BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016038
         (396 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q97ZN1|SYR_SULSO Arginine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092
           / DSM 1617 / JCM 11322 / P2) GN=argS PE=3 SV=1
          Length = 625

 Score = 36.6 bits (83), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 7/134 (5%)

Query: 123 LELVQSSGNNQICYDHIAFRTFGVNGHGIDSIASFFMDYGYTKQDELRFPAKKLKAFWFS 182
           L L++S G        IA+  F  N    D + +   +  Y  Q +LR   + L    F+
Sbjct: 358 LVLMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQYIPQIQLRGALELLGYSRFA 417

Query: 183 PPSFHYPDGGSGVNGPLPRVFISELL-VDQMSPQIQEIIR-KYTETSGSGKK-----HAA 235
               HY  G   + G      + +++ +D++  ++  I+R K  E  G+ +      +AA
Sbjct: 418 ENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDIANAA 477

Query: 236 LASALGSLTWGKPL 249
           L  A+ S++  KPL
Sbjct: 478 LRYAILSVSANKPL 491


>sp|Q02763|TIE2_HUMAN Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=1 SV=2
          Length = 1124

 Score = 33.9 bits (76), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 204 ISELLVDQMSPQIQEIIRKYTETSGSGKKHAAL-ASALGSLTWGKPLYSEFQQLARESEY 262
           ++ +L++ + P+ Q ++R    T   G+    L A  L  +   +P   +   +   S  
Sbjct: 597 LTSVLLNNLHPREQYVVRARVNTKAQGEWSEDLTAWTLSDILPPQPENIKISNITHSSAV 656

Query: 263 AAWTLVNGYAVNHVTI 278
            +WT+++GY+++ +TI
Sbjct: 657 ISWTILDGYSISSITI 672


>sp|Q5FQL0|KUP_GLUOX Probable potassium transport system protein kup OS=Gluconobacter
           oxydans (strain 621H) GN=kup PE=3 SV=1
          Length = 675

 Score = 33.5 bits (75), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 74  KRNLSVVSASKSDDRDPSSSFQGGESFFRTVLQSMEAVYLNRNPTAKAVLELVQSSGNNQ 133
           KR  S+++A +  D  P  SF       RT+     AV+L  NP       L+ +  +N+
Sbjct: 494 KRGRSLIAARQQADSMPMGSFLARLPQSRTIRVPGLAVFLTANPDIVPN-SLLHNLKHNK 552

Query: 134 ICYDHIAFRT 143
           + +DHI F T
Sbjct: 553 VLHDHILFVT 562


>sp|Q50783|MVHA_METTH F420-non-reducing hydrogenase subunit A OS=Methanothermobacter
           thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
           10044 / NBRC 100330 / Delta H) GN=mvhA PE=3 SV=2
          Length = 472

 Score = 33.1 bits (74), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 51/216 (23%)

Query: 51  KSRNFISLKPSAPFHGNSSVPLQKRNLSVVSASKSDDRDPSSSFQGG----------ESF 100
           K+RN   +   AP     ++ L+K  L +V A+      P+SS  GG          +  
Sbjct: 126 KTRNVFQIIKDAPDIALQAIELRKNALELVRATGGRPIHPTSSTPGGISTELDDETQKDL 185

Query: 101 FRTVLQSM---EAVYLNRNPTAKAVLELVQSSGNNQI------------CYDHIA----- 140
            +   +++   EA      P  +  ++LV S GN +              YD I      
Sbjct: 186 LKKAQRNVELAEATLELAVPIFEENIDLVNSLGNIETYHTGLVKDGVWDVYDGIVRIKDK 245

Query: 141 ----FRTFGVNGHGIDSIASFFMDYGYTKQDELRFPAKKLKAFWFSPPSFHYPDGGSGVN 196
               FR F    +  D+IA     Y +     L+FP  K            YPDG   V+
Sbjct: 246 EGNMFREFKPADYA-DTIAEHVKPYSW-----LKFPYIK---------DLGYPDGVYRVS 290

Query: 197 GPLPRVFISELLVDQMSPQIQEIIRKYTETSGSGKK 232
            PL R+ +++ + D  +P+ QE  +++ E  G  ++
Sbjct: 291 -PLSRLNVADKMPDA-APKAQEHFKEFRENFGYAQQ 324


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.130    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,680,374
Number of Sequences: 539616
Number of extensions: 6073382
Number of successful extensions: 26464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 23406
Number of HSP's gapped (non-prelim): 1667
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)