BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016035
(396 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p
pdb|1K9Y|A Chain A, The Papase Hal2p Complexed With Magnesium Ions And
Reaction Products: Amp And Inorganic Phosphate
pdb|1K9Z|A Chain A, The Papase Hal2p Complexed With Zinc Ions
pdb|1KA0|A Chain A, The Papase Hal2p Complexed With A Sodium Ion And The
Reaction Product Amp
pdb|1KA1|A Chain A, The Papase Hal2p Complexed With Calcium And Magnesium Ions
And Reaction Substrate: Pap
Length = 357
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 100 KELDVAVRAVQMACFLCQXXXXXXXXXXXXXXXXXDDNSPVTVADWSVQATVSWLLSQSF 159
+EL VA +AV+ A L + +DNSPVT D++ Q + + +F
Sbjct: 5 RELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNF 64
Query: 160 GSENVSIVAEEDVVSLSKADAAGLLKAVV--NTVNDCLAEAPRFGLQGPAMALGASE-VI 216
+ V V EE LS A +G+L + + V + + F L + E V
Sbjct: 65 PDDKV--VGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVR 122
Query: 217 EAIGRCNSSGGPTGRFWALDPVDGTLGFVRGDQYAVALALIENGEAVLGVLGCPNYPMR- 275
+ I N GG GRFW LDP+DGT GF+RG+Q+AV LALI +G LG +GCPN +
Sbjct: 123 QIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGEQFAVCLALIVDGVVQLGCIGCPNLVLSS 182
Query: 276 --------KEWLSYQHRYHRIISKLTPPTS--ESWDK 302
E Y R R + P+S ESW K
Sbjct: 183 YGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTK 219
>pdb|2P3N|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3N|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3N|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3N|D Chain D, Thermotoga Maritima Impase Tm1415
pdb|2P3V|A Chain A, Thermotoga Maritima Impase Tm1415
pdb|2P3V|B Chain B, Thermotoga Maritima Impase Tm1415
pdb|2P3V|C Chain C, Thermotoga Maritima Impase Tm1415
pdb|2P3V|D Chain D, Thermotoga Maritima Impase Tm1415
Length = 256
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 231 RFWALDPVDGTLGFVRG-DQYAVALALIENGEAVLGVLGCP 270
R W +DP+DGT+ FV G ++++LA +ENGE LGV+ P
Sbjct: 74 RLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAP 114
>pdb|3B8B|A Chain A, Crystal Structure Of Cysq From Bacteroides
Thetaiotaomicron, A Bacterial Member Of The Inositol
Monophosphatase Family
Length = 292
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 232 FWALDPVDGTLGFV-RGDQYAVALALIENGEAVLGVLGCP 270
W +DP+DGT F+ R ++ V +AL++N V GV+ P
Sbjct: 101 LWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVXGVIYVP 140
>pdb|2FVZ|A Chain A, Human Inositol Monophosphosphatase 2
pdb|2FVZ|B Chain B, Human Inositol Monophosphosphatase 2
pdb|2FVZ|C Chain C, Human Inositol Monophosphosphatase 2
pdb|2FVZ|D Chain D, Human Inositol Monophosphosphatase 2
Length = 273
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 VAEEDVVSLSKADAAGLLKAVVNTVNDCLAEAPRFGLQGPAMALGASEVIEAIGRCNSSG 226
+ EE VS +K AA L+ + V D + R P+ A E + +C +
Sbjct: 23 LTEEKRVS-TKTSAADLVTETDHLVEDLIISELRERF--PSHRFIAEEAAASGAKCVLTH 79
Query: 227 GPTGRFWALDPVDGTLGFV-RGDQYAVALALIENGEAVLGVL 267
PT W +DP+DGT FV R AV++ E GV+
Sbjct: 80 SPT---WIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 118
>pdb|2CZH|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZH|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Phosphate Ion (Orthorhombic Form)
pdb|2CZI|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) With Calcium And Phosphate Ions
pdb|2CZK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Trigonal Form)
pdb|2DDK|A Chain A, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
pdb|2DDK|B Chain B, Crystal Structure Of Human Myo-Inositol Monophosphatase 2
(Impa2) (Orthorhombic Form)
Length = 299
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 7/134 (5%)
Query: 135 DDNSPVTVADWSVQATVSWLLSQSFGSENVSIVAEEDVVSLSKADAAGLLKAVVNTVNDC 194
+D + + W + L+ G + EE VS +K AA L+ + V D
Sbjct: 17 EDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVS-TKTSAADLVTETDHLVEDL 75
Query: 195 LAEAPRFGLQGPAMALGASEVIEAIGRCNSSGGPTGRFWALDPVDGTLGFV-RGDQYAVA 253
+ R P+ A E + +C + PT W +DP+DGT FV R AV+
Sbjct: 76 IISELRERF--PSHRFIAEEAAASGAKCVLTHSPT---WIIDPIDGTCNFVHRFPTVAVS 130
Query: 254 LALIENGEAVLGVL 267
+ E GV+
Sbjct: 131 IGFAVRQELEFGVI 144
>pdb|3T0J|A Chain A, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|B Chain B, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|C Chain C, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
pdb|3T0J|D Chain D, Crystal Structure Of Inositol Monophosphatase - Ii From
Staphylococcus Aureus Mssa476
Length = 283
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 230 GRFWALDPVDGTLGFV-RGDQYAVALALIENGEAVLGVL 267
G W +DP+DGTL FV + + +A+++ + +G+ G +
Sbjct: 85 GTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFV 123
>pdb|3RYD|A Chain A, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
pdb|3RYD|C Chain C, Crystal Strucutre Of Ca Bound Impase Family Protein From
Staphylococcus Aureus
Length = 273
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 230 GRFWALDPVDGTLGFVRGDQ-YAVALALIENGEAVLGVLGCPNYPMRKEW 278
W +DP+DGT V+ + Y + LA G+ +L + +YP +K +
Sbjct: 90 NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVY--DYPHKKLY 137
>pdb|3QMF|A Chain A, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
pdb|3QMF|B Chain B, Crystal Strucuture Of An Inositol Monophosphatase Family
Protein (Sas2203) From Staphylococcus Aureus Mssa476
Length = 273
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 230 GRFWALDPVDGTLGFVRGDQ-YAVALALIENGEAVLGVLGCPNYPMRKEW 278
W +DP+DGT V+ + Y + LA G+ +L + +YP +K +
Sbjct: 90 NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVY--DYPHKKLY 137
>pdb|2PCR|A Chain A, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|B Chain B, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|C Chain C, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
pdb|2PCR|D Chain D, Crystal Structure Of Myo-Inositol-1(Or 4)-Monophosphatase
(Aq_1983) From Aquifex Aeolicus Vf5
Length = 264
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 233 WALDPVDGTLGFVRG-DQYAVALALIENGEAVLGVLGCPNY 272
W +DP+DGT ++ G +AV++ L++ E ++G + P +
Sbjct: 83 WFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYF 123
>pdb|2BJI|A Chain A, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
pdb|2BJI|B Chain B, High Resolution Structure Of Myo-Inositol Monophosphatase,
The Target Of Lithium Therapy
Length = 277
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 233 WALDPVDGTLGFVRGDQY-AVALALIENGEAVLGVL 267
W +DP+DGT FV G + AV++ + N + G++
Sbjct: 87 WIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIV 122
>pdb|2QFL|A Chain A, Structure Of Suhb: Inositol Monophosphatase And Extragenic
Suppressor From E. Coli
Length = 267
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 233 WALDPVDGTLGFV-RGDQYAVALALIENGEAVLGVLGCPNYPMRKEWLS 280
W +DP+DGT F+ R +AV++A+ G + V+ PMR E +
Sbjct: 81 WVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVV---YDPMRNELFT 126
>pdb|4AS5|A Chain A, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|B Chain B, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|C Chain C, Structure Of Mouse Inositol Monophosphatase 1
pdb|4AS5|D Chain D, Structure Of Mouse Inositol Monophosphatase 1
Length = 277
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 233 WALDPVDGTLGFV-RGDQYAVALALIENGEAVLGVL 267
W +DP+DGT FV R AV++ + N E G++
Sbjct: 87 WVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIV 122
>pdb|1JP4|A Chain A, Crystal Structure Of An Enzyme Displaying Both Inositol-
Polyphosphate 1-Phosphatase And 3'-Phosphoadenosine-5'-
Phosphate Phosphatase Activities
Length = 308
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 235 LDPVDGTLGFVRG--DQYAVALALIENGEAVLGVLGCPNY 272
+DPVDGT + G D V + + G+A+ G++ P Y
Sbjct: 116 VDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYY 155
>pdb|2Q74|A Chain A, Mycobacterium Tuberculosis Suhb
pdb|2Q74|B Chain B, Mycobacterium Tuberculosis Suhb
pdb|2Q74|C Chain C, Mycobacterium Tuberculosis Suhb
Length = 299
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 217 EAIGRCNSSGGPTGRF-WALDPVDGTLGFVRG-DQYAVALA 255
E G + + P+ R W LDP+DGT+ FV G YAV++
Sbjct: 84 EGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIG 124
>pdb|3LUZ|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LUZ|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Via Combined Iodide Sad
Molecular Replacement
pdb|3LV0|A Chain A, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
pdb|3LV0|B Chain B, Crystal Structure Of Extragenic Suppressor Protein Suhb
From Bartonella Henselae, Native
Length = 267
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 233 WALDPVDGTLGFVRGDQ-YAVALALIENGEAVLGVLGCP 270
+ +DP+DGT F+ G +AV++AL G+ V GV+ P
Sbjct: 87 FIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNP 125
>pdb|2WEF|A Chain A, Human 3'(2'), 5'-Bisphosphate Nucleotidase 1 (Bpnt1) In
Complex With Amp, Po4 And Magnesium
Length = 311
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 235 LDPVDGTLGFVRG--DQYAVALALIENGEAVLGVLGCPNY 272
+DP+DGT + G D V + + G+A+ GV+ P Y
Sbjct: 112 VDPLDGTKEYTEGLLDNVTVLIGIAYEGKAIAGVINQPYY 151
>pdb|1VDW|A Chain A, A Hypothetical Protein Ph1897 From Pyrococcus Horikoshii
With Similarities For Inositol-1 Monophosphatase
pdb|1VDW|B Chain B, A Hypothetical Protein Ph1897 From Pyrococcus Horikoshii
With Similarities For Inositol-1 Monophosphatase
Length = 254
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 210 LGASEVIEAIGRCNSSGGPTGRFWALDPVDGTLGFVRGDQ-YAVALALIENGEAVLGVLG 268
LG + V E IGR + T +DP+DG+ F+ G +AV++A+ + + +
Sbjct: 61 LGVNVVSEEIGRIDQGSDYT---VVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIY 117
Query: 269 CP 270
P
Sbjct: 118 EP 119
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,972,231
Number of Sequences: 62578
Number of extensions: 424877
Number of successful extensions: 790
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 781
Number of HSP's gapped (non-prelim): 25
length of query: 396
length of database: 14,973,337
effective HSP length: 101
effective length of query: 295
effective length of database: 8,652,959
effective search space: 2552622905
effective search space used: 2552622905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)