Query 016036
Match_columns 396
No_of_seqs 292 out of 1245
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 06:47:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 6E-25 2.1E-29 213.2 14.3 193 126-345 12-216 (280)
2 1xhb_A Polypeptide N-acetylgal 93.3 2 6.9E-05 42.8 15.8 167 166-339 62-253 (472)
3 2d7i_A Polypeptide N-acetylgal 91.5 7.1 0.00024 40.3 17.6 159 167-332 146-324 (570)
4 1qg8_A Protein (spore coat pol 89.9 10 0.00034 33.7 15.8 160 165-338 30-208 (255)
5 2ffu_A Ppgalnact-2, polypeptid 88.5 12 0.00042 37.5 16.2 162 166-338 99-284 (501)
6 3bcv_A Putative glycosyltransf 88.3 8.2 0.00028 33.9 13.1 165 165-339 34-220 (240)
7 4fix_A UDP-galactofuranosyl tr 86.8 17 0.00059 38.4 16.6 125 214-340 258-413 (657)
8 2z86_A Chondroitin synthase; G 81.3 38 0.0013 34.7 16.1 122 216-338 166-324 (625)
9 2z86_A Chondroitin synthase; G 72.4 43 0.0015 34.3 13.4 156 165-338 404-566 (625)
10 4hg6_A Cellulose synthase subu 70.3 68 0.0023 34.6 14.8 131 210-344 225-368 (802)
11 1fo8_A Alpha-1,3-mannosyl-glyc 30.9 1.1E+02 0.0037 29.7 7.3 86 214-309 89-179 (343)
12 2bo4_A Mannosylglycerate synth 29.9 2.3E+02 0.0078 27.9 9.7 163 165-336 28-209 (397)
13 2lnd_A De novo designed protei 27.6 76 0.0026 24.8 4.4 73 133-220 31-103 (112)
14 2pnv_A Small conductance calci 23.2 63 0.0022 22.1 2.9 29 70-101 9-37 (43)
15 4dzn_A Coiled-coil peptide CC- 22.9 71 0.0024 19.9 2.7 28 74-101 3-30 (33)
16 1vf5_H Protein PET N; photosyn 22.2 52 0.0018 20.6 2.0 23 16-38 4-26 (29)
17 2akf_A Coronin-1A; coiled coil 21.7 1.1E+02 0.0038 19.2 3.4 24 74-97 7-30 (32)
18 2c0n_A A197; thermophil protei 21.5 4.5E+02 0.015 23.7 10.3 132 185-329 16-159 (203)
19 2z5i_A TM, general control pro 20.9 90 0.0031 22.0 3.4 23 79-101 11-33 (52)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.92 E-value=6e-25 Score=213.15 Aligned_cols=193 Identities=17% Similarity=0.166 Sum_probs=131.1
Q ss_pred CeeEEEEEeCCCCC-HHHHHHHHHHhccCcccchhhhccCceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEeccc--
Q 016036 126 KYFMVIGINTAFSS-RKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI-- 202 (396)
Q Consensus 126 ~~~LlI~V~S~p~~-~~rR~aIR~TW~~~~~~~~~l~~~~~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~-- 202 (396)
.-.++|+|+|++++ .+|+++||+||++.+.. . .||.+... +.. +... ..++++..++.
T Consensus 12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~--------~---~fifsd~~--d~~----l~~~--~~~~~~~~~~~~~ 72 (280)
T 2j0a_A 12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ--------Q---TFIFTDSP--DER----LQER--LGPHLVVTQCSAE 72 (280)
T ss_dssp GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG--------G---EEEEESSC--CHH----HHHH--HGGGEEECCC---
T ss_pred cccEEEEEECcHHHHHHHHHHHHHHHhccCCC--------c---eEEEcCCC--ccc----cccc--ccccceecccccc
Confidence 45788899999984 57889999999987631 1 23333222 222 2222 35678887764
Q ss_pred ccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHHHHhcCCCCceEEEEeecCcccccCCCccccCcccccC
Q 016036 203 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFG 282 (396)
Q Consensus 203 DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L~~~~~~~~lY~G~~~~~pv~r~~~~K~~~p~~~~f~ 282 (396)
+++.+++.|+...+.+.. +++++|++|+|||+|||+++|+.+|...++.+++|+|+.....+++ .++++|.+.+
T Consensus 73 ~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~~-- 146 (280)
T 2j0a_A 73 HSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQRT-- 146 (280)
T ss_dssp ----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC--------------------
T ss_pred ccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccccc--
Confidence 467889999999998754 3599999999999999999999999999999999999975332222 1345554322
Q ss_pred CCCCCcCCCc-CCCceeeCHHHHHHHHHhcccc-------CCCCchhHHHHHHHh-cCCCeEecCCCcccCC
Q 016036 283 EIGNKYFRHA-TGQLYALSKDLATYISINQHLL-------HKYANEDVSLGSWFI-GLDVEHVDDRRLCCGT 345 (396)
Q Consensus 283 d~~~~YP~y~-~G~gYvlS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~i~~~~f~~~~ 345 (396)
+...|+ || +|+|||||++++++|+...... .....||+++|.|+. .+||.+.+.+.|....
T Consensus 147 -~~~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~ 216 (280)
T 2j0a_A 147 -KLVRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHL 216 (280)
T ss_dssp -----CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSS
T ss_pred -cccccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCC
Confidence 223454 66 6789999999999999754322 223469999999998 9999999999987543
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=93.30 E-value=2 Score=42.85 Aligned_cols=167 Identities=14% Similarity=0.102 Sum_probs=88.0
Q ss_pred eEEEEEeccCCCCCcchHHHHHHHHhHcC-CEEEecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHH
Q 016036 166 IIIRFVIGHSATSGGILDKAIDAEEKMHG-DFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGM 244 (396)
Q Consensus 166 i~v~FvlG~s~~~~~~~~~~I~~E~~~~~-DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~ 244 (396)
..++.|-..|. ++.....|++-.+.+. .+..+...+.. .+ -.+...+.+.-..+|++..|+|+.+.++.|..
T Consensus 62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~-G~----~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS-GL----IRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC-CH----HHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCC-Ch----HHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 45666665544 2234455655556666 46555544332 12 22334444445789999999999999887777
Q ss_pred HHHhcCCCCc-eEEEEee--c-CcccccCC-------CccccCcccc-c---------CC-CCCCcCCCcCCCceeeCHH
Q 016036 245 TLAAHRTKPR-VYVGCMK--S-GPVLARKG-------VKYYEPEYWK-F---------GE-IGNKYFRHATGQLYALSKD 302 (396)
Q Consensus 245 ~L~~~~~~~~-lY~G~~~--~-~pv~r~~~-------~K~~~p~~~~-f---------~d-~~~~YP~y~~G~gYvlS~d 302 (396)
++......+. +..|.+. . ........ -.|.....+. + .+ ......+++.|+.++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 7766543333 3333321 1 10000000 0111110000 0 00 0022345788999999999
Q ss_pred HHHHHHHhccccCCCCchhHHHHHHHh--cCCCeEecCC
Q 016036 303 LATYISINQHLLHKYANEDVSLGSWFI--GLDVEHVDDR 339 (396)
Q Consensus 303 la~~I~~~~~~l~~~~~EDV~vG~~l~--~L~v~~i~~~ 339 (396)
+...+---...+..+..||+-++.=+. |..+..+...
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~ 253 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCS 253 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCc
Confidence 998875444444445579988876554 4444444443
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=91.50 E-value=7.1 Score=40.34 Aligned_cols=159 Identities=12% Similarity=0.013 Sum_probs=84.6
Q ss_pred EEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHHH
Q 016036 167 IIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTL 246 (396)
Q Consensus 167 ~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L 246 (396)
.++.|-..|. ++++...|++..+.+..|..+...+.. .+.. +...+.+.-..+|++..|+|+.++++-|..++
T Consensus 146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~~~----A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll 218 (570)
T 2d7i_A 146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-GLIR----TRMLGASVATGDVITFLDSHCEANVNWLPPLL 218 (570)
T ss_dssp EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-CHHH----HHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-CHHH----HHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence 5666665554 344355666666667666555543332 2222 23333333468999999999999987776666
Q ss_pred HhcCCCCceEEEE-ee--cCc-c-ccc---CC----Ccccc-----C--cccccCCC-CCCcCCCcCCCceeeCHHHHHH
Q 016036 247 AAHRTKPRVYVGC-MK--SGP-V-LAR---KG----VKYYE-----P--EYWKFGEI-GNKYFRHATGQLYALSKDLATY 306 (396)
Q Consensus 247 ~~~~~~~~lY~G~-~~--~~p-v-~r~---~~----~K~~~-----p--~~~~f~d~-~~~YP~y~~G~gYvlS~dla~~ 306 (396)
......+.+.+|. +. .+. . .+. .. ..|.. + ....+.++ .....+++.|++.++++++...
T Consensus 219 ~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 298 (570)
T 2d7i_A 219 DRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE 298 (570)
T ss_dssp HHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred HHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence 6543333444443 21 110 0 000 00 00100 0 00000000 0112346789999999999988
Q ss_pred HHHhccccCCCCchhHHHHHHHhcCC
Q 016036 307 ISINQHLLHKYANEDVSLGSWFIGLD 332 (396)
Q Consensus 307 I~~~~~~l~~~~~EDV~vG~~l~~L~ 332 (396)
+---...+..+..||+-+..-+...|
T Consensus 299 iGgfDe~~~~~g~ED~dl~~Rl~~~G 324 (570)
T 2d7i_A 299 LGGYDPGLEIWGGEQYEISFKVWMCG 324 (570)
T ss_dssp TTSSCTTCCSSSSHHHHHHHHHHHTT
T ss_pred cCCCCCcccccCcchHHHHHHHHhCC
Confidence 75434444444579998876664443
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=89.90 E-value=10 Score=33.68 Aligned_cols=160 Identities=8% Similarity=-0.112 Sum_probs=84.7
Q ss_pred ceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccC-----CchhHHHHHHHHHHHhcCCceEEEEeccceeEeH
Q 016036 165 GIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY-----LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNL 239 (396)
Q Consensus 165 ~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY-----~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv 239 (396)
.+.++.|-..|. +... .+.++...+..|..+.....- .|.. .-..+..+.+..+.+|++.+|+|.++.+
T Consensus 30 ~~eiivvDd~S~---d~t~-~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a~g~~i~~lD~Dd~~~~ 103 (255)
T 1qg8_A 30 DFELFIMDDNSN---EETL-NVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMAEGEYITYATDDNIYMP 103 (255)
T ss_dssp CEEEEEEECSCC---HHHH-HHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred ceEEEEEECCCC---chHH-HHHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence 466777765554 2222 233333234555444432100 2322 2334555555458899999999999998
Q ss_pred HHHHHHHHhcC--CCCceEEEEee----c--CcccccCCCccccCcccccCCCCCCcCCCcCCCceeeCHHHHHHHHHhc
Q 016036 240 ATLGMTLAAHR--TKPRVYVGCMK----S--GPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQ 311 (396)
Q Consensus 240 ~~L~~~L~~~~--~~~~lY~G~~~----~--~pv~r~~~~K~~~p~~~~f~d~~~~YP~y~~G~gYvlS~dla~~I~~~~ 311 (396)
+.|...+.... +.-.+..|.+. . +.+. ..+..|.... ......+..|++.++.++++..+-...
T Consensus 104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~rr~~~~~~g~~f 175 (255)
T 1qg8_A 104 DRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAAQV----TWNAPCAIDHCSVMHRYSVLEKVKEKF 175 (255)
T ss_dssp THHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCCSC----BSCCTTTSCGGGEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchHHH----HHhhcCCCccceEEEEHHHHHhhcccc
Confidence 88777766543 23344445432 1 1111 1111221110 112344578999999999999876211
Q ss_pred -----cccCCCCchhHHHHHHHhcCC-CeEecC
Q 016036 312 -----HLLHKYANEDVSLGSWFIGLD-VEHVDD 338 (396)
Q Consensus 312 -----~~l~~~~~EDV~vG~~l~~L~-v~~i~~ 338 (396)
........||..+..-+...+ +..++.
T Consensus 176 ~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 208 (255)
T 1qg8_A 176 GSYWDESPAFYRIGDARFFWRVNHFYPFYPLDE 208 (255)
T ss_dssp SSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEE
T ss_pred cccccCCcccchHHHHHHHHHHHHhCCEEEecC
Confidence 011123579998877765443 444444
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=88.54 E-value=12 Score=37.51 Aligned_cols=162 Identities=12% Similarity=-0.027 Sum_probs=84.2
Q ss_pred eEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHH
Q 016036 166 IIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMT 245 (396)
Q Consensus 166 i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~ 245 (396)
..+++|-..|. ++++. ...+.+..+..+...+. .- .-.+...+...-..+|++.+|+|+.+.++.|..+
T Consensus 99 ~EIIvVDDgS~--D~t~~----~~~~~~~~v~vi~~~~n---~G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l 167 (501)
T 2ffu_A 99 KEIILVDDYSN--DPEDG----ALLGKIEKVRVLRNDRR---EG--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167 (501)
T ss_dssp EEEEEEECSCS--CTHHH----HGGGGBTTEEEEECSSC---CH--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred eeEEEEECCCC--chHHH----HHHhcCCCEEEEECCCC---cC--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence 45677765554 23332 22345566655544332 22 1233444444457899999999999998877777
Q ss_pred HHhcCCCCceEEEE-ee--c-Cccc--------cc-----CCCccc-cCccc---ccCCC-CCCcCCCcCCCceeeCHHH
Q 016036 246 LAAHRTKPRVYVGC-MK--S-GPVL--------AR-----KGVKYY-EPEYW---KFGEI-GNKYFRHATGQLYALSKDL 303 (396)
Q Consensus 246 L~~~~~~~~lY~G~-~~--~-~pv~--------r~-----~~~K~~-~p~~~---~f~d~-~~~YP~y~~G~gYvlS~dl 303 (396)
+......+...++. +. . .... +. ...+|. .+... ...++ .....+++.|++.++++++
T Consensus 168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 247 (501)
T 2ffu_A 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY 247 (501)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence 76653333333332 21 1 0000 00 000110 11000 00000 1122356789999999999
Q ss_pred HHHHHHhccccCCCCchhHHHHHHHh--cCCCeEecC
Q 016036 304 ATYISINQHLLHKYANEDVSLGSWFI--GLDVEHVDD 338 (396)
Q Consensus 304 a~~I~~~~~~l~~~~~EDV~vG~~l~--~L~v~~i~~ 338 (396)
...+-.-...+..+..||+-+..-+. |..+..+..
T Consensus 248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 284 (501)
T 2ffu_A 248 FEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPC 284 (501)
T ss_dssp HHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccC
Confidence 98886444444445589998876554 444444443
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=88.30 E-value=8.2 Score=33.87 Aligned_cols=165 Identities=11% Similarity=-0.003 Sum_probs=80.8
Q ss_pred ceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHH
Q 016036 165 GIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGM 244 (396)
Q Consensus 165 ~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~ 244 (396)
.+.++.|-..|. +.....+++-.+.+..|..+. .+ |.. .-.+...+.+..+.+|++.+|+|.++.++.|..
T Consensus 34 ~~eiIvvDd~S~---d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~ 104 (240)
T 3bcv_A 34 DIEIILIDDESP---DNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104 (240)
T ss_dssp SEEEEEEECCCS---SSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred CeEEEEEECCCC---cCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence 456776665554 233445555555676766554 22 322 122344444445789999999999999887777
Q ss_pred HHHhcCC-CCceEEEEee----cCc----ccccC-CCccccCccc------ccCCCCCCc---C-CCcCCCceeeCHHHH
Q 016036 245 TLAAHRT-KPRVYVGCMK----SGP----VLARK-GVKYYEPEYW------KFGEIGNKY---F-RHATGQLYALSKDLA 304 (396)
Q Consensus 245 ~L~~~~~-~~~lY~G~~~----~~p----v~r~~-~~K~~~p~~~------~f~d~~~~Y---P-~y~~G~gYvlS~dla 304 (396)
++..... ...+.+|... .+. +...+ ...++..... .++ ....+ + ...+|++.++.++++
T Consensus 105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rr~~~ 183 (240)
T 3bcv_A 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIA-SDPYAREERAIQVSAKVVLYRRNLI 183 (240)
T ss_dssp HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTS-SCHHHHHHHHHHHTCSCEEEEHHHH
T ss_pred HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhh-cchhhccccccccchhheeeeHHHH
Confidence 7665432 3344433321 111 11000 0011111000 000 00000 0 014578889999999
Q ss_pred HHHHHhccccCCCCchhHHHHHHHhcC--CCeEecCC
Q 016036 305 TYISINQHLLHKYANEDVSLGSWFIGL--DVEHVDDR 339 (396)
Q Consensus 305 ~~I~~~~~~l~~~~~EDV~vG~~l~~L--~v~~i~~~ 339 (396)
+.+-.....-..+..||+.+..-+... .+..+++.
T Consensus 184 ~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 184 EKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 885311111112346999998766444 45555554
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=86.83 E-value=17 Score=38.42 Aligned_cols=125 Identities=17% Similarity=0.122 Sum_probs=68.9
Q ss_pred HHHHHHHhcCCceEEEEeccceeEeHHHHHHHHHhcC--CCCceEEEEee--cCc--------ccccCCCccc-cCcccc
Q 016036 214 TYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHR--TKPRVYVGCMK--SGP--------VLARKGVKYY-EPEYWK 280 (396)
Q Consensus 214 ~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L~~~~--~~~~lY~G~~~--~~p--------v~r~~~~K~~-~p~~~~ 280 (396)
.+++.|....+++|++..|||+.+..+.|..++.... +...+..|.+. ..+ .+......|. .|...+
T Consensus 258 ~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 337 (657)
T 4fix_A 258 RVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEY 337 (657)
T ss_dssp HHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCS
T ss_pred HHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccc
Confidence 3566665434789999999999999888877776543 22333333442 111 1100000000 000000
Q ss_pred ---cCC-------------CCCCcCCCcCCCceeeCHHHHHHHHHhccccCCCCchhHHHHHHHhcCC--CeEecCCC
Q 016036 281 ---FGE-------------IGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLD--VEHVDDRR 340 (396)
Q Consensus 281 ---f~d-------------~~~~YP~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~i~~~~ 340 (396)
|+. .......|++|.+.++.+++++.+---.. -.+..||+-++.=+...| +..+++..
T Consensus 338 ~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~ 413 (657)
T 4fix_A 338 DHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAA 413 (657)
T ss_dssp CEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEE
Confidence 000 11223458899999999999998743222 123469999987775444 44444433
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=81.33 E-value=38 Score=34.73 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=65.4
Q ss_pred HHHHHhcCCceEEEEeccceeEeHHHHHHHHHhcCCCC-ceEEEEee---cCc--cc---ccC-----------------
Q 016036 216 FATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKP-RVYVGCMK---SGP--VL---ARK----------------- 269 (396)
Q Consensus 216 ~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L~~~~~~~-~lY~G~~~---~~p--v~---r~~----------------- 269 (396)
+..+....+.+|++..|+|..+..+.|..++......+ ...+|... ... .. ...
T Consensus 166 ~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 166 RNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 34444445889999999999999888877776653222 23334321 111 00 000
Q ss_pred ------CCccccCccc---ccCCCCCCcCCCcCCCceeeCHHHHHHHHHhccccCCCCchhHHHHHHHhcCC--CeEecC
Q 016036 270 ------GVKYYEPEYW---KFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLD--VEHVDD 338 (396)
Q Consensus 270 ------~~K~~~p~~~---~f~d~~~~YP~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~i~~ 338 (396)
...|...... .+. .......++.|++.+++++++..+---...+..+..||.-++.=+...| +..+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 324 (625)
T 2z86_A 246 KVEQNKSVDWRIEHFKNTDNLR-LCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEG 324 (625)
T ss_dssp ------CCCTHHHHHHHTTTTT-TCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGG
T ss_pred hhccCCccccchhhhccccccc-ccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEccc
Confidence 0001000000 000 0111123578999999999999874333344444579999987775444 444443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=72.44 E-value=43 Score=34.30 Aligned_cols=156 Identities=10% Similarity=0.053 Sum_probs=79.4
Q ss_pred ceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHH
Q 016036 165 GIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGM 244 (396)
Q Consensus 165 ~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~ 244 (396)
.+.++.|-..|. ++ ....+.+-.+.+..+..+. .+ |.. .-.++..+....+.+|++..|+|.++.++.|..
T Consensus 404 ~~eiivvdd~S~--d~-t~~~~~~~~~~~~~i~~~~-~~---n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~ 474 (625)
T 2z86_A 404 DLEVCICDDGST--DD-TLRILQEHYANHPRVRFIS-QK---NKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVEL 474 (625)
T ss_dssp SEEEEEEEESCS--SS-HHHHHHHHHTTCTTEEEEE-EC---CCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHH
T ss_pred CeEEEEEECcCC--hh-HHHHHHHHHhhCCcEEEEe-CC---CCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHHH
Confidence 456777766554 23 3334444444555665553 22 221 122344444445789999999999999888887
Q ss_pred HHHhcC--CCCceEEEEee----cCcccccCCCccccCcccccCCCCCCcCCCcCCCceeeCHHHHHHHHHhccccCCCC
Q 016036 245 TLAAHR--TKPRVYVGCMK----SGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYA 318 (396)
Q Consensus 245 ~L~~~~--~~~~lY~G~~~----~~pv~r~~~~K~~~p~~~~f~d~~~~YP~y~~G~gYvlS~dla~~I~~~~~~l~~~~ 318 (396)
.+.... +.-.+..|... .+...... +..+.. . +......++.|.+.++.+++...+---...+ ..
T Consensus 475 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~~-~---~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~~--~~ 545 (625)
T 2z86_A 475 CLDEFRKDLSLACVYTTNRNIDREGNLISNG---YNWPIY-S---REKLTSAMICHHFRMFTARAWNLTEGFNESI--SN 545 (625)
T ss_dssp HHHHHHHCTTCSEEEEEEEEECTTSCEEEEC---CCCSSC-C---HHHHTTSCCCCSCEEEEHHHHTTTTCCCSSC--SS
T ss_pred HHHHHHhCCCeeEEEeeeEEECCCCCEeccC---cccccC-C---HHHHhhcccCCceEEEEHHHHHHhCCCCCcc--CC
Confidence 775542 22223223221 12221110 111110 0 0011223456788899988765543222222 24
Q ss_pred chhHHHHHHHhcCC-CeEecC
Q 016036 319 NEDVSLGSWFIGLD-VEHVDD 338 (396)
Q Consensus 319 ~EDV~vG~~l~~L~-v~~i~~ 338 (396)
.||.-+..-+...| +.+++.
T Consensus 546 ~eD~dl~~r~~~~g~~~~~~~ 566 (625)
T 2z86_A 546 AVDYDMYLKLSEVGPFKHINK 566 (625)
T ss_dssp CHHHHHHHHHTTTSCEEEEEE
T ss_pred hHHHHHHHHHHHhCCEEEeCC
Confidence 69998877665444 444443
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=70.33 E-value=68 Score=34.55 Aligned_cols=131 Identities=13% Similarity=-0.015 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhcCCceEEEEeccceeEeHHHHHHHHHhcC--CCCceEEEEee--c-CcccccCCCccccC-cccc-cC
Q 016036 210 AKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHR--TKPRVYVGCMK--S-GPVLARKGVKYYEP-EYWK-FG 282 (396)
Q Consensus 210 ~Ktl~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~~~L~~~~--~~~~lY~G~~~--~-~pv~r~~~~K~~~p-~~~~-f~ 282 (396)
.|.- .+..+.+..+.+|++.+|+|+.+..+.|...+.... ++-.+..|... + .+..+....-...+ +... +.
T Consensus 225 GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (802)
T 4hg6_A 225 AKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYG 303 (802)
T ss_dssp HHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHH
T ss_pred cchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHH
Confidence 3443 355655555889999999999999988888776652 22223323221 1 11110000000000 0000 00
Q ss_pred C--C--CCCcCCCcCCCceeeCHHHHHHHHHhccccCCCCchhHHHHHHHhcCC--CeEecCCCcccC
Q 016036 283 E--I--GNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLD--VEHVDDRRLCCG 344 (396)
Q Consensus 283 d--~--~~~YP~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~i~~~~f~~~ 344 (396)
. . ...-.+++.|++.++.+++++.+---. .....||..++.-+...| +..+++....+.
T Consensus 304 ~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 304 KIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp THHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred HHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 0 0 000113467999999999999873211 122359999998886554 455665554443
No 11
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=30.94 E-value=1.1e+02 Score=29.69 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=47.7
Q ss_pred HHHHHHHhcCCceEEEEeccceeEeHHHHH---HHHHhcCCCCceEEEEeec--CcccccCCCccccCcccccCCCCCCc
Q 016036 214 TYFATAVSMWDAEFYIKVDDDVHVNLATLG---MTLAAHRTKPRVYVGCMKS--GPVLARKGVKYYEPEYWKFGEIGNKY 288 (396)
Q Consensus 214 ~~~~wa~~~~~a~f~lKvDDDvfVnv~~L~---~~L~~~~~~~~lY~G~~~~--~pv~r~~~~K~~~p~~~~f~d~~~~Y 288 (396)
.++.++....++++++-+|||..+.++-+. +.|......++++ |+.+ .+...... .-..+...|+
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n~~g~~~~~-~~~~~~~lyr------- 158 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWNDNGKEQMV-DSSKPELLYR------- 158 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCCTTCBGGGS-CTTCTTCEEE-------
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEecccCccccccc-cccCcceEEe-------
Confidence 455555554479999999999999986663 3333333445665 2321 11100000 0011222222
Q ss_pred CCCcCCCceeeCHHHHHHHHH
Q 016036 289 FRHATGQLYALSKDLATYISI 309 (396)
Q Consensus 289 P~y~~G~gYvlS~dla~~I~~ 309 (396)
-.|..|-|+++++++-+.+-.
T Consensus 159 s~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 159 TDFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHGG
T ss_pred ecCCCchhhhhcHHHHHHHhh
Confidence 224568899999999886643
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=29.93 E-value=2.3e+02 Score=27.86 Aligned_cols=163 Identities=9% Similarity=0.004 Sum_probs=84.3
Q ss_pred ceEEEEEeccCCCCCcchH--HHHHHHHh-HcCC-EEEecccc-c--CCchhHHHHHHHHHHHhcCCceEEEEeccce-e
Q 016036 165 GIIIRFVIGHSATSGGILD--KAIDAEEK-MHGD-FLRLEHIE-G--YLELSAKTKTYFATAVSMWDAEFYIKVDDDV-H 236 (396)
Q Consensus 165 ~i~v~FvlG~s~~~~~~~~--~~I~~E~~-~~~D-Il~ldf~D-s--Y~nLt~Ktl~~~~wa~~~~~a~f~lKvDDDv-f 236 (396)
...+++|-+-|+ |.+.+ +.+..+.. .++. ++...... . -.....=...+|+||....+.++++-+|-|. .
T Consensus 28 ~~EIIVVDDGSt--D~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~ 105 (397)
T 2bo4_A 28 RVHEVLCIGYER--DQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITS 105 (397)
T ss_dssp TCCEEEEEESSC--CHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSS
T ss_pred CeEEEEEECcCC--ccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Confidence 346888888776 33322 12222333 3444 33332220 1 1234455677888887334789999999999 4
Q ss_pred EeHHHHHHHHHhcCCCCceEEEEeec---CcccccCCCcc----ccCcccccCCCCCCcCCCcCCCceeeCHHHHHHHHH
Q 016036 237 VNLATLGMTLAAHRTKPRVYVGCMKS---GPVLARKGVKY----YEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISI 309 (396)
Q Consensus 237 Vnv~~L~~~L~~~~~~~~lY~G~~~~---~pv~r~~~~K~----~~p~~~~f~d~~~~YP~y~~G~gYvlS~dla~~I~~ 309 (396)
.+++.+..++....+.-.+.+|.... +........+. +.+.. .........++.+++++++++.+..
T Consensus 106 ~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~------~~~~i~dp~sG~~a~~R~vl~~l~~ 179 (397)
T 2bo4_A 106 FGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHT------ELSWIEQPLGGELLMRREVAAMLYE 179 (397)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTS------SGGGCSCTTCCCEEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHh------hccccccCCcccEEEeHHHHHHHhh
Confidence 78877777776543333566675321 11111111111 11110 0012223356778999999998854
Q ss_pred hc--cccCCCCchhHHHHHHH--hcCCCeEe
Q 016036 310 NQ--HLLHKYANEDVSLGSWF--IGLDVEHV 336 (396)
Q Consensus 310 ~~--~~l~~~~~EDV~vG~~l--~~L~v~~i 336 (396)
.. .....|. .|+.+-..+ .++.|..+
T Consensus 180 ~~~~~~~~~fg-~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 180 DERVRRRSDWG-IDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp CHHHHTCCSTT-HHHHHHHHHHHTTCCEEEE
T ss_pred hcccCcCCCcc-hHHHHHHHHHHcCCEEEEE
Confidence 21 1233343 466665544 35555433
No 13
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=27.61 E-value=76 Score=24.75 Aligned_cols=73 Identities=25% Similarity=0.248 Sum_probs=43.3
Q ss_pred EeCCCCCHHHHHHHHHHhccCcccchhhhccCceEEEEEeccCCCCCcchHHHHHHHHhHcCCEEEecccccCCchhHHH
Q 016036 133 INTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKT 212 (396)
Q Consensus 133 V~S~p~~~~rR~aIR~TW~~~~~~~~~l~~~~~i~v~FvlG~s~~~~~~~~~~I~~E~~~~~DIl~ldf~DsY~nLt~Kt 212 (396)
|.|+.++.+-|+.|..-=- ...-.++||-|.+.+. -...+.|+++-|=-.-.=-.-..++||..+
T Consensus 31 irtatssqdirdiiksmkd-----------ngkplvvfvngasqnd----vnefqneakkegvsydvlkstdpeeltqrv 95 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKD-----------NGKPLVVFVNGASQND----VNEFQNEAKKEGVSYDVLKSTDPEELTQRV 95 (112)
T ss_dssp EEEECSHHHHHHHHHHHTT-----------CCSCEEEEECSCCHHH----HHHHHHHHHHHTCEEEEEECCCHHHHHHHH
T ss_pred eeeccchhhHHHHHHHHHh-----------cCCeEEEEecCccccc----HHHHHHHHHhcCcchhhhccCCHHHHHHHH
Confidence 5566677788887754321 2233578999988642 233455655544221111122345799999
Q ss_pred HHHHHHHH
Q 016036 213 KTYFATAV 220 (396)
Q Consensus 213 l~~~~wa~ 220 (396)
..+++.|-
T Consensus 96 reflktag 103 (112)
T 2lnd_A 96 REFLKTAG 103 (112)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcc
Confidence 99998875
No 14
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=23.19 E-value=63 Score=22.05 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=19.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 016036 70 NNTEKLAMVEQAIQSQDKRLDGLKTKITAVRA 101 (396)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~le~el~~~~~ 101 (396)
+++.++...+ .+++++|..||.+|.+-..
T Consensus 9 dlvsel~~r~---e~LE~Ri~~LE~KLd~L~~ 37 (43)
T 2pnv_A 9 DMISDLNERS---EDFEKRIVTLETKLETLIG 37 (43)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh---HHHHHHHHHHHHHHHHHHH
Confidence 4544444444 4789999999998876654
No 15
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=22.91 E-value=71 Score=19.95 Aligned_cols=28 Identities=29% Similarity=0.469 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 016036 74 KLAMVEQAIQSQDKRLDGLKTKITAVRA 101 (396)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~le~el~~~~~ 101 (396)
++..-.+-|-.|.|.|..|.-|+|+.++
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444445677888999999999988764
No 16
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=22.15 E-value=52 Score=20.62 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=20.1
Q ss_pred CchhHHHHHHHHHHhhHhhhccc
Q 016036 16 IPRKWALFLCACSFCAGMSFTNR 38 (396)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~ 38 (396)
++--|+.++.+|+|-..+.|=||
T Consensus 4 vsl~WaalmvvftfSlslVVWGR 26 (29)
T 1vf5_H 4 DVLGWVALLVVFTWSIAMVVWGR 26 (29)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhheeeeEEEEec
Confidence 56679999999999999988776
No 17
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=21.66 E-value=1.1e+02 Score=19.17 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhh
Q 016036 74 KLAMVEQAIQSQDKRLDGLKTKIT 97 (396)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~le~el~ 97 (396)
+|.+-.-.+|+|+++++.||.-..
T Consensus 7 ~~r~l~~ivq~lq~r~drle~tvq 30 (32)
T 2akf_A 7 DVRNLNAIVQKLQERLDRLEETVQ 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 454444478999999999987554
No 18
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=21.52 E-value=4.5e+02 Score=23.67 Aligned_cols=132 Identities=11% Similarity=-0.008 Sum_probs=72.9
Q ss_pred HHHHHHhHcCCEEEecccccCCchhH-HHHHHHHHHHhcCCceEEEEeccc---eeEeHHHHHHHHHhcCCCCceEEEEe
Q 016036 185 AIDAEEKMHGDFLRLEHIEGYLELSA-KTKTYFATAVSMWDAEFYIKVDDD---VHVNLATLGMTLAAHRTKPRVYVGCM 260 (396)
Q Consensus 185 ~I~~E~~~~~DIl~ldf~DsY~nLt~-Ktl~~~~wa~~~~~a~f~lKvDDD---vfVnv~~L~~~L~~~~~~~~lY~G~~ 260 (396)
.|..+..+.|==+++.+.++. .+. +-.+.=.|+ +..++++++.+|.| +-.+++.+..+|+. ..++.+|..
T Consensus 16 ~l~~~l~~~gi~~~l~~~~Sl--I~raRN~lv~~Fl-~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsY 89 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSRRNH--VAVQREIALDMFL-EMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYY 89 (203)
T ss_dssp HHHHHHHHTTCCEEEECCCSC--HHHHHHHHHHHHH-HCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEEC
T ss_pred HHHHHHHhCCCeEEEEccccc--hHHHHHHHHHHHH-hcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEe
Confidence 455555555444556655332 222 222222233 35689999999999 99999999999965 246888874
Q ss_pred --ecCcccccCCCccccCcccccCCCCCCcCCCcCCCceeeCHHHHHHHHHhcc------ccCCCCchhHHHHHHHh
Q 016036 261 --KSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQH------LLHKYANEDVSLGSWFI 329 (396)
Q Consensus 261 --~~~pv~r~~~~K~~~p~~~~f~d~~~~YP~y~~G~gYvlS~dla~~I~~~~~------~l~~~~~EDV~vG~~l~ 329 (396)
++..-. ....+.|.-. +. ..=-.||+.|.-++++.+.+.|....- ..+..--|||++=.-+.
T Consensus 90 p~K~~~~~-s~~a~~y~~~---i~---~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k 159 (203)
T 2c0n_A 90 YLKTLRGY-SVYRKDWEKE---IF---DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHK 159 (203)
T ss_dssp BCTTSSSB-SEESSSBCSS---CC---CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHC
T ss_pred eccCCCcc-chHHHHHHHh---cc---CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccc
Confidence 221100 0001111111 10 011246888889999999998855321 12223348988855543
No 19
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=20.86 E-value=90 Score=21.99 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh
Q 016036 79 EQAIQSQDKRLDGLKTKITAVRA 101 (396)
Q Consensus 79 ~~~~~~~~~~~~~le~el~~~~~ 101 (396)
-..++.|+|+|+.||.+|..++.
T Consensus 11 ERsV~KLek~ID~LEdeL~~eKe 33 (52)
T 2z5i_A 11 ENEVARLKKLVDDLEDELYAQKL 33 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHH
Confidence 34677899999999999988774
Done!