Query 016039
Match_columns 396
No_of_seqs 244 out of 858
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w27_A Phenylalanine ammonia-l 100.0 1E-116 5E-121 934.1 38.9 396 1-396 319-714 (714)
2 2yii_A Phenylalanine ammonia-l 100.0 2E-112 7E-117 901.5 33.6 386 1-395 310-701 (705)
3 1y2m_A Phenylalanine ammonia-l 100.0 1E-102 4E-107 828.9 31.3 367 1-386 332-716 (716)
4 3unv_A ADMH; MIO, lyase; HET: 100.0 2.1E-72 7.1E-77 584.3 23.2 247 1-255 279-534 (547)
5 2nyn_A Phenylalanine/histidine 100.0 3.3E-71 1.1E-75 577.1 23.7 253 1-254 282-548 (565)
6 1gkm_A Histidase, HAL, histidi 100.0 2.3E-71 7.8E-76 573.9 20.4 238 1-255 254-492 (507)
7 2qve_A Tyrosine aminomutase; M 100.0 9.5E-71 3.2E-75 571.4 24.3 244 1-254 254-509 (526)
8 2o6y_A Putative histidine ammo 100.0 7.5E-71 2.6E-75 571.7 23.3 245 1-254 262-516 (521)
9 1gkm_A Histidase, HAL, histidi 21.4 1.7E+02 0.006 30.0 7.1 74 297-379 423-497 (507)
10 2qve_A Tyrosine aminomutase; M 17.3 1.8E+02 0.0062 30.0 6.1 46 334-383 474-519 (526)
No 1
>1w27_A Phenylalanine ammonia-lyase 1; phenylpropanoid metabolism, MIO; HET: MDO; 1.7A {Petroselinum crispum} SCOP: a.127.1.2
Probab=100.00 E-value=1.5e-116 Score=934.12 Aligned_cols=396 Identities=83% Similarity=1.307 Sum_probs=382.1
Q ss_pred ChhhhcCCccchhhhhcccCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCccccCCCC
Q 016039 1 MEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNF 80 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~~~~~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~~~v~~ggNF 80 (396)
||++|+||++++...+.+..|+..+++||||||||+||||||++|+|++++++|++||||++|||+|++++|+++|||||
T Consensus 319 ir~lL~gS~l~~~~~~~~~~~~~~~rvQD~YSlRc~PQV~Ga~~d~l~~a~~~le~ElNS~tDNPlI~~~~g~v~sGGNF 398 (714)
T 1w27_A 319 MEHILDGSAYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKMIEREINSVNDNPLIDVSRNKAIHGGNF 398 (714)
T ss_dssp HHHHHHTCSSCCCCCSSCSSCCCCSSSCCCHHHHTHHHHHHHHHHHHHHHHHHHHHHTTSCCCSSEEETTTTEEECCCTT
T ss_pred HHHHhCccchhhhcccccccCcccCcCcCcceecchhhhhHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCceeeCCCc
Confidence 68999999999887544555666689999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhhcCCCCccc
Q 016039 81 QGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHV 160 (396)
Q Consensus 81 ~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~La~P~s~~~ 160 (396)
||+||++|||++++|++++|++++||+.+|+||.+|+|||+||+++++||+|||||++||++|||++|||+||+|+|+|+
T Consensus 399 hg~pvA~AmD~L~iAla~lg~lserR~~~Lvdp~~~~GLP~fL~~~~~~glnsGfmi~Q~taAal~sEnk~LA~PaSvds 478 (714)
T 1w27_A 399 QGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHV 478 (714)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTSTTCCGGGCCSSCGGGCCTTHHHHHHHHHHHHHHHHHTSCSTTCC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCChhhcCCCCCCcccchHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 99999999999999999999999999999999999889999999766899999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCc
Q 016039 161 QSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKNTISQVAKKVLTMGVNGELHPSR 240 (396)
Q Consensus 161 ~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~dR 240 (396)
+|+++|||||||||++||||+.+++||+++|+|||||++|||+|||+++.+++++++++++++++++++++.++.+.+.|
T Consensus 479 ~pts~~qEDhvSmg~~aArk~~~~venl~~vlAiELl~a~QAiDlR~~~~~~~~~~~~~~~~~r~~v~~~~~~~~~~~~~ 558 (714)
T 1w27_A 479 QSAEQHNQDVNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSR 558 (714)
T ss_dssp CCBTTTTBSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCBTTTBCCSSCH
T ss_pred ccccCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHhccCCCccccccc
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred cCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHHHHHHhcccccccCcchhHhhhHHHHHHHHHhhcHHHHHHHHHH
Q 016039 241 FCEKDLLKVVDREYVFSYADDPCSATYPLMRKLRQVLVDHALTNNEDLKNANASIFLKIGAFEEELKTLLPKEVESARSA 320 (396)
Q Consensus 241 ~~~~dl~~~~~~~~~~~~~~d~~~~~~~l~~~l~~vl~~~~l~~~~~~~~~~~~~~~~i~~fe~el~~~L~~~~~~~R~a 320 (396)
++++++.+++++.++|.|++|||+.+||+|+|++++||+|++++++.+++..+++|++|+.|+++++.+|+++|+++|++
T Consensus 559 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~r~~ 638 (714)
T 1w27_A 559 FCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAA 638 (714)
T ss_dssp HHHHHHHHHHHHSCGGGTTTSTTCTTSHHHHHHHHHHHHHHHTSGGGGGSGGGCSGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHhhhHHHHhhcCcccccchHHHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988766766677889999999999999999999999999
Q ss_pred hhcCCCCCccccccCCcchhHHHHHhhhCccccccccccCCCccHHHHHHHHhcCcchhhHHHhhccccCCCCCCC
Q 016039 321 FESGNLEIPNRIKECRSYPLYRFVREELGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLPIC 396 (396)
Q Consensus 321 f~~g~~~~~~~i~~~~S~pLY~FVR~eLgvp~~~G~~~~T~G~~is~IyeAIr~G~l~d~ll~cl~~~~~~p~~~~ 396 (396)
|++|++++|++|++|||||||+|||+|||||||+|++++|||+||||||+|||+|+|++|||+||++|+|+|+|||
T Consensus 639 f~~g~~~~~~~i~~~~s~~lY~fVR~~Lg~~~~~g~~~~~~g~~~~~i~~ai~~g~~~~~l~~~~~~~~~~~~~~~ 714 (714)
T 1w27_A 639 LESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGAPLPIC 714 (714)
T ss_dssp HHTTCCSSCCGGGGSTTHHHHHHHHTTSCCCCCCTTSSCCHHHHHHHHHHHHHTTTTHHHHHHTTTTCCSSCCCCC
T ss_pred HhcCCcCccchhhcCCchhHHHHHHHHcCCCcccCCCCCCCchhHHHHHHHHHCCccHHHHHHHHhhhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>2yii_A Phenylalanine ammonia-lyase; HET: MDO; 2.18A {Taxus wallichiana var} PDB: 3nz4_A*
Probab=100.00 E-value=2e-112 Score=901.54 Aligned_cols=386 Identities=48% Similarity=0.794 Sum_probs=350.1
Q ss_pred ChhhhcCCccchhhhhcccCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCccccCCCC
Q 016039 1 MEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNF 80 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~~~~~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~~~v~~ggNF 80 (396)
||++|+||++++...+.+..++..+++||||||||+||||||++|+|++++++|++||||++|||+|++++|+++|||||
T Consensus 310 ir~lL~gS~l~~~~~~~~~~~~~~~rvQDpYSlRc~PQV~Ga~~d~l~~a~~~le~ElNS~tDNPlI~~~~g~v~sGGNF 389 (705)
T 2yii_A 310 LEWLLRSSPFQELSREYYSIDKLKKPKQDRYALRSSPQWLAPLVQTIRDATTTVETEVNSANDNPIIDHANDRALHGANF 389 (705)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTGGGSCSSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSEEEGGGTEEECCCTT
T ss_pred HHHHhCcCcchhhhhhccccccccCcCcCCceeechhhhhHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCccccCCCc
Confidence 68999999998876543344555679999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhhcCCCCccc
Q 016039 81 QGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNHV 160 (396)
Q Consensus 81 ~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~La~P~s~~~ 160 (396)
||+||++|||++++|++++|++++||+.+|+||.+|+|||+||+++++||+|+|||++||++|||++|||+||+|+|+|+
T Consensus 390 hg~pvalamD~L~iAla~lg~lserR~~~Lvdp~~n~GLP~fL~~~~~~GlnsGfmi~Q~taAal~sEnk~LA~PaSvds 469 (705)
T 2yii_A 390 QGSAVGFYMDYVRIAVAGLGKLLFAQFTELMIEYYSNGLPGNLSLGPDLSVDYGLKGLDIAMAAYSSELQYLANPVTTHV 469 (705)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCGGGCCCSSGGGCCTTHHHHHHHHHHHHHHHHHTSCSGGGC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCChhhcCCCCCCcccchHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 99999999999999999999999999999999999889999999656899999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCc
Q 016039 161 QSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKNTISQVAKKVLTMGVNGELHPSR 240 (396)
Q Consensus 161 ~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~dR 240 (396)
+|+++|||||||||++||||+.++++|+++|+|||||++|||+|||+++.+++..++++++++++++ + +.++
T Consensus 470 ~pts~~qED~vSmg~~aArk~~~~venl~~vlAiELl~a~QAidlR~~~~~~~~~~~~~~~~~~~~~------~-l~~~- 541 (705)
T 2yii_A 470 HSAEQHNQDINSLALISARKTEEALDILKLMIASHLTAMCQAVDLRQLEEALVKVVENVVSTLADEC------G-LPND- 541 (705)
T ss_dssp CCBTTTTBSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------T-CCHH-
T ss_pred cccccCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHh------C-CChh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999876 1 5555
Q ss_pred cCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHHHHHHhcccccccCcchhHhhhHHHHHHHHHhhcHHHHHHHHHH
Q 016039 241 FCEKDLLKVVDREYVFSYADDPCSATYPLMRKLRQVLVDHALTNNEDLKNANASIFLKIGAFEEELKTLLPKEVESARSA 320 (396)
Q Consensus 241 ~~~~dl~~~~~~~~~~~~~~d~~~~~~~l~~~l~~vl~~~~l~~~~~~~~~~~~~~~~i~~fe~el~~~L~~~~~~~R~a 320 (396)
+++|+.+++++.++|+|+||||+.+||+|+|++++|+||++++++.++...+++|.+|+.|+++++.+|+++|+++|++
T Consensus 542 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~r~~ 620 (705)
T 2yii_A 542 -TKARLLYVAKAVPVYTYLESPCDPTLPLLLGLKQSCFDTILALHKKDGIETDTLVDRLAEFEKRLSDRLENEMTAVRVL 620 (705)
T ss_dssp -HHHHHHHHHHHSCGGGTTTCTTCTTSHHHHHHHHHHHHHHHHTTC------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhhhHHHHHhhccccccccHHHHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999988766666677889999999999999999999999999
Q ss_pred hh-cCCCCCcc-----ccccCCcchhHHHHHhhhCccccccccccCCCccHHHHHHHHhcCcchhhHHHhhccccCCCCC
Q 016039 321 FE-SGNLEIPN-----RIKECRSYPLYRFVREELGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLECLKEWDGSPLP 394 (396)
Q Consensus 321 f~-~g~~~~~~-----~i~~~~S~pLY~FVR~eLgvp~~~G~~~~T~G~~is~IyeAIr~G~l~d~ll~cl~~~~~~p~~ 394 (396)
|+ +|++++|| ||++|||||||+|||+|||||||+|++++|||+||||||+|||+|++++|||+||++|+|+|+|
T Consensus 621 ~~~~~~~~~~n~~~~~ri~~~~S~~lY~FVR~eLG~p~l~G~~~~~~g~~~~~v~~ai~~g~~~~~l~~~~~~~~~~~~~ 700 (705)
T 2yii_A 621 YEKKGHKTADNNDALVRIQGSKFLPFYRFVREELDTGVMSARREQTPQEDVQKVFDAIADGRITVPLLHCLQGFLGQPNG 700 (705)
T ss_dssp HHC------------CGGGGSTTHHHHHHHHTTTTCCCCSTTCCSCHHHHHHHHHHHHHTTTTHHHHHHHTTTCC-----
T ss_pred HHhcCCCCCCccchhhhhhccCchhHHHHHHHHcCCCccCCCCCCCCCccHHHHHHHHHCCccHHHHHHHHHhhcCCCcc
Confidence 99 89889999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 016039 395 I 395 (396)
Q Consensus 395 ~ 395 (396)
|
T Consensus 701 ~ 701 (705)
T 2yii_A 701 C 701 (705)
T ss_dssp -
T ss_pred c
Confidence 8
No 3
>1y2m_A Phenylalanine ammonia-lyase; alpha helices; HET: MSE; 1.60A {Rhodosporidium toruloides} PDB: 1t6j_A* 1t6p_A*
Probab=100.00 E-value=1.3e-102 Score=828.88 Aligned_cols=367 Identities=35% Similarity=0.524 Sum_probs=336.4
Q ss_pred ChhhhcCCccchhhhhcccCC-CCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHh-hcCCCCCeeecCCCccccCC
Q 016039 1 MEHILDGSSYVEAAQKFHEID-PLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREI-NSVNDNPLIDVSRNKALHGG 78 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~~~~~~~-~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~Ei-NS~~DNPli~~~~~~v~~gg 78 (396)
||++|+||++++...+.+..| +..+++||||||||+||||||++|+|++++++|++|| ||++|||+|++++|+++|||
T Consensus 332 ir~lL~gS~l~~~~~~~~~~~~~~~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~le~El~NS~tDNPlI~~~~g~v~sGG 411 (716)
T 1y2m_A 332 IRKLLEGSRFAVHHEEEVKVKDDEGILRQDRYPLRTSPQWLGPLVSDLIHAHAVLTIEAGQSTTDNPLIDVENKTSHHGG 411 (716)
T ss_dssp HHHHHTTCSSSBCHHHHC----CCCCCCSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSEEETTTTEEECCC
T ss_pred HHHHhccCcchhhhhhhcccccccCCcCcCccchhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCeeeCCCCeeecCC
Confidence 689999999998865334444 2367999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhhcCCCCc
Q 016039 79 NFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTN 158 (396)
Q Consensus 79 NF~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~La~P~s~ 158 (396)
||||+||++|||++++|++++|++++||+.+|+||.+|+|||+||++ ++||+|||||++||++|||++|||+||+|+|+
T Consensus 412 NFhg~~va~amD~l~iAla~lg~lserR~~~Lvnp~~~~GLP~fL~~-~~~glnsG~m~~q~taAal~sE~k~LA~PaSv 490 (716)
T 1y2m_A 412 NFQAAAVANTMEKTRLGLAQIGKLNFTQLTEMLNAGMNRGLPSCLAA-EDPSLSYHCKGLDIAAAAYTSELGHLANPVTT 490 (716)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTSTTCCGGGCS-SCGGGCCTTHHHHHHHHHHHHHHHHHTSCSGG
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCChhhCC-CCCCcCcchHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999998899999987 37999999999999999999999999999999
Q ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCCCCC
Q 016039 159 HVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKNTISQVAKKVLTMGVNGELHP 238 (396)
Q Consensus 159 ~~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (396)
|++|+++|||||||||++||||+.+++||+++|+|||||++|||+|||+++++|...+++.+.++.++++.
T Consensus 491 ds~pts~~~ED~vSmg~~aArk~~~~venl~~vlAiEll~a~QAidlR~~~~~~~~~~~~~~~~~~~~~~~--------- 561 (716)
T 1y2m_A 491 HVQPAEMANQAVNSLALISARRTTESNDVLSLLLATHLYCVLQAIDLRAIEFEFKKQFGPAIVSLIDQHFG--------- 561 (716)
T ss_dssp GCCCBTTTTBSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------
T ss_pred cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999998872
Q ss_pred CccCHHHHH-HHHhhhccccccCCCCCCchHHHHH-------HHHHHHHHHhcccccccCcchhHhhhHHHHHHHHHhhc
Q 016039 239 SRFCEKDLL-KVVDREYVFSYADDPCSATYPLMRK-------LRQVLVDHALTNNEDLKNANASIFLKIGAFEEELKTLL 310 (396)
Q Consensus 239 dR~~~~dl~-~~~~~~~~~~~~~d~~~~~~~l~~~-------l~~vl~~~~l~~~~~~~~~~~~~~~~i~~fe~el~~~L 310 (396)
.|++++|+. ++.+.++.+.+..|+|+.+||+|+| ++++|++|+ +++ +++|++|+.|+++++++|
T Consensus 562 ~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~l~~r~~~~~~~~~~~l~~~~-~~~-------~~~~~~i~~f~~~l~~~l 633 (716)
T 1y2m_A 562 SAMTGSNLRDELVEKVNKTLAKRLEQTNSYDLVPRWHDAFSFAAGTVVEVL-SST-------SLSLAAVNAWKVAAAESA 633 (716)
T ss_dssp TTTTTSSHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHT-TTS-------CCBHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHhhhcccCCCChHHHHHHHHHHHHHHHHHHH-hcc-------ccHHHHHHHHHHHHHHHH
Confidence 377888899 8887543333334488999999997 899999985 322 456999999999999999
Q ss_pred HHHHHHHHHHhhcC---CCCCccccccCCcchhHHHHHhhhCcccccc-----ccccCCCccHHHHHHHHhcCcchhhHH
Q 016039 311 PKEVESARSAFESG---NLEIPNRIKECRSYPLYRFVREELGARYLTG-----EKAISPGEECDKVFTAICQGKIIDPLL 382 (396)
Q Consensus 311 ~~~~~~~R~af~~g---~~~~~~~i~~~~S~pLY~FVR~eLgvp~~~G-----~~~~T~G~~is~IyeAIr~G~l~d~ll 382 (396)
+++|+++|++|++| .+++++++ ||||||||+|||+|||||||+| ++++|||+||||||||||+|+|++|||
T Consensus 634 ~~~~~~~R~~f~~~~~~~~~~~~~l-g~~S~plY~fVR~eLg~~~~~G~~~~g~~~~t~g~~~~~v~~ai~~g~~~~~~~ 712 (716)
T 1y2m_A 634 ISLTRQVRETFWSAASTSSPALSYL-SPRTQILYAFVREELGVKARRGDVFLGKQEVTIGSNVSKIYEAIKSGRINNVLL 712 (716)
T ss_dssp HHHHHHHHHHHHHSCGGGCGGGGTS-CTTHHHHHHHHHTTSCCCCCCCHHHHTSCCSCHHHHHHHHHHHHHTSTTHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccchhhh-cccchHHHHHHHHHcCCCccccccccCCCCCCCcccHHHHHHHHHcCccHHHHH
Confidence 99999999999987 67899977 8999999999999999999997 788999999999999999999999999
Q ss_pred Hhhc
Q 016039 383 ECLK 386 (396)
Q Consensus 383 ~cl~ 386 (396)
+||+
T Consensus 713 ~~~~ 716 (716)
T 1y2m_A 713 KMLA 716 (716)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 9985
No 4
>3unv_A ADMH; MIO, lyase; HET: KWS SFE PHE; 1.54A {Pantoea agglomerans}
Probab=100.00 E-value=2.1e-72 Score=584.32 Aligned_cols=247 Identities=26% Similarity=0.426 Sum_probs=230.8
Q ss_pred ChhhhcCCccchhhhhcc-----cC----CCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCC
Q 016039 1 MEHILDGSSYVEAAQKFH-----EI----DPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSR 71 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~~~~-----~~----~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~ 71 (396)
||++|+||++++.+.+.+ .. ....+++||||||||+||||||++|+|++++++|++||||+||||+||+++
T Consensus 279 ir~lL~gS~l~~~~~~~r~~~~~~~~~~~~~~~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~le~ElNS~tDNPli~~~~ 358 (547)
T 3unv_A 279 IWETLADSSLAVNEHEVEKLIAEEMDGLVKASNHQIEDAYSIRCTPQILGPVADTLKNIKQTLTNELNSSNDNPLIDQTT 358 (547)
T ss_dssp HHHHTTTCSSSBCHHHHHHHHHHHCSSSCCCCSCCSSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSEEETTT
T ss_pred HHHHhcCCcccccccccccccccccccccccccCcCcCCccccchhHHhHHHHHHHHHHHHHHHHHHccCCCCCceeCCC
Confidence 689999999998765321 11 123456999999999999999999999999999999999999999999998
Q ss_pred CccccCCCCCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhh
Q 016039 72 NKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 151 (396)
Q Consensus 72 ~~v~~ggNF~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~ 151 (396)
|+++|||||||+||+++||+|++|++++|+++|||+.+|+||.+|+|||+||++ ++||+|+|||++||++|||++|||+
T Consensus 359 g~v~sgGNFhg~pva~amD~l~iAla~lg~iserR~~~Lvnp~~s~GLP~fL~~-~~~glnsGfmi~Q~taaal~sE~k~ 437 (547)
T 3unv_A 359 EEVFHNGHFHGQYVSMAMDHLNIALVTMMNLANRRIDRFMDKSNSNGLPPFLCA-ENAGLRLGLMGGQFMTASITAESRA 437 (547)
T ss_dssp TEEECCCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCCGGGCC-SSBTTBCTTTTHHHHHHHHHHHHHH
T ss_pred CceecCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCChhhcC-CCCCcccccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998899999985 3799999999999999999999999
Q ss_pred hcCCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhcC
Q 016039 152 LANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKNTISQVAKKVLTMG 231 (396)
Q Consensus 152 La~P~s~~~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
||+|+|+|++|++++||||||||++||||+.++++|+++|+|||||++|||+|||.. .+++++++++|+.+|+.|+
T Consensus 438 La~PaSvds~pts~~qED~vSmg~~aArk~~~~ven~~~vlAiEll~a~QAidlr~~-~~~s~~~~~~~~~vR~~Vp--- 513 (547)
T 3unv_A 438 SCMPMSIQSLSTTGDFQDIVSFGLVAARRVREQLKNLKYVFSFELLCACQAVDIRGT-AGLSKRTRALYDKTRTLVP--- 513 (547)
T ss_dssp TCCCSTTCCCCBTTTTBCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-TTCCHHHHHHHHHHHTTSC---
T ss_pred hcCCCccCCccccCcchhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCHHHHHHHHHHHHhCC---
Confidence 999999999999999999999999999999999999999999999999999999964 5789999999999999988
Q ss_pred CCCCCCCCccCHHHHHHHHhhhcc
Q 016039 232 VNGELHPSRFCEKDLLKVVDREYV 255 (396)
Q Consensus 232 ~~~~l~~dR~~~~dl~~~~~~~~~ 255 (396)
++++||++.+||+++.+.+..
T Consensus 514 ---~~~~DR~l~~dI~~~~~~i~~ 534 (547)
T 3unv_A 514 ---YLEEDKTISDYIESIAQTVLT 534 (547)
T ss_dssp ---CCSSCCCCHHHHHHHHHHTSC
T ss_pred ---CccCCCCChHHHHHHHHHHHc
Confidence 999999999999999987754
No 5
>2nyn_A Phenylalanine/histidine ammonia-lyase; methylidene imidazolone prosthetic group; HET: MDO; 1.90A {Anabaena variabilis} PDB: 3czo_A* 2nyf_A*
Probab=100.00 E-value=3.3e-71 Score=577.11 Aligned_cols=253 Identities=33% Similarity=0.422 Sum_probs=229.6
Q ss_pred ChhhhcCCccchhhh-hcccCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCccccCCC
Q 016039 1 MEHILDGSSYVEAAQ-KFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGN 79 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~-~~~~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~~~v~~ggN 79 (396)
||++|+||++++... +.+. ....+++||||||||+||||||++|+|++++++|++||||++|||+|++++|+++||||
T Consensus 282 ir~lL~gS~l~~~~~~~~~~-~~~~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~le~ElNS~tDNPlI~~~~g~v~sgGN 360 (565)
T 2nyn_A 282 MISLLANSQLVRDELDGKHD-YRDHELIQDRYSLRCLPQYLGPIVDGISQIAKQIEIEINSVTDNPLIDVDNQASYHGGN 360 (565)
T ss_dssp HHHHHTTCSSSBCCTTCC---------CCSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHTSCCSSSEEEGGGTEEECCCT
T ss_pred HHHHhccCcccccccccccc-ccCCCcCcCCcccccchhhhHHHHHHHHHHHHHHHHHHhcCCCCCeEeCCCCeeccCCC
Confidence 689999999998720 0010 01146899999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhhcCC-CCc
Q 016039 80 FQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANP-VTN 158 (396)
Q Consensus 80 F~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~La~P-~s~ 158 (396)
|||+||+++||++++|++++|++++||+.+|+||.+|+|||+||+++++||+|+|||++||++|||++|||+||+| +|+
T Consensus 361 Fhg~~va~a~D~l~iAla~lg~lserR~~~Lvdp~~s~GLP~fL~~~~~~glnsGfmi~q~taaal~sE~k~La~P~aSv 440 (565)
T 2nyn_A 361 FLGQYVGMGMDHLRYYIGLLAKHLDVQIALLASPEFSNGLPPSLLGNRERKVNMGLKGLQICGNSIMPLLTFYGNSIADR 440 (565)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCCGGGCSCTTSTTCCTTHHHHHHHHHHHHHHHHHTSCCGGG
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCChhhcCCCCCCcccchHHHHHHHHHHHHHHHHhcCCCeec
Confidence 9999999999999999999999999999999999997799999996323999999999999999999999999999 999
Q ss_pred ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-h-------hhhhhhHHHHHHHHHHHHH--
Q 016039 159 HVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHL-E-------ENLKSTVKNTISQVAKKVL-- 228 (396)
Q Consensus 159 ~~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~-~-------~~~~~~~~~~~~~~~~~~~-- 228 (396)
|++|+++|||||||||++||||+.++++|+++|+||||+++|||+|||+. . .+++++++++|+.+|+.++
T Consensus 441 ds~pts~~qED~vSmg~~aArk~~~~v~n~~~vlAiEll~a~QAidlr~~~~~~~~~~~~~~~~~~~~~~~~vR~~vp~~ 520 (565)
T 2nyn_A 441 FPTHAEQFNQNINSQGYTSATLARRSVDIFQNYVAIALMFGVQAVDLRTYKKTGHYDARACLSPATERLYSAVRHVVGQK 520 (565)
T ss_dssp CCTTTTTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCGGGTSCHHHHHHHHHHHHHHTCC
T ss_pred ccccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCChhHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999999963 1 5789999999999999998
Q ss_pred --hcCCCCCCCCCccCHHHHHHHHhhhc
Q 016039 229 --TMGVNGELHPSRFCEKDLLKVVDREY 254 (396)
Q Consensus 229 --~~~~~~~l~~dR~~~~dl~~~~~~~~ 254 (396)
+.+.++++++||++++||.++.+.+.
T Consensus 521 ~~~~~~~~~~~~DR~l~~di~~~~~~i~ 548 (565)
T 2nyn_A 521 PTSDRPYIWNDNEQGLDEHIARISADIA 548 (565)
T ss_dssp CBTTBCSCCCGGGCCHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCcccHHHHHHHHHHHH
Confidence 45677799999999999999988775
No 6
>1gkm_A Histidase, HAL, histidine ammonia-lyase; histidine degradation; HET: MDO; 1.0A {Pseudomonas putida} SCOP: a.127.1.2 PDB: 1b8f_A* 1gkj_A* 1eb4_A* 1gk3_A 1gk2_A
Probab=100.00 E-value=2.3e-71 Score=573.92 Aligned_cols=238 Identities=26% Similarity=0.384 Sum_probs=227.4
Q ss_pred Chhhh-cCCccchhhhhcccCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCCCccccCCC
Q 016039 1 MEHIL-DGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGN 79 (396)
Q Consensus 1 ~r~lL-~GS~l~~~~~~~~~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~~~v~~ggN 79 (396)
||++| +||++++.+.+ .+++||||||||+||||||++|+|++++++|++||||+||||+|++++|+++||||
T Consensus 254 lr~lL~~gS~l~~~~~~-------~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~le~ElNS~tDNPli~~~~~~v~sgGN 326 (507)
T 1gkm_A 254 FRDLLGDSSEVSLSHKN-------ADKVQDPYSLRCQPQVMGACLTQLRQAAEVLGIEANAVSDNPLVFAAEGDVISGGN 326 (507)
T ss_dssp HHHHHCSCCHHHHHTTT-------GGGSCCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSEEETTTTEEECCCT
T ss_pred HHHHHHcCChhhhccCC-------CCcCcCCcccccchhhhHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCccccCCc
Confidence 68999 99999987531 35899999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhhcCCCCcc
Q 016039 80 FQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFLANPVTNH 159 (396)
Q Consensus 80 F~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~La~P~s~~ 159 (396)
|||+||+++||++++|++++|++|+||+.+|+||.+| |||+||++ +||+|+|||++||++|||++|||+||+|+|+|
T Consensus 327 Fhg~~va~a~D~l~iAla~l~~iserR~~~L~d~~~s-gLP~fL~~--~~glnsGfmi~q~taaal~sE~k~La~PaSvd 403 (507)
T 1gkm_A 327 FHAEPVAMAADNLALAIAEIGSLSERRISLMMDKHMS-QLPPFLVE--NGGVNSGFMIAQVTAAALASENKALSHPHSVD 403 (507)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH-SSCGGGCS--STTTCCTTHHHHHHHHHHHHHHHHHTSCSTTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCChhhcC--CCCcCccchHHHHHHHHHHHHHHHhcCCcccC
Confidence 9999999999999999999999999999999999996 99999985 79999999999999999999999999999999
Q ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 016039 160 VQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKNTISQVAKKVLTMGVNGELHPS 239 (396)
Q Consensus 160 ~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 239 (396)
++|++++||||+|||++||||+.++++|+++|+||||+++|||+|||+ ..+++++++++|+.+|++++ ++++|
T Consensus 404 s~pts~~qED~vSmg~~aArk~~~~v~n~~~vlAiEll~a~QAidlr~-~~~~~~~~~~~~~~vR~~vp------~~~~D 476 (507)
T 1gkm_A 404 SLPTSANQEDHVSMAPAAGKRLWEMAENTRGVLAIEWLGACQGLDLRK-GLKTSAKLEKARQALRSEVA------HYDRD 476 (507)
T ss_dssp CCCBTTTTBCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST-TCCCCHHHHHHHHHHHTTSC------CCCSC
T ss_pred CccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCChHHHHHHHHHHHhCC------CccCC
Confidence 999999999999999999999999999999999999999999999996 46789999999999999998 99999
Q ss_pred ccCHHHHHHHHhhhcc
Q 016039 240 RFCEKDLLKVVDREYV 255 (396)
Q Consensus 240 R~~~~dl~~~~~~~~~ 255 (396)
|++.+||.++.+.+..
T Consensus 477 R~l~~di~~~~~~l~~ 492 (507)
T 1gkm_A 477 RFFAPDIEKAVELLAK 492 (507)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHc
Confidence 9999999999887754
No 7
>2qve_A Tyrosine aminomutase; MIO, enediyne, transferase; HET: MDO 247; 2.00A {Streptomyces globisporus} PDB: 2rjr_A* 2rjs_A* 2ohy_A* 3kdz_A* 3kdy_A*
Probab=100.00 E-value=9.5e-71 Score=571.44 Aligned_cols=244 Identities=29% Similarity=0.436 Sum_probs=227.9
Q ss_pred ChhhhcCCccchhhhhcc-----------cCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeec
Q 016039 1 MEHILDGSSYVEAAQKFH-----------EIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDV 69 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~~~~-----------~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~ 69 (396)
||++|+||+++..+.+.+ ..++..+++||||||||+||||||++|+|++++++|++||||+||||+|+
T Consensus 254 lr~lL~gS~l~~~~~~~~~~~~~~~~~~~~~~~~~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~le~ElNS~tDNPli~- 332 (526)
T 2qve_A 254 MRALMRGSGLTVEHADLRRELQKDKEAGKDVQRSEIYLQKAYSLRAIPQVVGAVRDTLYHARHKLRIELNSANDNPLFF- 332 (526)
T ss_dssp HHHHHTTCSSSBCHHHHHHHHHHHCCSSCSEECCSCCSSCCGGGTSHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSBCC-
T ss_pred HHHHhccCcccccchhhhcccccccccccccccccCcCcCCeeccchhhhhHHHHHHHHHHHHHHHHHHhcCCCCCccc-
Confidence 689999999998764311 12334569999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHH
Q 016039 70 SRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSEL 149 (396)
Q Consensus 70 ~~~~v~~ggNF~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~ 149 (396)
++|+++|||||||+||+++||++++|++++|++++||+.+|+||.+|+|||+||+. ++||+|+|||++||++|||++||
T Consensus 333 ~~~~v~sgGNFhg~~va~a~D~l~iAla~lg~lserR~~~L~d~~~~~gLP~fL~~-~~~glnsGfm~~q~taaal~sE~ 411 (526)
T 2qve_A 333 EGKEIFHGANFHGQPIAFAMDFVTIALTQLGVLAERQINRVLNRHLSYGLPEFLVS-GDPGLHSGFAGAQYPATALVAEN 411 (526)
T ss_dssp TTSCCBCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSSSCCGGGCS-SCBTTBCTTHHHHHHHHHHHHHH
T ss_pred CCCceecCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCChhcCC-CCCCcCcccHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999997899999943 48999999999999999999999
Q ss_pred hhhcCCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhhHHHHHHHHHHHHH
Q 016039 150 QFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEEN-LKSTVKNTISQVAKKVL 228 (396)
Q Consensus 150 ~~La~P~s~~~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~~~-~~~~~~~~~~~~~~~~~ 228 (396)
|+|| |+|+|++|+++|||||||||++||||+.++++|+++|+||||+++|||+|||+. .+ ++++++++|+.+|+.++
T Consensus 412 k~La-PaSvds~pts~~~ED~vSmg~~aArk~~~~v~n~~~vlAiEll~a~QAidlr~~-~~~~~~~~~~~~~~vR~~vp 489 (526)
T 2qve_A 412 RTIG-PASTQSVPSNGDNQDVVSMGLISARNARRVLSNNNKILAVEYLAAAQAVDISGR-FDGLSPAAKATYEAVRRLVP 489 (526)
T ss_dssp TTCC-CSTTCCCCBTTTTBCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-GGGSCHHHHHHHHHHHHHSC
T ss_pred HHhC-CCccCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccCCChhHHHHHHHHHHhCC
Confidence 9999 999999999999999999999999999999999999999999999999999964 45 89999999999999998
Q ss_pred hcCCCCCCCCCccCHHHHHHHHhhhc
Q 016039 229 TMGVNGELHPSRFCEKDLLKVVDREY 254 (396)
Q Consensus 229 ~~~~~~~l~~dR~~~~dl~~~~~~~~ 254 (396)
++++||++.+||.++.+.+.
T Consensus 490 ------~~~~DR~l~~di~~~~~~l~ 509 (526)
T 2qve_A 490 ------TLGVDRYMADDIELVADALS 509 (526)
T ss_dssp ------CCCSCCCCHHHHHHHHHHHH
T ss_pred ------CccCCcCcHHHHHHHHHHHH
Confidence 99999999999999988774
No 8
>2o6y_A Putative histidine ammonia-lyase; methylidene imidazolone prosthetic group; HET: MDO; 1.50A {Rhodobacter sphaeroides} PDB: 2o7b_A* 2o7d_A* 2o7e_A* 2o78_A* 2o7f_A*
Probab=100.00 E-value=7.5e-71 Score=571.67 Aligned_cols=245 Identities=27% Similarity=0.387 Sum_probs=228.5
Q ss_pred ChhhhcCCccchhhh------hcccCCCCCCCCCCcccccchhhhhhHHHHHHHHHHHHHHHHhhcCCCCCeeecCCC--
Q 016039 1 MEHILDGSSYVEAAQ------KFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRN-- 72 (396)
Q Consensus 1 ~r~lL~GS~l~~~~~------~~~~~~~~~~~~QD~ySlR~~PQv~G~~~d~l~~a~~~i~~EiNS~~DNPli~~~~~-- 72 (396)
||++|+||++++.+. +.+..++..+++||||||||+||||||++|+|++++++|++||||++|||+ ++++|
T Consensus 262 ir~lL~gS~l~~~~~~~~~~~~~~~~~~~~~~vQD~YSlRc~PQv~Ga~~d~l~~a~~~l~~ElNS~tDNPl-~~~~~~~ 340 (521)
T 2o6y_A 262 LRARVDGSARVVRHVIAERRLDAGDIGTEPEAGQDAYSLRCAPQVLGAGFDTLAWHDRVLTIELNAVTDNPV-FPPDGSV 340 (521)
T ss_dssp HHHHTTTCSSSBCCCGGGCBCCGGGCSBCSSCSSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSB-CCTTCSS
T ss_pred HHHHhccCccccccccccccccccccccccCcCcCcccccchhhhhHHHHHHHHHHHHHHHHHHhcCCcCCC-CCCCCCc
Confidence 689999999998764 333334446799999999999999999999999999999999999999999 98888
Q ss_pred ccccCCCCCcchhHHHhHhHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHhhh
Q 016039 73 KALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQFL 152 (396)
Q Consensus 73 ~v~~ggNF~~~~va~a~d~l~~Ala~l~~~~~~r~~~L~~p~~~~gLP~~L~~~~~~~~~~g~~~~q~~~aal~aE~~~L 152 (396)
+++|||||||+||+++||++++|++++|++++||+.+|+||.+|+|||+||+. ++||+|+|||++||++|||++|||+|
T Consensus 341 ~v~sgGNFhg~~va~a~D~l~iAla~l~~iserR~~~L~~~~~~~gLP~fL~~-~~~glnsGfm~~q~taaal~sE~k~L 419 (521)
T 2o6y_A 341 PALHGGNFMGQHVALTSDALATAVTVLAGLAERQIARLTDERLNRGLPPFLHR-GPAGLNSGFMGAQVTATALLAEMRAT 419 (521)
T ss_dssp SCBCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCGGGCC-SSBTTBCTTHHHHHHHHHHHHHHHTB
T ss_pred eeccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCChhcCC-CCCCcccchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998899999943 48999999999999999999999999
Q ss_pred cCCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hh-hhhhHHHHHHHHHHHHHhc
Q 016039 153 ANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLE-EN-LKSTVKNTISQVAKKVLTM 230 (396)
Q Consensus 153 a~P~s~~~~~~~~~~eD~~S~a~~aar~~~~~v~~l~~i~A~ell~a~QA~dlR~~~-~~-~~~~~~~~~~~~~~~~~~~ 230 (396)
| |+|+|++|+++|||||||||++||||+.++++|+++|+||||+++|||+|||... .+ ++++++++|+.+|+.++
T Consensus 420 a-PaS~ds~pts~~~ED~vSmg~~aArk~~~~v~n~~~vlAiell~a~QAidlr~~~~~~~~~~~~~~~~~~vR~~vp-- 496 (521)
T 2o6y_A 420 G-PASIHSISTNAANQDVVSLGTIAARLCREKIDRWAEILAILALCLAQAAELRCGSGLDGVSPAGKKLVQALREQFP-- 496 (521)
T ss_dssp C-CSGGGCCCBTTTTBCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHTTSC--
T ss_pred C-CCccCcccccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChhHHHHHHHHHHhCC--
Confidence 9 9999999999999999999999999999999999999999999999999999533 45 89999999999999988
Q ss_pred CCCCCCCCCccCHHHHHHHHhhhc
Q 016039 231 GVNGELHPSRFCEKDLLKVVDREY 254 (396)
Q Consensus 231 ~~~~~l~~dR~~~~dl~~~~~~~~ 254 (396)
++++||++.+||.++.+.+.
T Consensus 497 ----~~~~DR~l~~di~~~~~~l~ 516 (521)
T 2o6y_A 497 ----PLETDRPLGQEIAALATHLL 516 (521)
T ss_dssp ----CCSSCCCCHHHHHHHHHHHT
T ss_pred ----CccCCcCcHHHHHHHHHHHH
Confidence 99999999999999988764
No 9
>1gkm_A Histidase, HAL, histidine ammonia-lyase; histidine degradation; HET: MDO; 1.0A {Pseudomonas putida} SCOP: a.127.1.2 PDB: 1b8f_A* 1gkj_A* 1eb4_A* 1gk3_A 1gk2_A
Probab=21.39 E-value=1.7e+02 Score=30.00 Aligned_cols=74 Identities=11% Similarity=0.121 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHhhcHHHHHHHHHHhh-cCCCCCccccccCCcchhHHHHHhhhCccccccccccCCCccHHHHHHHHhcC
Q 016039 297 LKIGAFEEELKTLLPKEVESARSAFE-SGNLEIPNRIKECRSYPLYRFVREELGARYLTGEKAISPGEECDKVFTAICQG 375 (396)
Q Consensus 297 ~~i~~fe~el~~~L~~~~~~~R~af~-~g~~~~~~~i~~~~S~pLY~FVR~eLgvp~~~G~~~~T~G~~is~IyeAIr~G 375 (396)
.+...--+.+...+.-+.-.+-++.+ .+ |.. .+.++..+|+.||+. ||+.. +++....+|.++.+.|++|
T Consensus 423 rk~~~~v~n~~~vlAiEll~a~QAidlr~----~~~-~~~~~~~~~~~vR~~--vp~~~--~DR~l~~di~~~~~~l~~~ 493 (507)
T 1gkm_A 423 KRLWEMAENTRGVLAIEWLGACQGLDLRK----GLK-TSAKLEKARQALRSE--VAHYD--RDRFFAPDIEKAVELLAKG 493 (507)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTST----TCC-CCHHHHHHHHHHHTT--SCCCC--SCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc----ccC-CChHHHHHHHHHHHh--CCCcc--CCcCcHHHHHHHHHHHHcC
Confidence 33333444455555555444445544 32 222 267899999999996 78774 5678899999999999999
Q ss_pred cchh
Q 016039 376 KIID 379 (396)
Q Consensus 376 ~l~d 379 (396)
++..
T Consensus 494 ~~~~ 497 (507)
T 1gkm_A 494 SLTG 497 (507)
T ss_dssp TTGG
T ss_pred CHHh
Confidence 9754
No 10
>2qve_A Tyrosine aminomutase; MIO, enediyne, transferase; HET: MDO 247; 2.00A {Streptomyces globisporus} PDB: 2rjr_A* 2rjs_A* 2ohy_A* 3kdz_A* 3kdy_A*
Probab=17.25 E-value=1.8e+02 Score=30.04 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=39.0
Q ss_pred cCCcchhHHHHHhhhCccccccccccCCCccHHHHHHHHhcCcchhhHHH
Q 016039 334 ECRSYPLYRFVREELGARYLTGEKAISPGEECDKVFTAICQGKIIDPLLE 383 (396)
Q Consensus 334 ~~~S~pLY~FVR~eLgvp~~~G~~~~T~G~~is~IyeAIr~G~l~d~ll~ 383 (396)
+.++..+|+.||+. ||+.. +++....+|..+.+.|++|++...+-+
T Consensus 474 ~~~~~~~~~~vR~~--vp~~~--~DR~l~~di~~~~~~l~~~~~~~~~~~ 519 (526)
T 2qve_A 474 SPAAKATYEAVRRL--VPTLG--VDRYMADDIELVADALSRGEFLRAIAR 519 (526)
T ss_dssp CHHHHHHHHHHHHH--SCCCC--SCCCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred ChhHHHHHHHHHHh--CCCcc--CCcCcHHHHHHHHHHHHcCcHHHHHHH
Confidence 67899999999996 77774 567889999999999999998766554
Done!