg 87 (396)
..+..++++|+| +++++.. .++.++||.+.++... .+ ...|-..+..+++.++ +.++++-.. ++
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCC
Confidence 789999999999 6777753 2343566666543322 11 1235568999999998 666555433 57
Q ss_pred eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-e---cCCeEEEEeCCCCCCCccceeeecCCcc
Q 016032 88 TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-D---NFGFLYLVDARTNSRSGEAILIHRKGSK 163 (396)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 163 (396)
.|.+||+.+++.+..+..+.... . ....+..+++++++..++.+ . .++.|.+||+.+++.... ...+...
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~-~--~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~---~~~~~~~ 167 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPIT-L--SNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV---LQGYPGI 167 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTS-C--TTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE---CTTCTTT
T ss_pred eEEEEECCCCeEEEEEECChhhc-c--cccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE---ecCCCcc
Confidence 89999999998777766542211 1 11236889999865555444 4 578999999987643211 1111000
Q ss_pred -EEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccC
Q 016032 164 -VVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 164 -i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 242 (396)
.....+.+ ++..+.+.+.++.++.|. ..+..++|+|+++.|+++...+. ++|.+.......
T Consensus 168 ~~~~~~~~~-~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~ 229 (343)
T 2qe8_A 168 APEDIDLVI-DGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSN 229 (343)
T ss_dssp SCCSCCCEE-TTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTC
T ss_pred cccccceeE-CCEEEEeccCCCceecee----------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcC
Confidence 00023334 555566666677665542 13678999999999988877663 445443221110
Q ss_pred -CC--cceeeccc-ccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCccee
Q 016032 243 -PS--REIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVN 318 (396)
Q Consensus 243 -~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~ 318 (396)
.. ........ ......+-.++++++ |++.+ +...++.|.+||..+|+.......+.......+
T Consensus 230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~---------G~l~v---a~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~v- 296 (343)
T 2qe8_A 230 LQLTDAELGSKIERYSEKPICDGISIDKD---------HNIYV---GDLAHSAIGVITSADRAYKLLVTDEKLSWTDSF- 296 (343)
T ss_dssp TTCCHHHHHTTCEEEEECCSCSCEEECTT---------CCEEE---EEGGGTEEEEEETTTTEEEEEEECGGGSCEEEE-
T ss_pred CCCChhhhhcceEecccCCCCceEEECCC---------CCEEE---EccCCCeEEEEECCCCCEEEEEECCceecCCee-
Confidence 00 00000000 000112335677776 65555 456678899999856654332222223445566
Q ss_pred eeccCCcEEEeec-CCcEEEEc
Q 016032 319 KLHPRDDVLASGS-SRSIFIWR 339 (396)
Q Consensus 319 ~~~~~~~~l~sg~-d~~i~iw~ 339 (396)
+|.+++.++++.+ .+.+.+|.
T Consensus 297 a~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 297 NFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EECTTSCEEEEECCGGGSGGGB
T ss_pred EECCCCcEEEEeCccccccccc
Confidence 8999998888876 44554444
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.42 E-value=4.6e-11 Score=112.19 Aligned_cols=209 Identities=12% Similarity=0.040 Sum_probs=125.9
Q ss_pred cccCCeEEEEecCCCCcEEEEEeC----CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC------
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDK----KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG------ 87 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg------ 87 (396)
+|...+..++|||||..++++.+. ...|++||+.+++...... +......++|+ + ++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~k~~~~~Ws-D-g~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KDVKFSGISWL-G-NEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EEEESCCCEEE-T-TTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CCceeccEEEe-C-CCEEEEEEecCcccccc
Confidence 466678899999999544444333 3469999999987554322 22224678999 8 78787777664
Q ss_pred -------eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec----CCeEEEEeCCCCCCCcccee
Q 016032 88 -------TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN----FGFLYLVDARTNSRSGEAIL 156 (396)
Q Consensus 88 -------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~g~i~i~d~~~~~~~~~~~~ 156 (396)
.|++|++.++............ .+......+.|+|++++|+.... ...|+++|+..+......+.
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~----~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIP----AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSG----GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCC----CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 3999999876543222111110 00112567889999998876543 24899999987642222222
Q ss_pred eecCCccEEEEEeccCCCCEEEEeeCC---CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC---cE
Q 016032 157 IHRKGSKVVGLHCNPIQPELLLSCGND---HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN---RL 230 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~~~~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i 230 (396)
......... +++..+.+++....+ +.|..+|+.+...........+...+. .|+++++.|+....++ .|
T Consensus 278 --~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 278 --GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp --CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred --CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 222233333 455134444454443 579999987644311111123444444 8899888887766544 68
Q ss_pred EEEEccccc
Q 016032 231 RIWDSIFGN 239 (396)
Q Consensus 231 ~iwd~~~~~ 239 (396)
++|++..+.
T Consensus 353 ~~~d~~g~~ 361 (693)
T 3iuj_A 353 EQFDYEGKR 361 (693)
T ss_dssp EEECTTSCE
T ss_pred EEEECCCCe
Confidence 899887543
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.42 E-value=9.8e-11 Score=98.50 Aligned_cols=235 Identities=12% Similarity=0.042 Sum_probs=145.2
Q ss_pred cccceeEEEEecCCCc-EEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEE
Q 016032 63 HSCIVNNIRFNPTNDG-TVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLY 141 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 141 (396)
.........|+|+ ++ ++++...++.|..|+. +++. ..+..... .+..++++++|+++++...++.|.
T Consensus 43 ~~~~~egp~~~~~-g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~---------~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 43 QATWSEGPAWWEA-QRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATA---------FTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CCSSEEEEEEEGG-GTEEEEEETTTTEEEEEET-TSCE-EEEEESCS---------CEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCcCccCCeEeCC-CCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCC---------ccceeeECCCCCEEEEECCCCEEE
Confidence 4456778999999 65 6777778899999997 4442 33332221 278999999999777666678999
Q ss_pred EEeCCCCCCCccceeeec--CCccEEEEEeccCCCCEEEE----eeC-------------CCcEEEEecCCCCCCCcccc
Q 016032 142 LVDARTNSRSGEAILIHR--KGSKVVGLHCNPIQPELLLS----CGN-------------DHFARIWDIRRLEAGSSLCD 202 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~----~~~-------------d~~i~~wd~~~~~~~~~~~~ 202 (396)
+|+.. +.. ........ ....+..+++.| +++++++ |.. .+.|+.||..+++.....
T Consensus 111 ~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-- 185 (305)
T 3dr2_A 111 RSDAD-GQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-- 185 (305)
T ss_dssp EECTT-SCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred EECCC-CCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence 99975 332 11111111 112366799999 8988886 432 256777776544332211
Q ss_pred CCCCCceeEEEEcCCCCEEEEEeCC------CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeE
Q 016032 203 LPHKRVVNSAYFSPSGSKILTTSQD------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVI 276 (396)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (396)
.....+.++|+|+++.|+++... +.|.+|++..+. +..... .... ....+-.+.++++
T Consensus 186 --~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~-~~~~---~~~~pdgi~~d~~--------- 249 (305)
T 3dr2_A 186 --DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRH-FASV---PDGLPDGFCVDRG--------- 249 (305)
T ss_dssp --EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEE-EECC---SSSCCCSEEECTT---------
T ss_pred --cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeE-EEEC---CCCCCCeEEECCC---------
Confidence 23456789999999988777665 689999987543 111010 0000 0111224555655
Q ss_pred eeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEc
Q 016032 277 GRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWR 339 (396)
Q Consensus 277 g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~ 339 (396)
|++.+ +..++ |.+|+. +++.+..+..+. .+..+ +|+|+++.|..++.+.|+.++
T Consensus 250 G~lwv----~~~~g-v~~~~~-~g~~~~~~~~~~--~~~~~-~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 250 GWLWS----SSGTG-VCVFDS-DGQLLGHIPTPG--TASNC-TFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp SCEEE----CCSSE-EEEECT-TSCEEEEEECSS--CCCEE-EECTTSCEEEEEETTEEEEEE
T ss_pred CCEEE----ecCCc-EEEECC-CCCEEEEEECCC--ceeEE-EEeCCCCEEEEEcCCeEEEEE
Confidence 66444 23334 999998 576666665543 35556 799999888777644444433
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=8.9e-11 Score=109.34 Aligned_cols=304 Identities=13% Similarity=0.089 Sum_probs=180.0
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCccc----------ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC----------IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN 104 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 104 (396)
.|+.++.++.|.-+|..+++.+..+...... ....+++. +..++.++.|+.|..+|..+|+.+..+.
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE---CCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 4666777889999999999888776422110 01223332 5688888999999999999999988876
Q ss_pred cCCCCCCCCCcceeee-EEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeecC-----------------
Q 016032 105 VNPNGWHGPRTWRMLY-GMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHRK----------------- 160 (396)
Q Consensus 105 ~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~~----------------- 160 (396)
.......... +. .... .+..+++++. +|.|+.+|..+++...........
T Consensus 156 ~~~~~~~~~~----~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 156 TFEGQKGSLT----ITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp TTTTCCSSCB----CCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred CCcCcCcCcc----cccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 5411000000 11 0011 2445555553 689999999998765433211100
Q ss_pred ------------CccEEEEEeccCCCCEEEEeeCCC-------------------cEEEEecCCCCCCCccccCCCC---
Q 016032 161 ------------GSKVVGLHCNPIQPELLLSCGNDH-------------------FARIWDIRRLEAGSSLCDLPHK--- 206 (396)
Q Consensus 161 ------------~~~i~~~~~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~~~~~~--- 206 (396)
......++++| +..+++.++.++ .|..+|.++++..-.++...|.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD 308 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred cccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc
Confidence 01113567788 777888777654 4899999876654333322221
Q ss_pred ----CceeEEEEcCCC---CEEEEEeCCCcEEEEEcccccccCCCcceeec---------------------------cc
Q 016032 207 ----RVVNSAYFSPSG---SKILTTSQDNRLRIWDSIFGNLDSPSREIVHS---------------------------HD 252 (396)
Q Consensus 207 ----~~i~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------------------~~ 252 (396)
....-+....+| ..|+.++.+|.+.++|..+|+++......... ..
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 222233334477 68899999999999999999875322110000 00
Q ss_pred ccccCCceeEEeCCCCCCCceeeEeeeeee-----------------------eccc----------ccccceEEEEcCc
Q 016032 253 FNRHLTPFRAEWDPKDPSESLAVIGRYISE-----------------------NYNG----------AALHPIDFIDITT 299 (396)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----------------------~~~g----------~~d~~i~vwd~~~ 299 (396)
..+...--.++++|+.....+.. .. +.. .+.| ...+.|..||+.+
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t 466 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPA-QN-VPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA 466 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEE-EE-CCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT
T ss_pred cccccCCCCceEcCCCCEEEEeC-hh-cceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC
Confidence 00000001245555532111111 00 000 0000 1238899999999
Q ss_pred cchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccc
Q 016032 300 GQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
|+.+.++.... ..... .+...+.+++.++ ||.+++||..+|+.+..+....
T Consensus 467 G~~~W~~~~~~--~~~~g-~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 467 QKAAWSVEHVS--PWNGG-TLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp TEEEEEEEESS--SCCCC-EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcEEeecCCCC--CCcCc-ceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 99887765432 23333 4677788888888 9999999999999998886543
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=1.5e-10 Score=97.00 Aligned_cols=234 Identities=10% Similarity=0.051 Sum_probs=143.6
Q ss_pred cccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEE
Q 016032 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYL 142 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i 142 (396)
...-..+..|+|+.+.++++...++.|..||..++.. ..+... ..+.+++++++++++++ . ++.|.+
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~----------~~~~~i~~~~dG~l~v~-~-~~~l~~ 77 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMD----------APVSSVALRQSGGYVAT-I-GTKFCA 77 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECS----------SCEEEEEEBTTSSEEEE-E-TTEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCC----------CceEEEEECCCCCEEEE-E-CCeEEE
Confidence 4445678899997466777777789999999987765 233222 12889999999995554 3 578999
Q ss_pred EeCCCCCCCccceeee--cCCccEEEEEeccCCCCEEEEeeCC---------CcEEEEecCCCCCCCccccCCCCCceeE
Q 016032 143 VDARTNSRSGEAILIH--RKGSKVVGLHCNPIQPELLLSCGND---------HFARIWDIRRLEAGSSLCDLPHKRVVNS 211 (396)
Q Consensus 143 ~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~~~~~~~~~~~~i~~ 211 (396)
||..++.... ..... .....+..+++.| +++++++.... ..-.||.+.... ............+.
T Consensus 78 ~d~~~g~~~~-~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~~~~~~~~~~~png 153 (297)
T 3g4e_A 78 LNWKEQSAVV-LATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDH--HVKKYFDQVDISNG 153 (297)
T ss_dssp EETTTTEEEE-EEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--CEEEEEEEESBEEE
T ss_pred EECCCCcEEE-EEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCC--CEEEEeeccccccc
Confidence 9988754321 11111 1123578999999 88877654321 233455443211 11111223345688
Q ss_pred EEEcCCCCEEEE-EeCCCcEEEEEc--ccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc
Q 016032 212 AYFSPSGSKILT-TSQDNRLRIWDS--IFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA 288 (396)
Q Consensus 212 ~~~~~~~~~l~~-~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 288 (396)
++|+|+++.|+. .+.++.|.+|++ .++.+.. ........ .....+-.++++++ |++.+ +...
T Consensus 154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~--~~~~~~~~-~~~~~p~g~~~d~~---------G~lwv---a~~~ 218 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN--RRSVYKLE-KEEQIPDGMCIDAE---------GKLWV---ACYN 218 (297)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE--EEEEEECC-GGGCEEEEEEEBTT---------SCEEE---EEET
T ss_pred eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC--cEEEEECC-CCCCCCCeeEECCC---------CCEEE---EEcC
Confidence 999999987754 455788999997 3444311 00110000 01122345667766 55554 3344
Q ss_pred ccceEEEEcCccchhhhhcCCCCCCCcceeeec-cCCcEEEee
Q 016032 289 LHPIDFIDITTGQLVAEVMDPNITTISPVNKLH-PRDDVLASG 330 (396)
Q Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~sg 330 (396)
.+.|.+||..+|+.+..+..+. ..+.++ +|. |+++.|+.+
T Consensus 219 ~~~v~~~d~~tG~~~~~i~~p~-~~~t~~-~f~g~d~~~L~vt 259 (297)
T 3g4e_A 219 GGRVIRLDPVTGKRLQTVKLPV-DKTTSC-CFGGKNYSEMYVT 259 (297)
T ss_dssp TTEEEEECTTTCCEEEEEECSS-SBEEEE-EEESGGGCEEEEE
T ss_pred CCEEEEEcCCCceEEEEEECCC-CCceEE-EEeCCCCCEEEEE
Confidence 5679999999899888876654 456666 798 887766543
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.39 E-value=2.2e-11 Score=103.93 Aligned_cols=286 Identities=8% Similarity=-0.140 Sum_probs=172.0
Q ss_pred cEEEEEeCCC----cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----------CCCeEEEEECCCCcc
Q 016032 34 HILLSGDKKG----QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----------SDGTVSCTDLETGLA 99 (396)
Q Consensus 34 ~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~ 99 (396)
+++++-..++ .|.+.|..+.+.+..+..+.. + .+.++|+ +.+++++. .++.|.+||+.+++.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P--~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S--LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C--EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCC-C--ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 4555555555 788999999988888754443 4 7999999 77777775 378999999999999
Q ss_pred cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEE--EeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 100 LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYL--VDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i--~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
+..+..+..... ........++++|+|++++++.. ...+.+ +|+.+ ... +.. .. . +...|....
T Consensus 109 v~~I~v~~~~~~--~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~-i~v-~~--~---~~~~p~g~~ 176 (368)
T 1mda_H 109 IADIELPDAPRF--SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQL-TKS-AS--C---FHIHPGAAA 176 (368)
T ss_dssp EEEEEETTSCSC--CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEE-EEC-SS--C---CCCEEEETT
T ss_pred EEEEECCCcccc--ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceE-EEC-CC--c---eEEccCCCe
Confidence 999876511100 00011567899999999998875 457888 89877 111 111 11 1 122342344
Q ss_pred EEEEeeCCCcEEEEecCC-----CCCCCcc-ccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc--cCCCcc
Q 016032 176 LLLSCGNDHFARIWDIRR-----LEAGSSL-CDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL--DSPSRE 246 (396)
Q Consensus 176 ~l~~~~~d~~i~~wd~~~-----~~~~~~~-~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~ 246 (396)
.+++.+.|+.+.+.|+.+ ++..... ... -...+. . ++++..++..+. +.+.+.|+.+... ......
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~ 251 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCS
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEe
Confidence 566667788888888865 2211000 011 112233 3 666666666666 8999999865321 111000
Q ss_pred ee---ecccccccCCceeEEeCCCCCCCceeeEeeeeeeecc-c-c----cccceEEEEcCccchhhhhcCCCCCCCcce
Q 016032 247 IV---HSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYN-G-A----ALHPIDFIDITTGQLVAEVMDPNITTISPV 317 (396)
Q Consensus 247 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g-~----~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~ 317 (396)
.. ....... ...-.+.++|+. +.+..... . . ..+.+.++|+.+++.+.++..+. ....+
T Consensus 252 ~~~~~~~~~~~p-~g~~~v~~s~dg---------~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi 319 (368)
T 1mda_H 252 NESGRKADNFRS-AGFQMVAKLKNT---------DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAI 319 (368)
T ss_dssp SCTHHHHTTEEE-CSSSCEEEETTT---------TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEE
T ss_pred cccccccccccc-CcceeeEEcCCC---------CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceE
Confidence 00 0000000 000014577763 22221101 0 1 02335599999999988886543 34556
Q ss_pred eeeccCCc-EEEeec--CCcEEEEcCCCcceeeeccccc
Q 016032 318 NKLHPRDD-VLASGS--SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 318 ~~~~~~~~-~l~sg~--d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
+|+|+|+ ++++.. ++.|.++|+.+++.+..+....
T Consensus 320 -~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 320 -IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp -EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred -EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 8999997 445543 8999999999999998887544
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=3.3e-10 Score=95.72 Aligned_cols=201 Identities=10% Similarity=0.067 Sum_probs=131.2
Q ss_pred ccCCeEEEEecCC-CCcEEEEEeCCCcEEEeecccceeeeE-ecC---CcccceeEEEEecCCCcEEEEEeCC-------
Q 016032 19 HSRRVTCLEFHPT-NNHILLSGDKKGQVGVWDFYKVSEKIV-YGN---IHSCIVNNIRFNPTNDGTVYAASSD------- 86 (396)
Q Consensus 19 h~~~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~l~s~~~d------- 86 (396)
+...+.+++++++ + +++++.. .+.|.+||.. +..... ... .....+.++++.++ +.++++...+
T Consensus 69 ~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccc
Confidence 5677999999999 7 5555544 4479999988 544322 211 12245889999998 7777766554
Q ss_pred --------CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeC----CCCCEEEEE-ecCCeEEEEeCC-CCCCCc
Q 016032 87 --------GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDIN----PEKGVVLVA-DNFGFLYLVDAR-TNSRSG 152 (396)
Q Consensus 87 --------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~~g~i~i~d~~-~~~~~~ 152 (396)
+.|..|+.. ++........ .....++++ ++++.++++ ..++.|.+|++. .+....
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~~~----------~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQMIQVDTAF----------QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SCEEEEEEEE----------SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cccccCCCCeEEEECCC-CCEEEeccCC----------CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 567777765 4433222110 125778899 998766555 567899999976 222110
Q ss_pred --cceeeecCC-ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEE-EeCCC
Q 016032 153 --EAILIHRKG-SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILT-TSQDN 228 (396)
Q Consensus 153 --~~~~~~~~~-~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~ 228 (396)
.......+. ..+..+++++ +++++++...++.|.+||..+.+....+. .+...+.+++|+|+++.|++ ...++
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~ 290 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIR--CPFEKPSNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEE--CSSSCEEEEEECTTSSEEEEEETTTT
T ss_pred ceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEe--CCCCCceeEEECCCCCEEEEEeCCCC
Confidence 011111111 3578899999 88888888788899999987544332222 24467899999999995554 45568
Q ss_pred cEEEEEccc
Q 016032 229 RLRIWDSIF 237 (396)
Q Consensus 229 ~i~iwd~~~ 237 (396)
.|..|++..
T Consensus 291 ~l~~~~~~~ 299 (314)
T 1pjx_A 291 AVWKFEWQR 299 (314)
T ss_dssp EEEEEECSS
T ss_pred eEEEEeCCC
Confidence 899999864
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=7.8e-11 Score=102.17 Aligned_cols=260 Identities=10% Similarity=-0.026 Sum_probs=158.8
Q ss_pred CCccceeeeccccCCeEEEEecCCCCcEEEEEe---------CCCcEEEeecccceeeeEecCC------cccceeEEEE
Q 016032 8 PDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGD---------KKGQVGVWDFYKVSEKIVYGNI------HSCIVNNIRF 72 (396)
Q Consensus 8 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~ 72 (396)
.+.+.+..+..-..+ .++++|++..++++.. .++.|.++|..+.+....+..+ .......+.|
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~ 184 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL 184 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE
T ss_pred CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE
Confidence 344444555544444 8999999954444432 4678999999998777665321 1234568899
Q ss_pred ecCCCcEEEEEeC--CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCC
Q 016032 73 NPTNDGTVYAASS--DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNS 149 (396)
Q Consensus 73 ~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~ 149 (396)
+|+ +++++++.. ++.|.+.|+.+++.+..+..... ....|+ ...+++.+.+|.+.+.+...++
T Consensus 185 spD-Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-------------~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 185 TPD-NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-------------YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-------------EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cCC-CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-------------eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 999 888888764 57899999999998887765311 112222 2445555666666666663332
Q ss_pred CCcc---ceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCC--CCccccC-----C---CCCceeEEEEcC
Q 016032 150 RSGE---AILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA--GSSLCDL-----P---HKRVVNSAYFSP 216 (396)
Q Consensus 150 ~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~-----~---~~~~i~~~~~~~ 216 (396)
.... .+..... .....+.+.+ ++..++..+..+.|.+.|+..... ...+... . .......++++|
T Consensus 251 v~~~~~~~~~v~~~-p~~~~~~~~~-dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 251 TKVTNTEVFHTEDE-LLINHPAFSL-RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp CEEEECCCCSCTTS-CBCSCCEECT-TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred EEEEeeeeeccCCC-ceeeEeeecC-CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 2210 0000000 0112346677 666666667788999999854321 0111000 0 111222378999
Q ss_pred CCCEEEEEeC----------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee-eeeeecc
Q 016032 217 SGSKILTTSQ----------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR-YISENYN 285 (396)
Q Consensus 217 ~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~ 285 (396)
+++.+++... .+.|.++|+.+.+.+.... .. ..+..+.|+|+ |+ ++. +
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~-------vg--~~P~gia~spD---------g~~~ly---v 387 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE-------LG--HEIDSINVSQD---------AEPLLY---A 387 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-------EE--EEECEEEECCS---------SSCEEE---E
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE-------CC--CCcCeEEEccC---------CCEEEE---E
Confidence 9888777642 3579999999887654221 11 12457889998 55 444 2
Q ss_pred cc-cccceEEEEcCccchhhhh
Q 016032 286 GA-ALHPIDFIDITTGQLVAEV 306 (396)
Q Consensus 286 g~-~d~~i~vwd~~~~~~~~~~ 306 (396)
.. .++.|.|+|+.+++.+.++
T Consensus 388 ~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 388 LSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EETTTTEEEEEETTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCCEEEEe
Confidence 33 5899999999999998886
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=3.9e-09 Score=89.53 Aligned_cols=196 Identities=9% Similarity=-0.001 Sum_probs=126.9
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
-..+..|+|+++.++++...++.|..||..++...... ....+.+++|.|+ +.++++. .+ .|.+||..+++...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~v~~i~~~~d-g~l~v~~-~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA---LPFMGSALAKISD-SKQLIAS-DD-GLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---CSSCEEEEEEEET-TEEEEEE-TT-EEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE---CCCcceEEEEeCC-CeEEEEE-CC-CEEEEECCCCcEEE
Confidence 45688999986678888888899999999876543322 3467999999998 7766654 44 49999998877543
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
...... ......+..++++|+|+++++... .+.|+.++ .++. . ...........++|+| +++
T Consensus 124 ~~~~~~-----~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~---~~~~~~~~~~~i~~s~-dg~ 191 (326)
T 2ghs_A 124 HAELES-----DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-T---KLFADISIPNSICFSP-DGT 191 (326)
T ss_dssp EECSST-----TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-E---EEEEEESSEEEEEECT-TSC
T ss_pred EeeCCC-----CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-E---EeeCCCcccCCeEEcC-CCC
Confidence 322111 011134889999999997665542 25666666 3221 1 1111112467899999 887
Q ss_pred EEE-EeeCCCcEEEEecC--CC-CCC--CccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 176 LLL-SCGNDHFARIWDIR--RL-EAG--SSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 176 ~l~-~~~~d~~i~~wd~~--~~-~~~--~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
.++ +.+.++.|.+|++. ++ ... ..+..+ .....+..++++++|.+.++...++.|.+||.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 654 44567899999985 33 211 112111 23355678888888877766655677888876
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=1.7e-09 Score=90.47 Aligned_cols=209 Identities=12% Similarity=0.123 Sum_probs=138.1
Q ss_pred eccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECC
Q 016032 16 IRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLE 95 (396)
Q Consensus 16 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (396)
+..+..-..+..|+|++..++++...++.|..||..++.... +. ....+.+++++|+ +.++++ . ++.|.+||..
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~--~~~~~~~i~~~~d-G~l~v~-~-~~~l~~~d~~ 81 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-VT--MDAPVSSVALRQS-GGYVAT-I-GTKFCALNWK 81 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EE--CSSCEEEEEEBTT-SSEEEE-E-TTEEEEEETT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-Ee--CCCceEEEEECCC-CCEEEE-E-CCeEEEEECC
Confidence 444555667899999765788888888999999998765432 22 4567999999999 775444 4 5679999998
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-----------CCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-----------FGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
+++.......... .....+..++++|+|+++++... .+.|+.++.. ..... ........
T Consensus 82 ~g~~~~~~~~~~~-----~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~---~~~~~~~p 151 (297)
T 3g4e_A 82 EQSAVVLATVDND-----KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD--HHVKK---YFDQVDIS 151 (297)
T ss_dssp TTEEEEEEECCTT-----CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT--SCEEE---EEEEESBE
T ss_pred CCcEEEEEecCCC-----CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC--CCEEE---Eeeccccc
Confidence 8765433322111 11234789999999997665532 2345555543 21111 11122256
Q ss_pred EEEEeccCCCCEE-EEeeCCCcEEEEecC--CCCC--CCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 165 VGLHCNPIQPELL-LSCGNDHFARIWDIR--RLEA--GSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 165 ~~~~~~~~~~~~l-~~~~~d~~i~~wd~~--~~~~--~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
..++|+| +++.| ++.+.++.|.+|++. ++.. ...+..+ .....+..++++++|++.++....+.|..||..++
T Consensus 152 ngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 152 NGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 8999999 88755 556667899999973 2221 1112222 23456789999999988877777888999999887
Q ss_pred ccc
Q 016032 239 NLD 241 (396)
Q Consensus 239 ~~~ 241 (396)
+.+
T Consensus 231 ~~~ 233 (297)
T 3g4e_A 231 KRL 233 (297)
T ss_dssp CEE
T ss_pred eEE
Confidence 754
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2.5e-11 Score=103.75 Aligned_cols=153 Identities=14% Similarity=0.041 Sum_probs=108.5
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccce---eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEE
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSL---MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYL 142 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i 142 (396)
+++.+++++. ..++++|+.++ +.+|++...+.... ....... ...... |+.++| ++..|+++ .++.|++
T Consensus 39 ~~nlLais~~-~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~--~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW--EKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE--EEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCC-CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE--EeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 6899999999 88999999875 56698765431000 0000000 001113 889999 89999998 8899999
Q ss_pred EeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEE
Q 016032 143 VDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKIL 222 (396)
Q Consensus 143 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 222 (396)
||+.+..... ..+.+...+.++.+.+ . .+++++.||.|.+||+.+.... . +...|++++|||+| ++
T Consensus 111 ~dv~sl~~~~---~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~---~---~~~~Vs~v~WSpkG--~~ 176 (388)
T 1xip_A 111 LDLEELSEFR---TVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTK---Q---LAQNVTSFDVTNSQ--LA 176 (388)
T ss_dssp EESSSTTCEE---EEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEE---E---EEESEEEEEECSSE--EE
T ss_pred EEchhhhccC---ccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCccc---c---ccCCceEEEEcCCc--eE
Confidence 9998865322 2233344688887775 2 3888899999999999754432 1 34579999999999 67
Q ss_pred EEeCCCcEEEEEcccccc
Q 016032 223 TTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 223 ~~~~d~~i~iwd~~~~~~ 240 (396)
.|..||.+++|+...++.
T Consensus 177 vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEETTSCEEEEEEETTEE
T ss_pred EEEcCCcEEEEcCCCccc
Confidence 889999999998876663
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=2.1e-10 Score=107.10 Aligned_cols=271 Identities=15% Similarity=0.101 Sum_probs=160.1
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCC-cccceeEEEEec--CCCcEEEEEe------CCCeEEEEECCCCcccceeec
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNI-HSCIVNNIRFNP--TNDGTVYAAS------SDGTVSCTDLETGLALSLMNV 105 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~ 105 (396)
.|+.++.|+.|..+|..+++.+...... +......+...| . +..++.++ .++.|..||..+|+.+..+..
T Consensus 123 ~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 5778888999999999999888776432 211111111111 1 23444443 378999999999998877653
Q ss_pred CCC-CCCCC---------------------CcceeeeEEEeCCCCCEEEEEecCCe-------------------EEEEe
Q 016032 106 NPN-GWHGP---------------------RTWRMLYGMDINPEKGVVLVADNFGF-------------------LYLVD 144 (396)
Q Consensus 106 ~~~-~~~~~---------------------~~~~~v~~~~~~~~~~~l~~~~~~g~-------------------i~i~d 144 (396)
.+. ..... ........++++|+...++++..++. |..+|
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD 281 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVN 281 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEE
Confidence 211 00000 00001135778898899999887764 99999
Q ss_pred CCCCCCCccceeeec------CCccEEEEEeccCCCC---EEEEeeCCCcEEEEecCCCCCCCccccCC-----------
Q 016032 145 ARTNSRSGEAILIHR------KGSKVVGLHCNPIQPE---LLLSCGNDHFARIWDIRRLEAGSSLCDLP----------- 204 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----------- 204 (396)
..+++........+. ...+........ ++. .++.++.+|.++++|.++++.........
T Consensus 282 ~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 282 ADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred ccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 999876654322111 111122222222 443 78889999999999998766431110000
Q ss_pred ---------------CC-----------CceeEEEEcCCCCEEEEEeCC-------------------------------
Q 016032 205 ---------------HK-----------RVVNSAYFSPSGSKILTTSQD------------------------------- 227 (396)
Q Consensus 205 ---------------~~-----------~~i~~~~~~~~~~~l~~~~~d------------------------------- 227 (396)
.. ..-..++|+|+..++++...+
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 00 011237899988888876433
Q ss_pred --------------CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceE
Q 016032 228 --------------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPID 293 (396)
Q Consensus 228 --------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~ 293 (396)
|.|..||+.+++..-... .. .|. ....+...|.+++ .|+.|+.|+
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-----~~------------~~~-~~g~~~tagglvf---~gt~dg~l~ 499 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP-----YV------------TIF-NGGTLSTAGNLVF---EGSADGRVI 499 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE-----ES------------SSC-CCCEEEETTTEEE---EECTTSEEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEcc-----CC------------CCc-cCccceECCCEEE---EECCCCcEE
Confidence 556667776665422100 00 000 1123333455555 678999999
Q ss_pred EEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 294 FIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 294 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
.||..+|+.+.++..+.......+ .|..+|+..++
T Consensus 500 a~D~~tG~~lw~~~~~~~~~~~p~-ty~~~G~qyv~ 534 (689)
T 1yiq_A 500 AYAADTGEKLWEQPAASGVMAAPV-TYSVDGEQYVT 534 (689)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEE
T ss_pred EEECCCCccceeeeCCCCcccCce-EEEECCEEEEE
Confidence 999999999988876654444555 68888875443
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.33 E-value=7.2e-10 Score=93.20 Aligned_cols=206 Identities=10% Similarity=0.050 Sum_probs=133.6
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
.+..+..+........|+|+++.+++++..++.|..|+.. +.. ..+ ..+...+..++++++ +.++++...++.|.+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~-~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVL-LDATAFTNGNAVDAQ-QRLVHCEHGRRAITR 111 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEE-EESCSCEEEEEECTT-SCEEEEETTTTEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEE-eCCCCccceeeECCC-CCEEEEECCCCEEEE
Confidence 3455666667788999999996588888888999999984 332 222 225567899999998 776666556688999
Q ss_pred EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEE----Eec-------------CCeEEEEeCCCCCCCccc
Q 016032 92 TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV----ADN-------------FGFLYLVDARTNSRSGEA 154 (396)
Q Consensus 92 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------~g~i~i~d~~~~~~~~~~ 154 (396)
|+.. ++........ .. .....+..+++.++|+++++ |.. .+.|+.+|..+++... .
T Consensus 112 ~~~~-g~~~~~~~~~-~~----~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~-~ 184 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRY-AG----KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR-M 184 (305)
T ss_dssp ECTT-SCEEEEECEE-TT----EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE-E
T ss_pred ECCC-CCEEEEEecc-CC----CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE-E
Confidence 9986 5432221111 00 00122678999999998876 331 3568888876654322 1
Q ss_pred eeeecCCccEEEEEeccCCCCEEEEeeCC------CcEEEEecCCCCC--CCccccCCCCCceeEEEEcCCCCEEEEEeC
Q 016032 155 ILIHRKGSKVVGLHCNPIQPELLLSCGND------HFARIWDIRRLEA--GSSLCDLPHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
. .......++|+| ++..|+.+... +.|++|++..... ...+.. .....+..++++++|++. +++.
T Consensus 185 -~---~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~pdgi~~d~~G~lw-v~~~ 257 (305)
T 3dr2_A 185 -A---DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLPDGFCVDRGGWLW-SSSG 257 (305)
T ss_dssp -E---EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCCCSEEECTTSCEE-ECCS
T ss_pred -e---cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCCCeEEECCCCCEE-EecC
Confidence 1 122578899999 88877766554 6899999864321 011111 123445678999999844 4444
Q ss_pred CCcEEEEEcc
Q 016032 227 DNRLRIWDSI 236 (396)
Q Consensus 227 d~~i~iwd~~ 236 (396)
+ .|.+|+..
T Consensus 258 ~-gv~~~~~~ 266 (305)
T 3dr2_A 258 T-GVCVFDSD 266 (305)
T ss_dssp S-EEEEECTT
T ss_pred C-cEEEECCC
Confidence 4 49999984
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=1.5e-09 Score=94.13 Aligned_cols=269 Identities=12% Similarity=0.071 Sum_probs=161.6
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCc--------cccee-EEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeec
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIH--------SCIVN-NIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNV 105 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 105 (396)
.+++++.++.|..+|..+++......... ...+. .+.. . +..++.++.++.|..+|..+++.+.....
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--S-GGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--E-TTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--e-CCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 47777788999999999888776653211 12222 2222 2 56788888899999999999998877655
Q ss_pred CCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccE------EEEEeccCCCCEEEE
Q 016032 106 NPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKV------VGLHCNPIQPELLLS 179 (396)
Q Consensus 106 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~~l~~ 179 (396)
..... ..... .+..+++++.++.|..+|..+++....... ...+ ..... .+..++.
T Consensus 132 ~~~~~---------~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~----~~~~~~~~~~~~~~~---~~~~v~~ 193 (376)
T 3q7m_A 132 AGEAL---------SRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL----DMPSLSLRGESAPTT---AFGAAVV 193 (376)
T ss_dssp SSCCC---------SCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC----CC-----CCCCCCEE---ETTEEEE
T ss_pred CCceE---------cCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC----CCCceeecCCCCcEE---ECCEEEE
Confidence 43211 01111 245788889999999999998765543211 1111 11122 2356777
Q ss_pred eeCCCcEEEEecCCCCCCCccccCCCCC-----ceeEEEEcC--CCCEEEEEeCCCcEEEEEcccccccCCCcceeeccc
Q 016032 180 CGNDHFARIWDIRRLEAGSSLCDLPHKR-----VVNSAYFSP--SGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHD 252 (396)
Q Consensus 180 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 252 (396)
++.++.|..+|..+++............ .+..+...| .+..+++++.++.+..+|..+++..... .
T Consensus 194 g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~-------~ 266 (376)
T 3q7m_A 194 GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR-------E 266 (376)
T ss_dssp CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE-------C
T ss_pred EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec-------c
Confidence 8889999999987655422221110000 000011111 3467778888999999999988753211 0
Q ss_pred ccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-
Q 016032 253 FNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS- 331 (396)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~- 331 (396)
.... ......+..+. .++.++.|..+|..+|+.+.............. .. .+..|+.++
T Consensus 267 ~~~~--------------~~~~~~~~~l~---~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~-~~--~~~~l~v~~~ 326 (376)
T 3q7m_A 267 LGSV--------------NDFIVDGNRIY---LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP-VL--YNGNLVVGDS 326 (376)
T ss_dssp CCCE--------------EEEEEETTEEE---EEETTCCEEEEETTTCCEEEEECTTTTSCCCCC-EE--ETTEEEEECT
T ss_pred CCCC--------------CCceEECCEEE---EEcCCCeEEEEECCCCcEEEeecccCCCcccCC-EE--ECCEEEEEeC
Confidence 0000 01112233333 356678899999999987765542221223322 22 345566666
Q ss_pred CCcEEEEcCCCcceeeeccc
Q 016032 332 SRSIFIWRPKEKSELVEQKE 351 (396)
Q Consensus 332 d~~i~iw~~~~~~~~~~~~~ 351 (396)
+|.|+++|..+++.+.....
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEec
Confidence 89999999999998877654
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=5.1e-09 Score=90.86 Aligned_cols=265 Identities=13% Similarity=0.093 Sum_probs=153.2
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCC
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPR 114 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 114 (396)
.++.++.++.|..+|..+++....... ........... +..++.++.++.|..+|..+++.+..............
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~-~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKV-AGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeC-CCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 467778899999999998887766532 21111122222 45788888899999999999998877665432110000
Q ss_pred cceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC----ccEEEEEecc-CCCCEEEEeeCCCcEEEE
Q 016032 115 TWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG----SKVVGLHCNP-IQPELLLSCGNDHFARIW 189 (396)
Q Consensus 115 ~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~----~~i~~~~~~~-~~~~~l~~~~~d~~i~~w 189 (396)
...... .+..++++..++.+..+|..+++............ ..+..+...| ..+..++.++.++.|..+
T Consensus 181 ----~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 181 ----ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp ----CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred ----CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 011111 14568888889999999998876554321111000 0000011111 024567777889999999
Q ss_pred ecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCC
Q 016032 190 DIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDP 269 (396)
Q Consensus 190 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
|..+++..... . ......+.. ++..|++++.++.|..+|..+++..-... .... ..
T Consensus 255 d~~tG~~~w~~---~-~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~------~~~~------------~~ 310 (376)
T 3q7m_A 255 DLRSGQIMWKR---E-LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQS------DLLH------------RL 310 (376)
T ss_dssp ETTTCCEEEEE---C-CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEEC------TTTT------------SC
T ss_pred ECCCCcEEeec---c-CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeec------ccCC------------Cc
Confidence 99765542221 1 122344444 46678888889999999999887532100 0000 00
Q ss_pred CCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEc
Q 016032 270 SESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWR 339 (396)
Q Consensus 270 ~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~ 339 (396)
.....+.+..+. .++.+|.|.++|..+|+.+..+.... ..+... ....++ .|+.++ +|.|+.|+
T Consensus 311 ~~~~~~~~~~l~---v~~~~g~l~~~d~~tG~~~~~~~~~~-~~~~~~-~~~~~~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 311 LTSPVLYNGNLV---VGDSEGYLHWINVEDGRFVAQQKVDS-SGFQTE-PVAADG-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCCCEEETTEEE---EECTTSEEEEEETTTCCEEEEEECCT-TCBCSC-CEEETT-EEEEEBTTSCEEEEE
T ss_pred ccCCEEECCEEE---EEeCCCeEEEEECCCCcEEEEEecCC-CcceeC-CEEECC-EEEEEeCCCEEEEEe
Confidence 011112233333 46778999999999999887765433 222222 122344 455555 89999886
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.30 E-value=7.2e-10 Score=103.24 Aligned_cols=269 Identities=17% Similarity=0.140 Sum_probs=163.0
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCcc----cceeE-EEEecCCCcEEEEEeC------CCeEEEEECCCCccccee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHS----CIVNN-IRFNPTNDGTVYAASS------DGTVSCTDLETGLALSLM 103 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~ 103 (396)
.|+.++.|+.|..+|..+++.+..+..... ..+.. .... +..++.++. ++.|+.+|..+|+.+..+
T Consensus 130 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~---~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF---KGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE---CCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 577788899999999999988877643201 11211 1111 345555543 799999999999998877
Q ss_pred ecCCCCCCCC-----------------------CcceeeeEEEeCCCCCEEEEEecCC-------------------eEE
Q 016032 104 NVNPNGWHGP-----------------------RTWRMLYGMDINPEKGVVLVADNFG-------------------FLY 141 (396)
Q Consensus 104 ~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~~~~g-------------------~i~ 141 (396)
.......... ........++++|++..++++..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 6543221000 0001123577889999998887664 599
Q ss_pred EEeCCCCCCCccceeeecC------CccEEEEEeccCCC---CEEEEeeCCCcEEEEecCCCCCCCccccCC--------
Q 016032 142 LVDARTNSRSGEAILIHRK------GSKVVGLHCNPIQP---ELLLSCGNDHFARIWDIRRLEAGSSLCDLP-------- 204 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------- 204 (396)
.+|..+++........+.. .....-+.... ++ ..++.++.+|.|+++|..+++....+....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 9999998765543221110 11122223333 55 678899999999999998766432221100
Q ss_pred -CCCce------------------------eEEEEcCCCCEEEEEeCC--------------------------------
Q 016032 205 -HKRVV------------------------NSAYFSPSGSKILTTSQD-------------------------------- 227 (396)
Q Consensus 205 -~~~~i------------------------~~~~~~~~~~~l~~~~~d-------------------------------- 227 (396)
...++ ..++++|+..++++...+
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 00001 257899988888776542
Q ss_pred -----------CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEE
Q 016032 228 -----------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFID 296 (396)
Q Consensus 228 -----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd 296 (396)
|.|..||+.+++..-... ... | .....+...|..++ .++.++.+++||
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-----~~~------------~-~~~g~~~~~g~~v~---~g~~dg~l~a~D 504 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVE-----HVS------------P-WNGGTLTTAGNVVF---QGTADGRLVAYH 504 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEE-----ESS------------S-CCCCEEEETTTEEE---EECTTSEEEEEE
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecC-----CCC------------C-CcCcceEeCCCEEE---EECCCCcEEEEE
Confidence 567778887776532110 000 0 00122333355555 578899999999
Q ss_pred cCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 297 ITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
..+|+.+.++..+.......+ .|.++|+.++.
T Consensus 505 ~~tG~~lw~~~~~~~~~~~p~-~y~~~G~~~v~ 536 (677)
T 1kb0_A 505 AATGEKLWEAPTGTGVVAAPS-TYMVDGRQYVS 536 (677)
T ss_dssp TTTCCEEEEEECSSCCCSCCE-EEEETTEEEEE
T ss_pred CCCCceeeeeeCCCCcccCCE-EEEeCCEEEEE
Confidence 999999998886654444455 67788875544
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.29 E-value=4.1e-10 Score=105.71 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=145.0
Q ss_pred CcccceeEEEEecCCCcEEEEE-----eCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAA-----SSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 136 (396)
+|...+..++|+|+ +++|+.+ +....|++||+.+++.+... ... .....++|+ |++.|+.+..
T Consensus 126 ~~~~~l~~~~~SpD-g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~---------~k~~~~~Ws-Dg~~l~y~~~ 193 (693)
T 3iuj_A 126 DGTTALDQLSFSRD-GRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKD---------VKFSGISWL-GNEGFFYSSY 193 (693)
T ss_dssp TSCCEEEEEEECTT-SSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEE---------EESCCCEEE-TTTEEEEEES
T ss_pred CCcEEEEEEEECCC-CCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCC---------ceeccEEEe-CCCEEEEEEe
Confidence 45567889999999 7777643 22357999999999864431 100 113567899 9999998877
Q ss_pred CC-------------eEEEEeCCCCCCCcccee-eec-CCccEEEEEeccCCCCEEEEeeC----CCcEEEEecCCCCC-
Q 016032 137 FG-------------FLYLVDARTNSRSGEAIL-IHR-KGSKVVGLHCNPIQPELLLSCGN----DHFARIWDIRRLEA- 196 (396)
Q Consensus 137 ~g-------------~i~i~d~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~- 196 (396)
+. .|++|++.+.......+. ... +......+.|+| ++.+|+.... ...|+++|+.+...
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~ 272 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAP 272 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred cCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence 64 499999887653222222 112 233578899999 8887754432 35899999876431
Q ss_pred CCccccCCCCCceeEEEEcCCCCEEEEEe-CC---CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCc
Q 016032 197 GSSLCDLPHKRVVNSAYFSPSGSKILTTS-QD---NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSES 272 (396)
Q Consensus 197 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (396)
...+ ..+....... |+++|..|+..+ .+ +.|..+|+.++.... ...+.... . ..+ .|++.
T Consensus 273 ~~~l--~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~---~--~~~--~~s~~----- 336 (693)
T 3iuj_A 273 LLTV--QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPER---Q--QVL--TVHSG----- 336 (693)
T ss_dssp CEEE--ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCC---S--SCE--EEEEE-----
T ss_pred eEEE--eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCC---C--CEE--EEEEE-----
Confidence 1222 2344444444 666666655444 33 578899988764311 01111100 0 111 45554
Q ss_pred eeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-C----CcEEEEcCCCcce
Q 016032 273 LAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-S----RSIFIWRPKEKSE 345 (396)
Q Consensus 273 ~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d----~~i~iw~~~~~~~ 345 (396)
+++++....-.....|++|++..+. ...+..+....+..+ .+++++..|+... + +.|+.||+.+++.
T Consensus 337 ----g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~-~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 337 ----SGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGF-NGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ----TTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEEC-CCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ----CCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEee-ecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 4444422111222478999987443 334433332334444 6778877665433 3 8999999987763
No 228
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=5.4e-09 Score=97.31 Aligned_cols=306 Identities=13% Similarity=0.096 Sum_probs=176.4
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCccc---------ce-eEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSC---------IV-NNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMN 104 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~v-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 104 (396)
.|+.++.++.|.-+|..+++.+..+...... .+ ..+.+. +..++.++.|+.|..+|..+|+.+..+.
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 4666777889999999999888776421110 00 122332 4678888899999999999999988776
Q ss_pred cCCCCCCCCCcceeeeEEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeec-------------------
Q 016032 105 VNPNGWHGPRTWRMLYGMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHR------------------- 159 (396)
Q Consensus 105 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~------------------- 159 (396)
.............++ + .+..++++.. +|.|+.+|..+++..........
T Consensus 145 ~~~~~~~~~~~~~P~----v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 145 TTDPAKPYSITGAPR----V--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp CSCTTSSCBCCSCCE----E--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred cCCCCCcceecCCCE----E--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 532110000000001 1 1345555543 58999999998876544321100
Q ss_pred ---------CCccEEEEEeccCCCCEEEEeeCCC-------------------cEEEEecCCCCCCCccccCCCC-----
Q 016032 160 ---------KGSKVVGLHCNPIQPELLLSCGNDH-------------------FARIWDIRRLEAGSSLCDLPHK----- 206 (396)
Q Consensus 160 ---------~~~~i~~~~~~~~~~~~l~~~~~d~-------------------~i~~wd~~~~~~~~~~~~~~~~----- 206 (396)
.......+++.| ...+++.++.++ .|..+|.++++..-..+...|.
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred ccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 001112467777 677788877665 3899998876654333322221
Q ss_pred --CceeEEEEcCCCC---EEEEEeCCCcEEEEEcccccccCCCccee---------------ecc--cccc---------
Q 016032 207 --RVVNSAYFSPSGS---KILTTSQDNRLRIWDSIFGNLDSPSREIV---------------HSH--DFNR--------- 255 (396)
Q Consensus 207 --~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------------~~~--~~~~--------- 255 (396)
.++....+..+|+ .++.++.+|.+.++|..+|+++....... ... .+..
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 2333233333665 68899999999999999998762111000 000 0000
Q ss_pred --cCCceeEEeCCCCCCCceeeEe----------------e-eeee------ec-ccccccceEEEEcCccchhhhhcCC
Q 016032 256 --HLTPFRAEWDPKDPSESLAVIG----------------R-YISE------NY-NGAALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 256 --~~~~~~~~~~~~~~~~~~~~~g----------------~-~~~~------~~-~g~~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
...--.++++|+.....+.... . ++.. .+ ....++.|..||+.+|+.+.+...+
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 0000013455543221111100 0 0000 00 1224588999999999988776543
Q ss_pred CCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccc
Q 016032 310 NITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 310 ~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
. ..... .+...+.+|+.|+ |+.|+.||..+|+.+..++...
T Consensus 458 ~--~~~~~-~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 458 T--HWNGG-TLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp S--SCCCC-EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred C--CCcCc-eeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 2 22222 4556778888888 9999999999999988876543
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.23 E-value=1.7e-09 Score=92.86 Aligned_cols=241 Identities=11% Similarity=0.095 Sum_probs=138.1
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCC----cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC------CeEEEE
Q 016032 74 PTNDGTVYAASSDGTVSCTDLETG----LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF------GFLYLV 143 (396)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------g~i~i~ 143 (396)
++...+++++..+++|.++|+.+. +....++. ..............+...|++ .++++..+ |.|.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~--~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEP--EEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECH--HHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeech--hhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 663344555667899999999755 33333310 000000011235667888999 66666555 789999
Q ss_pred eCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee-------------------CCCcEEEEecCCCCCCCccccCC
Q 016032 144 DARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG-------------------NDHFARIWDIRRLEAGSSLCDLP 204 (396)
Q Consensus 144 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~~~ 204 (396)
|..+.+..............-..+.|+| +++.+++.. ....|.+||+.+.+....+..-.
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 9998776654322211112234578899 888888874 36899999998654333332211
Q ss_pred CCCceeEEEE--cCCCCEEEEEe------CCCcEEEEEcccccccCCCcce-eec-----------ccccc-cCCceeEE
Q 016032 205 HKRVVNSAYF--SPSGSKILTTS------QDNRLRIWDSIFGNLDSPSREI-VHS-----------HDFNR-HLTPFRAE 263 (396)
Q Consensus 205 ~~~~i~~~~~--~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~-~~~-----------~~~~~-~~~~~~~~ 263 (396)
.......+.| +|+++++++++ .+++|.+|....+.... ...+ +.. ..+.. ...+..+.
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCCCccccccccccccccccCCCceeEEE
Confidence 2234455656 99999988777 45688887765543210 0000 000 00000 12344667
Q ss_pred eCCCCCCCceeeEeeeeeeecccccccceEEEEcCc---cchhhhhcCCCC---------C----CCcceeeeccCCcEE
Q 016032 264 WDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT---GQLVAEVMDPNI---------T----TISPVNKLHPRDDVL 327 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~---~~~~~~~~~~~~---------~----~i~~~~~~~~~~~~l 327 (396)
.+|+ |+++.. +....+.|.+||+.. .+++..+..... . .-..+ +++|+|++|
T Consensus 328 lS~D---------GrfLYV--Snrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~-~lSpDGk~L 395 (462)
T 2ece_A 328 ISLD---------DKFLYL--SLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML-EISRDGRRV 395 (462)
T ss_dssp ECTT---------SCEEEE--EETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE-EECTTSSEE
T ss_pred ECCC---------CCEEEE--EeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE-EEcCCCCEE
Confidence 7777 777763 233457899999853 234433332210 0 13445 799999988
Q ss_pred Eeec
Q 016032 328 ASGS 331 (396)
Q Consensus 328 ~sg~ 331 (396)
+++.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8765
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.18 E-value=6.1e-09 Score=92.63 Aligned_cols=281 Identities=10% Similarity=0.095 Sum_probs=174.1
Q ss_pred EEEEEeCCCcEEEeecccceeeeEec---------------------CC-----------c------ccceeEEEEec--
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYG---------------------NI-----------H------SCIVNNIRFNP-- 74 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~---------------------~~-----------~------~~~v~~~~~~~-- 74 (396)
.+.||+..|.++|+-+.+++.+..+. .+ + .+.......+.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 36788889999999887766554421 00 0 11223344554
Q ss_pred ---CCCcEEEEEe-CCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEe-C-CCCCEEEEEe-------------
Q 016032 75 ---TNDGTVYAAS-SDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDI-N-PEKGVVLVAD------------- 135 (396)
Q Consensus 75 ---~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------- 135 (396)
+ +++++.+. .+..|.+.|+.+.++...+..+... .+..+++ + |++.++++++
T Consensus 97 g~~D-G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~--------~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 97 GKYD-GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAK--------GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp TEEE-EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCC--------SEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred CCcC-CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCC--------CCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 5 55665554 4668999999999988866554321 1677887 5 9999998884
Q ss_pred -----cCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCC--------------------------
Q 016032 136 -----NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDH-------------------------- 184 (396)
Q Consensus 136 -----~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-------------------------- 184 (396)
.++.+.++|..+.+...+..... ....++++| ++.++++.+.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg----~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG----NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS----CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC----CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence 24578999999866554432211 245677888 888888877543
Q ss_pred ------------cEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccc-----cCCCcc
Q 016032 185 ------------FARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNL-----DSPSRE 246 (396)
Q Consensus 185 ------------~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~-----~~~~~~ 246 (396)
.|.+.|.++.+....+..+.-.....++.++|||+++++++ .+.+|.++|+.+.+. +.+...
T Consensus 243 ~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 243 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp HHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred EeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence 36666665421111122222234567899999999887665 578999999986531 111111
Q ss_pred eeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCc----------cchhhhhcCCCC----C
Q 016032 247 IVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITT----------GQLVAEVMDPNI----T 312 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~----------~~~~~~~~~~~~----~ 312 (396)
. .....-...|...+|+|+ |.... +--.+++|.+||+.+ .+.+.++..+.. .
T Consensus 323 v--~~~v~vG~gP~h~aF~~d---------G~aY~---t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 323 V--VAEPELGLGPLHTAFDGR---------GNAYT---SLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp E--EECCBCCSCEEEEEECTT---------SEEEE---EETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred e--EEEcCCCCCcceEEECCC---------CeEEE---EEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 1 112333455678899998 52222 345678899999977 333444443321 1
Q ss_pred CCcceeeeccCCcEEEeec--C-CcE-----------EEEcCCCcc
Q 016032 313 TISPVNKLHPRDDVLASGS--S-RSI-----------FIWRPKEKS 344 (396)
Q Consensus 313 ~i~~~~~~~~~~~~l~sg~--d-~~i-----------~iw~~~~~~ 344 (396)
.-... .++|||++|+++. . ..+ .++|+..++
T Consensus 389 ~~~g~-t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 389 TVMGE-TLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp ETTTT-STTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eccce-EeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 11223 5799999999965 2 344 889986554
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.17 E-value=2.3e-08 Score=80.63 Aligned_cols=211 Identities=9% Similarity=-0.028 Sum_probs=141.2
Q ss_pred ccceeeeccccC--CeEEEEecCCCCcEEEEEeC--CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC
Q 016032 10 QVNCAVIRYHSR--RVTCLEFHPTNNHILLSGDK--KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS 85 (396)
Q Consensus 10 ~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 85 (396)
.+.+..+. |.. ....++|+|++ +++++.+. ++.|++.|+.+++....+..+.......+++.. +...++.-.
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~ 84 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWL 84 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETT
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEec
Confidence 33445553 543 36799999987 66666543 579999999998877776422222333555552 445555566
Q ss_pred CCeEEEEECCCCcccceeecC-CCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec--CCc
Q 016032 86 DGTVSCTDLETGLALSLMNVN-PNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR--KGS 162 (396)
Q Consensus 86 dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~--~~~ 162 (396)
++.+.++|..+.+.+..+... +. ...++++++.++++..++.|.++|..+.+.......... .-.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~------------g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD------------GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS------------CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEECCCCcEEEEEECCCCC------------eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 899999999999998888654 21 122455777777777889999999998766544432221 111
Q ss_pred cEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCC-----------CCCceeEEEEcCCCCEE-EEEeCCCcE
Q 016032 163 KVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-----------HKRVVNSAYFSPSGSKI-LTTSQDNRL 230 (396)
Q Consensus 163 ~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l-~~~~~d~~i 230 (396)
.++.+.|. ++.+++....++.|.+.|..+++....+...+ .....+.++|+|+++.| +++...+.+
T Consensus 153 ~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 153 RLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp CEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred cceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 36677877 56666666678899999998866544443211 11356899999988755 555567889
Q ss_pred EEEEcccc
Q 016032 231 RIWDSIFG 238 (396)
Q Consensus 231 ~iwd~~~~ 238 (396)
...++...
T Consensus 231 ~~i~l~~~ 238 (266)
T 2iwa_A 231 FEIKLHLV 238 (266)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecc
Confidence 98888754
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=4.3e-08 Score=83.08 Aligned_cols=188 Identities=12% Similarity=0.081 Sum_probs=118.1
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC---CcccceeEEEEecCCCcEEEEEeC------CCeEE
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN---IHSCIVNNIRFNPTNDGTVYAASS------DGTVS 90 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~------dg~v~ 90 (396)
...|.+++|+|+| +++++. .+ .|.+||..++........ .....+..++++|+ +.++++... .+.|.
T Consensus 89 ~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~ 164 (326)
T 2ghs_A 89 PFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIY 164 (326)
T ss_dssp SSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEE
T ss_pred CCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEE
Confidence 4679999999998 555544 44 499999877664433221 11346899999998 776665432 24555
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCC--CC-CCCc-cce-eeecCCccE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDAR--TN-SRSG-EAI-LIHRKGSKV 164 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~--~~-~~~~-~~~-~~~~~~~~i 164 (396)
.++ +++...... .. .....++|+|+++.++.+ +.++.|.+|++. ++ .... ... .........
T Consensus 165 ~~~--~g~~~~~~~-~~---------~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p 232 (326)
T 2ghs_A 165 HVA--KGKVTKLFA-DI---------SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM 232 (326)
T ss_dssp EEE--TTEEEEEEE-EE---------SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEE
T ss_pred EEe--CCcEEEeeC-CC---------cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCC
Confidence 555 444322211 00 126789999999877655 456899999986 44 2211 111 111123457
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEc-CCCCEEEEEeCC
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFS-PSGSKILTTSQD 227 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d 227 (396)
..+++.+ +++++++...++.|.+||.. .+....+. .....+.+++|+ +++..|++++..
T Consensus 233 ~gi~~d~-~G~lwva~~~~~~v~~~d~~-g~~~~~i~--~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 233 DGSVCDA-EGHIWNARWGEGAVDRYDTD-GNHIARYE--VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEECT-TSCEEEEEETTTEEEEECTT-CCEEEEEE--CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CeeEECC-CCCEEEEEeCCCEEEEECCC-CCEEEEEE--CCCCCcEEEEEecCCCCEEEEEecC
Confidence 7899998 88887777677889999973 33222222 234568999998 888877665543
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=9.2e-12 Score=107.53 Aligned_cols=183 Identities=11% Similarity=0.074 Sum_probs=102.7
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGP 113 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 113 (396)
..+++++.||.|+.||..+++....+.. ..+.+..+..+ +..+++++.|+.|+.||..+|+.+..+......
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~---- 81 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE---- 81 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH----
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeeeeeccCcc----
Confidence 4688999999999999999988877742 45555555566 667888889999999999998876555322110
Q ss_pred Ccceeee-EEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecC
Q 016032 114 RTWRMLY-GMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192 (396)
Q Consensus 114 ~~~~~v~-~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 192 (396)
.+. +..+ ..+..+++++.++.++.||..+++....... +. ...++| .+..+++++.++.|+.||.+
T Consensus 82 ----~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 82 ----LVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSS---AF----ADSLSP-STSLLYLGRTEYTITMYDTK 148 (369)
T ss_dssp ----HHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSS
T ss_pred ----ccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecC---CC----cccccc-cCCEEEEEecCCEEEEEECC
Confidence 010 0011 1345677888899999999999876543311 11 234566 77888889999999999998
Q ss_pred CCCCCCccccCCCCCceeEEEEcCCC---CEEEEEeCCCcEEEEEccccccc
Q 016032 193 RLEAGSSLCDLPHKRVVNSAYFSPSG---SKILTTSQDNRLRIWDSIFGNLD 241 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~ 241 (396)
+++....+... .....+++++. ..+++++.+|.|..||..+|+.+
T Consensus 149 tG~~~W~~~~~----~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 149 TRELRWNATYF----DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp SSSCCCEEEEE----EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred CCCEEEeEecc----cccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 76543332211 11222333322 56777889999999999988753
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.14 E-value=2.5e-08 Score=85.66 Aligned_cols=198 Identities=11% Similarity=0.062 Sum_probs=128.5
Q ss_pred CCCCcEEEEEeCCCcEEEeecccc----eeeeEec------CCcccceeEEEEecCCCcEEEEEeCC------CeEEEEE
Q 016032 30 PTNNHILLSGDKKGQVGVWDFYKV----SEKIVYG------NIHSCIVNNIRFNPTNDGTVYAASSD------GTVSCTD 93 (396)
Q Consensus 30 ~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~------~~~~~~v~~~~~~~~~~~~l~s~~~d------g~v~iwd 93 (396)
++.++++++|..++.|.|+|+.+. +....+. +........+...|+ + +++++..+ |.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEEEEE
Confidence 777677788888999999999754 3333331 001124566778898 6 77776555 7899999
Q ss_pred CCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-------------------cCCeEEEEeCCCCCCCccc
Q 016032 94 LETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-------------------NFGFLYLVDARTNSRSGEA 154 (396)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------------------~~g~i~i~d~~~~~~~~~~ 154 (396)
..+.+.+..+....... ...+.+.|+|+++.+++.. ....|.+||+.+++....+
T Consensus 171 ~~T~~v~~~~~~~~~~~------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQ------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp TTTCCEEEECCSBCTTC------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEEccCCCCc------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 99999988886442210 1144577899999888874 3689999999986433322
Q ss_pred eeeecCCccEEEEEe--ccCCCCEEEEee------CCCcEEEEecCCCC-------------CCCccccC----C-CCCc
Q 016032 155 ILIHRKGSKVVGLHC--NPIQPELLLSCG------NDHFARIWDIRRLE-------------AGSSLCDL----P-HKRV 208 (396)
Q Consensus 155 ~~~~~~~~~i~~~~~--~~~~~~~l~~~~------~d~~i~~wd~~~~~-------------~~~~~~~~----~-~~~~ 208 (396)
.....+.....+.| +| ++.++++++ .+++|.+|....+. ....+... . ....
T Consensus 245 -~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 245 -TLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp -ESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred -ecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 22111223455655 99 887777666 46688765543211 00000000 0 0245
Q ss_pred eeEEEEcCCCCEEEEEeC-CCcEEEEEccc
Q 016032 209 VNSAYFSPSGSKILTTSQ-DNRLRIWDSIF 237 (396)
Q Consensus 209 i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~ 237 (396)
+..+.+||+|++|+++.. .+.|.+||+..
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 788999999999988775 68999999863
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=4e-09 Score=90.18 Aligned_cols=211 Identities=12% Similarity=0.096 Sum_probs=131.5
Q ss_pred cccCCeEEEEecCCCCcEEEEEeC-----CCcEEEeecccceeeeEecC-----CcccceeEEEEecCCCcEEEEEe---
Q 016032 18 YHSRRVTCLEFHPTNNHILLSGDK-----KGQVGVWDFYKVSEKIVYGN-----IHSCIVNNIRFNPTNDGTVYAAS--- 84 (396)
Q Consensus 18 ~h~~~v~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~--- 84 (396)
+|...+..+++++++ +++++... ++.|.+||+.+++....+.. .+...+..+++.|+++..+++-.
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 466789999999998 66665433 57899999988775544421 12345789999987344455555
Q ss_pred CCCeEEEEECCCCcccceeecCCCCC--------CCCC------------cceeeeEEEeCCCCCEEEEEecCC-eEEEE
Q 016032 85 SDGTVSCTDLETGLALSLMNVNPNGW--------HGPR------------TWRMLYGMDINPEKGVVLVADNFG-FLYLV 143 (396)
Q Consensus 85 ~dg~v~iwd~~~~~~~~~~~~~~~~~--------~~~~------------~~~~v~~~~~~~~~~~l~~~~~~g-~i~i~ 143 (396)
.++.|.+||+.+++....+..+.... .+.. ....+..++++|+++.|+++...+ .++.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 57899999998877654432210000 0000 002367899999999888887665 56555
Q ss_pred eCCC---CCCC----ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcC
Q 016032 144 DART---NSRS----GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSP 216 (396)
Q Consensus 144 d~~~---~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~ 216 (396)
+... .... ........+......+++++ +++++++...++.|.+||..+++. ..+........+.+++|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGS 300 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECT
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEECC
Confidence 5321 1100 00001111122456789999 899999998999999999843322 1121112245688999999
Q ss_pred CCCEEEEEeCCCcEE
Q 016032 217 SGSKILTTSQDNRLR 231 (396)
Q Consensus 217 ~~~~l~~~~~d~~i~ 231 (396)
++.++++.+..+.+.
T Consensus 301 ~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 301 DGYLYFDCNQLHHSA 315 (343)
T ss_dssp TSCEEEEECCGGGSG
T ss_pred CCcEEEEeCcccccc
Confidence 988877776544443
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.12 E-value=9.4e-09 Score=91.46 Aligned_cols=193 Identities=14% Similarity=0.115 Sum_probs=131.0
Q ss_pred CCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEE-e-cCCCcEEEEEe------------------CCCeE
Q 016032 30 PTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRF-N-PTNDGTVYAAS------------------SDGTV 89 (396)
Q Consensus 30 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~l~s~~------------------~dg~v 89 (396)
+||..++++...++.|.+.|+.+.+....+.......+..+++ . |+ +.++++++ .++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~-~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPR-SNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSB-CSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCC-CcEEEEecccccccCCCCcccccccccCceE
Confidence 3784445555556779999999988766443334456888888 4 88 78887774 34689
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC-------------------------------
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG------------------------------- 138 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g------------------------------- 138 (396)
.+.|..+.+....+..... ...++++|+|+++++++.+.
T Consensus 178 tvID~~t~~v~~qI~Vgg~----------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGN----------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp EEEETTTTEEEEEEEESSC----------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred EEEECCCCeEEEEEEeCCC----------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 9999999988888776442 45577889999888887543
Q ss_pred -------eEEEEeCCC--CCCCccceeeecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCC---------CCc
Q 016032 139 -------FLYLVDART--NSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEA---------GSS 199 (396)
Q Consensus 139 -------~i~i~d~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~---------~~~ 199 (396)
.|.+.|.++ +......+.. +....++.++| ++.++++++ .+.+|.++|+.+.+. ...
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~~~~~Ipv---g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSLFTRYIPI---ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCSSEEEEEE---ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CCeeEECcEEEEeCcccCCceeEEEEec---CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 366777776 3221111111 11456799999 888666554 688999999975321 011
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 200 LCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 200 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.....-......++|+|+|...++.-.|+.|.+||+.+
T Consensus 324 ~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 22223345678999999994445566799999999987
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.10 E-value=3.1e-09 Score=90.68 Aligned_cols=257 Identities=9% Similarity=-0.064 Sum_probs=153.2
Q ss_pred CCCccceeeeccccCCeEEEEecCCCCcEEEEEe----------CCCcEEEeecccceeeeEecCC--c----ccceeEE
Q 016032 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGD----------KKGQVGVWDFYKVSEKIVYGNI--H----SCIVNNI 70 (396)
Q Consensus 7 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~--~----~~~v~~~ 70 (396)
..+.+.+..+..-..+ .+.++|++.. |+++. .++.|.+||+.+.+....+..+ . ......+
T Consensus 53 ~~t~~v~~~i~vG~~P--~i~~spDg~~-lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~i 129 (368)
T 1mda_H 53 AGCGVTLGHSLGAFLS--LAVAGHSGSD-FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHII 129 (368)
T ss_dssp TTTTEEEEEEEECTTC--EEEECTTSSC-EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSE
T ss_pred CCCCeEEEEEeCCCCC--ceEECCCCCE-EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceE
Confidence 3445555666554555 7999999954 55553 3688999999998887776322 0 1346789
Q ss_pred EEecCCCcEEEEEeC--CCeEEE--EECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCC-CEEEEEecCCeEEEEeC
Q 016032 71 RFNPTNDGTVYAASS--DGTVSC--TDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEK-GVVLVADNFGFLYLVDA 145 (396)
Q Consensus 71 ~~~~~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~i~d~ 145 (396)
+++|+ +++++++.. +..|.+ +|+.+ +..+..... ..+.|++ ..+++.+.+|.+.+.|+
T Consensus 130 a~SpD-Gk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-------------~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 130 GNCAS-SACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-------------FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp EECTT-SSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-------------CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred EEcCC-CCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-------------eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 99999 888888764 467888 88877 344432110 1122333 34445566777777787
Q ss_pred CC-----CCCCccc-eeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCC--CCccccCC--------CCCce
Q 016032 146 RT-----NSRSGEA-ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA--GSSLCDLP--------HKRVV 209 (396)
Q Consensus 146 ~~-----~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~--------~~~~i 209 (396)
.. ++..... ....-...+. . .+ ++..++..+. +.|.+.|+..... ...+.... .....
T Consensus 193 ~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~-~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 193 AAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN-YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp CSSCCCCEECCCCSCTTSCBCSCCE---E-ET-TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred ccccccCCeEEEEeeeeeeCCCCcc---c-cc-cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 76 3222100 0011111233 3 55 4555555556 8999999864221 11111000 01112
Q ss_pred eEEEEcCCCCEEEEEeC---------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeee
Q 016032 210 NSAYFSPSGSKILTTSQ---------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYI 280 (396)
Q Consensus 210 ~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 280 (396)
..++++|+++.++++.. ++.+.++|+.+++.+..... ...+..+.|+|+ |+++
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v---------g~~p~gi~~s~D---------g~~l 328 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN---------GHDSDAIIAAQD---------GASD 328 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE---------EEEECEEEECCS---------SSCE
T ss_pred eeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC---------CCCcceEEECCC---------CCEE
Confidence 22689999998887643 23567999998876543221 112457888988 5432
Q ss_pred eeecccc-cccceEEEEcCccchhhhhcCC
Q 016032 281 SENYNGA-ALHPIDFIDITTGQLVAEVMDP 309 (396)
Q Consensus 281 ~~~~~g~-~d~~i~vwd~~~~~~~~~~~~~ 309 (396)
.. +.. .++.|.++|+.+++.+.++..+
T Consensus 329 ~v--a~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 329 NY--ANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EE--EEETTTTEEEEEESSSCEEEEECCCC
T ss_pred EE--EccCCCCeEEEEECCCCcEEEEEECC
Confidence 21 233 4789999999999999888654
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.08 E-value=2.1e-08 Score=85.20 Aligned_cols=268 Identities=11% Similarity=0.073 Sum_probs=149.1
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
+...+.++...+++ . |..++.+ +..+|. ++....... ..........+. +..++.++.++.|..+|.. ++
T Consensus 58 ~~~~~~~~~~~~~g-~-l~v~t~~--l~~~d~-~g~~~~~~~-~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~ 127 (330)
T 3hxj_A 58 GEIIECRPSIGKDG-T-IYFGSDK--VYAINP-DGTEKWRFD-TKKAIVSDFTIF---EDILYVTSMDGHLYAINTD-GT 127 (330)
T ss_dssp GGEEEECCEETTTT-E-ECCSSCE--EEEECC-CGGGGGGSC-C-----CCEEEE---TTEEEEECTTSEEEEECTT-SC
T ss_pred CCCcccceEEecCC-c-EEEecCc--EEEECC-CCcEEEEEE-CCCCcccCceEE---CCEEEEEecCCEEEEEcCC-CC
Confidence 34455677777776 3 4445544 888886 443333221 122222233333 3567778888999999988 76
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
.......... .+.++...+++. +++++.++.|..+|.. +...... ......+.++...+ ++.+++
T Consensus 128 ~~~~~~~~~~---------~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~---~~~~~~~~~~~~d~-~g~l~v 192 (330)
T 3hxj_A 128 EKWRFKTKKA---------IYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF---KTNDAITSAASIGK-DGTIYF 192 (330)
T ss_dssp EEEEEECSSC---------CCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEE---ECSSCCCSCCEECT-TCCEEE
T ss_pred EEEEEcCCCc---------eeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE---ecCCCceeeeEEcC-CCEEEE
Confidence 6555443222 145556666666 6667788999999988 5433221 12223455666665 666544
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCC
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT 258 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 258 (396)
++ +.|..+| .+++..... ......+.++...++|. |..++.++.|..+|. +++..... ......
T Consensus 193 -~t--~~l~~~d-~~g~~~~~~--~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~-------~~~~~~- 256 (330)
T 3hxj_A 193 -GS--DKVYAIN-PDGTEKWNF--YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRF-------KTGKRI- 256 (330)
T ss_dssp -ES--SSEEEEC-TTSCEEEEE--CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEE-------ECSSCC-
T ss_pred -Ee--CEEEEEC-CCCcEEEEE--ccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEe-------eCCCCc-
Confidence 44 7899999 443321111 12335577888888775 555667788888874 33321100 000000
Q ss_pred ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEE
Q 016032 259 PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIW 338 (396)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw 338 (396)
.......++ |.+.+ ++.++.|..+|. +++.+..+.... ..+.++ ...++|.+.+.+.+|.+++.
T Consensus 257 ~~~~~~~~~---------g~l~v----~t~~ggl~~~d~-~g~~~~~~~~~~-~~~~~~-~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 257 ESSPVIGNT---------DTIYF----GSYDGHLYAINP-DGTEKWNFETGS-WIIATP-VIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp CSCCEECTT---------SCEEE----ECTTCEEEEECT-TSCEEEEEECSS-CCCSCC-EECTTCCEEEECTTSCEEEE
T ss_pred cccceEcCC---------CeEEE----ecCCCCEEEECC-CCcEEEEEEcCC-ccccce-EEcCCCEEEEEcCCCeEEEE
Confidence 001112222 43333 566777999986 676665554432 445555 56688887665559999987
Q ss_pred cCCCc
Q 016032 339 RPKEK 343 (396)
Q Consensus 339 ~~~~~ 343 (396)
..+..
T Consensus 321 ~~~~~ 325 (330)
T 3hxj_A 321 FNLEH 325 (330)
T ss_dssp EC---
T ss_pred ecccc
Confidence 76543
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=5e-07 Score=74.15 Aligned_cols=251 Identities=10% Similarity=0.090 Sum_probs=143.6
Q ss_pred EEEEeCCCcEEEeecccceee----eEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCC
Q 016032 36 LLSGDKKGQVGVWDFYKVSEK----IVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWH 111 (396)
Q Consensus 36 l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 111 (396)
|+.+.. +.|+.+++...... ..........+..++|+++++.++++-...+.|..+++........+....
T Consensus 4 l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---- 78 (267)
T 1npe_A 4 LLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---- 78 (267)
T ss_dssp EEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC----
T ss_pred EEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC----
Confidence 444333 47888888764321 111111234678999999734555555667899999987654432221110
Q ss_pred CCCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeC---CCcEE
Q 016032 112 GPRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN---DHFAR 187 (396)
Q Consensus 112 ~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---d~~i~ 187 (396)
.....+++++++..++.+ ...+.|.++++..... .. ...........++++| ++..|+.+.. .+.|.
T Consensus 79 -----~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--~~-~~~~~~~~P~~i~vd~-~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 79 -----GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR--RV-LFDTGLVNPRGIVTDP-VRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp -----CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EE-EECSSCSSEEEEEEET-TTTEEEEEECCSSSCEEE
T ss_pred -----CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--EE-EEECCCCCccEEEEee-CCCEEEEEECCCCCcEEE
Confidence 127889999976655555 4567899999865321 11 1111223578999999 5554444433 46888
Q ss_pred EEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCC
Q 016032 188 IWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDP 266 (396)
Q Consensus 188 ~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (396)
.+++... ....+.. ........++++|++..|+.+. ..+.|.++|+....... .. .....|..++...
T Consensus 150 ~~~~dg~-~~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~----~~-----~~~~~P~gi~~d~ 218 (267)
T 1npe_A 150 TSHMDGT-NRRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK----VL-----EGLQYPFAVTSYG 218 (267)
T ss_dssp EEETTSC-CCEEEEC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE----EE-----ECCCSEEEEEEET
T ss_pred EEecCCC-CcEEEEE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE----Ee-----cCCCCceEEEEeC
Confidence 8887532 2122211 1234578999999877665554 56789999987543211 01 0111122222211
Q ss_pred CCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc
Q 016032 267 KDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD 325 (396)
Q Consensus 267 ~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 325 (396)
+.+.. +....+.|.++|..+++.+..+..........+ ++.|++.
T Consensus 219 ----------~~lyv---a~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi-~~~~~~~ 263 (267)
T 1npe_A 219 ----------KNLYY---TDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGI-TIALSQC 263 (267)
T ss_dssp ----------TEEEE---EETTTTEEEEEETTTTEEEEEECCSSCCCCCCE-EEECSCC
T ss_pred ----------CEEEE---EECCCCeEEEEeCCCCCceEEEcccccccccee-eecCccC
Confidence 22222 234457899999999988877754332335555 6777654
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=6.1e-11 Score=102.39 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=76.1
Q ss_pred CcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcccee
Q 016032 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAIL 156 (396)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~ 156 (396)
+..+++++.|+.|..||..+|+.+..+.. .. +.+..+..++..+++++.+|.|+.||..+++.......
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~----------~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DP----------VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CC----------SCCCC-----CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-CC----------ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 67899999999999999999999887765 11 33333445677778788999999999988765432211
Q ss_pred eecCCccEE-EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 157 IHRKGSKVV-GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 157 ~~~~~~~i~-~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
... ..+. ...+. .+..+++++.++.|+.||..+++....+.. + . ...++|++..+++++.++.|+.||.
T Consensus 78 -~~~-~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~--~-~---~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 78 -TIP-ELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSS--A-F---ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp -CHH-HHHTTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCS
T ss_pred -cCc-cccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecC--C-C---cccccccCCEEEEEecCCEEEEEEC
Confidence 100 0010 00111 345677788889999999987655333221 1 1 2345667788888888889999998
Q ss_pred ccccc
Q 016032 236 IFGNL 240 (396)
Q Consensus 236 ~~~~~ 240 (396)
++|+.
T Consensus 148 ~tG~~ 152 (369)
T 2hz6_A 148 KTREL 152 (369)
T ss_dssp SSSSC
T ss_pred CCCCE
Confidence 87765
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=4.6e-08 Score=77.88 Aligned_cols=187 Identities=11% Similarity=0.064 Sum_probs=126.5
Q ss_pred ccCC--eEEEEecCCCCcEEEEEeCCC--cEEEeecccceeeeEecCCccccee--EEEEecCCCcEEEEEeCCCeEEEE
Q 016032 19 HSRR--VTCLEFHPTNNHILLSGDKKG--QVGVWDFYKVSEKIVYGNIHSCIVN--NIRFNPTNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 19 h~~~--v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~dg~v~iw 92 (396)
|... ...|.|+ ++ .++.+.+.+| .|+++|+.+++....+.. ..... .+++.. +...+..-.++.+.++
T Consensus 39 hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g--~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 39 HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWK--DKIVGLTWKNGLGFVW 112 (262)
T ss_dssp CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEET--TEEEEEESSSSEEEEE
T ss_pred CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeC--CEEEEEEeeCCEEEEE
Confidence 5443 4788998 55 7777877776 899999999987777642 22333 344432 3444445568999999
Q ss_pred ECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC---ccEEEEEe
Q 016032 93 DLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG---SKVVGLHC 169 (396)
Q Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~---~~i~~~~~ 169 (396)
|..+.+.+..+.....+ .. +++++..|+.+..++.|.++|..+.+......... .+ ..++.+.|
T Consensus 113 D~~t~~~~~ti~~~~eG----------~g--lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g~~~~~lNELe~ 179 (262)
T 3nol_A 113 NIRNLRQVRSFNYDGEG----------WG--LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HGEELPELNELEW 179 (262)
T ss_dssp ETTTCCEEEEEECSSCC----------CC--EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE-TTEECCCEEEEEE
T ss_pred ECccCcEEEEEECCCCc----------eE--EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CCccccccceeEE
Confidence 99999999988765432 22 33567777777778899999999877665443321 11 23556777
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC----------CCCCceeEEEEcCCCCEEEEEeC
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL----------PHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
. ++.+++....+..|.+.|.++++....+... ......+.|+|+|+++.|++.+.
T Consensus 180 ~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 180 V--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp E--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred E--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6 5677766667889999999876654333221 11235689999998887776664
No 242
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.04 E-value=5.7e-07 Score=72.11 Aligned_cols=214 Identities=10% Similarity=0.026 Sum_probs=135.2
Q ss_pred eeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 15 VIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 15 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
.+.+-.+.+..++|+|+++.++++...++.|...|.. +.....+..+-....-.|++.++ +.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~-g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGD-NQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECST-TEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCC-CEEEEEECCCCcEEEEEc
Confidence 5667677899999999876777778888999999988 55555543222356788888887 666677667788999988
Q ss_pred CCCccc---ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCC--CCCCccceee-----ecCCccE
Q 016032 95 ETGLAL---SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDART--NSRSGEAILI-----HRKGSKV 164 (396)
Q Consensus 95 ~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~--~~~~~~~~~~-----~~~~~~i 164 (396)
.....+ .....+. ...........++|+|.++.|+++.......+|.... .......... ...-..+
T Consensus 99 ~~~~~i~~~~~~~~~~---~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPL---QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp CTTCCEEEEEEEECCC---SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred CCCCeeeeeeeecccc---ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 765432 2222111 0111123378999999998888887766555555431 0000111100 0112246
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-C------CCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-P------HKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~------~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
.+++++|..+.+++.......|..+|... +....+... + .-.....|+|.++|++.++ +.-+.++.|.-
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 89999997777788887888899998753 221222111 1 1136789999999985554 66666666543
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.02 E-value=7.2e-07 Score=73.20 Aligned_cols=202 Identities=11% Similarity=0.051 Sum_probs=126.4
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
..+..++|+|++..++++-...+.|..++..+....... .........+++.|+++..+++-...+.|.++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 456789999976566777767889999999765443333 2223567899999973455555566789999998754322
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec---CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC-E
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN---FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE-L 176 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~ 176 (396)
...... ......++++|++..|+.+.. .+.|..+++..... .. ...........++++| ++. +
T Consensus 115 ~~~~~~---------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~~-~~~~~~~~P~gia~d~-~~~~l 181 (267)
T 1npe_A 115 VLFDTG---------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RI-LAQDNLGLPNGLTFDA-FSSQL 181 (267)
T ss_dssp EEECSS---------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EE-EECTTCSCEEEEEEET-TTTEE
T ss_pred EEEECC---------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--EE-EEECCCCCCcEEEEcC-CCCEE
Confidence 221111 012688999997666666554 36888888764221 11 1112223578999999 654 5
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccccccc
Q 016032 177 LLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLD 241 (396)
Q Consensus 177 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~ 241 (396)
+++-...+.|..+|+........+. .......++.. +..|+.+. ..+.|..+|..+++..
T Consensus 182 yv~d~~~~~I~~~~~~g~~~~~~~~---~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 182 CWVDAGTHRAECLNPAQPGRRKVLE---GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEETTTTEEEEEETTEEEEEEEEE---CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEECCCCEEEEEecCCCceEEEec---CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCce
Confidence 5555567899999986432211111 12234566664 44555444 5689999999887653
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.01 E-value=9.3e-09 Score=87.40 Aligned_cols=270 Identities=11% Similarity=0.067 Sum_probs=151.8
Q ss_pred EEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccccee
Q 016032 24 TCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLM 103 (396)
Q Consensus 24 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 103 (396)
.+.....++ . |..++.++.|..|| .+++..... ..+...+.++...++ + .++.++.+ |..+|. +++....+
T Consensus 23 ~~~~~d~~g-~-l~v~t~~~~l~~~d-~~g~~~~~~-~~~~~~~~~~~~~~~-g-~l~v~t~~--l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 23 SSPILAKNG-T-IYLGSSNKNLYAIN-TDGSVKWFF-KSGEIIECRPSIGKD-G-TIYFGSDK--VYAINP-DGTEKWRF 93 (330)
T ss_dssp CCCEECTTS-C-EECSSTTTTTEEEC-TTSCEEESS-CGGGEEEECCEETTT-T-EECCSSCE--EEEECC-CGGGGGGS
T ss_pred cCceEccCC-e-EEEEcCCCEEEEEC-CCCcEEEEE-ecCCCcccceEEecC-C-cEEEecCc--EEEECC-CCcEEEEE
Confidence 445555666 3 67777888999999 776655443 234445567777665 4 45555544 888886 66665544
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND 183 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 183 (396)
...... .....+. +..+.+++.++.|..+|.. +..... .......+.++...+ ++. +..++.+
T Consensus 94 ~~~~~~---------~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~---~~~~~~~~~~~~~~~-~g~-l~vgt~~ 156 (330)
T 3hxj_A 94 DTKKAI---------VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWR---FKTKKAIYATPIVSE-DGT-IYVGSND 156 (330)
T ss_dssp CC--------------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEE---EECSSCCCSCCEECT-TSC-EEEECTT
T ss_pred ECCCCc---------ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEE---EcCCCceeeeeEEcC-CCE-EEEEcCC
Confidence 332211 1122222 5668888889999999988 543322 122222345556665 555 6667778
Q ss_pred CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEE
Q 016032 184 HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAE 263 (396)
Q Consensus 184 ~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
+.|..+|.. ++...... .....+.++...+++.+++ ++ +.|..|| .+++..... ... ......+.
T Consensus 157 ~~l~~~d~~-g~~~~~~~--~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~-------~~~-~~~~~~~~ 221 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFK--TNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNF-------YAG-YWTVTRPA 221 (330)
T ss_dssp SEEEEECTT-SCEEEEEE--CSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEE-------CCS-SCCCSCCE
T ss_pred CEEEEECCC-CCEeEEEe--cCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEE-------ccC-CcceeceE
Confidence 999999986 33222221 2334566777777777554 44 7899999 555432110 000 00111223
Q ss_pred eCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCCc
Q 016032 264 WDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEK 343 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~ 343 (396)
.+++ |.+.+ ++.++.|..++. +++.+..+.... .....+ .+.+++.+.+...+|.|..++. ++
T Consensus 222 ~~~~---------g~l~v----~t~~~gl~~~~~-~g~~~~~~~~~~-~~~~~~-~~~~~g~l~v~t~~ggl~~~d~-~g 284 (330)
T 3hxj_A 222 ISED---------GTIYV----TSLDGHLYAINP-DGTEKWRFKTGK-RIESSP-VIGNTDTIYFGSYDGHLYAINP-DG 284 (330)
T ss_dssp ECTT---------SCEEE----EETTTEEEEECT-TSCEEEEEECSS-CCCSCC-EECTTSCEEEECTTCEEEEECT-TS
T ss_pred ECCC---------CeEEE----EcCCCeEEEECC-CCCEeEEeeCCC-Cccccc-eEcCCCeEEEecCCCCEEEECC-CC
Confidence 3332 33333 455666778874 555555444332 223333 4666776555444889999996 67
Q ss_pred ceeeeccc
Q 016032 344 SELVEQKE 351 (396)
Q Consensus 344 ~~~~~~~~ 351 (396)
+.+..+..
T Consensus 285 ~~~~~~~~ 292 (330)
T 3hxj_A 285 TEKWNFET 292 (330)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEc
Confidence 76655543
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=1.1e-07 Score=86.76 Aligned_cols=268 Identities=11% Similarity=-0.016 Sum_probs=149.7
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCc-c--cceeE-EEEecCCCcEEEEEeC------CCeEEEEECCCCcccceee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIH-S--CIVNN-IRFNPTNDGTVYAASS------DGTVSCTDLETGLALSLMN 104 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~--~~v~~-~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~ 104 (396)
.++.++.|+.+..+|..+++.+....... . ..+.+ .... +..++.++. ++.|..+|..+|+.+..+.
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA---KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE---TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE---CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 47777789999999999988877653211 1 01211 1111 345555554 7899999999999887765
Q ss_pred cCCCCCC---CC--------------------------CcceeeeEEEeCCCCCEEEEEecC----------------Ce
Q 016032 105 VNPNGWH---GP--------------------------RTWRMLYGMDINPEKGVVLVADNF----------------GF 139 (396)
Q Consensus 105 ~~~~~~~---~~--------------------------~~~~~v~~~~~~~~~~~l~~~~~~----------------g~ 139 (396)
....... .+ ........+++.++...++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 4322100 00 000001235566766777776542 35
Q ss_pred EEEEeCCCCCCCccceeee-------cCCccEEEEEeccCCC---CEEEEeeCCCcEEEEecCCCCCCCccccCC-----
Q 016032 140 LYLVDARTNSRSGEAILIH-------RKGSKVVGLHCNPIQP---ELLLSCGNDHFARIWDIRRLEAGSSLCDLP----- 204 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----- 204 (396)
|..+|..+++......... ....++. +...+ ++ ..++.++.+|.++++|..+++.......-.
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 8999999887654332111 0111222 22223 45 357778889999999987765422211100
Q ss_pred ------CCCce--------------------------eEEEEcCCCCEEEEEeC--------------------------
Q 016032 205 ------HKRVV--------------------------NSAYFSPSGSKILTTSQ-------------------------- 226 (396)
Q Consensus 205 ------~~~~i--------------------------~~~~~~~~~~~l~~~~~-------------------------- 226 (396)
...++ ..++++|+..+|++.+.
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 00111 24678888777777653
Q ss_pred -----------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEE
Q 016032 227 -----------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFI 295 (396)
Q Consensus 227 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vw 295 (396)
+|.|..||+.+++..-... .........+...+..+. .++.++.|+.|
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~------------------~~~~~~~~~~~t~gg~v~---~g~~dg~l~a~ 490 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKW------------------EKFAAWGGTLYTKGGLVW---YATLDGYLKAL 490 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEE------------------ESSCCCSBCEEETTTEEE---EECTTSEEEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEec------------------CCCCccceeEEECCCEEE---EEcCCCeEEEE
Confidence 3566666666665421100 000000112222244444 47889999999
Q ss_pred EcCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 296 DITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 296 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
|..+|+.+.++..........+ .+..+|+.++.
T Consensus 491 D~~tG~~lw~~~~~~~~~~~p~-~~~~~G~~yv~ 523 (571)
T 2ad6_A 491 DNKDGKELWNFKMPSGGIGSPM-TYSFKGKQYIG 523 (571)
T ss_dssp ETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEE
T ss_pred ECCCCCEEEEEeCCCCcEeeeE-EEEECCEEEEE
Confidence 9999999988876542223333 46678876555
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.97 E-value=1.4e-07 Score=75.06 Aligned_cols=183 Identities=12% Similarity=0.099 Sum_probs=124.7
Q ss_pred eEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccce
Q 016032 23 VTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSL 102 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 102 (396)
...|.|+. + .++.+.+.+|.|+++|+.+++....+ ......-..+++.. +...+..-.++.+.+||..+.+.+..
T Consensus 57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 46888874 3 78888889999999999998877665 22221123355543 45555556789999999999999998
Q ss_pred eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC---ccEEEEEeccCCCCEEEE
Q 016032 103 MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG---SKVVGLHCNPIQPELLLS 179 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~l~~ 179 (396)
+.....+ ..++ +++..|+.+..++.|.++|..+.+....+.... .+ ..++.+.|. ++.+++.
T Consensus 132 i~~~~eG----------wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNeLe~~--dG~lyan 196 (268)
T 3nok_A 132 TRYSGEG----------WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-RGQPVELINELECA--NGVIYAN 196 (268)
T ss_dssp EECSSCC----------CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEE--TTEEEEE
T ss_pred EeCCCce----------eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-CCcccccccccEEe--CCEEEEE
Confidence 8765332 2233 568888888889999999999977655432222 21 135677776 5666666
Q ss_pred eeCCCcEEEEecCCCCCCCccccC-----------CCCCceeEEEEcCCCCEEEEEe
Q 016032 180 CGNDHFARIWDIRRLEAGSSLCDL-----------PHKRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 180 ~~~d~~i~~wd~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~ 225 (396)
...+..|.+.|.++++....+..- ......+.|+|+|+++.|++.+
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 667889999999876543333211 1224678999999766655544
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.96 E-value=3.5e-07 Score=83.41 Aligned_cols=304 Identities=14% Similarity=0.091 Sum_probs=166.3
Q ss_pred EEEEEeC-CCcEEEeec-ccceeeeEecCCcccc----------eeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccce
Q 016032 35 ILLSGDK-KGQVGVWDF-YKVSEKIVYGNIHSCI----------VNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSL 102 (396)
Q Consensus 35 ~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 102 (396)
.++.++. ++.|.-+|. .+++.+.......... -..++.. +..++.++.|+.|..+|..+|+.+..
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE---CCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 3555666 889999999 8888877764221111 0123332 56788888899999999999998877
Q ss_pred eecCCCCCCCCCcceeee-EEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeecC---------------
Q 016032 103 MNVNPNGWHGPRTWRMLY-GMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHRK--------------- 160 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~~--------------- 160 (396)
........ ... +. +... .+..+++++. ++.|+.+|..+++...+.......
T Consensus 141 ~~~~~~~~-~~~----~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 213 (571)
T 2ad6_A 141 VEVCDPKV-GST----LTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPH 213 (571)
T ss_dssp EECCCGGG-TCB----CCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred ecCCCCCc-cce----eccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccc
Confidence 66432110 000 11 0011 2345666654 789999999988765432211000
Q ss_pred -------------------Cc-cEEEEEeccCCCCEEEEeeCC----------------CcEEEEecCCCCCCCccccCC
Q 016032 161 -------------------GS-KVVGLHCNPIQPELLLSCGND----------------HFARIWDIRRLEAGSSLCDLP 204 (396)
Q Consensus 161 -------------------~~-~i~~~~~~~~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~~~~~ 204 (396)
+. ....+++.+ ....++.++.+ +.|..+|.++++..-..+...
T Consensus 214 ~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~ 292 (571)
T 2ad6_A 214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP 292 (571)
T ss_dssp GCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST
T ss_pred ccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC
Confidence 00 001345556 44555555432 358889988766533332222
Q ss_pred C--------CCceeEEEEcCCCC---EEEEEeCCCcEEEEEcccccccCCCcce----------------eec-------
Q 016032 205 H--------KRVVNSAYFSPSGS---KILTTSQDNRLRIWDSIFGNLDSPSREI----------------VHS------- 250 (396)
Q Consensus 205 ~--------~~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~------- 250 (396)
| ..++ -+...++|+ .++.++.+|.+.++|..+|+.+...... ...
T Consensus 293 ~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~ 371 (571)
T 2ad6_A 293 HDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRM 371 (571)
T ss_dssp TCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCT
T ss_pred CcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCC
Confidence 2 1222 122234674 5778889999999999999864321100 000
Q ss_pred --------ccccccCCceeEEeCCCCCCCceeeE---------------ee-ee------eeeccc---ccccceEEEEc
Q 016032 251 --------HDFNRHLTPFRAEWDPKDPSESLAVI---------------GR-YI------SENYNG---AALHPIDFIDI 297 (396)
Q Consensus 251 --------~~~~~~~~~~~~~~~~~~~~~~~~~~---------------g~-~~------~~~~~g---~~d~~i~vwd~ 297 (396)
....+...-..++++|+.....+... |. |+ .....+ ..++.|..||+
T Consensus 372 ~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~ 451 (571)
T 2ad6_A 372 DHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDL 451 (571)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECT
T ss_pred CCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEEC
Confidence 00000000012344544321111110 00 00 000001 24688999999
Q ss_pred CccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccc
Q 016032 298 TTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
.+|+.+.++.... .+... .+...+.+++.++ |+.|+.||..+|+++.+++...
T Consensus 452 ~tG~~~W~~~~~~--~~~~~-~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 452 TTGKAKWTKWEKF--AAWGG-TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp TTCCEEEEEEESS--CCCSB-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCEEEEecCCC--Cccce-eEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 9999887765432 22222 2334455666677 9999999999999998876543
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=1.1e-07 Score=88.53 Aligned_cols=269 Identities=14% Similarity=0.091 Sum_probs=154.8
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCcc---cceeE-EEEecCCCcEEEEEeC------CCeEEEEECCCCcccceee
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHS---CIVNN-IRFNPTNDGTVYAASS------DGTVSCTDLETGLALSLMN 104 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~-~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~ 104 (396)
.++.++.|+.|..+|..+++.+........ ..+.+ ..+. +..++.+.. +|.|..+|..+|+.+..+.
T Consensus 119 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~---~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV---KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE---CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 477788899999999999988877643211 11111 1111 334555432 5899999999999988776
Q ss_pred cCCC-CCCCC---------------------CcceeeeEEEeCCCCCEEEEEecCC-------------------eEEEE
Q 016032 105 VNPN-GWHGP---------------------RTWRMLYGMDINPEKGVVLVADNFG-------------------FLYLV 143 (396)
Q Consensus 105 ~~~~-~~~~~---------------------~~~~~v~~~~~~~~~~~l~~~~~~g-------------------~i~i~ 143 (396)
.... ..... ........+++.++...++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 4321 10000 0000123467888888888887766 39999
Q ss_pred eCCCCCCCccceeeec------CCccEEEEEeccCCCC---EEEEeeCCCcEEEEecCCCCCCCccccCC----------
Q 016032 144 DARTNSRSGEAILIHR------KGSKVVGLHCNPIQPE---LLLSCGNDHFARIWDIRRLEAGSSLCDLP---------- 204 (396)
Q Consensus 144 d~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~~~~~~---------- 204 (396)
|..+++........+. ...+.....+.. ++. .++.++.+|.++++|..+++.........
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 9999876654322110 011222222222 444 68889999999999988765431110000
Q ss_pred CCC------------------------ceeEEEEcCCCCEEEEEe-----------------------------------
Q 016032 205 HKR------------------------VVNSAYFSPSGSKILTTS----------------------------------- 225 (396)
Q Consensus 205 ~~~------------------------~i~~~~~~~~~~~l~~~~----------------------------------- 225 (396)
... .-..++++|+..++++..
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 000 011267888766665432
Q ss_pred -CCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhh
Q 016032 226 -QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA 304 (396)
Q Consensus 226 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~ 304 (396)
.+|.|..||+.+++..-... .. .+ .....+...|.+++ .|+.++.+++||..+|+.+.
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~-----~~------------~~-~~~~~~~t~gg~vf---~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVP-----YP------------TH-WNGGTLSTAGNLVF---QGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEE-----ES------------SS-CCCCEEEETTTEEE---EECTTSEEEEEETTTCCEEE
T ss_pred CccceEEEEeCCCCcEEEEcc-----CC------------CC-CcCceeEeCCCEEE---EECCcccchhhhhhcChhhe
Confidence 23667777777766422110 00 00 00123333455555 57889999999999999998
Q ss_pred hhcCCCCCCCcceeeeccCCc-EEEe
Q 016032 305 EVMDPNITTISPVNKLHPRDD-VLAS 329 (396)
Q Consensus 305 ~~~~~~~~~i~~~~~~~~~~~-~l~s 329 (396)
.+..+.......+ .+..+|+ +++.
T Consensus 494 ~~~~~~~~~~~p~-~~~~~G~~yva~ 518 (668)
T 1kv9_A 494 QFEAQSGIVAAPM-TFELAGRQYVAI 518 (668)
T ss_dssp EEECSSCCCSCCE-EEEETTEEEEEE
T ss_pred EecCCCCcccCce-EEEECCEEEEEE
Confidence 8876542222344 5667776 4444
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.93 E-value=4.2e-07 Score=82.92 Aligned_cols=305 Identities=14% Similarity=0.072 Sum_probs=169.6
Q ss_pred EEEEEeC-CCcEEEeec-ccceeeeEecCCccc----------ceeEEEEecCCCcE----EEEEeCCCeEEEEECCCCc
Q 016032 35 ILLSGDK-KGQVGVWDF-YKVSEKIVYGNIHSC----------IVNNIRFNPTNDGT----VYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 35 ~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~----l~s~~~dg~v~iwd~~~~~ 98 (396)
.|+.++. ++.|.-+|. .+++.+......... ....+++.|. +.. ++.++.|+.|..+|..+|+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~-~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPG-DGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECC-CSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEec-CCcceeEEEEEcCCCEEEEEECCCCC
Confidence 3556666 889999999 888887776422111 0123455444 444 8888899999999999999
Q ss_pred ccceeecCCCCCCCCCcceeeeE-EEeCCCCCEEEEEe------cCCeEEEEeCCCCCCCccceeeecC-----------
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYG-MDINPEKGVVLVAD------NFGFLYLVDARTNSRSGEAILIHRK----------- 160 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~------~~g~i~i~d~~~~~~~~~~~~~~~~----------- 160 (396)
.+......... .... +.+ -.+ .+..+++++ .+|.|+.+|..+++...+.......
T Consensus 143 ~~W~~~~~~~~-~~~~----~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~ 215 (599)
T 1w6s_A 143 TVWKVENSDIK-VGST----LTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNI 215 (599)
T ss_dssp EEEEEECCCGG-GTCB----CCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred EEEeecCCCCC-ccce----eecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 88776543211 0000 110 011 133555554 3789999999988765432211100
Q ss_pred -----------------------Ccc-EEEEEeccCCCCEEEEeeCC----------------CcEEEEecCCCCCCCcc
Q 016032 161 -----------------------GSK-VVGLHCNPIQPELLLSCGND----------------HFARIWDIRRLEAGSSL 200 (396)
Q Consensus 161 -----------------------~~~-i~~~~~~~~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~ 200 (396)
+.. -..+++.+ ...+++.++.+ +.|..+|.++++..-..
T Consensus 216 ~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 216 KNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp TCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred ccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 000 01345556 55666666554 37888998876654333
Q ss_pred ccCCCC--------CceeEEEEc-CCC---CEEEEEeCCCcEEEEEcccccccCCCccee--------e-cc--------
Q 016032 201 CDLPHK--------RVVNSAYFS-PSG---SKILTTSQDNRLRIWDSIFGNLDSPSREIV--------H-SH-------- 251 (396)
Q Consensus 201 ~~~~~~--------~~i~~~~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------~-~~-------- 251 (396)
+...|. .++. +... .+| ..++.++.+|.+.++|.++|+.+....... . ..
T Consensus 295 q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~ 373 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPE 373 (599)
T ss_dssp ESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGG
T ss_pred ecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccc
Confidence 332221 1221 2222 467 467778899999999999998753221000 0 00
Q ss_pred --------------cccccCCceeEEeCCCCCCCceeeE---------------------eee-eeeecccc------cc
Q 016032 252 --------------DFNRHLTPFRAEWDPKDPSESLAVI---------------------GRY-ISENYNGA------AL 289 (396)
Q Consensus 252 --------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------g~~-~~~~~~g~------~d 289 (396)
...+...--.++++|+.....+... +.+ +.. ...+ ..
T Consensus 374 ~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~-~p~~~~~~~~~~ 452 (599)
T 1w6s_A 374 YGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP-GPKGDRQNYEGL 452 (599)
T ss_dssp GCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE-CTTSBTTTTBCC
T ss_pred cCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc-CCcCCcccCCCc
Confidence 0000000012344554321111100 000 000 0011 45
Q ss_pred cceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccc
Q 016032 290 HPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEM 353 (396)
Q Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~ 353 (396)
+.|..||+.+|+.+-+..... ..... .+...+.+++.++ |+.|+.||..+|+++.+++...
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~-~~~~g--~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF-AVWGG--TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS-CCCSB--CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CeEEEEECCCCCEEeEecCCC-CccCc--ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 889999999999877664322 11212 2334566677788 9999999999999998876543
No 250
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.93 E-value=1.9e-06 Score=78.76 Aligned_cols=307 Identities=11% Similarity=0.051 Sum_probs=166.9
Q ss_pred EEEEeCCCcEEEeecccceeeeEecCCcccc--------eeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCC
Q 016032 36 LLSGDKKGQVGVWDFYKVSEKIVYGNIHSCI--------VNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP 107 (396)
Q Consensus 36 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 107 (396)
++.++.++.|.-+|..+++.+..+....... -..+++. +..++.++.++.|..+|..+|+.+.......
T Consensus 71 vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~---~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~ 147 (582)
T 1flg_A 71 IYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY---GDKVFFGTLDASVVALNKNTGKVVWKKKFAD 147 (582)
T ss_dssp EEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE---TTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred EEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE---CCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence 4445553449999999988877664211110 0122332 5678888889999999999999987766543
Q ss_pred CCCCCCCcceeeeEEEeC-CCCC-EEEEEec------CCeEEEEeCCCCCCCccceeeec--------------------
Q 016032 108 NGWHGPRTWRMLYGMDIN-PEKG-VVLVADN------FGFLYLVDARTNSRSGEAILIHR-------------------- 159 (396)
Q Consensus 108 ~~~~~~~~~~~v~~~~~~-~~~~-~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~-------------------- 159 (396)
... ...... -..+.-. .+++ .+++++. ++.|+-+|..+++..........
T Consensus 148 ~~~-~~~~~~-sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 148 HGA-GYTMTG-APTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp GGG-TCBCCS-CCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCc-Cccccc-CCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 110 000000 0011111 1233 5666543 78999999998876543211000
Q ss_pred ------------------CCccEEEEEeccCCCCEEEEeeC--------------------C----CcEEEEecCCCCCC
Q 016032 160 ------------------KGSKVVGLHCNPIQPELLLSCGN--------------------D----HFARIWDIRRLEAG 197 (396)
Q Consensus 160 ------------------~~~~i~~~~~~~~~~~~l~~~~~--------------------d----~~i~~wd~~~~~~~ 197 (396)
....-..+++.| ...+++.+.. | +.|..+|..+++..
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred CCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 000011345566 5556665542 2 57999999876654
Q ss_pred CccccCCCC--------CceeEEEEc-CCCC---EEEEEeCCCcEEEEEcccccccCCCccee----------------e
Q 016032 198 SSLCDLPHK--------RVVNSAYFS-PSGS---KILTTSQDNRLRIWDSIFGNLDSPSREIV----------------H 249 (396)
Q Consensus 198 ~~~~~~~~~--------~~i~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----------------~ 249 (396)
-..+...|. .++. +... .+|+ .++.++.+|.++++|..+|+.+....... .
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 433322221 1221 2222 4674 78889999999999999998753211100 0
Q ss_pred ccccc---------------------ccCCceeEEeCCCCCCCceeeEeeeeeee-------------c----------c
Q 016032 250 SHDFN---------------------RHLTPFRAEWDPKDPSESLAVIGRYISEN-------------Y----------N 285 (396)
Q Consensus 250 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------------~----------~ 285 (396)
...+. +...--.++++|......+.. +.+... + .
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~--~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~ 461 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA--NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMY 461 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE--ECEEEEEEECCCCCCTTSCCCCEEEEEEESC
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec--hhcceeeecccccccCCCceeccceeecCCC
Confidence 00000 000001234555432221111 100000 0 0
Q ss_pred cccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccce
Q 016032 286 GAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMK 354 (396)
Q Consensus 286 g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~ 354 (396)
...++.|..||+.+|+.+-+..... ....- .....+.+++.|+ |+.|+.||..+|+++.+++....
T Consensus 462 ~~~~G~l~A~D~~tG~~~W~~~~~~--~~~~g-~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 462 DDHVGSLRAMDPVSGKVVWEHKEHL--PLWAG-VLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp SSCSEEEEEECTTTCCEEEEEEESS--CCCSC-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCcceEEEEECCCCCEEEEecCCC--CCccc-ceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 1246889999999999887665432 12211 2333466777788 99999999999999988876544
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.93 E-value=3.8e-07 Score=72.00 Aligned_cols=194 Identities=14% Similarity=0.052 Sum_probs=127.3
Q ss_pred eeeeccccC--CeEEEEecCCCCcEEEEEeCCC--cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCe
Q 016032 13 CAVIRYHSR--RVTCLEFHPTNNHILLSGDKKG--QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGT 88 (396)
Q Consensus 13 ~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 88 (396)
+..+ .|.. -...+.|++ + .++.+.+.+| .|+.+|+.+++......-.....-..+++.. +......-.++.
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--~~ly~ltw~~~~ 86 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--DRLIQLTWRNHE 86 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEESSSSE
T ss_pred EEEc-CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--CEEEEEEeeCCE
Confidence 3344 3543 466899987 4 6777777754 8999999999877766422221123344442 455555567899
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC---ccEE
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG---SKVV 165 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~---~~i~ 165 (396)
+.++|..+.+.+..+.....+ ..++ +++..|+.+..++.|.++|..+.+......... ++ ..++
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G----------wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lN 153 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG----------WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLN 153 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC----------CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEE
T ss_pred EEEEECCcCcEEEEEeCCCCc----------eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCcccccce
Confidence 999999999999988765332 2333 467777777889999999999977654432221 11 2456
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC-----------CCCCceeEEEEcCCCCEEEEEeC
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL-----------PHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
.+.+. ++.+++....+..|.+.|.++++....+..- ......+.|+++|+++.|++.+.
T Consensus 154 eLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 154 ELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 77766 5666666667789999998876543332211 12245689999997777666553
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=4.2e-06 Score=70.71 Aligned_cols=194 Identities=15% Similarity=0.117 Sum_probs=114.4
Q ss_pred eccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCC------------------cccceeEEEEecCCC
Q 016032 16 IRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI------------------HSCIVNNIRFNPTND 77 (396)
Q Consensus 16 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~ 77 (396)
+.+.-....+++|.+++ +++.++..++.|..|+..+.......... ....+..+++.++ .
T Consensus 14 ~~g~~~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~-~ 91 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ-N 91 (322)
T ss_dssp EECSSSCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT-T
T ss_pred cCCccCCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC-C
Confidence 34433456789999998 66788888899999998765432211100 1135788999984 3
Q ss_pred cEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEec-----------------CCe
Q 016032 78 GTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADN-----------------FGF 139 (396)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-----------------~g~ 139 (396)
..|+.+...+.|..+|..++......... .. ........+++.+ +|+..++-.. .+.
T Consensus 92 g~l~v~d~~~~i~~~d~~~g~~~~~~~~~-~~----~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 92 NQLYIVDCYYHLSVVGSEGGHATQLATSV-DG----VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TEEEEEETTTEEEEECTTCEECEEEESEE-TT----EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CcEEEEECCCCEEEEeCCCCEEEEecccC-CC----CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce
Confidence 34555544555888887765432211110 00 0112267899999 8887666432 367
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE-EeeCCCcEEEEecCCCCCCC--ccccCCCCCceeEEEEcC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL-SCGNDHFARIWDIRRLEAGS--SLCDLPHKRVVNSAYFSP 216 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~~~--~~~~~~~~~~i~~~~~~~ 216 (396)
|..+|..++.... . . ........++++| +++.|+ +-+..+.|..|++....... .+.. ..+ ...+++++
T Consensus 167 v~~~d~~~~~~~~-~-~--~~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~ 238 (322)
T 2fp8_A 167 LIKYDPSTKETTL-L-L--KELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNA 238 (322)
T ss_dssp EEEEETTTTEEEE-E-E--EEESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECT
T ss_pred EEEEeCCCCEEEE-e-c--cCCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECC
Confidence 8888876543211 1 1 1111356799999 887554 44566899999986432111 1111 123 67788888
Q ss_pred CCCEEEEE
Q 016032 217 SGSKILTT 224 (396)
Q Consensus 217 ~~~~l~~~ 224 (396)
+|++.++.
T Consensus 239 ~G~l~va~ 246 (322)
T 2fp8_A 239 DGHFWVSS 246 (322)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEe
Confidence 88755554
No 253
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.87 E-value=3.8e-07 Score=73.52 Aligned_cols=206 Identities=12% Similarity=0.019 Sum_probs=127.4
Q ss_pred ceeEEEEecCCCcEEEEEeC--CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEE-EEEecCCeEEE
Q 016032 66 IVNNIRFNPTNDGTVYAASS--DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVV-LVADNFGFLYL 142 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~i 142 (396)
....+.|+|+ +.++++.+. ++.|++.|+.+++.+..+......+ ...+++. +..| ++.-.++.+.+
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f--------geGi~~~--g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF--------GEGLTLL--NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC--------EEEEEEE--TTEEEEEETTCSEEEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc--------eEEEEEe--CCEEEEEEecCCEEEE
Confidence 4689999998 655555543 6799999999999988877644321 3344554 4444 44556789999
Q ss_pred EeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCC---CceeEEEEcCCCC
Q 016032 143 VDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK---RVVNSAYFSPSGS 219 (396)
Q Consensus 143 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~ 219 (396)
+|..+.+....+... .. .- ..+++ ++..++++..++.|.++|..+.+....+..-... ..++.+.|. ++.
T Consensus 91 iD~~t~~v~~~i~~g--~~-~g--~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ--MK-DG--WGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EETTTTEEEEEEECC--SS-SC--CEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EECCCCcEEEEEECC--CC-Ce--EEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 999987665443211 11 11 22445 5565666667889999999876654444332111 236678888 675
Q ss_pred EEEEEeCCCcEEEEEcccccccCCCcceee-----cccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEE
Q 016032 220 KILTTSQDNRLRIWDSIFGNLDSPSREIVH-----SHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDF 294 (396)
Q Consensus 220 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~v 294 (396)
+.+....++.|.+.|..+++.......... .........+..++|+|+. .+++. ++...+.+.+
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~--------~~lfV---Tgk~~~~v~~ 232 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN--------KRIFV---TGKLWPKLFE 232 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT--------TEEEE---EETTCSEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC--------CEEEE---ECCCCCeEEE
Confidence 555554678999999999987543221000 0001111234578899874 23334 5666777888
Q ss_pred EEcCcc
Q 016032 295 IDITTG 300 (396)
Q Consensus 295 wd~~~~ 300 (396)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 877554
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=4.1e-07 Score=72.47 Aligned_cols=156 Identities=14% Similarity=0.153 Sum_probs=100.6
Q ss_pred cceeEEEEecCCCcEEEEEeCCC--eEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEE-EecCCeEE
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDG--TVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLV-ADNFGFLY 141 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~g~i~ 141 (396)
.-...|.|+ + +.++.+.+.+| .|+++|+.+++.+..+..+...+ -..++. .++.|.. .-.++.+.
T Consensus 43 ~ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F--------geGit~--~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 43 AFTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF--------GEGISD--WKDKIVGLTWKNGLGF 110 (262)
T ss_dssp CEEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC--------EEEEEE--ETTEEEEEESSSSEEE
T ss_pred cccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccc--------eeEEEE--eCCEEEEEEeeCCEEE
Confidence 345889998 5 67777777766 89999999999998887654321 223333 3444544 45688999
Q ss_pred EEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCC---CceeEEEEcCCC
Q 016032 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK---RVVNSAYFSPSG 218 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---~~i~~~~~~~~~ 218 (396)
++|..+.+...+... ... -..++ + ++..|+.+..++.|.++|..+.+....+...... ..++.+.|. +|
T Consensus 111 v~D~~t~~~~~ti~~-~~e---G~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 111 VWNIRNLRQVRSFNY-DGE---GWGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEETTTCCEEEEEEC-SSC---CCCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEECccCcEEEEEEC-CCC---ceEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999999776654322 112 12333 4 5566666666788999999876654444432222 234557776 66
Q ss_pred CEEEEEeCCCcEEEEEcccccc
Q 016032 219 SKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 219 ~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
.+.+..-.++.|.+.|..+++.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBE
T ss_pred EEEEEEccCCeEEEEECCCCcE
Confidence 5555444577888888877764
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.84 E-value=1e-06 Score=80.44 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=149.6
Q ss_pred EEEEeCCCcEEEeecccceeeeEecCCc-c--cceeE-EEEecCCCcEEEEEe------CCCeEEEEECCCCcccceeec
Q 016032 36 LLSGDKKGQVGVWDFYKVSEKIVYGNIH-S--CIVNN-IRFNPTNDGTVYAAS------SDGTVSCTDLETGLALSLMNV 105 (396)
Q Consensus 36 l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~--~~v~~-~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~ 105 (396)
|+.++.|+.+.-+|..+++.+....... . ..+.+ ..+. +..++.++ .++.|+.+|..+|+.+..+..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~---~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV---KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE---TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE---CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 6777889999999999988877653211 0 01211 1112 23555554 379999999999998877664
Q ss_pred CCCCCCC---C---------------------Ccc-----eeeeEEEeCCCCCEEEEEecC----------------CeE
Q 016032 106 NPNGWHG---P---------------------RTW-----RMLYGMDINPEKGVVLVADNF----------------GFL 140 (396)
Q Consensus 106 ~~~~~~~---~---------------------~~~-----~~v~~~~~~~~~~~l~~~~~~----------------g~i 140 (396)
....... + ..+ ..-..+++.+....++.+..+ +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 4321000 0 000 001134566777888887765 379
Q ss_pred EEEeCCCCCCCccceeeec-------CCccEEEEEec-cCCC---CEEEEeeCCCcEEEEecCCCCCCCccccCC-----
Q 016032 141 YLVDARTNSRSGEAILIHR-------KGSKVVGLHCN-PIQP---ELLLSCGNDHFARIWDIRRLEAGSSLCDLP----- 204 (396)
Q Consensus 141 ~i~d~~~~~~~~~~~~~~~-------~~~~i~~~~~~-~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~----- 204 (396)
..+|..+++........+. ...++. +... . ++ ..++.++.+|.++++|.++++.........
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 9999998876543322111 011222 2222 2 45 467778899999999988765422211100
Q ss_pred ------CCCc--------------------------eeEEEEcCCCCEEEEEeCC-------------------------
Q 016032 205 ------HKRV--------------------------VNSAYFSPSGSKILTTSQD------------------------- 227 (396)
Q Consensus 205 ------~~~~--------------------------i~~~~~~~~~~~l~~~~~d------------------------- 227 (396)
...+ -..++++|+..++++...+
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 0001 1246788877777665433
Q ss_pred --------------CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCC----CCCCceeeEeeeeeeecccccc
Q 016032 228 --------------NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPK----DPSESLAVIGRYISENYNGAAL 289 (396)
Q Consensus 228 --------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~g~~d 289 (396)
|.|..||+.+++. .|... .....+.+.|..++ .++.|
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~----------------------~W~~~~~~~~~~g~~~tagg~vf---~gt~d 493 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDY----------------------KWEKMERFAVWGGTMATAGDLVF---YGTLD 493 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCE----------------------EEEEEESSCCCSBCEEETTTEEE---EECTT
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCE----------------------EeEecCCCCccCcceEecCCEEE---EECCC
Confidence 3444444444432 12110 01122333355555 57889
Q ss_pred cceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcE-EEe
Q 016032 290 HPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDV-LAS 329 (396)
Q Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~s 329 (396)
+.++.||..+|+++.++..+.......+ .+..+|+. +++
T Consensus 494 g~l~A~D~~tG~~lW~~~l~~g~~~~P~-~y~~~G~qyv~~ 533 (599)
T 1w6s_A 494 GYLKARDSDTGDLLWKFKIPSGAIGYPM-TYTHKGTQYVAI 533 (599)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEEE
T ss_pred CeEEEEECCCCCEEEEeeCCCCcEeccE-EEEeCCEEEEEE
Confidence 9999999999999988876553333444 57778864 444
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.80 E-value=2.1e-06 Score=78.35 Aligned_cols=271 Identities=11% Similarity=0.025 Sum_probs=150.4
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCc-c--ccee-EEEEecC--CCc-EEEEEe------CCCeEEEEECCCCcccc
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIH-S--CIVN-NIRFNPT--NDG-TVYAAS------SDGTVSCTDLETGLALS 101 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~--~~v~-~~~~~~~--~~~-~l~s~~------~dg~v~iwd~~~~~~~~ 101 (396)
.++.++.|+.|.-+|..+++.+....... . ..+. ......+ +++ .+++++ .++.|..+|..+|+.+.
T Consensus 119 ~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 119 KVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 47777889999999999998877653211 1 0111 1111111 122 566654 37899999999998877
Q ss_pred eeecCCCCC-------------CCCCc-------------------ceeeeEEEeCCCCCEEEEEec-------------
Q 016032 102 LMNVNPNGW-------------HGPRT-------------------WRMLYGMDINPEKGVVLVADN------------- 136 (396)
Q Consensus 102 ~~~~~~~~~-------------~~~~~-------------------~~~v~~~~~~~~~~~l~~~~~------------- 136 (396)
......... .+... ...-..+++.|....++++..
T Consensus 199 ~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~ 278 (582)
T 1flg_A 199 MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAK 278 (582)
T ss_dssp EEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCT
T ss_pred ecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccC
Confidence 654321000 00000 000124567777777777663
Q ss_pred -------C----CeEEEEeCCCCCCCccceeeec-------CCccEEEEEec-cCCC---CEEEEeeCCCcEEEEecCCC
Q 016032 137 -------F----GFLYLVDARTNSRSGEAILIHR-------KGSKVVGLHCN-PIQP---ELLLSCGNDHFARIWDIRRL 194 (396)
Q Consensus 137 -------~----g~i~i~d~~~~~~~~~~~~~~~-------~~~~i~~~~~~-~~~~---~~l~~~~~d~~i~~wd~~~~ 194 (396)
+ +.|..+|..+++........+. ...++. +... . ++ ..++.++.+|.++++|..++
T Consensus 279 gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 279 GGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp TSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTC
T ss_pred CCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5899999999876654322111 011222 2221 2 45 37888899999999998775
Q ss_pred CCCCccccCC--------------------------------CCC-----------ceeEEEEcCCCCEEEEEeC-----
Q 016032 195 EAGSSLCDLP--------------------------------HKR-----------VVNSAYFSPSGSKILTTSQ----- 226 (396)
Q Consensus 195 ~~~~~~~~~~--------------------------------~~~-----------~i~~~~~~~~~~~l~~~~~----- 226 (396)
+......... ... .-..++++|+..++++...
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 5321111000 000 0124567776556655432
Q ss_pred ----------------------------CCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee
Q 016032 227 ----------------------------DNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR 278 (396)
Q Consensus 227 ----------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (396)
+|.|..||+.+++..-... .. .|. ....+...|.
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~-----~~------------~~~-~~g~~~tagg 498 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHK-----EH------------LPL-WAGVLATAGN 498 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEE-----ES------------SCC-CSCCEEETTT
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEec-----CC------------CCC-cccceEeCCC
Confidence 4567777777666421110 00 000 1122333355
Q ss_pred eeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEe
Q 016032 279 YISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLAS 329 (396)
Q Consensus 279 ~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 329 (396)
+++ .|+.|+.++.||..+|+.+.++..........+ .+..+|+..++
T Consensus 499 lvf---~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~-~y~~~G~qYv~ 545 (582)
T 1flg_A 499 LVF---TGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPI-TWEQDGEQYLG 545 (582)
T ss_dssp EEE---EECTTSEEEEEETTTCCEEEEEECSSCCCSCCE-EEEETTEEEEE
T ss_pred EEE---EECCCCcEEEEECCCCCEEEEecCCCCcccCce-EEEECCEEEEE
Confidence 555 578899999999999999998876653333344 67788864443
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=1.7e-05 Score=66.46 Aligned_cols=207 Identities=13% Similarity=0.049 Sum_probs=121.7
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC-C-eE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD-G-TV 89 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g-~v 89 (396)
.+..+... .....++|++++ +++++-..++.|..||...... .... ....+..+++.++ ++++++.... + .|
T Consensus 24 ~~~~~p~~-~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~~~-~~~~--~~~~p~gia~~~d-G~l~vad~~~~~~~v 97 (306)
T 2p4o_A 24 IITSFPVN-TFLENLASAPDG-TIFVTNHEVGEIVSITPDGNQQ-IHAT--VEGKVSGLAFTSN-GDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEECTT-CCEEEEEECTTS-CEEEEETTTTEEEEECTTCCEE-EEEE--CSSEEEEEEECTT-SCEEEEEECTTSCEE
T ss_pred EeEeCCCC-CCcceEEECCCC-CEEEEeCCCCeEEEECCCCceE-EEEe--CCCCceeEEEcCC-CcEEEEeccCCcceE
Confidence 33444332 567899999998 5777766788999999876432 2222 2356889999998 7765554332 2 47
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCC-Cc---c-ce--eeecCCc
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSR-SG---E-AI--LIHRKGS 162 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~-~~---~-~~--~~~~~~~ 162 (396)
..++..+++.......... .....++..+++..+++-..++.|+.+|...+.. .. . .. .....-.
T Consensus 98 ~~~d~~~g~~~~~~~~~~~--------~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDA--------IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEEECTTSCEEEEEECTTC--------SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EEEcCCCCeEEEEEeCCCc--------cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 6777777765433332111 1134445455554444444688999999865310 00 0 00 0001111
Q ss_pred cEEEEEeccCCCC-EEEEeeCCCcEEEEecCC-CCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 016032 163 KVVGLHCNPIQPE-LLLSCGNDHFARIWDIRR-LEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 163 ~i~~~~~~~~~~~-~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
....+ +| ++. ++++-...+.|..+++.. .... ....+........++++++|+++++....+.|.++|..
T Consensus 170 ~pngi--s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~-~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 170 AANGL--KR-FGNFLYVSNTEKMLLLRIPVDSTDKPG-EPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp SEEEE--EE-ETTEEEEEETTTTEEEEEEBCTTSCBC-CCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred cCCCc--Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCC-ccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 34555 66 555 455556678999999864 2111 11111111345678999999877776677899999875
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.79 E-value=4.1e-05 Score=73.25 Aligned_cols=296 Identities=9% Similarity=0.048 Sum_probs=167.7
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC------CcccceeEEEEecCCCcEEEEEeCCCeEEEEE
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN------IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 93 (396)
...|.++...+++ . |..|+.++-+.+||..+......... .....|.++...++ +. |..|+.+ -|.+|+
T Consensus 214 ~~~i~~i~~d~~g-~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~-lWigt~~-Gl~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPT-R-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQ-NR-LWIGTFN-DLNIYH 288 (795)
T ss_dssp CCCEEEEEEEETT-E-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTT-SC-EEEEESS-CEEEEE
T ss_pred CCeeEEEEEcCCC-C-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCC-CC-EEEEeCC-hhheEc
Confidence 4568888888877 4 44454444588999877554332211 12456999988876 54 4445555 488899
Q ss_pred CCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccce---eeecCCccEEEEEec
Q 016032 94 LETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAI---LIHRKGSKVVGLHCN 170 (396)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~---~~~~~~~~i~~~~~~ 170 (396)
..++.............. -....|.++...++|. |.+|+.++-|..++........-.. ...-....|.++...
T Consensus 289 ~~~~~~~~~~~~~~~~~~--l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d 365 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGS--LSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVED 365 (795)
T ss_dssp TTTTEEEEECCCTTSTTS--CSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEEC
T ss_pred CCCCeEEEEecCCCCCCC--CCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEEC
Confidence 877654332211111000 1112388999988887 5567777778888876543211000 000123368999888
Q ss_pred cCCCCEEEEeeCCCcEEEEecCCCCCCCccccC------CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 171 PIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL------PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 171 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
+ +++ |..|+.++-|..|+..+.......... -....|.++...+++.+|..|+.++-|.+||..+++...-.
T Consensus 366 ~-~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 366 K-DKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp T-TSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred C-CCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 7 655 555777778999997653221111000 02356899999888885777787778999998876542110
Q ss_pred cceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcC-----CCCCCCcceee
Q 016032 245 REIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD-----PNITTISPVNK 319 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~-----~~~~~i~~~~~ 319 (396)
. ............+..+++ |++.+ |+. +-|.+|+..+++....... -....+.++ .
T Consensus 444 ~----~~~~l~~~~v~~i~~d~~---------g~lwi----gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~ 504 (795)
T 4a2l_A 444 Q----RNSQLVNENVYAILPDGE---------GNLWL----GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTL-F 504 (795)
T ss_dssp T----TTSCCSCSCEEEEEECSS---------SCEEE----EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEE-E
T ss_pred c----CCCCcCCCeeEEEEECCC---------CCEEE----Eec-CceeEEeCCCCeEEEccccccccccCCceEEEE-E
Confidence 0 000000111223344443 44444 233 3488899877654322111 111345555 5
Q ss_pred eccCCcEEEeecCCcEEEEcCCCcce
Q 016032 320 LHPRDDVLASGSSRSIFIWRPKEKSE 345 (396)
Q Consensus 320 ~~~~~~~l~sg~d~~i~iw~~~~~~~ 345 (396)
..++|.+.+... +.|..|+..+++.
T Consensus 505 ~d~~g~lWigt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 505 RDSHKRLWIGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp ECTTCCEEEEES-SCEEEEEEETTEE
T ss_pred ECCCCCEEEEeC-CceEEEeCCCCeE
Confidence 778888776655 5688888766543
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.77 E-value=1.3e-06 Score=81.50 Aligned_cols=115 Identities=10% Similarity=0.060 Sum_probs=73.4
Q ss_pred EEEecC-CCCcEEEEEeCCC-----------cEEEeecccceee--eEecCCcccceeEEEEecCCCcEEEEEeC-CCeE
Q 016032 25 CLEFHP-TNNHILLSGDKKG-----------QVGVWDFYKVSEK--IVYGNIHSCIVNNIRFNPTNDGTVYAASS-DGTV 89 (396)
Q Consensus 25 ~~~~~~-~~~~~l~s~~~dg-----------~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~v 89 (396)
++++.| ++ ++++.|+.+. .+.+||..++.-. ......+.....++++.++ +.+++.|+. +..+
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~-g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN-GQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT-SCEEEECSSSTTCE
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCC-CCEEEeCCCCCCce
Confidence 566777 66 7888887543 5889998876422 2222223333445777777 888888884 5689
Q ss_pred EEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-cC-----CeEEEEeCCCCC
Q 016032 90 SCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-NF-----GFLYLVDARTNS 149 (396)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----g~i~i~d~~~~~ 149 (396)
.+||..+.+....-..+.. ..-.+++..++++.++.|+ .+ ..+.+||+.+..
T Consensus 268 ~~yd~~t~~W~~~~~~~~~--------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVA--------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEEGGGTEEEECCCCSSC--------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EEecCcCCceeECCCCCcc--------ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9999987654332211111 1123455667899999988 34 478999998754
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.76 E-value=6.2e-05 Score=64.13 Aligned_cols=200 Identities=8% Similarity=0.061 Sum_probs=122.4
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
+.+..+|.+..++. .++++ . ...|+..++......... . ....+..++|.+..+.++++-...+.|..+++....
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~-~-~~~I~~i~~~g~~~~~~~-~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFA-N-RIDIRQVLPHRSEYTLLL-N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEE-C-BSCEEEECTTSCCEEEEE-C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCCcccccccCc-eeEee-c-ccceEEEeCCCCeeEEee-c-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34556777777744 44433 3 346888888765544443 2 334578999998735555555567899999988665
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEE-EEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEE
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVV-LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELL 177 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 177 (396)
....+.... .....+++.+.+..| ++-...+.|.+.++...... . ...........+++.|..+.++
T Consensus 107 ~~~~~~~~~---------~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~-l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 107 VEEVVSTGL---------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--V-LLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp CEEEECSSC---------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--E-EECTTCSCEEEEEEETTTTEEE
T ss_pred ceEEEeCCC---------CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE--E-EEeCCCCCcceEEEecCcCeEE
Confidence 433222111 115678888765555 44455678999998753321 1 1222233578999998455555
Q ss_pred EEeeCC-CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccc
Q 016032 178 LSCGND-HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIF 237 (396)
Q Consensus 178 ~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 237 (396)
++-... +.|..+++..... ..+.. ..-...+.++++|++..|+.+. ..+.|..+|+..
T Consensus 175 ~td~~~~~~I~r~~~dG~~~-~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSGR-RIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEECSSSCEEEEEETTSCSC-EESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeccCCCCEEEEEeCCCCCc-EEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 555555 7888888753221 11111 2234578999998766666554 467899999864
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.75 E-value=6.3e-05 Score=71.95 Aligned_cols=296 Identities=9% Similarity=0.048 Sum_probs=166.4
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-----CCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-----NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
...|.++...++|. |-.|+.++-|..|+..+........ ......|.++...++ + .|..|+.++-|..|+.
T Consensus 309 ~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-g-~lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-K-NLWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-S-CEEEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-C-CEEEEECCCCeEEEcC
Confidence 35799999999883 5667777789999876654322211 012456899988776 4 4566777777999998
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccce-eeecCCccEEEEEeccCC
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAI-LIHRKGSKVVGLHCNPIQ 173 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~ 173 (396)
.++............ ...-....|.++...+++..|.+|+.++-|..+|..++....-.. ........|.++...+ +
T Consensus 385 ~~~~~~~~~~~~~~~-~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~ 462 (795)
T 4a2l_A 385 ITQRFTSYTLQEDES-ARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-E 462 (795)
T ss_dssp TTCCEEEECCC-------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-S
T ss_pred CCCcEEEEecCCCCc-ccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-C
Confidence 776543322111000 000001238889888888867777877789999988754221000 0001234688998887 6
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCcccc----CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceee
Q 016032 174 PELLLSCGNDHFARIWDIRRLEAGSSLCD----LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVH 249 (396)
Q Consensus 174 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 249 (396)
+.+.+.. . +-|.+||..+.+....... .-....|.++...++|.+.+.. . +-|..||..+++. . ......
T Consensus 463 g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~-~-~~~~~~ 536 (795)
T 4a2l_A 463 GNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI-Q-KASILP 536 (795)
T ss_dssp SCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE-E-ECCCSC
T ss_pred CCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE-E-EecCCC
Confidence 6655544 4 4588898765322111100 0123578999999888766544 4 5688899876553 1 000000
Q ss_pred cccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhh--hhcCCCCCCCcceeeeccCCcEE
Q 016032 250 SHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVA--EVMDPNITTISPVNKLHPRDDVL 327 (396)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l 327 (396)
.... .......+..+++ |++.+ |+.. -|..||..+++... ...+-....+.++ ...++|.+.
T Consensus 537 ~~~l-~~~~i~~i~~d~~---------g~lWi----gT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i-~~d~~g~lW 600 (795)
T 4a2l_A 537 VSNV-TKLFTNCIYEASN---------GIIWV----GTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGI-LEDSFGRLW 600 (795)
T ss_dssp SCGG-GGSCEEEEEECTT---------SCEEE----EESS-CEEEEETTTTEEEEECGGGTCSCSCEEEE-EECTTSCEE
T ss_pred CCCC-CCCeeEEEEECCC---------CCEEE----EeCC-CceeECCCCCcEEEeCCCCCCchhheEEE-EECCCCCEE
Confidence 0000 0111223444444 54443 2223 47888876654322 1112222345555 567788877
Q ss_pred EeecCCcEEEEcCCCcc
Q 016032 328 ASGSSRSIFIWRPKEKS 344 (396)
Q Consensus 328 ~sg~d~~i~iw~~~~~~ 344 (396)
+++. +.|..|+..+++
T Consensus 601 i~t~-~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 601 LSTN-RGISCFNPETEK 616 (795)
T ss_dssp EEET-TEEEEEETTTTE
T ss_pred EEcC-CceEEEcCCCCc
Confidence 6664 556777776654
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=5e-05 Score=65.73 Aligned_cols=263 Identities=10% Similarity=0.072 Sum_probs=146.4
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.-.|.+..+.. . |+.+. ...|+..++......... . ....+..++|.+..+.++++-...+.|..+++.......
T Consensus 78 ~~~C~~~~~~~-~-l~~~~-~~~I~~i~~~~~~~~~~~-~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 78 RRSCKALGPEP-V-LLFAN-RIDIRQVLPHRSEYTLLL-N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp SSCEEECSSCC-E-EEEEC-BSCEEEECTTSCCCEEEE-C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred CCeECCccccc-e-eEeec-CccceeeccCCCcEEEEe-c-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE
Confidence 44566665643 3 33333 357888888776544444 2 334578999998735555565667899999988665333
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEE-EEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEe
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVL-VADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC 180 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 180 (396)
.+.... .....+++.+.+..|+ +-...+.|.+.++...... . ...........+++.|..+.++++-
T Consensus 153 ~~~~~~---------~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~--~-l~~~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 153 VVSTGL---------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--V-LLWQSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp EECSSC---------SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE--E-EECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEeCCC---------CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE--E-eecCCCCCCcEEEEEcCCCeEEEec
Confidence 322111 1156788887655554 4455678888887653211 1 1222223678999998445555555
Q ss_pred eCC-CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccccCCCcceeecccccccCC
Q 016032 181 GND-HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLT 258 (396)
Q Consensus 181 ~~d-~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 258 (396)
... +.|..+++..... ..+.. ..-...+.|+|+|++..|+.+. ..+.|..+|+..... ..+. .. ....
T Consensus 221 ~~~~~~I~r~~~dG~~~-~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~~~~-~~---~~~~ 290 (386)
T 3v65_B 221 WGNTPRIEASSMDGSGR-RIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR----KAVI-SQ---GLPH 290 (386)
T ss_dssp CSSSCEEEEEETTSCSC-EEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC----EEEE-CS---SCSS
T ss_pred cCCCCEEEEEeCCCCCc-EEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee----EEEE-EC---CCCC
Confidence 445 7788888753221 11111 2234578999998666665554 467799998764221 1111 10 1112
Q ss_pred ceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCc
Q 016032 259 PFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDD 325 (396)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 325 (396)
|..++... +.+.. +....+.|..++..+|+.+..+.... .....+..++|..+
T Consensus 291 P~giav~~----------~~ly~---td~~~~~V~~~~~~~G~~~~~i~~~~-~~p~gi~v~~~~~q 343 (386)
T 3v65_B 291 PFAITVFE----------DSLYW---TDWHTKSINSANKFTGKNQEIIRNKL-HFPMDIHTLHPQRQ 343 (386)
T ss_dssp EEEEEEET----------TEEEE---EETTTTEEEEEETTTCCSCEEEECSC-SCCCCEEEESGGGS
T ss_pred ceEEEEEC----------CEEEE---eeCCCCeEEEEECCCCcceEEEccCC-CCCceEEEEchhcC
Confidence 33333321 22222 23455678888877777666655432 33344434555443
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.69 E-value=5.5e-05 Score=63.52 Aligned_cols=207 Identities=13% Similarity=0.013 Sum_probs=125.4
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccc---eeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKV---SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
...+..++|++.+++++++-...+.|..+++.+. .....+....-.....+++.+.++.++++-...+.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3457799999876567777777789999998761 2222222222345688999876355556666788999999875
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC--CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF--GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
......+.... .....+++.|.+..|+.+... +.|..+++..... .. .....-.....+++++..+
T Consensus 109 ~~~~~~~~~~~---------~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~--~~-~~~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 109 VKRKTLFRENG---------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YS-LVTENIQWPNGITLDLLSG 176 (316)
T ss_dssp SSEEEEEECTT---------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EE-EECSSCSCEEEEEEETTTT
T ss_pred CceEEEEECCC---------CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe--EE-EEECCCCCceEEEEeccCC
Confidence 43332222111 127889999977666655542 6888888754221 11 1112233678999998344
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 175 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
.++++-+..+.|..+|+.... ...+... ........+++. .+.++++-...+.|..++..+++.
T Consensus 177 ~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 177 RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 555555567799999986322 2222111 122345677875 355555555678899999877654
No 264
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.68 E-value=6.9e-06 Score=65.44 Aligned_cols=156 Identities=11% Similarity=0.075 Sum_probs=103.1
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEe
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVD 144 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d 144 (396)
.-...|.|+. +.++++.+.+|.|+++|+.+++.+..+ .+...+ ...+++.. +...++.-.++.+.+||
T Consensus 55 ~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~F--------geGit~~g-~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 55 AFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIF--------AEGLASDG-ERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp CCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCC--------EEEEEECS-SCEEEEESSSCEEEEEE
T ss_pred cccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcc--------eeEEEEeC-CEEEEEEccCCEEEEEE
Confidence 3457888873 677888888999999999999998888 654321 23355543 34555566789999999
Q ss_pred CCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCC---CceeEEEEcCCCCEE
Q 016032 145 ARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK---RVVNSAYFSPSGSKI 221 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l 221 (396)
..+.+...++.. ... -..++ + ++..|+.+..++.|.++|..+.+....+...... ..++.+.|. +|.+.
T Consensus 123 ~~Tl~~~~ti~~-~~e---GwGLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 123 GMPPQRERTTRY-SGE---GWGLC--Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp TTTTEEEEEEEC-SSC---CCCEE--E-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred CCcCcEEEEEeC-CCc---eeEEe--c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 999776654322 122 23344 3 5666666667899999999876654444432222 234667776 66555
Q ss_pred EEEeCCCcEEEEEcccccc
Q 016032 222 LTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 222 ~~~~~d~~i~iwd~~~~~~ 240 (396)
+..-.++.|.+.|..+++.
T Consensus 195 anvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEETTCSEEEEECTTTCBE
T ss_pred EEECCCCeEEEEeCCCCcE
Confidence 4444577888888877664
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.66 E-value=1.9e-05 Score=69.37 Aligned_cols=157 Identities=10% Similarity=0.065 Sum_probs=92.2
Q ss_pred ceeEEEEecC-CCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC-----e
Q 016032 66 IVNNIRFNPT-NDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-----F 139 (396)
Q Consensus 66 ~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g-----~ 139 (396)
....|+|.|+ ....|+.+...+.|+.++..++....... .. .....++++++++ |+++...+ .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~---------~~P~giavd~dG~-lyVad~~~~~~~~g 208 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NI---------GQCADVNFTLNGD-MVVVDDQSSDTNTG 208 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CC---------SCEEEEEECTTCC-EEEEECCSCTTSEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CC---------CCccEEEECCCCC-EEEEcCCCCcccce
Confidence 4678999983 24455555544889999988776554332 11 2278999999999 55444321 2
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS 219 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (396)
+..++......... ... .......++++|.++.++++-..++.|+.+|..+......+...+.......++|+|+++
T Consensus 209 v~~~~~~~~~~~~~--~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 209 IYLFTRASGFTERL--SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp EEEECGGGTTCCEE--EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred EEEEECCCCeeccc--ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 33333322111101 111 122456788888556666666677889999986433211222222223345799999999
Q ss_pred EEEEE-eCCCcEEEEEcc
Q 016032 220 KILTT-SQDNRLRIWDSI 236 (396)
Q Consensus 220 ~l~~~-~~d~~i~iwd~~ 236 (396)
.|+.+ ...+.|..+++.
T Consensus 286 ~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 286 WAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEEETTTTEEEEEEBC
T ss_pred EEEEEeCCCCEEEEEeCC
Confidence 65555 456789998865
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.63 E-value=9.1e-05 Score=63.12 Aligned_cols=204 Identities=9% Similarity=0.028 Sum_probs=126.3
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
..+..++|++.++.++.+-...+.|..+++.......... ........+++.+.++.++++-...+.|.+.++......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 3467899998765666666677889999988765444332 223456789998863556666666789999998754332
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-cC-CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-NF-GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+.... .....+++.|.+..|+.+. .. +.|..+++...... .+ ..........++++|.++.+++
T Consensus 152 ~l~~~~l---------~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~--~~~~~~~PnGla~d~~~~~lY~ 219 (349)
T 3v64_C 152 VLLWQSL---------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II--ADTHLFWPNGLTIDYAGRRMYW 219 (349)
T ss_dssp EEECTTC---------SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ES--CCSSCSCEEEEEEETTTTEEEE
T ss_pred EEEeCCC---------CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EE--EECCCCCcceEEEeCCCCEEEE
Confidence 2221110 1268899999766665554 34 78888887653221 11 1122335789999984555555
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
+-+..+.|..+|+..... ..+.. ........+++. .+.++++-...+.|..++..+|+.
T Consensus 220 aD~~~~~I~~~~~dG~~~-~~~~~-~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 220 VDAKHHVIERANLDGSHR-KAVIS-QGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EETTTTEEEEEETTSCSC-EEEEC-SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EECCCCEEEEEeCCCCce-EEEEe-CCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCc
Confidence 656678899999864221 12211 123456777773 455555555677888888666654
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.63 E-value=4.6e-05 Score=65.98 Aligned_cols=204 Identities=9% Similarity=0.030 Sum_probs=126.9
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
..+..++|++.+..++++-...+.|..+++.......... ........+++.+.++.++++-...+.|.+.++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 4577899998665666676677889999988765444332 223456788898864556666666788998888754332
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-C-CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-F-GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+.... .....+++.|.+..|+.+.. . +.|..+++...... . ...........|+++|..+.+++
T Consensus 195 ~l~~~~l---------~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~-~~~~~~~~PnGlavd~~~~~lY~ 262 (386)
T 3v65_B 195 VLLWQSL---------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--I-IADTHLFWPNGLTIDYAGRRMYW 262 (386)
T ss_dssp EEECSSC---------SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--E-EECSSCSCEEEEEEEGGGTEEEE
T ss_pred EeecCCC---------CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE--E-EEECCCCCeeeEEEeCCCCEEEE
Confidence 2221111 12788999987776666543 3 67888887653221 1 11122235789999984555556
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
+-+..+.|..+|+..... ..+.. ........+++. .+.++++-...+.|..++..+|+.
T Consensus 263 aD~~~~~I~~~d~dG~~~-~~~~~-~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 263 VDAKHHVIERANLDGSHR-KAVIS-QGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp EETTTTEEEEECTTSCSC-EEEEC-SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EECCCCEEEEEeCCCCee-EEEEE-CCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcc
Confidence 666678899999863221 12211 123456778873 455556666678888888666654
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=8.1e-06 Score=77.28 Aligned_cols=197 Identities=13% Similarity=0.081 Sum_probs=109.8
Q ss_pred CeEEEEec-CCCCcEEEEEeCCC----cEEEeecccc-eeeeEecCCcccceeEEEEecCCCcEEEEEeCC-----CeEE
Q 016032 22 RVTCLEFH-PTNNHILLSGDKKG----QVGVWDFYKV-SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD-----GTVS 90 (396)
Q Consensus 22 ~v~~~~~~-~~~~~~l~s~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~ 90 (396)
.+...+|| |||..++++.+.+| .|+++|+.++ +.+... -......++|+|+ ++.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~~~~~~~~WspD-g~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VSGTNGEIVWGPD-HTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EEEECSCCEECSS-TTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---ccCceeeEEEecC-CCEEEEEEECCCCCCCEEE
Confidence 67889999 99954444544444 4999999987 532111 1122457899999 6666655544 3688
Q ss_pred EEECCCCcccc--eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec---CCeEEEEeCCCCCCCc--cceeeecCCcc
Q 016032 91 CTDLETGLALS--LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN---FGFLYLVDARTNSRSG--EAILIHRKGSK 163 (396)
Q Consensus 91 iwd~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~g~i~i~d~~~~~~~~--~~~~~~~~~~~ 163 (396)
++++.+++... .+...... ....+.|+|++++|+.... ...|+++|+.++.... .. ........
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~--------~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~-l~~~~~~~ 321 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPL--------FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEI-VRPREKGV 321 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTT--------CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEE-SSCCCTTC
T ss_pred EEECCCCchhcEEEEecCCCc--------eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEE-eecCCCCc
Confidence 88887765332 22211111 1567889999999887653 3478899988752111 11 11112234
Q ss_pred EEEEEeccCCCCEEEEeeCC----CcEEEEecCCCCCCCc-cccCCCCC--ceeEEEEcCCCCEEEEEeCCCcEE--EEE
Q 016032 164 VVGLHCNPIQPELLLSCGND----HFARIWDIRRLEAGSS-LCDLPHKR--VVNSAYFSPSGSKILTTSQDNRLR--IWD 234 (396)
Q Consensus 164 i~~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~~~~~-~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~--iwd 234 (396)
...+.|+. .+.+++....+ ..|..+++.+...... + +.+.. .+..+.+. .+.++++...++..+ +++
T Consensus 322 ~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~l--i~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~d 397 (751)
T 2xe4_A 322 RYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVL--VDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMM 397 (751)
T ss_dssp CEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEE--ECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEE
T ss_pred eEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeE--ECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEe
Confidence 45555554 44444444443 2566677653211122 2 22322 45555554 334556666677644 455
Q ss_pred c
Q 016032 235 S 235 (396)
Q Consensus 235 ~ 235 (396)
+
T Consensus 398 l 398 (751)
T 2xe4_A 398 A 398 (751)
T ss_dssp C
T ss_pred c
Confidence 4
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.61 E-value=0.00013 Score=63.34 Aligned_cols=209 Identities=13% Similarity=0.013 Sum_probs=127.2
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce---eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECC
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLE 95 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (396)
....+..|+|++.+..++.+-...+.|+.+++.... ....+..........+++.+.++.++++-...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 345688999998765666666667889999887521 12222222345678899988536666666678899999987
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCC
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQ 173 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 173 (396)
.......+.... .....+++.|.+..|+.+.. .+.|...++...... . .....-.....|++++..
T Consensus 190 g~~~~~l~~~~~---------~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~-~--~~~~~l~~P~glavd~~~ 257 (400)
T 3p5b_L 190 GVKRKTLFRENG---------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-S--LVTENIQWPNGITLDLLS 257 (400)
T ss_dssp TCSEEEEEECSS---------CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE-E--EECSSCSCEEEEEEETTT
T ss_pred CCceEEEEeCCC---------CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE-E--EEECCCCceEEEEEEeCC
Confidence 654433332111 12788999997776666653 368888888653221 1 111222367899999834
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 174 PELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 174 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
+.++++-+..+.|..+|+........+...........+++. .+.++++-...+.|..+|..+|+.
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 258 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCC
T ss_pred CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCc
Confidence 445555556788999998643221122111122345567773 344555666678899999777764
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.60 E-value=6.4e-05 Score=60.26 Aligned_cols=166 Identities=10% Similarity=0.106 Sum_probs=103.1
Q ss_pred CCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeE
Q 016032 61 NIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFL 140 (396)
Q Consensus 61 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i 140 (396)
.+-...+..++|+|+++.++++...++.|...|.. ++....+..... .....+++.+++.++++.-.++.+
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~--------~D~EGIa~~~~g~~~vs~E~~~~l 93 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV--------KDLETIEYIGDNQFVISDERDYAI 93 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC--------SSEEEEEECSTTEEEEEETTTTEE
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC--------CChHHeEEeCCCEEEEEECCCCcE
Confidence 45556799999999844555667778999999988 777777654321 126788888888877776677889
Q ss_pred EEEeCCCCCCCc--cceee----ecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc--------CCCC
Q 016032 141 YLVDARTNSRSG--EAILI----HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD--------LPHK 206 (396)
Q Consensus 141 ~i~d~~~~~~~~--~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--------~~~~ 206 (396)
.++++....... ..... .........++|.| .++.|+++.+.....+|.+........+.. ....
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~ 172 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL 172 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc
Confidence 999876644311 11110 12233468999999 666666666555555555531000001110 0123
Q ss_pred CceeEEEEcC-CCCEEEEEeCCCcEEEEEcc
Q 016032 207 RVVNSAYFSP-SGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 207 ~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 236 (396)
..+.+++++| .+.+++.+.....|.++|..
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 4568899999 45555666666777777754
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00014 Score=69.42 Aligned_cols=295 Identities=7% Similarity=-0.041 Sum_probs=160.3
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-------------CCcccceeEEEEecCCCcEEEEEeCC
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-------------NIHSCIVNNIRFNPTNDGTVYAASSD 86 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~l~s~~~d 86 (396)
...|.++...++| . |..|...+-|.+++..+........ ......|.++...++ + .|..|+.+
T Consensus 257 ~~~i~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~-g-~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDN-K-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSF-N-NIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTS-E-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSS-C-CEEEEEBS
T ss_pred CceEEEEEECCCC-C-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCC-C-CEEEEecC
Confidence 3568999988887 4 5556664568888887654322110 123457899988876 4 45666766
Q ss_pred CeEEEEECCCCcccceeecCCC-CCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 87 GTVSCTDLETGLALSLMNVNPN-GWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
+-|..++..+..... +..... .....-....|.++...+++. |.+|+.++-|..++..+.....-..........|.
T Consensus 333 ~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~ 410 (781)
T 3v9f_A 333 GGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL 410 (781)
T ss_dssp SCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEE
T ss_pred CeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE
Confidence 678888877654322 211100 000000112388888888776 55666667788898865422110000011234688
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCC
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPS 244 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 244 (396)
++...+ ++.+ ..|+.++-|..+|..+.+.. .+.. ......|.++...+++.+. .|+. +-|..||..+++....
T Consensus 411 ~i~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~- 484 (781)
T 3v9f_A 411 CSLKDS-EGNL-WFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHH- 484 (781)
T ss_dssp EEEECT-TSCE-EEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEE-
T ss_pred EEEECC-CCCE-EEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEec-
Confidence 888876 5554 44666677888987643221 1110 1134578999988887644 4555 5688999877654210
Q ss_pred cceeeccc-ccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc---CCCCCCCcceeee
Q 016032 245 REIVHSHD-FNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM---DPNITTISPVNKL 320 (396)
Q Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~---~~~~~~i~~~~~~ 320 (396)
..... .........+..+++ |++.+ |+..+-|..||..+++... +. +-....+.++ ..
T Consensus 485 ---~~~~~~~~~~~~i~~i~~d~~---------g~lWi----gt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~~i-~~ 546 (781)
T 3v9f_A 485 ---YDTSNSQLLENFVRSIAQDSE---------GRFWI----GTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTINQI-YR 546 (781)
T ss_dssp ---ECTTTSSCSCSCEEEEEECTT---------CCEEE----EESSSCEEEECTTCCEEEE-ECTTTTCSCSCEEEE-EE
T ss_pred ---ccCcccccccceeEEEEEcCC---------CCEEE----EEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeEEE-EE
Confidence 00000 000111223444443 44444 3333347778876554322 21 1122345555 56
Q ss_pred ccCCcEEEeecCCcEEEEcCCCcc
Q 016032 321 HPRDDVLASGSSRSIFIWRPKEKS 344 (396)
Q Consensus 321 ~~~~~~l~sg~d~~i~iw~~~~~~ 344 (396)
.++|.+.++...|.|..|+..+++
T Consensus 547 d~~g~lWi~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 547 SSKGQMWLATGEGLVCFPSARNFD 570 (781)
T ss_dssp CTTSCEEEEETTEEEEESCTTTCC
T ss_pred CCCCCEEEEECCCceEEECCCCCc
Confidence 778887666555555888887665
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=3.7e-05 Score=67.54 Aligned_cols=157 Identities=15% Similarity=0.177 Sum_probs=96.4
Q ss_pred ceeEEEEec-CCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-C----e
Q 016032 66 IVNNIRFNP-TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-G----F 139 (396)
Q Consensus 66 ~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-g----~ 139 (396)
....|+++| + ...|+.+...+.|+.+|+.++....... .. .....++++++++.|+++... + .
T Consensus 138 ~P~~lavdp~~-~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~---------~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 138 GAVWLSFDPKN-HNHLYLVGEQHPTRLIDFEKEYVSTVYS-GL---------SKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CCCEEEEETTE-EEEEEEEEBTEEEEEEETTTTEEEEEEC-CC---------SCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CCCEEEECCCC-CCeEEEEeCCCcEEEEECCCCEEEEEec-CC---------CCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 457889998 4 4556665555889999988765443332 11 227899999999966666542 2 3
Q ss_pred EEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCC
Q 016032 140 LYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGS 219 (396)
Q Consensus 140 i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (396)
+..++.. +...... ... .......++++|.++.++++-...+.|+.++....... .+...........++|+|+++
T Consensus 207 v~~~~~~-g~~~~~~-~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 207 NYILTRE-SGFKVIT-ELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp EEEEEGG-GTSCSEE-EEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSS
T ss_pred EEEEeCC-Cceeeee-eec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCC
Confidence 4444432 2221111 111 12245678899855666666667789999998643221 122222234578899999999
Q ss_pred EEEEE-eCCCcEEEEEccc
Q 016032 220 KILTT-SQDNRLRIWDSIF 237 (396)
Q Consensus 220 ~l~~~-~~d~~i~iwd~~~ 237 (396)
+|+.+ ...+.|..++...
T Consensus 283 ~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEETTTTEEEEEEEET
T ss_pred EEEEEECCCCEEEEEeCCc
Confidence 55544 4577899988763
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.55 E-value=0.00023 Score=59.43 Aligned_cols=228 Identities=9% Similarity=0.001 Sum_probs=126.4
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC--CeEEE
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF--GFLYL 142 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--g~i~i 142 (396)
.....++|.++ +.++++-..++.|..||.... ....+... ..+..+++.++++++++.... ..|..
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~----------~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVGEIVSITPDGN-QQIHATVE----------GKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEECTTCC-EEEEEECS----------SEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCC-CCEEEEeCCCCeEEEECCCCc-eEEEEeCC----------CCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 45778999998 777777667899999997753 33333221 137889999999966655433 24777
Q ss_pred EeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCC-----cc---ccCCCCCceeEEEE
Q 016032 143 VDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS-----SL---CDLPHKRVVNSAYF 214 (396)
Q Consensus 143 ~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~-----~~---~~~~~~~~i~~~~~ 214 (396)
+|..+++.. .... .........++..+ ++..+++-..++.|+.+|........ .+ .....-...+.+
T Consensus 100 ~d~~~g~~~-~~~~-~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 100 LVKSDGTVE-TLLT-LPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EECTTSCEE-EEEE-CTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EcCCCCeEE-EEEe-CCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 777665432 1111 11122344555555 55555555568899999875421000 00 001112234555
Q ss_pred cCCCCEEEEEe-CCCcEEEEEccc-ccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccce
Q 016032 215 SPSGSKILTTS-QDNRLRIWDSIF-GNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPI 292 (396)
Q Consensus 215 ~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i 292 (396)
+|++..|+++. ..+.|..|++.. +.. .... .... + ..+-.++++++ |++.. +....+.|
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~-~~~~-~~~~--~---~~P~gi~vd~d---------G~l~v---a~~~~~~V 235 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKP-GEPE-IFVE--Q---TNIDDFAFDVE---------GNLYG---ATHIYNSV 235 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCB-CCCE-EEEE--S---CCCSSEEEBTT---------CCEEE---ECBTTCCE
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCC-CccE-EEec--c---CCCCCeEECCC---------CCEEE---EeCCCCeE
Confidence 78887665554 567899999875 332 1111 1110 0 12334556665 55544 33445779
Q ss_pred EEEEcCccch--hhhhcCCCCCCCcceeeec---cCCcEEEeec
Q 016032 293 DFIDITTGQL--VAEVMDPNITTISPVNKLH---PRDDVLASGS 331 (396)
Q Consensus 293 ~vwd~~~~~~--~~~~~~~~~~~i~~~~~~~---~~~~~l~sg~ 331 (396)
.+++.. |+. +..+... .....++ +|. |++..|+.++
T Consensus 236 ~~~~~~-G~~~~~~~~~~~-~~~p~~~-a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 236 VRIAPD-RSTTIIAQAEQG-VIGSTAV-AFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEECTT-CCEEEEECGGGT-CTTEEEE-EECCSTTTTTEEEEEE
T ss_pred EEECCC-CCEEEEeecccc-cCCceEE-EEecccCCCCEEEEEC
Confidence 999875 554 2223222 1334555 787 7876665544
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=8.9e-05 Score=65.38 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=99.1
Q ss_pred eeEEEEec-CCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEe-------CCCCCEEEEEecCC
Q 016032 67 VNNIRFNP-TNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDI-------NPEKGVVLVADNFG 138 (396)
Q Consensus 67 v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~~g 138 (396)
...|+|.| +.+.++++....+.|++.|+.++............ ......++| ++++..|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~------~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP------TNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSS------CSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccc------cCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 56899998 42444444444577999998887766544332111 123788999 99999777766554
Q ss_pred -------eEEEEeCCC-CCCCc----cceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecC-------CCCCC--
Q 016032 139 -------FLYLVDART-NSRSG----EAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR-------RLEAG-- 197 (396)
Q Consensus 139 -------~i~i~d~~~-~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~-------~~~~~-- 197 (396)
.|.+++... +.... ....... ....++++|.++.++++-..++.|..+|+. +....
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~---~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK---QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES---CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccCC---CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 366676443 12211 1111111 355788899556667777788899999987 33320
Q ss_pred ---------CccccCCCCCceeEEEEcCCCCEEEEE-eCCCcEEEEEcc
Q 016032 198 ---------SSLCDLPHKRVVNSAYFSPSGSKILTT-SQDNRLRIWDSI 236 (396)
Q Consensus 198 ---------~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~ 236 (396)
..+...+.......|+|+|+|+.|+.+ +....|+.++..
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 011222334556899999999965555 456788886654
No 275
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.53 E-value=4.2e-05 Score=64.52 Aligned_cols=199 Identities=13% Similarity=-0.003 Sum_probs=117.0
Q ss_pred CCeEEEEecC-CCCcEEEEEeCCCcEEEeecccceeeeEec--CC-cccceeEEEEec-CCCcEEEEEeC----------
Q 016032 21 RRVTCLEFHP-TNNHILLSGDKKGQVGVWDFYKVSEKIVYG--NI-HSCIVNNIRFNP-TNDGTVYAASS---------- 85 (396)
Q Consensus 21 ~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~-~~~~v~~~~~~~-~~~~~l~s~~~---------- 85 (396)
..+..+++.+ ++ ++++ +...+.|..+|..++....... .+ .......+++.+ + +.+.++-..
T Consensus 80 ~~p~gi~~~~~~g-~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNN-QLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTT-EEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCC-cEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccce
Confidence 3578899998 66 5444 4444558888877553322211 11 123468899999 7 666665432
Q ss_pred -------CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceee
Q 016032 86 -------DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILI 157 (396)
Q Consensus 86 -------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~ 157 (396)
++.|..||..+++.......- .....++++++++.|+++ ...+.|..|++..... ......
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~----------~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~ 225 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKEL----------HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVL 225 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEE----------SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEE
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCC----------ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceE
Confidence 367888888766543222110 115678999999866665 5668999999875321 111111
Q ss_pred ecCCccEEEEEeccCCCCEEEEeeC----------CCcEEEEecCCCCCCCccccCC-C-CCceeEEEEcCCCCEEEEEe
Q 016032 158 HRKGSKVVGLHCNPIQPELLLSCGN----------DHFARIWDIRRLEAGSSLCDLP-H-KRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 158 ~~~~~~i~~~~~~~~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~ 225 (396)
....+ ...+++.+ +++++++... .+.|..+|.. ++....+.... . ...+..+++ .++.++++..
T Consensus 226 ~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~ 301 (322)
T 2fp8_A 226 VKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTL 301 (322)
T ss_dssp EECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECS
T ss_pred EeCCC-CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeec
Confidence 11222 77899999 8887776644 4567888763 22222222111 0 234666766 3566556655
Q ss_pred CCCcEEEEEccc
Q 016032 226 QDNRLRIWDSIF 237 (396)
Q Consensus 226 ~d~~i~iwd~~~ 237 (396)
..+.|..+++..
T Consensus 302 ~~~~i~~~~~~~ 313 (322)
T 2fp8_A 302 FHGSVGILVYDK 313 (322)
T ss_dssp SCSEEEEEEC--
T ss_pred CCCceEEEeccc
Confidence 678899998753
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00062 Score=64.96 Aligned_cols=292 Identities=10% Similarity=0.015 Sum_probs=159.6
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC------CcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN------IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
..|.++...+++ . |..|..+ -+.+||..+......... .....|.++...++ + .|..|+..+-|.+++.
T Consensus 211 ~~i~~i~~d~~g-~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g-~lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 211 NDVRCIYKDTNG-N-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKD-N-KLWIATELNGIMILDL 285 (781)
T ss_dssp SSEEEEEECTTC-C-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTT-S-EEEEEESSSCEEEEET
T ss_pred CceeEEEEcCCC-C-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCC-C-CEEEEeCCCCeEEECC
Confidence 468899888887 4 3444444 588899876543322111 12456889888775 4 5566666456888998
Q ss_pred CCCcccceee-------cCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccce------eeecCC
Q 016032 95 ETGLALSLMN-------VNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAI------LIHRKG 161 (396)
Q Consensus 95 ~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~------~~~~~~ 161 (396)
.++....... ..... ..-....|.++...+++. |.+|+.++-|..++........-.. ......
T Consensus 286 ~~~~~~~~~~~~f~~~~~~~~~--~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 286 QQNQFLLPEQIRFEFIREGDNN--YSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp TCC---------CEEECBCSST--TSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred CCCeeeeeeccccccccCCCCC--CCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 7765432211 10000 001112388888888876 5667777778888877543211100 001122
Q ss_pred ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccc-cCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 162 SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLC-DLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 162 ~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
..|.++...+ ++. |..|+.++-|..||..+........ .......|.++...+++.+. .|+.++-|..++..+++.
T Consensus 363 ~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 363 KVVSSVCDDG-QGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SCEEEEEECT-TSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEE
T ss_pred cceEEEEEcC-CCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcE
Confidence 3688998876 555 5566666678889875422111100 01134678999988887654 466667788998876654
Q ss_pred cCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC----CCCCCcc
Q 016032 241 DSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP----NITTISP 316 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~----~~~~i~~ 316 (396)
...... . ........+..+++ |++.+ |+. +-|..||..+++........ ....+.+
T Consensus 440 ~~~~~~-----~-~~~~~v~~i~~d~~---------g~lwi----gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 440 QIIELE-----K-NELLDVRVFYEDKN---------KKIWI----GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EECCST-----T-TCCCCEEEEEECTT---------SEEEE----EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred EEeccC-----C-CCCCeEEEEEECCC---------CCEEE----EEC-CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 211000 0 01111223333433 44444 333 34888988776543221111 1234555
Q ss_pred eeeeccCCcEEEeecCCcEEEEcCCCcc
Q 016032 317 VNKLHPRDDVLASGSSRSIFIWRPKEKS 344 (396)
Q Consensus 317 ~~~~~~~~~~l~sg~d~~i~iw~~~~~~ 344 (396)
+ ...++|.+.+...++.|..|+..+++
T Consensus 500 i-~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 500 I-AQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp E-EECTTCCEEEEESSSCEEEECTTCCE
T ss_pred E-EEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 5 56778887766554557778876654
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.52 E-value=0.00011 Score=69.58 Aligned_cols=158 Identities=10% Similarity=0.005 Sum_probs=93.6
Q ss_pred ceeEEEEe-cCCCcEEEEE-eCCC----eEEEEECCCC-cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-
Q 016032 66 IVNNIRFN-PTNDGTVYAA-SSDG----TVSCTDLETG-LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF- 137 (396)
Q Consensus 66 ~v~~~~~~-~~~~~~l~s~-~~dg----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~- 137 (396)
.+...+|+ |+ +++|+.+ ..+| +|+++|+.++ +.+... . ......++|+|+++.|+....+
T Consensus 175 ~~~~~~~S~PD-G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~----------~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPE-HDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-V----------SGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTT-TCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-E----------EEECSCCEECSSTTEEEEEEECT
T ss_pred EEeeeEecCCC-CCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-c----------cCceeeEEEecCCCEEEEEEECC
Confidence 67889999 99 7766644 3333 5999999988 532110 0 0113568899999988887664
Q ss_pred ----CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeC---CCcEEEEecCCCCCC---CccccCCCCC
Q 016032 138 ----GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN---DHFARIWDIRRLEAG---SSLCDLPHKR 207 (396)
Q Consensus 138 ----g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~---~~~~~~~~~~ 207 (396)
..|+++++.++......+...........+.|+| ++.+|+..+. ...|+++|+.+.... ..+. .....
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~ 320 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKG 320 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTT
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCC
Confidence 2688888876543222211112223567889999 8988776552 446888898764211 1121 12344
Q ss_pred ceeEEEEcCCCCEEEEEeCC--C--cEEEEEccc
Q 016032 208 VVNSAYFSPSGSKILTTSQD--N--RLRIWDSIF 237 (396)
Q Consensus 208 ~i~~~~~~~~~~~l~~~~~d--~--~i~iwd~~~ 237 (396)
...++.|+..+.+++....+ + .|..+++.+
T Consensus 321 ~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 321 VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 55566655444444444443 2 466666653
No 278
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.49 E-value=0.00014 Score=57.40 Aligned_cols=158 Identities=15% Similarity=0.086 Sum_probs=100.2
Q ss_pred ccceeEEEEecCCCcEEEEEeCC--CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEE
Q 016032 64 SCIVNNIRFNPTNDGTVYAASSD--GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLY 141 (396)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 141 (396)
..-...+.|++ +.++.+.+.. ..|+.+|+.+++.+..+..+...+ -..+++. .++.....-.++.+.
T Consensus 20 ~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f--------geGi~~~-~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 20 TAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF--------GAGIVAW-RDRLIQLTWRNHEGF 88 (243)
T ss_dssp TCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC--------EEEEEEE-TTEEEEEESSSSEEE
T ss_pred ccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc--------eeEEEEe-CCEEEEEEeeCCEEE
Confidence 34567899986 4666666665 489999999999998887765432 2233333 234444456788999
Q ss_pred EEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCCCC---CceeEEEEcCCC
Q 016032 142 LVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHK---RVVNSAYFSPSG 218 (396)
Q Consensus 142 i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~---~~i~~~~~~~~~ 218 (396)
++|..+.+....... ... -..++ + ++..|+.+..++.|.++|..+.+....+..-.+. ..++.+.|. +|
T Consensus 89 v~D~~tl~~~~ti~~-~~~---Gwglt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 89 VYDLATLTPRARFRY-PGE---GWALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp EEETTTTEEEEEEEC-SSC---CCEEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEECCcCcEEEEEeC-CCC---ceEEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 999998776654322 112 23444 3 4555555556889999999876654444432221 234566665 56
Q ss_pred CEEEEEeCCCcEEEEEcccccc
Q 016032 219 SKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 219 ~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
++.+..-.+..|.+.|..+++.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBE
T ss_pred EEEEEECCCCeEEEEECCCCCE
Confidence 5554444577888888877764
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.44 E-value=0.00013 Score=64.08 Aligned_cols=200 Identities=11% Similarity=0.113 Sum_probs=114.6
Q ss_pred CCeEEEEecCC--CCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC---Ce-EEEEEC
Q 016032 21 RRVTCLEFHPT--NNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD---GT-VSCTDL 94 (396)
Q Consensus 21 ~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g~-v~iwd~ 94 (396)
.....|+|+|+ +.++++ +...+.|+.+|..++....... .......++|+++ ++++++.... .. +...+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~d-G~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLN-GDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTT-CCEEEEECCSCTTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCC-CCEEEEcCCCCcccceEEEEEC
Confidence 34678999985 325444 4444889999997766554432 4456899999999 6644444321 11 323332
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCC
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQ 173 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 173 (396)
. +......... .......++++| ++.++++-..++.|+.+|..++......... ........++++| +
T Consensus 215 ~-~~~~~~~~~~--------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~dp-d 283 (433)
T 4hw6_A 215 A-SGFTERLSLC--------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWHP-T 283 (433)
T ss_dssp G-GTTCCEEEEE--------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEECT-T
T ss_pred C-CCeecccccc--------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEeC-C
Confidence 2 1111000000 011256788999 6666666667789999998765431121111 1112234799999 8
Q ss_pred CC-EEEEeeCCCcEEEEecCC--CCCC--Ccccc-CC------------CCCceeEEEE---------cCCCCEEEEEeC
Q 016032 174 PE-LLLSCGNDHFARIWDIRR--LEAG--SSLCD-LP------------HKRVVNSAYF---------SPSGSKILTTSQ 226 (396)
Q Consensus 174 ~~-~l~~~~~d~~i~~wd~~~--~~~~--~~~~~-~~------------~~~~i~~~~~---------~~~~~~l~~~~~ 226 (396)
++ ++++-...+.|+.++... .... ..+.. .+ .-.....+++ .+++.++++-..
T Consensus 284 G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 284 GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 87 555555678899988642 1111 01100 00 1124677999 677777776667
Q ss_pred CCcEEEEEc
Q 016032 227 DNRLRIWDS 235 (396)
Q Consensus 227 d~~i~iwd~ 235 (396)
.+.|+.++.
T Consensus 364 n~~I~~~~~ 372 (433)
T 4hw6_A 364 SHTVRVLTP 372 (433)
T ss_dssp TTEEEEECT
T ss_pred CCEEEEECC
Confidence 788999885
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.43 E-value=0.00022 Score=59.80 Aligned_cols=204 Identities=10% Similarity=0.028 Sum_probs=126.3
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.+..++|.+.+++++.+-...+.|..+++........+....-.....+++.+.++.++++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 46789999866567777667788999998765322211111234567889987635666666677899999987543322
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEE
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLS 179 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 179 (396)
.+.... .....+++.|.+..|+.+.. .+.|...++..... .. .....-.....|+++|..+.++++
T Consensus 116 l~~~~~---------~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~--~~~~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 116 LFWQEL---------DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FI--IINSEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp EECSSC---------SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EE--EECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEeCCC---------CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EE--EEECCCCCccEEEEeccCCEEEEE
Confidence 221111 12688999987766666653 57888888764321 11 111222357899999844555555
Q ss_pred eeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 180 CGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 180 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
-+..+.|..+|+.... ...+.. ........+++.. +.++++-...+.|..++..+|+.
T Consensus 184 D~~~~~I~~~d~dG~~-~~~~~~-~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTN-RQAVVK-GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp ETTTTEEEEEETTSCS-CEEEEC-SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred ECCCCEEEEEcCCCCc-eEEEec-CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 5667889999986322 222211 2234466777753 34555555678899999877764
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.40 E-value=0.00079 Score=58.46 Aligned_cols=180 Identities=10% Similarity=0.079 Sum_probs=109.1
Q ss_pred CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc----ccceeecCCCCCCCCCcce
Q 016032 42 KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL----ALSLMNVNPNGWHGPRTWR 117 (396)
Q Consensus 42 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~ 117 (396)
...|+..++.......... ....+..|+|++..+.++++-...+.|+.+++.... ....+.... .
T Consensus 91 ~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~---------~ 159 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI---------Q 159 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC---------S
T ss_pred cceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC---------C
Confidence 4689999988765544442 456788999998734455555567889999887532 111111111 1
Q ss_pred eeeEEEeCCCCCEE-EEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeC-CCcEEEEecCCCC
Q 016032 118 MLYGMDINPEKGVV-LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGN-DHFARIWDIRRLE 195 (396)
Q Consensus 118 ~v~~~~~~~~~~~l-~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~ 195 (396)
....+++.+.+..| ++-...+.|.+.++...... . ...........|++.|..+.++++-.. .+.|...++....
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~-~--l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-T--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE-E--EEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceE-E--EEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 26788888754444 44456788999998754321 1 122233357899999944444444423 4678888875322
Q ss_pred CCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccc
Q 016032 196 AGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIF 237 (396)
Q Consensus 196 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 237 (396)
. ..+. ...-...+.|++++++..|+.+. ..+.|..+|+..
T Consensus 237 ~-~~~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 237 I-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp C-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred c-EEEE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 1 1111 12235678999999777776665 457899999864
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.40 E-value=0.00055 Score=57.37 Aligned_cols=247 Identities=9% Similarity=-0.034 Sum_probs=135.4
Q ss_pred CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeE
Q 016032 42 KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYG 121 (396)
Q Consensus 42 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 121 (396)
...|+..++................+..++|.+..+.++++-...+.|..+++..+.....+..... .....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--------~~p~g 83 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--------LSPDG 83 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--------SCCCE
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--------CCccE
Confidence 3579999998753111111113345778999987355556656678899999876643221111100 11567
Q ss_pred EEeCCCCCEE-EEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCCCCc
Q 016032 122 MDINPEKGVV-LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEAGSS 199 (396)
Q Consensus 122 ~~~~~~~~~l-~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~ 199 (396)
+++.+.+..| ++-...+.|.++++...... . ...........+++.|..+.++++-. ..+.|...++.-.. ...
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~-l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRK--V-LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCE--E-EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEE--E-EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 8888755544 44456679999998753221 1 11223346789999983344444432 35788888875321 111
Q ss_pred cccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEee
Q 016032 200 LCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGR 278 (396)
Q Consensus 200 ~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 278 (396)
+.. ..-...+.|+++|++..|+.+. ..+.|..+|+..... ..+.. .....|..++...+ +-
T Consensus 160 ~~~-~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-----~~~~~---~~~~~P~glav~~~---------~l 221 (318)
T 3sov_A 160 IIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-----QAVVK---GSLPHPFALTLFED---------IL 221 (318)
T ss_dssp EEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEC---SCCSCEEEEEEETT---------EE
T ss_pred EEE-CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-----EEEec---CCCCCceEEEEeCC---------EE
Confidence 211 1234578999999766666554 467899999864221 11111 01122333333221 22
Q ss_pred eeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccC
Q 016032 279 YISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPR 323 (396)
Q Consensus 279 ~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 323 (396)
|.+ -...+.|..++..+|+....+...- .....+..+++.
T Consensus 222 ywt----d~~~~~V~~~~~~~G~~~~~i~~~~-~~P~~i~v~~~~ 261 (318)
T 3sov_A 222 YWT----DWSTHSILACNKYTGEGLREIHSDI-FSPMDIHAFSQQ 261 (318)
T ss_dssp EEE----ETTTTEEEEEETTTCCSCEEEECCC-SSCCCEEEECGG
T ss_pred EEE----ecCCCeEEEEECCCCCceEEEeCCC-CCCcEEEEeccc
Confidence 222 3455678888988887666554332 223334345554
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.38 E-value=0.00052 Score=64.78 Aligned_cols=209 Identities=13% Similarity=0.012 Sum_probs=124.4
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccce---eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECC
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLE 95 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (396)
....+..|+|.+.+.+++++-...+.|+.+++.... ....+..........|++.+.++.++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345677899998665666776677889988887531 11222232345677899988744566666678899999988
Q ss_pred CCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCC
Q 016032 96 TGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQ 173 (396)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 173 (396)
.......+.... .....|++.|....|+.+.. .+.|...++...... . .....-.....|++.+..
T Consensus 502 G~~~~~l~~~~l---------~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-~--lv~~~l~~P~GLavD~~~ 569 (791)
T 3m0c_C 502 GVKRKTLFRENG---------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-S--LVTENIQWPNGITLDLLS 569 (791)
T ss_dssp SSSEEEEEECTT---------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-E--EECSSCSCEEEEEEETTT
T ss_pred CCeEEEEEeCCC---------CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-E--EEeCCCCCceEEEEecCC
Confidence 554333322111 12788999998766666653 267888888653221 1 112222368899999845
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 174 PELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 174 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
+.++++-...+.|...++........+.....-.....|++.. +.++++-...+.|...+..+|+.
T Consensus 570 ~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 570 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCC
T ss_pred CeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcc
Confidence 5555555566789999986432222221111222345666643 33444444567888888777654
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.37 E-value=0.00022 Score=58.88 Aligned_cols=217 Identities=8% Similarity=-0.020 Sum_probs=129.6
Q ss_pred eccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCC----c--ccceeEEEE---ecCCCcEEEEEe--
Q 016032 16 IRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI----H--SCIVNNIRF---NPTNDGTVYAAS-- 84 (396)
Q Consensus 16 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~l~s~~-- 84 (396)
+....---.+++|++...+++++.-..++|..|+...+........+ . ...+..|.| .|+ +.++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~ 86 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNA 86 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEET
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccc
Confidence 33444445678998866566666668999999999855433332221 1 124689999 587 77776543
Q ss_pred -----------CCCeEEEEECC---CCcccceeecCCCCCC----CCCcceeeeEEEeCCCCCEEEEEecC-CeEEEEeC
Q 016032 85 -----------SDGTVSCTDLE---TGLALSLMNVNPNGWH----GPRTWRMLYGMDINPEKGVVLVADNF-GFLYLVDA 145 (396)
Q Consensus 85 -----------~dg~v~iwd~~---~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~-g~i~i~d~ 145 (396)
.+..|..+|+. +++.+....+...... ..........++..++|+..++++.. +.|..++.
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 26789999999 7877766553211000 00011238899999999999999888 88888877
Q ss_pred CCCCCCcccee-e--ecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC--C---CCCceeEE-EEcC
Q 016032 146 RTNSRSGEAIL-I--HRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL--P---HKRVVNSA-YFSP 216 (396)
Q Consensus 146 ~~~~~~~~~~~-~--~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~---~~~~i~~~-~~~~ 216 (396)
...... .... . .......+.|+++| +++.|++....+.|..+|++..... .+... + .-.....| ..-.
T Consensus 167 dG~~~~-~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 167 DGKTVS-TFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp TSCCEE-EEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEEEEEEEE
T ss_pred CCCEEe-eeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCccccccccc
Confidence 653211 1100 0 11112367999999 8888887766999999998742110 12110 1 11123333 2233
Q ss_pred CCCEE-EEEeCCCcEEEEEcc
Q 016032 217 SGSKI-LTTSQDNRLRIWDSI 236 (396)
Q Consensus 217 ~~~~l-~~~~~d~~i~iwd~~ 236 (396)
+|+.| ++....+.+.+.+.+
T Consensus 244 ~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSS
T ss_pred CCEEEEEEcCCCCEEEEECCC
Confidence 77774 444455555555544
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=0.00029 Score=61.82 Aligned_cols=153 Identities=15% Similarity=0.165 Sum_probs=94.8
Q ss_pred CeEEEEecC-CCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC-CC----eEEEEECC
Q 016032 22 RVTCLEFHP-TNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS-DG----TVSCTDLE 95 (396)
Q Consensus 22 ~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg----~v~iwd~~ 95 (396)
....|+++| ++.. |..+...+.|+.+|+.+........ .......|+|+++ ++.|+.+.. ++ .+...+ .
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~-G~~lyvad~~~~~~~~~v~~~~-~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHE-ADSMIITNDQNNNDRPNNYILT-R 212 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTT-SSEEEEEECCSCTTSEEEEEEE-G
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCC-CCEEEEEeCCCCcccceEEEEe-C
Confidence 457899998 3434 4444444789999988765444432 4456889999999 775555543 22 233344 3
Q ss_pred CCccc--ceeecCCCCCCCCCcceeeeEEEeCC-CCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccC
Q 016032 96 TGLAL--SLMNVNPNGWHGPRTWRMLYGMDINP-EKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPI 172 (396)
Q Consensus 96 ~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 172 (396)
.+... ..+.. ......++++| ++.++++-...+.|+.++....... .. ...........++++|
T Consensus 213 ~g~~~~~~~l~~----------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~-~~~~~~~~P~gia~~p- 279 (430)
T 3tc9_A 213 ESGFKVITELTK----------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PL-FTIQDSGWEFHIQFHP- 279 (430)
T ss_dssp GGTSCSEEEEEE----------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EE-EECSSSSCCEEEEECT-
T ss_pred CCceeeeeeecc----------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-EEcCCCCcceeEEEcC-
Confidence 33322 11110 01267788999 6776666667789999998764321 11 1111223477899999
Q ss_pred CCC-EEEEeeCCCcEEEEecC
Q 016032 173 QPE-LLLSCGNDHFARIWDIR 192 (396)
Q Consensus 173 ~~~-~l~~~~~d~~i~~wd~~ 192 (396)
+++ ++++-...+.|..++..
T Consensus 280 dG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 280 SGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCC
Confidence 888 55555667889998765
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.34 E-value=0.00088 Score=56.15 Aligned_cols=180 Identities=10% Similarity=0.065 Sum_probs=108.0
Q ss_pred CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC---cccceeecCCCCCCCCCcceee
Q 016032 43 GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG---LALSLMNVNPNGWHGPRTWRML 119 (396)
Q Consensus 43 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~v 119 (396)
..|+..|+.+......+. ....+..++|.+.++..+++-...+.|..+++... .....+. . ... ...
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~-~~~------~~p 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-S-RDI------QAP 79 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-C-SSC------SCC
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-e-CCC------CCc
Confidence 469999998766554442 34567899999873455556566789999998761 2212111 1 000 125
Q ss_pred eEEEeCCCCCEEE-EEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC-CcEEEEecCCCCCC
Q 016032 120 YGMDINPEKGVVL-VADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND-HFARIWDIRRLEAG 197 (396)
Q Consensus 120 ~~~~~~~~~~~l~-~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~~~~ 197 (396)
..+++.+.+..|+ +-...+.|.++++..... .. ...........+++.|..+.++++.... +.|...++... ..
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~--~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~ 155 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DI 155 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EE--EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-Ce
Confidence 6788887555554 446678999999875321 11 1122233678999998444444554333 68888887532 11
Q ss_pred CccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccc
Q 016032 198 SSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIF 237 (396)
Q Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 237 (396)
..+.. ..-...+.++++|++..|+.+. ..+.|..+|+..
T Consensus 156 ~~~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 156 YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 11211 2234678999999777766555 457899999874
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.31 E-value=7.1e-06 Score=76.69 Aligned_cols=206 Identities=13% Similarity=0.026 Sum_probs=119.6
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeeccc----ceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYK----VSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
..+..|+|++.+..++++-...+.|+.+++.+ ......+ .........|++.+.++.++++-...+.|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 34567899987655555555668899998875 2222222 112234567888865355556656678899999875
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
......+.... .....+++.|.+.+|+.+.. .+.|..+++...... . ...........|+++|..+
T Consensus 485 ~~~~~l~~~~~---------~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~--~-l~~~~l~~PnGlavd~~~~ 552 (699)
T 1n7d_A 485 VKRKTLFREQG---------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--S-LVTENIQWPNGITLDLLSG 552 (699)
T ss_dssp CCEEEECCCSS---------CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC--E-ESCSSCSSCCCEEECTTTC
T ss_pred CceEEEEeCCC---------CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee--E-EEeCCCCCccEEEEeccCC
Confidence 54332221111 12567889987665555543 267888777543211 1 1111222467899998456
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccccccc
Q 016032 175 ELLLSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLD 241 (396)
Q Consensus 175 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 241 (396)
.++++-+..+.|..+++..... ..+... ........|++..+ .++++....+.|..++..+++..
T Consensus 553 ~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 553 RLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp CEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred EEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence 6666666778899999864222 222111 11223445666544 44555556788999998777654
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.25 E-value=6.9e-05 Score=69.88 Aligned_cols=210 Identities=10% Similarity=-0.019 Sum_probs=112.3
Q ss_pred eEEEEecCCCCcEEEEEeC-CCcEEEeecccceeeeEecCCccc-ceeEEEEecCCCcEEEEEe-CC-----CeEEEEEC
Q 016032 23 VTCLEFHPTNNHILLSGDK-KGQVGVWDFYKVSEKIVYGNIHSC-IVNNIRFNPTNDGTVYAAS-SD-----GTVSCTDL 94 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~-~d-----g~v~iwd~ 94 (396)
..++++.+++ ++++.|+. +..+.+||..+..-.... ..+.. .-.+++..++ +.+++.|+ .+ ..+.+||.
T Consensus 245 ~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~d-g~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 245 CPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSD-GRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTT-SCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECC-CCCccccccceEEecC-CeEEEEeCcccCCcccccceEeCC
Confidence 3456777888 68888884 558999999876432221 11211 1234555667 78888888 34 56899999
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC---------CeEEEEeCCCCCCCccceeeec------
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF---------GFLYLVDARTNSRSGEAILIHR------ 159 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------g~i~i~d~~~~~~~~~~~~~~~------ 159 (396)
.+.+....-........... ....+..++..++.++.+ ..+..||..+............
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~-----~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTAD-----KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCC-----TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred CCCcceeCCCcccccccccc-----ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 87654322000000000000 001123345555555444 3567888876543211100000
Q ss_pred CCccEEEEEeccCCCCEEEEeeCCC-----------cEEEEecCCCCCCCcc-ccCCCCCceeEEEEcCCCCEEEEEeCC
Q 016032 160 KGSKVVGLHCNPIQPELLLSCGNDH-----------FARIWDIRRLEAGSSL-CDLPHKRVVNSAYFSPSGSKILTTSQD 227 (396)
Q Consensus 160 ~~~~i~~~~~~~~~~~~l~~~~~d~-----------~i~~wd~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d 227 (396)
....-.++.+...++.+++.|+.++ .|.+||..+..-.... ..+.....-.+++..|++++++.|+.+
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 0111234444333678888887542 6778887653321111 112222223455677899999999864
Q ss_pred -----------CcEEEEEcccccc
Q 016032 228 -----------NRLRIWDSIFGNL 240 (396)
Q Consensus 228 -----------~~i~iwd~~~~~~ 240 (396)
..+.+||..+.+.
T Consensus 477 ~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 477 RGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp BCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred cCcCcCCCCcccceEEEcCCCCce
Confidence 4688999877553
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.24 E-value=0.0007 Score=56.47 Aligned_cols=204 Identities=16% Similarity=0.217 Sum_probs=118.9
Q ss_pred EEEecCCC--CcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecC---CCc---EEEEEe-C--CCeEEEEE
Q 016032 25 CLEFHPTN--NHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPT---NDG---TVYAAS-S--DGTVSCTD 93 (396)
Q Consensus 25 ~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~---~l~s~~-~--dg~v~iwd 93 (396)
++-.+|.. ..+++.....+-+.+||+ .++.+..+. .+.++.+..-|. ++. ++++.. . +++|.+|+
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~ 105 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYA 105 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEE
Confidence 34445542 135666667788999999 566666652 255677766653 011 233333 3 57899997
Q ss_pred CC--CCcccceeecCCCCCCCCCcceeeeEEEe--CCC-CC-EEEEEecCCeEEEEeCCC---CCCCccceeeecCCccE
Q 016032 94 LE--TGLALSLMNVNPNGWHGPRTWRMLYGMDI--NPE-KG-VVLVADNFGFLYLVDART---NSRSGEAILIHRKGSKV 164 (396)
Q Consensus 94 ~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~-~l~~~~~~g~i~i~d~~~---~~~~~~~~~~~~~~~~i 164 (396)
+. ++. +..+.....+.. .....+..+++ +|. +. ++++...+|.+..|++.. +....+.......++.+
T Consensus 106 iDp~~~~-l~~i~~~~~pv~--t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~ 182 (355)
T 3amr_A 106 IDGKNGT-LQSMTDPDHPIA--TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT 182 (355)
T ss_dssp ECTTTCC-EEECSCTTSCEE--CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE
T ss_pred ECCCCCc-eeeccccccCcC--CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc
Confidence 74 332 332211000000 00022666777 775 43 688888889999998843 22233333334445578
Q ss_pred EEEEeccCCCCEEEEeeCCCcEEEEecCCCC--CCCccccC--C-CCCceeEEEEc--CCCC-EEEEEe-CCCcEEEEEc
Q 016032 165 VGLHCNPIQPELLLSCGNDHFARIWDIRRLE--AGSSLCDL--P-HKRVVNSAYFS--PSGS-KILTTS-QDNRLRIWDS 235 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~--~-~~~~i~~~~~~--~~~~-~l~~~~-~d~~i~iwd~ 235 (396)
-.+...+ ....|+.+-++.-|..++.+-.. ....+... + ....+..|++- ++++ +|++++ .++++.+||.
T Consensus 183 EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 183 EGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred ceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 8889988 77888888888777777754221 12223222 1 22468888884 4555 555555 6779999998
Q ss_pred c
Q 016032 236 I 236 (396)
Q Consensus 236 ~ 236 (396)
.
T Consensus 262 ~ 262 (355)
T 3amr_A 262 Q 262 (355)
T ss_dssp S
T ss_pred C
Confidence 5
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.23 E-value=0.0038 Score=59.00 Aligned_cols=198 Identities=11% Similarity=0.099 Sum_probs=115.5
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc---
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL--- 98 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--- 98 (396)
.-+|.+..+.. +|+... ...|+..++.......... ....+..|+|.+..+.++++-...+.|+.+++....
T Consensus 386 ~~~C~~~~~~p--~Ll~an-~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~ 460 (791)
T 3m0c_C 386 TKACKAVGSIA--YLFFTN-RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS 460 (791)
T ss_dssp CCCCEETTSCC--EEEEEC-BSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------
T ss_pred Cceeeeccccc--cccccc-ccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc
Confidence 33455544432 333333 3568888887655444442 445678999998735555666667889999887532
Q ss_pred -ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCE
Q 016032 99 -ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 176 (396)
....+.... .....|++.+.+..|+.+ ...+.|.+.++...... . ...........|++.|..+.+
T Consensus 461 ~~~~vi~~~l---------~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-~--l~~~~l~~P~gIaVDp~~g~L 528 (791)
T 3m0c_C 461 SYDTVISRDI---------QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-T--LFRENGSKPRAIVVDPVHGFM 528 (791)
T ss_dssp -CEEEECSSC---------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-E--EEECTTCCEEEEEEETTTTEE
T ss_pred ceeEEEecCC---------CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-E--EEeCCCCCcceEEEecCCCCE
Confidence 111111110 126678888877555554 56689999998753321 1 122233358899999944555
Q ss_pred EEEeeCC-CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccc
Q 016032 177 LLSCGND-HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFG 238 (396)
Q Consensus 177 l~~~~~d-~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 238 (396)
+++-... +.|...++..... ..+. ...-...+.|++++.+..|+.+. ..+.|..+++...
T Consensus 529 YwtD~g~~~~I~~~~~dG~~~-~~lv-~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 529 YWTDWGTPAKIKKGGLNGVDI-YSLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EEEECSSSCEEEEEETTSCCE-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEecCCCCCeEEEEecCCCce-EEEE-eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 5554333 6788888753222 1111 12335688999998766676664 4567888888643
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0014 Score=57.94 Aligned_cols=205 Identities=12% Similarity=0.086 Sum_probs=117.0
Q ss_pred CeEEEEecCC-CCcEEEEEeCCCcEEEeecccceeeeEecCC--cccceeEEEE-------ecCCCcEEEEEeCCC----
Q 016032 22 RVTCLEFHPT-NNHILLSGDKKGQVGVWDFYKVSEKIVYGNI--HSCIVNNIRF-------NPTNDGTVYAASSDG---- 87 (396)
Q Consensus 22 ~v~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~~l~s~~~dg---- 87 (396)
....|+|+|. +.+++++-...+.|++.|+.++........+ .......|+| +++ +..|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~-G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADE-AEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCT-TCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCC-CCEEEEEeCCCCCcc
Confidence 3568999983 4456666555567889998876655544221 2235899999 998 77566655443
Q ss_pred ---eEEEEECCC-Cccc-----ceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCC-------CCCC
Q 016032 88 ---TVSCTDLET-GLAL-----SLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDAR-------TNSR 150 (396)
Q Consensus 88 ---~v~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~-------~~~~ 150 (396)
.|.+.+... +... ..+. .......++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~----------~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~ 288 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIA----------AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS 288 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEE----------EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC
T ss_pred cCceEEEEecCCCCceeecccceeec----------cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCcee
Confidence 255665333 2221 1111 0112567889995 5555566677889999997 4433
Q ss_pred C----------ccceeeecCCccEEEEEeccCCCCE-EEEeeCCCcEEEEecCCCC--CC--Ccccc----CC-------
Q 016032 151 S----------GEAILIHRKGSKVVGLHCNPIQPEL-LLSCGNDHFARIWDIRRLE--AG--SSLCD----LP------- 204 (396)
Q Consensus 151 ~----------~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~--~~--~~~~~----~~------- 204 (396)
. ...+...........++|+| +++. +++-+..+.|+.++..... .. ..+.. .+
T Consensus 289 ~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~ 367 (496)
T 3kya_A 289 WDPIVKNNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT 367 (496)
T ss_dssp CCCBGGGCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG
T ss_pred ecccccccccccceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc
Confidence 0 00111112233567999999 8884 5555567788886653211 00 01100 00
Q ss_pred --CCCcee-EEEEc-------CCCCEEEEEeCCCcEEEEEccccc
Q 016032 205 --HKRVVN-SAYFS-------PSGSKILTTSQDNRLRIWDSIFGN 239 (396)
Q Consensus 205 --~~~~i~-~~~~~-------~~~~~l~~~~~d~~i~iwd~~~~~ 239 (396)
.-.... .++.. +++.++++=.....|+.++. +|.
T Consensus 368 ~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~ 411 (496)
T 3kya_A 368 EARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI 411 (496)
T ss_dssp GCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB
T ss_pred ccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC
Confidence 011234 45554 45666666666788999883 443
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.17 E-value=6.6e-05 Score=70.20 Aligned_cols=231 Identities=13% Similarity=0.108 Sum_probs=123.1
Q ss_pred CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE-eCCCeEEEEECCC----CcccceeecCCCCCCCCCcc
Q 016032 42 KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA-SSDGTVSCTDLET----GLALSLMNVNPNGWHGPRTW 116 (396)
Q Consensus 42 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~ 116 (396)
.+.|+..++.+......+. ....+..|+|.+. ...|+.+ ...+.|+.+++.. ......+.. ..
T Consensus 385 ~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~-~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~---------~~ 452 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------DI 452 (699)
T ss_dssp TTC-CEECTTSCCEECCSC--CCTTCCCCEEETT-TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS---------CC
T ss_pred ccceEEEeCCCCcceeeec--cCcceEEEccccc-cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC---------CC
Confidence 3578888887655443332 3345678999987 4455444 4567899999875 121111110 00
Q ss_pred eeeeEEEeCCCCCEE-EEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC-CcEEEEecCCC
Q 016032 117 RMLYGMDINPEKGVV-LVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND-HFARIWDIRRL 194 (396)
Q Consensus 117 ~~v~~~~~~~~~~~l-~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-~~i~~wd~~~~ 194 (396)
.....+++.+.+..| ++-...+.|.++++...... . ...........|++.|..+.++++-... +.|..+++...
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~--l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-T--LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-E--ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE-E--EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 125667888654444 44455678999998754221 1 1111122467888998444445444333 67888877532
Q ss_pred CCCCccccCCCCCceeEEEEcCCCCEEEEE-eCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCce
Q 016032 195 EAGSSLCDLPHKRVVNSAYFSPSGSKILTT-SQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESL 273 (396)
Q Consensus 195 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (396)
.. ..+.. ..-...+.|+|+|++..|+.+ ...+.|..+++...... .+.... .....++.+++..+
T Consensus 530 ~~-~~l~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~----~~~~~~--~~~~~P~glavd~~------ 595 (699)
T 1n7d_A 530 DI-YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK----TILEDE--KRLAHPFSLAVFED------ 595 (699)
T ss_dssp CC-CEESC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE----EECCCS--SSCSSCCCCEEETT------
T ss_pred Ce-eEEEe-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE----EEEecC--CcCCCceEeEEECC------
Confidence 21 11211 123456789999976555544 45678999998642211 111000 00111122222211
Q ss_pred eeEeeeeeeecccccccceEEEEcCccchhhhhcC
Q 016032 274 AVIGRYISENYNGAALHPIDFIDITTGQLVAEVMD 308 (396)
Q Consensus 274 ~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~ 308 (396)
.-|++ ....+.|..++..+|+.+..+..
T Consensus 596 ---~lywt----d~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 596 ---KVFWT----DIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp ---EEEEE----CSTTTCEEEEETTTEEEEECCCT
T ss_pred ---EEEEE----eCCCCeEEEEEccCCCceEEeec
Confidence 22222 35567899999888887766643
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.14 E-value=0.0048 Score=56.76 Aligned_cols=206 Identities=10% Similarity=0.021 Sum_probs=121.0
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA 99 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (396)
...+..++|++.++.++.+-...+.|..+++........+....-.....+++.+.++.++++-...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 34577899998775666665567789888887653222222223356889999987455666666788999999875443
Q ss_pred cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEE
Q 016032 100 LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELL 177 (396)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 177 (396)
...+.... .....+++.|.+..|+.+.. .+.|...++...... . ...........|++.+..+.++
T Consensus 119 ~~l~~~~l---------~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~-~--l~~~~~~~P~Glald~~~~~LY 186 (619)
T 3s94_A 119 KVLFWQEL---------DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-I--IINSEIYWPNGLTLDYEEQKLY 186 (619)
T ss_dssp EEEECSSC---------SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E--EECSSCSSEEEEEEETTTTEEE
T ss_pred EEEEeCCC---------CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE-E--EEeCCCCCCcEEEEEccCCEEE
Confidence 22221111 12678999998666666653 467777776543221 1 1112233678999998445555
Q ss_pred EEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 178 LSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 178 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
++-...+.|...|+........+. ........|++..+ .++++-...+.|...|..+++.
T Consensus 187 ~aD~~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 187 WADAKLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred EEeCCCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 565667789999886432222211 11222356777655 3444444577899999887764
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.07 E-value=0.006 Score=56.21 Aligned_cols=201 Identities=9% Similarity=0.031 Sum_probs=127.0
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
..+..|+|++.+++++.+-..++.|..+++........+. ........|++.+.+++++++-...+.|.+.++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~-~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE-FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 4577999999776767777778899999987654443332 222457789998774555566666789999998754332
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+.... .....+++.|....|+.+.. .+.|...++...... .+ .........|++.+..+.+++
T Consensus 116 ~l~~~~l---------~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l---~~~~~~P~GlalD~~~~~LY~ 182 (628)
T 4a0p_A 116 VLVWKDL---------DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TL---VPNVGRANGLTIDYAKRRLYW 182 (628)
T ss_dssp EEECSSC---------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE---ECSCSSEEEEEEETTTTEEEE
T ss_pred EEEeCCC---------CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EE---ECCCCCcceEEEccccCEEEE
Confidence 2221111 22789999997666666653 567888887654321 11 123346889999983444555
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccccc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGN 239 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 239 (396)
+-...+.|..+|+..... ..+. ........+++.. +.++++-...+.|...|..+++
T Consensus 183 aD~~~~~I~~~d~dG~~~-~v~~--~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 183 TDLDTNLIESSNMLGLNR-EVIA--DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EETTTTEEEEEETTSCSC-EEEE--ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCEEEEEcCCCCce-EEee--ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 555678899999864332 2221 1223456777764 4444444457888888877665
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0076 Score=55.55 Aligned_cols=183 Identities=10% Similarity=0.057 Sum_probs=113.2
Q ss_pred CCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeee
Q 016032 41 KKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLY 120 (396)
Q Consensus 41 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 120 (396)
..+.|+..++.+......+....-..+..|+|++..+..+++-..++.|..+++........+.... ..+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~---------~~P~ 83 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL---------DYPE 83 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCC
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC---------CCcc
Confidence 4568999999865443333222335688999999845555565668899999987654333332111 1266
Q ss_pred EEEeCCCCCEEEEE-ecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEe-eCCCcEEEEecCCCCCCC
Q 016032 121 GMDINPEKGVVLVA-DNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC-GNDHFARIWDIRRLEAGS 198 (396)
Q Consensus 121 ~~~~~~~~~~l~~~-~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~ 198 (396)
.+++.+.+..|+.+ ...+.|.+.++..... .. ...........|++.|..+.++++- +..+.|...++..... .
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~--~~-l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~ 159 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHR--QV-LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-T 159 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTC--EE-EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-E
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcE--EE-EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-E
Confidence 78888765555544 5567899999875432 11 1112333578999998445555543 2256788787753222 2
Q ss_pred ccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEcccc
Q 016032 199 SLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFG 238 (396)
Q Consensus 199 ~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 238 (396)
.+. ..-...+.|++++++..|+.+. ..+.|..+|+...
T Consensus 160 ~l~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 160 TLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEE--CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 221 2345678999999777776665 4678999998653
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.02 E-value=0.013 Score=57.94 Aligned_cols=190 Identities=12% Similarity=0.029 Sum_probs=97.5
Q ss_pred cCCeEEEEecCCC-----CcEEEEEeC-CCcEEEeecccceeeeEecCCcccceeEEEEec-CCCcEEEEEeCCCeEEEE
Q 016032 20 SRRVTCLEFHPTN-----NHILLSGDK-KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNP-TNDGTVYAASSDGTVSCT 92 (396)
Q Consensus 20 ~~~v~~~~~~~~~-----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~v~iw 92 (396)
.+.|.|+++.|.. ..+++.|.. |++++|+++...+......-+......++.+.. .+..+|..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 4679999998642 258899986 999999999876554433211222344444432 114678889999998766
Q ss_pred ECC--CCcccce--eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE-EE
Q 016032 93 DLE--TGLALSL--MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV-GL 167 (396)
Q Consensus 93 d~~--~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~-~~ 167 (396)
.+. +|+.... ...... ++.-..+...+..-+.+..+....++.-+. ... ...-....+. ..
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~---------pv~L~~~~~~~~~~V~a~s~rp~liy~~~~-~l~----~s~l~~~~v~~~~ 698 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQ---------PTVLRTFRSLSTTNVFACSDRPTVIYSSNH-KLV----FSNVNLKEVNYMC 698 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSS---------CCEEEEEESSSCEEEEEESSSCEEEEESSS-SEE----EEEBSSSCCCEEE
T ss_pred EEcCCCCccccceeEEcCCC---------ceEEEEEeeCCceeEEEECCCCEEEEEcCC-ceE----EeccChHHhceEe
Confidence 654 3433221 111111 122222222333333333344433443221 111 1011111222 22
Q ss_pred EeccC-CCCEEEEeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe
Q 016032 168 HCNPI-QPELLLSCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 168 ~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (396)
.|+.. .++-++..+ ++.++|..+...+ ...+..+.-...+..++++|..+.++++.
T Consensus 699 ~F~se~~~~g~v~~~-~~~LrI~~i~~~~-~~~~~~ipL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 699 PLNSDGYPDSLALAN-NSTLTIGTIDEIQ-KLHIRTVPLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EECCSSSTTEEEEEC-SSCEEEEEECCSS-SEEEEEEECSSEEEEEEEEGGGTEEEEEE
T ss_pred ccCcccCCCcEEEEc-CCceEEEEecccC-CeeEEEEeCCCCceEEEEcCCCCEEEEEE
Confidence 34321 134455444 4569998875432 22233334456789999999877766554
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.98 E-value=0.00087 Score=55.40 Aligned_cols=170 Identities=9% Similarity=0.069 Sum_probs=106.7
Q ss_pred cccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEe---CCCCCEEEEEec---
Q 016032 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDI---NPEKGVVLVADN--- 136 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~--- 136 (396)
...-..+++|++..+.++++.-..++|..|+...+..... ..+.....+. ....+..+.+ .|+++++++...
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~-~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGD-GEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSC-CSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCC-CcceeeEEEEeccCCCCcEEEEEccccc
Confidence 3444567899987344444444799999999875543332 2221100011 1123688999 688777775442
Q ss_pred ----------CCeEEEEeCC---CCCCCccceee---ec-------CCccEEEEEeccCCCCEEEEeeCC-CcEEEEecC
Q 016032 137 ----------FGFLYLVDAR---TNSRSGEAILI---HR-------KGSKVVGLHCNPIQPELLLSCGND-HFARIWDIR 192 (396)
Q Consensus 137 ----------~g~i~i~d~~---~~~~~~~~~~~---~~-------~~~~i~~~~~~~~~~~~l~~~~~d-~~i~~wd~~ 192 (396)
+..|..+|+. +++.....-.. .. .......++..+ +++..++++.. +.|...+..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTT
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCC
Confidence 5789999998 66554322110 00 112488999999 99999988887 777777654
Q ss_pred CCCCCCccc-cC---CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 016032 193 RLEAGSSLC-DL---PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 193 ~~~~~~~~~-~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
.. ....+. .. ......+.|+++|+|..|++....|.|..+|+.
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 22 111111 00 112346789999999999888779999999987
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.95 E-value=0.0054 Score=50.34 Aligned_cols=267 Identities=12% Similarity=0.085 Sum_probs=136.9
Q ss_pred CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEE
Q 016032 43 GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122 (396)
Q Consensus 43 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 122 (396)
.+|.|.|+.++....+....- -+.-.+|. ...++.-. ..++.++|+++.+.+..+..+.. |.--
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~-~~ViALra-g~~LQiFnletK~klks~~~~e~----------VvfW 112 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISA----DSAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD----------VTFW 112 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCC----SEEEECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEECSSC----------EEEE
T ss_pred CEEEEEECCCCCCcccccccc----ceeeeCCC-ccEEEEec-CCeEEEechHHhhhhcceecCCc----------cEEE
Confidence 368888887765543332112 23335787 66666655 78999999999999888877643 6666
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec--CCccEEEEEeccCCCCEEEEeeC-------CCcEEEEecCC
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR--KGSKVVGLHCNPIQPELLLSCGN-------DHFARIWDIRR 193 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~-------d~~i~~wd~~~ 193 (396)
.|-.... |+..+ +..|+.|++.....+.+....+. .+..|.....++ +..+++..+- .|.+.+|....
T Consensus 113 kWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 113 KWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp EECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred EecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecc
Confidence 6655443 33333 36899999986544433333221 245688888888 7777665442 37789998854
Q ss_pred CCCCCccccCCCCCceeEEEEcC--C-CCEEEEEeC---CCcEEEEEcccc-cccCCCcceeecccccc---cCCceeEE
Q 016032 194 LEAGSSLCDLPHKRVVNSAYFSP--S-GSKILTTSQ---DNRLRIWDSIFG-NLDSPSREIVHSHDFNR---HLTPFRAE 263 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~~~~---d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~ 263 (396)
... +.+ .+|......+.+.. . ..+++.+.. .+.++|-++... .-..+.........+.. .-.|+.+.
T Consensus 190 ~~s-Q~i--eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamq 266 (365)
T 2xzh_A 190 KVS-QPI--EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 266 (365)
T ss_dssp TEE-EEE--CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEE
T ss_pred ccc-cee--eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEE
Confidence 211 111 24443332222211 1 123333332 258888888543 11111111000000000 11122223
Q ss_pred eCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeecCCcEEEEcCCCc
Q 016032 264 WDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSIFIWRPKEK 343 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~d~~i~iw~~~~~ 343 (396)
.++.-+. -| .-+.-|.|++||+++|.++..-+-.. ..+.........+-++...-.|.|.--.++..
T Consensus 267 vs~kygv-------iy-----viTK~G~ihlyDleTgt~i~~nrIS~-d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 267 ISEKHDV-------VF-----LITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EETTTTE-------EE-----EEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred ecccCCE-------EE-----EEeCCcEEEEEEcccCcEEEEeccCC-CceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 3322110 11 22556889999999999887654333 22222201122233333333555555444444
Q ss_pred c
Q 016032 344 S 344 (396)
Q Consensus 344 ~ 344 (396)
.
T Consensus 334 ~ 334 (365)
T 2xzh_A 334 N 334 (365)
T ss_dssp T
T ss_pred c
Confidence 4
No 299
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.91 E-value=0.0075 Score=50.74 Aligned_cols=196 Identities=14% Similarity=0.063 Sum_probs=102.7
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcE-EEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCc
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQV-GVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGL 98 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i-~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (396)
.+.+..+.+.+++ .+++.+. +|.| +-.|- +..-......+...+..+.+.|+ +.+++.+...+..+-+|- .+.
T Consensus 121 ~~~~~~i~~~~~~-~~~~~~~-~g~v~~S~Dg--G~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g~~G~~~~S~d~-gG~ 194 (327)
T 2xbg_A 121 PGSPRLIKALGNG-SAEMITN-VGAIYRTKDS--GKNWQALVQEAIGVMRNLNRSPS-GEYVAVSSRGSFYSTWEP-GQT 194 (327)
T ss_dssp SSCEEEEEEEETT-EEEEEET-TCCEEEESST--TSSEEEEECSCCCCEEEEEECTT-SCEEEEETTSSEEEEECT-TCS
T ss_pred CCCeEEEEEECCC-CEEEEeC-CccEEEEcCC--CCCCEEeecCCCcceEEEEEcCC-CcEEEEECCCcEEEEeCC-CCC
Confidence 3457788887766 5666554 5544 33332 22111222345567899999997 777666654433333332 122
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceee-ecCCccEEEEEeccCCCCEE
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILI-HRKGSKVVGLHCNPIQPELL 177 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l 177 (396)
.-..+..... ..+..+.+.+++..++ ++.+|.+++.+...+..-...... ......+.++.+.+ ++.++
T Consensus 195 tW~~~~~~~~--------~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~ 264 (327)
T 2xbg_A 195 AWEPHNRTTS--------RRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVW 264 (327)
T ss_dssp SCEEEECCSS--------SCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEE
T ss_pred ceeECCCCCC--------CccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEE
Confidence 2222211111 1277888888887654 455687777642212111111001 01123588899988 66766
Q ss_pred EEeeCCCcEEEEecCCCCCCCccccC-CCCCceeEEEEcCCCCEEEEEeCCCcEEEEE
Q 016032 178 LSCGNDHFARIWDIRRLEAGSSLCDL-PHKRVVNSAYFSPSGSKILTTSQDNRLRIWD 234 (396)
Q Consensus 178 ~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 234 (396)
+++. ++.| ++....++.-..+... .....+.++.|.+++. +++++.+|.|.-++
T Consensus 265 ~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 265 LAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 6654 6766 3333333322222211 2235678888875554 55666788776654
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.79 E-value=0.011 Score=49.86 Aligned_cols=202 Identities=13% Similarity=0.137 Sum_probs=112.6
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEE------------eCCCcEEEeecccc--eee-eEecC----CcccceeEEEE
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSG------------DKKGQVGVWDFYKV--SEK-IVYGN----IHSCIVNNIRF 72 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~------------~~dg~i~iwd~~~~--~~~-~~~~~----~~~~~v~~~~~ 72 (396)
.++.+.+-....-.++..|+| .+++++ ..+|.|.++|..+. +.. ..+.. ...-....+.+
T Consensus 41 ~C~~i~~~~~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~ 119 (355)
T 3sre_A 41 NCNLVKGIDNGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIST 119 (355)
T ss_dssp CEEECTTCCSCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEE
T ss_pred CCEEeCCCCCCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEE
Confidence 345555534456677888987 444443 16899999998742 211 11111 12336677777
Q ss_pred ec--CCCcEEEEEeC---CCeEEEEECCCCccccee--ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe----------
Q 016032 73 NP--TNDGTVYAASS---DGTVSCTDLETGLALSLM--NVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD---------- 135 (396)
Q Consensus 73 ~~--~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------- 135 (396)
.+ ++..+|+.+.. +.+|.+|++........+ ..... .....+.+.+.++|.+.++..
T Consensus 120 ~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~------~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 120 FIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK------LLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT------TCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred EECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC------CCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 66 32234555432 467888877654322211 11111 113378899999998777654
Q ss_pred -------cCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEe-eCCCcEEEEecCCCCCCCccccCCCCC
Q 016032 136 -------NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC-GNDHFARIWDIRRLEAGSSLCDLPHKR 207 (396)
Q Consensus 136 -------~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~ 207 (396)
..|.|+-+|.. + ... ....-...+.++|+| +++.++.+ +..+.|+.|++...........+...+
T Consensus 194 ~e~~~~~~~g~vyr~d~~--~-~~~---~~~~l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g 266 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPN--D-VRV---VAEGFDFANGINISP-DGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDT 266 (355)
T ss_dssp HHHHTTCCCEEEEEECTT--C-CEE---EEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSS
T ss_pred chhhccCCccEEEEEECC--e-EEE---eecCCcccCcceECC-CCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCC
Confidence 13566666653 1 111 111122578999999 88665554 457899999986321111111112245
Q ss_pred ceeEEEEcC-CCCEEEEEeCC
Q 016032 208 VVNSAYFSP-SGSKILTTSQD 227 (396)
Q Consensus 208 ~i~~~~~~~-~~~~l~~~~~d 227 (396)
..-.+++.+ +|++.+++..+
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESC
T ss_pred CCceEEEeCCCCcEEEEecCC
Confidence 667788888 58776655533
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.69 E-value=0.012 Score=49.10 Aligned_cols=147 Identities=9% Similarity=0.124 Sum_probs=90.3
Q ss_pred CcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC----CC---EEEEEec---CCeEEEEeCC
Q 016032 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE----KG---VVLVADN---FGFLYLVDAR 146 (396)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---~g~i~i~d~~ 146 (396)
..+++.....+-+.+||+ +|+.+..+.. . .++.+..-|+ ++ ++++... ++.|.+|++.
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g---------~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--G---------KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--S---------CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--C---------CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 455676777888999999 7887777632 1 1455544442 22 2333333 4789999763
Q ss_pred --CCCCCcccee----eecCCccEEEEEe--ccCCCC-EEEEeeCCCcEEEEecCCCC----CCCccccCCCCCceeEEE
Q 016032 147 --TNSRSGEAIL----IHRKGSKVVGLHC--NPIQPE-LLLSCGNDHFARIWDIRRLE----AGSSLCDLPHKRVVNSAY 213 (396)
Q Consensus 147 --~~~~~~~~~~----~~~~~~~i~~~~~--~~~~~~-~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~i~~~~ 213 (396)
+.. +..... .......+..+++ +|..+. ++++...+|.+..|++.... ..+.+..+...+.+..+.
T Consensus 108 p~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egcv 186 (355)
T 3amr_A 108 GKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMA 186 (355)
T ss_dssp TTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEE
T ss_pred CCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEE
Confidence 322 111100 0011134566777 663343 67778888999999985321 123344444566789999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcc
Q 016032 214 FSPSGSKILTTSQDNRLRIWDSI 236 (396)
Q Consensus 214 ~~~~~~~l~~~~~d~~i~iwd~~ 236 (396)
..+....|+.+-++.-|..++.+
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECS
T ss_pred EcCCCCeEEEecccceEEEEeCC
Confidence 99988899999998766666644
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.53 E-value=0.052 Score=49.98 Aligned_cols=201 Identities=9% Similarity=0.055 Sum_probs=116.6
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL 100 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (396)
..+.+|+|.+.+++++++-...+.|+.++.......... ...-.....+++.+.+++++++-+..+.|.+.++.....
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~-~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~- 426 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV-TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR- 426 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE-ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE-
Confidence 346788998865466666666788988888764433333 223356778999876356666666778999999875433
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec--CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN--FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+... . .....++++.|....|+.+.. .+.|...++..... .. .....-...+.|++.+..+.+.+
T Consensus 427 ~~l~~~--~------l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~--~~-l~~~~l~~P~GlalD~~~~~LY~ 495 (619)
T 3s94_A 427 KILISE--D------LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR--VV-LVNTSLGWPNGLALDYDEGKIYW 495 (619)
T ss_dssp EEEECT--T------CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EE-EECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEEC--C------CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc--EE-EEeCCCCCCeeeEEcccCCEEEE
Confidence 222211 1 122789999997555655543 35777777654321 11 11222336789999983444445
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEE-eCCCcEEEEEcccc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTT-SQDNRLRIWDSIFG 238 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~ 238 (396)
+=+..+.|..+++..... +.+.. ........++...+ .|+.. ...+.|...|..++
T Consensus 496 aD~~~~~I~~~~~dG~~~-~~~~~-~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 496 GDAKTDKIEVMNTDGTGR-RVLVE-DKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EETTTTEEEEEESSSCCC-EEEEE-CCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred EECCCCEEEEEecCCCce-EEEec-cCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 545567898898854222 12211 11122344555433 44444 34556777776665
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.45 E-value=0.042 Score=46.68 Aligned_cols=216 Identities=10% Similarity=-0.003 Sum_probs=109.9
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceee--eEe--cCCcccceeEEEEecC---CCcEEEEEeC
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEK--IVY--GNIHSCIVNNIRFNPT---NDGTVYAASS 85 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~--~~~~~~~v~~~~~~~~---~~~~l~s~~~ 85 (396)
+..+-..-.....++|.|+| +++++ ..+|.|++++ . +... ..+ ..........|+|+|+ ++.++++-..
T Consensus 23 ~~~va~~l~~P~~ia~~pdG-~l~V~-e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPDG-GMLIA-ERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp EEEEECCCSCEEEEEECTTS-CEEEE-ETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEEEECCCCCceEEEEcCCC-eEEEE-eCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 34444444567899999999 55544 5679999998 3 3221 111 0112456889999996 3455554443
Q ss_pred C-----CeEEEEECCCCcc---cceee-cCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-------------CCeEEEE
Q 016032 86 D-----GTVSCTDLETGLA---LSLMN-VNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-------------FGFLYLV 143 (396)
Q Consensus 86 d-----g~v~iwd~~~~~~---~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------~g~i~i~ 143 (396)
. +.|..++...+.. ...+. .+... ... .....++|.|+|.++++.+. .|.|.-+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~--~~~--h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARP--HGL--HSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCT--TCC--CCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCC--CCC--cCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 2 6788888764421 11111 11100 011 11467999999976665432 2567666
Q ss_pred eCCCCCCC----------ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcE------EEEecCCCCC-----------
Q 016032 144 DARTNSRS----------GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFA------RIWDIRRLEA----------- 196 (396)
Q Consensus 144 d~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i------~~wd~~~~~~----------- 196 (396)
+....-.. ...+....+ .....++|+|.++.++++-.....+ .+.-+..+..
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Confidence 66531000 001111111 1467789998445555553332321 1222222110
Q ss_pred ----CCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 197 ----GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 197 ----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
...+..+.+......++| .+|.++++.-..+.|...++...
T Consensus 254 ~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 254 DPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp CTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 011111222334567777 46666666556677777777643
No 304
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.42 E-value=0.048 Score=46.81 Aligned_cols=267 Identities=13% Similarity=0.078 Sum_probs=139.3
Q ss_pred CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEE
Q 016032 43 GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122 (396)
Q Consensus 43 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 122 (396)
..|.|.|+.++..+.+... ..-+.-.+|. ...++.=. ..++.++|+++.+.+..+..+.. |.--
T Consensus 48 ~~vvIiDl~~~~~~~rrpi----~AdsAIMnP~-~~iiALra-g~~lQiFnle~K~klks~~~~e~----------VvfW 111 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI----SADSAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD----------VTFW 111 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC----CCSEEEECSS-SSCEEEEE-TTEEEEEETTTTEEEEEEECSSC----------CCEE
T ss_pred CeEEEEECCCCCcceeccc----ccceeeeCCC-CcEEEEec-CCeEEEEchHHhhhhcceecCCC----------ceEE
Confidence 3688888877655433221 1223446777 66666654 78999999999998888876544 4444
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec--CCccEEEEEeccCCCCEEEEeeC-------CCcEEEEecCC
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR--KGSKVVGLHCNPIQPELLLSCGN-------DHFARIWDIRR 193 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~-------d~~i~~wd~~~ 193 (396)
.|-.+ +.|+..+ +..|+.|++.....+.+....+. .+..|.....++ +..+++..+- .|.+.+|....
T Consensus 112 kWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 112 KWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp EEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred EecCC-CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeeccc
Confidence 44333 3333333 46899999976444433333221 245788888888 7787765432 47889999854
Q ss_pred CCCCCccccCCCCCceeEEEEcCC---CCEEEEEeC---CCcEEEEEcccc-cccCCCcceeecccccc---cCCceeEE
Q 016032 194 LEAGSSLCDLPHKRVVNSAYFSPS---GSKILTTSQ---DNRLRIWDSIFG-NLDSPSREIVHSHDFNR---HLTPFRAE 263 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~ 263 (396)
.. .....+|......+....+ ..+++.+.. .+.++|-++... .-..+.........+.. .-.|+.+.
T Consensus 189 ~~---sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamq 265 (494)
T 1bpo_A 189 KV---SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (494)
T ss_dssp CC---EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEE
T ss_pred cc---cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEE
Confidence 21 1111245544433333211 123444433 278999988543 11111111111111111 11123333
Q ss_pred eCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCCCCCCCcceeeec-cCCcEEEeecCCcEEEEcCCC
Q 016032 264 WDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDPNITTISPVNKLH-PRDDVLASGSSRSIFIWRPKE 342 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~sg~d~~i~iw~~~~ 342 (396)
.++..+. -| .-+.-|.|++||+++|.++..-+-.. ..+... +.+ ..+-++...-.|.|.--.++.
T Consensus 266 vs~kygv-------iy-----viTK~G~i~lyDleTgt~i~~nrIs~-~~iF~t-~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 266 ISEKHDV-------VF-----LITKYGYIHLYDLETGTCIYMNRISG-ETIFVT-APHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EETTTTE-------EE-----EEETTSEEEEEETTTCCEEEEEECCS-SCEEEE-EEETTTTEEEEEETTCEEEEEEECT
T ss_pred ecccCCE-------EE-----EEecCceEEEEecccceeeeeecccC-CceEEe-cccCCCCcEEEEccCceEEEEEEcc
Confidence 3333211 11 22556789999999999887654333 222221 222 233333333355555555554
Q ss_pred cce
Q 016032 343 KSE 345 (396)
Q Consensus 343 ~~~ 345 (396)
...
T Consensus 332 ~~i 334 (494)
T 1bpo_A 332 ENI 334 (494)
T ss_dssp TTH
T ss_pred ccc
Confidence 443
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.30 E-value=0.068 Score=45.81 Aligned_cols=149 Identities=9% Similarity=0.106 Sum_probs=93.6
Q ss_pred CcEEEEEeCCCeEEEEECCCCcccceeecCC-CCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc--
Q 016032 77 DGTVYAASSDGTVSCTDLETGLALSLMNVNP-NGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE-- 153 (396)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~-- 153 (396)
+..++.+- ++.||.-++......+.+..+. -.+ ..+..+..+|+|.+|+..+. ..|.+..+..+.....
T Consensus 32 ~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f------~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 32 GTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVL------DDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp TTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCC------CTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCH
T ss_pred CCEEEEEE-CCEEEEEECCCCCcceEEecCccccc------CceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccc
Confidence 55555544 4778887877544444444432 111 12777999999999988865 5888888773321111
Q ss_pred -------c--eeee----cCCccEEEEEeccC--CCCEEEEeeCCCcEEEEecCCCCC-CCcccc----C---CCCCcee
Q 016032 154 -------A--ILIH----RKGSKVVGLHCNPI--QPELLLSCGNDHFARIWDIRRLEA-GSSLCD----L---PHKRVVN 210 (396)
Q Consensus 154 -------~--~~~~----~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~----~---~~~~~i~ 210 (396)
. +... ....+|..+.|+|. .+..|++-..|+.|++||+..... ...+.. + .....|.
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEE
Confidence 0 1111 02457999999994 345899999999999999975221 111111 1 1225688
Q ss_pred EEEEcCCCCEEEEEe--CCCcEEEE
Q 016032 211 SAYFSPSGSKILTTS--QDNRLRIW 233 (396)
Q Consensus 211 ~~~~~~~~~~l~~~~--~d~~i~iw 233 (396)
+++|.+++-.|...+ ..|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999888887755 77777654
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.29 E-value=0.061 Score=45.12 Aligned_cols=279 Identities=10% Similarity=0.076 Sum_probs=135.2
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee--eeEe-cCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE--KIVY-GNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET 96 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 96 (396)
...+.+|.|.+.+ ..+++| ..|.| +.....++. .... .......+..|.|.+ +..++ ++..+.|.. ..+.
T Consensus 35 ~~~~~~v~~~~~~-~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRH-HGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSS-CEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCC-cEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEE-EECCCeEEE-ECCC
Confidence 4579999998766 556654 56654 333333321 1111 012345788999976 34444 445664433 3333
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEE-EeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYL-VDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i-~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
|+.-........ .. ..+..+.+.+++..++++ .+|.|+. .| .+.. ..... ......+..+.+.| ++.
T Consensus 108 G~tW~~~~~~~~-~~-----~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~t-W~~~~-~~~~~~~~~~~~~~-~~~ 175 (327)
T 2xbg_A 108 GQSWSQIPLDPK-LP-----GSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKN-WQALV-QEAIGVMRNLNRSP-SGE 175 (327)
T ss_dssp TSSCEECCCCTT-CS-----SCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSS-EEEEE-CSCCCCEEEEEECT-TSC
T ss_pred CCCceECccccC-CC-----CCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCC-CEEee-cCCCcceEEEEEcC-CCc
Confidence 443222221100 00 115666666666655555 4554432 22 1211 11111 12233688899998 777
Q ss_pred EEEEeeCCCcEEE-EecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeeccccc
Q 016032 176 LLLSCGNDHFARI-WDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFN 254 (396)
Q Consensus 176 ~l~~~~~d~~i~~-wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 254 (396)
+++++.. |.+.. +|-. +..-..+. ......+..+.+.+++.++++ +.+|.+.+.+...++.-..... ....
T Consensus 176 ~~~~g~~-G~~~~S~d~g-G~tW~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~----~~~~ 247 (327)
T 2xbg_A 176 YVAVSSR-GSFYSTWEPG-QTAWEPHN-RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLS----PLRR 247 (327)
T ss_dssp EEEEETT-SSEEEEECTT-CSSCEEEE-CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBC----TTSS
T ss_pred EEEEECC-CcEEEEeCCC-CCceeECC-CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccC----Cccc
Confidence 7766654 44443 3320 11111221 234567889999998876654 4578777764332322111100 0000
Q ss_pred ccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhcCC--CCCCCcceeeeccCCcEEEeecC
Q 016032 255 RHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVMDP--NITTISPVNKLHPRDDVLASGSS 332 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~sg~d 332 (396)
.......+.+.+. +.+++ . +.++.| ++....|+.-..+... ....+..+ .|.+++.+++.|.+
T Consensus 248 ~~~~~~~v~~~~~---------~~~~~---~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v-~~~~~~~~~~~G~~ 312 (327)
T 2xbg_A 248 NSVGFLDLAYRTP---------NEVWL---A-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKI-LFFSPDQGFILGQK 312 (327)
T ss_dssp CCSCEEEEEESSS---------SCEEE---E-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEE-EEEETTEEEEECST
T ss_pred CCcceEEEEecCC---------CEEEE---E-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEE-EEECCCceEEEcCC
Confidence 1111235566654 33333 1 224445 3344334322222211 12456666 67777777777779
Q ss_pred CcEEEEcC
Q 016032 333 RSIFIWRP 340 (396)
Q Consensus 333 ~~i~iw~~ 340 (396)
|.|.-++-
T Consensus 313 G~i~~~~~ 320 (327)
T 2xbg_A 313 GILLRYVT 320 (327)
T ss_dssp TEEEEECC
T ss_pred ceEEEEcC
Confidence 98877664
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.27 E-value=0.039 Score=42.59 Aligned_cols=187 Identities=10% Similarity=-0.027 Sum_probs=97.5
Q ss_pred cEEEEEeCCCcEEEeecccce------eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCC
Q 016032 34 HILLSGDKKGQVGVWDFYKVS------EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP 107 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 107 (396)
.+|+....| +++.=...... ....+..+-=..+..++|+|+ +.+.++ .+|.+.-.+..+.....-+..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~-G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-- 78 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPG-GELYGV--LNDKIYKGTPPTHDNDNWMGR-- 78 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTT-SCEEEE--ETTEEEEESCCCSTTCCHHHH--
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCC-ccEEEE--eCCeEEEECCCCCCccccccc--
Confidence 467777776 55544333322 122222211247889999997 765555 677766666544322211111
Q ss_pred CCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccc---ee-eecCCccEEEEEeccCCCCEEEEeeCC
Q 016032 108 NGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEA---IL-IHRKGSKVVGLHCNPIQPELLLSCGND 183 (396)
Q Consensus 108 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~---~~-~~~~~~~i~~~~~~~~~~~~l~~~~~d 183 (396)
...-+...+....++.|.|+|.+.++ .||.|+-++..+.....-+ .. ....-..+..|.+.| ++.+.++. |
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--d 153 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--G 153 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--T
T ss_pred ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--C
Confidence 00001111122478889999998888 5699988876442221110 01 111113579999999 88877776 6
Q ss_pred CcEEEEecCCCCCCCcc---ccC--CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 016032 184 HFARIWDIRRLEAGSSL---CDL--PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 184 ~~i~~wd~~~~~~~~~~---~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 235 (396)
+.++-+...+.....-+ ..+ ..-.....+.|.+++.+.++. ++ ++|..
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~ 206 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYED 206 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEE
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEec
Confidence 77543332211110000 000 122234557788888877766 66 44443
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.26 E-value=0.033 Score=55.15 Aligned_cols=193 Identities=13% Similarity=0.103 Sum_probs=110.7
Q ss_pred ecCCCCcEEEEEe----------CCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC
Q 016032 28 FHPTNNHILLSGD----------KKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG 97 (396)
Q Consensus 28 ~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (396)
|..+...+|+.|. ..|.|.++++...+..........++|++++-.. + +|++|- ...|++|++...
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~--g-~Lla~i-g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN--G-KLLASI-NSTVRLYEWTTE 914 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEET--T-EEEEEE-TTEEEEEEECTT
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeC--C-EEEEEc-CCEEEEEECCCC
Confidence 4333335788776 3578999999755444443344677899988553 4 555544 478999999865
Q ss_pred cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEE
Q 016032 98 LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELL 177 (396)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 177 (396)
+.+. .... .+ ..+..+.....++++++|+.-..+.++..+.................++++.+-. ...+
T Consensus 915 ~~L~-~~~~--~~------~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld--~~t~ 983 (1158)
T 3ei3_A 915 KELR-TECN--HY------NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD--DDNF 983 (1158)
T ss_dssp SCEE-EEEE--EC------CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEE--TTEE
T ss_pred ceEE-EEee--cc------ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEc--cCcE
Confidence 5333 1110 00 0022333334578899998877777765433222122222233445788888874 4578
Q ss_pred EEeeCCCcEEEEecCCCCCC----Cccc---cCCCCCceeEEEE---cCC---------CCEEEEEeCCCcEEEEEc
Q 016032 178 LSCGNDHFARIWDIRRLEAG----SSLC---DLPHKRVVNSAYF---SPS---------GSKILTTSQDNRLRIWDS 235 (396)
Q Consensus 178 ~~~~~d~~i~~wd~~~~~~~----~~~~---~~~~~~~i~~~~~---~~~---------~~~l~~~~~d~~i~iwd~ 235 (396)
+.+..+|.|.+......... ..+. .+.....|+++.- .+. ...++.++.+|.|-+.-.
T Consensus 984 l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~p 1060 (1158)
T 3ei3_A 984 LGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTS 1060 (1158)
T ss_dssp EEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEEE
T ss_pred EEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEEE
Confidence 88889999999876542110 1111 1123445666652 222 234677777888776643
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.20 E-value=0.069 Score=43.97 Aligned_cols=230 Identities=11% Similarity=0.079 Sum_probs=129.6
Q ss_pred CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEE
Q 016032 86 DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVV 165 (396)
Q Consensus 86 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~ 165 (396)
+.+|.|.|+..+......... .-+.-.+|..+.+|.-. ...+.++|+++.... ..+.....|.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~------------AdsAIMnP~~~ViALra-g~~LQiFnletK~kl----ks~~~~e~Vv 110 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS------------ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKM----KAHTMTDDVT 110 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC------------CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEE----EEEECSSCEE
T ss_pred CCEEEEEECCCCCCccccccc------------cceeeeCCCccEEEEec-CCeEEEechHHhhhh----cceecCCccE
Confidence 347888899887665333222 23455688888777765 678999999986544 3344444677
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccC---CCCCceeEEEEcCCCCEEEEEeC-------CCcEEEEEc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDL---PHKRVVNSAYFSPSGSKILTTSQ-------DNRLRIWDS 235 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-------d~~i~iwd~ 235 (396)
-=.|-. .+.|+..+ +..|+-|++........+... -....|..-..+++.++++..+- .|.+.+|..
T Consensus 111 fWkWis--~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~ 187 (365)
T 2xzh_A 111 FWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 187 (365)
T ss_dssp EEEECS--SSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET
T ss_pred EEEecC--CCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEee
Confidence 778874 56666655 368999999753322222111 12467778888999998765542 367888988
Q ss_pred ccccccCCCcceeecccccccCCceeEEeCCCC---CCCceeeEeeeeeeecccccccceEEEEcCcc---chhh-----
Q 016032 236 IFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKD---PSESLAVIGRYISENYNGAALHPIDFIDITTG---QLVA----- 304 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~---~~~~----- 304 (396)
+.+.. ...++|...+. .+..++ +...+++.. -+...+.++|-++... ....
T Consensus 188 er~~s----------Q~ieGhaa~F~-~~~~~g~~~~~~lf~fa~-------r~~~g~kLhIiEi~~~~~~~~~f~kk~v 249 (365)
T 2xzh_A 188 DRKVS----------QPIEGHAASFA-QFKMEGNAEESTLFCFAV-------RGQAGGKLHIIEVGTPPTGNQPFPKKAV 249 (365)
T ss_dssp TTTEE----------EEECCSEEEEE-EECCTTCSSCEEEEEEEE-------EETTEEEEEEEECSSCCTTCCCCCCEEE
T ss_pred ccccc----------ceeeeeeeeeE-EEecCCCCCCceEEEEEE-------ecCCCcEEEEEEcCCCCCCCCCcccccc
Confidence 75432 12222322211 111110 011111111 1222357888887432 1111
Q ss_pred hhc-CCC--CCCCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeeccccce
Q 016032 305 EVM-DPN--ITTISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQKEEMK 354 (396)
Q Consensus 305 ~~~-~~~--~~~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~~~ 354 (396)
.+. .+. .+--.++ ..++.-.++..-+ -|.|++||+.++.++..-.-..+
T Consensus 250 di~fppea~~DFPVam-qvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 250 DVFFPPEAQNDFPVAM-QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp EECCCTTCTTCCEEEE-EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred eeeCCccccCCceEEE-EecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC
Confidence 011 111 1111222 4566666666666 79999999999998877555443
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.13 E-value=0.083 Score=43.59 Aligned_cols=231 Identities=13% Similarity=0.050 Sum_probs=107.3
Q ss_pred CcEEEEEe-CC-----CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-----CeEEEEeC
Q 016032 77 DGTVYAAS-SD-----GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-----GFLYLVDA 145 (396)
Q Consensus 77 ~~~l~s~~-~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~i~d~ 145 (396)
+.+++.|+ .+ ..+.+||+.+.+-...-..+.. .. -.+++ ..++..++.|+.+ ..+.+||+
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~---~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK-----RR---YVASV-SLHDRIYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC-----CB---SCEEE-EETTEEEEECCBCSSCBCCCEEEEET
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh-----hc---cccEE-EECCEEEEEcCCCCCccCceEEEEEC
Confidence 44555555 22 3688889887654332211111 10 11111 1246667777654 46899998
Q ss_pred CCCC---CCccceeeecCCccEEEEEeccCCCCEEEEeeCC-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCC
Q 016032 146 RTNS---RSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPS 217 (396)
Q Consensus 146 ~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~ 217 (396)
.+.. ... .............+.+ ++.+++.|+.+ ..+.+||+.+.+-.. +........-.+++.. +
T Consensus 86 ~~~~~~~W~~-~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~-~ 159 (301)
T 2vpj_A 86 TADEDGVWYS-VAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM-LGDMQTAREGAGLVVA-S 159 (301)
T ss_dssp TCCTTCCCEE-ECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEE-EEECSSCCBSCEEEEE-T
T ss_pred CCCCCCeeEE-CCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEE-CCCCCCCcccceEEEE-C
Confidence 8765 211 1011111111122222 56777777654 358889886543211 1111111111122222 6
Q ss_pred CCEEEEEeCC-----CcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeeccccc----
Q 016032 218 GSKILTTSQD-----NRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAA---- 288 (396)
Q Consensus 218 ~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~---- 288 (396)
+++++.|+.+ ..+.+||+.+.+-.... .....+. ........++++. .|+.
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----~~p~~r~------------~~~~~~~~~~i~v---~GG~~~~~ 219 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-----PMATKRS------------GAGVALLNDHIYV---VGGFDGTA 219 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-----CCSSCCB------------SCEEEEETTEEEE---ECCBCSSS
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCC-----CCCcccc------------cceEEEECCEEEE---EeCCCCCc
Confidence 7777777654 45888888765432110 0000000 0011111233333 2222
Q ss_pred -ccceEEEEcCccchhhhhcCCCCCCCcceeeeccCCcEEEeec-C-----CcEEEEcCCCcc
Q 016032 289 -LHPIDFIDITTGQLVAEVMDPNITTISPVNKLHPRDDVLASGS-S-----RSIFIWRPKEKS 344 (396)
Q Consensus 289 -d~~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~sg~-d-----~~i~iw~~~~~~ 344 (396)
...+.+||+.+.+-...-..+....... +..-++++++.|+ + ..+.+||+.+.+
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVG--ATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCE--EEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCcEEECCCCCCccccee--EEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 3568999987654322111111111111 2334777878776 5 457888887764
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.06 E-value=0.11 Score=43.99 Aligned_cols=150 Identities=13% Similarity=0.040 Sum_probs=78.5
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC---CCEEEEEec----C
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE---KGVVLVADN----F 137 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~----~ 137 (396)
.....|+|.|+ +. |+.+..+|.|++++ ..++ ......+ . . .........++++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pd-G~-l~V~e~~g~I~~~d-~~G~-~~~~~~~-v-~--~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 29 EVPWSIAPLGG-GR-YLVTERPGRLVLIS-PSGK-KLVASFD-V-A--NVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp SCEEEEEEEET-TE-EEEEETTTEEEEEC-SSCE-EEEEECC-C-C--CSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCeEEEEcCC-Ce-EEEEeCCCEEEEEe-CCCc-eEeeccc-e-e--ecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 45688999998 66 45556679999997 3444 1111111 0 0 000123788999997 555555543 2
Q ss_pred ----CeEEEEeCCCCC-CC---cccee-ee-cCCccEEEEEeccCCCCEEEEeeC-------------CCcEEEEecCCC
Q 016032 138 ----GFLYLVDARTNS-RS---GEAIL-IH-RKGSKVVGLHCNPIQPELLLSCGN-------------DHFARIWDIRRL 194 (396)
Q Consensus 138 ----g~i~i~d~~~~~-~~---~~~~~-~~-~~~~~i~~~~~~~~~~~~l~~~~~-------------d~~i~~wd~~~~ 194 (396)
..|..++..... .. ..+.. .. ........++|.| ++.++++.+. .|.|.-++....
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 567777765431 00 01111 11 1111346789999 8887776443 244555554321
Q ss_pred CC------CCccccCCCCCceeEEEEcC-CCCEEEEE
Q 016032 195 EA------GSSLCDLPHKRVVNSAYFSP-SGSKILTT 224 (396)
Q Consensus 195 ~~------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 224 (396)
-. ...+...++. ....++|+| ++.++++-
T Consensus 180 ~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 180 PPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 00 0111122333 356899999 66655543
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.04 E-value=0.043 Score=42.37 Aligned_cols=152 Identities=9% Similarity=-0.053 Sum_probs=81.4
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee------eeEecC-CcccceeEEEEecCCCcEEEEEeCCCeEEEEE
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE------KIVYGN-IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTD 93 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 93 (396)
..+..++|+|+| .+.+. .+|.+.-.+..+... ...+.. +-. .-.++.|.|+ +.+.++ .||.|.-++
T Consensus 41 ~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~-G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPN-GYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTT-SCEEEE--ETTEEEEES
T ss_pred ccceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCC-CCEEEe--CCCEEEEeC
Confidence 478899999988 55555 667665555433111 111111 111 2478999998 666666 469888777
Q ss_pred CCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCc----cceeeecCCccEEEEEe
Q 016032 94 LETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSG----EAILIHRKGSKVVGLHC 169 (396)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~----~~~~~~~~~~~i~~~~~ 169 (396)
-.+.....-+.. ...-+...+..+..+.+.|+|.+.++. ++.++-....+..... ........-...+.+.|
T Consensus 114 pP~~~~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 114 PPQSDTDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp CCCSTTCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred CCcCCCCceecc--ccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 543222111100 000112233458999999999988777 7776543333221110 00111111123555678
Q ss_pred ccCCCCEEEEeeCCCcE
Q 016032 170 NPIQPELLLSCGNDHFA 186 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i 186 (396)
.+ ++.++++. ++.+
T Consensus 190 ~~-~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 190 SS-VGTLFGVQ--GGKF 203 (236)
T ss_dssp CT-TSCEEEEE--TTEE
T ss_pred CC-CCcEEEEe--CCeE
Confidence 88 77766665 6633
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.99 E-value=0.079 Score=43.76 Aligned_cols=188 Identities=14% Similarity=0.130 Sum_probs=91.2
Q ss_pred cEEEEEeCC----CcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCC-----CeEEEEECCCCccccee
Q 016032 34 HILLSGDKK----GQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSD-----GTVSCTDLETGLALSLM 103 (396)
Q Consensus 34 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~ 103 (396)
.+++.|+.+ ..+.+||+.+..-..... ...... .+++.. + +.+++.|+.+ ..+.+||..+.+-...-
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVYM-A-GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-T-TEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEEE-C-CEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 566677653 357888887654222211 111111 122222 3 6677777654 35888998876543332
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC-----eEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEE
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG-----FLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g-----~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
..+.. .. -.+++. -++..++.|+.++ .+.+||+.+..-.... ......... +++.. ++.+++
T Consensus 94 ~~p~~-----r~---~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~-~~~~~--~~~iyv 160 (302)
T 2xn4_A 94 NMRDR-----RS---TLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-PMNTRRSSV-GVGVV--GGLLYA 160 (302)
T ss_dssp CCSSC-----CB---SCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-CCSSCCBSC-EEEEE--TTEEEE
T ss_pred CCCcc-----cc---ceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-CCCCcccCc-eEEEE--CCEEEE
Confidence 21111 10 111111 2566777776553 5788888765422110 011111111 22222 566777
Q ss_pred EeeCC-------CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC-----CcEEEEEccccc
Q 016032 179 SCGND-------HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGN 239 (396)
Q Consensus 179 ~~~~d-------~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 239 (396)
.|+.+ ..+.+||+.+..-.. +..+.....-.+++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNATTNEWTY-IAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ECCEETTTTEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EeCCCCCCCccccEEEEEeCCCCcEEE-CCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 77642 358889987543211 1111111111122222 67777777754 368889987654
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.86 E-value=0.11 Score=43.14 Aligned_cols=188 Identities=10% Similarity=0.029 Sum_probs=91.3
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC-----C------CeEEEEECCCCcccce
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS-----D------GTVSCTDLETGLALSL 102 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----d------g~v~iwd~~~~~~~~~ 102 (396)
.+++.|+ ..+.+||..+.+-...-...............+ +..++.|+. . ..+.+||..+.+-...
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKE-NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTT-CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEEC-CEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 3556666 478999998765332211111122222222334 677777773 1 1277888887654322
Q ss_pred eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC--------CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 103 MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF--------GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
-..+.. . .-.+++.. ++..++.|+.+ ..+.+||+.+..-.... ...........+ .. ++
T Consensus 83 ~~~p~~-----r---~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~-~~--~~ 149 (315)
T 4asc_A 83 PPLPSP-----R---CLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYVVYGHTVL-SH--MD 149 (315)
T ss_dssp CCBSSC-----E---ESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEE-EE--TT
T ss_pred CCCCcc-----h---hceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCcccceeEE-EE--CC
Confidence 111111 1 01112222 55666666632 46889998875321110 111111111222 22 56
Q ss_pred CEEEEeeC-C-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC-----cEEEEEccccc
Q 016032 175 ELLLSCGN-D-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN-----RLRIWDSIFGN 239 (396)
Q Consensus 175 ~~l~~~~~-d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 239 (396)
.+++.|+. + ..+.+||+.+.+-. .+..+.....-.+++.. ++++++.|+.++ .+.+||+.+.+
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 77777776 2 46889998754321 11111111111122222 667777777654 47888887654
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.84 E-value=0.1 Score=43.13 Aligned_cols=188 Identities=10% Similarity=0.021 Sum_probs=93.0
Q ss_pred cEEEEEeCC--CcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCC----CeEEEEECCCCcccceeecC
Q 016032 34 HILLSGDKK--GQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSD----GTVSCTDLETGLALSLMNVN 106 (396)
Q Consensus 34 ~~l~s~~~d--g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~ 106 (396)
.+++.|+.+ ..+.+||..+..-..... ...... .+++.. + +.+++.|+.+ ..+.+||..+.+-...-..+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~-~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVFW-D-NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEEE-T-TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEEE-C-CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 566777653 568888887754222111 111111 122222 3 5677777654 56888998887654332222
Q ss_pred CCCCCCCCcceeeeEEEeCCCCCEEEEEecC------CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEe
Q 016032 107 PNGWHGPRTWRMLYGMDINPEKGVVLVADNF------GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSC 180 (396)
Q Consensus 107 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 180 (396)
... . ....+.+ ++..++.|+.+ ..+.+||+.+..-.... ...........+.+ ++.+++.|
T Consensus 90 ~~r-----~--~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~---~~~iyv~G 156 (306)
T 3ii7_A 90 TPR-----D--SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP-SMLTQRCSHGMVEA---NGLIYVCG 156 (306)
T ss_dssp SCC-----B--SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTEEEEEC
T ss_pred ccc-----c--ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-CCcCCcceeEEEEE---CCEEEEEC
Confidence 111 0 0112222 56667777654 46889998875422110 01111111122222 56677777
Q ss_pred eC---------CCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC-----CcEEEEEccccc
Q 016032 181 GN---------DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGN 239 (396)
Q Consensus 181 ~~---------d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 239 (396)
+. -..+.+||+.+..-. .+..+.....-.+++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 157 G~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 157 GSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEESCTTTCEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCcccccceEEEeCCCCCeEE-ECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 64 345889998764321 11111111111122222 66677777653 358889987654
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.82 E-value=0.068 Score=44.13 Aligned_cols=188 Identities=13% Similarity=0.038 Sum_probs=93.3
Q ss_pred cEEEEEeCC-----CcEEEeecccce---eeeEecCCcccceeEEEEecCCCcEEEEEeCC-----CeEEEEECCCCccc
Q 016032 34 HILLSGDKK-----GQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD-----GTVSCTDLETGLAL 100 (396)
Q Consensus 34 ~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~ 100 (396)
.+++.|+.+ ..+.+||..+.. -...........-.+++.. + +.+++.|+.+ ..+.+||+.+.+-.
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-G-DMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-T-TEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-C-CEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 677777765 468899987754 2221110011111122222 3 6667776643 36888998876644
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-----CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-----GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
..-..+... .. ..++.+ ++..++.|+.+ ..+.+||+.+..-.... ...........+.+ ++.
T Consensus 142 ~~~~~p~~r-~~------~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~---~~~ 208 (301)
T 2vpj_A 142 MLGDMQTAR-EG------AGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-PMATKRSGAGVALL---NDH 208 (301)
T ss_dssp EEEECSSCC-BS------CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTE
T ss_pred ECCCCCCCc-cc------ceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC-CCCcccccceEEEE---CCE
Confidence 332222111 00 111222 56677777654 46889998775422110 11111111122222 567
Q ss_pred EEEEeeCC-----CcEEEEecCCCCCCCccccCCCCC-ceeEEEEcCCCCEEEEEeCC-----CcEEEEEccccc
Q 016032 176 LLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKR-VVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGN 239 (396)
Q Consensus 176 ~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 239 (396)
+++.|+.+ ..+.+||+.+.+-. .+..+.... ....+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDSWT-TVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEEEeCCCCCcccceEEEEeCCCCcEE-ECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 77777764 46899998764321 111111111 1122222 67777777765 356778876543
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.81 E-value=0.19 Score=42.57 Aligned_cols=168 Identities=15% Similarity=0.132 Sum_probs=85.3
Q ss_pred CCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee--eeEe---cCCcccceeEEEEecC---CCc
Q 016032 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE--KIVY---GNIHSCIVNNIRFNPT---NDG 78 (396)
Q Consensus 7 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~---~~~~~~~v~~~~~~~~---~~~ 78 (396)
+|....+..+-..-.....|+|.|+|..+++ +...|.|++++...... ...+ ..........|+|+|+ ++.
T Consensus 4 ~p~g~~~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 4 APATVNVEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp --CCSEEEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCE
Confidence 3444445555444557789999999932554 45679999998543211 1101 0112345789999994 355
Q ss_pred EEEEEeC-------CCeEEEEECCCCc--c--cc-eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec----------
Q 016032 79 TVYAASS-------DGTVSCTDLETGL--A--LS-LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN---------- 136 (396)
Q Consensus 79 ~l~s~~~-------dg~v~iwd~~~~~--~--~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------- 136 (396)
+.++-+. ...|..|++.... . .. .+..-+.. ....+ ....++|.|+|.++++.+.
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~-~~~~h--~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~ 159 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL-STGNH--FGGRLVFDGKGYLFIALGENNQRPTAQDL 159 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC-BSSSC--CCCCEEECSSSEEEEEECCTTCGGGGGCT
T ss_pred EEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC-CCCcc--cCccEEECCCCcEEEEECCCCCCCccCCC
Confidence 5555332 2356666665431 1 11 11111100 00111 1467999999965555433
Q ss_pred ---CCeEEEEeCCCCCCC----------ccceeeecCCccEEEEEeccCCCCEEEE
Q 016032 137 ---FGFLYLVDARTNSRS----------GEAILIHRKGSKVVGLHCNPIQPELLLS 179 (396)
Q Consensus 137 ---~g~i~i~d~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 179 (396)
.|.|.-++....-.. ...+....+ .....++|.|..+.++++
T Consensus 160 ~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 160 DKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 246777776532100 011111122 247889999843444443
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.80 E-value=0.095 Score=43.36 Aligned_cols=188 Identities=12% Similarity=0.069 Sum_probs=93.3
Q ss_pred cEEEEEeCC----CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC------CeEEEEECCCCccccee
Q 016032 34 HILLSGDKK----GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD------GTVSCTDLETGLALSLM 103 (396)
Q Consensus 34 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~ 103 (396)
.+++.|+.+ ..+.+||..+..-...........-.+++.. + +.+++.|+.+ ..+.+||..+.+-...-
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-E-GKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-T-TEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-C-CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 677888755 5688888877543222111111111122222 3 6677777654 45889998877543322
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec---------CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCC
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN---------FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQP 174 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 174 (396)
..+.. .. -.+++. -++..++.|+. ...+.+||+.+..-.... ......... +++.. ++
T Consensus 135 ~~p~~-----r~---~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~-~~~~~--~~ 201 (306)
T 3ii7_A 135 SMLTQ-----RC---SHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKNH-GLVFV--KD 201 (306)
T ss_dssp CCSSC-----CB---SCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBSC-EEEEE--TT
T ss_pred CCcCC-----cc---eeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-Cccchhhcc-eEEEE--CC
Confidence 11111 00 111122 25566666643 355889998875422110 111111111 22222 55
Q ss_pred CEEEEeeCC-----CcEEEEecCCCCCCCccccCCC-CCceeEEEEcCCCCEEEEEeCC-----CcEEEEEccccc
Q 016032 175 ELLLSCGND-----HFARIWDIRRLEAGSSLCDLPH-KRVVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGN 239 (396)
Q Consensus 175 ~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 239 (396)
.+++.|+.+ ..+.+||+.+.+-. .+..+.. ......+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEEEEeCCCCCCCCceEEEeeCCCCcEE-ECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 677777653 35889998754321 1111111 111222333 67777888754 457888887644
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.79 E-value=0.085 Score=43.57 Aligned_cols=189 Identities=14% Similarity=0.103 Sum_probs=92.3
Q ss_pred cEEEEEeCCC-----cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC-----eEEEEECCCCccccee
Q 016032 34 HILLSGDKKG-----QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG-----TVSCTDLETGLALSLM 103 (396)
Q Consensus 34 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~ 103 (396)
.+++.|+.++ .+.+||..+..-...........-.+++.. + +.+++.|+.++ .+.+||+.+.+-...-
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-N-GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-TEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-C-CEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 6777877543 588888876542222111111111122222 3 66777776553 5778888876543332
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-------CCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCE
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-------FGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 176 (396)
..+.. .. -.+++. -++..++.|+. ...+.+||+.+..-.... ......... +++.. ++.+
T Consensus 141 ~~p~~-----r~---~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~-~~~~~--~~~i 207 (302)
T 2xn4_A 141 PMNTR-----RS---SVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-EMSTRRSGA-GVGVL--NNLL 207 (302)
T ss_dssp CCSSC-----CB---SCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-CCSSCCBSC-EEEEE--TTEE
T ss_pred CCCCc-----cc---CceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-CCccccccc-cEEEE--CCEE
Confidence 11111 10 111222 25566666654 245889998775422110 011111111 22222 5677
Q ss_pred EEEeeCC-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC-----cEEEEEccccc
Q 016032 177 LLSCGND-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN-----RLRIWDSIFGN 239 (396)
Q Consensus 177 l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 239 (396)
++.|+.+ ..+.+||+.+.+-. .+..+.....-.+++. .++++++.|+.++ .+.+||+.+.+
T Consensus 208 yv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 208 YAVGGHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEECCBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEECCCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 7787764 36889998754321 1111111111111222 2677777777653 48888887654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.73 E-value=0.24 Score=42.54 Aligned_cols=142 Identities=6% Similarity=-0.003 Sum_probs=89.8
Q ss_pred CCcEEEeecccceeeeEecCCc---ccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCccc------------ceeecC
Q 016032 42 KGQVGVWDFYKVSEKIVYGNIH---SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLAL------------SLMNVN 106 (396)
Q Consensus 42 dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~------------~~~~~~ 106 (396)
++.||.-++........+...+ -..|..+..+|+ +.+|+..+ +..|.|-.+..+... ..+...
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSps-G~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTS-GDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTT-SSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCC-CCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 4678888877443333332221 236788999999 88888886 568999998843211 122222
Q ss_pred CCCCCCCCcceeeeEEEeCCC---CCEEEEEecCCeEEEEeCCCCCCCccce-------eeecCCccEEEEEeccCCCCE
Q 016032 107 PNGWHGPRTWRMLYGMDINPE---KGVVLVADNFGFLYLVDARTNSRSGEAI-------LIHRKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 107 ~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~g~i~i~d~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~ 176 (396)
+.. ......|..+.|+|- +..|++-..|+.|++||+.......... ........+.+++|.+ ++-.
T Consensus 118 ~~~---~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lT 193 (452)
T 3pbp_A 118 EEE---VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK-DGLT 193 (452)
T ss_dssp GCC-----CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT-TSSC
T ss_pred Ccc---cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC-CCcE
Confidence 111 111245999999995 5789999999999999998632111100 1111124688999998 7877
Q ss_pred EEEee--CCCcEEEE
Q 016032 177 LLSCG--NDHFARIW 189 (396)
Q Consensus 177 l~~~~--~d~~i~~w 189 (396)
|...+ ..|.|+-.
T Consensus 194 LYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 194 LYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEecCCCCCEEEE
Confidence 77755 77888754
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.64 E-value=0.26 Score=41.78 Aligned_cols=159 Identities=9% Similarity=0.064 Sum_probs=83.9
Q ss_pred ceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee-eeEe--cCCcccceeEEEEecC---CCcEEEEEeC
Q 016032 12 NCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE-KIVY--GNIHSCIVNNIRFNPT---NDGTVYAASS 85 (396)
Q Consensus 12 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~--~~~~~~~v~~~~~~~~---~~~~l~s~~~ 85 (396)
.+..+-..-.....|+|.|+| ++++ +..+|.|++++.. +.. ...+ ..........|+|+|+ ++.++++-+.
T Consensus 20 ~~~~va~~l~~P~~ia~~pdG-~l~V-~e~~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 20 KISEVASDLEVPWSIAPLGGG-RYLV-TERPGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEECSCSCEEEEEEEETT-EEEE-EETTTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEeCCCCCCeEEEEcCCC-eEEE-EeCCCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 334444444567899999999 5444 4566999999743 331 1111 0112346889999996 3555555442
Q ss_pred ---C----CeEEEEECCCCc--c---cceee-cCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-------------CCe
Q 016032 86 ---D----GTVSCTDLETGL--A---LSLMN-VNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-------------FGF 139 (396)
Q Consensus 86 ---d----g~v~iwd~~~~~--~---~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------~g~ 139 (396)
+ ..|..|+..... . ...+. .+.. ..+ ....++|.|+|.++++.+. .|.
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~----~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~ 170 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGA----YIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGK 170 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECC----SSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCC----CCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeE
Confidence 3 567777776541 1 11111 1111 011 1467899999986666432 245
Q ss_pred EEEEeCCCCCCC-----ccceeeecCCccEEEEEeccCCCCEEEEe
Q 016032 140 LYLVDARTNSRS-----GEAILIHRKGSKVVGLHCNPIQPELLLSC 180 (396)
Q Consensus 140 i~i~d~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 180 (396)
|.-++....-.. ...+....+ .....++|+|.++.++++-
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEE
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEe
Confidence 666665432000 001111111 1356789998445555543
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.62 E-value=0.38 Score=48.09 Aligned_cols=231 Identities=13% Similarity=0.098 Sum_probs=118.9
Q ss_pred CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEE
Q 016032 43 GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGM 122 (396)
Q Consensus 43 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 122 (396)
.+|.|.|+.++..+.+.. -.--+.-.+|. ...++.= ...++.|+|+++.+.+..+..+.. |.--
T Consensus 48 ~~vvIidl~~~~~~~rrp----i~AdsAIMnP~-~~iiALr-ag~~lQiFnl~~k~klks~~~~e~----------VvfW 111 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP----ISADSAIMNPA-SKVIALK-AGKTLQIFNIEMKSKMKAHTMTDD----------VTFW 111 (1630)
T ss_pred ceEEEEECCCCCCccccc----ccchhhccCCC-cceEEEe-cCCeEEEeehHHhhhhcccccCCC----------ceEE
Confidence 368888887765443221 11123345676 5555554 378999999999888887766543 5555
Q ss_pred EeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeec--CCccEEEEEeccCCCCEEEEee-------CCCcEEEEecCC
Q 016032 123 DINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHR--KGSKVVGLHCNPIQPELLLSCG-------NDHFARIWDIRR 193 (396)
Q Consensus 123 ~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~-------~d~~i~~wd~~~ 193 (396)
.|-.... |+..+ +..|+.|++.....+.+....+. .+..|..-..++ +..+++..+ -.|.+.+|....
T Consensus 112 kWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 112 KWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred EecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeeccc
Confidence 5644433 33222 36899999976443333222221 134677788888 777766443 357899998864
Q ss_pred CCCCCccccCCCCCceeEEEEc--C-CCCEEEEEeC---CCcEEEEEcccc-cccCCCcceeecccccc---cCCceeEE
Q 016032 194 LEAGSSLCDLPHKRVVNSAYFS--P-SGSKILTTSQ---DNRLRIWDSIFG-NLDSPSREIVHSHDFNR---HLTPFRAE 263 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~--~-~~~~l~~~~~---d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~ 263 (396)
... +.+ -+|.+....+... + ...+++.+.. .+.++|-++... .-..+.........+.. .-.|+.+.
T Consensus 189 ~~s-Q~i--egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~ 265 (1630)
T 1xi4_A 189 KVS-QPI--EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (1630)
T ss_pred ccc-hhh--hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEE
Confidence 221 111 1343333222221 1 1222332222 368889888543 11111100000000000 11122233
Q ss_pred eCCCCCCCceeeEeeeeeeecccccccceEEEEcCccchhhhhc
Q 016032 264 WDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTGQLVAEVM 307 (396)
Q Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~~~~~~~~ 307 (396)
-++..+. -| .-+.-|.|.+||+.||.++..-+
T Consensus 266 vs~k~g~-------iy-----~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 266 ISEKHDV-------VF-----LITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eccccCE-------EE-----EEecCceEEEEecccchhhhhcc
Confidence 3332111 11 23566789999999999887644
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.61 E-value=0.21 Score=41.39 Aligned_cols=189 Identities=11% Similarity=-0.062 Sum_probs=92.3
Q ss_pred cEEEEEeCC----CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC----C-----CeEEEEECCCCccc
Q 016032 34 HILLSGDKK----GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS----D-----GTVSCTDLETGLAL 100 (396)
Q Consensus 34 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----d-----g~v~iwd~~~~~~~ 100 (396)
.+++.|+.+ ..+.+||..+..-...........-.+++.. + +.+++.|+. + ..+.+||+.+.+-.
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-G-GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-T-TEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-C-CEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 677777742 3688888876542222110011111122222 3 566666665 2 35888998876543
Q ss_pred ceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-----CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 101 SLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-----GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
..-..+.. ... ...+.+ ++..++.|+.+ ..+.+||+.+..-.... ...........+.+ ++.
T Consensus 104 ~~~~~p~~-----r~~--~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~ 170 (308)
T 1zgk_A 104 PCAPMSVP-----RNR--IGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PMLTRRIGVGVAVL---NRL 170 (308)
T ss_dssp ECCCCSSC-----CBT--CEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE---TTE
T ss_pred ECCCCCcC-----ccc--cEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECC-CCCccccceEEEEE---CCE
Confidence 32211111 110 112222 56666666543 46888998775422110 11111111122222 567
Q ss_pred EEEEeeCC-----CcEEEEecCCCCCCCccccCCCCC-ceeEEEEcCCCCEEEEEeCC-----CcEEEEEcccccc
Q 016032 176 LLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKR-VVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGNL 240 (396)
Q Consensus 176 ~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~ 240 (396)
+++.|+.+ ..+.+||+.+.+-. .+..+.... ....+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 77777654 45889998654321 111111111 1122233 67777777664 4688999876543
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.51 E-value=0.23 Score=41.98 Aligned_cols=163 Identities=10% Similarity=0.086 Sum_probs=88.9
Q ss_pred ceeEEEEecCCCcEEEEE------------eCCCeEEEEECCCCc-ccceeecCCCCCCCCCcceeeeEEEeCC--CCC-
Q 016032 66 IVNNIRFNPTNDGTVYAA------------SSDGTVSCTDLETGL-ALSLMNVNPNGWHGPRTWRMLYGMDINP--EKG- 129 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~------------~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~- 129 (396)
..-.+...|+ +..++++ ..+|.|.++|..+.. ....+......+. ...-....+.+.+ ++.
T Consensus 51 G~EDi~~~~~-G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~--~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 51 GSEDLEILPN-GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLD--ISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CCCEEEECTT-SEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCC--GGGCCEEEEEEEECTTCCE
T ss_pred CcceeEEcCC-CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCC--cCceeeeeeEEEECCCCcE
Confidence 4456667776 5444444 168999999987431 1222222110000 0011256666644 343
Q ss_pred EEEEE-ec--CCeEEEEeCCCCCCCccceeee--cCCccEEEEEeccCCCCEEEEee-----------------CCCcEE
Q 016032 130 VVLVA-DN--FGFLYLVDARTNSRSGEAILIH--RKGSKVVGLHCNPIQPELLLSCG-----------------NDHFAR 187 (396)
Q Consensus 130 ~l~~~-~~--~g~i~i~d~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~-----------------~d~~i~ 187 (396)
+|+++ .. +..|.+|++............. ..-...+.+.+.+ ++.++++.. ..|.|+
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 34444 33 4577787776543222222211 1223578999999 888777654 124555
Q ss_pred EEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccc
Q 016032 188 IWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIF 237 (396)
Q Consensus 188 ~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 237 (396)
-+|.. + ...+ ...-...+.++|+|+++.|+++. ..+.|..|++..
T Consensus 207 r~d~~--~-~~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 207 YYSPN--D-VRVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EECTT--C-CEEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEECC--e-EEEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 55542 1 1111 12234578999999998887665 567899999863
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.46 E-value=0.42 Score=42.06 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=68.3
Q ss_pred CCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeee--EecC-----CcccceeEEEEecC---C
Q 016032 7 IPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKI--VYGN-----IHSCIVNNIRFNPT---N 76 (396)
Q Consensus 7 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~-----~~~~~v~~~~~~~~---~ 76 (396)
++....+..+-..-...+.|+|.|+| +++++-...+.|++++..++.... .+.. ........|+|+|+ +
T Consensus 13 ~~~gf~~~~~a~~l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 13 KSENFDKKVILSNLNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp CCTTSCEEEEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS
T ss_pred CCCCeEEEEEECCCCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcC
Confidence 34445555555445577899999999 666654433468888765433221 1211 12456779999994 3
Q ss_pred CcEEEEEeC------------CCeEEEEECCCCc-----ccceee-cCCCCCCCCCcceeeeEEEeCCCCCEEEEEe
Q 016032 77 DGTVYAASS------------DGTVSCTDLETGL-----ALSLMN-VNPNGWHGPRTWRMLYGMDINPEKGVVLVAD 135 (396)
Q Consensus 77 ~~~l~s~~~------------dg~v~iwd~~~~~-----~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 135 (396)
+.+.++-+. ...|.-++...+. ....+. .+.. ..+ ....|+|.|+|.+.++.+
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~----~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSS----KDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCC----SSC--CEEEEEECTTSCEEEEEC
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCC----CCC--CCCeEeECCCCeEEEEEC
Confidence 555555442 2355556554321 111111 1111 111 278899999998777654
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.0091 Score=49.96 Aligned_cols=198 Identities=13% Similarity=-0.010 Sum_probs=101.4
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEe--cCCCcEEEEE-eCCCeEEEEECCCCcccceeecCCCCCC
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFN--PTNDGTVYAA-SSDGTVSCTDLETGLALSLMNVNPNGWH 111 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 111 (396)
+++.++.||.|.-.|..+++....+......++....-. +.++..++.. ..||.|..++..+|.....+..+.....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 688899999999999999998888753211233221100 1112333333 5799999999988855444332211000
Q ss_pred CCCcceeeeE---EEe-----CCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCC----ccEEEEEec----cCCCC
Q 016032 112 GPRTWRMLYG---MDI-----NPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKG----SKVVGLHCN----PIQPE 175 (396)
Q Consensus 112 ~~~~~~~v~~---~~~-----~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~----~~i~~~~~~----~~~~~ 175 (396)
.++.. ..+ ...+..+++|+.+|.+...|+++++...+........ ....|.... ...+.
T Consensus 92 -----SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~ 166 (339)
T 2be1_A 92 -----SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN 166 (339)
T ss_dssp -----CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC
T ss_pred -----cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC
Confidence 00110 000 0145678899999999999999987765432211110 000111110 01235
Q ss_pred EEEEeeCCCcEEEEecCCCCCCCcccc--C-CC--CCce-eEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 176 LLLSCGNDHFARIWDIRRLEAGSSLCD--L-PH--KRVV-NSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 176 ~l~~~~~d~~i~~wd~~~~~~~~~~~~--~-~~--~~~i-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
.++.+..+..+.+.+ ++++ .-.+.. . .. ...+ ..-..+.++.+ +.++.||.|..+|..+|..
T Consensus 167 ~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 167 MIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp EEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCE
T ss_pred eEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcE
Confidence 677777666666665 3221 100000 0 00 0000 00001124565 4578899999999887764
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.23 E-value=0.45 Score=40.01 Aligned_cols=155 Identities=13% Similarity=0.062 Sum_probs=82.4
Q ss_pred ccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC---CCEEEEE-e--cC
Q 016032 64 SCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE---KGVVLVA-D--NF 137 (396)
Q Consensus 64 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~-~--~~ 137 (396)
-.....|+|.|+ +.++++--..|.|++++...+........+.-. .........++++|+ +..|.+. + .+
T Consensus 31 L~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~---~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 31 LNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTELGEVPGVS---PSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCC---CBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeeecccCcee---ecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 345689999999 777666655899999986655432221111100 011123789999995 4445443 2 34
Q ss_pred CeEEEEeCCCCC----C---Cccceeee--cCCccEEEEEeccCCCCEEEEeeC-------------CCcEEEEecCCCC
Q 016032 138 GFLYLVDARTNS----R---SGEAILIH--RKGSKVVGLHCNPIQPELLLSCGN-------------DHFARIWDIRRLE 195 (396)
Q Consensus 138 g~i~i~d~~~~~----~---~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~-------------d~~i~~wd~~~~~ 195 (396)
+.|.-|.+.... . ...++... ........|.|.| ++.++++.+. .|.|.-.+....-
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 556666655421 1 11111111 1111345799999 8887777542 2444444443210
Q ss_pred C------CCccccCCCCCceeEEEEcCCCCEEEEE
Q 016032 196 A------GSSLCDLPHKRVVNSAYFSPSGSKILTT 224 (396)
Q Consensus 196 ~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 224 (396)
. ...+...++. ....++|+|+|.+.++=
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEe
Confidence 0 1112223443 35689999987765543
No 328
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.21 E-value=0.48 Score=40.12 Aligned_cols=195 Identities=13% Similarity=0.056 Sum_probs=96.9
Q ss_pred cCCeEEEEecCC---CCcEEEEEeCC-----CcEEEeecccc-----eeeeE-ec--CCcccceeEEEEecCCCcEEEEE
Q 016032 20 SRRVTCLEFHPT---NNHILLSGDKK-----GQVGVWDFYKV-----SEKIV-YG--NIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 20 ~~~v~~~~~~~~---~~~~l~s~~~d-----g~i~iwd~~~~-----~~~~~-~~--~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
......|+|+|+ +..+.++-... +.|..++.... +.+.. +. .+.......|+|.|+ +.++++.
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEE
Confidence 456889999998 43555554432 56777877642 11111 21 111123468999999 6655554
Q ss_pred eC-------------CCeEEEEECCCCcccceeecCCCCC-----CCCC----cceeeeEEEeCC-CCCEEEEEecCCe-
Q 016032 84 SS-------------DGTVSCTDLETGLALSLMNVNPNGW-----HGPR----TWRMLYGMDINP-EKGVVLVADNFGF- 139 (396)
Q Consensus 84 ~~-------------dg~v~iwd~~~~~~~~~~~~~~~~~-----~~~~----~~~~v~~~~~~~-~~~~l~~~~~~g~- 139 (396)
+. .|.|.-++... .... ...+ .... .......++|+| ++.++++-.....
T Consensus 153 G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~-----~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~ 226 (352)
T 2ism_A 153 GEVYERELAQDLASLGGKILRLTPEG-EPAP-----GNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGE 226 (352)
T ss_dssp CCTTCGGGGGCTTCSSSEEEEECTTS-SBCT-----TCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC---
T ss_pred CCCCCCccccCCCCCceEEEEEcCCC-CCCC-----CCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCC
Confidence 32 14555555432 1100 0000 0000 012367889999 5665554433332
Q ss_pred -------EEEEeCCCCCCC--------------ccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC-
Q 016032 140 -------LYLVDARTNSRS--------------GEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG- 197 (396)
Q Consensus 140 -------i~i~d~~~~~~~--------------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~- 197 (396)
|.+.. .+... ...............+++. ++.++++....+.|...++......
T Consensus 227 ~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~ 302 (352)
T 2ism_A 227 QGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRW 302 (352)
T ss_dssp ---CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEE
T ss_pred CCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcce
Confidence 44332 22100 0011111122245677773 6777777666777887777543210
Q ss_pred ---CccccCCCCCceeEEEEcCCCCEEEEEe
Q 016032 198 ---SSLCDLPHKRVVNSAYFSPSGSKILTTS 225 (396)
Q Consensus 198 ---~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (396)
.....+.....+..+++.|+|.++++..
T Consensus 303 ~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 303 RVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 0111112235688999999997766654
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.16 E-value=0.43 Score=39.54 Aligned_cols=192 Identities=9% Similarity=-0.016 Sum_probs=89.8
Q ss_pred CCCCcEEEEEeC----C-------CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCC--------CeEE
Q 016032 30 PTNNHILLSGDK----K-------GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSD--------GTVS 90 (396)
Q Consensus 30 ~~~~~~l~s~~~----d-------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--------g~v~ 90 (396)
.++ .+++.|+. + ..+.+||..+..-...........-.+++.. + +..++.|+.+ ..+.
T Consensus 44 ~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 44 KEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-L-NSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp TTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-T-TEEEEECCEESSTTCCBCCCEE
T ss_pred ECC-EEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-C-CEEEEEeCCcCCCCCcccceEE
Confidence 344 67777773 1 1267788776542221100011111122222 3 5666666632 4588
Q ss_pred EEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec------CCeEEEEeCCCCCCCccceeeecCCccE
Q 016032 91 CTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN------FGFLYLVDARTNSRSGEAILIHRKGSKV 164 (396)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~g~i~i~d~~~~~~~~~~~~~~~~~~~i 164 (396)
+||..+.+-...-..+.. .. -.+++. .++..++.|+. -..+.+||+.+..-.... .........
T Consensus 121 ~~d~~~~~W~~~~~~p~~-----r~---~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~ 190 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYV-----VY---GHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA-PMQTARSLF 190 (315)
T ss_dssp EEETTTTEEEECCCCSSC-----CB---SCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC-CCSSCCBSC
T ss_pred EECCCCCcEeECCCCCCc-----cc---ceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC-CCCCchhce
Confidence 899887654322211111 00 111222 35566677765 247899998875322110 111111111
Q ss_pred EEEEeccCCCCEEEEeeCCC-----cEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC-----------
Q 016032 165 VGLHCNPIQPELLLSCGNDH-----FARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN----------- 228 (396)
Q Consensus 165 ~~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------- 228 (396)
.++.+ ++.+++.|+.++ .+.+||+.+.+-. .+..+.....-.+++.. ++++++.|+.++
T Consensus 191 ~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~ 265 (315)
T 4asc_A 191 GATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKWA-PFEAFPQERSSLSLVSL-VGTLYAIGGFATLETESGELVPT 265 (315)
T ss_dssp EEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEEE-EECCCSSCCBSCEEEEE-TTEEEEEEEEEEEECTTSCEEEE
T ss_pred EEEEE---CCEEEEEeccCCCCccceEEEEECCCCeEE-ECCCCCCcccceeEEEE-CCEEEEECCccccCcCCcccccc
Confidence 22222 567777777654 5888998754321 11111111111122222 667777777532
Q ss_pred ---cEEEEEccccc
Q 016032 229 ---RLRIWDSIFGN 239 (396)
Q Consensus 229 ---~i~iwd~~~~~ 239 (396)
.+.+||+.+.+
T Consensus 266 ~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 266 ELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEETTTTE
T ss_pred ccCcEEEecCCCCh
Confidence 36677776544
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.13 E-value=0.18 Score=41.70 Aligned_cols=188 Identities=9% Similarity=-0.018 Sum_probs=91.2
Q ss_pred cEEEEEeC----C-----CcEEEeecccceeeeEec-CCcccceeEEEEecCCCcEEEEEeCC-----CeEEEEECCCCc
Q 016032 34 HILLSGDK----K-----GQVGVWDFYKVSEKIVYG-NIHSCIVNNIRFNPTNDGTVYAASSD-----GTVSCTDLETGL 98 (396)
Q Consensus 34 ~~l~s~~~----d-----g~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~ 98 (396)
.+++.|+. + ..+.+||..+..-..... ....... +++.. + +.+++.|+.+ ..+.+||+.+.+
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI-D-GHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE-T-TEEEEECCEETTEECCCEEEEETTTTE
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE-C-CEEEEEcCCCCCcccccEEEECCCCCe
Confidence 67777765 2 468888887654222111 1111111 22222 3 5666666543 358889988765
Q ss_pred ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-----CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCC
Q 016032 99 ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-----GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQ 173 (396)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 173 (396)
-...-..+.. .. ...++.+ ++..++.|+.+ ..+.+||+.+..-.... ...........+.+ +
T Consensus 149 W~~~~~~p~~-----r~--~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~ 215 (308)
T 1zgk_A 149 WHLVAPMLTR-----RI--GVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVL---H 215 (308)
T ss_dssp EEECCCCSSC-----CB--SCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE---T
T ss_pred EeECCCCCcc-----cc--ceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-CCCCccccceEEEE---C
Confidence 4332221111 10 0112222 56666776654 46889998775422110 11111111222222 5
Q ss_pred CCEEEEeeCC-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCC-----CcEEEEEccccc
Q 016032 174 PELLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQD-----NRLRIWDSIFGN 239 (396)
Q Consensus 174 ~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 239 (396)
+.+++.|+.+ ..+.+||+.+.+-. .+..+.....-.+++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 6777777764 46899998764321 11111111111122222 66777777754 357778876543
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.99 E-value=0.62 Score=39.45 Aligned_cols=153 Identities=9% Similarity=-0.004 Sum_probs=76.7
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC---CCEEEEEe-c----
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE---KGVVLVAD-N---- 136 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~---- 136 (396)
.....|+|.|+ +..|+.+...|.|++++.. +.....+....... .........++++|+ +..|.++. .
T Consensus 18 ~~P~~i~~~pd-G~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~--~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 18 DHPWALAFLPD-NHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVW--AHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SSEEEEEECST-TCCEEEEETTTEEEEEETT-TEECCCCBSCCCCC--CSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCcEEEEEcCC-CCEEEEEeCCceEEEEeCC-CceeeEecCCcccc--cCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 34688999998 7734455668999999853 33211111000000 001122688999996 45555443 2
Q ss_pred ---CCeEEEEeCCCCCC-C---ccceee-e---cCCccEEEEEeccCCCCEEEEeeCC-------------CcEEEEecC
Q 016032 137 ---FGFLYLVDARTNSR-S---GEAILI-H---RKGSKVVGLHCNPIQPELLLSCGND-------------HFARIWDIR 192 (396)
Q Consensus 137 ---~g~i~i~d~~~~~~-~---~~~~~~-~---~~~~~i~~~~~~~~~~~~l~~~~~d-------------~~i~~wd~~ 192 (396)
...|..+++..... . ..+... . ........|+|.| ++.++++.+.. |.|.-++..
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 23566666543210 0 011111 0 0111245799999 88766665432 456666654
Q ss_pred CCCC-----------CCccccCCCCCceeEEEEcC-CCCEEEE
Q 016032 193 RLEA-----------GSSLCDLPHKRVVNSAYFSP-SGSKILT 223 (396)
Q Consensus 193 ~~~~-----------~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 223 (396)
..-. ...+...++ .....++|+| ++.++++
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 2100 011111233 3467899999 5654443
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.97 E-value=0.65 Score=40.86 Aligned_cols=115 Identities=10% Similarity=0.187 Sum_probs=61.5
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC---CCEEEEEec-----
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE---KGVVLVADN----- 136 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~----- 136 (396)
.....|+|.|+ +.++++-...+.|++++..++........... .........+..++|+|+ +..|.++..
T Consensus 27 ~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~-~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEI-VNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTC-CCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCcc-ccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 35679999999 77666654445788887655544322222211 100011123779999996 555555442
Q ss_pred --------CCeEEEEeCCCCC--C--Ccccee-ee-cCCccEEEEEeccCCCCEEEEeeC
Q 016032 137 --------FGFLYLVDARTNS--R--SGEAIL-IH-RKGSKVVGLHCNPIQPELLLSCGN 182 (396)
Q Consensus 137 --------~g~i~i~d~~~~~--~--~~~~~~-~~-~~~~~i~~~~~~~~~~~~l~~~~~ 182 (396)
...|.-++..... . ...++. .. ........|+|.| ++.++++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 2355555543221 0 011111 11 1112578999999 8887777543
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.94 E-value=0.71 Score=46.28 Aligned_cols=201 Identities=9% Similarity=0.061 Sum_probs=116.5
Q ss_pred EEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC-cccceee
Q 016032 26 LEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG-LALSLMN 104 (396)
Q Consensus 26 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~ 104 (396)
.-.+|.. +++|.=. ..++.|+|+++........ ...+|.-=.|-.. +.|+-.+ +..|.-|++... .+...+.
T Consensus 71 AIMnP~~-~iiALra-g~~lQiFnl~~k~klks~~--~~e~VvfWkWis~--~~l~lVT-~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 71 AIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hccCCCc-ceEEEec-CCeEEEeehHHhhhhcccc--cCCCceEEEecCC--CeeEEEc-CCeEEEeccCCCCccHHHHh
Confidence 3457766 5666554 6789999999877776654 4567877788754 4444444 567999999742 3433443
Q ss_pred cCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-------cCCeEEEEeCCCCCCCccceeeecCCccEEEEEe--ccCCCC
Q 016032 105 VNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-------NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHC--NPIQPE 175 (396)
Q Consensus 105 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~ 175 (396)
.+..- . ...|..-..+++.+.++..+ -.|.+.+|..+.... +.+.+|.. ....+.. .+....
T Consensus 144 R~~~L-~----~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--Q~iegha~--~F~~~~~~~~~~~~~ 214 (1630)
T 1xi4_A 144 RHSSL-A----GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAA--SFAQFKMEGNAEEST 214 (1630)
T ss_pred cchhc-c----cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--hhhhHhHh--hhheeccCCCCCCce
Confidence 32211 1 12366667778877766542 347889998876432 11122211 1111111 111112
Q ss_pred EEEEeeC---CCcEEEEecCCC-CCCCccc-------cC--CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccC
Q 016032 176 LLLSCGN---DHFARIWDIRRL-EAGSSLC-------DL--PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 176 ~l~~~~~---d~~i~~wd~~~~-~~~~~~~-------~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 242 (396)
+++.+.. .+.+.|-++... .....+. .. ....-..++..++....+..-+.-|.|.+||+.++.++-
T Consensus 215 l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 215 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 2222221 268888888543 1111111 00 123445678888877888888999999999999998753
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.91 E-value=0.88 Score=40.61 Aligned_cols=239 Identities=13% Similarity=0.157 Sum_probs=128.3
Q ss_pred EEEEEeCCCcEEEeecccceeeeEecCC------------------------cccceeEEEEecCC----CcEEEEEe-C
Q 016032 35 ILLSGDKKGQVGVWDFYKVSEKIVYGNI------------------------HSCIVNNIRFNPTN----DGTVYAAS-S 85 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~~v~~~~~~~~~----~~~l~s~~-~ 85 (396)
.+.||+..|.|+|+-+.+.+.+..+.-- ..+......+|..+ +++|+.-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 4778999999999999988776664210 01111112222111 45666655 4
Q ss_pred CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeC--CCCCEEEEEecC-------CeE------------EEEe
Q 016032 86 DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDIN--PEKGVVLVADNF-------GFL------------YLVD 144 (396)
Q Consensus 86 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~-------g~i------------~i~d 144 (396)
...|-.-++...++...+..+... .+..+.+- |+-.+++++++. |.. ...|
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~--------~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD 223 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQ--------AIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAID 223 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCS--------CEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCc--------CcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEc
Confidence 667888888888887777665432 26777775 677888877543 211 0112
Q ss_pred CCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC---------------CcEEEEecC-----------------
Q 016032 145 ARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND---------------HFARIWDIR----------------- 192 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------~~i~~wd~~----------------- 192 (396)
..+.+...+... .+..-.....+ ++.+.++.+.+ ..+.++++.
T Consensus 224 ~~tm~v~~Qv~v----~gnld~~~~~~-~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~ 298 (638)
T 3sbq_A 224 AETMEMAFQVIV----DGNLDNTDADY-TGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDS 298 (638)
T ss_dssp TTTCSEEEEEEE----SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTC
T ss_pred CCccEEEEEEEc----CCChhhcCCCC-CCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCC
Confidence 222111111100 01122233344 45555554432 124444432
Q ss_pred --------CCCC--CCccccCCCCCceeEEEEcCCCCEEEEEe-CCCcEEEEEccccc------ccCCCcceeecccccc
Q 016032 193 --------RLEA--GSSLCDLPHKRVVNSAYFSPSGSKILTTS-QDNRLRIWDSIFGN------LDSPSREIVHSHDFNR 255 (396)
Q Consensus 193 --------~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~~ 255 (396)
.... ...+..+.-......+..+|+|+++++++ .+.++.++|++.-. ++.+..... ....-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~--ae~e~ 376 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIV--GEPEL 376 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEE--ECCBC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceE--eeccC
Confidence 1000 00111112233456788999999987766 47899999998422 222222222 22234
Q ss_pred cCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcCcc
Q 016032 256 HLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDITTG 300 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~~~ 300 (396)
...|+..+|+++ |.... +---|.+|.-|++...
T Consensus 377 GlGPlHt~Fd~~---------G~aYT---tlfidSqvvkWni~~a 409 (638)
T 3sbq_A 377 GLGPLHTTFDGR---------GNAYT---TLFIDSQVVKWNMEEA 409 (638)
T ss_dssp CSCEEEEEECSS---------SEEEE---EETTTTEEEEEEHHHH
T ss_pred CCcccEEEECCC---------CceEe---eeeecceEEEEeccHH
Confidence 566778899987 53333 3456788999998653
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.62 E-value=0.69 Score=43.32 Aligned_cols=197 Identities=9% Similarity=0.058 Sum_probs=98.3
Q ss_pred cEEEEEeCC----CcEEEeecccceeeeEe-c-----CCcccceeEEEEec-CCCcEEEEEeCC------CeEEEEECCC
Q 016032 34 HILLSGDKK----GQVGVWDFYKVSEKIVY-G-----NIHSCIVNNIRFNP-TNDGTVYAASSD------GTVSCTDLET 96 (396)
Q Consensus 34 ~~l~s~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~l~s~~~d------g~v~iwd~~~ 96 (396)
.+++.|+.+ ..+.+||..+..-.... . ......-.+++..+ + +..++.|+.+ ..+.+||..+
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~-~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN-NQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT-TEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC-CEEEEEcCCCCCCCccccEEEEeCCC
Confidence 677888753 45888888765422222 0 00111112333333 4 6777777653 3578888887
Q ss_pred CcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCC--eEEEEeCCCCCCCcccee--eecCCccEEEEEeccC
Q 016032 97 GLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFG--FLYLVDARTNSRSGEAIL--IHRKGSKVVGLHCNPI 172 (396)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g--~i~i~d~~~~~~~~~~~~--~~~~~~~i~~~~~~~~ 172 (396)
.+-...-..+.. ..-.+++...++..++.|+.++ .+.+||+.+......... .........++.+...
T Consensus 478 ~~W~~~~~~p~~--------R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 478 REWSMIKSLSHT--------RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp TEEEECCCCSBC--------CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred CcEEECCCCCCC--------cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 644332111111 1122333334788888887654 799999987542211100 0111111223444541
Q ss_pred CCCEEEEeeC--C-----CcEEEEecCCCCC-----CCccccC-CCCCceeEEEEcCCCCEEEEEeCC--------CcEE
Q 016032 173 QPELLLSCGN--D-----HFARIWDIRRLEA-----GSSLCDL-PHKRVVNSAYFSPSGSKILTTSQD--------NRLR 231 (396)
Q Consensus 173 ~~~~l~~~~~--d-----~~i~~wd~~~~~~-----~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~ 231 (396)
.+.+++.|+. + ..+.+||+.+..- -..+... .....-.+++...++++++.|+.+ ..+.
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 2667777765 2 4588999876551 0111110 001111122233336777777742 4578
Q ss_pred EEEccccc
Q 016032 232 IWDSIFGN 239 (396)
Q Consensus 232 iwd~~~~~ 239 (396)
+||+.+.+
T Consensus 630 ~yd~~t~~ 637 (695)
T 2zwa_A 630 SLDPLSET 637 (695)
T ss_dssp EEETTTTE
T ss_pred EEECCCCe
Confidence 88887654
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.60 E-value=0.81 Score=37.93 Aligned_cols=148 Identities=12% Similarity=0.117 Sum_probs=71.2
Q ss_pred CcEEEEEeCC-------CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec------CCeEEEE
Q 016032 77 DGTVYAASSD-------GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN------FGFLYLV 143 (396)
Q Consensus 77 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~g~i~i~ 143 (396)
+.+++.|+.+ ..+.+||+.+.+-...-..+.. ..-.+++. .++..++.|+. ...+.+|
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--------r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--------VYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--------EESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--------ccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 6677777653 3578888887654332211111 00112222 35666666653 2468999
Q ss_pred eCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCC-----CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCC
Q 016032 144 DARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGND-----HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSG 218 (396)
Q Consensus 144 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 218 (396)
|+.+..-.... ......... +++.. ++.+++.|+.+ ..+.+||+.+.+-. .+..+.....-.+++. .++
T Consensus 181 d~~~~~W~~~~-~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~ 254 (318)
T 2woz_A 181 NPKKGDWKDLA-PMKTPRSMF-GVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMTEFPQERSSISLVS-LAG 254 (318)
T ss_dssp ETTTTEEEEEC-CCSSCCBSC-EEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECCCCSSCCBSCEEEE-ETT
T ss_pred cCCCCEEEECC-CCCCCcccc-eEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE-ECCCCCCcccceEEEE-ECC
Confidence 99875422110 111111111 22222 56777777643 35778888754321 1111111111112222 256
Q ss_pred CEEEEEeCC--------------CcEEEEEccccc
Q 016032 219 SKILTTSQD--------------NRLRIWDSIFGN 239 (396)
Q Consensus 219 ~~l~~~~~d--------------~~i~iwd~~~~~ 239 (396)
++++.|+.+ ..+.+||+.+.+
T Consensus 255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 677777653 346677776543
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.52 E-value=0.41 Score=40.50 Aligned_cols=54 Identities=7% Similarity=-0.138 Sum_probs=25.9
Q ss_pred cEEEEecCCCCCCCccccCCCC-CceeEEEEcCCCCEEEEEeCCC------cEEEEEccccccc
Q 016032 185 FARIWDIRRLEAGSSLCDLPHK-RVVNSAYFSPSGSKILTTSQDN------RLRIWDSIFGNLD 241 (396)
Q Consensus 185 ~i~~wd~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~ 241 (396)
.+.+||+.+.+-. .+..+... ..-.++. .++++++.|+.++ .|.++++++++..
T Consensus 286 ~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWD-KSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CE-EEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCcee-eCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 5778998754321 12112111 1112222 3677888888643 3556687776653
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.50 E-value=0.64 Score=39.30 Aligned_cols=65 Identities=8% Similarity=-0.139 Sum_probs=33.1
Q ss_pred cEEEEEeCC-CcEEEeecccceeeeEecCC-c--ccceeEEEEecCCCcEEEEEeC-C---------CeEEEEECCCCcc
Q 016032 34 HILLSGDKK-GQVGVWDFYKVSEKIVYGNI-H--SCIVNNIRFNPTNDGTVYAASS-D---------GTVSCTDLETGLA 99 (396)
Q Consensus 34 ~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~-~--~~~v~~~~~~~~~~~~l~s~~~-d---------g~v~iwd~~~~~~ 99 (396)
++++.|+.+ ..+.++|..+.......... . ...-.+++.. + +.+++.|+. + ..+.+||+.+.+-
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-D-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-T-TEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-C-CEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 677777653 46888888641111111110 1 1111122222 3 566666665 2 3588899887654
Q ss_pred c
Q 016032 100 L 100 (396)
Q Consensus 100 ~ 100 (396)
.
T Consensus 99 ~ 99 (357)
T 2uvk_A 99 V 99 (357)
T ss_dssp E
T ss_pred E
Confidence 3
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.42 E-value=0.94 Score=37.53 Aligned_cols=145 Identities=12% Similarity=0.011 Sum_probs=68.3
Q ss_pred cEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC----CC-------eEEEEECCCCcccce
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS----DG-------TVSCTDLETGLALSL 102 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg-------~v~iwd~~~~~~~~~ 102 (396)
.+++.|+. .+..||..+.+-...................+ +.+++.|+. ++ .+.+||..+.+-...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 45566654 37889988765332211111111122222334 677777773 12 277788877654332
Q ss_pred eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC-------CeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCC
Q 016032 103 MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF-------GFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPE 175 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 175 (396)
-..+.. .. -.+++.. ++..++.|+.+ ..+.+||+.+..-.... ......... +++. . ++.
T Consensus 94 ~~~p~~-----r~---~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~-~~~~-~-~~~ 160 (318)
T 2woz_A 94 PPLPSA-----RC---LFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGH-NVIS-H-NGM 160 (318)
T ss_dssp SCBSSC-----BC---SCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESC-EEEE-E-TTE
T ss_pred CCCCcc-----cc---ccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCccccc-EEEE-E-CCE
Confidence 211111 10 1112221 56667777653 35788888775422110 000000011 1222 2 567
Q ss_pred EEEEeeC------CCcEEEEecCCC
Q 016032 176 LLLSCGN------DHFARIWDIRRL 194 (396)
Q Consensus 176 ~l~~~~~------d~~i~~wd~~~~ 194 (396)
+++.|+. -..+.+||+.+.
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEcCCCCCCCccceEEEEcCCCC
Confidence 7777764 235888888653
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.82 E-value=1.8 Score=37.46 Aligned_cols=201 Identities=8% Similarity=0.076 Sum_probs=124.7
Q ss_pred EEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCC-ccccee
Q 016032 25 CLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETG-LALSLM 103 (396)
Q Consensus 25 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~ 103 (396)
+.-.+|.. +++|.=. ..++.|+|+++........ ....|..=.|-.. +.|+-.+ +..|.-|++... .+...+
T Consensus 70 sAIMnP~~-~iiALra-g~~lQiFnle~K~klks~~--~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEEECSSS-SCEEEEE-TTEEEEEETTTTEEEEEEE--CSSCCCEEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEE
T ss_pred eeeeCCCC-cEEEEec-CCeEEEEchHHhhhhccee--cCCCceEEEecCC--CeEEEEc-CCeeEEecccCCCCchhhe
Confidence 45567876 5666654 5789999999988777764 5567888888764 4555554 568999999753 344444
Q ss_pred ecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe-------cCCeEEEEeCCCCCCCccceeeecCCccEEEEEec--cCCC
Q 016032 104 NVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD-------NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCN--PIQP 174 (396)
Q Consensus 104 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~ 174 (396)
..+..- . ...|..-..+++.+.++..+ -.|.+.+|..+.... + ...+|......+... +...
T Consensus 143 dR~~~L-~----~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--Q--~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 143 DRHSSL-A----GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--Q--PIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp ECCGGG-T----TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE--E--EECCSEEEEEEEECTTCSSEE
T ss_pred ecchhc-c----cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc--c--hheeeeeeeEEEecCCCCCCc
Confidence 433221 1 13477777888888776543 236888998876432 1 223332222222222 1011
Q ss_pred CEEEEeeC---CCcEEEEecCCCC-CCCcccc------C---CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccccccc
Q 016032 175 ELLLSCGN---DHFARIWDIRRLE-AGSSLCD------L---PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLD 241 (396)
Q Consensus 175 ~~l~~~~~---d~~i~~wd~~~~~-~~~~~~~------~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 241 (396)
.+++.+.. .+.+.+-++.... ....+.. + ...+-..++..++....++.-+.-|.|++||+.++.++
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 23333333 2789999885431 1111110 0 23455678899998889999999999999999999874
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.45 E-value=3.4 Score=39.11 Aligned_cols=198 Identities=10% Similarity=0.051 Sum_probs=108.3
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcc
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLA 99 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (396)
...|.+|.-..+| +|-.|..+| +..||-................|.++....+ ..|..++.+| +..||..+.+.
T Consensus 21 ~n~V~~I~qD~~G--~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~--g~lWigT~~G-l~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEG--LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDN--TYLYMGTDNG-ILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTS--CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETT--TEEEEEETTE-EEEEETTTTEE
T ss_pred cceEEEEEECCCC--CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCC--CcEEEEeCCC-eEEEeCCCCEE
Confidence 4679999998888 355566666 5567643321111111112456888877664 4666666665 78899877543
Q ss_pred cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc-ceeeecCCccEEEEEeccCCCCEEE
Q 016032 100 LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE-AILIHRKGSKVVGLHCNPIQPELLL 178 (396)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~ 178 (396)
.. .... . ...|.++.. .++ .|..++.+ .+..+|..+.....- ..........|.++.... ++.+.+
T Consensus 95 ~~----~~~~---~--~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi 161 (758)
T 3ott_A 95 EQ----PETD---F--PTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK-DNQIYV 161 (758)
T ss_dssp CC----CSCC---C--CSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-TCCEEE
T ss_pred EC----cccC---C--CceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-CCCEEE
Confidence 22 1000 0 012555544 344 56666665 688888866432110 000001123588888876 666554
Q ss_pred EeeCCCcEEEEecCCCCCCCccccCC----CCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 179 SCGNDHFARIWDIRRLEAGSSLCDLP----HKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 179 ~~~~d~~i~~wd~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
++.. -|..++..+.... .+.... ....|.++...+++..|..|+. +-+..+|..+++.
T Consensus 162 -gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 162 -GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp -EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred -EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 4444 4777886543211 111000 1234888888877776666664 4588888776543
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.26 Score=41.21 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=63.4
Q ss_pred CEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCCCCCCceeeEeeeeeeecccccccceEEEEcC
Q 016032 219 SKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDIT 298 (396)
Q Consensus 219 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~d~~i~vwd~~ 298 (396)
.++++++.||.|.-+|..+|+..-..... ...+....-.+... ..+..++. ....||.|..++..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--------~~~p~~~~~~~~~~-----~~~~~~vv--~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--------NFQPLIEIQEPSRL-----ETYETLII--EPFGDGNIYYFNAH 75 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--------GSCCSEECCCSCTT-----TSSEEEEE--CCSTTTEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--------ccCCcEEecCCccc-----cCCcEEEE--EECCCCEEEEEECC
Confidence 36888889999999999888764321110 00000000000000 01222220 12578888888888
Q ss_pred ccchhhhhcCCCCCCCcceeeec-----------cCCcEEEeec-CCcEEEEcCCCcceeeecccc
Q 016032 299 TGQLVAEVMDPNITTISPVNKLH-----------PRDDVLASGS-SRSIFIWRPKEKSELVEQKEE 352 (396)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~~~ 352 (396)
+|.....+..+.......+ ... ..+..+++|+ +|.+.-.|+.+|+.+.++...
T Consensus 76 ~G~~~~~~~~~~lv~~SP~-~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 76 QGLQKLPLSIRQLVSTSPL-HLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TEEEEEEEEHHHHHTTCSE-EEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCcEEeeeccccceecccc-ccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 7754332221110111111 110 1455677788 999999999999998887654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.07 E-value=2.6 Score=39.41 Aligned_cols=156 Identities=10% Similarity=0.051 Sum_probs=77.6
Q ss_pred CCCcEEEEEeCCC------cEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCC--eEEEEECCCCcccce
Q 016032 31 TNNHILLSGDKKG------QVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDG--TVSCTDLETGLALSL 102 (396)
Q Consensus 31 ~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~ 102 (396)
++ ++++.|+.++ .+.+||..+..-...-.......-.+++...+ +.+++.|+.++ .+.+||..+..-...
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~-~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPD-GNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTT-SCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcC-CEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 45 6777777543 47788887643222111001111122233234 77788877654 689999888654322
Q ss_pred eecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEec-------CCeEEEEeCCCCCC-----Cccceee-ecCCccEEEEE
Q 016032 103 MNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADN-------FGFLYLVDARTNSR-----SGEAILI-HRKGSKVVGLH 168 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~-------~g~i~i~d~~~~~~-----~~~~~~~-~~~~~~i~~~~ 168 (396)
-..... .... ....++.+..+ +..++.|+. ...+..||+.+... ....... .........+.
T Consensus 529 ~~~g~~--p~~r--~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~ 604 (695)
T 2zwa_A 529 TPKDEF--FQNS--LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY 604 (695)
T ss_dssp CCSSGG--GGSC--CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE
T ss_pred cCCCCC--CCcc--cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE
Confidence 110000 0000 11223445554 566777755 24689999988662 1111010 01111122222
Q ss_pred eccCCCCEEEEeeC--------CCcEEEEecCCC
Q 016032 169 CNPIQPELLLSCGN--------DHFARIWDIRRL 194 (396)
Q Consensus 169 ~~~~~~~~l~~~~~--------d~~i~~wd~~~~ 194 (396)
+. ++.+++.|+. ...|.+||+.+.
T Consensus 605 ~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 605 IT--PRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EE--TTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred eC--CCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 22 3677777774 346899998754
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.54 E-value=7.2 Score=36.88 Aligned_cols=201 Identities=11% Similarity=0.081 Sum_probs=104.2
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.|.++...+++. .|-.|.. +-+..++..+....... ......|.++...++ +. |..|+.+ -+.+++..++....
T Consensus 192 ~i~~i~~d~~~~-~lWigt~-~Gl~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~-g~-lWigT~~-Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDTTRQ-CVWIGTE-GYLFQYFPSTGQIKQTE-AFHNNSIKSLALDGN-GD-LLAGTDN-GLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEETTTT-EEEEEEE-EEEEEEETTTTEEEEEE-EEEEEEEEEEEECTT-CC-EEEEETT-EEEEECCTTSCCEE
T ss_pred eeEEEEEECCCC-EEEEEEC-CCCeEEcCCCCeEEecc-CCCCCeEEEEEEcCC-CC-EEEEeCC-ceeEEecCCCcEEE
Confidence 488888877663 3333443 35778887665432221 113446888887765 44 4445544 47788877654322
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceee-----ecCCccEEEEEeccCCCCE
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILI-----HRKGSKVVGLHCNPIQPEL 176 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~ 176 (396)
..........- ....|.++....++.+. .|+..| +.++.... . ...... ......|.++.... ++.+
T Consensus 266 ~~~~~~~~~~l--~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~~--~-~~~~~~~~~~~~~~~~~v~~i~~D~-~g~l 337 (758)
T 3ott_A 266 IIHDSRNIQSL--TNNIIWNIFADQEHNIW-LGTDYG-ISLSRYNS--A-LQFIPISQITGTGDGNQFYSLFRDS-KGFY 337 (758)
T ss_dssp ECCCTTCTTSC--SCSCEEEEEECTTCCEE-EEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECT-TCCE
T ss_pred EEcCCCCcCcC--CcCeEEEEEEcCCCCEE-EEeCCc-ccccccCC--c-eeEEecccCCCCCCCceEEEEEEcC-CCCE
Confidence 21111110000 11238888888777754 455556 54443221 1 111110 01123588888776 6665
Q ss_pred EEEeeCCCcEEEEecCCCCCCC--cccc-----CCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccccc
Q 016032 177 LLSCGNDHFARIWDIRRLEAGS--SLCD-----LPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNL 240 (396)
Q Consensus 177 l~~~~~d~~i~~wd~~~~~~~~--~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 240 (396)
.+ |+.+| +..++..+..... .... .-....|.++.-..+|.+.+ |+ ++-|..||..+++.
T Consensus 338 Wi-Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~ 404 (758)
T 3ott_A 338 WF-GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQF 404 (758)
T ss_dssp EE-EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEE
T ss_pred EE-eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcE
Confidence 44 44554 6666654321111 0100 01234588888888876544 55 45789999877654
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.08 E-value=4.8 Score=33.79 Aligned_cols=216 Identities=12% Similarity=0.058 Sum_probs=111.2
Q ss_pred eeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeE--e---cCCcccceeEEEEecC---CCcEEEEE-
Q 016032 13 CAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIV--Y---GNIHSCIVNNIRFNPT---NDGTVYAA- 83 (396)
Q Consensus 13 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~---~~~~~~~v~~~~~~~~---~~~~l~s~- 83 (396)
+..+-..-...+.|+|.|+| +++++--..|.|++++..++..... + ..........|+|+|+ ++.+.++-
T Consensus 24 ~~~va~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 34454555678899999999 6666655489999998654433211 1 1123456899999984 23333332
Q ss_pred -eCCCeEEEEECCCCc--------ccceee-cCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-------------CCeE
Q 016032 84 -SSDGTVSCTDLETGL--------ALSLMN-VNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-------------FGFL 140 (396)
Q Consensus 84 -~~dg~v~iwd~~~~~--------~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------~g~i 140 (396)
..++.|.-|.+..+. ....+. .+. ...+ ....|.|.|+|.++++.+. .|.|
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~----~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK----GVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC----CSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC----CCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence 235566666665421 111111 111 1111 1567999999987776432 3566
Q ss_pred EEEeCCCCCCC-----ccceeeecCCccEEEEEeccCCCCEEEEee-CCCcEEEEecCCCCC---------------CCc
Q 016032 141 YLVDARTNSRS-----GEAILIHRKGSKVVGLHCNPIQPELLLSCG-NDHFARIWDIRRLEA---------------GSS 199 (396)
Q Consensus 141 ~i~d~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~---------------~~~ 199 (396)
.-++....-.. ...+....+. ....++|+| ++.++++-. .++.=.|--+..+.. ...
T Consensus 177 lRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P 254 (347)
T 3das_A 177 LRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDP 254 (347)
T ss_dssp EEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCC
T ss_pred EEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCC
Confidence 65665432100 0111122222 466899999 777666532 233222222222111 011
Q ss_pred cccCCCC-CceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 200 LCDLPHK-RVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 200 ~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
+..+.+. .....++|. ++.++...-..+.|....+...
T Consensus 255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~ 293 (347)
T 3das_A 255 VAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGT 293 (347)
T ss_dssp SEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETT
T ss_pred cEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCC
Confidence 1111122 345677776 4555555555556666666543
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.88 E-value=3.2 Score=37.17 Aligned_cols=75 Identities=11% Similarity=0.021 Sum_probs=52.6
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeeccccee-----------eeEecCCcccceeEEEEecCCCcEEEEEeCCCeE
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSE-----------KIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTV 89 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v 89 (396)
.....+.++|||..++++|--+.++.|+|+..... ...-...-.-.....+|.++ +....+.--|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~-G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGR-GNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSS-SEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCC-CceEeeeeecceE
Confidence 34556889999966666666789999999985211 11111223456788899998 7555666679999
Q ss_pred EEEECCC
Q 016032 90 SCTDLET 96 (396)
Q Consensus 90 ~iwd~~~ 96 (396)
..|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999975
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.40 E-value=6.5 Score=34.60 Aligned_cols=108 Identities=10% Similarity=0.179 Sum_probs=58.8
Q ss_pred eeEEEeCCCCC-EEEEEecCCeEEEEeCCCCCCCcccee----ee-----cCCccEEEEEeccC---CCCEEEEeeC--C
Q 016032 119 LYGMDINPEKG-VVLVADNFGFLYLVDARTNSRSGEAIL----IH-----RKGSKVVGLHCNPI---QPELLLSCGN--D 183 (396)
Q Consensus 119 v~~~~~~~~~~-~l~~~~~~g~i~i~d~~~~~~~~~~~~----~~-----~~~~~i~~~~~~~~---~~~~l~~~~~--d 183 (396)
...|+|.|++. .++++...|.|++++............ .. ........|+++|. ++.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 67899999986 566777889999997543211111111 11 01235789999982 2344444332 1
Q ss_pred ----------CcEEEEecCCCC-------CCCccccC---CCCCceeEEEEcCCCCEEEEEeC
Q 016032 184 ----------HFARIWDIRRLE-------AGSSLCDL---PHKRVVNSAYFSPSGSKILTTSQ 226 (396)
Q Consensus 184 ----------~~i~~wd~~~~~-------~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~ 226 (396)
..|.-|.+.... ..+.+... ........|+|.|||.+.++.+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 134445553210 11111111 12234678999999987776554
No 348
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.27 E-value=7.8 Score=32.95 Aligned_cols=146 Identities=8% Similarity=0.112 Sum_probs=84.4
Q ss_pred eEEEEECCCC--cccceeecCCCCCCCCCcceeeeEEEeC---CC----CCEEEEEe-cCCeEEEEeCCCCCCCccce--
Q 016032 88 TVSCTDLETG--LALSLMNVNPNGWHGPRTWRMLYGMDIN---PE----KGVVLVAD-NFGFLYLVDARTNSRSGEAI-- 155 (396)
Q Consensus 88 ~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~----~~~l~~~~-~~g~i~i~d~~~~~~~~~~~-- 155 (396)
.|.+||+.++ +.++.+.++....... ..+..+.+. |. +.++..+. ..+.|.++|+.+++......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~---S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~ 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKP---TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCG---GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccC---CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC
Confidence 5889999999 9999888865543321 236777776 22 34444443 45689999998764322110
Q ss_pred -eee--------c----CCccEEEEEeccCC----CCEEEEeeCCC-cEEEEe---cCCCCCCCccccCCCC---CceeE
Q 016032 156 -LIH--------R----KGSKVVGLHCNPIQ----PELLLSCGNDH-FARIWD---IRRLEAGSSLCDLPHK---RVVNS 211 (396)
Q Consensus 156 -~~~--------~----~~~~i~~~~~~~~~----~~~l~~~~~d~-~i~~wd---~~~~~~~~~~~~~~~~---~~i~~ 211 (396)
... . -...+..|+++| + ++.|.-....+ .++--. ++.......+..++.. ..-..
T Consensus 201 ~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~ 279 (381)
T 3q6k_A 201 FKAERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIA 279 (381)
T ss_dssp GSCCSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEE
T ss_pred CccccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcce
Confidence 000 0 013588899998 5 55555554433 233222 2222222223333322 23345
Q ss_pred EEEc-CCCCEEEEEeCCCcEEEEEccc
Q 016032 212 AYFS-PSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 212 ~~~~-~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
+++. .+|.++++--..+.|..|+..+
T Consensus 280 ~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 280 LAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 6775 5787777777888999999864
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.45 E-value=12 Score=33.00 Aligned_cols=112 Identities=10% Similarity=0.015 Sum_probs=60.9
Q ss_pred cCCeEEEEecCCCC-cEEEEEeCCCcEEEeecccce---eeeEec----C----CcccceeEEEEecC---CCcEEEEEe
Q 016032 20 SRRVTCLEFHPTNN-HILLSGDKKGQVGVWDFYKVS---EKIVYG----N----IHSCIVNNIRFNPT---NDGTVYAAS 84 (396)
Q Consensus 20 ~~~v~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~---~~~~~~----~----~~~~~v~~~~~~~~---~~~~l~s~~ 84 (396)
-..-+.|+|.|++. ++|+ +...|.|++++..... .+..+. . ........|+|+|+ ++.+.++-+
T Consensus 13 L~~P~~~a~~pdG~~rl~V-~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFI-LEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp ESSEEEEECCSSSSCCEEE-EETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEE-EeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 45678999999984 4454 5678999999754321 111111 1 11456789999985 233444433
Q ss_pred C--C----------CeEEEEECCCCc--------ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecC
Q 016032 85 S--D----------GTVSCTDLETGL--------ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNF 137 (396)
Q Consensus 85 ~--d----------g~v~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 137 (396)
. + ..|.-|.+..+. ....+..... ...+. ...|+|.|||.+.++.+..
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~---~~~H~--g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL---HRKHL--GGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES---SSSSC--EEEEEECTTSCEEEEECCT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC---CCccc--CCcEeECCCCcEEEEeCCC
Confidence 2 1 145556664321 1111221111 11222 6789999999877765543
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.84 E-value=17 Score=35.52 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=33.8
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecC
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVN 106 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 106 (396)
.+.+++..++ ..++++-+.|+++|+|++.+++++......
T Consensus 237 ~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 4677777777 789999999999999999999988876653
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.84 E-value=11 Score=36.80 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=31.0
Q ss_pred CceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccC
Q 016032 207 RVVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDS 242 (396)
Q Consensus 207 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 242 (396)
..+.+++..++..++++-+.|+++|+|++.+++++.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 356778888888999999999999999999998754
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=86.34 E-value=15 Score=31.32 Aligned_cols=174 Identities=11% Similarity=0.179 Sum_probs=97.5
Q ss_pred cCCeEEEEecCCCCcEEE-EEeC-------------CCcEEEeecccc--eeeeEecCC-----cccceeEEEEe---cC
Q 016032 20 SRRVTCLEFHPTNNHILL-SGDK-------------KGQVGVWDFYKV--SEKIVYGNI-----HSCIVNNIRFN---PT 75 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~-s~~~-------------dg~i~iwd~~~~--~~~~~~~~~-----~~~~v~~~~~~---~~ 75 (396)
--.|..+...+.+.-+++ +|-. --.|.+||+.+. +.+..+.-. ....+..+++. |.
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 346788888877732222 2211 125889999998 766655321 23567888887 21
Q ss_pred ---CCcEEEEE-eCCCeEEEEECCCCcccceeecCCCCCC-------CC--CcceeeeEEEeCCC----CCEEEEEecCC
Q 016032 76 ---NDGTVYAA-SSDGTVSCTDLETGLALSLMNVNPNGWH-------GP--RTWRMLYGMDINPE----KGVVLVADNFG 138 (396)
Q Consensus 76 ---~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------~~--~~~~~v~~~~~~~~----~~~l~~~~~~g 138 (396)
...+++.+ +..+-|.++|+.+++.-+.......... +. .-...+..++++|+ ++.|......+
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 12344333 3467899999999876554421111000 00 00124788999997 67777766554
Q ss_pred -eEEEEe---CCCCCCCccceeeecCC--ccEEEEEeccCCCCEEEEeeCCCcEEEEecCC
Q 016032 139 -FLYLVD---ARTNSRSGEAILIHRKG--SKVVGLHCNPIQPELLLSCGNDHFARIWDIRR 193 (396)
Q Consensus 139 -~i~i~d---~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 193 (396)
.++-.. ++..............+ ..-..++..+.++.++++--....|..|+...
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 344333 22222111221122222 24455677543788888888889999999864
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=83.54 E-value=17 Score=29.75 Aligned_cols=175 Identities=10% Similarity=0.038 Sum_probs=90.7
Q ss_pred EEecCCCCcEEEEEeCC-------------CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEe----CCCe
Q 016032 26 LEFHPTNNHILLSGDKK-------------GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAAS----SDGT 88 (396)
Q Consensus 26 ~~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----~dg~ 88 (396)
--++++++.+..+...+ ..|+..++...+..... . .. +..|+++ ++.|+-.. ....
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~-~---~~--~~~~s~~-g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD-P---DP--CIYASLI-GNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE-C---SC--EEEEEEE-TTEEEEEEESSSSCEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee-c---CC--ccEEEEe-CCEEEEEeecCCCCce
Confidence 34578886555554443 35777777766533332 1 11 2356777 66776654 3445
Q ss_pred EEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec-CCeEEEEeCCCCCCCccceeeecCCccEEEE
Q 016032 89 VSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN-FGFLYLVDARTNSRSGEAILIHRKGSKVVGL 167 (396)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~ 167 (396)
|...++..... ..+.... + .+++++++.|+..+. ...|+..++...... ..... ... .
T Consensus 131 Iy~~~~dGs~~-~~lt~~~-----------~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~----~l~~~--~~~-~ 189 (302)
T 3s25_A 131 LYRIRIDGEEK-KKIKNHY-----------L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA----LFYDC--NCY-K 189 (302)
T ss_dssp EEEEETTSCCC-EEEESSC-----------C--CCSEEETTEEEEECTTTCCEEEEETTTTEEE----EEECS--CEE-E
T ss_pred EEEEECCCCCe-EEEeCCC-----------c--eEeeEECCEEEEEeCCCceEEEEECCCCCEE----EEeCC--Ccc-c
Confidence 55566654332 2222110 1 235677888876665 568888887664321 11222 122 2
Q ss_pred EeccCCCCEEEEeeCC--CcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeC--CCcEEEEEcc
Q 016032 168 HCNPIQPELLLSCGND--HFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQ--DNRLRIWDSI 236 (396)
Q Consensus 168 ~~~~~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~ 236 (396)
.+.| ++.+|+-.... ..|..-++..... ..+. ...+ ..|+|++..|+.++. .+.|..-++.
T Consensus 190 ~~~P-~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt----~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 190 PVVL-DDTNVYYMDVNRDNAIVHVNINNPNP-VVLT----EANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEE-ETTEEEEEEGGGTTEEEEECSSSCCC-EECS----CSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred eeee-cCCEEEEEEcCCCcEEEEEECCCCCe-EEEe----CCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 3558 66666655433 3565555543221 2221 1223 347888888876532 3445555554
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.64 E-value=19 Score=29.52 Aligned_cols=173 Identities=7% Similarity=0.017 Sum_probs=88.9
Q ss_pred CCCCcEEEEEeC-CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeC--------------CCeEEEEEC
Q 016032 30 PTNNHILLSGDK-KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASS--------------DGTVSCTDL 94 (396)
Q Consensus 30 ~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--------------dg~v~iwd~ 94 (396)
+++..+.++... ++.|...+........... .. +-.++++ +.+|+-+.. ...|+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~----~~--~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN----DT--AMYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEE----EE--EEEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccC----Cc--eeeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 445444444332 4556666655443332221 22 2345777 666665543 246777777
Q ss_pred CCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEe----cCCeEEEEeCCCCCCCccceeeecCCccEEEEEec
Q 016032 95 ETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVAD----NFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCN 170 (396)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~ 170 (396)
..++...... -.+..++++++.|+... ....|+..++..... + ....+. + .+++
T Consensus 96 dg~~~~~l~~--------------~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~--~--~lt~~~--~--~~~~ 153 (302)
T 3s25_A 96 NGHGSTVLDP--------------DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK--K--KIKNHY--L--FTCN 153 (302)
T ss_dssp TSCCCEEEEC--------------SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC--E--EEESSC--C--CCSE
T ss_pred CCCcceEeec--------------CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe--E--EEeCCC--c--eEee
Confidence 7665332211 12335777888888776 234566666654221 1 222222 2 3456
Q ss_pred cCCCCEEEEeeC-CCcEEEEecCCCCCCCccccCCCCCceeEEEEcCCCCEEEEEeCCC--cEEEEEcccc
Q 016032 171 PIQPELLLSCGN-DHFARIWDIRRLEAGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDN--RLRIWDSIFG 238 (396)
Q Consensus 171 ~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~ 238 (396)
+ ++..|+-.+. ...|...++...... .+. . +... ..++|++.+|+-....+ .|..-++...
T Consensus 154 ~-~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~--~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 154 T-SDRYFYYNNPKNGQLYRYDTASQSEA-LFY--D--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp E-ETTEEEEECTTTCCEEEEETTTTEEE-EEE--C--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred E-ECCEEEEEeCCCceEEEEECCCCCEE-EEe--C--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 6 5565654443 677888887543322 221 1 2222 34668888887765443 4555555543
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=76.12 E-value=52 Score=30.85 Aligned_cols=36 Identities=11% Similarity=-0.070 Sum_probs=23.3
Q ss_pred ceeEEE-EecCCCcEEEEEeCC----CeEEEEECCCCcccc
Q 016032 66 IVNNIR-FNPTNDGTVYAASSD----GTVSCTDLETGLALS 101 (396)
Q Consensus 66 ~v~~~~-~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~ 101 (396)
....+. ++|++...+++-|.. ..++++|+.+++.+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 344555 788844444444433 369999999988764
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=75.84 E-value=36 Score=28.91 Aligned_cols=156 Identities=13% Similarity=0.114 Sum_probs=68.9
Q ss_pred ceeEEEEecCC-CcEEEEEeCCCeEEEEECCCCcccceeec---CCCC--C-----CCCCcceeeeEEEeCCC-CCEEEE
Q 016032 66 IVNNIRFNPTN-DGTVYAASSDGTVSCTDLETGLALSLMNV---NPNG--W-----HGPRTWRMLYGMDINPE-KGVVLV 133 (396)
Q Consensus 66 ~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~--~-----~~~~~~~~v~~~~~~~~-~~~l~~ 133 (396)
.|.++++.|.+ ...++.+...+-|...+ ..++.-..+.. .+.. + .+......+.++.+.|. ...+++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 57889998742 45566655555544432 22322222111 0000 0 00001123788889874 445555
Q ss_pred EecCCeEEEEeCCCCCCCcccee-eec---------CCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-
Q 016032 134 ADNFGFLYLVDARTNSRSGEAIL-IHR---------KGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD- 202 (396)
Q Consensus 134 ~~~~g~i~i~d~~~~~~~~~~~~-~~~---------~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~- 202 (396)
+...+.|...+-. +........ ... ....+.++.+.|.++..++++...+ |...+-. ++.-..+..
T Consensus 195 g~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~-G~tW~~~~~~ 271 (394)
T 3b7f_A 195 GMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR-EGVWKRIGDA 271 (394)
T ss_dssp EEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT-TTEEECGGGG
T ss_pred EECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC-CCcceECCCC
Confidence 6555545443221 111111000 000 0124889999985556777776554 4443321 111111111
Q ss_pred CCC--CCceeEEEEcC-CCCEEEEEe
Q 016032 203 LPH--KRVVNSAYFSP-SGSKILTTS 225 (396)
Q Consensus 203 ~~~--~~~i~~~~~~~-~~~~l~~~~ 225 (396)
+.. ...+..++++| +...|.++.
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCCCccceEEEEECCCCCCEEEEEe
Confidence 111 13356788887 344454443
No 357
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=74.75 E-value=60 Score=30.90 Aligned_cols=161 Identities=12% Similarity=0.122 Sum_probs=76.7
Q ss_pred cCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCC-----cccceeEEEEecCCCcEEEEEeCCCe----EE
Q 016032 20 SRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNI-----HSCIVNNIRFNPTNDGTVYAASSDGT----VS 90 (396)
Q Consensus 20 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~dg~----v~ 90 (396)
.+.|.+|+++|..+..+..+...+.|...+=....-....... ....|.+|++.|.+...++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 4689999999986566777777676655442211111111101 23469999999853455555543211 23
Q ss_pred EEE-CCCCcccceeecCCCCCCC-CCcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCCccceee-e---cCCcc
Q 016032 91 CTD-LETGLALSLMNVNPNGWHG-PRTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRSGEAILI-H---RKGSK 163 (396)
Q Consensus 91 iwd-~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~-~---~~~~~ 163 (396)
||. .+.|+.-..+...... .. ......+..+++.|. ...++++...+.|. -...+....+.... . .....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~-~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~--~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPM-GANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW--KSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEECSSCC-CTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE--EESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceeccCCccc-CccCCCccceeEEEEcCCCCCEEEEEeccCCEE--EECCCCcccCCCccCccccCCCCC
Confidence 333 3334332222221100 00 000001456777775 34555565344332 22221111111110 0 11135
Q ss_pred EEEEEeccCCCCEEEEeeCC
Q 016032 164 VVGLHCNPIQPELLLSCGND 183 (396)
Q Consensus 164 i~~~~~~~~~~~~l~~~~~d 183 (396)
+..+.++|.++..++++..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 78899988666666666654
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.48 E-value=19 Score=33.52 Aligned_cols=38 Identities=8% Similarity=0.083 Sum_probs=30.8
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecC
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVN 106 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 106 (396)
.|.++.+ + ..++++-+.|.++|+|++.+++++......
T Consensus 223 ~Is~~~~--~-~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 223 VISCKLF--H-ERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEEE--T-TTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred eEEEecc--C-CcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 4555544 3 679999999999999999999988887773
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.15 E-value=11 Score=35.06 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=46.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEEcccccccCCCcceeecccccccCCceeEEeCCC--CCCCceeeEeeeeeeecc
Q 016032 208 VVNSAYFSPSGSKILTTSQDNRLRIWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPK--DPSESLAVIGRYISENYN 285 (396)
Q Consensus 208 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~ 285 (396)
.|.++.+ +..++++-+.|.++|+|++.+++++..... ...... .. .|-.. .+...+.+.+.+++. +.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL---~~~~~~-~~----s~L~~~~~~~~~Lrl~~~~lv~-y~ 291 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM---VSQSDS-DP----SHFRKVEAVGEYLSLYNNTLVT-LL 291 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET---TTTSCC-CS----SCCCCCCSCCCCEEESSSEEEE-EE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc---ccCccc-cc----cccCcccCcchhHhheeeEEEE-Ee
Confidence 4555555 477999999999999999999986542211 000000 00 01111 223344444544443 44
Q ss_pred cccccceEEEEcCc
Q 016032 286 GAALHPIDFIDITT 299 (396)
Q Consensus 286 g~~d~~i~vwd~~~ 299 (396)
-...|..++|.+..
T Consensus 292 P~~~G~Fk~~~l~~ 305 (729)
T 3f7f_A 292 PLENGLFQMGTLLV 305 (729)
T ss_dssp TTTTCEEEEEEEEC
T ss_pred cCCCCeEEEEEEEE
Confidence 45668899998853
No 360
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=73.93 E-value=33 Score=27.62 Aligned_cols=182 Identities=14% Similarity=0.023 Sum_probs=91.6
Q ss_pred CeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccc
Q 016032 22 RVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALS 101 (396)
Q Consensus 22 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (396)
.|..++..... .++. . ||.|..|-.......-.. ..-...|..++.... ..+.-. +|.|..|-......+.
T Consensus 64 ~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P-~~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg 134 (282)
T 3qhy_B 64 GVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTTVP-AEARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTT 134 (282)
T ss_dssp CCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTCCC-GGGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTS
T ss_pred CEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCCCC-cccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCC
Confidence 45555554332 2333 3 677777765432211111 111245777776643 333334 8999999765432221
Q ss_pred eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCccceeeecCCccEEEEEeccCCCCEEEEee
Q 016032 102 LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCG 181 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 181 (396)
.... ....|..++..... .++-. +|.|+.|-............. ...|..++... ...++.
T Consensus 135 ~~~~---------~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~---~~~v~~i~~G~--~hs~al-- 195 (282)
T 3qhy_B 135 VPAE---------AQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEA---QSGVDDVAGGI--FHSLAL-- 195 (282)
T ss_dssp CCGG---------GGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGG---GSSEEEEEECS--SEEEEE--
T ss_pred CCcc---------CCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceec---CCCeEEEEecC--CEEEEE--
Confidence 1100 01125555544332 22233 799999977654433322111 23588887764 233333
Q ss_pred CCCcEEEEecCCCC-CCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 182 NDHFARIWDIRRLE-AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 182 ~d~~i~~wd~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.+|.|+.|-..... ...... ....|..++..... .++. . ||.|..|=...
T Consensus 196 ~~G~v~~wG~n~~gqlg~p~~---~~~~v~~i~~G~~h-~~al-~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTTVPTE---ALSGVSAIASGEWY-SLAL-K-NGKVIAWGSSR 246 (282)
T ss_dssp ETTEEEEEECCTTSTTCCCGG---GGSSCCEEEECSSC-EEEE-E-TTEEEEESTTC
T ss_pred ECCeEEEEECCCCCCCCCCcc---cCCCceEEEcCCCE-EEEE-E-CCEEEEecCCC
Confidence 59999999765421 211111 12346677664433 3333 3 89999996553
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=73.62 E-value=34 Score=27.53 Aligned_cols=211 Identities=11% Similarity=0.024 Sum_probs=115.8
Q ss_pred eeeecccc---CCeEEEEecCCCCcEEEEEeCCCcEEE---eecccceeeeEecCCcccceeEEEEecC-CCcEEEEEeC
Q 016032 13 CAVIRYHS---RRVTCLEFHPTNNHILLSGDKKGQVGV---WDFYKVSEKIVYGNIHSCIVNNIRFNPT-NDGTVYAASS 85 (396)
Q Consensus 13 ~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~dg~i~i---wd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~ 85 (396)
++..++|. +.+..+.-....+. |+.-+..|.++- |++....... +. .....|..+.. ++ ....++..+.
T Consensus 13 ir~~~g~~~~gD~~~~~~~~~t~~~-ll~fT~~G~v~~~~~~~lp~~~~~~-ll-~~~e~i~~v~~-~~~~~~~~v~~T~ 88 (276)
T 3no0_A 13 IIPVEELPLEKAPVVNILRVPFTEG-LFLVSNRGRVYWIAGSQALQGSKVS-LK-SREEKIVGAFI-REKFGNRLLLATK 88 (276)
T ss_dssp EEEGGGCCSSCCCEEEEEEEETTSC-EEEEETTSEEEEECSHHHHTSEECC-CS-STTCCEEEEEE-GGGSCSEEEEEET
T ss_pred eeeccCCCCCCCeEEEEEEECCCCE-EEEEcCCCeEEEEEhhhCccCcccc-cC-CCCCEEEEEEC-CcCCCCEEEEEeC
Confidence 44556663 35555555444433 444556777664 4443322211 22 24556666644 31 2678999999
Q ss_pred CCeEEEEECCCCc----ccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc------ce
Q 016032 86 DGTVSCTDLETGL----ALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE------AI 155 (396)
Q Consensus 86 dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~------~~ 155 (396)
+|.++...+..-. -...+.+... ..+..+........++..+..|.+..+....-..... .+
T Consensus 89 ~G~iKr~~l~~~~~~~~G~~~i~lkeg--------D~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i 160 (276)
T 3no0_A 89 KGYVKKIPLAEFEYKAQGMPIIKLTEG--------DEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGI 160 (276)
T ss_dssp TSEEEEEEGGGTTTCSTTEECSCCCTT--------CCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECC
T ss_pred CCEEEEEEHHHhhhhcCCeEEEecCCC--------CEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEE
Confidence 9999999876532 1111111111 1255555555667888999999988887644222111 11
Q ss_pred eeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCC----ccccCCCCCceeEEEEcCCCCEEEEEeCCCcEE
Q 016032 156 LIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGS----SLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLR 231 (396)
Q Consensus 156 ~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 231 (396)
.. ..+..+..+...+ ++..++..+..|.++...+....... -+..+...+.+..+........++..+.+|.+.
T Consensus 161 ~L-~~~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~i 238 (276)
T 3no0_A 161 KL-EKNDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAF 238 (276)
T ss_dssp CC-CTTCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEE
T ss_pred cc-CCCCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEE
Confidence 11 2234566666555 56688888899999988875432211 111112334444443333344566677788877
Q ss_pred E--EEccc
Q 016032 232 I--WDSIF 237 (396)
Q Consensus 232 i--wd~~~ 237 (396)
. ++...
T Consensus 239 r~~~~~~~ 246 (276)
T 3no0_A 239 YDKINQKD 246 (276)
T ss_dssp EEEEEGGG
T ss_pred EeeeCHHH
Confidence 7 77653
No 362
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=72.96 E-value=42 Score=28.38 Aligned_cols=155 Identities=7% Similarity=0.043 Sum_probs=88.8
Q ss_pred ecCCCcEEEEEeCCCeEEEEECCCC-------cccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeC
Q 016032 73 NPTNDGTVYAASSDGTVSCTDLETG-------LALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDA 145 (396)
Q Consensus 73 ~~~~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~ 145 (396)
-|+ ..++++.+.+|.|+--.+... .-...+..... ..+..+........++..+..|.++-+..
T Consensus 4 I~~-e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~--------D~l~~~~~~~t~d~ll~fT~~G~~~~~~~ 74 (370)
T 3l6v_A 4 IAP-EDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEE--------DFIDQLWLVNTHDTLLTFTSSGKVFWLPV 74 (370)
T ss_dssp CCC-CCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCC--------CCEEEEEEECTTCEEEEEETTSEEEEEEG
T ss_pred ccC-CCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCC--------CEEEEEEEecCCCEEEEEeCCCeEEEEEH
Confidence 456 778999999999997655321 11222222222 12555555556677888888887776654
Q ss_pred ---CCCCC------CccceeeecCCccEEEEEecc--CCCCEEEEeeCCCcEEEEecCCCCCC----CccccCCCCCcee
Q 016032 146 ---RTNSR------SGEAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAG----SSLCDLPHKRVVN 210 (396)
Q Consensus 146 ---~~~~~------~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~~~~~~~i~ 210 (396)
..... ....+.. ..+..|.++.... ....+|+.++..|.++.-.+...... ...-.+.....+.
T Consensus 75 ~eip~~~r~a~G~~i~~ll~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv 153 (370)
T 3l6v_A 75 HQLPEAGSNARGRPIINWIPL-ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALV 153 (370)
T ss_dssp GGSCBCCTTSCCEEGGGSCCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEE
T ss_pred HHCcCCCcccCCcCHhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEE
Confidence 32211 1111111 2334566654432 13468999999999999886543321 1111122344555
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 211 SAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 211 ~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.+........|+..+..|.+..++...
T Consensus 154 ~v~~~~~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 154 GVALTDGDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp EEEEECSCCEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCceEEEEeCCCeEEEEEccc
Confidence 555555556788888899988888754
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.94 E-value=20 Score=35.89 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=32.6
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecC
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVN 106 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 106 (396)
.+.+++..++ ..++++-+.|+++|+|++.+++++......
T Consensus 239 ~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 4455566666 789999999999999999999998876654
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.21 E-value=72 Score=29.90 Aligned_cols=202 Identities=11% Similarity=0.003 Sum_probs=102.1
Q ss_pred eEEEE-ecCCCCcEEEEEeCCC----cEEEeecccceeeeEecC-Cc-c-----cceeEEEEecCCCcEEEEEe------
Q 016032 23 VTCLE-FHPTNNHILLSGDKKG----QVGVWDFYKVSEKIVYGN-IH-S-----CIVNNIRFNPTNDGTVYAAS------ 84 (396)
Q Consensus 23 v~~~~-~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~-~~-~-----~~v~~~~~~~~~~~~l~s~~------ 84 (396)
...+. ++|++.+++++-|..| .++++|+.+++.+.--.. .- . .....++|..+ ..++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCc
Confidence 34455 8999977676655554 599999998876532211 00 0 01244588744 44544321
Q ss_pred ----CCCeEEEEECCCCcccc--eeecCCCCCCCCCcceeeeEEEeCCCCC-----EEEEEe---cCCeEEEEeCCCCCC
Q 016032 85 ----SDGTVSCTDLETGLALS--LMNVNPNGWHGPRTWRMLYGMDINPEKG-----VVLVAD---NFGFLYLVDARTNSR 150 (396)
Q Consensus 85 ----~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~---~~g~i~i~d~~~~~~ 150 (396)
....|+.|.+-+..... .+...... .......++++. .+++.+ ....+++.+......
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 281 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEY--------IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL 281 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTS--------CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCc--------eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC
Confidence 12468888876654332 23222211 123344556655 233332 224566766553211
Q ss_pred CccceeeecCCccEEEEEeccCCCCEEEEe----------eCCCcEEEEecCCCCCC-------CccccCCCCCceeEEE
Q 016032 151 SGEAILIHRKGSKVVGLHCNPIQPELLLSC----------GNDHFARIWDIRRLEAG-------SSLCDLPHKRVVNSAY 213 (396)
Q Consensus 151 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~----------~~d~~i~~wd~~~~~~~-------~~~~~~~~~~~i~~~~ 213 (396)
....+..... . .+..+. ++.+++.. ...+.|...++.+.... +.+........+..+.
T Consensus 282 ~~~~l~~~~~---~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (711)
T 4hvt_A 282 KLQKINMPSD---A-TLQGSF-KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIS 356 (711)
T ss_dssp EEEECCSCTT---C-EEEEEE-TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEE
T ss_pred cceEeecCCc---c-eEeeeE-CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEE
Confidence 1011111111 1 122333 44544432 13577899998764211 1112223445678888
Q ss_pred EcCCCCEEEEEeCCCc--EEEEEccccc
Q 016032 214 FSPSGSKILTTSQDNR--LRIWDSIFGN 239 (396)
Q Consensus 214 ~~~~~~~l~~~~~d~~--i~iwd~~~~~ 239 (396)
|..+ .++++...++. |.++++.++.
T Consensus 357 ~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 357 TTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp ECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred EECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 8865 56677766764 6677766553
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=68.21 E-value=50 Score=27.33 Aligned_cols=162 Identities=12% Similarity=0.091 Sum_probs=91.4
Q ss_pred cCCeEEEEecC---CCCcEEEEEeCCCcEEEeecccceee-----eEecCCcccceeEEEEecCCCcEEEEEeCCCeEEE
Q 016032 20 SRRVTCLEFHP---TNNHILLSGDKKGQVGVWDFYKVSEK-----IVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSC 91 (396)
Q Consensus 20 ~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~i 91 (396)
...|.++..-+ +. .+++..+.+|.|+--.+..-... ..+.......+..+..... ...|+..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e-~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~-~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDA-PYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSA-GDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSS-SEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECT-TCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCC-CEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecC-CCEEEEEECCCeEEE
Confidence 34555554333 34 57899999999998887652211 1111112345555555544 567777888898888
Q ss_pred EECC--CCcc-------cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc------cee
Q 016032 92 TDLE--TGLA-------LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE------AIL 156 (396)
Q Consensus 92 wd~~--~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~------~~~ 156 (396)
+... .-.. +..+.+... ..|.++...+.+..++..+..|.++.-.+........ .+.
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~--------d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~ 243 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNID--------DRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 243 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTT--------CCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSC
T ss_pred EECcccccCcCCcCCCCeeeecCCCC--------CEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEE
Confidence 8766 2111 111222111 2266666666677899999999999887654322211 111
Q ss_pred eecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecC
Q 016032 157 IHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIR 192 (396)
Q Consensus 157 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~ 192 (396)
.....+.+..+.... ....++..+.+|.+.-++..
T Consensus 244 l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 244 YDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEEGG
T ss_pred ecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEehh
Confidence 222133455554444 44566666777887777764
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.95 E-value=61 Score=27.46 Aligned_cols=188 Identities=13% Similarity=0.047 Sum_probs=86.1
Q ss_pred EEEEEeCCCcEEEeeccc-ceeeeEe-cCCcccceeEEEEecCCCcEEEEEeCCC----eEEEEECCCCcccceeecCCC
Q 016032 35 ILLSGDKKGQVGVWDFYK-VSEKIVY-GNIHSCIVNNIRFNPTNDGTVYAASSDG----TVSCTDLETGLALSLMNVNPN 108 (396)
Q Consensus 35 ~l~s~~~dg~i~iwd~~~-~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~ 108 (396)
.|..|...| +.+++... +..-... .......|.+|++.|.+...|+.+...| .|... ...++.-..+....
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~- 100 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP- 100 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC-
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc-
Confidence 566777776 55554432 1111111 0113457999999983244555555444 34332 23333222222110
Q ss_pred CCCCCC------cceeeeEEEeCCC--CCEEEEEecCCeEEEEeCCCCCCCccceee-----------------ecCCcc
Q 016032 109 GWHGPR------TWRMLYGMDINPE--KGVVLVADNFGFLYLVDARTNSRSGEAILI-----------------HRKGSK 163 (396)
Q Consensus 109 ~~~~~~------~~~~v~~~~~~~~--~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~-----------------~~~~~~ 163 (396)
.+.... ....|.++++.|. ...+.++...+.|...+-.... .+.... ......
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~t--W~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGAS--WEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSB--CEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCC--eEECcCccCCccccccccccccCCCCCCc
Confidence 000000 1124778888872 4556666666666554322111 111100 011235
Q ss_pred EEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCcccc-C-----C-----CCCceeEEEEcCC-CCEEEEEeCCC
Q 016032 164 VVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCD-L-----P-----HKRVVNSAYFSPS-GSKILTTSQDN 228 (396)
Q Consensus 164 i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~-----~-----~~~~i~~~~~~~~-~~~l~~~~~d~ 228 (396)
+.+|.+.|.+...++.+..++.|...+-. ++.-..+.. . . ....+.++.++|. ...|+++...+
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 78899988445555555544444433211 111111100 0 0 0134889999985 45676666544
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=65.91 E-value=93 Score=29.58 Aligned_cols=160 Identities=11% Similarity=0.067 Sum_probs=75.2
Q ss_pred cccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecCCe--
Q 016032 63 HSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNFGF-- 139 (396)
Q Consensus 63 ~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~g~-- 139 (396)
-...|.+|+++|.+...++++...+.|...+ +.|+.-..+...... ..-....+.++++.|. ...++++.....
T Consensus 13 ~~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~--~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 13 GGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEA--QDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCG--GGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCc--ccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 3468999999997667778887777665443 233322221111000 0001123888999884 344444432211
Q ss_pred --EEEEeCCCCCCCccceeee-------cCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCC-CCCCCccccC----CC
Q 016032 140 --LYLVDARTNSRSGEAILIH-------RKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRR-LEAGSSLCDL----PH 205 (396)
Q Consensus 140 --i~i~d~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~----~~ 205 (396)
-.||--..+....+..... .....+..++++|.+++.++.+...+.| |-... ++.-..+... ..
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~ 167 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTN 167 (789)
T ss_dssp SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCST
T ss_pred cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCC
Confidence 2233222211111111110 0001245678887556677777644443 32221 1111111110 11
Q ss_pred CCceeEEEEcC-CCCEEEEEeCC
Q 016032 206 KRVVNSAYFSP-SGSKILTTSQD 227 (396)
Q Consensus 206 ~~~i~~~~~~~-~~~~l~~~~~d 227 (396)
...+..+.++| ++..++++..+
T Consensus 168 ~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 168 GIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCeEEEEECCCCCCEEEEEEcC
Confidence 24578899988 44566666554
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=59.98 E-value=71 Score=26.20 Aligned_cols=197 Identities=11% Similarity=0.068 Sum_probs=108.5
Q ss_pred CCCCcEEEEEeCCCcEEEeecccceeee-------EecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCC---C--
Q 016032 30 PTNNHILLSGDKKGQVGVWDFYKVSEKI-------VYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLET---G-- 97 (396)
Q Consensus 30 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~-- 97 (396)
|+. .++++.+.+|.|+--.+..-.... .+.......+..+..... .+.++..+..|.++-..... .
T Consensus 6 ~~e-~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~-~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKE-NIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNT-HDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --C-EEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEET-TCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCC-CEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECC-CCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 444 578888999999987665432111 111112334444444444 56777778888877665431 1
Q ss_pred ----ccc-ceeecCCCCCCCCCcceeeeEEEeCC---CCCEEEEEecCCeEEEEeCCCCCCC---c-cceeeecCCccEE
Q 016032 98 ----LAL-SLMNVNPNGWHGPRTWRMLYGMDINP---EKGVVLVADNFGFLYLVDARTNSRS---G-EAILIHRKGSKVV 165 (396)
Q Consensus 98 ----~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~g~i~i~d~~~~~~~---~-~~~~~~~~~~~i~ 165 (396)
..+ ..+...+. ..+.++...+ +..+++..+..|.++...+...... . ..+... .+..+.
T Consensus 84 ~~~G~~i~~~l~l~~~--------e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~-~~d~lv 154 (312)
T 1suu_A 84 ASKGQNISELINLGDQ--------EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN-DKDFVT 154 (312)
T ss_dssp ----CBGGGTSCCCTT--------CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-TTCCEE
T ss_pred cCCCcChhhccCCCCC--------CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-CCCEEE
Confidence 110 01111111 1133333222 4678889999999999887543221 1 111122 234566
Q ss_pred EEEeccCCCCEEEEeeCCCcEEEEecCCCCC------CCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 166 GLHCNPIQPELLLSCGNDHFARIWDIRRLEA------GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 166 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
.+.... ....++..+.+|.+..+....-.. +...-.+.....|..+..-.++..|++.+..|..+...+..-
T Consensus 155 ~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 155 SAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 665554 456788888899998888753211 111111223455666655555667888888999988888643
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=59.18 E-value=82 Score=26.70 Aligned_cols=163 Identities=15% Similarity=0.169 Sum_probs=84.1
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccce-----eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeE
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSL-----MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFL 140 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i 140 (396)
.|..++-. ....+.-..||.|..|=....-.+.. ...+. .... .....+..++++....+.++-..+|.|
T Consensus 54 ~i~~i~~G---~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~-~v~~-~~~~~~~~v~i~~G~~h~~al~~~G~v 128 (389)
T 3kci_A 54 RPVQLIGG---EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPT-LLES-IQHVFIKKVAVNSGGKHCLALSSEGEV 128 (389)
T ss_dssp CEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEE-ECGG-GTTSCEEEEEECTTCSEEEEEETTSCE
T ss_pred ceEEEEeC---CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCE-Eccc-ccCCceeEEEECcCCCeEEEEcCCCCE
Confidence 34455443 44556667789999996543211100 00000 0000 000114446666777777888889999
Q ss_pred EEEeCCCCCCCc--------cceeee-cCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCC-CC----------Ccc
Q 016032 141 YLVDARTNSRSG--------EAILIH-RKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE-AG----------SSL 200 (396)
Q Consensus 141 ~i~d~~~~~~~~--------~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~----------~~~ 200 (396)
+.|-......+. .+.... .....|..++.. ..+.++...+|.|+.|-..... .. ..+
T Consensus 129 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v 205 (389)
T 3kci_A 129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG---GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLV 205 (389)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC---SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEEC
T ss_pred EEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC---cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEe
Confidence 999654322111 000111 112256667664 3566666789999999754311 00 011
Q ss_pred ccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 201 CDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 201 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
..+ ....|..++........+.-..+|.|..|-...
T Consensus 206 ~~~-~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 206 EAL-QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp GGG-TTSCEEEEEECCSSCEEEEEETTTEEEEEECCG
T ss_pred ccc-CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCC
Confidence 111 223466666543334566667899999997654
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.40 E-value=47 Score=30.26 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=35.9
Q ss_pred eEEEEecCCCCcEEEEEeCC------------CcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 23 VTCLEFHPTNNHILLSGDKK------------GQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 23 v~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.--|+|+|.| ++++.-..+ ..+.+.+..+++....+.......++.++|+|+ ++.|++.
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspD-g~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD-QKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT-SSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCC-CCEEEEE
Confidence 4568999999 454443221 124444555555444443345678999999999 6655553
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.96 E-value=13 Score=37.20 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=29.5
Q ss_pred CCcceeeeccCCcEEEeec-CCcEEEEcCCCcceeeecc
Q 016032 313 TISPVNKLHPRDDVLASGS-SRSIFIWRPKEKSELVEQK 350 (396)
Q Consensus 313 ~i~~~~~~~~~~~~l~sg~-d~~i~iw~~~~~~~~~~~~ 350 (396)
.+.++ +..++..+|++-+ |+++|||++.+++++.+..
T Consensus 239 ~~vs~-~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISM-IFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCC-EEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEe-eccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34444 5677888999988 9999999999999877754
No 372
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=54.55 E-value=82 Score=25.28 Aligned_cols=144 Identities=10% Similarity=-0.021 Sum_probs=79.2
Q ss_pred cceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEe
Q 016032 65 CIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVD 144 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d 144 (396)
..|..++.... ..++. . ||.|..|-....-.+..... ....|..++...... ++. . +|.|+.|-
T Consensus 24 ~~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~p~~---------~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG 87 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTMPAA---------TQSGVDAIAAGNYHS-LAL-K-DGEVIAWG 87 (282)
T ss_dssp SSCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSCCGG---------GGSCCCEEEECSSEE-EEE-E-TTEEEEEE
T ss_pred CCCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCCCcc---------CCCCEEEEEeCCCEE-EEE-E-CCEEEEee
Confidence 46777776543 33333 5 89999997655332221100 011266666544333 333 4 89999998
Q ss_pred CCCCCCCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCC-CCCccccCCCCCceeEEEEcCCCCEEEE
Q 016032 145 ARTNSRSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLE-AGSSLCDLPHKRVVNSAYFSPSGSKILT 223 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 223 (396)
......+..+... ...|..++... .+.+.-. +|.|+.|-..... ..... .....|..++..... .+.
T Consensus 88 ~n~~Gqlg~P~~~---~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~~~---~~~~~i~~i~~G~~~--~~~ 155 (282)
T 3qhy_B 88 GNEDGQTTVPAEA---RSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTVPA---EAQSGVTALDGGVYT--ALA 155 (282)
T ss_dssp CCTTSTTCCCGGG---SSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSCCG---GGGSSEEEEEECSSE--EEE
T ss_pred CCCCCCCCCCccc---CCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCCCc---cCCCCeEEEEcccCE--EEE
Confidence 7654443322111 23688888764 4444445 8999999865422 21111 123457777664332 222
Q ss_pred EeCCCcEEEEEccc
Q 016032 224 TSQDNRLRIWDSIF 237 (396)
Q Consensus 224 ~~~d~~i~iwd~~~ 237 (396)
-. ||.|..|-...
T Consensus 156 l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 156 VK-NGGVIAWGDNY 168 (282)
T ss_dssp EE-TTEEEEEECCT
T ss_pred EE-CCEEEEecCCC
Confidence 33 79999997664
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.58 E-value=64 Score=29.39 Aligned_cols=59 Identities=17% Similarity=0.296 Sum_probs=39.3
Q ss_pred eeEEEEecCCCcEEEEEeCC------------CeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEE
Q 016032 67 VNNIRFNPTNDGTVYAASSD------------GTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVA 134 (396)
Q Consensus 67 v~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 134 (396)
.-.|+|+|. +.+++.-..+ ..+.+.+..+++....+..+.. ..++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g--------aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG--------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT--------CEEEEEEECTTSSEEEEE
T ss_pred CcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC--------ccCcCeeECCCCCEEEEE
Confidence 466899998 7655554322 2455666667776665554432 349999999999887765
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=50.08 E-value=92 Score=28.21 Aligned_cols=61 Identities=16% Similarity=0.222 Sum_probs=37.5
Q ss_pred CCeEEEEecCCCCcEEE-EEeC-----------CCcEEEeecccceeeeEecCCcccceeEEEEecCCCcEEEEE
Q 016032 21 RRVTCLEFHPTNNHILL-SGDK-----------KGQVGVWDFYKVSEKIVYGNIHSCIVNNIRFNPTNDGTVYAA 83 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~-s~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 83 (396)
.....|.|.++|. +.+ +-.. ...+..++..+++....+.......++.++|+|+ +..|+++
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD-~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD-QKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT-SSEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC-CCEEEEE
Confidence 4567899999994 544 4221 1145556665565444442223467899999999 6665554
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.55 E-value=1.7e+02 Score=27.48 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=57.0
Q ss_pred CCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEec-CC----cccceeEEEEecCCCcEEEEEeCC-------Ce
Q 016032 21 RRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYG-NI----HSCIVNNIRFNPTNDGTVYAASSD-------GT 88 (396)
Q Consensus 21 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~~~l~s~~~d-------g~ 88 (396)
+.|..|+++|..+..+..+...+.|...+-....-..... .+ ....|.+|++.|.+.+.++.+... +.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 3799999999865556667666665555422221111111 11 124699999998545555554421 12
Q ss_pred EEEEECC-CCcccceeecCCCCCCC-CCcceeeeEEEeCCC-CCEEEEEec
Q 016032 89 VSCTDLE-TGLALSLMNVNPNGWHG-PRTWRMLYGMDINPE-KGVVLVADN 136 (396)
Q Consensus 89 v~iwd~~-~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~l~~~~~ 136 (396)
..||... .|+.-..+...... .. ......+..++++|. ...++++..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~-~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKM-GGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCC-CTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred ccEEEeCCCCCCcccCCCCccc-CCCcCcccccceEEECCCCCCEEEEeec
Confidence 3455443 34333332221100 00 000011457888885 355666653
No 376
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=47.66 E-value=1.8e+02 Score=27.28 Aligned_cols=115 Identities=14% Similarity=0.115 Sum_probs=57.5
Q ss_pred ceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCC-CCEEEEEecC-------
Q 016032 66 IVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPE-KGVVLVADNF------- 137 (396)
Q Consensus 66 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~------- 137 (396)
.|..|+++|.+...++++...+.|...+ ..++.-..+..... ........+.+++++|. .+.++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~--~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQ--MDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCC--GGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccC--cccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 8999999998567777777666665554 22322121111000 00001123889999984 3444444321
Q ss_pred CeEEEEeCCCCCCCccceeeecC-------CccEEEEEeccCCCCEEEEeeCC
Q 016032 138 GFLYLVDARTNSRSGEAILIHRK-------GSKVVGLHCNPIQPELLLSCGND 183 (396)
Q Consensus 138 g~i~i~d~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~l~~~~~d 183 (396)
+...||--..+....+....... ...+..|+++|.+++.++++...
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 12344443333222222111100 01246788998777777777643
No 377
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.56 E-value=1.2e+02 Score=24.27 Aligned_cols=161 Identities=13% Similarity=0.057 Sum_probs=90.5
Q ss_pred cCCeEEEEecC-CCCcEEEEEeCCCcEEEeecccce----eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC
Q 016032 20 SRRVTCLEFHP-TNNHILLSGDKKGQVGVWDFYKVS----EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL 94 (396)
Q Consensus 20 ~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (396)
...|..+-... +. .+++..+.+|.++-..+..-. ....+.-.....+..+..... .+.++..+..|.+..+..
T Consensus 67 ~e~i~~v~~~~~~~-~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~-~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFIREKFG-NRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVD-ETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEEGGGSC-SEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCS-SCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEECCcCCC-CEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCC-CCEEEEEECCCEEEEEEh
Confidence 45566654321 33 578889999999998876532 111111112345555555544 567888888998888765
Q ss_pred CCCcc-------cceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCcc----ceeeecCCcc
Q 016032 95 ETGLA-------LSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSGE----AILIHRKGSK 163 (396)
Q Consensus 95 ~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~~----~~~~~~~~~~ 163 (396)
..-.. +..+.+... ..+.++...+++..++..+..|.++...+........ .... ..+..
T Consensus 145 ~eip~~gR~a~Gv~~i~L~~~--------d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~ 215 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLEKN--------DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDT 215 (276)
T ss_dssp GGSCBCCTTCCCEECCCCCTT--------CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSC
T ss_pred hhCCCcCCCCCCEEEEccCCC--------CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCc
Confidence 42111 111222111 2255555555667899999999999888754322211 1111 23334
Q ss_pred EEEEEeccCCCCEEEEeeCCCcEEE--EecC
Q 016032 164 VVGLHCNPIQPELLLSCGNDHFARI--WDIR 192 (396)
Q Consensus 164 i~~~~~~~~~~~~l~~~~~d~~i~~--wd~~ 192 (396)
+..+.... ....++..+.+|.+.. ++..
T Consensus 216 lv~~~~~~-~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 216 LVDLIPIK-EEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEEES-SEEEEEEEETTSCEEEEEEEGG
T ss_pred EEEEEEeC-CCCEEEEEcCCCeEEEeeeCHH
Confidence 55544433 4456666777888877 7764
No 378
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=42.79 E-value=2.2e+02 Score=26.87 Aligned_cols=163 Identities=12% Similarity=0.087 Sum_probs=76.4
Q ss_pred ccCCeEEEEecCCCCcEEEEEeCCCcEEEeecccceeeeEecC-------C----cccceeEEEEecCCCcEEEEEeCC-
Q 016032 19 HSRRVTCLEFHPTNNHILLSGDKKGQVGVWDFYKVSEKIVYGN-------I----HSCIVNNIRFNPTNDGTVYAASSD- 86 (396)
Q Consensus 19 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~----~~~~v~~~~~~~~~~~~l~s~~~d- 86 (396)
-.+.|.+|+++|.++.++..+...|.|...+=. ++.=..+.. + ....+.+|++.|.+.+.++.+..+
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~Dg-G~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAA-KWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCC-CCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 456899999999887677777766655433311 111111111 0 224589999998544555554321
Q ss_pred ----CeEEEEE-CCCCcccceeecCCCCCCCC-CcceeeeEEEeCCC-CCEEEEEecCCeEEEEeCCCCCCCccceeee-
Q 016032 87 ----GTVSCTD-LETGLALSLMNVNPNGWHGP-RTWRMLYGMDINPE-KGVVLVADNFGFLYLVDARTNSRSGEAILIH- 158 (396)
Q Consensus 87 ----g~v~iwd-~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~g~i~i~d~~~~~~~~~~~~~~- 158 (396)
....||. .+.|+.-..+..+.. .... ........++++|. ...++++...+.|.. ....++.-.......
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~-~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVP-MGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPD 175 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSC-CCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcc-cCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCcc
Confidence 1133443 334443333322110 0000 00001235777775 345555554443332 111121111110001
Q ss_pred --cCCccEEEEEeccCCCCEEEEeeCCC
Q 016032 159 --RKGSKVVGLHCNPIQPELLLSCGNDH 184 (396)
Q Consensus 159 --~~~~~i~~~~~~~~~~~~l~~~~~d~ 184 (396)
.....+..|.++|.++..++.+..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 11124788899885556566666554
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=42.48 E-value=1.6e+02 Score=24.96 Aligned_cols=193 Identities=15% Similarity=0.133 Sum_probs=94.3
Q ss_pred EEEEeCCCcEEEeecccc-----------eeeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccce--
Q 016032 36 LLSGDKKGQVGVWDFYKV-----------SEKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSL-- 102 (396)
Q Consensus 36 l~s~~~dg~i~iwd~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-- 102 (396)
.+.-..||.|..|-.... ..+..+.......+..++.+.- ....+.-..||.|..|-....-.+..
T Consensus 65 ~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G-~~h~~al~~~G~v~~wG~n~~GqLG~g~ 143 (389)
T 3kci_A 65 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSG-GKHCLALSSEGEVYSWGEAEDGKLGHGN 143 (389)
T ss_dssp EEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTT-CSEEEEEETTSCEEEEECCGGGTTCSSS
T ss_pred EEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcC-CCeEEEEcCCCCEEEEeCCCCCcCCCCC
Confidence 444456888888864321 1111111112234555666554 56666677899999996543211100
Q ss_pred ---eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCCCCCCc--------cceee-ecCCccEEEEEec
Q 016032 103 ---MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDARTNSRSG--------EAILI-HRKGSKVVGLHCN 170 (396)
Q Consensus 103 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~~~~~~--------~~~~~-~~~~~~i~~~~~~ 170 (396)
...+ ....... ...|..++. .....++-..+|.|+.|-.....++. .+... ......+..++..
T Consensus 144 ~~~~~~p-~~v~~l~-~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 144 RSPCDRP-RVIESLR-GIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp CCCEEEE-EECGGGT-TSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CccCcCC-eEecccC-CCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 0000 0000000 011444433 34556666788999999654322111 00000 1122356777765
Q ss_pred cCCCCEEEEeeCCCcEEEEecCCCCC-C----------CccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 171 PIQPELLLSCGNDHFARIWDIRRLEA-G----------SSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 171 ~~~~~~l~~~~~d~~i~~wd~~~~~~-~----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
. ...+.++...+|.|+.|-...... . ..+..+ ....|..++.. ....+.-..+|.|..|=...
T Consensus 220 ~-g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 220 S-GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-TGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp C-SSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG-TTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred C-CCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc-CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 4 345666677899999997542111 0 001111 11235555553 33444456789999997654
No 380
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=42.25 E-value=1.4e+02 Score=27.00 Aligned_cols=62 Identities=15% Similarity=0.229 Sum_probs=39.7
Q ss_pred cceeEEEEecCCCcEEEEEeC------------CCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEE
Q 016032 65 CIVNNIRFNPTNDGTVYAASS------------DGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVL 132 (396)
Q Consensus 65 ~~v~~~~~~~~~~~~l~s~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 132 (396)
.....|.|.++ +.+.+.... ...|..++..+++....+..+.. ..++.++|+||++.|+
T Consensus 476 nsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~--------aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 476 NSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG--------CEVTGISFSPDQKTLF 546 (592)
T ss_dssp CCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT--------CEEEEEEECTTSSEEE
T ss_pred CCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC--------ccccCCEECCCCCEEE
Confidence 34667999998 666663221 12566666666776555432221 2389999999998887
Q ss_pred EEe
Q 016032 133 VAD 135 (396)
Q Consensus 133 ~~~ 135 (396)
++-
T Consensus 547 V~v 549 (592)
T 4a9v_A 547 VGI 549 (592)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 381
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=41.42 E-value=1.5e+02 Score=24.32 Aligned_cols=154 Identities=16% Similarity=0.126 Sum_probs=88.2
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCcccc-------eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC
Q 016032 74 PTNDGTVYAASSDGTVSCTDLETGLALS-------LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR 146 (396)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~ 146 (396)
++ ..++++.+.+|.|+--.+..-.... .+..... ..+..+........++..+..|.++-+...
T Consensus 6 ~~-e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~--------D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~ 76 (312)
T 1suu_A 6 QK-ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG--------DEIVIALCVNTHDYLFMISNEGKLYLINAY 76 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT--------CCEEEEEEEETTCEEEEEETTSEEEEEEGG
T ss_pred CC-CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC--------CEEEEEEEECCCCEEEEEECCCeEEEEEHH
Confidence 44 6788999999999988765432221 1111111 114444444556678888888988777654
Q ss_pred CCC---------CCccceeeecCCccEEEEEeccC--CCCEEEEeeCCCcEEEEecCCCCC----CCccccCCCCCceeE
Q 016032 147 TNS---------RSGEAILIHRKGSKVVGLHCNPI--QPELLLSCGNDHFARIWDIRRLEA----GSSLCDLPHKRVVNS 211 (396)
Q Consensus 147 ~~~---------~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~i~~ 211 (396)
.-. .....+... .+..|.++...+. ....++..+..|.++.-.+..... +.....+.....+..
T Consensus 77 ~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~ 155 (312)
T 1suu_A 77 EIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTS 155 (312)
T ss_dssp GSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEE
T ss_pred HCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEE
Confidence 211 111111222 2334555543321 356788888999999888754322 111112233455666
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 212 AYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 212 ~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
+........++..+.+|.+..+....
T Consensus 156 ~~~~~~~~~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 156 AEIVFKDEKVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEeCCCCEEEEEeCCCcEEEEEHHH
Confidence 65555566788888999999998865
No 382
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=39.20 E-value=1.6e+02 Score=24.05 Aligned_cols=152 Identities=9% Similarity=0.093 Sum_probs=82.4
Q ss_pred CcEEEEEeCCCeEEEEECCCCcccce-------eecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC---
Q 016032 77 DGTVYAASSDGTVSCTDLETGLALSL-------MNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR--- 146 (396)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~--- 146 (396)
...+++.+.+|.|+--.+...+.... +..... ..+..+........++..+..|.++-+...
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~--------D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp 74 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE--------DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLP 74 (307)
T ss_dssp CEEEEEEETTSEEEEEECC----------------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC--------CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCc
Confidence 56788899999998777654322111 111111 114444444556678888888887666543
Q ss_pred CCCC--Cc----cceeeecCCccEEEEEecc--CCCCEEEEeeCCCcEEEEecCCCCCCC----ccccCCCCCceeEEEE
Q 016032 147 TNSR--SG----EAILIHRKGSKVVGLHCNP--IQPELLLSCGNDHFARIWDIRRLEAGS----SLCDLPHKRVVNSAYF 214 (396)
Q Consensus 147 ~~~~--~~----~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~i~~~~~ 214 (396)
.... .. ..+.. ..+..|.++...+ .+..+++..+..|.++--.+....... ..-.+...+.+..+..
T Consensus 75 ~~~~~a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~ 153 (307)
T 1zi0_A 75 EATRGARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDL 153 (307)
T ss_dssp CCCSSSCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEE
T ss_pred CCCCCCCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEE
Confidence 2211 11 11121 2333566654421 145678888999999998775322211 1111122355555555
Q ss_pred cCCCCEEEEEeCCCcEEEEEccc
Q 016032 215 SPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 215 ~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
......++..+.+|.+..+....
T Consensus 154 ~~~~~~i~l~T~~G~~irf~~~~ 176 (307)
T 1zi0_A 154 TSGEDEVMLFSAEGKVVRFKESS 176 (307)
T ss_dssp ECTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCCEEEEECCCCcEEEEEHHH
Confidence 55556777888899988888764
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=38.57 E-value=1.1e+02 Score=27.23 Aligned_cols=69 Identities=4% Similarity=-0.014 Sum_probs=42.4
Q ss_pred EEEEEeccC-----CCCEEEEeeCCCcEEEEecC-CCC-------CCCccccCCCCCceeEEEEcCCCCEEEEEeCCCcE
Q 016032 164 VVGLHCNPI-----QPELLLSCGNDHFARIWDIR-RLE-------AGSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRL 230 (396)
Q Consensus 164 i~~~~~~~~-----~~~~l~~~~~d~~i~~wd~~-~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 230 (396)
.++|+.... +-..++.|+.+|.|.-.-+. ... ....+..+....+|..|.++++..+|++++..+.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 566665531 22467788899987544332 111 11112222345789999999999999999987765
Q ss_pred EE
Q 016032 231 RI 232 (396)
Q Consensus 231 ~i 232 (396)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 384
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=38.01 E-value=1.5e+02 Score=23.43 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=80.5
Q ss_pred cEEEEEeCCCeEEEEECCCCcccceeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCCC---CCCCc--
Q 016032 78 GTVYAASSDGTVSCTDLETGLALSLMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDART---NSRSG-- 152 (396)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~~---~~~~~-- 152 (396)
..+++.+.+|.|+--...... ...+..... ..+..+........++..+..|.++-+.... .....
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~-~~~~~lke~--------D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~ 73 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDID-APGLNYKAG--------DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEP 73 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCC-STTSCCCTT--------CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEE
T ss_pred CEEEEEeCCCEEEEeeCCcCC-ceeccCCCC--------CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeE
Confidence 456677888888766543321 111111111 1133443333445577777888877665432 11111
Q ss_pred --cceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCC----CCccccCCCCCceeEEEEc-CCCCEEEEEe
Q 016032 153 --EAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEA----GSSLCDLPHKRVVNSAYFS-PSGSKILTTS 225 (396)
Q Consensus 153 --~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~ 225 (396)
..+.. ..+..|.++.... +...|+.++..|.++...+..... +.....+.....+..+... .....++..+
T Consensus 74 i~~~i~L-~~~e~Iv~~~~~~-~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T 151 (256)
T 1zvt_A 74 LTGKLTL-PPGATVDHMLMES-DDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAIT 151 (256)
T ss_dssp GGGTCCC-CTTCCEEEEECCC-TTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEE
T ss_pred eeeeecC-CCCCEEEEEEEeC-CCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEc
Confidence 11122 2334677775444 566788889999999988754221 1111112223445555454 3455788888
Q ss_pred CCCcEEEEEccc
Q 016032 226 QDNRLRIWDSIF 237 (396)
Q Consensus 226 ~d~~i~iwd~~~ 237 (396)
.+|.+..+....
T Consensus 152 ~~G~~lrf~~~e 163 (256)
T 1zvt_A 152 QAGRMLMFPVSD 163 (256)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCeEEEEEHHH
Confidence 899988888764
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=36.31 E-value=1.8e+02 Score=23.93 Aligned_cols=154 Identities=14% Similarity=0.126 Sum_probs=86.3
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCcccc--eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEecCCeEEEEeCC---CC
Q 016032 74 PTNDGTVYAASSDGTVSCTDLETGLALS--LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADNFGFLYLVDAR---TN 148 (396)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~i~d~~---~~ 148 (396)
|+ ...+++.+.+|.|+--.+...+... .+..... ..+..+........++..+..|.++-+... ..
T Consensus 3 ~~-e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~--------D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~ 73 (323)
T 1wp5_A 3 AS-EDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT--------DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDI 73 (323)
T ss_dssp SC-CEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT--------CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBC
T ss_pred cC-CcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC--------CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCC
Confidence 45 6788899999999877654221110 0111111 124445455556678888888887666543 22
Q ss_pred CC------CccceeeecCCccEEEEEeccC--CCCEEEEeeCCCcEEEEecCCCCCCC---ccc--cCCCCCceeEEEEc
Q 016032 149 SR------SGEAILIHRKGSKVVGLHCNPI--QPELLLSCGNDHFARIWDIRRLEAGS---SLC--DLPHKRVVNSAYFS 215 (396)
Q Consensus 149 ~~------~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~---~~~--~~~~~~~i~~~~~~ 215 (396)
.. +...+.. ..+..|.++...+. ++.+++..+..|.++--.+....... -+. .+...+.+..+...
T Consensus 74 ~r~a~G~~i~~~i~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~ 152 (323)
T 1wp5_A 74 RWKDLGQHIANIIPI-DRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLT 152 (323)
T ss_dssp CTTSCCEEGGGTSCC-CTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEE
T ss_pred CCCCCCcChhhccCC-CCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEe
Confidence 11 1111122 22335665533331 25678888999999998875432211 111 12223555555555
Q ss_pred CCCCEEEEEeCCCcEEEEEccc
Q 016032 216 PSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 216 ~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.....|+..+.+|.+..+....
T Consensus 153 ~~~~~i~l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 153 DGMNELFLVTHNGYALWFDESE 174 (323)
T ss_dssp CSCSEEEEEETTSEEEEEEGGG
T ss_pred CCCCEEEEEeCCCcEEEEEHHH
Confidence 5556788888899998888764
No 386
>2z5e_A Proteasome assembling chaperone 3; beta sandwich, homodimer; 2.00A {Homo sapiens}
Probab=32.31 E-value=50 Score=22.61 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=35.2
Q ss_pred CCCCCCCCCccceeeeccccCCeEEEEecCCCCcEEEEEeCCCcEEE
Q 016032 1 MKPAHVIPDQVNCAVIRYHSRRVTCLEFHPTNNHILLSGDKKGQVGV 47 (396)
Q Consensus 1 ~~p~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~i 47 (396)
|.+.++++.+.....+.|+...|.+..|+ +++|++-+..|.+--
T Consensus 1 ~~~~~pv~~kq~s~~I~Gv~Tevv~~~Fs---D~ilV~VTQ~Gk~Gt 44 (122)
T 2z5e_A 1 MEDTPLVISKQKTEVVCGVPTQVVCTAFS---SHILVVVTQFGKMGT 44 (122)
T ss_dssp CCSCCSSCEEEEEEEETTEEEEEEEEECS---SEEEEEEESTTCCCE
T ss_pred CCCCCCcceeEEEEEECCeeeEEEEEecC---CEEEEEEEeCCeeeE
Confidence 45677888888888999998899999986 278999998887543
No 387
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=31.61 E-value=2.2e+02 Score=23.45 Aligned_cols=195 Identities=12% Similarity=0.125 Sum_probs=104.3
Q ss_pred CCCCcEEEEEeCCCcEEEeecccce---eeeEecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC---CCC------
Q 016032 30 PTNNHILLSGDKKGQVGVWDFYKVS---EKIVYGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL---ETG------ 97 (396)
Q Consensus 30 ~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~---~~~------ 97 (396)
|+. .++++.+.+|.|+--.+..-. ....-.. -...+..+..... .+.|+..+..|.+.-+.. ...
T Consensus 3 ~~e-~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t-~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASE-DVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNT-KDVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCC-EEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEET-TSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCC-cEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECC-CCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 445 478888999999877654321 1111112 2334444444444 566667777887655543 221
Q ss_pred cccc-eeecCCCCCCCCCcceeeeEE-EeCC--CCCEEEEEecCCeEEEEeCCCCCCCc-----cceeeecCCccEEEEE
Q 016032 98 LALS-LMNVNPNGWHGPRTWRMLYGM-DINP--EKGVVLVADNFGFLYLVDARTNSRSG-----EAILIHRKGSKVVGLH 168 (396)
Q Consensus 98 ~~~~-~~~~~~~~~~~~~~~~~v~~~-~~~~--~~~~l~~~~~~g~i~i~d~~~~~~~~-----~~~~~~~~~~~i~~~~ 168 (396)
.++. .+.+... ..|.++ ...+ ++.+++.++..|.++-..+....... ..+.... +..+..+.
T Consensus 80 ~~i~~~i~L~~~--------e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~ 150 (323)
T 1wp5_A 80 QHIANIIPIDRD--------EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVH 150 (323)
T ss_dssp EEGGGTSCCCTT--------CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEE
T ss_pred cChhhccCCCCC--------CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEE
Confidence 1111 1111111 114433 3332 36689999999999998875432211 1111222 24555555
Q ss_pred eccCCCCEEEEeeCCCcEEEEecCCCCC------CCccccCCCCCceeEEEEcCCCC-EEEEEeCCCcEEEEEccc
Q 016032 169 CNPIQPELLLSCGNDHFARIWDIRRLEA------GSSLCDLPHKRVVNSAYFSPSGS-KILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 169 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 237 (396)
... ....++..+.+|.+..+....-.. +...-.+.....|.++..-+++. .|++.+..|..+..++..
T Consensus 151 ~~~-~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 151 LTD-GMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEC-SCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EeC-CCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 544 456677788889988887643211 11111122344566665444444 677788888888877754
No 388
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.54 E-value=1.1e+02 Score=28.25 Aligned_cols=58 Identities=3% Similarity=0.030 Sum_probs=37.4
Q ss_pred CEEEEeeCCCcEE-EEecCCCCC-------CCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEE
Q 016032 175 ELLLSCGNDHFAR-IWDIRRLEA-------GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRI 232 (396)
Q Consensus 175 ~~l~~~~~d~~i~-~wd~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 232 (396)
..++.|+.+|.|. +.-...... ...+..+....+|..|.++++...|++++..+.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888999875 332221110 112223356678999999999999999998875554
No 389
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=29.72 E-value=3.6e+02 Score=25.43 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=74.2
Q ss_pred CcccceeEEEEecCCCcEEEEEeCCCeEEEEECCCCcccceeecCC-CCCCCCC--cceeeeEEEeCCC-CCEEEEEecC
Q 016032 62 IHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDLETGLALSLMNVNP-NGWHGPR--TWRMLYGMDINPE-KGVVLVADNF 137 (396)
Q Consensus 62 ~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~--~~~~v~~~~~~~~-~~~l~~~~~~ 137 (396)
+-.+.|..|.++|.+...++.+...|.|...+ +.|+.-..+.... ....+.. ....+.++++.|. ...++++...
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 35568999999998667777777666554332 2232211111100 0000000 1123888999884 3444443321
Q ss_pred -----CeEEEEeCCCCCCCccceeee-c-----CC-ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCC-
Q 016032 138 -----GFLYLVDARTNSRSGEAILIH-R-----KG-SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP- 204 (396)
Q Consensus 138 -----g~i~i~d~~~~~~~~~~~~~~-~-----~~-~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~- 204 (396)
....||--..+....+..... . .+ .....++++|.+...++++...+.|.. ....++.-..+..+.
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPD 175 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCC
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCcc
Confidence 112333322222112111110 0 00 011357888855666666665544332 111111111111111
Q ss_pred ---CCCceeEEEEcCC-CCEEEEEeCCC
Q 016032 205 ---HKRVVNSAYFSPS-GSKILTTSQDN 228 (396)
Q Consensus 205 ---~~~~i~~~~~~~~-~~~l~~~~~d~ 228 (396)
....+..|+++|. ...++++..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1234778899884 34455555554
No 390
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=27.55 E-value=2.6e+02 Score=23.05 Aligned_cols=165 Identities=12% Similarity=0.071 Sum_probs=94.4
Q ss_pred ccceeEEEEecC--CCcEEEEEeCCCeEEEEECCCCcccc-----eeecCCCCCCCCCcceeeeEEEeCCCCCEEEEEec
Q 016032 64 SCIVNNIRFNPT--NDGTVYAASSDGTVSCTDLETGLALS-----LMNVNPNGWHGPRTWRMLYGMDINPEKGVVLVADN 136 (396)
Q Consensus 64 ~~~v~~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 136 (396)
...|..+...++ ...+++..+.+|.++.-.+....... .+..... ..+..+........++..+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~--------D~lv~~~~~~~~d~ill~T~ 165 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN--------DELVGAVLCSAGDDLLLVSA 165 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT--------CCEEEEEEECTTCEEEEEET
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC--------CEEEEEEEecCCCEEEEEEC
Confidence 455655544331 26789999999999998876532211 1111111 11444444455677888899
Q ss_pred CCeEEEEeCC--CCCCCccc-----eeeecCCccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCC----Ccccc--C
Q 016032 137 FGFLYLVDAR--TNSRSGEA-----ILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAG----SSLCD--L 203 (396)
Q Consensus 137 ~g~i~i~d~~--~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----~~~~~--~ 203 (396)
.|.+..+... .-...... ......+..|.++...+ .+..++..+..|.++.-.+...... .-+.. +
T Consensus 166 ~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l 244 (327)
T 3uc1_A 166 NGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMY 244 (327)
T ss_dssp TSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCC
T ss_pred CCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEe
Confidence 9998888776 32211110 01112344677776666 5668888899999988876533221 11111 1
Q ss_pred -CCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 204 -PHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 204 -~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
...+.+..+........++..+.+|.+.-++...
T Consensus 245 ~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 245 DRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 1133454444444455666677788888887754
No 391
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=26.73 E-value=2.6e+02 Score=22.74 Aligned_cols=193 Identities=13% Similarity=0.093 Sum_probs=100.9
Q ss_pred cEEEEEeCCCcEEEeecccceeeeE-------ecCCcccceeEEEEecCCCcEEEEEeCCCeEEEEEC---CCC------
Q 016032 34 HILLSGDKKGQVGVWDFYKVSEKIV-------YGNIHSCIVNNIRFNPTNDGTVYAASSDGTVSCTDL---ETG------ 97 (396)
Q Consensus 34 ~~l~s~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~---~~~------ 97 (396)
.++++.+.+|.|+--.+..-..... +.......+..+..... .+.|+..+..|.+.-+.. ...
T Consensus 4 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~-~~~ll~fT~~G~~~~~~~~elp~~~~~a~G 82 (307)
T 1zi0_A 4 DVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANT-HDHILCFSSRGRVYSMKVYQLPEATRGARG 82 (307)
T ss_dssp EEEEEEETTSEEEEEECC--------------------CCEEEEEEEET-TCEEEEEETTSEEEEEEGGGSCCCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECC-CCEEEEEECCCEEEEEEhhHCcCCCCCCCC
Confidence 4678888999998666543221110 00012233434433333 556666667777655543 222
Q ss_pred cccc-eeecCCCCCCCCCcceeeeEEE-eC--CCCCEEEEEecCCeEEEEeCCCCCCCc----cceeeecCCccEEEEEe
Q 016032 98 LALS-LMNVNPNGWHGPRTWRMLYGMD-IN--PEKGVVLVADNFGFLYLVDARTNSRSG----EAILIHRKGSKVVGLHC 169 (396)
Q Consensus 98 ~~~~-~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~l~~~~~~g~i~i~d~~~~~~~~----~~~~~~~~~~~i~~~~~ 169 (396)
..+. .+.+... ..|.++. .. .+..+++..+..|.++-..+....... ..+..... ..+..+..
T Consensus 83 ~~i~~~l~l~~~--------e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~ 153 (307)
T 1zi0_A 83 RPIVNLLPLEQD--------ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDL 153 (307)
T ss_dssp EEGGGTSCCCTT--------CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEE
T ss_pred eEhhhccCCCCC--------CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEE
Confidence 1111 1111111 1144443 32 356789999999999998775432211 11112222 45555555
Q ss_pred ccCCCCEEEEeeCCCcEEEEecCCCCC------CCccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEEEEccc
Q 016032 170 NPIQPELLLSCGNDHFARIWDIRRLEA------GSSLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRIWDSIF 237 (396)
Q Consensus 170 ~~~~~~~l~~~~~d~~i~~wd~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 237 (396)
.. ....++..+.+|.+..+....-.. +...-.+.....|.++...+++..|++.+..|.++-.++..
T Consensus 154 ~~-~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 154 TS-GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp EC-TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred eC-CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 54 455677777888888887643211 11111123445666665555566788888999998887754
No 392
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.64 E-value=1.7e+02 Score=25.87 Aligned_cols=59 Identities=12% Similarity=0.213 Sum_probs=36.1
Q ss_pred CEEEEEecCCeEEEEeCC-CCC------CCccceeeecCCccEEEEEeccCCCCEEEEeeCCCcEEE
Q 016032 129 GVVLVADNFGFLYLVDAR-TNS------RSGEAILIHRKGSKVVGLHCNPIQPELLLSCGNDHFARI 188 (396)
Q Consensus 129 ~~l~~~~~~g~i~i~d~~-~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~~ 188 (396)
..++.|+.+|.|.-.-+. ... ...+.+.....+.+|..|.+++ +...|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCeEEEE
Confidence 457778889976544332 211 1111122222345889999999 8889999988776665
No 393
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=26.60 E-value=1.5e+02 Score=27.42 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=36.1
Q ss_pred CEEEEEecCCeEEEE-eCCCCCCCccceeeecCCccEEEEEeccCCC--CEEEEeeCCCcEEE
Q 016032 129 GVVLVADNFGFLYLV-DARTNSRSGEAILIHRKGSKVVGLHCNPIQP--ELLLSCGNDHFARI 188 (396)
Q Consensus 129 ~~l~~~~~~g~i~i~-d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~d~~i~~ 188 (396)
..++.|+.+|.|.-. .........+.......+.+|..|.+++ .. ..|++++..+.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~-~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSS-KKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECC-SSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEecc-CCCccEEEEEEcCeEEEE
Confidence 367788899976433 4333222222222233445788899998 66 78888887776665
No 394
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=25.98 E-value=1.7e+02 Score=26.68 Aligned_cols=58 Identities=7% Similarity=-0.009 Sum_probs=37.3
Q ss_pred CEEEEeeCCCcEEEEecCCCC-C--CC---ccccCCCCCceeEEEEcCCCCEEEEEeCCCcEEE
Q 016032 175 ELLLSCGNDHFARIWDIRRLE-A--GS---SLCDLPHKRVVNSAYFSPSGSKILTTSQDNRLRI 232 (396)
Q Consensus 175 ~~l~~~~~d~~i~~wd~~~~~-~--~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 232 (396)
..+..|+.+|.|.-.-+.... . .. .+..+....+|..+.++++...|++++..+.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467788899987644332211 1 11 1222235678999999999999999987765555
No 395
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=22.37 E-value=2.1e+02 Score=25.62 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=42.1
Q ss_pred cEEEEEeccCCC-CEEEEeeCCCcEEEEecCCCCCC---CccccCCCCCce-eEEEEcCCCCEEEEEeCCCcEEE
Q 016032 163 KVVGLHCNPIQP-ELLLSCGNDHFARIWDIRRLEAG---SSLCDLPHKRVV-NSAYFSPSGSKILTTSQDNRLRI 232 (396)
Q Consensus 163 ~i~~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i 232 (396)
..+.|+....++ ..++.|+.+|.|.-.-+...... ..+. +....+| ..+.++++...|++++..+.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~-v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQS-IQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEE-SSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeec-cCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 355666554233 45667888998865444311111 1122 1345677 48999999999999988776655
No 396
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=20.22 E-value=4.3e+02 Score=23.01 Aligned_cols=158 Identities=9% Similarity=0.048 Sum_probs=73.0
Q ss_pred EEecCCCcEEEEEeCCCeEEEEECCCCcc-----cceeecCCCCCCCCCcceeeeEEEeCCC--------CCEEEEEecC
Q 016032 71 RFNPTNDGTVYAASSDGTVSCTDLETGLA-----LSLMNVNPNGWHGPRTWRMLYGMDINPE--------KGVVLVADNF 137 (396)
Q Consensus 71 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~l~~~~~~ 137 (396)
.++ + ..+.+..+ ...+.||....... ...+.++.... .......++.+.+. ..-+++.+.+
T Consensus 44 ~i~-~-~GyAlvv~-~~~l~VW~y~~~~~~~~~~c~~lpLp~sd~---~~~~~lvsi~~~~~~~~~~s~~~pGlliVspt 117 (450)
T 1xks_A 44 NID-E-GGWACLVC-KEKLIIWKIALSPITKLSVCKELQLPPSDF---HWSADLVALSYSSPSGEAHSTQAVAVMVATRE 117 (450)
T ss_dssp EEC-T-TSEEEEEE-TTEEEEEECCSSCCGGGCCEEEEECCCCSS---CCCGGGEEEEECC-------CTTEEEEEECTT
T ss_pred EEC-C-CcEEEEEe-CCeEEEEeecCCCCCCcccceeccCCcccc---ccCCcEEEEEcCCCccccccCCCceEEEEcCC
Confidence 455 4 55555555 45799999886621 11223332211 11111223322222 2234444449
Q ss_pred CeEEEEeCCCCCCCccceeeecCC-ccEEEEEeccCCCCEEEEeeCCCcEEEEecCCCCCCCccccCC-C----------
Q 016032 138 GFLYLVDARTNSRSGEAILIHRKG-SKVVGLHCNPIQPELLLSCGNDHFARIWDIRRLEAGSSLCDLP-H---------- 205 (396)
Q Consensus 138 g~i~i~d~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~---------- 205 (396)
|.|+.|.--............-.+ ..++.+.-. ++.-++.+...|.+..-.++ ++..-..+.+. .
T Consensus 118 G~VryWesIs~~~~~~ei~~~L~~~E~vt~l~n~--epaGfIlaTStgrl~~lsir-Gkp~l~~~~l~~~~G~l~gi~~~ 194 (450)
T 1xks_A 118 GSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAV--QGGSFILSSSGSQLIRLIPE-SSGKIHQHILPQGQGMLSGIGRK 194 (450)
T ss_dssp CEEEEESCTTCTTCCEEEECC----CCEEEEEEE--TTTEEEEEETTCCEEEEEEC-TTSCEEEEECTTCCCC-------
T ss_pred ccEEEccccCCCCceEEEEecCCCCceEEEEeec--CCceEEEEeccceEEEEEec-CCceEEEEEecCCCccccccccc
Confidence 999999855432111111211112 356655443 34445555556777766665 33211111110 0
Q ss_pred ----------CCc--eeEEEEcCCCCEEEEEeCCCcEEEEEcccc
Q 016032 206 ----------KRV--VNSAYFSPSGSKILTTSQDNRLRIWDSIFG 238 (396)
Q Consensus 206 ----------~~~--i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 238 (396)
... ..++.+...++.+++.+. +.+..|++..+
T Consensus 195 ~sSl~G~~s~~~~ia~v~~~~~~g~r~v~ilT~-~~lq~W~l~~~ 238 (450)
T 1xks_A 195 VSSLFGILSPSSDLTLSSVLWDRERSSFYSLTS-SNISKWELDDS 238 (450)
T ss_dssp -----------CCCCEEEEEEETTTTEEEEEES-SEEEEEEECSS
T ss_pred ccccccccCCCcceEEEEeccCCCcEEEEEEcC-CceEEEEecCC
Confidence 011 122444456677776665 45999999544
Done!