Query 016047
Match_columns 396
No_of_seqs 193 out of 2780
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:18:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016047.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016047hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1088 RfbB dTDP-D-glucose 4, 100.0 3.6E-39 7.9E-44 281.4 25.7 304 26-394 1-321 (340)
2 COG1087 GalE UDP-glucose 4-epi 100.0 4.5E-38 9.8E-43 276.0 22.7 296 26-390 1-322 (329)
3 PRK15181 Vi polysaccharide bio 100.0 2E-37 4.3E-42 294.7 27.1 301 25-392 15-340 (348)
4 PLN02427 UDP-apiose/xylose syn 100.0 2E-34 4.3E-39 278.2 28.2 328 14-391 4-370 (386)
5 PLN02214 cinnamoyl-CoA reducta 100.0 4.4E-34 9.5E-39 270.9 28.1 301 20-396 5-323 (342)
6 PLN02572 UDP-sulfoquinovose sy 100.0 4.8E-34 1E-38 278.2 27.5 306 22-392 44-416 (442)
7 PLN02166 dTDP-glucose 4,6-dehy 100.0 3.8E-34 8.2E-39 277.7 26.5 298 12-392 109-426 (436)
8 PLN02695 GDP-D-mannose-3',5'-e 100.0 1.1E-33 2.5E-38 270.5 27.1 297 24-391 20-331 (370)
9 PRK11908 NAD-dependent epimera 100.0 1.5E-33 3.2E-38 268.3 25.6 311 26-392 2-338 (347)
10 TIGR01472 gmd GDP-mannose 4,6- 100.0 2.5E-33 5.3E-38 266.4 26.3 311 26-391 1-341 (343)
11 PRK10217 dTDP-glucose 4,6-dehy 100.0 2.9E-33 6.3E-38 267.3 26.6 308 26-393 2-335 (355)
12 KOG1502 Flavonol reductase/cin 100.0 3.8E-33 8.2E-38 252.0 25.3 304 24-396 5-327 (327)
13 PRK08125 bifunctional UDP-gluc 100.0 4E-33 8.6E-38 285.3 27.9 314 25-394 315-654 (660)
14 PLN02653 GDP-mannose 4,6-dehyd 100.0 5.6E-33 1.2E-37 263.7 26.6 300 22-391 3-330 (340)
15 PLN00198 anthocyanidin reducta 100.0 1E-32 2.2E-37 261.7 27.1 303 22-395 6-336 (338)
16 PLN02206 UDP-glucuronate decar 100.0 9.8E-33 2.1E-37 268.3 27.4 287 26-391 120-424 (442)
17 PLN02260 probable rhamnose bio 100.0 1.4E-32 3E-37 282.7 29.3 303 24-394 5-324 (668)
18 PLN02989 cinnamyl-alcohol dehy 100.0 3.2E-32 6.9E-37 257.0 28.3 301 25-395 5-325 (325)
19 PLN02662 cinnamyl-alcohol dehy 100.0 2.1E-32 4.5E-37 257.9 26.7 298 25-395 4-321 (322)
20 KOG0747 Putative NAD+-dependen 100.0 1.2E-32 2.7E-37 238.6 21.5 302 26-392 7-325 (331)
21 PLN02986 cinnamyl-alcohol dehy 100.0 4.9E-32 1.1E-36 255.4 27.6 298 25-395 5-322 (322)
22 PLN02240 UDP-glucose 4-epimera 100.0 6.2E-32 1.3E-36 257.9 28.1 303 24-394 4-343 (352)
23 PLN02650 dihydroflavonol-4-red 100.0 5.8E-32 1.3E-36 257.8 27.6 299 25-396 5-326 (351)
24 PRK11150 rfaD ADP-L-glycero-D- 100.0 2E-32 4.4E-37 256.3 23.0 289 28-390 2-307 (308)
25 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 1.4E-31 3.1E-36 254.9 26.6 298 25-391 4-330 (349)
26 PRK10675 UDP-galactose-4-epime 100.0 2.4E-31 5.2E-36 252.4 26.9 299 26-392 1-332 (338)
27 PRK10084 dTDP-glucose 4,6 dehy 100.0 2.9E-31 6.2E-36 253.2 26.9 309 26-392 1-337 (352)
28 KOG1429 dTDP-glucose 4-6-dehyd 100.0 1.1E-31 2.5E-36 232.4 21.1 292 22-391 24-332 (350)
29 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 8.6E-31 1.9E-35 246.1 27.5 297 27-395 1-316 (317)
30 PLN02725 GDP-4-keto-6-deoxyman 100.0 2.6E-31 5.7E-36 248.5 23.2 282 29-392 1-300 (306)
31 PRK09987 dTDP-4-dehydrorhamnos 100.0 4.3E-31 9.3E-36 245.9 24.3 288 26-391 1-295 (299)
32 TIGR03466 HpnA hopanoid-associ 100.0 1.1E-30 2.3E-35 246.8 27.2 319 26-394 1-327 (328)
33 PF01073 3Beta_HSD: 3-beta hyd 100.0 5.3E-31 1.2E-35 241.6 23.0 249 29-300 1-274 (280)
34 PLN02896 cinnamyl-alcohol dehy 100.0 1.6E-30 3.6E-35 247.9 27.3 312 17-396 3-346 (353)
35 COG0451 WcaG Nucleoside-diphos 100.0 2.2E-30 4.8E-35 243.0 26.7 296 27-393 2-312 (314)
36 PLN00016 RNA-binding protein; 100.0 1.1E-30 2.4E-35 251.0 22.9 293 20-395 47-356 (378)
37 TIGR02197 heptose_epim ADP-L-g 100.0 2.3E-30 5E-35 243.1 22.9 292 28-391 1-314 (314)
38 TIGR01214 rmlD dTDP-4-dehydror 100.0 6.1E-30 1.3E-34 237.1 23.8 280 27-387 1-285 (287)
39 KOG1371 UDP-glucose 4-epimeras 100.0 8.3E-30 1.8E-34 226.3 22.4 300 24-392 1-335 (343)
40 KOG1430 C-3 sterol dehydrogena 100.0 3.9E-29 8.4E-34 230.6 25.3 328 25-393 4-349 (361)
41 TIGR01179 galE UDP-glucose-4-e 100.0 2.7E-28 5.9E-33 230.2 25.9 296 27-391 1-327 (328)
42 PLN02686 cinnamoyl-CoA reducta 100.0 3.4E-28 7.5E-33 232.4 22.2 254 20-299 48-328 (367)
43 TIGR01777 yfcH conserved hypot 100.0 2.5E-28 5.5E-33 226.7 19.5 236 28-298 1-245 (292)
44 CHL00194 ycf39 Ycf39; Provisio 100.0 2.1E-28 4.6E-33 229.9 18.3 295 26-389 1-299 (317)
45 PRK05865 hypothetical protein; 100.0 1.8E-27 3.8E-32 243.2 22.7 258 26-392 1-259 (854)
46 COG1089 Gmd GDP-D-mannose dehy 100.0 4.6E-27 1E-31 204.0 21.6 317 24-390 1-339 (345)
47 PRK07201 short chain dehydroge 99.9 8E-26 1.7E-30 233.1 27.4 253 26-298 1-271 (657)
48 PLN02583 cinnamoyl-CoA reducta 99.9 1.1E-25 2.4E-30 209.4 23.0 241 25-296 6-265 (297)
49 PF01370 Epimerase: NAD depend 99.9 4.3E-27 9.3E-32 211.5 11.5 223 28-276 1-236 (236)
50 TIGR03589 PseB UDP-N-acetylglu 99.9 1.8E-25 3.8E-30 210.5 22.5 266 24-385 3-286 (324)
51 PF04321 RmlD_sub_bind: RmlD s 99.9 1.9E-26 4.1E-31 212.7 15.2 276 26-389 1-285 (286)
52 COG1090 Predicted nucleoside-d 99.9 1.7E-25 3.6E-30 194.8 19.4 236 28-299 1-244 (297)
53 COG1091 RfbD dTDP-4-dehydrorha 99.9 1.7E-24 3.8E-29 193.2 24.9 272 27-388 2-279 (281)
54 PLN02996 fatty acyl-CoA reduct 99.9 5.7E-25 1.2E-29 216.8 23.3 267 24-298 10-361 (491)
55 PLN02657 3,8-divinyl protochlo 99.9 1.3E-23 2.9E-28 202.0 20.8 227 22-299 57-301 (390)
56 TIGR01746 Thioester-redct thio 99.9 8.2E-23 1.8E-27 195.7 26.0 323 27-395 1-367 (367)
57 PLN02778 3,5-epimerase/4-reduc 99.9 1.5E-22 3.2E-27 188.1 26.5 227 21-297 5-240 (298)
58 KOG1431 GDP-L-fucose synthetas 99.9 6.9E-24 1.5E-28 178.2 15.3 285 26-391 2-308 (315)
59 PLN02503 fatty acyl-CoA reduct 99.9 1.1E-21 2.4E-26 194.8 22.4 259 25-296 119-474 (605)
60 PRK12320 hypothetical protein; 99.9 8E-21 1.7E-25 190.8 24.2 202 26-293 1-202 (699)
61 PLN02260 probable rhamnose bio 99.9 1.6E-20 3.4E-25 193.6 23.1 222 24-295 379-609 (668)
62 TIGR03649 ergot_EASG ergot alk 99.9 9.9E-21 2.1E-25 175.3 16.8 222 27-322 1-229 (285)
63 PF02719 Polysacc_synt_2: Poly 99.8 2.4E-21 5.2E-26 174.1 9.2 226 28-298 1-251 (293)
64 COG3320 Putative dehydrogenase 99.8 1.4E-19 3E-24 165.4 19.8 253 26-292 1-289 (382)
65 COG1086 Predicted nucleoside-d 99.8 3.3E-19 7.2E-24 170.2 21.8 229 24-296 249-497 (588)
66 TIGR03443 alpha_am_amid L-amin 99.8 1.5E-18 3.3E-23 193.0 28.1 336 25-396 971-1356(1389)
67 PF07993 NAD_binding_4: Male s 99.8 1.7E-20 3.7E-25 170.0 9.6 166 30-209 1-202 (249)
68 KOG1372 GDP-mannose 4,6 dehydr 99.8 3.9E-19 8.4E-24 151.6 16.9 246 26-296 29-299 (376)
69 KOG2865 NADH:ubiquinone oxidor 99.8 9.6E-18 2.1E-22 146.1 20.0 236 16-297 52-296 (391)
70 PLN00141 Tic62-NAD(P)-related 99.8 2.3E-18 5.1E-23 156.3 15.9 225 25-292 17-250 (251)
71 PF13460 NAD_binding_10: NADH( 99.8 1.4E-18 3.1E-23 150.0 10.6 150 28-209 1-150 (183)
72 PLN03209 translocon at the inn 99.8 1.3E-17 2.8E-22 163.1 15.3 227 23-292 78-322 (576)
73 PRK06482 short chain dehydroge 99.7 6.5E-17 1.4E-21 149.0 15.8 229 24-295 1-263 (276)
74 PF05368 NmrA: NmrA-like famil 99.7 1.1E-17 2.4E-22 150.1 8.0 224 28-298 1-229 (233)
75 PRK09135 pteridine reductase; 99.7 1.1E-15 2.3E-20 138.4 17.1 214 24-282 5-248 (249)
76 KOG1221 Acyl-CoA reductase [Li 99.7 1.2E-15 2.7E-20 145.0 15.3 255 24-295 11-332 (467)
77 PRK08263 short chain dehydroge 99.6 1.6E-15 3.4E-20 139.7 13.0 237 24-297 2-265 (275)
78 PRK07806 short chain dehydroge 99.6 2.5E-15 5.5E-20 136.1 14.1 217 24-280 5-244 (248)
79 PRK12826 3-ketoacyl-(acyl-carr 99.6 1.1E-14 2.4E-19 131.9 17.2 160 23-208 4-192 (251)
80 PRK13394 3-hydroxybutyrate deh 99.6 1.1E-14 2.4E-19 132.9 15.8 160 25-208 7-193 (262)
81 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1.1E-14 2.4E-19 131.6 15.7 211 24-280 5-247 (249)
82 PRK05875 short chain dehydroge 99.6 4.1E-14 8.8E-19 130.3 18.7 229 25-297 7-273 (276)
83 COG0702 Predicted nucleoside-d 99.6 1.2E-13 2.6E-18 126.9 20.9 224 26-300 1-224 (275)
84 PRK07074 short chain dehydroge 99.6 1.8E-14 3.9E-19 131.2 14.4 230 24-292 1-254 (257)
85 TIGR01963 PHB_DH 3-hydroxybuty 99.6 8.6E-15 1.9E-19 133.0 12.2 156 26-208 2-186 (255)
86 PRK12429 3-hydroxybutyrate deh 99.6 1.3E-14 2.8E-19 132.2 13.1 156 25-208 4-189 (258)
87 PRK12745 3-ketoacyl-(acyl-carr 99.6 9.1E-14 2E-18 126.5 18.3 158 24-208 1-196 (256)
88 KOG3019 Predicted nucleoside-d 99.6 6.9E-14 1.5E-18 118.2 15.6 249 1-298 1-262 (315)
89 PRK05653 fabG 3-ketoacyl-(acyl 99.6 7.9E-14 1.7E-18 125.8 16.3 157 25-208 5-190 (246)
90 PRK12829 short chain dehydroge 99.6 2.9E-14 6.2E-19 130.3 13.2 159 23-208 9-196 (264)
91 PRK07067 sorbitol dehydrogenas 99.6 2.7E-14 5.8E-19 130.1 12.6 158 24-208 5-189 (257)
92 PRK07774 short chain dehydroge 99.6 6.2E-14 1.3E-18 127.1 14.7 215 24-281 5-248 (250)
93 PRK06180 short chain dehydroge 99.6 2.7E-13 5.8E-18 125.0 19.1 157 25-208 4-186 (277)
94 PRK06914 short chain dehydroge 99.6 2.4E-13 5.2E-18 125.5 17.6 157 24-208 2-189 (280)
95 PRK12384 sorbitol-6-phosphate 99.5 1.6E-13 3.5E-18 125.1 15.0 158 24-208 1-190 (259)
96 PRK12746 short chain dehydroge 99.5 3.6E-13 7.9E-18 122.4 17.2 157 25-208 6-196 (254)
97 PRK09134 short chain dehydroge 99.5 3E-13 6.5E-18 123.3 16.6 215 22-284 6-249 (258)
98 KOG2774 NAD dependent epimeras 99.5 8.7E-14 1.9E-18 118.3 11.4 260 7-294 27-299 (366)
99 PRK07453 protochlorophyllide o 99.5 2E-13 4.2E-18 128.7 14.8 121 24-149 5-150 (322)
100 PRK06128 oxidoreductase; Provi 99.5 1.3E-12 2.7E-17 121.9 19.6 157 25-208 55-241 (300)
101 PRK07775 short chain dehydroge 99.5 7E-13 1.5E-17 122.0 17.3 156 25-207 10-194 (274)
102 PRK06123 short chain dehydroge 99.5 1.3E-12 2.9E-17 118.2 18.9 164 24-208 1-193 (248)
103 TIGR03206 benzo_BadH 2-hydroxy 99.5 3.6E-13 7.9E-18 122.0 14.8 157 25-208 3-188 (250)
104 PRK12823 benD 1,6-dihydroxycyc 99.5 1.2E-12 2.6E-17 119.4 17.9 155 25-208 8-191 (260)
105 PRK12828 short chain dehydroge 99.5 6.7E-13 1.4E-17 119.3 15.7 156 25-207 7-189 (239)
106 PRK06179 short chain dehydroge 99.5 4.2E-13 9.2E-18 123.1 14.5 156 25-208 4-181 (270)
107 PRK07523 gluconate 5-dehydroge 99.5 7.2E-13 1.6E-17 120.5 15.6 215 24-282 9-254 (255)
108 PRK12935 acetoacetyl-CoA reduc 99.5 8.5E-13 1.8E-17 119.4 15.7 115 25-144 6-143 (247)
109 PRK06138 short chain dehydroge 99.5 7.5E-13 1.6E-17 120.1 15.4 158 24-208 4-189 (252)
110 PRK06077 fabG 3-ketoacyl-(acyl 99.5 3.6E-13 7.8E-18 122.2 13.2 214 25-280 6-246 (252)
111 COG2910 Putative NADH-flavin r 99.5 1.8E-12 3.9E-17 106.6 15.7 205 26-276 1-210 (211)
112 PRK09186 flagellin modificatio 99.5 5.3E-13 1.1E-17 121.4 14.0 165 25-207 4-203 (256)
113 PRK05557 fabG 3-ketoacyl-(acyl 99.5 3E-12 6.6E-17 115.6 18.7 115 25-144 5-142 (248)
114 PRK12827 short chain dehydroge 99.5 2.6E-12 5.6E-17 116.2 18.2 158 24-208 5-196 (249)
115 PRK07231 fabG 3-ketoacyl-(acyl 99.5 1.2E-12 2.6E-17 118.6 15.0 115 25-144 5-141 (251)
116 PRK09291 short chain dehydroge 99.5 5.3E-13 1.1E-17 121.5 12.6 116 24-144 1-132 (257)
117 PRK08063 enoyl-(acyl carrier p 99.5 1.4E-12 3.1E-17 118.1 15.3 212 25-280 4-247 (250)
118 PRK07024 short chain dehydroge 99.5 6.6E-13 1.4E-17 121.0 12.7 157 24-207 1-186 (257)
119 PRK07890 short chain dehydroge 99.5 5E-13 1.1E-17 121.7 11.9 158 24-208 4-190 (258)
120 PRK07577 short chain dehydroge 99.5 5.1E-12 1.1E-16 113.3 17.9 151 25-208 3-175 (234)
121 PRK05993 short chain dehydroge 99.5 6.1E-13 1.3E-17 122.6 11.9 155 24-207 3-183 (277)
122 PRK08219 short chain dehydroge 99.5 1.2E-12 2.6E-17 116.8 13.4 111 25-144 3-129 (227)
123 PRK08220 2,3-dihydroxybenzoate 99.4 2.5E-12 5.5E-17 116.6 15.7 155 25-208 8-184 (252)
124 PRK06194 hypothetical protein; 99.4 2.4E-12 5.3E-17 119.2 15.4 100 25-129 6-125 (287)
125 PRK07060 short chain dehydroge 99.4 2.3E-12 5E-17 116.4 14.5 157 25-208 9-186 (245)
126 PRK06197 short chain dehydroge 99.4 2E-12 4.4E-17 120.9 13.7 119 21-146 12-154 (306)
127 PRK06196 oxidoreductase; Provi 99.4 1.4E-12 3E-17 122.5 12.6 169 24-208 25-217 (315)
128 PRK08264 short chain dehydroge 99.4 3.3E-12 7.1E-17 114.9 14.5 157 24-207 5-181 (238)
129 PRK06182 short chain dehydroge 99.4 1.2E-12 2.6E-17 120.3 11.9 154 25-208 3-182 (273)
130 PRK05876 short chain dehydroge 99.4 4.2E-12 9E-17 116.9 15.4 156 24-207 5-191 (275)
131 PLN02253 xanthoxin dehydrogena 99.4 8.8E-12 1.9E-16 115.0 17.5 158 24-208 17-204 (280)
132 PRK06701 short chain dehydroge 99.4 1E-11 2.2E-16 115.2 17.6 157 25-208 46-231 (290)
133 PRK07666 fabG 3-ketoacyl-(acyl 99.4 3E-12 6.5E-17 115.2 13.6 115 25-144 7-143 (239)
134 PRK08324 short chain dehydroge 99.4 6.8E-12 1.5E-16 129.5 17.4 220 24-280 421-676 (681)
135 PRK12824 acetoacetyl-CoA reduc 99.4 1.3E-11 2.8E-16 111.4 17.1 158 24-208 1-188 (245)
136 PRK09730 putative NAD(P)-bindi 99.4 1.5E-11 3.2E-16 111.2 17.4 162 26-208 2-192 (247)
137 PRK05565 fabG 3-ketoacyl-(acyl 99.4 1.4E-11 3E-16 111.3 17.2 117 23-144 3-142 (247)
138 PRK06101 short chain dehydroge 99.4 3.8E-12 8.2E-17 114.7 13.3 155 26-207 2-176 (240)
139 PRK07326 short chain dehydroge 99.4 2E-12 4.3E-17 116.2 11.2 116 24-144 5-140 (237)
140 TIGR01830 3oxo_ACP_reduc 3-oxo 99.4 1.9E-11 4.2E-16 109.8 17.5 112 28-144 1-135 (239)
141 PRK05717 oxidoreductase; Valid 99.4 1.8E-12 3.9E-17 117.9 10.8 162 21-209 6-193 (255)
142 PRK06500 short chain dehydroge 99.4 3.3E-12 7.1E-17 115.6 12.4 158 24-208 5-186 (249)
143 PRK08251 short chain dehydroge 99.4 7.4E-12 1.6E-16 113.3 14.4 158 24-207 1-189 (248)
144 PRK08267 short chain dehydroge 99.4 3.8E-12 8.3E-17 116.1 12.6 114 26-144 2-136 (260)
145 PRK12743 oxidoreductase; Provi 99.4 2.7E-11 5.9E-16 110.2 18.0 158 24-208 1-189 (256)
146 PRK06523 short chain dehydroge 99.4 6.6E-12 1.4E-16 114.5 13.9 157 24-208 8-188 (260)
147 PRK12937 short chain dehydroge 99.4 2.4E-11 5.3E-16 109.7 16.9 116 24-144 4-140 (245)
148 PRK10538 malonic semialdehyde 99.4 1.3E-11 2.9E-16 111.7 14.9 156 26-208 1-183 (248)
149 PRK07102 short chain dehydroge 99.4 6.6E-12 1.4E-16 113.4 12.7 155 26-207 2-183 (243)
150 PRK12936 3-ketoacyl-(acyl-carr 99.4 1E-11 2.2E-16 112.1 14.0 115 25-144 6-139 (245)
151 PRK06398 aldose dehydrogenase; 99.4 1.7E-11 3.6E-16 111.8 15.4 112 24-144 5-131 (258)
152 PRK08643 acetoin reductase; Va 99.4 1E-11 2.2E-16 112.9 14.0 157 24-207 1-187 (256)
153 PRK08213 gluconate 5-dehydroge 99.4 5.7E-12 1.2E-16 114.9 12.2 161 24-207 11-201 (259)
154 PRK07454 short chain dehydroge 99.4 6.7E-12 1.4E-16 113.1 12.2 156 25-207 6-190 (241)
155 PRK12939 short chain dehydroge 99.4 4E-11 8.7E-16 108.5 17.3 115 25-144 7-143 (250)
156 PRK07985 oxidoreductase; Provi 99.4 1.6E-11 3.5E-16 114.1 14.8 157 25-208 49-235 (294)
157 PRK05854 short chain dehydroge 99.4 1.1E-11 2.4E-16 116.2 13.5 172 21-207 10-212 (313)
158 PRK08628 short chain dehydroge 99.3 1.9E-11 4.1E-16 111.4 14.2 157 25-208 7-189 (258)
159 PRK06550 fabG 3-ketoacyl-(acyl 99.3 2.2E-11 4.8E-16 109.3 14.4 115 23-144 3-127 (235)
160 PRK07825 short chain dehydroge 99.3 1E-11 2.2E-16 114.1 12.2 115 25-144 5-137 (273)
161 PRK08217 fabG 3-ketoacyl-(acyl 99.3 3.1E-11 6.8E-16 109.4 14.8 208 25-279 5-251 (253)
162 PRK07023 short chain dehydroge 99.3 1.2E-11 2.6E-16 111.7 11.9 155 26-207 2-184 (243)
163 PRK05693 short chain dehydroge 99.3 9.3E-12 2E-16 114.5 11.1 114 26-144 2-130 (274)
164 COG0300 DltE Short-chain dehyd 99.3 2.2E-11 4.8E-16 108.7 12.8 159 21-207 2-191 (265)
165 PRK05866 short chain dehydroge 99.3 2.2E-11 4.8E-16 113.0 13.6 115 25-144 40-178 (293)
166 PRK06181 short chain dehydroge 99.3 1.7E-11 3.6E-16 112.0 12.5 155 26-207 2-185 (263)
167 PRK06171 sorbitol-6-phosphate 99.3 2.7E-11 5.9E-16 110.8 13.8 114 24-144 8-145 (266)
168 PRK05650 short chain dehydroge 99.3 2.2E-11 4.7E-16 111.8 13.1 155 26-208 1-185 (270)
169 PRK07856 short chain dehydroge 99.3 2.2E-11 4.8E-16 110.5 12.9 115 24-144 5-135 (252)
170 PRK06057 short chain dehydroge 99.3 1.3E-11 2.8E-16 112.3 11.3 157 25-208 7-190 (255)
171 PRK05786 fabG 3-ketoacyl-(acyl 99.3 8.8E-12 1.9E-16 112.1 10.0 158 25-208 5-186 (238)
172 PRK08177 short chain dehydroge 99.3 2.5E-11 5.5E-16 108.2 12.4 102 26-132 2-118 (225)
173 PRK08642 fabG 3-ketoacyl-(acyl 99.3 1.6E-11 3.5E-16 111.4 11.3 157 24-207 4-194 (253)
174 PRK06947 glucose-1-dehydrogena 99.3 1.9E-11 4.2E-16 110.6 11.8 103 24-131 1-125 (248)
175 TIGR01832 kduD 2-deoxy-D-gluco 99.3 2.7E-11 5.8E-16 109.6 12.5 158 24-208 4-189 (248)
176 PRK07904 short chain dehydroge 99.3 6.8E-11 1.5E-15 107.4 15.2 154 24-207 7-194 (253)
177 PRK06953 short chain dehydroge 99.3 2.7E-11 5.9E-16 107.8 12.1 163 26-207 2-179 (222)
178 PRK08017 oxidoreductase; Provi 99.3 3.3E-11 7.2E-16 109.5 12.3 114 24-144 1-133 (256)
179 TIGR01829 AcAcCoA_reduct aceto 99.3 1.7E-10 3.7E-15 103.9 16.8 114 26-144 1-137 (242)
180 PRK06949 short chain dehydroge 99.3 5.4E-11 1.2E-15 108.3 13.5 104 23-131 7-130 (258)
181 PRK07063 short chain dehydroge 99.3 5.2E-11 1.1E-15 108.6 13.4 115 25-144 7-145 (260)
182 PRK09242 tropinone reductase; 99.3 2E-10 4.2E-15 104.6 17.1 158 24-208 8-196 (257)
183 PRK12742 oxidoreductase; Provi 99.3 4.5E-11 9.7E-16 107.4 12.7 158 24-207 5-181 (237)
184 COG4221 Short-chain alcohol de 99.3 1.3E-10 2.8E-15 101.0 14.5 155 25-207 6-188 (246)
185 PRK06463 fabG 3-ketoacyl-(acyl 99.3 4.7E-11 1E-15 108.6 12.5 115 25-144 7-138 (255)
186 PRK08278 short chain dehydroge 99.3 1.1E-10 2.3E-15 107.4 14.9 104 24-132 5-135 (273)
187 PRK06841 short chain dehydroge 99.3 4.3E-11 9.4E-16 108.8 12.1 116 24-144 14-148 (255)
188 PRK06124 gluconate 5-dehydroge 99.3 1.2E-10 2.6E-15 105.9 14.5 116 24-144 10-147 (256)
189 PRK08226 short chain dehydroge 99.3 4.7E-11 1E-15 109.1 11.6 116 24-144 5-141 (263)
190 PRK12744 short chain dehydroge 99.3 1.3E-10 2.9E-15 105.7 14.6 104 24-132 7-134 (257)
191 PRK07814 short chain dehydroge 99.3 5.6E-11 1.2E-15 108.7 11.9 116 24-144 9-147 (263)
192 PRK07478 short chain dehydroge 99.3 9.2E-11 2E-15 106.6 13.3 116 24-144 5-143 (254)
193 PRK08265 short chain dehydroge 99.2 8.9E-11 1.9E-15 107.2 13.1 115 25-144 6-137 (261)
194 PRK06935 2-deoxy-D-gluconate 3 99.2 8.2E-11 1.8E-15 107.2 12.8 157 24-207 14-198 (258)
195 PRK09072 short chain dehydroge 99.2 7.2E-11 1.5E-15 107.9 12.5 114 25-143 5-138 (263)
196 PRK06172 short chain dehydroge 99.2 7.3E-11 1.6E-15 107.2 12.0 115 25-144 7-144 (253)
197 PRK07677 short chain dehydroge 99.2 5.9E-11 1.3E-15 107.7 11.4 115 25-144 1-138 (252)
198 PRK07576 short chain dehydroge 99.2 7.1E-11 1.5E-15 108.0 11.9 117 23-144 7-144 (264)
199 PRK12748 3-ketoacyl-(acyl-carr 99.2 8.8E-11 1.9E-15 106.9 12.0 116 24-144 4-154 (256)
200 PRK08085 gluconate 5-dehydroge 99.2 8.6E-11 1.9E-15 106.8 11.9 157 25-208 9-194 (254)
201 PRK08703 short chain dehydroge 99.2 1.9E-10 4.1E-15 103.5 14.0 114 25-143 6-146 (239)
202 PRK06114 short chain dehydroge 99.2 1.3E-10 2.8E-15 105.7 13.0 159 25-208 8-196 (254)
203 PRK07109 short chain dehydroge 99.2 1.6E-10 3.5E-15 109.3 13.8 116 25-145 8-145 (334)
204 PRK07035 short chain dehydroge 99.2 1.1E-10 2.3E-15 106.0 12.0 117 23-144 6-145 (252)
205 PRK06198 short chain dehydroge 99.2 1.9E-10 4E-15 104.9 13.2 158 24-208 5-193 (260)
206 PRK07069 short chain dehydroge 99.2 2.5E-10 5.5E-15 103.4 13.8 112 27-145 1-139 (251)
207 PRK07201 short chain dehydroge 99.2 1.3E-10 2.9E-15 120.1 13.3 159 22-207 368-557 (657)
208 PRK06113 7-alpha-hydroxysteroi 99.2 1.7E-10 3.6E-15 105.0 12.3 116 24-144 10-146 (255)
209 PRK12481 2-deoxy-D-gluconate 3 99.2 1.5E-10 3.2E-15 105.1 11.8 115 25-144 8-143 (251)
210 PRK12747 short chain dehydroge 99.2 2.6E-10 5.7E-15 103.5 13.4 157 25-208 4-194 (252)
211 PRK07832 short chain dehydroge 99.2 2.6E-10 5.7E-15 104.7 13.5 114 26-144 1-138 (272)
212 PRK05867 short chain dehydroge 99.2 2.1E-10 4.6E-15 104.1 12.6 104 24-132 8-131 (253)
213 TIGR02632 RhaD_aldol-ADH rhamn 99.2 4E-10 8.6E-15 115.9 15.9 155 25-206 414-600 (676)
214 PRK07041 short chain dehydroge 99.2 3.7E-10 8E-15 101.0 13.8 110 29-145 1-125 (230)
215 PRK08589 short chain dehydroge 99.2 3E-10 6.6E-15 104.3 13.5 157 24-207 5-189 (272)
216 PRK08277 D-mannonate oxidoredu 99.2 2E-10 4.4E-15 105.8 12.3 157 25-208 10-210 (278)
217 PRK08945 putative oxoacyl-(acy 99.2 3.7E-10 8E-15 102.2 13.7 118 22-144 9-152 (247)
218 PRK07097 gluconate 5-dehydroge 99.2 3.9E-10 8.5E-15 103.1 13.8 158 24-208 9-195 (265)
219 PRK12938 acetyacetyl-CoA reduc 99.2 3E-10 6.6E-15 102.6 12.9 115 25-144 3-140 (246)
220 PRK08993 2-deoxy-D-gluconate 3 99.2 3.4E-10 7.3E-15 102.9 13.0 116 25-145 10-146 (253)
221 TIGR01289 LPOR light-dependent 99.2 3.8E-10 8.3E-15 105.8 13.8 121 23-148 1-147 (314)
222 TIGR02415 23BDH acetoin reduct 99.2 2.6E-10 5.7E-15 103.5 12.2 114 26-144 1-137 (254)
223 PRK06484 short chain dehydroge 99.2 2.6E-10 5.7E-15 114.6 13.3 160 22-208 266-450 (520)
224 PRK06483 dihydromonapterin red 99.2 1.7E-10 3.7E-15 103.6 10.7 104 24-132 1-119 (236)
225 PRK07062 short chain dehydroge 99.2 5.1E-10 1.1E-14 102.4 14.0 116 24-144 7-146 (265)
226 PRK05855 short chain dehydroge 99.2 3.3E-10 7.1E-15 115.4 13.7 155 25-207 315-500 (582)
227 PRK06139 short chain dehydroge 99.2 4.1E-10 8.9E-15 106.1 13.3 116 24-144 6-143 (330)
228 PRK08339 short chain dehydroge 99.2 4.8E-10 1E-14 102.5 13.2 155 25-207 8-192 (263)
229 smart00822 PKS_KR This enzymat 99.2 4.1E-10 8.9E-15 95.9 11.9 112 26-144 1-136 (180)
230 PRK05884 short chain dehydroge 99.2 3E-10 6.5E-15 101.2 11.1 113 26-143 1-130 (223)
231 PRK07578 short chain dehydroge 99.1 8E-10 1.7E-14 96.5 13.6 102 26-143 1-111 (199)
232 PRK06924 short chain dehydroge 99.1 3.8E-10 8.3E-15 102.3 12.0 114 26-144 2-141 (251)
233 PRK05872 short chain dehydroge 99.1 5.1E-10 1.1E-14 104.1 12.7 116 24-144 8-143 (296)
234 TIGR03325 BphB_TodD cis-2,3-di 99.1 2.5E-10 5.3E-15 104.3 10.3 103 25-132 5-129 (262)
235 PRK06940 short chain dehydroge 99.1 5.5E-10 1.2E-14 102.8 12.1 101 24-132 1-114 (275)
236 PRK08936 glucose-1-dehydrogena 99.1 1.5E-09 3.2E-14 99.1 14.4 116 23-144 5-145 (261)
237 PRK07831 short chain dehydroge 99.1 1.4E-09 2.9E-14 99.4 13.6 105 23-132 15-142 (262)
238 PRK06200 2,3-dihydroxy-2,3-dih 99.1 7.1E-10 1.5E-14 101.3 11.1 115 25-144 6-143 (263)
239 KOG1203 Predicted dehydrogenas 99.1 1.5E-09 3.3E-14 102.1 13.3 160 25-207 79-248 (411)
240 PRK12367 short chain dehydroge 99.1 5.6E-10 1.2E-14 100.8 9.7 103 25-132 14-121 (245)
241 TIGR01831 fabG_rel 3-oxoacyl-( 99.1 7.7E-10 1.7E-14 99.5 9.7 112 28-144 1-136 (239)
242 PRK07792 fabG 3-ketoacyl-(acyl 99.0 1.9E-09 4.2E-14 100.7 12.4 103 24-131 11-133 (306)
243 PRK08416 7-alpha-hydroxysteroi 99.0 2.6E-09 5.6E-14 97.5 12.7 116 24-144 7-152 (260)
244 PRK07424 bifunctional sterol d 99.0 8.7E-10 1.9E-14 105.8 9.6 104 24-132 177-287 (406)
245 PRK09009 C factor cell-cell si 99.0 1.3E-08 2.7E-13 91.4 16.0 103 26-132 1-118 (235)
246 PRK08340 glucose-1-dehydrogena 99.0 4.1E-09 8.8E-14 96.1 12.8 114 26-144 1-138 (259)
247 PRK08261 fabG 3-ketoacyl-(acyl 99.0 3.1E-09 6.8E-14 104.8 12.5 116 24-144 209-343 (450)
248 TIGR02685 pter_reduc_Leis pter 99.0 3.8E-09 8.3E-14 96.7 11.9 102 26-132 2-140 (267)
249 PLN02780 ketoreductase/ oxidor 99.0 5.4E-09 1.2E-13 98.2 12.5 116 24-144 52-193 (320)
250 PRK06079 enoyl-(acyl carrier p 99.0 9E-09 2E-13 93.4 12.4 115 24-143 6-143 (252)
251 PRK06484 short chain dehydroge 98.9 9.6E-09 2.1E-13 103.4 12.4 116 24-144 4-141 (520)
252 PRK06125 short chain dehydroge 98.9 3.2E-08 6.9E-13 90.2 14.5 114 25-143 7-139 (259)
253 KOG4039 Serine/threonine kinas 98.9 1.1E-08 2.4E-13 83.7 9.5 150 26-210 19-174 (238)
254 KOG1205 Predicted dehydrogenas 98.9 2.8E-08 6E-13 89.7 12.9 120 24-148 11-154 (282)
255 PRK12859 3-ketoacyl-(acyl-carr 98.9 4.1E-08 8.8E-13 89.3 13.3 116 24-144 5-155 (256)
256 PRK07791 short chain dehydroge 98.9 2.2E-08 4.8E-13 92.6 11.8 102 24-130 5-135 (286)
257 PRK08594 enoyl-(acyl carrier p 98.8 8.5E-08 1.8E-12 87.3 15.0 115 24-143 6-147 (257)
258 PRK07889 enoyl-(acyl carrier p 98.8 6.5E-08 1.4E-12 88.0 13.9 104 24-132 6-134 (256)
259 PRK07533 enoyl-(acyl carrier p 98.8 5.1E-08 1.1E-12 88.8 12.6 114 25-143 10-148 (258)
260 PRK07370 enoyl-(acyl carrier p 98.8 4.7E-08 1E-12 89.1 12.3 115 24-143 5-147 (258)
261 PRK06505 enoyl-(acyl carrier p 98.8 4.2E-08 9.1E-13 90.1 11.8 155 25-207 7-194 (271)
262 PRK08159 enoyl-(acyl carrier p 98.8 7.9E-08 1.7E-12 88.3 13.2 114 25-143 10-148 (272)
263 KOG4288 Predicted oxidoreducta 98.8 3.6E-08 7.9E-13 84.2 9.7 154 19-208 46-205 (283)
264 TIGR01500 sepiapter_red sepiap 98.8 5.2E-08 1.1E-12 88.6 11.3 117 27-144 2-151 (256)
265 PRK07984 enoyl-(acyl carrier p 98.8 9.6E-08 2.1E-12 87.2 12.8 102 25-131 6-133 (262)
266 PRK08690 enoyl-(acyl carrier p 98.8 9.7E-08 2.1E-12 87.1 12.3 115 24-143 5-146 (261)
267 PRK08415 enoyl-(acyl carrier p 98.8 7.6E-08 1.7E-12 88.5 11.7 113 25-143 5-143 (274)
268 PRK08862 short chain dehydroge 98.8 1E-07 2.3E-12 85.0 12.0 102 24-130 4-127 (227)
269 PRK06997 enoyl-(acyl carrier p 98.8 1E-07 2.3E-12 86.9 12.3 115 24-143 5-145 (260)
270 PRK08303 short chain dehydroge 98.8 2.6E-07 5.7E-12 86.2 15.1 115 25-144 8-159 (305)
271 cd01336 MDH_cytoplasmic_cytoso 98.7 7.1E-08 1.5E-12 90.3 10.9 115 25-139 2-125 (325)
272 PRK05599 hypothetical protein; 98.7 2.7E-07 5.9E-12 83.4 14.3 98 26-129 1-119 (246)
273 PRK06603 enoyl-(acyl carrier p 98.7 2.2E-07 4.7E-12 84.8 12.8 115 24-143 7-146 (260)
274 KOG1208 Dehydrogenases with di 98.7 3.7E-07 8E-12 84.7 13.9 119 22-147 32-174 (314)
275 PTZ00325 malate dehydrogenase; 98.7 1.6E-07 3.5E-12 87.3 11.3 120 20-144 3-125 (321)
276 KOG1200 Mitochondrial/plastidi 98.7 1.4E-06 3.1E-11 72.8 15.3 164 24-207 13-199 (256)
277 PRK08309 short chain dehydroge 98.7 4.4E-08 9.6E-13 83.4 6.4 89 26-133 1-99 (177)
278 PF08659 KR: KR domain; Inter 98.7 2.3E-07 5E-12 79.7 10.7 112 27-144 2-136 (181)
279 PF00106 adh_short: short chai 98.6 6E-08 1.3E-12 82.0 6.7 112 26-144 1-135 (167)
280 PLN00015 protochlorophyllide r 98.6 1.2E-07 2.7E-12 88.7 9.2 115 29-148 1-141 (308)
281 KOG1209 1-Acyl dihydroxyaceton 98.6 2.9E-07 6.2E-12 77.9 9.0 102 25-131 7-125 (289)
282 KOG1210 Predicted 3-ketosphing 98.5 8.7E-07 1.9E-11 79.8 11.5 159 26-207 34-220 (331)
283 KOG1611 Predicted short chain- 98.5 1.9E-06 4.2E-11 73.9 12.9 100 26-129 4-127 (249)
284 KOG1610 Corticosteroid 11-beta 98.5 1.5E-06 3.3E-11 78.3 12.8 160 24-207 28-212 (322)
285 PRK12428 3-alpha-hydroxysteroi 98.5 3.8E-07 8.3E-12 82.2 8.6 97 41-148 1-101 (241)
286 KOG1201 Hydroxysteroid 17-beta 98.5 3.1E-06 6.7E-11 76.0 13.5 122 22-148 35-177 (300)
287 PLN00106 malate dehydrogenase 98.5 1E-06 2.2E-11 82.0 10.4 108 25-135 18-128 (323)
288 KOG4169 15-hydroxyprostaglandi 98.4 3.5E-06 7.6E-11 72.4 11.7 104 24-132 4-124 (261)
289 KOG0725 Reductases with broad 98.4 6.4E-06 1.4E-10 75.2 14.4 159 23-208 6-200 (270)
290 COG3967 DltE Short-chain dehyd 98.4 3.7E-06 8.1E-11 71.0 11.1 162 25-207 5-187 (245)
291 PRK09620 hypothetical protein; 98.4 7.3E-07 1.6E-11 79.0 6.2 74 25-103 3-97 (229)
292 PRK06732 phosphopantothenate-- 98.3 2.1E-06 4.5E-11 76.4 8.4 72 28-104 19-92 (229)
293 TIGR02813 omega_3_PfaA polyket 98.3 9.4E-06 2E-10 93.5 15.5 115 24-144 1996-2176(2582)
294 COG1028 FabG Dehydrogenases wi 98.3 8.8E-06 1.9E-10 73.6 11.8 115 24-144 4-143 (251)
295 PLN02730 enoyl-[acyl-carrier-p 98.3 1.8E-05 4E-10 73.5 13.9 115 23-143 7-178 (303)
296 PRK06720 hypothetical protein; 98.3 3E-06 6.5E-11 71.7 7.9 76 25-105 16-105 (169)
297 cd00704 MDH Malate dehydrogena 98.3 6.4E-06 1.4E-10 77.0 10.8 109 27-140 2-124 (323)
298 COG1748 LYS9 Saccharopine dehy 98.2 2.9E-06 6.3E-11 80.2 6.5 86 26-133 2-92 (389)
299 PRK05086 malate dehydrogenase; 98.1 1.9E-05 4.1E-10 73.7 10.8 112 26-143 1-117 (312)
300 TIGR01758 MDH_euk_cyt malate d 98.1 1.7E-05 3.7E-10 74.2 9.6 108 27-139 1-122 (324)
301 PRK06300 enoyl-(acyl carrier p 98.1 0.0001 2.2E-09 68.4 14.3 35 24-63 7-43 (299)
302 TIGR00715 precor6x_red precorr 98.1 2.5E-05 5.4E-10 70.4 9.3 94 26-138 1-97 (256)
303 cd01338 MDH_choloroplast_like 98.0 1.8E-05 4E-10 73.9 7.3 159 25-209 2-185 (322)
304 PF13561 adh_short_C2: Enoyl-( 97.8 3.4E-05 7.4E-10 69.4 6.2 148 32-207 1-183 (241)
305 KOG1207 Diacetyl reductase/L-x 97.8 4.1E-05 8.8E-10 63.0 5.0 103 24-131 6-121 (245)
306 KOG1014 17 beta-hydroxysteroid 97.8 7.6E-05 1.6E-09 67.5 7.0 158 23-208 47-236 (312)
307 cd01078 NAD_bind_H4MPT_DH NADP 97.7 5.5E-05 1.2E-09 65.7 5.5 72 24-100 27-104 (194)
308 PF00056 Ldh_1_N: lactate/mala 97.6 6.2E-05 1.3E-09 61.6 4.4 105 26-140 1-116 (141)
309 PRK05579 bifunctional phosphop 97.6 0.00016 3.4E-09 69.6 7.5 72 23-103 186-277 (399)
310 PF03435 Saccharop_dh: Sacchar 97.6 8.9E-05 1.9E-09 71.7 5.8 70 28-102 1-76 (386)
311 PRK14982 acyl-ACP reductase; P 97.6 3.1E-05 6.7E-10 72.4 2.0 71 24-103 154-225 (340)
312 TIGR01759 MalateDH-SF1 malate 97.5 0.00049 1.1E-08 64.4 9.4 103 25-134 3-120 (323)
313 PF13950 Epimerase_Csub: UDP-g 97.5 6.8E-05 1.5E-09 51.6 2.6 34 359-392 24-58 (62)
314 cd05294 LDH-like_MDH_nadp A la 97.5 0.00042 9.1E-09 64.7 8.0 103 26-137 1-116 (309)
315 PRK05442 malate dehydrogenase; 97.5 0.0011 2.4E-08 62.1 10.7 104 25-133 4-120 (326)
316 cd01337 MDH_glyoxysomal_mitoch 97.4 0.00093 2E-08 62.0 9.4 109 26-140 1-115 (310)
317 KOG2733 Uncharacterized membra 97.4 0.00023 5E-09 65.3 5.1 82 26-108 6-98 (423)
318 KOG1199 Short-chain alcohol de 97.4 9.7E-05 2.1E-09 60.6 2.4 101 24-129 8-131 (260)
319 TIGR01772 MDH_euk_gproteo mala 97.2 0.0017 3.7E-08 60.4 8.9 108 27-139 1-113 (312)
320 PRK00066 ldh L-lactate dehydro 97.2 0.0054 1.2E-07 57.4 12.0 101 25-138 6-118 (315)
321 PRK13656 trans-2-enoyl-CoA red 97.2 0.0012 2.5E-08 62.6 7.3 75 24-104 40-142 (398)
322 PLN00112 malate dehydrogenase 97.2 0.0033 7.2E-08 61.0 10.5 109 25-140 100-224 (444)
323 PF04127 DFP: DNA / pantothena 97.1 0.00083 1.8E-08 57.5 5.5 67 31-104 25-93 (185)
324 cd05291 HicDH_like L-2-hydroxy 97.1 0.0053 1.2E-07 57.3 10.8 99 26-137 1-112 (306)
325 TIGR02114 coaB_strep phosphopa 97.0 0.0015 3.2E-08 58.1 6.0 68 27-104 17-91 (227)
326 PLN02968 Probable N-acetyl-gam 97.0 0.0011 2.4E-08 63.4 5.3 73 24-100 37-111 (381)
327 TIGR00521 coaBC_dfp phosphopan 96.9 0.0028 6E-08 60.9 7.6 73 23-104 183-276 (390)
328 cd05295 MDH_like Malate dehydr 96.8 0.0098 2.1E-07 57.8 10.3 110 24-140 122-246 (452)
329 COG0039 Mdh Malate/lactate deh 96.8 0.008 1.7E-07 55.5 8.8 105 26-140 1-116 (313)
330 COG0569 TrkA K+ transport syst 96.7 0.0019 4.1E-08 57.3 4.5 69 26-100 1-73 (225)
331 COG3268 Uncharacterized conser 96.7 0.0011 2.4E-08 60.5 2.8 78 21-103 2-81 (382)
332 KOG1204 Predicted dehydrogenas 96.7 0.0038 8.2E-08 54.1 5.9 102 22-132 3-130 (253)
333 PRK08057 cobalt-precorrin-6x r 96.7 0.017 3.6E-07 52.0 10.1 96 24-139 1-98 (248)
334 PRK04148 hypothetical protein; 96.6 0.0025 5.5E-08 51.0 3.9 67 25-100 17-84 (134)
335 cd05290 LDH_3 A subgroup of L- 96.6 0.024 5.1E-07 52.8 10.9 101 27-138 1-115 (307)
336 PLN02602 lactate dehydrogenase 96.6 0.031 6.6E-07 53.0 11.7 105 26-140 38-152 (350)
337 PRK09496 trkA potassium transp 96.5 0.0028 6.1E-08 62.6 4.8 69 26-100 1-72 (453)
338 PRK12548 shikimate 5-dehydroge 96.5 0.0067 1.4E-07 56.1 6.7 71 24-100 125-206 (289)
339 cd05293 LDH_1 A subgroup of L- 96.5 0.034 7.5E-07 51.9 11.1 105 25-140 3-118 (312)
340 KOG1494 NAD-dependent malate d 96.5 0.021 4.6E-07 51.0 9.0 110 23-135 26-138 (345)
341 PF01113 DapB_N: Dihydrodipico 96.4 0.0065 1.4E-07 48.5 5.4 69 26-100 1-74 (124)
342 PF01118 Semialdhyde_dh: Semia 96.4 0.0068 1.5E-07 48.2 5.4 34 27-64 1-35 (121)
343 TIGR01757 Malate-DH_plant mala 96.4 0.024 5.1E-07 54.3 9.9 106 25-137 44-165 (387)
344 cd00650 LDH_MDH_like NAD-depen 96.3 0.009 2E-07 54.5 6.3 107 28-140 1-117 (263)
345 KOG1478 3-keto sterol reductas 96.2 0.016 3.4E-07 51.1 6.9 79 24-102 2-98 (341)
346 PLN02819 lysine-ketoglutarate 96.2 0.0049 1.1E-07 65.9 4.5 76 25-101 569-656 (1042)
347 PTZ00117 malate dehydrogenase; 96.2 0.016 3.6E-07 54.3 7.5 102 24-136 4-116 (319)
348 PRK00048 dihydrodipicolinate r 96.1 0.019 4.1E-07 52.1 7.3 65 26-100 2-67 (257)
349 cd05292 LDH_2 A subgroup of L- 96.1 0.059 1.3E-06 50.3 10.6 98 26-136 1-110 (308)
350 TIGR01763 MalateDH_bact malate 96.0 0.021 4.5E-07 53.2 7.1 104 26-136 2-112 (305)
351 PRK14874 aspartate-semialdehyd 95.9 0.016 3.5E-07 54.8 5.8 65 26-100 2-70 (334)
352 PRK06223 malate dehydrogenase; 95.8 0.023 4.9E-07 53.1 6.7 103 26-135 3-112 (307)
353 PRK00436 argC N-acetyl-gamma-g 95.8 0.014 3.1E-07 55.3 5.2 36 24-63 1-36 (343)
354 PTZ00082 L-lactate dehydrogena 95.6 0.14 3.1E-06 48.0 11.2 99 25-136 6-122 (321)
355 PRK14106 murD UDP-N-acetylmura 95.6 0.018 3.8E-07 57.0 5.2 68 24-102 4-77 (450)
356 PRK11199 tyrA bifunctional cho 95.6 0.021 4.5E-07 54.9 5.4 47 9-63 85-131 (374)
357 PRK10669 putative cation:proto 95.6 0.02 4.3E-07 58.2 5.5 69 22-96 414-484 (558)
358 TIGR01771 L-LDH-NAD L-lactate 95.4 0.11 2.3E-06 48.4 9.3 99 30-139 1-110 (299)
359 cd00300 LDH_like L-lactate deh 95.3 0.14 3E-06 47.7 9.9 101 28-140 1-113 (300)
360 KOG1496 Malate dehydrogenase [ 95.2 0.03 6.6E-07 48.8 4.7 169 25-209 4-187 (332)
361 TIGR01915 npdG NADPH-dependent 95.2 0.023 5E-07 50.2 4.2 35 26-65 1-35 (219)
362 PRK08664 aspartate-semialdehyd 95.2 0.028 6.1E-07 53.5 4.8 37 24-64 2-38 (349)
363 PRK03659 glutathione-regulated 94.9 0.047 1E-06 56.0 5.9 71 24-100 399-471 (601)
364 PF02571 CbiJ: Precorrin-6x re 94.8 0.18 4E-06 45.3 8.6 93 26-138 1-98 (249)
365 PRK10537 voltage-gated potassi 94.8 0.17 3.6E-06 48.9 8.9 68 25-99 240-308 (393)
366 cd01080 NAD_bind_m-THF_DH_Cycl 94.8 0.096 2.1E-06 44.1 6.4 55 22-101 41-95 (168)
367 PRK09496 trkA potassium transp 94.7 0.036 7.8E-07 54.8 4.5 69 24-98 230-302 (453)
368 COG0623 FabI Enoyl-[acyl-carri 94.7 0.25 5.3E-06 43.2 8.8 104 24-132 5-133 (259)
369 PRK13982 bifunctional SbtC-lik 94.7 0.088 1.9E-06 51.7 7.0 73 22-103 253-344 (475)
370 PF02254 TrkA_N: TrkA-N domain 94.7 0.014 3E-07 45.8 1.0 66 28-99 1-68 (116)
371 TIGR01296 asd_B aspartate-semi 94.6 0.058 1.3E-06 51.0 5.4 64 27-100 1-68 (339)
372 PRK09288 purT phosphoribosylgl 94.6 0.13 2.7E-06 49.9 7.8 69 24-99 11-81 (395)
373 PRK15469 ghrA bifunctional gly 94.5 0.13 2.9E-06 48.0 7.5 64 23-100 134-197 (312)
374 TIGR01850 argC N-acetyl-gamma- 94.5 0.048 1E-06 51.8 4.5 34 26-63 1-35 (346)
375 PLN02383 aspartate semialdehyd 94.4 0.086 1.9E-06 49.9 6.0 23 25-47 7-29 (344)
376 PRK06019 phosphoribosylaminoim 94.4 0.13 2.7E-06 49.5 7.2 65 26-97 3-67 (372)
377 PRK03562 glutathione-regulated 94.0 0.083 1.8E-06 54.3 5.4 71 24-100 399-471 (621)
378 COG0289 DapB Dihydrodipicolina 94.0 0.24 5.2E-06 44.3 7.5 37 25-65 2-39 (266)
379 cd01339 LDH-like_MDH L-lactate 94.0 0.5 1.1E-05 43.9 10.2 96 28-135 1-108 (300)
380 PRK05671 aspartate-semialdehyd 93.9 0.061 1.3E-06 50.7 3.9 22 26-47 5-26 (336)
381 COG0002 ArgC Acetylglutamate s 93.9 0.13 2.9E-06 47.8 5.8 35 24-62 1-35 (349)
382 PRK12475 thiamine/molybdopteri 93.7 0.52 1.1E-05 44.6 9.8 37 22-64 21-58 (338)
383 PRK07688 thiamine/molybdopteri 93.7 0.33 7E-06 46.0 8.4 37 22-64 21-58 (339)
384 TIGR01142 purT phosphoribosylg 93.6 0.19 4E-06 48.5 6.8 66 27-99 1-68 (380)
385 KOG0172 Lysine-ketoglutarate r 93.4 0.093 2E-06 49.2 4.0 72 24-100 1-75 (445)
386 PF00899 ThiF: ThiF family; I 93.1 0.47 1E-05 38.3 7.4 33 25-63 2-35 (135)
387 COG2085 Predicted dinucleotide 93.0 0.1 2.3E-06 45.0 3.5 35 26-66 2-36 (211)
388 TIGR02853 spore_dpaA dipicolin 93.0 0.059 1.3E-06 49.7 2.2 66 24-100 150-216 (287)
389 PLN02948 phosphoribosylaminoim 93.0 0.34 7.3E-06 49.3 7.8 68 23-97 20-87 (577)
390 PF00070 Pyr_redox: Pyridine n 92.8 0.17 3.6E-06 36.7 4.0 33 27-65 1-33 (80)
391 PRK14194 bifunctional 5,10-met 92.8 0.22 4.8E-06 45.8 5.5 55 23-102 157-211 (301)
392 PLN02928 oxidoreductase family 92.8 0.18 3.9E-06 47.9 5.1 71 22-98 156-231 (347)
393 PRK14619 NAD(P)H-dependent gly 92.7 0.2 4.3E-06 46.8 5.3 33 26-64 5-37 (308)
394 TIGR01161 purK phosphoribosyla 92.7 0.27 5.7E-06 46.9 6.3 64 27-97 1-64 (352)
395 PRK08306 dipicolinate synthase 92.6 0.076 1.7E-06 49.2 2.4 66 24-100 151-217 (296)
396 COG1052 LdhA Lactate dehydroge 92.6 0.26 5.7E-06 46.2 5.9 65 22-100 143-208 (324)
397 PRK06849 hypothetical protein; 92.5 0.17 3.7E-06 48.9 4.7 36 24-64 3-38 (389)
398 TIGR02354 thiF_fam2 thiamine b 92.4 1.1 2.5E-05 38.8 9.3 34 24-63 20-54 (200)
399 PRK14175 bifunctional 5,10-met 92.4 0.26 5.6E-06 45.2 5.4 55 23-102 156-210 (286)
400 PRK11863 N-acetyl-gamma-glutam 92.4 0.24 5.2E-06 46.1 5.3 36 24-63 1-36 (313)
401 TIGR03026 NDP-sugDHase nucleot 92.3 0.22 4.8E-06 48.5 5.3 34 26-65 1-34 (411)
402 PRK06598 aspartate-semialdehyd 92.3 0.33 7.2E-06 46.2 6.1 33 26-62 2-37 (369)
403 PRK14192 bifunctional 5,10-met 92.2 0.34 7.4E-06 44.5 6.0 54 23-101 157-210 (283)
404 PRK08410 2-hydroxyacid dehydro 92.1 0.42 9.2E-06 44.7 6.7 62 22-100 142-204 (311)
405 PF03721 UDPG_MGDP_dh_N: UDP-g 92.1 0.14 2.9E-06 44.0 3.1 33 26-64 1-33 (185)
406 PRK08655 prephenate dehydrogen 92.1 0.17 3.6E-06 49.7 4.1 35 26-65 1-35 (437)
407 PRK13243 glyoxylate reductase; 92.1 0.15 3.3E-06 48.2 3.6 62 23-98 148-209 (333)
408 cd01485 E1-1_like Ubiquitin ac 92.0 1 2.2E-05 39.1 8.4 38 21-64 15-53 (198)
409 PLN02712 arogenate dehydrogena 91.9 0.24 5.1E-06 51.3 5.1 53 6-64 345-402 (667)
410 KOG1202 Animal-type fatty acid 91.9 0.25 5.4E-06 52.7 5.2 113 26-144 1769-1905(2376)
411 PRK07877 hypothetical protein; 91.8 0.31 6.6E-06 50.7 5.7 43 14-63 96-140 (722)
412 PRK06129 3-hydroxyacyl-CoA deh 91.8 0.17 3.7E-06 47.2 3.6 33 26-64 3-35 (308)
413 cd01075 NAD_bind_Leu_Phe_Val_D 91.7 0.29 6.3E-06 42.5 4.7 37 23-65 26-62 (200)
414 TIGR00978 asd_EA aspartate-sem 91.6 0.24 5.3E-06 46.9 4.5 33 26-62 1-33 (341)
415 PRK06436 glycerate dehydrogena 91.6 0.48 1E-05 44.1 6.3 60 22-98 119-178 (303)
416 TIGR03693 ocin_ThiF_like putat 91.5 0.88 1.9E-05 45.8 8.3 98 24-140 128-238 (637)
417 PLN02256 arogenate dehydrogena 91.5 0.3 6.6E-06 45.4 4.9 54 5-64 11-69 (304)
418 PRK15438 erythronate-4-phospha 91.5 0.3 6.4E-06 46.8 4.9 61 23-100 114-175 (378)
419 PRK08229 2-dehydropantoate 2-r 91.4 0.22 4.8E-06 47.2 4.0 35 24-64 1-35 (341)
420 COG0026 PurK Phosphoribosylami 91.4 0.69 1.5E-05 43.5 7.0 67 26-99 2-68 (375)
421 PRK06487 glycerate dehydrogena 91.3 0.37 8.1E-06 45.1 5.4 60 22-100 145-205 (317)
422 COG0111 SerA Phosphoglycerate 91.3 0.38 8.2E-06 45.1 5.4 66 22-100 139-205 (324)
423 PRK07574 formate dehydrogenase 91.3 0.22 4.9E-06 47.8 3.9 64 23-98 190-253 (385)
424 cd00757 ThiF_MoeB_HesA_family 91.2 1 2.2E-05 40.0 7.9 35 23-63 19-54 (228)
425 TIGR01851 argC_other N-acetyl- 91.2 0.39 8.5E-06 44.4 5.2 31 27-61 3-33 (310)
426 TIGR02356 adenyl_thiF thiazole 91.2 0.69 1.5E-05 40.3 6.6 37 21-63 17-54 (202)
427 PF02826 2-Hacid_dh_C: D-isome 91.2 0.38 8.3E-06 40.9 4.9 64 22-99 33-97 (178)
428 PRK00257 erythronate-4-phospha 90.8 0.39 8.4E-06 46.1 5.0 61 23-100 114-175 (381)
429 TIGR00518 alaDH alanine dehydr 90.8 0.23 5E-06 47.6 3.5 71 25-101 167-238 (370)
430 PRK14188 bifunctional 5,10-met 90.7 0.52 1.1E-05 43.5 5.6 53 23-101 156-209 (296)
431 PRK12480 D-lactate dehydrogena 90.6 0.31 6.8E-06 45.9 4.2 60 23-98 144-203 (330)
432 COG2099 CobK Precorrin-6x redu 90.5 2.3 4.9E-05 37.9 9.0 90 25-133 2-93 (257)
433 PLN02735 carbamoyl-phosphate s 90.4 0.87 1.9E-05 50.1 7.9 79 16-99 14-104 (1102)
434 KOG4288 Predicted oxidoreducta 90.4 0.19 4.2E-06 43.8 2.3 37 25-66 2-38 (283)
435 PF02670 DXP_reductoisom: 1-de 90.2 0.38 8.2E-06 38.4 3.6 32 28-62 1-32 (129)
436 PRK06249 2-dehydropantoate 2-r 90.1 0.43 9.2E-06 44.7 4.6 35 24-64 4-38 (313)
437 TIGR02355 moeB molybdopterin s 90.1 1.6 3.5E-05 39.1 8.1 35 24-64 23-58 (240)
438 COG0240 GpsA Glycerol-3-phosph 90.0 0.88 1.9E-05 42.3 6.4 67 26-98 2-76 (329)
439 cd01492 Aos1_SUMO Ubiquitin ac 90.0 1.5 3.2E-05 38.1 7.5 38 21-64 17-55 (197)
440 PRK06932 glycerate dehydrogena 89.9 0.58 1.3E-05 43.8 5.3 61 22-100 144-205 (314)
441 cd01079 NAD_bind_m-THF_DH NAD 89.8 1 2.3E-05 38.6 6.2 76 23-103 60-136 (197)
442 PRK06444 prephenate dehydrogen 89.8 0.36 7.8E-06 41.8 3.5 28 26-58 1-28 (197)
443 PRK05690 molybdopterin biosynt 89.8 1.6 3.5E-05 39.2 7.9 34 24-63 31-65 (245)
444 KOG1198 Zinc-binding oxidoredu 89.5 0.49 1.1E-05 44.9 4.5 76 22-103 155-235 (347)
445 PRK05597 molybdopterin biosynt 89.5 1.3 2.9E-05 42.2 7.4 37 22-64 25-62 (355)
446 PRK11064 wecC UDP-N-acetyl-D-m 89.5 0.4 8.6E-06 46.8 4.0 34 26-65 4-37 (415)
447 PRK06728 aspartate-semialdehyd 89.4 0.53 1.1E-05 44.5 4.5 23 25-47 5-27 (347)
448 PRK11790 D-3-phosphoglycerate 89.3 0.49 1.1E-05 46.0 4.5 62 23-100 149-211 (409)
449 PF01488 Shikimate_DH: Shikima 89.3 0.5 1.1E-05 38.2 3.9 68 22-100 9-82 (135)
450 PRK08328 hypothetical protein; 89.2 2.2 4.8E-05 38.0 8.3 36 22-63 24-60 (231)
451 cd05212 NAD_bind_m-THF_DH_Cycl 89.2 1.3 2.8E-05 36.0 6.1 54 23-101 26-79 (140)
452 TIGR01035 hemA glutamyl-tRNA r 89.1 0.23 5E-06 48.5 2.1 67 23-100 178-247 (417)
453 PF13241 NAD_binding_7: Putati 89.1 0.83 1.8E-05 34.9 4.8 35 24-64 6-40 (103)
454 cd01065 NAD_bind_Shikimate_DH 89.1 0.55 1.2E-05 38.7 4.1 36 24-65 18-54 (155)
455 PRK13581 D-3-phosphoglycerate 89.0 0.64 1.4E-05 46.9 5.1 64 23-100 138-202 (526)
456 PLN03139 formate dehydrogenase 89.0 0.45 9.7E-06 45.8 3.8 64 22-98 196-260 (386)
457 PRK06719 precorrin-2 dehydroge 88.9 0.68 1.5E-05 38.5 4.5 32 25-62 13-44 (157)
458 KOG0023 Alcohol dehydrogenase, 88.9 0.62 1.3E-05 42.9 4.5 73 24-102 181-255 (360)
459 PRK00045 hemA glutamyl-tRNA re 88.9 0.23 5E-06 48.6 1.9 69 23-100 180-249 (423)
460 PF02737 3HCDH_N: 3-hydroxyacy 88.8 0.38 8.2E-06 41.1 3.0 33 27-65 1-33 (180)
461 PF03807 F420_oxidored: NADP o 88.8 0.49 1.1E-05 35.4 3.3 62 27-100 1-68 (96)
462 PLN02306 hydroxypyruvate reduc 88.7 0.58 1.3E-05 45.1 4.4 36 23-64 163-199 (386)
463 cd01483 E1_enzyme_family Super 88.6 2.9 6.3E-05 33.9 8.1 32 27-64 1-33 (143)
464 PRK00258 aroE shikimate 5-dehy 88.3 0.67 1.5E-05 42.6 4.4 37 23-65 121-158 (278)
465 cd05213 NAD_bind_Glutamyl_tRNA 88.2 0.25 5.4E-06 46.2 1.6 69 24-100 177-245 (311)
466 COG1004 Ugd Predicted UDP-gluc 88.2 0.5 1.1E-05 44.9 3.5 71 26-102 1-85 (414)
467 PF02882 THF_DHG_CYH_C: Tetrah 88.2 1.1 2.3E-05 37.4 5.1 55 23-102 34-88 (160)
468 PRK15409 bifunctional glyoxyla 88.0 0.99 2.1E-05 42.4 5.4 64 23-100 143-208 (323)
469 TIGR01327 PGDH D-3-phosphoglyc 88.0 0.68 1.5E-05 46.7 4.6 65 23-100 136-201 (525)
470 PRK05600 thiamine biosynthesis 87.9 1.8 4E-05 41.4 7.3 37 21-63 37-74 (370)
471 PRK06718 precorrin-2 dehydroge 87.9 0.71 1.5E-05 40.2 4.1 35 24-64 9-43 (202)
472 PRK12409 D-amino acid dehydrog 87.8 0.66 1.4E-05 45.1 4.4 33 26-64 2-34 (410)
473 cd00755 YgdL_like Family of ac 87.8 2.7 5.9E-05 37.4 7.8 34 24-63 10-44 (231)
474 cd08259 Zn_ADH5 Alcohol dehydr 87.7 0.73 1.6E-05 43.1 4.4 37 23-64 161-197 (332)
475 PRK11559 garR tartronate semia 87.7 0.59 1.3E-05 43.3 3.8 36 24-65 1-36 (296)
476 PRK06522 2-dehydropantoate 2-r 87.7 0.65 1.4E-05 43.1 4.0 33 26-64 1-33 (304)
477 PRK14179 bifunctional 5,10-met 87.6 1 2.2E-05 41.2 5.1 55 23-102 156-210 (284)
478 PF03446 NAD_binding_2: NAD bi 87.5 0.67 1.5E-05 38.8 3.7 62 26-100 2-64 (163)
479 PLN02696 1-deoxy-D-xylulose-5- 87.5 1 2.2E-05 43.8 5.2 36 25-63 57-92 (454)
480 TIGR00872 gnd_rel 6-phosphoglu 87.4 0.4 8.6E-06 44.6 2.4 65 26-100 1-66 (298)
481 COG0287 TyrA Prephenate dehydr 87.3 0.59 1.3E-05 42.9 3.4 35 25-65 3-37 (279)
482 PRK08040 putative semialdehyde 87.3 0.76 1.6E-05 43.3 4.2 37 24-62 3-39 (336)
483 COG1179 Dinucleotide-utilizing 87.3 2.1 4.5E-05 37.9 6.5 34 25-64 30-64 (263)
484 PLN02775 Probable dihydrodipic 87.2 4.7 0.0001 36.9 9.0 40 20-64 6-46 (286)
485 PLN00203 glutamyl-tRNA reducta 87.2 0.29 6.3E-06 49.0 1.4 68 24-100 265-336 (519)
486 PRK08644 thiamine biosynthesis 87.2 2.8 6.1E-05 36.8 7.5 34 24-63 27-61 (212)
487 PRK14189 bifunctional 5,10-met 87.2 1.4 3E-05 40.4 5.6 55 23-102 156-210 (285)
488 PRK02472 murD UDP-N-acetylmura 87.1 0.65 1.4E-05 45.8 3.9 34 25-64 5-38 (447)
489 PRK15116 sulfur acceptor prote 87.1 3.9 8.5E-05 37.2 8.5 35 24-64 29-64 (268)
490 PRK07417 arogenate dehydrogena 87.1 0.62 1.3E-05 42.8 3.4 34 26-65 1-34 (279)
491 TIGR01470 cysG_Nterm siroheme 86.9 1 2.2E-05 39.3 4.5 52 25-82 9-63 (205)
492 PRK06545 prephenate dehydrogen 86.8 0.45 9.6E-06 45.5 2.4 34 26-65 1-34 (359)
493 PRK08605 D-lactate dehydrogena 86.8 1 2.2E-05 42.6 4.7 63 23-99 144-206 (332)
494 smart00859 Semialdhyde_dh Semi 86.7 0.97 2.1E-05 35.6 4.0 30 27-60 1-30 (122)
495 PRK08818 prephenate dehydrogen 86.6 0.88 1.9E-05 43.5 4.2 35 25-63 4-38 (370)
496 PRK09260 3-hydroxybutyryl-CoA 86.2 0.73 1.6E-05 42.6 3.5 34 26-65 2-35 (288)
497 PF01210 NAD_Gly3P_dh_N: NAD-d 86.2 0.79 1.7E-05 38.1 3.3 32 27-64 1-32 (157)
498 COG0136 Asd Aspartate-semialde 86.2 0.67 1.4E-05 43.2 3.1 22 26-47 2-23 (334)
499 PRK11880 pyrroline-5-carboxyla 86.1 0.8 1.7E-05 41.7 3.7 36 24-65 1-39 (267)
500 TIGR00243 Dxr 1-deoxy-D-xylulo 86.0 0.87 1.9E-05 43.3 3.8 35 26-63 2-36 (389)
No 1
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.6e-39 Score=281.41 Aligned_cols=304 Identities=17% Similarity=0.171 Sum_probs=227.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-------CCCCCCCeeEEEecCCChHHHHHHHhc--CCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-------NWNADHLVEYVQCDVSDPEETQAKLSQ--LTD 96 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~ 96 (396)
|++|||||+||||++++++++++. ..++|++++.-.-. .....++..++++||.|.+.+..+++. .|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 579999999999999999999842 12468888875421 123457899999999999999999985 788
Q ss_pred eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047 97 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 97 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~ 174 (396)
|+|+|+-+++..+ .|..+.++|+.||.+||+|+++.... .+|+.+|+.- +||.....+..++|++|..|.
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDE-------VYG~l~~~~~~FtE~tp~~Ps 149 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDE-------VYGDLGLDDDAFTETTPYNPS 149 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEecccc-------ccccccCCCCCcccCCCCCCC
Confidence 9999998877654 78889999999999999999998532 4566665544 555543334478999999998
Q ss_pred CCcchhH----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 016047 175 PNFYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS 250 (396)
Q Consensus 175 ~~~~y~~----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~ 250 (396)
++ |++ ..++..++.+.+|++++|.|+++-|| |.....-+.++.. +..-.|+|+++.|++.+.+.|+++.
T Consensus 150 SP--YSASKAasD~lVray~~TYglp~~ItrcSNNYG--PyqfpEKlIP~~I---~nal~g~~lpvYGdG~~iRDWl~Ve 222 (340)
T COG1088 150 SP--YSASKAASDLLVRAYVRTYGLPATITRCSNNYG--PYQFPEKLIPLMI---INALLGKPLPVYGDGLQIRDWLYVE 222 (340)
T ss_pred CC--cchhhhhHHHHHHHHHHHcCCceEEecCCCCcC--CCcCchhhhHHHH---HHHHcCCCCceecCCcceeeeEEeH
Confidence 77 553 34444444488999999999999999 5544332333322 1223588999999999999999999
Q ss_pred cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047 251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE 330 (396)
Q Consensus 251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (396)
|- |+++ ++....+..|++|||+++...+-.|+++.|.+.+|...+... ++-.++.+
T Consensus 223 Dh---~~ai-~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~-------------~li~~V~D------- 278 (340)
T COG1088 223 DH---CRAI-DLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR-------------DLITFVED------- 278 (340)
T ss_pred hH---HHHH-HHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchh-------------hheEeccC-------
Confidence 97 5553 344455677999999999999999999999999997644200 00011110
Q ss_pred HHHHhCCCcccccccccceeehhhhcCc-ccccchhhHh-hcCCCccccCHHHHHHHHHHHhhCCC
Q 016047 331 IVRENQLQPTRLDEVGAWWFVDLVLTGE-AKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFKI 394 (396)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~~~~~~~ 394 (396)
. -..+ ++.+|.+|++ +|||.|+.++++||+++++||.+..|
T Consensus 279 --------R---------------pGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 279 --------R---------------PGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred --------C---------------CCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 0 0112 6778999975 68999999999999999999998765
No 2
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.5e-38 Score=276.05 Aligned_cols=296 Identities=17% Similarity=0.139 Sum_probs=218.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCC--eeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL--VEYVQCDVSDPEETQAKLSQ--LTDVTHIF 101 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~--v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a 101 (396)
++||||||+||||||.+.+|++ .||+|+++++-.......-.. ++++++|+.|.+.+++.|+. +|.|+|+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~-----~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLK-----TGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHH-----CCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 5899999999999999999999 899999999865433111122 68999999999999999876 56699999
Q ss_pred EeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047 102 YVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179 (396)
Q Consensus 102 ~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y 179 (396)
+...+..+ .|.++++.|+.||.+|+++|++++ +++++|.||..+| |. +...|++|+.|..|..+|+.
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g--v~~~vFSStAavY-------G~--p~~~PI~E~~~~~p~NPYG~ 144 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG--VKKFIFSSTAAVY-------GE--PTTSPISETSPLAPINPYGR 144 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhC--CCEEEEecchhhc-------CC--CCCcccCCCCCCCCCCcchh
Confidence 98776554 789999999999999999999986 8999998876655 43 24679999999888767332
Q ss_pred h---HHHHHHHHhhcCCCeeEEEEcCCceeecCCCC-------cchhHHHHHHHHHHhhhcCCCceecC------Ccccc
Q 016047 180 T---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPG------TKAAW 243 (396)
Q Consensus 180 ~---~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~~~ 243 (396)
+ .|++|..+. +.++++++++|..++.|..|.. ..+...++....++.+. ..+.+.| ++.-.
T Consensus 145 sKlm~E~iL~d~~-~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r--~~l~ifG~DY~T~DGT~i 221 (329)
T COG1087 145 SKLMSEEILRDAA-KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKR--DKLFIFGDDYDTKDGTCI 221 (329)
T ss_pred HHHHHHHHHHHHH-HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCC--ceeEEeCCCCCCCCCCee
Confidence 2 377777776 6778999999999999986642 11334444333332221 1122222 23344
Q ss_pred ceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047 244 ECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 321 (396)
Q Consensus 244 ~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (396)
++++|+.|. |.+++.+... ......+||+++|...|+.|+++.+.+..|.+.+....
T Consensus 222 RDYIHV~DL---A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~------------------ 280 (329)
T COG1087 222 RDYIHVDDL---ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA------------------ 280 (329)
T ss_pred eeeeehhHH---HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC------------------
Confidence 566666664 7777766532 22233699999999999999999999999977543100
Q ss_pred ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccc-cCHHHHHHHHHHHh
Q 016047 322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVK 390 (396)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~ 390 (396)
.+ ++.+. ..++.|.+||++ |||+|++ +++++++++.+|..
T Consensus 281 -----------~R---R~GDp---------------a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 281 -----------PR---RAGDP---------------AILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred -----------CC---CCCCC---------------ceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence 00 11110 156789999986 6999999 99999999999987
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=2e-37 Score=294.70 Aligned_cols=301 Identities=16% Similarity=0.130 Sum_probs=212.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------------CCCCCeeEEEecCCChHHHHHHHh
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
+|+|||||||||||++|+++|++ +|++|++++|...... ....+++++.+|+.|.+.+.++++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLF-----LNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 47999999999999999999999 8999999998643210 001357889999999999999999
Q ss_pred cCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 93 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
++|.|+|+|+...... .++...+++|+.||.|++++|++.+ +++++++||..+| |.. .+.+..|+++
T Consensus 90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~e~~~ 158 (348)
T PRK15181 90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH--VSSFTYAASSSTY-------GDH--PDLPKIEERI 158 (348)
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeechHhh-------CCC--CCCCCCCCCC
Confidence 9999999998644322 2566789999999999999999864 7789988765544 431 1345667766
Q ss_pred CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--c-hhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047 171 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--M-NLVGALCVYAAVCKHEGIPLRFPGTKAA 242 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 242 (396)
..|... |+. |+++..+. ++.+++++++||++|||++.... . .+...+.. .+ ..+.++.+.|++.+
T Consensus 159 ~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~--~~--~~~~~i~~~g~g~~ 231 (348)
T PRK15181 159 GRPLSP--YAVTKYVNELYADVFA-RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWIL--SL--LKDEPIYINGDGST 231 (348)
T ss_pred CCCCCh--hhHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCcCCCCCCccccCHHHHHH--HH--HcCCCcEEeCCCCc
Confidence 555443 664 55555554 56789999999999999643211 1 12222211 11 12556677788888
Q ss_pred cceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047 243 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 320 (396)
Q Consensus 243 ~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
.++++|+.|+ |.+++.++.... ..+++|||++++.+|++|+++.+.+.++....... ...+
T Consensus 232 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~-----------~~~~--- 294 (348)
T PRK15181 232 SRDFCYIENV---IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS-----------RAEP--- 294 (348)
T ss_pred eEeeEEHHHH---HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCccccccc-----------CCCc---
Confidence 8888888887 777666554322 35789999999999999999999998874321100 0000
Q ss_pred hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
.+ .+..... .....+|++|+++ +||+|+++++|+|+++++|++..
T Consensus 295 -------------~~--~~~~~~~------------~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 295 -------------IY--KDFRDGD------------VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred -------------cc--CCCCCCc------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0000000 0134579999987 69999999999999999999764
No 4
>PLN02427 UDP-apiose/xylose synthase
Probab=100.00 E-value=2e-34 Score=278.16 Aligned_cols=328 Identities=14% Similarity=0.153 Sum_probs=210.5
Q ss_pred cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC--C------CCCCCeeEEEecCCCh
Q 016047 14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--W------NADHLVEYVQCDVSDP 84 (396)
Q Consensus 14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~--~------~~~~~v~~~~~Dl~d~ 84 (396)
..++++++... |+|||||||||||++|+++|++ + |++|++++|.+... . ....+++++.+|+.|.
T Consensus 4 ~~~~~~~~~~~-~~VlVTGgtGfIGs~lv~~L~~-----~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~ 77 (386)
T PLN02427 4 RLDLDGKPIKP-LTICMIGAGGFIGSHLCEKLMT-----ETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD 77 (386)
T ss_pred hhcCCCCcccC-cEEEEECCcchHHHHHHHHHHh-----cCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh
Confidence 34566666665 6899999999999999999998 5 69999999865321 0 0124689999999999
Q ss_pred HHHHHHHhcCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047 85 EETQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 85 ~~~~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+.+.++++++|.|+|+|+..... ..++.+.+..|+.++.+++++|++.+ ++|+++||..+|+.....+ .+.+
T Consensus 78 ~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~~~~---~~e~ 151 (386)
T PLN02427 78 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSF---LPKD 151 (386)
T ss_pred HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCcCCC---CCcc
Confidence 99999999999999999854321 12445667889999999999998753 5788888777775421110 0112
Q ss_pred CCc---------cCCCCCC---C--CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC------cchhH
Q 016047 163 PPF---------TEDMPRL---D--APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS------LMNLV 217 (396)
Q Consensus 163 ~p~---------~E~~p~~---~--~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~------~~~~~ 217 (396)
.|. .|+.+.. + .+...|+. |+++..+. +.++++++++||++|||+.... .....
T Consensus 152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~ 230 (386)
T PLN02427 152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 230 (386)
T ss_pred cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHH-hhcCCceEEecccceeCCCCCcccccccccccc
Confidence 222 2221111 1 11234664 55555544 5678999999999999954210 00011
Q ss_pred HHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCceeeecCC-CeeeHHHHHHHHHHHhC
Q 016047 218 GALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG-DVFKWKHLWKVLAEQFG 295 (396)
Q Consensus 218 ~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~-~~g~~~ni~~~-~~~s~~el~~~l~~~~g 295 (396)
..+..........+.++.+.|++.+.++++|+.|+ |++++.++.++. ..+++||++++ ..+|++|+++.+.+.+|
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dv---a~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDA---IEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA 307 (386)
T ss_pred chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHH---HHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhc
Confidence 11111110011135566667777776777777776 777777665543 45789999987 58999999999999998
Q ss_pred CCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCc
Q 016047 296 IEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSG 374 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p 374 (396)
......... ...+.. ....+.. .. +.+. .....|++|+++ +||+|
T Consensus 308 ~~~~~~~~~-------~~~~~~--------------------~~~~~~~-~~--~~~~----~~~~~d~~k~~~~lGw~p 353 (386)
T PLN02427 308 KVSGEPALE-------EPTVDV--------------------SSKEFYG-EG--YDDS----DKRIPDMTIINKQLGWNP 353 (386)
T ss_pred ccccccccc-------cccccc--------------------CcccccC-cc--ccch----hhccCCHHHHHHhcCCCc
Confidence 532110000 000000 0000000 00 0000 144579999987 69999
Q ss_pred cccCHHHHHHHHHHHhh
Q 016047 375 FRNSKNSFITWIDKVKG 391 (396)
Q Consensus 375 ~~~~~~~~~~~~~~~~~ 391 (396)
+++++++|+++++|+++
T Consensus 354 ~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 354 KTSLWDLLESTLTYQHK 370 (386)
T ss_pred CccHHHHHHHHHHHHHH
Confidence 99999999999999864
No 5
>PLN02214 cinnamoyl-CoA reductase
Probab=100.00 E-value=4.4e-34 Score=270.88 Aligned_cols=301 Identities=15% Similarity=0.148 Sum_probs=204.0
Q ss_pred cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHH
Q 016047 20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKL 91 (396)
Q Consensus 20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~ 91 (396)
..-.++++|||||||||||++|+++|++ +||+|++++|+.... .. ...+++++.+|++|++++.+++
T Consensus 5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (342)
T PLN02214 5 VASPAGKTVCVTGAGGYIASWIVKILLE-----RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI 79 (342)
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence 3344567999999999999999999999 899999999975421 11 1135788999999999999999
Q ss_pred hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccc-eeecccccccccCCCCCCCccCCCC
Q 016047 92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+++|.|+|+|+.. ..++...+++|+.|+.+++++|++.+ +++++++||. .+|+... .....+++|+++
T Consensus 80 ~~~d~Vih~A~~~---~~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~------~~~~~~~~E~~~ 148 (342)
T PLN02214 80 DGCDGVFHTASPV---TDDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPN------RDPEAVVDESCW 148 (342)
T ss_pred hcCCEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCC------CCCCcccCcccC
Confidence 9999999998743 34567889999999999999999864 6788888764 3453210 001234677642
Q ss_pred CC---C-CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047 171 RL---D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 241 (396)
Q Consensus 171 ~~---~-~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 241 (396)
.. + .+...|+. |+++..+. ++.+++++++||++|||+......+.. +.....+. .+.... .+ .
T Consensus 149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~-~~~g~~~v~lRp~~vyGp~~~~~~~~~--~~~~~~~~--~g~~~~-~~--~ 220 (342)
T PLN02214 149 SDLDFCKNTKNWYCYGKMVAEQAAWETA-KEKGVDLVVLNPVLVLGPPLQPTINAS--LYHVLKYL--TGSAKT-YA--N 220 (342)
T ss_pred CChhhccccccHHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCch--HHHHHHHH--cCCccc-CC--C
Confidence 11 1 12233654 66666654 567999999999999995432111111 11111111 122222 22 2
Q ss_pred ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047 242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 321 (396)
Q Consensus 242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (396)
+.+.++|+.|+ |++++.++..+. .++.||+++ ...+++|+++.+++.++....+ ...
T Consensus 221 ~~~~~i~V~Dv---a~a~~~al~~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~--------------~~~---- 277 (342)
T PLN02214 221 LTQAYVDVRDV---ALAHVLVYEAPS-ASGRYLLAE-SARHRGEVVEILAKLFPEYPLP--------------TKC---- 277 (342)
T ss_pred CCcCeeEHHHH---HHHHHHHHhCcc-cCCcEEEec-CCCCHHHHHHHHHHHCCCCCCC--------------CCC----
Confidence 34567777666 788887776543 356899987 5789999999999998531111 000
Q ss_pred ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047 322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396 (396)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (396)
....+.. .....+|++|+++|||+| ++++|+|+++++|+++.|++|
T Consensus 278 -------------~~~~~~~---------------~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 278 -------------KDEKNPR---------------AKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred -------------ccccCCC---------------CCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence 0000000 012347999999999998 699999999999999999975
No 6
>PLN02572 UDP-sulfoquinovose synthase
Probab=100.00 E-value=4.8e-34 Score=278.19 Aligned_cols=306 Identities=19% Similarity=0.110 Sum_probs=201.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCeeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYV 77 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~ 77 (396)
..+.|+|||||||||||++|+++|++ +|++|++++|..... . ....+++++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~-----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v 118 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSK-----RGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY 118 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence 44568999999999999999999999 899999987532100 0 001258899
Q ss_pred EecCCChHHHHHHHhc--CCCeeEEEEeccCCCc--c---HHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEeccceeec
Q 016047 78 QCDVSDPEETQAKLSQ--LTDVTHIFYVTWTNRS--T---EAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYL 149 (396)
Q Consensus 78 ~~Dl~d~~~~~~~~~~--~~~V~h~a~~~~~~~~--~---~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~ 149 (396)
.+|++|++.+.+++++ +|.|+|+|+....... + ....+++|+.||.+++++|++.+ ++ +++++||..+|+
T Consensus 119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~vYG 196 (442)
T PLN02572 119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMGEYG 196 (442)
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecceecC
Confidence 9999999999999985 7889999865332211 1 23456899999999999999875 43 788777766665
Q ss_pred ccccccccCCCCCCCcc------CCC---CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-
Q 016047 150 GPFEAFGKIKPYDPPFT------EDM---PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM- 214 (396)
Q Consensus 150 ss~~~~g~~~~~~~p~~------E~~---p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~- 214 (396)
.+. .+. .+.+++ |++ |..| ...|+. |.++..+. +++|++++++||++|||++.....
T Consensus 197 ~~~---~~~--~E~~i~~~~~~~e~~~~~~~~P--~s~Yg~SK~a~E~l~~~~~-~~~gl~~v~lR~~~vyGp~~~~~~~ 268 (442)
T PLN02572 197 TPN---IDI--EEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVRTDETMM 268 (442)
T ss_pred CCC---CCC--cccccccccccccccccCCCCC--CCcchhHHHHHHHHHHHHH-HhcCCCEEEEecccccCCCCccccc
Confidence 321 000 111121 232 2233 233664 55555544 677999999999999995422100
Q ss_pred -----------h-hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--ceeeecCCCe
Q 016047 215 -----------N-LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNCNNGDV 280 (396)
Q Consensus 215 -----------~-~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g--~~~ni~~~~~ 280 (396)
+ +...+..++. ....+.++.+.|++.+.++++|+.|+ +.+++.++......| .+||+++ ..
T Consensus 269 ~~~li~~~~~~~~~~~~i~~~~~-~~~~g~~i~v~g~G~~~Rdfi~V~Dv---a~a~~~al~~~~~~g~~~i~Nigs-~~ 343 (442)
T PLN02572 269 DEELINRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGFLDIRDT---VRCIEIAIANPAKPGEFRVFNQFT-EQ 343 (442)
T ss_pred ccccccccCcccchhhHHHHHHH-HHhcCCCceecCCCCEEECeEEHHHH---HHHHHHHHhChhhcCceeEEEeCC-Cc
Confidence 0 0011111111 11125666777888888888888887 677776665432334 5899976 67
Q ss_pred eeHHHHHHHHHHH---hCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcC
Q 016047 281 FKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTG 357 (396)
Q Consensus 281 ~s~~el~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 357 (396)
+|++|+++.+.+. +|.+..... .+. +... . ..
T Consensus 344 ~si~el~~~i~~~~~~~g~~~~~~~----------~p~-------------------------~~~~-~---------~~ 378 (442)
T PLN02572 344 FSVNELAKLVTKAGEKLGLDVEVIS----------VPN-------------------------PRVE-A---------EE 378 (442)
T ss_pred eeHHHHHHHHHHHHHhhCCCCCeee----------CCC-------------------------Cccc-c---------cc
Confidence 9999999999998 775532100 000 0000 0 00
Q ss_pred cccccchhhHhhcCCCccc---cCHHHHHHHHHHHhhC
Q 016047 358 EAKLASMNKSKEHGFSGFR---NSKNSFITWIDKVKGF 392 (396)
Q Consensus 358 ~~~~~d~~k~~~lG~~p~~---~~~~~~~~~~~~~~~~ 392 (396)
.....|++|+++|||+|++ ++++++.++++||++.
T Consensus 379 ~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~ 416 (442)
T PLN02572 379 HYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR 416 (442)
T ss_pred cccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence 0234699999999999999 9999999999999854
No 7
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=100.00 E-value=3.8e-34 Score=277.71 Aligned_cols=298 Identities=15% Similarity=0.143 Sum_probs=205.8
Q ss_pred cccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChH
Q 016047 12 ARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPE 85 (396)
Q Consensus 12 ~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~ 85 (396)
+.|.++.=++..| +|||||||||||++|+++|++ +|++|++++|..... ....++++++.+|+.+..
T Consensus 109 ~~~~~~~~~~~~m--kILVTGatGFIGs~Lv~~Ll~-----~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~ 181 (436)
T PLN02166 109 TGRVPVGIGRKRL--RIVVTGGAGFVGSHLVDKLIG-----RGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI 181 (436)
T ss_pred cCCCCcccccCCC--EEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc
Confidence 3455544444444 899999999999999999999 899999999853211 112246788899987653
Q ss_pred HHHHHHhcCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047 86 ETQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 86 ~~~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
+.++|.|+|+|+..... ..++.+.+++|+.||.+|+++|++.+ . +++++||..+| |.. ...
T Consensus 182 -----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~-r~V~~SS~~VY-------g~~--~~~ 244 (436)
T PLN02166 182 -----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--A-RFLLTSTSEVY-------GDP--LEH 244 (436)
T ss_pred -----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECcHHHh-------CCC--CCC
Confidence 46799999999864432 13577889999999999999999875 3 67777765544 421 134
Q ss_pred CccCCC-----CCCCCCCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-chhHHHHHHHHHHhhhcCC
Q 016047 164 PFTEDM-----PRLDAPNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGI 232 (396)
Q Consensus 164 p~~E~~-----p~~~~~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~ 232 (396)
+.+|+. |..|... |+ .|+++..+. +..+++++++||++|||+..... ......+.. .+. .+.
T Consensus 245 p~~E~~~~~~~p~~p~s~--Yg~SK~~aE~~~~~y~-~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~--~~l--~~~ 317 (436)
T PLN02166 245 PQKETYWGNVNPIGERSC--YDEGKRTAETLAMDYH-RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA--QTI--RKQ 317 (436)
T ss_pred CCCccccccCCCCCCCCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEEccccCCCCCCCccchHHHHHH--HHh--cCC
Confidence 566653 3333333 55 366776665 56789999999999999542211 112222211 111 245
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 016047 233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT 312 (396)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~ 312 (396)
++.+.|++.+.+.++|+.|+ +++++.++.. ..+++|||+++..+|++|+++.+++.+|.+.....
T Consensus 318 ~i~v~g~g~~~rdfi~V~Dv---a~ai~~~~~~--~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~---------- 382 (436)
T PLN02166 318 PMTVYGDGKQTRSFQYVSDL---VDGLVALMEG--EHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEF---------- 382 (436)
T ss_pred CcEEeCCCCeEEeeEEHHHH---HHHHHHHHhc--CCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeee----------
Confidence 66677888888888887776 6777666643 23568999999999999999999999986532100
Q ss_pred ccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 313 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
. +..-.. . .....|++|+++ +||+|+++++++|+++++|+++
T Consensus 383 -----------------------~--p~~~~~--~----------~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~ 425 (436)
T PLN02166 383 -----------------------K--PNTADD--P----------HKRKPDISKAKELLNWEPKISLREGLPLMVSDFRN 425 (436)
T ss_pred -----------------------C--CCCCCC--c----------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 0 000000 0 023479999997 5999999999999999999976
Q ss_pred C
Q 016047 392 F 392 (396)
Q Consensus 392 ~ 392 (396)
+
T Consensus 426 ~ 426 (436)
T PLN02166 426 R 426 (436)
T ss_pred H
Confidence 4
No 8
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=100.00 E-value=1.1e-33 Score=270.49 Aligned_cols=297 Identities=13% Similarity=0.059 Sum_probs=207.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC-CCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
.+|+|||||||||||++|+++|++ .||+|++++|........ ...++++.+|+.|.+.+.+++.++|.|+|+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~-----~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKA-----EGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHh-----CCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 458999999999999999999999 899999999865322111 12357889999999999888899999999987
Q ss_pred eccC---CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC--CCCCCCCc
Q 016047 103 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRLDAPNF 177 (396)
Q Consensus 103 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~--p~~~~~~~ 177 (396)
.... ...++......|+.++.||+++|++.+ +++|+++||..+|+... . .....++.|+. |..|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~--vk~~V~~SS~~vYg~~~-~----~~~~~~~~E~~~~p~~p~s~- 166 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARING--VKRFFYASSACIYPEFK-Q----LETNVSLKESDAWPAEPQDA- 166 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhC--CCEEEEeCchhhcCCcc-c----cCcCCCcCcccCCCCCCCCH-
Confidence 5321 122345567889999999999998764 77899888766664321 0 00123466655 4444333
Q ss_pred chhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--chh-HHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 016047 178 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA 249 (396)
Q Consensus 178 ~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~ 249 (396)
|+. |+++..+. ++.+++++++||++|||+..... ... ...+.. ..+ + .+.++.++|++.+.+.++|+
T Consensus 167 -Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~-~~~-~-~~~~i~~~g~g~~~r~~i~v 241 (370)
T PLN02695 167 -YGLEKLATEELCKHYT-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR-KAL-T-STDEFEMWGDGKQTRSFTFI 241 (370)
T ss_pred -HHHHHHHHHHHHHHHH-HHhCCCEEEEEECCccCCCCCccccccccHHHHHH-HHH-c-CCCCeEEeCCCCeEEeEEeH
Confidence 653 66666654 66799999999999999532111 111 112211 111 1 23566778888888888888
Q ss_pred ccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHH
Q 016047 250 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE 329 (396)
Q Consensus 250 ~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (396)
.|+ +++++.++..+ .+++||++++..+|++|+++.+.+.+|.+..... .+
T Consensus 242 ~D~---a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~------------- 291 (370)
T PLN02695 242 DEC---VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH------------IP------------- 291 (370)
T ss_pred HHH---HHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee------------cC-------------
Confidence 776 66766655432 3678999999999999999999999886432100 00
Q ss_pred HHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 330 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 330 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
.+... . ....|++|+++ +||+|+++++++|+++++|+++
T Consensus 292 --------~~~~~---~------------~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 292 --------GPEGV---R------------GRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred --------CCCCc---c------------ccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 0 12369999996 6999999999999999999875
No 9
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=268.31 Aligned_cols=311 Identities=13% Similarity=0.236 Sum_probs=206.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--CCCCCCCeeEEEecCC-ChHHHHHHHhcCCCeeEEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~~~V~h~a~ 102 (396)
|+|||||||||||++|+++|++. .||+|++++|+... ......+++++.+|+. +.+.+.++++++|.|+|+|+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~----~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILET----TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhC----CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 58999999999999999999972 37999999986532 1222346899999998 67788888899999999988
Q ss_pred eccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC---C--CC
Q 016047 103 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D--AP 175 (396)
Q Consensus 103 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~---~--~~ 175 (396)
..... ..++...+++|+.++.+++++|++.+ ++++++||..+|+ .. ...+++|+.+.. | .+
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~vyg-------~~--~~~~~~ee~~~~~~~~~~~p 145 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYG-------MC--PDEEFDPEASPLVYGPINKP 145 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecceeec-------cC--CCcCcCccccccccCcCCCc
Confidence 64332 23567788999999999999999853 5788887665553 21 123455554321 1 12
Q ss_pred CcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-------chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047 176 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAAW 243 (396)
Q Consensus 176 ~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 243 (396)
...|+. |+++..+. ++.+++++++||+++||++.... ..+...+ +. ....+.++.+.+++.+.
T Consensus 146 ~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~---~~-~~~~~~~~~~~~~g~~~ 220 (347)
T PRK11908 146 RWIYACSKQLMDRVIWAYG-MEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQF---LG-HIVRGEPISLVDGGSQK 220 (347)
T ss_pred cchHHHHHHHHHHHHHHHH-HHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHH---HH-HHhCCCceEEecCCcee
Confidence 334775 44555544 56789999999999999543211 1111111 11 11135566666777777
Q ss_pred ceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047 244 ECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 320 (396)
Q Consensus 244 ~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
+.++|+.|+ +++++.++.++. ..+++|||+++ ..+|++|+++.+.+.+|..+.. .. .+..+ ++
T Consensus 221 r~~i~v~D~---a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~-~~---------~~~~~-~~ 286 (347)
T PRK11908 221 RAFTDIDDG---IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY-AE---------SAKKV-KL 286 (347)
T ss_pred eccccHHHH---HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc-cc---------ccccc-cc
Confidence 777777776 777777666543 45789999987 4799999999999999854221 00 00000 00
Q ss_pred hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
.. .....+.. ..+ .+. ..+..|++|+++ +||+|+++++++++++++|+++.
T Consensus 287 ~~--------------~~~~~~~~-~~~--~~~----~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 287 VE--------------TTSGAYYG-KGY--QDV----QNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred cc--------------CCchhccC-cCc--chh----ccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 00 00000000 000 000 134568999986 69999999999999999998754
No 10
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=100.00 E-value=2.5e-33 Score=266.41 Aligned_cols=311 Identities=17% Similarity=0.137 Sum_probs=207.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC---------CCCCeeEEEecCCChHHHHHHHh
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN---------ADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~---------~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
|+|||||||||||++|+++|++ .|++|++++|++.. ... ...+++++.+|++|.+.+.++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLE-----KGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHH-----CCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence 5899999999999999999999 89999999997532 000 01358899999999999999998
Q ss_pred c--CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccCCCCCCCccC
Q 016047 93 Q--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE 167 (396)
Q Consensus 93 ~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E 167 (396)
+ +|.|+|+|+...... .++....++|+.||.+++++|++.+. +.++++++||..+| |.. ...+.+|
T Consensus 76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vy-------g~~--~~~~~~E 146 (343)
T TIGR01472 76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELY-------GKV--QEIPQNE 146 (343)
T ss_pred hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhh-------CCC--CCCCCCC
Confidence 6 488999998644322 24566778999999999999998642 23478877765544 432 1346788
Q ss_pred CCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHH-HhhhcCC-CceecCC
Q 016047 168 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGT 239 (396)
Q Consensus 168 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~ 239 (396)
+.|..|.+. |+. |.++..+. ++.++++++.|+.++||+..+. ++. ..+..++. +. .+. +..+.|+
T Consensus 147 ~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~g~ 219 (343)
T TIGR01472 147 TTPFYPRSP--YAAAKLYAHWITVNYR-EAYGLFAVNGILFNHESPRRGE--NFVTRKITRAAAKIK--LGLQEKLYLGN 219 (343)
T ss_pred CCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCceEEEeecccCCCCCCc--cccchHHHHHHHHHH--cCCCCceeeCC
Confidence 887666544 664 55555543 5668999999999999954322 211 11111111 11 233 2345688
Q ss_pred ccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCC---
Q 016047 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK--- 316 (396)
Q Consensus 240 ~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--- 316 (396)
+.+.++++|+.|+ |.+++.++..+ .+++|||+++..+|++|+++.+.+.+|.+..... .++.
T Consensus 220 g~~~rd~i~V~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~ 284 (343)
T TIGR01472 220 LDAKRDWGHAKDY---VEAMWLMLQQD--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKD----------KGINEVG 284 (343)
T ss_pred CccccCceeHHHH---HHHHHHHHhcC--CCccEEecCCCceeHHHHHHHHHHHcCCCccccc----------ccccccc
Confidence 8888888888887 77777666543 2468999999999999999999999986532100 0000
Q ss_pred HHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 317 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
.+..... .. ..+.+... ..+ + .....+|++|+++ +||+|+++++|+|+++++++++
T Consensus 285 ~~~~~~~-------~~--~~~~~~~~---~~~---~----~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 285 RCKETGK-------VH--VEIDPRYF---RPT---E----VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred cccccCc-------ee--EEeCcccc---CCC---c----cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 0000000 00 00000000 000 0 0134579999986 6999999999999999998874
No 11
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=100.00 E-value=2.9e-33 Score=267.30 Aligned_cols=308 Identities=15% Similarity=0.141 Sum_probs=208.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCCCC-C---C---CCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKLSQ--LT 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~~~~~~~~--~~ 95 (396)
++|||||||||||++|+++|++ +|++|++ ++|.... . . ....+++++.+|+.|++++.+++++ +|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 76 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIIN-----ETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD 76 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHH-----cCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence 5899999999999999999998 7887554 4443221 1 0 1123577899999999999998985 78
Q ss_pred CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHccc-------CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047 96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPN-------APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 166 (396)
Q Consensus 96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~-------~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~ 166 (396)
.|+|+|+...... ..+...+++|+.||.+++++|.+. ...+++++++||..+| |.......+++
T Consensus 77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vy-------g~~~~~~~~~~ 149 (355)
T PRK10217 77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVY-------GDLHSTDDFFT 149 (355)
T ss_pred EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhc-------CCCCCCCCCcC
Confidence 8999988654322 256778899999999999999863 1235678877765544 43211245678
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCc
Q 016047 167 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTK 240 (396)
Q Consensus 167 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~ 240 (396)
|+.+..|... |+. |+++..+. ++.+++++++||++||| |+... .+...+.. ....+.++++.|++
T Consensus 150 E~~~~~p~s~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~G--p~~~~~~~~~~~~~----~~~~~~~~~~~g~g 220 (355)
T PRK10217 150 ETTPYAPSSP--YSASKASSDHLVRAWL-RTYGLPTLITNCSNNYG--PYHFPEKLIPLMIL----NALAGKPLPVYGNG 220 (355)
T ss_pred CCCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCeEEEeeeeeeC--CCCCcccHHHHHHH----HHhcCCCceEeCCC
Confidence 8877665444 654 55556554 56789999999999999 44321 22222211 11124566677888
Q ss_pred cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047 241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF 320 (396)
Q Consensus 241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
.+.++++|+.|+ +.+++.++.. ...+++|||++++.+|++|+++.+++.+|...+.. +..+...
T Consensus 221 ~~~~~~i~v~D~---a~a~~~~~~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~------------~~~~~~~ 284 (355)
T PRK10217 221 QQIRDWLYVEDH---ARALYCVATT-GKVGETYNIGGHNERKNLDVVETICELLEELAPNK------------PQGVAHY 284 (355)
T ss_pred CeeeCcCcHHHH---HHHHHHHHhc-CCCCCeEEeCCCCcccHHHHHHHHHHHhccccccc------------ccccccc
Confidence 877777777776 7777666654 44578999999999999999999999998643221 1100000
Q ss_pred hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047 321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK 393 (396)
Q Consensus 321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~ 393 (396)
.. .. .+ .+.... ......+|++|+++ +||+|+++++|+|+++++|++...
T Consensus 285 -~~-------~~-~~--~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~ 335 (355)
T PRK10217 285 -RD-------LI-TF--VADRPG------------HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANE 335 (355)
T ss_pred -cc-------cc-ee--cCCCCC------------CCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence 00 00 00 000000 00134579999975 799999999999999999997653
No 12
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=100.00 E-value=3.8e-33 Score=252.05 Aligned_cols=304 Identities=18% Similarity=0.191 Sum_probs=208.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (396)
+.++|+|||||||||++++++|++ +||.|++.+|++... .. ..+++..+.+||+|+++++.++++|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~-----rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLS-----RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHh-----CCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence 568999999999999999999999 899999999998652 11 2346889999999999999999999
Q ss_pred CCeeEEEEeccCCCc-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047 95 TDVTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 173 (396)
Q Consensus 95 ~~V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~ 173 (396)
|.|||+|+....... ++.++.++++.||.|+|++|++.. .+++++++||...-... ++.......++|+....+
T Consensus 80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~----~~~~~~~~vvdE~~wsd~ 154 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYN----GPNIGENSVVDEESWSDL 154 (327)
T ss_pred CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccC----CcCCCCCcccccccCCcH
Confidence 999999886544333 355899999999999999999975 79999999864432211 111122445666653211
Q ss_pred C----CCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047 174 A----PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 244 (396)
Q Consensus 174 ~----~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 244 (396)
. ....|. .|+..+++. ++.+++.+.+.|+.|+||.-....+... ...+.+.. |..-.++.. +.
T Consensus 155 ~~~~~~~~~Y~~sK~lAEkaAw~fa-~e~~~~lv~inP~lV~GP~l~~~l~~s~--~~~l~~i~--G~~~~~~n~---~~ 226 (327)
T KOG1502|consen 155 DFCRCKKLWYALSKTLAEKAAWEFA-KENGLDLVTINPGLVFGPGLQPSLNSSL--NALLKLIK--GLAETYPNF---WL 226 (327)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHH-HhCCccEEEecCCceECCCcccccchhH--HHHHHHHh--cccccCCCC---ce
Confidence 1 112344 377778776 7779999999999999954322222211 11112222 211122221 12
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324 (396)
Q Consensus 245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
.++|+.| +|.+++.+...+.+.|+ |.+.+ ...++.|+++++.+.+.....+...
T Consensus 227 ~~VdVrD---VA~AHv~a~E~~~a~GR-yic~~-~~~~~~ei~~~l~~~~P~~~ip~~~--------------------- 280 (327)
T KOG1502|consen 227 AFVDVRD---VALAHVLALEKPSAKGR-YICVG-EVVSIKEIADILRELFPDYPIPKKN--------------------- 280 (327)
T ss_pred eeEeHHH---HHHHHHHHHcCcccCce-EEEec-CcccHHHHHHHHHHhCCCCCCCCCC---------------------
Confidence 3455544 59999998888777655 87776 5555999999999987543311000
Q ss_pred hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396 (396)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (396)
. .+... ....+.+|.+|++++|+.-.++++|++.++++++++.|.++
T Consensus 281 -----------~--~~~~~------------~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 281 -----------A--EEHEG------------FLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred -----------C--ccccc------------cccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 0 00000 00023479999999985459999999999999999999874
No 13
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=100.00 E-value=4e-33 Score=285.34 Aligned_cols=314 Identities=16% Similarity=0.212 Sum_probs=211.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHH-HHHHHhcCCCeeEEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTHIF 101 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-~~~~~~~~~~V~h~a 101 (396)
.|+|||||||||||++|+++|++. +||+|++++|.+... .....+++++.+|++|... ++++++++|.|+|+|
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRD----DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC----CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 479999999999999999999972 379999999976432 2223478999999998765 577889999999999
Q ss_pred EeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC---CCC--
Q 016047 102 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LDA-- 174 (396)
Q Consensus 102 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~---~~~-- 174 (396)
+..... ..++...+++|+.++.+++++|++.+ ++++++||..+| |.. ...+++|+.+. .|.
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vy-------g~~--~~~~~~E~~~~~~~~p~~~ 458 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVY-------GMC--TDKYFDEDTSNLIVGPINK 458 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhc-------CCC--CCCCcCccccccccCCCCC
Confidence 865432 22566788999999999999999864 577877765544 431 13467777653 121
Q ss_pred CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-------hhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047 175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-------NLVGALCVYAAVCKHEGIPLRFPGTKAA 242 (396)
Q Consensus 175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 242 (396)
+...|+. |+++..+. +.++++++++||+++||++..+.. .....+ +. ....+.++.+.|++.+
T Consensus 459 p~s~Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~---i~-~~~~~~~i~~~g~g~~ 533 (660)
T PRK08125 459 QRWIYSVSKQLLDRVIWAYG-EKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQL---IL-NLVEGSPIKLVDGGKQ 533 (660)
T ss_pred CccchHHHHHHHHHHHHHHH-HhcCCceEEEEEceeeCCCccccccccccccchHHHH---HH-HhcCCCCeEEeCCCce
Confidence 2234664 55555554 567899999999999995432110 111111 11 1112566667788888
Q ss_pred cceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047 243 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE 319 (396)
Q Consensus 243 ~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 319 (396)
.++++|+.|+ |.+++.++.+.. ..+++||+++++ .+|++|+++.+.+.+|.+..... ++...
T Consensus 534 ~rd~i~v~Dv---a~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~------------~~~~~ 598 (660)
T PRK08125 534 KRCFTDIRDG---IEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDH------------FPPFA 598 (660)
T ss_pred eeceeeHHHH---HHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccccc------------CCccc
Confidence 8888888776 777766665432 357899999985 79999999999999986432110 10000
Q ss_pred HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047 320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI 394 (396)
Q Consensus 320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 394 (396)
.... ........ ..+ .+. ....+|++|+++ |||+|+++++++|+++++|+++..-
T Consensus 599 ~~~~-------------~~~~~~~~-~~~--~~~----~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 599 GFRV-------------VESSSYYG-KGY--QDV----EHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred cccc-------------cccccccc-ccc--ccc----cccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence 0000 00000000 000 000 134579999996 6999999999999999999998654
No 14
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=100.00 E-value=5.6e-33 Score=263.66 Aligned_cols=300 Identities=15% Similarity=0.128 Sum_probs=207.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC--------CCCCeeEEEecCCChHHHHH
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN--------ADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~--------~~~~v~~~~~Dl~d~~~~~~ 89 (396)
+..+++|||||||||||++|+++|++ +|++|++++|++.. ... ...+++++.+|++|.+.+.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLS-----KGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence 44567999999999999999999999 89999999987532 100 11357899999999999998
Q ss_pred HHhc--CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEeccceeecccccccccCCCCC
Q 016047 90 KLSQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 90 ~~~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
++.. +|.|+|+|+...... .++...+++|+.|+.+++++|++.+.. +++++++||.. +||.. .
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-------vyg~~---~ 147 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-------MYGST---P 147 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-------HhCCC---C
Confidence 8886 488999988643321 245667799999999999999887421 34777776544 45532 2
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHH-HHHHHH-HhhhcCCCc-
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGIPL- 234 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~~~- 234 (396)
.+++|+.|..|... |+. |.++..+. .+++++++..|+.++||+..+. ++... +..++. +. .+.++
T Consensus 148 ~~~~E~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~ 220 (340)
T PLN02653 148 PPQSETTPFHPRSP--YAVAKVAAHWYTVNYR-EAYGLFACNGILFNHESPRRGE--NFVTRKITRAVGRIK--VGLQKK 220 (340)
T ss_pred CCCCCCCCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCeEEEeeeccccCCCCCc--ccchhHHHHHHHHHH--cCCCCc
Confidence 36788887766544 654 55555543 5678888999999999953322 22211 111111 11 23333
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047 235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR 314 (396)
Q Consensus 235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 314 (396)
.+.|++.+.++++|+.|+ |.+++.++... .++.||+++++.+|++|+++.+.+.+|.+.... ..
T Consensus 221 ~~~g~g~~~rd~i~v~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~-----------~~ 284 (340)
T PLN02653 221 LFLGNLDASRDWGFAGDY---VEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH-----------VE 284 (340)
T ss_pred eEeCCCcceecceeHHHH---HHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc-----------ee
Confidence 345888888888888776 77777766543 256899999999999999999999998642110 00
Q ss_pred CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
+.. ....+... ....+|++|+++ +||+|+++++|+|+++++|+++
T Consensus 285 ~~~-----------------~~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 285 IDP-----------------RYFRPAEV---------------DNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred eCc-----------------ccCCcccc---------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 000 00011110 133479999986 6999999999999999998764
No 15
>PLN00198 anthocyanidin reductase; Provisional
Probab=100.00 E-value=1e-32 Score=261.66 Aligned_cols=303 Identities=15% Similarity=0.102 Sum_probs=198.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ 93 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~ 93 (396)
+.++++||||||+||||++|+++|++ +|++|++++|++... ....++++++.+|++|++.+.+++.+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQ-----KGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG 80 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc
Confidence 34468999999999999999999999 899999999875321 11113588999999999999999999
Q ss_pred CCCeeEEEEeccCCCccH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC---
Q 016047 94 LTDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--- 169 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~--- 169 (396)
+|.|+|+|+.......++ ...+++|+.|+.+++++|++.. .+++++++||..+|+... ..+ ...+++|+.
T Consensus 81 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~-~~~----~~~~~~E~~~~~ 154 (338)
T PLN00198 81 CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINK-LSG----TGLVMNEKNWTD 154 (338)
T ss_pred CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccC-CCC----CCceeccccCCc
Confidence 999999987532222233 3567999999999999998753 367899888776664310 001 122334431
Q ss_pred ------CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 016047 170 ------PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG 238 (396)
Q Consensus 170 ------p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g 238 (396)
+..| ...|+. |+++..+. +.++++++++||++|||++.+........+ ...+. .+.++.+.|
T Consensus 155 ~~~~~~~~~p--~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~--~~~~~--~~~~~~~~g 227 (338)
T PLN00198 155 VEFLTSEKPP--TWGYPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGPSLTSDIPSSLSL--AMSLI--TGNEFLING 227 (338)
T ss_pred hhhhhhcCCc--cchhHHHHHHHHHHHHHHH-HhcCceEEEEeCCceECCCccCCCCCcHHH--HHHHH--cCCcccccc
Confidence 1112 222654 56666655 667899999999999995432111111111 11111 133333333
Q ss_pred -Cccc----cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 016047 239 -TKAA----WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ 313 (396)
Q Consensus 239 -~~~~----~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~ 313 (396)
.+.+ .++++|+.|+ |++++.++..+. .++.|+ +++..+|++|+++.+.+.++.....
T Consensus 228 ~~~~~~~~~~~~~i~V~D~---a~a~~~~~~~~~-~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~------------- 289 (338)
T PLN00198 228 LKGMQMLSGSISITHVEDV---CRAHIFLAEKES-ASGRYI-CCAANTSVPELAKFLIKRYPQYQVP------------- 289 (338)
T ss_pred ccccccccCCcceeEHHHH---HHHHHHHhhCcC-cCCcEE-EecCCCCHHHHHHHHHHHCCCCCCC-------------
Confidence 1211 2456666555 777777665533 234685 5567789999999999887532111
Q ss_pred cCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCC
Q 016047 314 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK 393 (396)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~ 393 (396)
.. ++..+.. ....+|.+|++++||+|+++++|+|+++++|+++++
T Consensus 290 -~~------------------~~~~~~~----------------~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 290 -TD------------------FGDFPSK----------------AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred -cc------------------ccccCCC----------------CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcC
Confidence 00 0000000 023479999998999999999999999999999999
Q ss_pred CC
Q 016047 394 IV 395 (396)
Q Consensus 394 ~~ 395 (396)
++
T Consensus 335 ~~ 336 (338)
T PLN00198 335 LL 336 (338)
T ss_pred CC
Confidence 86
No 16
>PLN02206 UDP-glucuronate decarboxylase
Probab=100.00 E-value=9.8e-33 Score=268.30 Aligned_cols=287 Identities=16% Similarity=0.121 Sum_probs=198.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
|+|||||||||||++|+++|++ +|++|++++|..... .....+++++.+|+.++. +.++|.|+|
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~-----~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViH 189 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMA-----RGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYH 189 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEE
Confidence 6899999999999999999999 899999998753211 112346788999987753 457899999
Q ss_pred EEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC--CCCC-
Q 016047 100 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP--RLDA- 174 (396)
Q Consensus 100 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p--~~~~- 174 (396)
+|+..... ..++.+.+++|+.|+.+|+++|++.+ . +++++||..+| |.. ...+.+|+.. ..|.
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~-r~V~~SS~~VY-------g~~--~~~p~~E~~~~~~~P~~ 257 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--A-RFLLTSTSEVY-------GDP--LQHPQVETYWGNVNPIG 257 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECChHHh-------CCC--CCCCCCccccccCCCCC
Confidence 99864332 22567888999999999999999875 3 67777765555 321 1345566531 1121
Q ss_pred CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047 175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 248 (396)
Q Consensus 175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 248 (396)
+...|+. |+++..+. +.++++++++||+++||+.... .......+. . ....+.++.++|++.+.+.++|
T Consensus 258 ~~s~Y~~SK~~aE~~~~~y~-~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i---~-~~l~~~~i~i~g~G~~~rdfi~ 332 (442)
T PLN02206 258 VRSCYDEGKRTAETLTMDYH-RGANVEVRIARIFNTYGPRMCIDDGRVVSNFV---A-QALRKEPLTVYGDGKQTRSFQF 332 (442)
T ss_pred ccchHHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCCccccchHHHHH---H-HHHcCCCcEEeCCCCEEEeEEe
Confidence 1223653 66666554 5678999999999999954221 112222221 1 1112556677888888888888
Q ss_pred cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047 249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW 328 (396)
Q Consensus 249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (396)
+.|+ |++++.++... .+++|||+++..+|++|+++.+++.+|.+..... .+.
T Consensus 333 V~Dv---a~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~----------~p~------------- 384 (442)
T PLN02206 333 VSDL---VEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF----------RPN------------- 384 (442)
T ss_pred HHHH---HHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee----------CCC-------------
Confidence 7776 77777766432 3568999999999999999999999985432100 000
Q ss_pred HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
.... .+ ...+|++|+++ +||+|+++++|+|+++++|+++
T Consensus 385 ---------~~~~-----~~----------~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~ 424 (442)
T PLN02206 385 ---------TEDD-----PH----------KRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQ 424 (442)
T ss_pred ---------CCCC-----cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 00 23479999997 6999999999999999999975
No 17
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=100.00 E-value=1.4e-32 Score=282.69 Aligned_cols=303 Identities=15% Similarity=0.135 Sum_probs=212.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-C------CCCCCCeeEEEecCCChHHHHHHH--hcC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N------WNADHLVEYVQCDVSDPEETQAKL--SQL 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~------~~~~~~v~~~~~Dl~d~~~~~~~~--~~~ 94 (396)
.+|+|||||||||||++|+++|++.. .+++|++++|.... . ....++++++.+|+.|.+.+..++ .++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g---~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNY---PDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhC---CCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 45799999999999999999999821 26899999985311 0 011247899999999998887665 568
Q ss_pred CCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047 95 TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 172 (396)
Q Consensus 95 ~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~ 172 (396)
|.|+|+|+...... .++.+.+++|+.||.+++++|++.+ .+++++++||..+|+.+. . ....+..|+.+..
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~---~---~~~~~~~E~~~~~ 154 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD---E---DADVGNHEASQLL 154 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCc---c---ccccCccccCCCC
Confidence 89999988644322 2456778999999999999999864 478899888766554321 0 0012235666655
Q ss_pred CCCCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047 173 DAPNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 246 (396)
Q Consensus 173 ~~~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 246 (396)
|... |+ .|+++..+. ++.+++++++||++||| |+... .+...+. . ....+.++.+.|++.+.+++
T Consensus 155 p~~~--Y~~sK~~aE~~v~~~~-~~~~l~~vilR~~~VyG--p~~~~~~~i~~~~---~-~a~~g~~i~i~g~g~~~r~~ 225 (668)
T PLN02260 155 PTNP--YSATKAGAEMLVMAYG-RSYGLPVITTRGNNVYG--PNQFPEKLIPKFI---L-LAMQGKPLPIHGDGSNVRSY 225 (668)
T ss_pred CCCC--cHHHHHHHHHHHHHHH-HHcCCCEEEECcccccC--cCCCcccHHHHHH---H-HHhCCCCeEEecCCCceEee
Confidence 5444 54 366666654 56789999999999999 44322 2222221 1 11135566777888888888
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047 247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 326 (396)
Q Consensus 247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (396)
+|+.|+ |++++.++.. ...+++||+++++.+|+.|+++.+++.+|.+.... +.
T Consensus 226 ihV~Dv---a~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-------------i~---------- 278 (668)
T PLN02260 226 LYCEDV---AEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-------------IK---------- 278 (668)
T ss_pred EEHHHH---HHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-------------ee----------
Confidence 888887 6666655543 44578999999999999999999999999653210 00
Q ss_pred HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCC
Q 016047 327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKI 394 (396)
Q Consensus 327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~ 394 (396)
+ ....++. ...+..|++|++++||+|+++++|+|+++++|+++.+.
T Consensus 279 --------~-~~~~p~~-------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 279 --------F-VENRPFN-------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred --------e-cCCCCCC-------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 0 0000110 01345799999999999999999999999999987653
No 18
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=3.2e-32 Score=256.96 Aligned_cols=301 Identities=19% Similarity=0.202 Sum_probs=204.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+|+||||||+||||++|+++|++ +|++|++++|++.... ....+++++.+|++|++++.++++++|
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 79 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLF-----RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE 79 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence 47999999999999999999999 8999999988764310 011368899999999999999999999
Q ss_pred CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047 96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 173 (396)
Q Consensus 96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~ 173 (396)
.|+|+|+...... .++...+++|+.|+.+++++|.+.. ..++|+++||...|+.+....+ ...+++|+.+..|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~----~~~~~~E~~~~~p 154 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG----PNDVVDETFFTNP 154 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC----CCCccCcCCCCch
Confidence 9999988543221 2456788999999999999998752 3568888887655533210011 1346788877654
Q ss_pred C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047 174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 244 (396)
Q Consensus 174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 244 (396)
. +...|+. |+++..+. ++.+++++++||+++||+......++...+ ...+.. +.+. + + .+.+
T Consensus 155 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~--i~~~~~--~~~~-~-~--~~~r 225 (325)
T PLN02989 155 SFAEERKQWYVLSKTLAEDAAWRFA-KDNEIDLIVLNPGLVTGPILQPTLNFSVAV--IVELMK--GKNP-F-N--TTHH 225 (325)
T ss_pred hHhcccccchHHHHHHHHHHHHHHH-HHcCCeEEEEcCCceeCCCCCCCCCchHHH--HHHHHc--CCCC-C-C--CcCc
Confidence 3 1233654 55555554 567899999999999995432222222112 111111 2221 1 2 2334
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324 (396)
Q Consensus 245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
.++|+.|+ |++++.++..+.. +++||++ +..+|++|+++.+.+.++...... .
T Consensus 226 ~~i~v~Dv---a~a~~~~l~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~~~-----------~----------- 278 (325)
T PLN02989 226 RFVDVRDV---ALAHVKALETPSA-NGRYIID-GPVVTIKDIENVLREFFPDLCIAD-----------R----------- 278 (325)
T ss_pred CeeEHHHH---HHHHHHHhcCccc-CceEEEe-cCCCCHHHHHHHHHHHCCCCCCCC-----------C-----------
Confidence 66666665 7887777665433 5689995 568999999999999986321100 0
Q ss_pred hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 395 (396)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~ 395 (396)
+..... . ...+...|++|++++||+|+++++++|+++++|+++.|.+
T Consensus 279 --------------~~~~~~-~---------~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~ 325 (325)
T PLN02989 279 --------------NEDITE-L---------NSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV 325 (325)
T ss_pred --------------CCCccc-c---------cccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000000 0 0003457999999999999999999999999999988763
No 19
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=2.1e-32 Score=257.92 Aligned_cols=298 Identities=17% Similarity=0.176 Sum_probs=200.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+++|||||||||||++|+++|++ +||+|++++|+.... .. ..++++++.+|++|++.+.++++++|
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 78 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQ-----RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE 78 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHH-----CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence 47899999999999999999999 899999999875421 00 12468899999999999999999999
Q ss_pred CeeEEEEeccCCCccH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC-CCCCCccCCCCCCC
Q 016047 96 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD 173 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~p~~E~~p~~~ 173 (396)
.|+|+|+.......++ ...+++|+.|+.+++++|++. .++++++++||...+ .|+... ....+++|+.+..|
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~-----~y~~~~~~~~~~~~E~~~~~p 152 (322)
T PLN02662 79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAV-----AYNGKPLTPDVVVDETWFSDP 152 (322)
T ss_pred EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHh-----cCCCcCCCCCCcCCcccCCCh
Confidence 9999987543222334 367899999999999999875 237788888764321 233211 11346778766544
Q ss_pred C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047 174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 244 (396)
Q Consensus 174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 244 (396)
. ....|+. |+++..+. ++.+++++++||+++||+......+....+ ...+.. +.+ .++ .+.+
T Consensus 153 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~--~~~~~~--~~~-~~~---~~~~ 223 (322)
T PLN02662 153 AFCEESKLWYVLSKTLAEEAAWKFA-KENGIDMVTINPAMVIGPLLQPTLNTSAEA--ILNLIN--GAQ-TFP---NASY 223 (322)
T ss_pred hHhhcccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCCCCCCchHHH--HHHHhc--CCc-cCC---CCCc
Confidence 2 1123664 44444444 567899999999999995322211211111 111111 222 122 2345
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324 (396)
Q Consensus 245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
+++|+.|+ |++++.++..+.. ++.||++ +..+|++|+++.+.+.++....+ ...
T Consensus 224 ~~i~v~Dv---a~a~~~~~~~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~--------------~~~------- 277 (322)
T PLN02662 224 RWVDVRDV---ANAHIQAFEIPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQLP--------------EKC------- 277 (322)
T ss_pred CeEEHHHH---HHHHHHHhcCcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCCCC--------------CCC-------
Confidence 66666665 7887777765443 3468887 57899999999999987632111 000
Q ss_pred hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 395 (396)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~ 395 (396)
. ...+. .....+|++|++++||++ ++++++|+++++||+++|++
T Consensus 278 ----------~--~~~~~--------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 278 ----------A--DDKPY--------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred ----------C--Ccccc--------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence 0 00000 012347999999999996 79999999999999999986
No 20
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=238.58 Aligned_cols=302 Identities=17% Similarity=0.144 Sum_probs=217.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC---CC-C---CCCCCCeeEEEecCCChHHHHHHHh--cCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---KP-N---WNADHLVEYVQCDVSDPEETQAKLS--QLTD 96 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~---~~-~---~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~ 96 (396)
+++|||||+||||++.+..+..++ ..++.++++.-. .. . ....++..++++|+.+...+.-.+. .+|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~---p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKY---PDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCC---CCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 799999999999999999999865 345666666421 11 1 1124688999999999887766554 3667
Q ss_pred eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047 97 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 97 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~ 174 (396)
|+|.|+....... ++.+....|+.+|+.||++++..+ ++++|+++|+..+||.+. . .....|.+++.|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~-------~-~~~~~E~s~~nPt 154 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSD-------E-DAVVGEASLLNPT 154 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcc-------c-cccccccccCCCC
Confidence 9999887665433 778889999999999999999875 699999888766665432 1 1122266666666
Q ss_pred CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047 175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 248 (396)
Q Consensus 175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 248 (396)
.+ |+. |..++.+. ++++++++++|.++||| |+... .....| +.+.. .+.+.++.|++.+.+++++
T Consensus 155 np--yAasKaAaE~~v~Sy~-~sy~lpvv~~R~nnVYG--P~q~~~klipkF---i~l~~-~~~~~~i~g~g~~~rs~l~ 225 (331)
T KOG0747|consen 155 NP--YAASKAAAEMLVRSYG-RSYGLPVVTTRMNNVYG--PNQYPEKLIPKF---IKLAM-RGKEYPIHGDGLQTRSYLY 225 (331)
T ss_pred Cc--hHHHHHHHHHHHHHHh-hccCCcEEEEeccCccC--CCcChHHHhHHH---HHHHH-hCCCcceecCcccceeeEe
Confidence 55 553 55666665 89999999999999999 66432 222222 22222 3667788999999999999
Q ss_pred cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047 249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW 328 (396)
Q Consensus 249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (396)
+.|+ ++++..++ .++..|++|||+++...+.-|+++.+.+.++..-+..+. .|. ..++
T Consensus 226 veD~---~ea~~~v~-~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~---------~p~--~~~v------- 283 (331)
T KOG0747|consen 226 VEDV---SEAFKAVL-EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDT---------EPF--IFFV------- 283 (331)
T ss_pred HHHH---HHHHHHHH-hcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCC---------CCc--ceec-------
Confidence 9997 55544444 447779999999999999999999999998765432111 000 0000
Q ss_pred HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047 329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
...+. +..++..|.+|+|.|||+|+++.++||+.+|+||.++
T Consensus 284 ---------~dRp~-------------nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 284 ---------EDRPY-------------NDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred ---------CCCCc-------------ccccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 00111 1116778999999999999999999999999999764
No 21
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=4.9e-32 Score=255.35 Aligned_cols=298 Identities=17% Similarity=0.175 Sum_probs=201.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C----CCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W----NADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~----~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+++|||||||||||++++++|++ .||+|++++|+.... . ....+++++.+|++|++.+.++++++|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d 79 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLL-----RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD 79 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence 47999999999999999999999 899999999875431 0 012468899999999999999999999
Q ss_pred CeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC-CCCCCccCCCCCCC
Q 016047 96 DVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD 173 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~p~~E~~p~~~ 173 (396)
.|+|+|+.......+ ....+++|+.|+.+++++|++. ..+++|+++||...| .|+... ....+++|+.+..|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~-----~~~~~~~~~~~~~~E~~~~~p 153 (322)
T PLN02986 80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAV-----LFRQPPIEANDVVDETFFSDP 153 (322)
T ss_pred EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhhe-----ecCCccCCCCCCcCcccCCCh
Confidence 999998753322223 3456899999999999999874 247889988876543 122110 11345667664333
Q ss_pred C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047 174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE 244 (396)
Q Consensus 174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 244 (396)
. +...|+. |+++.++. ++++++++++||++|||+......++...+. ..... +.++ .+ .+.+
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~--~~~~~--g~~~--~~--~~~~ 224 (322)
T PLN02986 154 SLCRETKNWYPLSKILAENAAWEFA-KDNGIDMVVLNPGFICGPLLQPTLNFSVELI--VDFIN--GKNL--FN--NRFY 224 (322)
T ss_pred HHhhccccchHHHHHHHHHHHHHHH-HHhCCeEEEEcccceeCCCCCCCCCccHHHH--HHHHc--CCCC--CC--CcCc
Confidence 1 2233653 56666665 5679999999999999954222212211111 11111 3332 22 3345
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324 (396)
Q Consensus 245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
.++|+.|+ |++++.++..+.. +++||++ +..+|++|+++.+.+.++.. . ++ ..
T Consensus 225 ~~v~v~Dv---a~a~~~al~~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~-~-~~------------~~-------- 277 (322)
T PLN02986 225 RFVDVRDV---ALAHIKALETPSA-NGRYIID-GPIMSVNDIIDILRELFPDL-C-IA------------DT-------- 277 (322)
T ss_pred ceeEHHHH---HHHHHHHhcCccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC-C-CC------------CC--------
Confidence 56666665 8888887776544 3589995 56899999999999998621 1 10 00
Q ss_pred hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV 395 (396)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~ 395 (396)
.++..... ....+|++|+++|||+|+ +++|+|+++++|+++.|+|
T Consensus 278 ------------~~~~~~~~-------------~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 278 ------------NEESEMNE-------------MICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred ------------Cccccccc-------------cCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 00000000 012369999999999985 9999999999999999976
No 22
>PLN02240 UDP-glucose 4-epimerase
Probab=100.00 E-value=6.2e-32 Score=257.86 Aligned_cols=303 Identities=17% Similarity=0.141 Sum_probs=207.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C--CCCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W--NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
++++|||||||||||++|+++|++ .|++|++++|..... . ....+++++.+|++|++.+.+++.
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~ 78 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLL-----AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA 78 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence 458999999999999999999998 799999998753211 0 012367899999999999988886
Q ss_pred --cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047 93 --QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 168 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~ 168 (396)
++|.|+|+|+..... ..++...+++|+.++.+++++|++.+ +++++++||..+| |.. ...+++|+
T Consensus 79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~vy-------g~~--~~~~~~E~ 147 (352)
T PLN02240 79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG--CKKLVFSSSATVY-------GQP--EEVPCTEE 147 (352)
T ss_pred hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHh-------CCC--CCCCCCCC
Confidence 578899998753221 22567789999999999999998754 6788888765544 321 24578888
Q ss_pred CCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-----hhHHHHHHH-HHHhhhcCCCceec
Q 016047 169 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-----NLVGALCVY-AAVCKHEGIPLRFP 237 (396)
Q Consensus 169 ~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~-~~i~~~~~~~~~~~ 237 (396)
.|..+... |+. |+++..+.....+++++++|++++||+.+.... .....+..+ ..+..+...++.+.
T Consensus 148 ~~~~~~~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T PLN02240 148 FPLSATNP--YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF 225 (352)
T ss_pred CCCCCCCH--HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence 87766443 664 555555432345789999999999996542110 000111111 11222222233333
Q ss_pred C------CccccceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhc
Q 016047 238 G------TKAAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEE 307 (396)
Q Consensus 238 g------~~~~~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~ 307 (396)
| ++.+.+.++|+.|+ |++++.++.. +...+++||+++++.+|++|+++.+++.+|.+.+...
T Consensus 226 g~~~~~~~g~~~~~~i~v~D~---a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~----- 297 (352)
T PLN02240 226 GNDYPTKDGTGVRDYIHVMDL---ADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKL----- 297 (352)
T ss_pred CCCCCCCCCCEEEeeEEHHHH---HHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCcee-----
Confidence 3 55666777877776 5655554432 2344689999999999999999999999986543210
Q ss_pred CCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHH
Q 016047 308 GGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWI 386 (396)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~ 386 (396)
.+ ..+... ..+.+|++|+++ +||+|+++++++|++++
T Consensus 298 -------~~--------------------~~~~~~---------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~ 335 (352)
T PLN02240 298 -------AP--------------------RRPGDA---------------EEVYASTEKAEKELGWKAKYGIDEMCRDQW 335 (352)
T ss_pred -------CC--------------------CCCCCh---------------hhhhcCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 00 000000 023469999986 69999999999999999
Q ss_pred HHHhhCCC
Q 016047 387 DKVKGFKI 394 (396)
Q Consensus 387 ~~~~~~~~ 394 (396)
+|+++++.
T Consensus 336 ~~~~~~~~ 343 (352)
T PLN02240 336 NWASKNPY 343 (352)
T ss_pred HHHHhCcc
Confidence 99998764
No 23
>PLN02650 dihydroflavonol-4-reductase
Probab=100.00 E-value=5.8e-32 Score=257.80 Aligned_cols=299 Identities=15% Similarity=0.136 Sum_probs=196.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------C-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------N-ADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~-~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+++|||||||||||++|+++|++ +|++|++++|++.... . ...+++++.+|+.|++.+.++++++|
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHH-----CCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 46899999999999999999999 8999999998753320 0 01257889999999999999999999
Q ss_pred CeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCC-ccCCCCC--
Q 016047 96 DVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-FTEDMPR-- 171 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p-~~E~~p~-- 171 (396)
.|+|+|+.......+ ....+++|+.||.+++++|++.+ .+++|+++||...|+.. +...+ ++|+...
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~--------~~~~~~~~E~~~~~~ 150 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVE--------EHQKPVYDEDCWSDL 150 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccC--------CCCCCccCcccCCch
Confidence 999998753322223 34678999999999999998863 26788888765444221 01122 3444211
Q ss_pred -----CCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047 172 -----LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 241 (396)
Q Consensus 172 -----~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 241 (396)
.+.+...|+. |.++..+. ++++++++++||++|||+..+.. ....+...+. ...+.... .+..
T Consensus 151 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~~--~~~~~~~~-~~~~- 223 (351)
T PLN02650 151 DFCRRKKMTGWMYFVSKTLAEKAAWKYA-AENGLDFISIIPTLVVGPFISTS--MPPSLITALS--LITGNEAH-YSII- 223 (351)
T ss_pred hhhhccccccchHHHHHHHHHHHHHHHH-HHcCCeEEEECCCceECCCCCCC--CCccHHHHHH--HhcCCccc-cCcC-
Confidence 0111223664 55555554 66799999999999999543221 1111111111 11121111 1211
Q ss_pred ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047 242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM 321 (396)
Q Consensus 242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (396)
+.+.++|+.|+ |++++.++..+.. ++.| ++++..+|++|+++.+.+.++....+ ..+.
T Consensus 224 ~~r~~v~V~Dv---a~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~------------~~~~----- 281 (351)
T PLN02650 224 KQGQFVHLDDL---CNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNIP------------ARFP----- 281 (351)
T ss_pred CCcceeeHHHH---HHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCCC------------CCCC-----
Confidence 22466666665 7887777765433 3478 45667899999999999987622111 0000
Q ss_pred ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047 322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396 (396)
Q Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (396)
+ .+... .....|++|++++||+|+++++++|+++++|+++.+++|
T Consensus 282 --------------~-~~~~~---------------~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 282 --------------G-IDEDL---------------KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred --------------C-cCccc---------------ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 0 00000 023469999988999999999999999999999999875
No 24
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=100.00 E-value=2e-32 Score=256.33 Aligned_cols=289 Identities=13% Similarity=0.152 Sum_probs=186.2
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH---HH-HHHHh-----cCCCee
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE---ET-QAKLS-----QLTDVT 98 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~---~~-~~~~~-----~~~~V~ 98 (396)
|||||||||||++|+++|++ .|++|+++.|+..... ...++..+|+.|.. ++ .+++. ++|.|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~-----~g~~~v~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi 73 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGT---KFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF 73 (308)
T ss_pred EEEecCCcHHHHHHHHHHHh-----CCCceEEEecCCCcch---HHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence 89999999999999999999 7998777766543211 11123456666543 32 33332 578899
Q ss_pred EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047 99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY 178 (396)
Q Consensus 99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~ 178 (396)
|+|+.......++...++.|+.++.+|+++|++.+ + +++++||..+| |.. ...+.+|+.+..|...
T Consensus 74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~-~~i~~SS~~vy-------g~~--~~~~~~E~~~~~p~~~-- 139 (308)
T PRK11150 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATY-------GGR--TDDFIEEREYEKPLNV-- 139 (308)
T ss_pred ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEcchHHh-------CcC--CCCCCccCCCCCCCCH--
Confidence 99985433222455678999999999999999864 4 47777765544 431 1235667666555443
Q ss_pred hhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHH-HHhhhcCC-CceecCCccccceeeeccc
Q 016047 179 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGI-PLRFPGTKAAWECYSIASD 251 (396)
Q Consensus 179 y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~g~~~~~~~~~~~~d 251 (396)
|+. |+++.++. .+.+++++++||++|||++......+...+..+. .+.+ +. +..+.|++...+.++|+.|
T Consensus 140 Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~g~~~~~r~~i~v~D 216 (308)
T PRK11150 140 YGYSKFLFDEYVRQIL-PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN--GENPKLFEGSENFKRDFVYVGD 216 (308)
T ss_pred HHHHHHHHHHHHHHHH-HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc--CCCCEEecCCCceeeeeeeHHH
Confidence 664 56666554 5568999999999999954322111111111111 1222 33 3344566666677777777
Q ss_pred HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHH
Q 016047 252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI 331 (396)
Q Consensus 252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (396)
+ |.+++.++... .+++||++++..+|+.|+++.+.+.+|...... .+.
T Consensus 217 ~---a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~-----------~~~---------------- 264 (308)
T PRK11150 217 V---AAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY-----------IPF---------------- 264 (308)
T ss_pred H---HHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee-----------ccC----------------
Confidence 6 66666665432 357999999999999999999999998421110 000
Q ss_pred HHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCcc-ccCHHHHHHHHHHHh
Q 016047 332 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGF-RNSKNSFITWIDKVK 390 (396)
Q Consensus 332 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~-~~~~~~~~~~~~~~~ 390 (396)
+..... . +. .....|++|++++||+|+ .+++++|+++++|+.
T Consensus 265 -------~~~~~~--~-------~~-~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 265 -------PDKLKG--R-------YQ-AFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred -------cccccc--c-------cc-eecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 000000 0 00 023479999999999987 599999999999975
No 25
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=100.00 E-value=1.4e-31 Score=254.86 Aligned_cols=298 Identities=15% Similarity=0.099 Sum_probs=201.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcC--CC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQL--TD 96 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~ 96 (396)
+|+|||||||||||++++++|++ +|++|++++|++.... ....+++++.+|++|.+++.++++.+ |.
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLE-----LGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHH-----CCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 57999999999999999999999 8999999998764321 01235778999999999999988864 78
Q ss_pred eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047 97 VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 97 V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~ 174 (396)
|+|+|+...... .++...+++|+.++.+++++|++.+ .+++++++||..+|+.. ....+++|+.+..|.
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~--------~~~~~~~e~~~~~p~ 149 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRND--------EWVWGYRETDPLGGH 149 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCC--------CCCCCCccCCCCCCC
Confidence 999987543322 2567788999999999999998753 25688888765555321 012356777665554
Q ss_pred CCcchhH-----HHHHHHHhhcC-------CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047 175 PNFYYTL-----EDILFEEVEKK-------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA 242 (396)
Q Consensus 175 ~~~~y~~-----e~~l~~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 242 (396)
.. |+. |.++..+. ++ .+++++++||+++||++......+...+ +... ..+.++.+ +++.+
T Consensus 150 ~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~---~~~~-~~g~~~~~-~~g~~ 221 (349)
T TIGR02622 150 DP--YSSSKACAELVIASYR-SSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDV---IRAF-SSNKIVII-RNPDA 221 (349)
T ss_pred Cc--chhHHHHHHHHHHHHH-HHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHH---HHHH-hcCCCeEE-CCCCc
Confidence 44 553 55554443 22 3899999999999994321111222222 1111 12445444 45677
Q ss_pred cceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCC--CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCC
Q 016047 243 WECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK 316 (396)
Q Consensus 243 ~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~--~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 316 (396)
.+.++|+.|+ +.+++.++.. +...+++|||+++ ..+|+.|+++.+.+.++.....+.. .+.
T Consensus 222 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------~~~- 288 (349)
T TIGR02622 222 TRPWQHVLEP---LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED---------DSD- 288 (349)
T ss_pred ccceeeHHHH---HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee---------ccC-
Confidence 7888888776 5666555432 1233679999975 6899999999999887632211100 000
Q ss_pred HHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 317 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
...+... .....|++|+++ +||+|+++++++|+++++|+++
T Consensus 289 -------------------~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~ 330 (349)
T TIGR02622 289 -------------------LNHPHEA---------------RLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKA 330 (349)
T ss_pred -------------------CCCCccc---------------ceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 0000000 024579999987 6999999999999999999875
No 26
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=100.00 E-value=2.4e-31 Score=252.38 Aligned_cols=299 Identities=15% Similarity=0.102 Sum_probs=201.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh--cCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~--~~~ 95 (396)
|+|||||||||||++|+++|++ +|++|++++|...... ....++.++.+|++|++.+.+++. ++|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID 75 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHH-----CCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence 4799999999999999999999 8999999987532110 012356788999999999988886 478
Q ss_pred CeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC-C
Q 016047 96 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-L 172 (396)
Q Consensus 96 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~-~ 172 (396)
.|+|+|+..... ...+.+.+++|+.++.+++++|++.+ +++++++||..+| |.. ...+++|++|. .
T Consensus 76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~y-------g~~--~~~~~~E~~~~~~ 144 (338)
T PRK10675 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNLIFSSSATVY-------GDQ--PKIPYVESFPTGT 144 (338)
T ss_pred EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhh-------CCC--CCCccccccCCCC
Confidence 899998754322 12456788999999999999999864 6788887765544 421 24567888775 3
Q ss_pred CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch-----hHHHHHHH-HHHhhhcCCCceecC---
Q 016047 173 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-----LVGALCVY-AAVCKHEGIPLRFPG--- 238 (396)
Q Consensus 173 ~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~-~~i~~~~~~~~~~~g--- 238 (396)
|.. .|+. |+++.++.....+++++++|++++||+.|...+. ....+..+ ..+..+...++...|
T Consensus 145 p~~--~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
T PRK10675 145 PQS--PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY 222 (338)
T ss_pred CCC--hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence 433 3653 6666665312347999999999999965432110 01111111 111211112222222
Q ss_pred ---CccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 016047 239 ---TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ 313 (396)
Q Consensus 239 ---~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~ 313 (396)
++.+.++++|+.|+ |++++.++.. ....+++||+++++.+|++|+++.+.+.+|.+.....
T Consensus 223 ~~~~g~~~~~~v~v~D~---a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~----------- 288 (338)
T PRK10675 223 PTEDGTGVRDYIHVMDL---ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF----------- 288 (338)
T ss_pred CCCCCcEEEeeEEHHHH---HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee-----------
Confidence 45566677777776 6666666543 2234689999999999999999999999997542210
Q ss_pred cCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 314 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
.+. .+... ....+|++|+++ +||+|+++++++|+++++|+++.
T Consensus 289 -~~~--------------------~~~~~---------------~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 289 -APR--------------------REGDL---------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred -CCC--------------------CCCch---------------hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 000 00000 023479999986 59999999999999999999863
No 27
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=100.00 E-value=2.9e-31 Score=253.24 Aligned_cols=309 Identities=15% Similarity=0.118 Sum_probs=205.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCC-CC------CCCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PN------WNADHLVEYVQCDVSDPEETQAKLSQ--LT 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~-~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~ 95 (396)
|+|||||||||||++|+++|++ +|++ |++++|... .. .....+++++.+|++|.+++.+++.. +|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIIN-----NTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD 75 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHH-----hCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 4799999999999999999998 6765 666665431 10 00123577899999999999998875 78
Q ss_pred CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEeccceeecccccccccCC-CCC-CC
Q 016047 96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEAFGKIK-PYD-PP 164 (396)
Q Consensus 96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~-~p 164 (396)
.|+|+|+...... .++.+.+++|+.|+.+++++|++.. .++++++++||..+|+..... .... ... .+
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~~~~~~ 154 (352)
T PRK10084 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHP-DEVENSEELPL 154 (352)
T ss_pred EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcc-ccccccccCCC
Confidence 8999998643321 2467789999999999999998641 235678888776656421000 0000 001 23
Q ss_pred ccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecC
Q 016047 165 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPG 238 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g 238 (396)
++|+.+..|... |+. |+++..+. +.++++++++||+.||| |+... .+...+.. .. ..+.++.+.|
T Consensus 155 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~vilr~~~v~G--p~~~~~~~~~~~~~--~~--~~~~~~~~~~ 225 (352)
T PRK10084 155 FTETTAYAPSSP--YSASKASSDHLVRAWL-RTYGLPTIVTNCSNNYG--PYHFPEKLIPLVIL--NA--LEGKPLPIYG 225 (352)
T ss_pred ccccCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeccceeC--CCcCccchHHHHHH--HH--hcCCCeEEeC
Confidence 678777666544 554 55555554 56789999999999999 44321 22222211 11 1244566677
Q ss_pred CccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHH
Q 016047 239 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA 318 (396)
Q Consensus 239 ~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 318 (396)
++.+.+.++|+.|+ |.+++.++.. ...+++||+++++.+|++|+++.+++.+|...+.. ....
T Consensus 226 ~g~~~~~~v~v~D~---a~a~~~~l~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-------------~~~~ 288 (352)
T PRK10084 226 KGDQIRDWLYVEDH---ARALYKVVTE-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-------------TSYR 288 (352)
T ss_pred CCCeEEeeEEHHHH---HHHHHHHHhc-CCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc-------------cchh
Confidence 77777888877776 7777666554 34578999999999999999999999998642210 0000
Q ss_pred HHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 319 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
. ........... ...+.+|++|+++ +||+|+++++++|+++++|+++.
T Consensus 289 ~--------------~~~~~~~~~~~------------~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 289 E--------------QITYVADRPGH------------DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred h--------------hccccccCCCC------------CceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 0 00000000000 0134579999986 79999999999999999999864
No 28
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.1e-31 Score=232.43 Aligned_cols=292 Identities=19% Similarity=0.194 Sum_probs=207.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC------CCCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NWNADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+..+++|+||||.||||+||++.|+. +||+|++++..... .+...++++.+.-|+..+ .+..+|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~-----egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD 93 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMT-----EGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD 93 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHh-----cCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence 34458999999999999999999998 89999999964322 233456777777777655 678889
Q ss_pred CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC-
Q 016047 96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL- 172 (396)
Q Consensus 96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~- 172 (396)
.|+|+|+.+.... .++...+.+|+.||.+++..|++.+ +++++.| ++++||+ +..+|..|+....
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aS-------TseVYgd--p~~hpq~e~ywg~v 161 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLAS-------TSEVYGD--PLVHPQVETYWGNV 161 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEee-------cccccCC--cccCCCcccccccc
Confidence 9999998765432 2678889999999999999999875 5556554 3447775 3466766665332
Q ss_pred -CC-CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047 173 -DA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC 245 (396)
Q Consensus 173 -~~-~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 245 (396)
|. +...|.. |.++-.|. ++.|+.+.|.|+.+.|| |+..++-......+.. ..-.+.|+...|++.|.++
T Consensus 162 npigpr~cydegKr~aE~L~~~y~-k~~giE~rIaRifNtyG--Prm~~~dgrvvsnf~~-q~lr~epltv~g~G~qtRS 237 (350)
T KOG1429|consen 162 NPIGPRSCYDEGKRVAETLCYAYH-KQEGIEVRIARIFNTYG--PRMHMDDGRVVSNFIA-QALRGEPLTVYGDGKQTRS 237 (350)
T ss_pred CcCCchhhhhHHHHHHHHHHHHhh-cccCcEEEEEeeecccC--CccccCCChhhHHHHH-HHhcCCCeEEEcCCcceEE
Confidence 22 2344664 55555554 78899999999999999 5533322111111111 1113678889999999999
Q ss_pred eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccch
Q 016047 246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE 325 (396)
Q Consensus 246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (396)
+.++.|+ .+.++.+..++.. +.|||+++...|+.||++++.+..|-.....
T Consensus 238 F~yvsD~---Vegll~Lm~s~~~--~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~------------------------ 288 (350)
T KOG1429|consen 238 FQYVSDL---VEGLLRLMESDYR--GPVNIGNPGEFTMLELAEMVKELIGPVSEIE------------------------ 288 (350)
T ss_pred EEeHHHH---HHHHHHHhcCCCc--CCcccCCccceeHHHHHHHHHHHcCCCccee------------------------
Confidence 9999887 6677766654433 3399999999999999999999885332210
Q ss_pred HHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 326 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
.+.-.+.+-. ....|++||++ |||.|+.+++|+|..++.|+++
T Consensus 289 --------~~~~~~Ddp~---------------kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 289 --------FVENGPDDPR---------------KRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred --------ecCCCCCCcc---------------ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 0000011100 23469999998 5999999999999999999976
No 29
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=100.00 E-value=8.6e-31 Score=246.10 Aligned_cols=297 Identities=14% Similarity=0.128 Sum_probs=206.4
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCC----C---CCCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKP----N---WNADHLVEYVQCDVSDPEETQAKLSQ--LT 95 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~----~---~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~ 95 (396)
+|||||||||||++|+++|++ .| ++|++++|.... . ....++++++.+|++|++++.+++++ +|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILN-----EHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHH-----hCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence 589999999999999999998 45 789999874211 0 11123678999999999999999988 89
Q ss_pred CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047 96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 173 (396)
Q Consensus 96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~ 173 (396)
.|+|+|+...... .++...+++|+.++.+++++|.+...+. +++++||..+|++. . ...+++|+.+..|
T Consensus 76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~v~g~~-------~-~~~~~~e~~~~~~ 146 (317)
T TIGR01181 76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEF-RFHHISTDEVYGDL-------E-KGDAFTETTPLAP 146 (317)
T ss_pred EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEeeccceeCCC-------C-CCCCcCCCCCCCC
Confidence 9999987644322 2456778999999999999998764323 57777766655432 1 1225677776655
Q ss_pred CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047 174 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI 248 (396)
Q Consensus 174 ~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~ 248 (396)
... |+. |.++..+. .+.+++++++||+.+||+... ...+...+.. .+ ..+.++++.+++.+.++++|
T Consensus 147 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~R~~~i~G~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~g~~~~~~i~ 218 (317)
T TIGR01181 147 SSP--YSASKAASDHLVRAYH-RTYGLPALITRCSNNYGPYQF-PEKLIPLMIT--NA--LAGKPLPVYGDGQQVRDWLY 218 (317)
T ss_pred CCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCC-cccHHHHHHH--HH--hcCCCceEeCCCceEEeeEE
Confidence 433 553 55555554 567899999999999994321 1122222211 11 12445666777777777777
Q ss_pred cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047 249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW 328 (396)
Q Consensus 249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (396)
+.|+ ++++..+..+ ...+++||++++..+|++|+++.+.+.+|.+...... .
T Consensus 219 v~D~---a~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~-----------------~------- 270 (317)
T TIGR01181 219 VEDH---CRAIYLVLEK-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLITH-----------------V------- 270 (317)
T ss_pred HHHH---HHHHHHHHcC-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccc-----------------c-------
Confidence 7765 7776666544 4457899999999999999999999999864321100 0
Q ss_pred HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCC
Q 016047 329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV 395 (396)
Q Consensus 329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 395 (396)
...... ...+.+|++|+++ +||+|+++++++++++++||++..+.
T Consensus 271 ----------~~~~~~------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~ 316 (317)
T TIGR01181 271 ----------EDRPGH------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWW 316 (317)
T ss_pred ----------CCCccc------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccCC
Confidence 000000 0023479999985 69999999999999999999987763
No 30
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=100.00 E-value=2.6e-31 Score=248.54 Aligned_cols=282 Identities=15% Similarity=0.126 Sum_probs=194.5
Q ss_pred EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEeccC
Q 016047 29 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYVTWT 106 (396)
Q Consensus 29 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~~~~ 106 (396)
||||||||||++|+++|++ .|++|+++.++ ..+|+.|.+++.++++. +|.|+|+|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~-----~g~~v~~~~~~-------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEA-----LGFTNLVLRTH-------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHh-----CCCcEEEeecc-------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence 6999999999999999998 78887766432 15899999999988875 5789999986432
Q ss_pred -C--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC----CCCCCCcch
Q 016047 107 -N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP----RLDAPNFYY 179 (396)
Q Consensus 107 -~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p----~~~~~~~~y 179 (396)
. ..++.+.+++|+.++.+|+++|++.+ +++++++||..+|+.. ...|++|+++ ..|... .|
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p~~~-~Y 130 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKF---------APQPIPETALLTGPPEPTNE-WY 130 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCC---------CCCCCCHHHhccCCCCCCcc-hH
Confidence 1 23456778999999999999999864 7788888876655421 2456788763 223221 26
Q ss_pred hH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC-c--chhHHHHHHHHHHhhhcCCCcee-cCCccccceeeecc
Q 016047 180 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-L--MNLVGALCVYAAVCKHEGIPLRF-PGTKAAWECYSIAS 250 (396)
Q Consensus 180 ~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~~-~g~~~~~~~~~~~~ 250 (396)
+. |+++..+. +..+++++++||+.|||+.... . ......+..........+.++.+ .|++.+.++++|+.
T Consensus 131 ~~sK~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 209 (306)
T PLN02725 131 AIAKIAGIKMCQAYR-IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD 209 (306)
T ss_pred HHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence 54 55555544 5678999999999999954221 0 11122221111011123555444 67777777777777
Q ss_pred cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047 251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE 330 (396)
Q Consensus 251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (396)
|+ +++++.++... ..++.||++++..+|+.|+++.+++.+|.+...... .
T Consensus 210 Dv---~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~-------------- 259 (306)
T PLN02725 210 DL---ADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD------------T-------------- 259 (306)
T ss_pred HH---HHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec------------C--------------
Confidence 76 77776666543 334679999999999999999999999864321000 0
Q ss_pred HHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047 331 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
..+... ....+|++|++++||+|+++++|+|+++++|+++.
T Consensus 260 ------~~~~~~---------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 260 ------SKPDGT---------------PRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred ------CCCCcc---------------cccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 000000 02347999999899999999999999999999865
No 31
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=100.00 E-value=4.3e-31 Score=245.89 Aligned_cols=288 Identities=13% Similarity=0.064 Sum_probs=186.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV 103 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~ 103 (396)
|+||||||+||||++|+++|++ +| +|++++|... .+.+|++|++.+.+++++ +|.|+|||+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~-----~g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAP-----LG-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhc-----cC-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4799999999999999999998 77 6999988632 346899999999998884 7889999986
Q ss_pred ccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047 104 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 181 (396)
Q Consensus 104 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~ 181 (396)
..... .++...+++|+.++.+|+++|++.+ . +++++||..+|++. ...|++|+++..|... |+.
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~-~~v~~Ss~~Vy~~~---------~~~p~~E~~~~~P~~~--Yg~ 130 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--A-WVVHYSTDYVFPGT---------GDIPWQETDATAPLNV--YGE 130 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEccceEECCC---------CCCCcCCCCCCCCCCH--HHH
Confidence 55432 2566778999999999999999875 2 57777766655432 1457889888666544 877
Q ss_pred HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC--ccccceeeecccHHHHHHHH
Q 016047 182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT--KAAWECYSIASDADLIAEHQ 259 (396)
Q Consensus 182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~--~~~~~~~~~~~da~~la~~~ 259 (396)
.|+..|........+++++||++|||+ +. .++...+. .... .+.++.+.|+ +.+.... ++ +++++.++
T Consensus 131 sK~~~E~~~~~~~~~~~ilR~~~vyGp--~~-~~~~~~~~---~~~~-~~~~~~v~~d~~g~~~~~~-~~--~d~~~~~~ 200 (299)
T PRK09987 131 TKLAGEKALQEHCAKHLIFRTSWVYAG--KG-NNFAKTML---RLAK-EREELSVINDQFGAPTGAE-LL--ADCTAHAI 200 (299)
T ss_pred HHHHHHHHHHHhCCCEEEEecceecCC--CC-CCHHHHHH---HHHh-cCCCeEEeCCCcCCCCCHH-HH--HHHHHHHH
Confidence 666655543334457899999999994 32 13332221 1111 2445555554 2222222 22 22334444
Q ss_pred HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCc
Q 016047 260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP 339 (396)
Q Consensus 260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (396)
..++.. ...+++||+++++.+|+.|+++.+.+.++......+.. .-.+.+... +....
T Consensus 201 ~~~~~~-~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~------~i~~~~~~~---------------~~~~~ 258 (299)
T PRK09987 201 RVALNK-PEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALN------KLNAVPTSA---------------YPTPA 258 (299)
T ss_pred HHhhcc-CCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcC------eeeecchhh---------------cCCCC
Confidence 433332 22346999999999999999999988654321100000 000111110 11000
Q ss_pred ccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047 340 TRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~ 391 (396)
.+ -.+..+|++|+++ +||+| .+++++|+++++.+..
T Consensus 259 ---~r------------p~~~~ld~~k~~~~lg~~~-~~~~~~l~~~~~~~~~ 295 (299)
T PRK09987 259 ---RR------------PHNSRLNTEKFQQNFALVL-PDWQVGVKRMLTELFT 295 (299)
T ss_pred ---CC------------CCcccCCHHHHHHHhCCCC-ccHHHHHHHHHHHHhh
Confidence 00 0144689999998 69997 5999999999987643
No 32
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=100.00 E-value=1.1e-30 Score=246.76 Aligned_cols=319 Identities=17% Similarity=0.133 Sum_probs=208.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 104 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~ 104 (396)
++||||||+||||++|++.|++ .|++|++++|++.... ....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLE-----QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHH-----CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 4799999999999999999998 8999999999765421 122368899999999999999999999999998753
Q ss_pred cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC-CcchhH--
Q 016047 105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTL-- 181 (396)
Q Consensus 105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~-~~~y~~-- 181 (396)
.....++...+++|+.++.+++++|++.+ +++++++||..+|+.. +...+.+|+.+..+.. ...|+.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~--------~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVR--------GDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcC--------CCCCCcCccCCCCcccccChHHHHH
Confidence 32334567788999999999999998764 6788888765544321 1235678887765532 224653
Q ss_pred ---HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047 182 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 258 (396)
Q Consensus 182 ---e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 258 (396)
|+++.++. ...+++++++||+.+||++....... ..+. ..... ...+ .+.+.+ ..++++.| +|++
T Consensus 146 ~~~e~~~~~~~-~~~~~~~~ilR~~~~~G~~~~~~~~~-~~~~--~~~~~-~~~~-~~~~~~---~~~i~v~D---~a~a 213 (328)
T TIGR03466 146 FLAEQAALEMA-AEKGLPVVIVNPSTPIGPRDIKPTPT-GRII--VDFLN-GKMP-AYVDTG---LNLVHVDD---VAEG 213 (328)
T ss_pred HHHHHHHHHHH-HhcCCCEEEEeCCccCCCCCCCCCcH-HHHH--HHHHc-CCCc-eeeCCC---cceEEHHH---HHHH
Confidence 66666654 45689999999999999543222111 1111 11111 1222 222222 24555544 4777
Q ss_pred HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047 259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ 338 (396)
Q Consensus 259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (396)
++.++.. ...++.||++ ++.+|++|+++.+.+.+|.+..... .+..+...+......+.. ..+..
T Consensus 214 ~~~~~~~-~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~ 278 (328)
T TIGR03466 214 HLLALER-GRIGERYILG-GENLTLKQILDKLAEITGRPAPRVK----------LPRWLLLPVAWGAEALAR---LTGKE 278 (328)
T ss_pred HHHHHhC-CCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCc----------CCHHHHHHHHHHHHHHHH---hcCCC
Confidence 7766654 3457788885 6889999999999999997644321 111111111111111211 11111
Q ss_pred cccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047 339 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI 394 (396)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~ 394 (396)
+ .+. .....+...++.+|++|+++ +||+|. +++++|+++++||++.|.
T Consensus 279 ~-~~~------~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~ 327 (328)
T TIGR03466 279 P-RVT------VDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGY 327 (328)
T ss_pred C-CCC------HHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCC
Confidence 1 000 00000111256689999986 699995 999999999999998875
No 33
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.98 E-value=5.3e-31 Score=241.56 Aligned_cols=249 Identities=21% Similarity=0.249 Sum_probs=173.5
Q ss_pred EEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC---CCC-CCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 29 LIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW---NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 29 LVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~---~~~-~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
|||||+||||++|+++|++ +| ++|+++++.+.... ... ...+++++|++|++++.++++++|.|+|+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~-----~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLE-----RGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHH-----CCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence 7999999999999999999 77 78999998765432 111 2334899999999999999999999999998
Q ss_pred eccCCC-ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047 103 VTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 181 (396)
Q Consensus 103 ~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~ 181 (396)
...... .+.+..+++|+.||+||+++|++.+ +++++|+||..++... ..+. +-...+|+.|..+.....|+.
T Consensus 76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~--VkrlVytSS~~vv~~~--~~~~---~~~~~dE~~~~~~~~~~~Y~~ 148 (280)
T PF01073_consen 76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG--VKRLVYTSSISVVFDN--YKGD---PIINGDEDTPYPSSPLDPYAE 148 (280)
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcCcceeEec--cCCC---CcccCCcCCcccccccCchHH
Confidence 654433 3577789999999999999999864 8999999876655421 0010 011235555543333445775
Q ss_pred -----HHHHHHHhhc---C--CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeeccc
Q 016047 182 -----EDILFEEVEK---K--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASD 251 (396)
Q Consensus 182 -----e~~l~~~~~~---~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~d 251 (396)
|+++.++. . + ..+.+++|||..|||++........... .+ .+......|.+.....++++.+
T Consensus 149 SK~~AE~~V~~a~-~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~------~~-~g~~~~~~g~~~~~~~~vyV~N 220 (280)
T PF01073_consen 149 SKALAEKAVLEAN-GSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM------VR-SGLFLFQIGDGNNLFDFVYVEN 220 (280)
T ss_pred HHHHHHHHHHhhc-ccccccccceeEEEEeccEEeCcccccccchhhHH------HH-hcccceeecCCCceECcEeHHH
Confidence 55555543 1 1 2499999999999994332222221111 11 2323344565554444554444
Q ss_pred HHHHHHHHHHHhc---C----CCCCCceeeecCCCeee-HHHHHHHHHHHhCCCCCC
Q 016047 252 ADLIAEHQIWAAV---D----PYAKNEAFNCNNGDVFK-WKHLWKVLAEQFGIEDYG 300 (396)
Q Consensus 252 a~~la~~~i~~~~---~----~~~~g~~~ni~~~~~~s-~~el~~~l~~~~g~~~~~ 300 (396)
+|.+++.++. + ....|++|+|++++++. +.|++..+.+.+|.+.+.
T Consensus 221 ---vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 221 ---VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred ---HHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 4777777653 1 34679999999999998 999999999999988764
No 34
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.98 E-value=1.6e-30 Score=247.95 Aligned_cols=312 Identities=14% Similarity=0.158 Sum_probs=198.4
Q ss_pred ccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHH
Q 016047 17 EDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAK 90 (396)
Q Consensus 17 ~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~ 90 (396)
++++.++. ++||||||+||||++|+++|++ +|++|++++|++... +....+++++.+|+.|++.+.++
T Consensus 3 ~~~~~~~~-~~vLVtG~~GfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 76 (353)
T PLN02896 3 LEGRESAT-GTYCVTGATGYIGSWLVKLLLQ-----RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA 76 (353)
T ss_pred ccccccCC-CEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH
Confidence 34444443 5899999999999999999999 899999999875321 11124688999999999999999
Q ss_pred HhcCCCeeEEEEeccCCC----ccHHH-----HHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047 91 LSQLTDVTHIFYVTWTNR----STEAE-----NCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 91 ~~~~~~V~h~a~~~~~~~----~~~~~-----~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+.++|.|+|+|+...... .++.. .+++|+.|+.+++++|++.. .+++|+++||..+|+... .-|. .
T Consensus 77 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~-~~~~---~ 151 (353)
T PLN02896 77 VKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKD-SNGR---W 151 (353)
T ss_pred HcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccc-cCCC---C
Confidence 999999999998643321 12332 44566799999999998763 367888888766664210 0000 0
Q ss_pred CCCccCCCC--CC----C-CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhh
Q 016047 162 DPPFTEDMP--RL----D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH 229 (396)
Q Consensus 162 ~~p~~E~~p--~~----~-~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~ 229 (396)
..+++|+.+ .. + .+...|+. |+++..+. +..+++++++||++|||+......+.. +...+...
T Consensus 152 ~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~--~~~~~~~~-- 226 (353)
T PLN02896 152 RAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYA-KENGIDLVSVITTTVAGPFLTPSVPSS--IQVLLSPI-- 226 (353)
T ss_pred CCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHH-HHcCCeEEEEcCCcccCCCcCCCCCch--HHHHHHHh--
Confidence 134556522 10 0 12223664 55666554 667899999999999995322111111 11111101
Q ss_pred cCCC--ceecCCccc---cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCch
Q 016047 230 EGIP--LRFPGTKAA---WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE 304 (396)
Q Consensus 230 ~~~~--~~~~g~~~~---~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~ 304 (396)
.+.+ ....+.... .++++|+.|+ |++++.++..+. .+++||+ ++..+|++|+++.+.+.++.....+.
T Consensus 227 ~g~~~~~~~~~~~~~~~~~~dfi~v~Dv---a~a~~~~l~~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~-- 299 (353)
T PLN02896 227 TGDSKLFSILSAVNSRMGSIALVHIEDI---CDAHIFLMEQTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVR-- 299 (353)
T ss_pred cCCccccccccccccccCceeEEeHHHH---HHHHHHHHhCCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccc--
Confidence 1221 111111111 1356666555 777777765433 3456865 56789999999999998863211100
Q ss_pred hhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHH
Q 016047 305 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFIT 384 (396)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~ 384 (396)
+. +....+ + ....|.+|++++||+|+++++++|++
T Consensus 300 ------------------------------~~--~~~~~~---~----------~~~~~~~~~~~lGw~p~~~l~~~i~~ 334 (353)
T PLN02896 300 ------------------------------LD--EEKRGS---I----------PSEISSKKLRDLGFEYKYGIEEIIDQ 334 (353)
T ss_pred ------------------------------cc--ccccCc---c----------ccccCHHHHHHcCCCccCCHHHHHHH
Confidence 00 000000 0 12358999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q 016047 385 WIDKVKGFKIVP 396 (396)
Q Consensus 385 ~~~~~~~~~~~~ 396 (396)
+++|+++.+.+|
T Consensus 335 ~~~~~~~~~~~~ 346 (353)
T PLN02896 335 TIDCCVDHGFLP 346 (353)
T ss_pred HHHHHHHCCCCC
Confidence 999999988764
No 35
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.2e-30 Score=243.02 Aligned_cols=296 Identities=20% Similarity=0.210 Sum_probs=209.6
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC-CCeeEEEEecc
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL-TDVTHIFYVTW 105 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-~~V~h~a~~~~ 105 (396)
+|||||||||||++|+++|++ +||+|++++|..........++.++.+|+.+.+.+.+++..+ |.|+|+|+...
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~ 76 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLA-----AGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS 76 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHh-----CCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence 499999999999999999999 899999999976543221246789999999998888888888 89999998765
Q ss_pred CCCc---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC-CCCCCCCCcchhH
Q 016047 106 TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED-MPRLDAPNFYYTL 181 (396)
Q Consensus 106 ~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~-~p~~~~~~~~y~~ 181 (396)
.... ++.+.+++|+.||.+++++|++. .+++++++||..+|+.. ....+++|+ .|..|.. .|+.
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~--------~~~~~~~E~~~~~~p~~--~Yg~ 144 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGD--------PPPLPIDEDLGPPRPLN--PYGV 144 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCC--------CCCCCcccccCCCCCCC--HHHH
Confidence 4433 24568999999999999999984 48888886654444321 123467887 4555544 4664
Q ss_pred -----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch--hHHHHHHHHHHhhhcCCC-ceecCCccccceeeecccHH
Q 016047 182 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN--LVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASDAD 253 (396)
Q Consensus 182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~da~ 253 (396)
|+++.++. +..+++++++||+.|||++...... +...+. . ....+.+ ..+.+++.+.+.++++.|+
T Consensus 145 sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~i~v~D~- 218 (314)
T COG0451 145 SKLAAEQLLRAYA-RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFI--R--QLLKGEPIIVIGGDGSQTRDFVYVDDV- 218 (314)
T ss_pred HHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHH--H--HHHhCCCcceEeCCCceeEeeEeHHHH-
Confidence 66666655 4568999999999999944322111 111111 1 1122444 4566666666677776665
Q ss_pred HHHHHHHHHhcCCCCCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHH
Q 016047 254 LIAEHQIWAAVDPYAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV 332 (396)
Q Consensus 254 ~la~~~i~~~~~~~~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (396)
+.+++.++.++... +||++++. ..+++|+++.+.+.+|.....+.. ...
T Consensus 219 --a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-----------~~~--------------- 268 (314)
T COG0451 219 --ADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY-----------IPL--------------- 268 (314)
T ss_pred --HHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceee-----------cCC---------------
Confidence 77777777654444 89999987 899999999999999987542100 000
Q ss_pred HHhCCCcccccccccceeehhhhcCcccccchhhHh-hcCCCccccCHHHHHHHHHHHhhCC
Q 016047 333 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFK 393 (396)
Q Consensus 333 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~~~~~~ 393 (396)
.... .......+|.+|++ ++||.|+.++++++.++++|+....
T Consensus 269 -----~~~~-------------~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 269 -----GRRG-------------DLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred -----CCCC-------------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 0000 00114457999998 5799999999999999999987654
No 36
>PLN00016 RNA-binding protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=251.04 Aligned_cols=293 Identities=18% Similarity=0.149 Sum_probs=197.1
Q ss_pred cCCCCCCEEEEE----cCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C----------CCCCeeEEEecCCC
Q 016047 20 PARSYQSVALIV----GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N----------ADHLVEYVQCDVSD 83 (396)
Q Consensus 20 ~~~~~~~~iLVt----GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~----------~~~~v~~~~~Dl~d 83 (396)
.+-.|+++|||| |||||||++|+++|++ .||+|++++|++.... . ...+++++.+|+.|
T Consensus 47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d 121 (378)
T PLN00016 47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVK-----AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD 121 (378)
T ss_pred hcccccceEEEEeccCCCceeEhHHHHHHHHH-----CCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH
Confidence 344566899999 9999999999999999 8999999999864310 0 12358899999877
Q ss_pred hHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047 84 PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 84 ~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.+.+. ...++|.|+|+++. ++.++++++++|++.+ +++|+++||..+| |.. ...
T Consensus 122 ~~~~~-~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~g--vkr~V~~SS~~vy-------g~~--~~~ 175 (378)
T PLN00016 122 VKSKV-AGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPG--LKQFLFCSSAGVY-------KKS--DEP 175 (378)
T ss_pred HHhhh-ccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcC--CCEEEEEccHhhc-------CCC--CCC
Confidence 33222 22467888887431 2457889999999765 7899988866555 421 134
Q ss_pred CccCCCCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047 164 PFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW 243 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 243 (396)
|..|+++..|.. .....|+++ ++.+++++++||+++||+ +........+. ..+. .+.++.++|++.+.
T Consensus 176 p~~E~~~~~p~~-sK~~~E~~l-----~~~~l~~~ilRp~~vyG~--~~~~~~~~~~~--~~~~--~~~~i~~~g~g~~~ 243 (378)
T PLN00016 176 PHVEGDAVKPKA-GHLEVEAYL-----QKLGVNWTSFRPQYIYGP--GNNKDCEEWFF--DRLV--RGRPVPIPGSGIQL 243 (378)
T ss_pred CCCCCCcCCCcc-hHHHHHHHH-----HHcCCCeEEEeceeEECC--CCCCchHHHHH--HHHH--cCCceeecCCCCee
Confidence 566776655432 223344443 345899999999999994 33222222221 1111 25566777877776
Q ss_pred ceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhcc
Q 016047 244 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG 323 (396)
Q Consensus 244 ~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (396)
+.++|+.|+ |++++.++.++...+++||+++++.+|+.|+++.+++.+|.+.... ..+...+ .
T Consensus 244 ~~~i~v~Dv---a~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~------------~~~~~~~--~ 306 (378)
T PLN00016 244 TQLGHVKDL---ASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIV------------HYDPKAV--G 306 (378)
T ss_pred eceecHHHH---HHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCcee------------ecCcccc--C
Confidence 677766665 7777777766556679999999999999999999999999764221 1111000 0
Q ss_pred chHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCC
Q 016047 324 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV 395 (396)
Q Consensus 324 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~ 395 (396)
.+... . +++ ....+.+|++|+++ +||+|+++++|+|+++++||++.|.+
T Consensus 307 -----------~~~~~-~------~p~-----~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 307 -----------FGAKK-A------FPF-----RDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred -----------ccccc-c------ccc-----cccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 00000 0 000 00134579999987 69999999999999999999988764
No 37
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.97 E-value=2.3e-30 Score=243.06 Aligned_cols=292 Identities=11% Similarity=0.102 Sum_probs=190.6
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh----cCCCeeEEEE
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIFY 102 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~V~h~a~ 102 (396)
|||||||||||++|+++|++ .|+ +|++++|..............+.+|+.+.+.++.+.. ++|.|+|+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNE-----RGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHH-----cCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 69999999999999999998 787 7888887543221110112356788888877766553 7899999998
Q ss_pred eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC-CCCCcchhH
Q 016047 103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL-DAPNFYYTL 181 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~-~~~~~~y~~ 181 (396)
.......++...+++|+.++.+++++|++.+ + +++++||..+ ||.. ..+++|+++.. |.. .|+.
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~-~~v~~SS~~v-------y~~~---~~~~~e~~~~~~p~~--~Y~~ 140 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKG--I-PFIYASSAAT-------YGDG---EAGFREGRELERPLN--VYGY 140 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHhC--C-cEEEEccHHh-------cCCC---CCCcccccCcCCCCC--HHHH
Confidence 6443334667788999999999999999864 3 5777775544 4432 33456665432 333 3664
Q ss_pred -----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcc---hhHHHHHHHHHHhhhcCCCceec------CCcccccee
Q 016047 182 -----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFP------GTKAAWECY 246 (396)
Q Consensus 182 -----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~------g~~~~~~~~ 246 (396)
|+++.++..+ ..+++++++||+.|||+...... ++...+. ..+. .+.++... +++.+.+++
T Consensus 141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~~~~~ 216 (314)
T TIGR02197 141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLF--NQIK--AGGNVKLFKSSEGFKDGEQLRDF 216 (314)
T ss_pred HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHH--HHHh--cCCCeEEecCccccCCCCceeee
Confidence 4555443212 34579999999999995422111 1111111 1111 23333322 455666777
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047 247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 326 (396)
Q Consensus 247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (396)
+|+.|+ +++++.++.. ..+++||++++.++|++|+++.+.+.+|.+... . ..+.+.
T Consensus 217 i~v~D~---a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~-~-----------~~~~~~------- 272 (314)
T TIGR02197 217 VYVKDV---VDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKI-E-----------YIPMPE------- 272 (314)
T ss_pred EEHHHH---HHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcc-e-----------eccCcc-------
Confidence 777776 7776666654 456799999999999999999999999965321 0 000000
Q ss_pred HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhc-CCCccccCHHHHHHHHHHHhh
Q 016047 327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDKVKG 391 (396)
Q Consensus 327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~~~~ 391 (396)
..... + ......|++|++++ ||+|+++++|+|+++++|+++
T Consensus 273 -------------~~~~~---~--------~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~~ 314 (314)
T TIGR02197 273 -------------ALRGK---Y--------QYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLLA 314 (314)
T ss_pred -------------ccccc---c--------ccccccchHHHHHhcCCCCcccHHHHHHHHHHHHhC
Confidence 00000 0 00234699999975 999999999999999999863
No 38
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.97 E-value=6.1e-30 Score=237.13 Aligned_cols=280 Identities=16% Similarity=0.159 Sum_probs=191.1
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEec
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT 104 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~~ 104 (396)
+|||||||||||++++++|++ +||+|++++|. .+|+.+++++.++++++ |.|+|+++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~-----~g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSP-----EGRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHh-----cCCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence 589999999999999999999 89999999885 57999999999999886 8899998754
Q ss_pred cCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHH
Q 016047 105 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE 182 (396)
Q Consensus 105 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e 182 (396)
.... ..+...+++|+.++.+++++|++.+ . +++++||..+|+.. ...|++|+++..|.. .|+..
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~Ss~~vy~~~---------~~~~~~E~~~~~~~~--~Y~~~ 127 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHG--A-RLVHISTDYVFDGE---------GKRPYREDDATNPLN--VYGQS 127 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeeeeecCC---------CCCCCCCCCCCCCcc--hhhHH
Confidence 3321 2456778999999999999998764 2 67777765555321 245788888765543 47776
Q ss_pred HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 016047 183 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA 262 (396)
Q Consensus 183 ~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~ 262 (396)
|...+......+++++++||+.|||+. ...++...+... +. .+.++...++ ++..++++.| +|.+++.+
T Consensus 128 K~~~E~~~~~~~~~~~ilR~~~v~G~~--~~~~~~~~~~~~--~~--~~~~~~~~~~--~~~~~v~v~D---va~a~~~~ 196 (287)
T TIGR01214 128 KLAGEQAIRAAGPNALIVRTSWLYGGG--GGRNFVRTMLRL--AG--RGEELRVVDD--QIGSPTYAKD---LARVIAAL 196 (287)
T ss_pred HHHHHHHHHHhCCCeEEEEeeecccCC--CCCCHHHHHHHH--hh--cCCCceEecC--CCcCCcCHHH---HHHHHHHH
Confidence 666554434557899999999999954 323332222111 11 1334444443 3344555444 47777777
Q ss_pred hcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047 263 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL 342 (396)
Q Consensus 263 ~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 342 (396)
+..+...+++||+++++.+|+.|+++.+++.+|.+....+. +. +.... ...+. . +.
T Consensus 197 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~~---~~~~~------~~~~~--~-~~ 252 (287)
T TIGR01214 197 LQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHP------------QE---VKPIS------SKEYP--R-PA 252 (287)
T ss_pred HhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccC------------ce---eEeec------HHHcC--C-CC
Confidence 76544568899999999999999999999999976532110 00 00000 00000 0 00
Q ss_pred cccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHH
Q 016047 343 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID 387 (396)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~ 387 (396)
.. .....+|++|+|+ +|| +.++++++|+++++
T Consensus 253 ~~------------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 253 RR------------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ 285 (287)
T ss_pred CC------------CCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence 00 0134589999998 599 57899999998875
No 39
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.97 E-value=8.3e-30 Score=226.33 Aligned_cols=300 Identities=17% Similarity=0.141 Sum_probs=213.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~ 93 (396)
+.++||||||+||||+|.+-+|++ +||.|++++.-.... .....++.++++|+.|.+.+++.++.
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~~-----~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~ 75 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALLK-----RGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE 75 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHHh-----CCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence 457999999999999999999999 899999999743211 11236899999999999999999876
Q ss_pred --CCCeeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047 94 --LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 169 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~ 169 (396)
.|.|+|+|+......+ ++......|+.||.+||++|++++ +++++++||.. +||. +...|++|+.
T Consensus 76 ~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssat-------vYG~--p~~ip~te~~ 144 (343)
T KOG1371|consen 76 VKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSAT-------VYGL--PTKVPITEED 144 (343)
T ss_pred cCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEeccee-------eecC--cceeeccCcC
Confidence 4569999988776544 678888999999999999999986 88888887655 5554 3468999999
Q ss_pred CCC-CCCCc---chhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCC---------cchhHHHHHHHHHHhhh-----cC
Q 016047 170 PRL-DAPNF---YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKH-----EG 231 (396)
Q Consensus 170 p~~-~~~~~---~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~-----~~ 231 (396)
|.. |.+++ .|..|+++..+. ...++.++.||..+++|..|.. ..+... .....++-+. .+
T Consensus 145 ~t~~p~~pyg~tK~~iE~i~~d~~-~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g 222 (343)
T KOG1371|consen 145 PTDQPTNPYGKTKKAIEEIIHDYN-KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVG 222 (343)
T ss_pred CCCCCCCcchhhhHHHHHHHHhhh-ccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeec
Confidence 887 55552 233477777665 5566999999999999954321 112211 1111111111 12
Q ss_pred CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCC
Q 016047 232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGG 309 (396)
Q Consensus 232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~ 309 (396)
.+.... ++...+..+++.|. |+.++.++.... ..-++||++++...++.+|...+.+.+|.+.+...
T Consensus 223 ~d~~t~-dgt~vrdyi~v~Dl---a~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~------- 291 (343)
T KOG1371|consen 223 RDYTTI-DGTIVRDYIHVLDL---ADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV------- 291 (343)
T ss_pred Cccccc-CCCeeecceeeEeh---HHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc-------
Confidence 332222 22444556666665 777777665433 23459999999999999999999999998865410
Q ss_pred CCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHh-hcCCCccccCHHHHHHHHHH
Q 016047 310 GGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDK 388 (396)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~ 388 (396)
+ +.++.+. ..++.+.++++ ||||+|.+++++++++..+|
T Consensus 292 -----v--------------------~~R~gdv---------------~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W 331 (343)
T KOG1371|consen 292 -----V--------------------PRRNGDV---------------AFVYANPSKAQRELGWKAKYGLQEMLKDLWRW 331 (343)
T ss_pred -----c--------------------CCCCCCc---------------eeeeeChHHHHHHhCCccccCHHHHHHHHHHH
Confidence 0 0011111 14567888886 68999999999999999999
Q ss_pred HhhC
Q 016047 389 VKGF 392 (396)
Q Consensus 389 ~~~~ 392 (396)
+...
T Consensus 332 ~~~n 335 (343)
T KOG1371|consen 332 QKQN 335 (343)
T ss_pred HhcC
Confidence 9765
No 40
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.97 E-value=3.9e-29 Score=230.61 Aligned_cols=328 Identities=16% Similarity=0.136 Sum_probs=211.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-CCC------CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~~------~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
+.++|||||+||+|.||+.+|+++. ...+|++++..+.. .+. ....++++++|+.|...+..+++++ .|
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~---~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENE---LKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcc---cccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence 3689999999999999999999842 13789999987652 221 1467889999999999999999999 89
Q ss_pred eEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047 98 THIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP 175 (396)
Q Consensus 98 ~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~ 175 (396)
+|||+....... +++..+++||.||+|++++|.+.+ +++++++||..+..... + ....+|+.|.....
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~--v~~lIYtSs~~Vvf~g~-------~-~~n~~E~~p~p~~~ 149 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG--VKRLIYTSSAYVVFGGE-------P-IINGDESLPYPLKH 149 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhC--CCEEEEecCceEEeCCe-------e-cccCCCCCCCcccc
Confidence 999875443322 478889999999999999999986 89999988766553221 1 12234444432211
Q ss_pred CcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce---ee
Q 016047 176 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC---YS 247 (396)
Q Consensus 176 ~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~---~~ 247 (396)
...|+. |+++.++. ...++..+++||..|||++..........+ .+ .+..+-..|....+.. ..
T Consensus 150 ~d~Y~~sKa~aE~~Vl~an-~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~------~~-~g~~~f~~g~~~~~~~~~~~~ 221 (361)
T KOG1430|consen 150 IDPYGESKALAEKLVLEAN-GSDDLYTCALRPPGIYGPGDKRLLPKIVEA------LK-NGGFLFKIGDGENLNDFTYGE 221 (361)
T ss_pred ccccchHHHHHHHHHHHhc-CCCCeeEEEEccccccCCCCccccHHHHHH------HH-ccCceEEeeccccccceEEec
Confidence 123664 56666543 345599999999999994332222211111 11 2322222343333333 33
Q ss_pred ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047 248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV 327 (396)
Q Consensus 248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (396)
.++.+..+|...+.. ..+...|+.|+|.++.++...+++..+.+.+|...+.... .|..+..+++-..+.
T Consensus 222 Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~---------~p~~l~~~~~~l~e~ 291 (361)
T KOG1430|consen 222 NVAWAHILAARALLD-KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIK---------LPLFLSYFLAYLLEI 291 (361)
T ss_pred hhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceee---------cchHHHHHHHHHHHH
Confidence 344444444332221 4566789999999999988888888999999987662111 455555555543322
Q ss_pred HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047 328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK 393 (396)
Q Consensus 328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~ 393 (396)
-..+... . ...+.. + ...+......+|++||++ |||.|..++++++++++.|+..+.
T Consensus 292 ~~~~l~p--~-~p~lt~-----~-~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~ 349 (361)
T KOG1430|consen 292 VYFLLRP--Y-QPILTR-----F-RVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASES 349 (361)
T ss_pred HHHhccC--C-CCCcCh-----h-heeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence 2222211 1 111111 0 001111255689999985 699999999999999999886543
No 41
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.97 E-value=2.7e-28 Score=230.16 Aligned_cols=296 Identities=18% Similarity=0.143 Sum_probs=197.3
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCC---CCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNA---DHLVEYVQCDVSDPEETQAKLS--QLTDVT 98 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~---~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~ 98 (396)
+|||||||||||++|+++|++ .|++|++++|..... ... ..+++.+.+|+.+++++.+++. .+|.|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLE-----SGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHh-----CCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 589999999999999999998 799999887643221 110 0156788999999999998886 578899
Q ss_pred EEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047 99 HIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN 176 (396)
Q Consensus 99 h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~ 176 (396)
|+|+...... .++.+.++.|+.++.+++++|.+.+ +++++++||..+| |.. ...+++|+++..+...
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~ss~~~~-------g~~--~~~~~~e~~~~~~~~~ 144 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG--VKKFIFSSSAAVY-------GEP--SSIPISEDSPLGPINP 144 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC--CCEEEEecchhhc-------CCC--CCCCccccCCCCCCCc
Confidence 9987543221 2456678999999999999998764 5688887765544 321 1346788877665444
Q ss_pred cchh-----HHHHHHHHhhcC-CCeeEEEEcCCceeecCCCCcc----hhHHHHHHHH-HHhhhcCCCceecC------C
Q 016047 177 FYYT-----LEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLM----NLVGALCVYA-AVCKHEGIPLRFPG------T 239 (396)
Q Consensus 177 ~~y~-----~e~~l~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~-~i~~~~~~~~~~~g------~ 239 (396)
|+ .|.++..+. +. .+++++++||+.+||+.+.... .....+..++ ....+...++...| +
T Consensus 145 --y~~sK~~~e~~~~~~~-~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
T TIGR01179 145 --YGRSKLMSERILRDLS-KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD 221 (328)
T ss_pred --hHHHHHHHHHHHHHHH-HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence 54 366666654 44 7899999999999996543210 0011111111 11111222322222 3
Q ss_pred ccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047 240 KAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL 317 (396)
Q Consensus 240 ~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
+.+.+.++++.|+ +++++.++.. ....+++||++++..+|++||++.+++.+|.+..... ..
T Consensus 222 g~~~~~~v~~~D~---a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~------------~~- 285 (328)
T TIGR01179 222 GTCVRDYIHVMDL---ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL------------AP- 285 (328)
T ss_pred CceEEeeeeHHHH---HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe------------CC-
Confidence 3444566666666 5665555432 2245789999999999999999999999987643200 00
Q ss_pred HHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCcccc-CHHHHHHHHHHHhh
Q 016047 318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKG 391 (396)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~~~~~~~~~~~~~ 391 (396)
...... ....+|++|+++ +||+|.++ ++++++++++|+++
T Consensus 286 -------------------~~~~~~---------------~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~ 327 (328)
T TIGR01179 286 -------------------RRPGDP---------------ASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESR 327 (328)
T ss_pred -------------------CCCccc---------------cchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhc
Confidence 000000 023469999986 69999998 99999999999875
No 42
>PLN02686 cinnamoyl-CoA reductase
Probab=99.96 E-value=3.4e-28 Score=232.45 Aligned_cols=254 Identities=14% Similarity=0.135 Sum_probs=167.6
Q ss_pred cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-------CCCCeeEEEecCCChHHH
Q 016047 20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-------ADHLVEYVQCDVSDPEET 87 (396)
Q Consensus 20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~~~~v~~~~~Dl~d~~~~ 87 (396)
....++|+||||||+||||++|+++|++ +||+|++++|+.... .. ...+++++.+|++|++++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~-----~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l 122 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLR-----HGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESL 122 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHH
Confidence 3456678999999999999999999999 899999988864221 00 012578899999999999
Q ss_pred HHHHhcCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC--C
Q 016047 88 QAKLSQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD--P 163 (396)
Q Consensus 88 ~~~~~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~--~ 163 (396)
.++++++|.|+|+++...... .......++|+.++.+++++|++.. ++++++++||... .+||...+.. .
T Consensus 123 ~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~-----~vyg~~~~~~~~~ 196 (367)
T PLN02686 123 HEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLA-----CVWRQNYPHDLPP 196 (367)
T ss_pred HHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHH-----hcccccCCCCCCc
Confidence 999999999999988643322 1224556889999999999998752 3788888886420 1333211111 2
Q ss_pred CccCCCCCC----CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047 164 PFTEDMPRL----DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 234 (396)
Q Consensus 164 p~~E~~p~~----~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 234 (396)
+++|+.+.. +.+...|+. |+++..+. +..+++++++||++|||++...... ..+. .... +. +
T Consensus 197 ~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~-~~~gl~~v~lRp~~vyGp~~~~~~~--~~~~---~~~~--g~-~ 267 (367)
T PLN02686 197 VIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA-RGKGLKLATICPALVTGPGFFRRNS--TATI---AYLK--GA-Q 267 (367)
T ss_pred ccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH-HhcCceEEEEcCCceECCCCCCCCC--hhHH---HHhc--CC-C
Confidence 345543221 112223664 66665554 5679999999999999953221111 1111 1111 22 2
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047 235 RFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299 (396)
Q Consensus 235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~ 299 (396)
.+.|++. ..++|+.| +|.+++.++.. +...+++| ++++..+|++|+++.+.+.+|.+..
T Consensus 268 ~~~g~g~--~~~v~V~D---va~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 268 EMLADGL--LATADVER---LAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN 328 (367)
T ss_pred ccCCCCC--cCeEEHHH---HHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence 3344443 23555555 47777777653 23456778 7788999999999999999987643
No 43
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.96 E-value=2.5e-28 Score=226.73 Aligned_cols=236 Identities=16% Similarity=0.137 Sum_probs=154.6
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEeccCC
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN 107 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~~~ 107 (396)
|||||||||||++|+++|++ +|++|++++|++...... .... ..|+.. ..+..++.++|.|+|+|+.....
T Consensus 1 vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~-~~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTK-----DGHEVTILTRSPPAGANT-KWEG--YKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHH-----cCCEEEEEeCCCCCCCcc-ccee--eecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 69999999999999999999 799999999986542110 0111 122222 44556778899999998754321
Q ss_pred --Cc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh---
Q 016047 108 --RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT--- 180 (396)
Q Consensus 108 --~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~--- 180 (396)
.. .+...+++|+.++++++++|++.+.+..+++++|++..| |.. ...+++|+.+..+.+ ++.
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~y-------g~~--~~~~~~E~~~~~~~~--~~~~~~ 140 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYY-------GTS--EDRVFTEEDSPAGDD--FLAELC 140 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEe-------CCC--CCCCcCcccCCCCCC--hHHHHH
Confidence 11 346678999999999999999875433456655554444 321 145677877543322 232
Q ss_pred --HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047 181 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 258 (396)
Q Consensus 181 --~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 258 (396)
.|+.+.. . ++.+++++++||+.|||+..+ ....+... .....+.+ .|++.+.++++++.|+ |++
T Consensus 141 ~~~e~~~~~-~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~--~~~~~~~~---~g~~~~~~~~i~v~Dv---a~~ 206 (292)
T TIGR01777 141 RDWEEAAQA-A-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPP--FRLGLGGP---LGSGRQWFSWIHIEDL---VQL 206 (292)
T ss_pred HHHHHHhhh-c-hhcCCceEEEeeeeEECCCcc----hhHHHHHH--HhcCcccc---cCCCCcccccEeHHHH---HHH
Confidence 2333332 2 456899999999999995322 11111110 11111211 4566666677766665 777
Q ss_pred HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047 259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~ 298 (396)
+..++..+. .+++||+++++.+|++||++.+++.+|.+.
T Consensus 207 i~~~l~~~~-~~g~~~~~~~~~~s~~di~~~i~~~~g~~~ 245 (292)
T TIGR01777 207 ILFALENAS-ISGPVNATAPEPVRNKEFAKALARALHRPA 245 (292)
T ss_pred HHHHhcCcc-cCCceEecCCCccCHHHHHHHHHHHhCCCC
Confidence 777776543 356899999999999999999999999754
No 44
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.96 E-value=2.1e-28 Score=229.85 Aligned_cols=295 Identities=13% Similarity=0.121 Sum_probs=187.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 104 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~ 104 (396)
|+|||||||||||++|+++|++ +||+|++++|++... .....+++++.+|+.|++++.++++++|.|+|+++.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~-----~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~- 74 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALD-----EGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS- 74 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC-
Confidence 4899999999999999999999 899999999986432 112247899999999999999999999999998642
Q ss_pred cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047 105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI 184 (396)
Q Consensus 105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~ 184 (396)
...++....++|+.++.|++++|++++ +++++++|+...+ .|+ ..+ |...|.
T Consensus 75 --~~~~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~-----~~~--------------~~~-----~~~~K~ 126 (317)
T CHL00194 75 --RPSDLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAE-----QYP--------------YIP-----LMKLKS 126 (317)
T ss_pred --CCCCccchhhhhHHHHHHHHHHHHHcC--CCEEEEecccccc-----ccC--------------CCh-----HHHHHH
Confidence 223345567899999999999999875 7889887642110 111 011 232222
Q ss_pred HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047 185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 264 (396)
Q Consensus 185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~ 264 (396)
..+.+.++.+++++++||+.+|+.- ...+. ..+. .+.++...+ +.+.+.++++.| +|++++.++.
T Consensus 127 ~~e~~l~~~~l~~tilRp~~~~~~~-------~~~~~--~~~~--~~~~~~~~~-~~~~~~~i~v~D---va~~~~~~l~ 191 (317)
T CHL00194 127 DIEQKLKKSGIPYTIFRLAGFFQGL-------ISQYA--IPIL--EKQPIWITN-ESTPISYIDTQD---AAKFCLKSLS 191 (317)
T ss_pred HHHHHHHHcCCCeEEEeecHHhhhh-------hhhhh--hhhc--cCCceEecC-CCCccCccCHHH---HHHHHHHHhc
Confidence 2222225578999999999887621 11110 0011 123433333 333445555555 4777777776
Q ss_pred CCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccc
Q 016047 265 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDE 344 (396)
Q Consensus 265 ~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 344 (396)
.+...+++||+++++.+|++|+++.+.+.+|.+..... .|..+..+.. .|.. .++..+ ....
T Consensus 192 ~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~----------vp~~~~~~~~----~~~~---~~~~~~-~~~~ 253 (317)
T CHL00194 192 LPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISR----------VPLFLLKLLR----QITG---FFEWTW-NISD 253 (317)
T ss_pred CccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEe----------CCHHHHHHHH----HHHh---hcccch-hhHH
Confidence 66667899999999999999999999999998643311 2222222221 1211 111100 0000
Q ss_pred cccceeehhhhcCcccccchhhHhh-cCCCcc--ccCHHHHHHHHHHH
Q 016047 345 VGAWWFVDLVLTGEAKLASMNKSKE-HGFSGF--RNSKNSFITWIDKV 389 (396)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~--~~~~~~~~~~~~~~ 389 (396)
...+....-...+..++.+++++ +|+.|. .++++.++++++..
T Consensus 254 --~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 299 (317)
T CHL00194 254 --RLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI 299 (317)
T ss_pred --HHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence 00000111111244567888887 599984 78999999887653
No 45
>PRK05865 hypothetical protein; Provisional
Probab=99.96 E-value=1.8e-27 Score=243.24 Aligned_cols=258 Identities=19% Similarity=0.263 Sum_probs=179.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 105 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~ 105 (396)
|+|||||||||||++++++|++ +|++|++++|+..... ..+++++.+|+.|.+++.++++++|.|+|+|+...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~-----~G~~Vv~l~R~~~~~~--~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~ 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLS-----QGHEVVGIARHRPDSW--PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCchhhc--ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc
Confidence 4799999999999999999999 8999999999754322 13688999999999999999999999999975321
Q ss_pred CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047 106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 185 (396)
Q Consensus 106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l 185 (396)
..+++|+.++.+++++|++.+ +++++++||. . ....|+++
T Consensus 74 -------~~~~vNv~GT~nLLeAa~~~g--vkr~V~iSS~----------------~---------------K~aaE~ll 113 (854)
T PRK05865 74 -------RNDHINIDGTANVLKAMAETG--TGRIVFTSSG----------------H---------------QPRVEQML 113 (854)
T ss_pred -------chHHHHHHHHHHHHHHHHHcC--CCeEEEECCc----------------H---------------HHHHHHHH
Confidence 146899999999999999864 6788876521 0 13345544
Q ss_pred HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047 186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 265 (396)
Q Consensus 186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~ 265 (396)
.+++++++++||++||| |+. .++.. .....++...|+..+.+.++|+.|+ |.+++.++..
T Consensus 114 -----~~~gl~~vILRp~~VYG--P~~-~~~i~---------~ll~~~v~~~G~~~~~~dfIhVdDV---A~Ai~~aL~~ 173 (854)
T PRK05865 114 -----ADCGLEWVAVRCALIFG--RNV-DNWVQ---------RLFALPVLPAGYADRVVQVVHSDDA---QRLLVRALLD 173 (854)
T ss_pred -----HHcCCCEEEEEeceEeC--CCh-HHHHH---------HHhcCceeccCCCCceEeeeeHHHH---HHHHHHHHhC
Confidence 24589999999999999 431 11111 1112232223444444567776665 7777666654
Q ss_pred CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCccccccc
Q 016047 266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEV 345 (396)
Q Consensus 266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 345 (396)
+...+++|||++++.+|++|+++.+.+... ... ......... ...+.
T Consensus 174 ~~~~ggvyNIgsg~~~Si~EIae~l~~~~~----~v~------------~~~~~~~~~---------------~~~~~-- 220 (854)
T PRK05865 174 TVIDSGPVNLAAPGELTFRRIAAALGRPMV----PIG------------SPVLRRVTS---------------FAELE-- 220 (854)
T ss_pred CCcCCCeEEEECCCcccHHHHHHHHhhhhc----cCC------------chhhhhccc---------------hhhhh--
Confidence 444578999999999999999998876431 100 000000000 00000
Q ss_pred ccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 346 GAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 346 ~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
.......+|++|+++ +||+|+++++++|+++++|++.+
T Consensus 221 ---------~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 221 ---------LLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred ---------cccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 000133579999986 69999999999999999999864
No 46
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=4.6e-27 Score=204.05 Aligned_cols=317 Identities=15% Similarity=0.123 Sum_probs=213.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
|.|+.||||-||+-|++|++.|++ +||+|+++.|+.... ...+++++++.||++|...+..+++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLe-----kGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLE-----KGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHh-----cCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 568999999999999999999999 899999999984321 1133468899999999999999999
Q ss_pred cCCC--eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047 93 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 168 (396)
Q Consensus 93 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~ 168 (396)
.+.+ |+|+|+.+++..+ +|....+++..||.+||+|++..+++-.+|.. .||++.||.. .+.|.+|+
T Consensus 76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQ-------AStSE~fG~v--~~~pq~E~ 146 (345)
T COG1089 76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQ-------ASTSELYGLV--QEIPQKET 146 (345)
T ss_pred hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEe-------cccHHhhcCc--ccCccccC
Confidence 8776 9999999887655 67788899999999999999987642233332 4677788875 37899999
Q ss_pred CCCCCCCCcchhHHHHHHHHh----hcCCCeeEEEEcCCceeecCCCCcchh-HHHHHHHHH-HhhhcCCCceecCCccc
Q 016047 169 MPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAA-VCKHEGIPLRFPGTKAA 242 (396)
Q Consensus 169 ~p~~~~~~~~y~~e~~l~~~~----~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~-i~~~~~~~~~~~g~~~~ 242 (396)
+|+.|.++ |+..|+..-.. .+.+|+-.+.=...+-=+ |...-.| ...+...++ |..++... .+.|+.+.
T Consensus 147 TPFyPrSP--YAvAKlYa~W~tvNYResYgl~AcnGILFNHES--P~Rge~FVTRKIt~ava~Ik~G~q~~-l~lGNldA 221 (345)
T COG1089 147 TPFYPRSP--YAVAKLYAYWITVNYRESYGLFACNGILFNHES--PLRGETFVTRKITRAVARIKLGLQDK-LYLGNLDA 221 (345)
T ss_pred CCCCCCCH--HHHHHHHHHheeeehHhhcCceeecceeecCCC--CCCccceehHHHHHHHHHHHccccce-EEeccccc
Confidence 99999777 88776665432 245565544433333323 4444344 234443333 44444433 67899888
Q ss_pred cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047 243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK 322 (396)
Q Consensus 243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (396)
.++|.+..|. +++ +|++.+... ++.|.|+.+...|++|++++..+..|....-.-. + ..| .-.+
T Consensus 222 kRDWG~A~DY---Ve~-mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~-g-~~e---~g~d------ 285 (345)
T COG1089 222 KRDWGHAKDY---VEA-MWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGT-G-VDE---KGVD------ 285 (345)
T ss_pred cccccchHHH---HHH-HHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeec-c-ccc---cccc------
Confidence 8877777665 555 444444333 6779999999999999999999999965321000 0 000 0000
Q ss_pred cchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047 323 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK 390 (396)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~ 390 (396)
...|-..-.++. .-+--.+ .+-.+.|.+||++ |||+|+++++|.++++++...
T Consensus 286 ----------a~~G~~~V~idp-~~fRPaE----V~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl 339 (345)
T COG1089 286 ----------AKTGKIIVEIDP-RYFRPAE----VDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADL 339 (345)
T ss_pred ----------cccCceeEEECc-cccCchh----hhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHH
Confidence 000100000000 0000000 0134579999995 799999999999999998754
No 47
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.95 E-value=8e-26 Score=233.09 Aligned_cols=253 Identities=16% Similarity=0.094 Sum_probs=165.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------CCCCCeeEEEecCCCh------HHHHHHHh
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDP------EETQAKLS 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~------~~~~~~~~ 92 (396)
|+|||||||||||++|+++|+++. .|++|++++|++.... ....+++++.+|+.|+ +.+.++ .
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRR---REATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcC---CCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 489999999999999999999411 6899999999653210 0124789999999984 345554 8
Q ss_pred cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047 93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 172 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~ 172 (396)
++|.|+|||+..... .++....++|+.|+.+++++|++.+ +++++++||..+|+.. ..+.+|+....
T Consensus 77 ~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~--~~~~v~~SS~~v~g~~----------~~~~~e~~~~~ 143 (657)
T PRK07201 77 DIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQ--AATFHHVSSIAVAGDY----------EGVFREDDFDE 143 (657)
T ss_pred CCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcC--CCeEEEEeccccccCc----------cCccccccchh
Confidence 899999999854332 3456678999999999999999864 5778877766555321 22334443211
Q ss_pred C-CCCcchhHHHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcc-hh--HHHHHHHHHHhhhcCCCceecCCccccceee
Q 016047 173 D-APNFYYTLEDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM-NL--VGALCVYAAVCKHEGIPLRFPGTKAAWECYS 247 (396)
Q Consensus 173 ~-~~~~~y~~e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~-~~--~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~ 247 (396)
+ .....|+..|...+.... ..+++++++||+.|||+...... +. ...+...+.........++..+.+.....++
T Consensus 144 ~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 223 (657)
T PRK07201 144 GQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIV 223 (657)
T ss_pred hcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeee
Confidence 1 112337765555443322 46899999999999996432211 11 0011111110011111122333333334455
Q ss_pred ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047 248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~ 298 (396)
++ ++++.+++.++..+...+++||+++++.+|++|+++.+++.+|.+.
T Consensus 224 ~v---ddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 224 PV---DYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred eH---HHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 44 4457787777766566789999999999999999999999999875
No 48
>PLN02583 cinnamoyl-CoA reductase
Probab=99.94 E-value=1.1e-25 Score=209.35 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=161.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+++|||||||||||++++++|++ +||+|++++|++... .. ...+++++.+|++|.+++.+++.+++
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~-----~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d 80 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLS-----RGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS 80 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence 46899999999999999999999 899999999863211 10 12368899999999999999999999
Q ss_pred CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc-cCCCCCCCccCCCCCCCC
Q 016047 96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG-KIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g-~~~~~~~p~~E~~p~~~~ 174 (396)
.|+|+++..........+.+++|+.|+.+++++|.+.. .+++++++||...+. ++ .......+++|+.+..+.
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~-----~~~~~~~~~~~~~E~~~~~~~ 154 (297)
T PLN02583 81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVI-----WRDDNISTQKDVDERSWSDQN 154 (297)
T ss_pred EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHhee-----cccccCCCCCCCCcccCCCHH
Confidence 99998653222122356789999999999999998752 367888888654331 22 111123456776543211
Q ss_pred ----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047 175 ----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC 245 (396)
Q Consensus 175 ----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 245 (396)
....|+. |+++.++. +..+++++++||+.|||+.. .... .+ .. +....+++ + ...
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~-~~~gi~~v~lrp~~v~Gp~~--~~~~--~~------~~--~~~~~~~~-~--~~~ 218 (297)
T PLN02583 155 FCRKFKLWHALAKTLSEKTAWALA-MDRGVNMVSINAGLLMGPSL--TQHN--PY------LK--GAAQMYEN-G--VLV 218 (297)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHH-HHhCCcEEEEcCCcccCCCC--CCch--hh------hc--CCcccCcc-c--Ccc
Confidence 1113664 55555554 45689999999999999432 1111 11 01 11111121 1 124
Q ss_pred eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047 246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI 296 (396)
Q Consensus 246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~ 296 (396)
++|+.| +|++++.++..+...+ .|+++++....+.++++++.+.+..
T Consensus 219 ~v~V~D---va~a~~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 219 TVDVNF---LVDAHIRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred eEEHHH---HHHHHHHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence 555544 5899888887655544 6999887666778899999988753
No 49
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.94 E-value=4.3e-27 Score=211.53 Aligned_cols=223 Identities=23% Similarity=0.310 Sum_probs=167.4
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC--CCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEe
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA--DHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV 103 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~ 103 (396)
|||||||||||++|+++|++ +|++|+.+.|++...... ..+++++.+|+.|.+.+.++++.. |.|+|+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLK-----KGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHH-----cCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 79999999999999999999 899999999987653210 127899999999999999999887 889999875
Q ss_pred ccC--CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047 104 TWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 181 (396)
Q Consensus 104 ~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~ 181 (396)
... ....+...++.|+.++.+++++|++.+ +++++++||.. +||.. ...+++|+.+..|... |+.
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~-------~y~~~--~~~~~~e~~~~~~~~~--Y~~ 142 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSAS-------VYGDP--DGEPIDEDSPINPLSP--YGA 142 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGG-------GGTSS--SSSSBETTSGCCHSSH--HHH
T ss_pred cccccccccccccccccccccccccccccccc--ccccccccccc-------ccccc--cccccccccccccccc--ccc
Confidence 321 112567788999999999999999875 47888777654 45532 2567889888755444 553
Q ss_pred -----HHHHHHHhhcCCCeeEEEEcCCceeecC-CCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047 182 -----EDILFEEVEKKEELSWSVHRPDTIFGFS-PYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 254 (396)
Q Consensus 182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~ 254 (396)
|+++.++. +..+++++++||+.|||+. +.. ...+...+.. ....+.++.+++++.+.++++|+.|+
T Consensus 143 ~K~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~-- 215 (236)
T PF01370_consen 143 SKRAAEELLRDYA-KKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIR----QALKGKPIKIPGDGSQVRDFIHVDDL-- 215 (236)
T ss_dssp HHHHHHHHHHHHH-HHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHH----HHHTTSSEEEESTSSCEEEEEEHHHH--
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccccchhhH----HhhcCCcccccCCCCCccceEEHHHH--
Confidence 66666665 5568999999999999965 112 2222333311 11236667888998888888888776
Q ss_pred HHHHHHHHhcCCCCCCceeeec
Q 016047 255 IAEHQIWAAVDPYAKNEAFNCN 276 (396)
Q Consensus 255 la~~~i~~~~~~~~~g~~~ni~ 276 (396)
|++++.++.++...+++|||+
T Consensus 216 -a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 216 -AEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp -HHHHHHHHHHSCTTTEEEEES
T ss_pred -HHHHHHHHhCCCCCCCEEEeC
Confidence 888888888766789999985
No 50
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.94 E-value=1.8e-25 Score=210.47 Aligned_cols=266 Identities=16% Similarity=0.154 Sum_probs=179.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTD 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 96 (396)
++|+||||||+||||++|+++|++ +| ++|++++|+.... .....+++++.+|++|++.+.+++.++|.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLE-----NYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----hCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 357999999999999999999998 54 7899999875321 11124688999999999999999999999
Q ss_pred eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047 97 VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 97 V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~ 174 (396)
|+|+|+...... .++.+.+++|+.|+.+++++|++.+ +.+++++||.. + ..|.
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~--~~~iV~~SS~~-----------------~------~~p~ 132 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG--VKRVVALSTDK-----------------A------ANPI 132 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC-----------------C------CCCC
Confidence 999988643321 2566789999999999999999864 56788776311 0 0111
Q ss_pred CCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCcccccee
Q 016047 175 PNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECY 246 (396)
Q Consensus 175 ~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~ 246 (396)
. .|+. |+++..+. ....|++++++||++||| |+. +....+ . .... .+. ++++ +++.+.+.+
T Consensus 133 ~--~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G--~~~--~~i~~~-~--~~~~-~~~~~~~i-~~~~~~r~~ 201 (324)
T TIGR03589 133 N--LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVG--SRG--SVVPFF-K--SLKE-EGVTELPI-TDPRMTRFW 201 (324)
T ss_pred C--HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeC--CCC--CcHHHH-H--HHHH-hCCCCeee-CCCCceEee
Confidence 1 2554 44443321 145789999999999999 432 122211 1 1111 233 3343 345556677
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047 247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG 326 (396)
Q Consensus 247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (396)
+++.|+ +++++.++.. ...+++|+ +++..+++.|+++.+.+.++......
T Consensus 202 i~v~D~---a~a~~~al~~-~~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~------------------------- 251 (324)
T TIGR03589 202 ITLEQG---VNFVLKSLER-MLGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGI------------------------- 251 (324)
T ss_pred EEHHHH---HHHHHHHHhh-CCCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCC-------------------------
Confidence 777776 7777766654 23467884 66677999999999988653321110
Q ss_pred HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHH
Q 016047 327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITW 385 (396)
Q Consensus 327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~ 385 (396)
++.... .....|.+|+++ +||.|++++++++++.
T Consensus 252 -----------~~g~~~--------------~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 252 -----------RPGEKL--------------HEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred -----------CCCchh--------------HhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 000000 023469999986 6999999999998743
No 51
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.94 E-value=1.9e-26 Score=212.69 Aligned_cols=276 Identities=17% Similarity=0.163 Sum_probs=170.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV 103 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~ 103 (396)
||||||||+|+||++|+++|.+ +|++|+++.|. ..|+.|.+.+.+.+.. .|.|+|||+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~-----~~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKE-----RGYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----TSEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhh-----CCCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 5899999999999999999998 89999999775 6899999999888876 4669999876
Q ss_pred ccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047 104 TWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL 181 (396)
Q Consensus 104 ~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~ 181 (396)
+.+... ++...+++|+.++.+|+++|.+.+. +++++||..+|.+. ...|++|++++.|.. .|+.
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~---~li~~STd~VFdG~---------~~~~y~E~d~~~P~~--~YG~ 127 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKERGA---RLIHISTDYVFDGD---------KGGPYTEDDPPNPLN--VYGR 127 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SS---------TSSSB-TTS----SS--HHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC---cEEEeeccEEEcCC---------cccccccCCCCCCCC--HHHH
Confidence 544332 6788999999999999999998753 56666666555332 256789998876654 4887
Q ss_pred HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047 182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW 261 (396)
Q Consensus 182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~ 261 (396)
.|+..|...++..-+..|+|++.+||.. ..++...+...+ ..+.++....+ ++....++.| +|+.++.
T Consensus 128 ~K~~~E~~v~~~~~~~~IlR~~~~~g~~---~~~~~~~~~~~~----~~~~~i~~~~d--~~~~p~~~~d---lA~~i~~ 195 (286)
T PF04321_consen 128 SKLEGEQAVRAACPNALILRTSWVYGPS---GRNFLRWLLRRL----RQGEPIKLFDD--QYRSPTYVDD---LARVILE 195 (286)
T ss_dssp HHHHHHHHHHHH-SSEEEEEE-SEESSS---SSSHHHHHHHHH----HCTSEEEEESS--CEE--EEHHH---HHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEecceecccC---CCchhhhHHHHH----hcCCeeEeeCC--ceeCCEEHHH---HHHHHHH
Confidence 6655554322222389999999999952 223333332111 23444444433 3344444444 4676666
Q ss_pred HhcCC---CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047 262 AAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ 338 (396)
Q Consensus 262 ~~~~~---~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 338 (396)
++... ....++||+++++.+|+.|+++.+++.+|.....+.+ .+..+ .+.
T Consensus 196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~-----------~~~~~---------------~~~- 248 (286)
T PF04321_consen 196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKP-----------VSSSE---------------FPR- 248 (286)
T ss_dssp HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEE-----------ESSTT---------------STT-
T ss_pred HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEe-----------ccccc---------------CCC-
Confidence 65432 2246899999999999999999999999987633211 11100 000
Q ss_pred cccccccccceeehhhhcCc-ccccchhhHhhc-CCCccccCHHHHHHHHHHH
Q 016047 339 PTRLDEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDKV 389 (396)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~~ 389 (396)
. ..++ +..+|++|++.+ |++ ..+.+++|+++++.|
T Consensus 249 --~-------------~~rp~~~~L~~~kl~~~~g~~-~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 249 --A-------------APRPRNTSLDCRKLKNLLGIK-PPPWREGLEELVKQY 285 (286)
T ss_dssp --S-------------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred --C-------------CCCCCcccccHHHHHHccCCC-CcCHHHHHHHHHHHh
Confidence 0 0112 567899999986 998 588999999998765
No 52
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.94 E-value=1.7e-25 Score=194.81 Aligned_cols=236 Identities=15% Similarity=0.140 Sum_probs=169.5
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHh-cCCCeeEEEEecc
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS-QLTDVTHIFYVTW 105 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-~~~~V~h~a~~~~ 105 (396)
|+|||||||||++|+.+|.+ .||+|++++|++..... ....+. .-+.+..... ++|.|+|+|+..-
T Consensus 1 IliTGgTGlIG~~L~~~L~~-----~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRK-----GGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHh-----CCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCcc
Confidence 68999999999999999999 89999999999865321 011111 1122333334 7999999998643
Q ss_pred CCC--c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC--CCcch
Q 016047 106 TNR--S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA--PNFYY 179 (396)
Q Consensus 106 ~~~--~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~--~~~~y 179 (396)
... . .....++..+..|+.|+++..+...+++-+++.|.+.+|+.+ .+..++|+.|.... ....+
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---------~~~~~tE~~~~g~~Fla~lc~ 139 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---------GDRVVTEESPPGDDFLAQLCQ 139 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---------CceeeecCCCCCCChHHHHHH
Confidence 322 2 346678999999999999998776678888887777777543 26778888664321 01123
Q ss_pred hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ 259 (396)
Q Consensus 180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~ 259 (396)
.-|+....+ ...|.+++++|.+.|.|+..|....+...+ ..++|.+ .|++.||.+|+|+.|. ++++
T Consensus 140 ~WE~~a~~a--~~~gtRvvllRtGvVLs~~GGaL~~m~~~f------k~glGG~---~GsGrQ~~SWIhieD~---v~~I 205 (297)
T COG1090 140 DWEEEALQA--QQLGTRVVLLRTGVVLSPDGGALGKMLPLF------KLGLGGK---LGSGRQWFSWIHIEDL---VNAI 205 (297)
T ss_pred HHHHHHhhh--hhcCceEEEEEEEEEecCCCcchhhhcchh------hhccCCc---cCCCCceeeeeeHHHH---HHHH
Confidence 335555543 467899999999999995444333333333 2334544 7899999999999887 7788
Q ss_pred HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047 260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299 (396)
Q Consensus 260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~ 299 (396)
.++..++...| .||++++.+++.++|.+.+++.++.+..
T Consensus 206 ~fll~~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~~ 244 (297)
T COG1090 206 LFLLENEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPAI 244 (297)
T ss_pred HHHHhCcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence 88877765554 5999999999999999999999987654
No 53
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.7e-24 Score=193.16 Aligned_cols=272 Identities=18% Similarity=0.230 Sum_probs=194.8
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEec
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT 104 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~~ 104 (396)
+|||||++|++|+.|++.|.. +++|++++|.. +|++|++.+.+.+... |.|+|+|+.+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~~------~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt 61 (281)
T COG1091 2 KILITGANGQLGTELRRALPG------EFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYT 61 (281)
T ss_pred cEEEEcCCChHHHHHHHHhCC------CceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence 499999999999999999973 57999999862 8999999999999876 6699999877
Q ss_pred cCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHH
Q 016047 105 WTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE 182 (396)
Q Consensus 105 ~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e 182 (396)
..... ++...+.+|..|+.|+.++|++.+..+.|+ ||..+|-+. ...|+.|++++.|.. .|+..
T Consensus 62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhi---STDyVFDG~---------~~~~Y~E~D~~~P~n--vYG~s 127 (281)
T COG1091 62 AVDKAESEPELAFAVNATGAENLARAAAEVGARLVHI---STDYVFDGE---------KGGPYKETDTPNPLN--VYGRS 127 (281)
T ss_pred ccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEe---ecceEecCC---------CCCCCCCCCCCCChh--hhhHH
Confidence 66543 678899999999999999999987555444 444444221 257899999977755 49999
Q ss_pred HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 016047 183 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA 262 (396)
Q Consensus 183 ~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~ 262 (396)
|++.|...+..+-+.+|+|.+++||..+ .||...+... . ..+.++....+ .+.....+.+||+++..+
T Consensus 128 Kl~GE~~v~~~~~~~~I~Rtswv~g~~g---~nFv~tml~l---a-~~~~~l~vv~D-----q~gsPt~~~dlA~~i~~l 195 (281)
T COG1091 128 KLAGEEAVRAAGPRHLILRTSWVYGEYG---NNFVKTMLRL---A-KEGKELKVVDD-----QYGSPTYTEDLADAILEL 195 (281)
T ss_pred HHHHHHHHHHhCCCEEEEEeeeeecCCC---CCHHHHHHHH---h-hcCCceEEECC-----eeeCCccHHHHHHHHHHH
Confidence 9998877667778899999999999544 4554444211 1 12444443332 344455666678887776
Q ss_pred hcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047 263 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL 342 (396)
Q Consensus 263 ~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 342 (396)
+.. ...+++||+++....||.|+++.|.+.++.+..... +.+.. +++ .+.
T Consensus 196 l~~-~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~-----------~~~~~---------------~~~---~~a 245 (281)
T COG1091 196 LEK-EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIE-----------PIASA---------------EYP---TPA 245 (281)
T ss_pred Hhc-cccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccc-----------ccccc---------------ccC---ccC
Confidence 544 344559999998889999999999999997653211 11110 111 111
Q ss_pred cccccceeehhhhcCc-ccccchhhHhhc-CCCccccCHHHHHHHHHH
Q 016047 343 DEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDK 388 (396)
Q Consensus 343 ~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~ 388 (396)
.+ + +-.+|+.|+++. |++ ..+.+++++++++.
T Consensus 246 ~R-------------P~~S~L~~~k~~~~~g~~-~~~w~~~l~~~~~~ 279 (281)
T COG1091 246 KR-------------PANSSLDTKKLEKAFGLS-LPEWREALKALLDE 279 (281)
T ss_pred CC-------------CcccccchHHHHHHhCCC-CccHHHHHHHHHhh
Confidence 11 1 345799999976 776 67788888777654
No 54
>PLN02996 fatty acyl-CoA reductase
Probab=99.94 E-value=5.7e-25 Score=216.78 Aligned_cols=267 Identities=15% Similarity=0.044 Sum_probs=170.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC---------C-----C--------------CCCCe
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------W-----N--------------ADHLV 74 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~---------~-----~--------------~~~~v 74 (396)
.+|+|||||||||||++|+++|++. +.+. +|+++.|..... + . ...++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~---~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVK---KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC---EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 4689999999999999999998863 3322 799999965321 0 0 01578
Q ss_pred eEEEecCCC-------hHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecccee
Q 016047 75 EYVQCDVSD-------PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 147 (396)
Q Consensus 75 ~~~~~Dl~d-------~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~ 147 (396)
+++.||+++ .+.+..+++++|.|+|+|+.... ..++....++|+.||.+++++|++.. ++++++++||..+
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~k~~V~vST~~v 164 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCV-KVKMLLHVSTAYV 164 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEeeeEE
Confidence 999999984 44567788899999999986543 24677789999999999999998752 4778898888887
Q ss_pred eccccccccc-CCCCCC--------Ccc-------------------CC-----------CCC-CCCCCcchhHHHHHHH
Q 016047 148 YLGPFEAFGK-IKPYDP--------PFT-------------------ED-----------MPR-LDAPNFYYTLEDILFE 187 (396)
Q Consensus 148 y~ss~~~~g~-~~~~~~--------p~~-------------------E~-----------~p~-~~~~~~~y~~e~~l~~ 187 (396)
|+......-+ ..+... ..+ |+ .+. ....+..|+..|.+.|
T Consensus 165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE 244 (491)
T PLN02996 165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE 244 (491)
T ss_pred ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence 7642111000 000000 000 00 000 0011123765444444
Q ss_pred Hhhc--CCCeeEEEEcCCceeecCCCCcchhHHHHHH--HHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047 188 EVEK--KEELSWSVHRPDTIFGFSPYSLMNLVGALCV--YAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA 263 (396)
Q Consensus 188 ~~~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~ 263 (396)
.... ..+++++++||++|||+...........+.. .+.+.-+.|....++|++.+.++++++.|+ +.+++.++
T Consensus 245 ~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddv---v~a~l~a~ 321 (491)
T PLN02996 245 MLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMV---VNAMIVAM 321 (491)
T ss_pred HHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHH---HHHHHHHH
Confidence 3321 2479999999999999642211111111000 000111234444678888877777777666 77777666
Q ss_pred cCC--C-CCCceeeecCC--CeeeHHHHHHHHHHHhCCCC
Q 016047 264 VDP--Y-AKNEAFNCNNG--DVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 264 ~~~--~-~~g~~~ni~~~--~~~s~~el~~~l~~~~g~~~ 298 (396)
... . ..+++||++++ .++|+.|+++.+.+.++..+
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 532 1 24689999998 88999999999999887544
No 55
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.92 E-value=1.3e-23 Score=201.99 Aligned_cols=227 Identities=19% Similarity=0.167 Sum_probs=159.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHh
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
...+++|||||||||||++++++|++ +|++|++++|+..... ...++++++.+|++|++++..+++
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~ 131 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVR-----RGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLF 131 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence 34457999999999999999999998 8999999999763210 012478899999999999999888
Q ss_pred ----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047 93 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 168 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~ 168 (396)
++|.|+||++... ......+++|+.++.+++++|++.+ +++|+++|+..+| + |.
T Consensus 132 ~~~~~~D~Vi~~aa~~~---~~~~~~~~vn~~~~~~ll~aa~~~g--v~r~V~iSS~~v~-------~-------p~--- 189 (390)
T PLN02657 132 SEGDPVDVVVSCLASRT---GGVKDSWKIDYQATKNSLDAGREVG--AKHFVLLSAICVQ-------K-------PL--- 189 (390)
T ss_pred HhCCCCcEEEECCccCC---CCCccchhhHHHHHHHHHHHHHHcC--CCEEEEEeecccc-------C-------cc---
Confidence 4888999865321 1223457889999999999999864 6788887753221 1 11
Q ss_pred CCCCCCCCcchh---HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc-
Q 016047 169 MPRLDAPNFYYT---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE- 244 (396)
Q Consensus 169 ~p~~~~~~~~y~---~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~- 244 (396)
..+..+ .|+.+.+ ...+++++|+||+.+||.- ..+ + ... ..+.++.+.|++...+
T Consensus 190 ------~~~~~sK~~~E~~l~~---~~~gl~~tIlRp~~~~~~~----~~~---~----~~~-~~g~~~~~~GdG~~~~~ 248 (390)
T PLN02657 190 ------LEFQRAKLKFEAELQA---LDSDFTYSIVRPTAFFKSL----GGQ---V----EIV-KDGGPYVMFGDGKLCAC 248 (390)
T ss_pred ------hHHHHHHHHHHHHHHh---ccCCCCEEEEccHHHhccc----HHH---H----Hhh-ccCCceEEecCCccccc
Confidence 111112 2333332 2478999999999999821 111 1 111 1255655667665432
Q ss_pred eeeecccHHHHHHHHHHHhcCCCCCCceeeecCC-CeeeHHHHHHHHHHHhCCCCC
Q 016047 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY 299 (396)
Q Consensus 245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~ 299 (396)
..+++.| +|+.++.++.++...+++|||+++ ..+|++|+++++.+.+|.+..
T Consensus 249 ~~I~v~D---lA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 249 KPISEAD---LASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred CceeHHH---HHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 3355544 577777777666667899999986 589999999999999997643
No 56
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.92 E-value=8.2e-23 Score=195.72 Aligned_cols=323 Identities=18% Similarity=0.143 Sum_probs=191.8
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC--------------CC--C-C-CCeeEEEecCCCh--
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------------WN--A-D-HLVEYVQCDVSDP-- 84 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--------------~~--~-~-~~v~~~~~Dl~d~-- 84 (396)
+|||||||||||++|+++|++ +| ++|+|++|..... .. . . .+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~-----~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLR-----RSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHh-----CCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 589999999999999999998 67 5799999975421 00 0 0 4789999999764
Q ss_pred ----HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC
Q 016047 85 ----EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 85 ----~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
+.+..+..++|.|+|+|+.... ..+.....++|+.|+.+++++|.+.+ .++++++||..+|+...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~-------- 144 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAID-------- 144 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcC--------
Confidence 4566777889999999875432 23456677899999999999998764 56688877666553210
Q ss_pred CCCCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047 161 YDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI 232 (396)
Q Consensus 161 ~~~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~ 232 (396)
..+..|+.+..+ .....|+. |+++.++. ..|++++++||+.++|+......+....+...+......+
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~- 220 (367)
T TIGR01746 145 -LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS--DRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG- 220 (367)
T ss_pred -CCCccccccccccccccCCChHHHHHHHHHHHHHHH--hcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-
Confidence 112233332211 11223664 55554433 3489999999999999532222111111111111111122
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCCCC--CceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 016047 233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG 310 (396)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~--g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~ 310 (396)
.+|.......++ .++++++++++.++..+... +++||++++..++++|+++.+.+ +|.+..
T Consensus 221 --~~p~~~~~~~~~---~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~----------- 283 (367)
T TIGR01746 221 --AYPDSPELTEDL---TPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK----------- 283 (367)
T ss_pred --CCCCCCccccCc---ccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC-----------
Confidence 122221112233 44555688888777654432 78999999999999999999998 876643
Q ss_pred CcccCCHHHHhccchHHHHHHHHHh-CCCcccccccccceeehhhhcC---cccccchhhHh----hcCCCccccCHHHH
Q 016047 311 GTQRVKLAEFMKGKEGVWEEIVREN-QLQPTRLDEVGAWWFVDLVLTG---EAKLASMNKSK----EHGFSGFRNSKNSF 382 (396)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~---~~~~~d~~k~~----~lG~~p~~~~~~~~ 382 (396)
.++.++|+...... .... .....++. .-+.+....... ....+++++.+ .+|..+..--.+.+
T Consensus 284 ---~~~~~~w~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (367)
T TIGR01746 284 ---LVSFDEWLQRLEDS----DTAKRDPPRYPLL--PLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLL 354 (367)
T ss_pred ---cCCHHHHHHHHHHh----hhcCCCcccccch--hhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence 25666766542210 0000 00000110 111111000000 02245666553 24766555577889
Q ss_pred HHHHHHHhhCCCC
Q 016047 383 ITWIDKVKGFKIV 395 (396)
Q Consensus 383 ~~~~~~~~~~~~~ 395 (396)
++++++++..|.+
T Consensus 355 ~~~~~~~~~~~~~ 367 (367)
T TIGR01746 355 HLYLQYLKEIGFL 367 (367)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999887754
No 57
>PLN02778 3,5-epimerase/4-reductase
Probab=99.92 E-value=1.5e-22 Score=188.11 Aligned_cols=227 Identities=15% Similarity=0.066 Sum_probs=144.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT 98 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~ 98 (396)
+..+.|+||||||+||||++|+++|++ +|++|+... +|+.|.+.+...+. ++|.|+
T Consensus 5 ~~~~~~kiLVtG~tGfiG~~l~~~L~~-----~g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~Vi 62 (298)
T PLN02778 5 AGSATLKFLIYGKTGWIGGLLGKLCQE-----QGIDFHYGS-----------------GRLENRASLEADIDAVKPTHVF 62 (298)
T ss_pred CCCCCCeEEEECCCCHHHHHHHHHHHh-----CCCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEE
Confidence 445668999999999999999999999 899987432 34455566666666 578899
Q ss_pred EEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC--CCCCccCCCCC
Q 016047 99 HIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP--YDPPFTEDMPR 171 (396)
Q Consensus 99 h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~--~~~p~~E~~p~ 171 (396)
|+|+...... .++.+.+++|+.||.+|+++|++.+ ++++++ ||..+|+ |+...+ ...+++|++++
T Consensus 63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g--v~~v~~-sS~~vy~-----~~~~~p~~~~~~~~Ee~~p 134 (298)
T PLN02778 63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG--LVLTNY-ATGCIFE-----YDDAHPLGSGIGFKEEDTP 134 (298)
T ss_pred ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEE-ecceEeC-----CCCCCCcccCCCCCcCCCC
Confidence 9998654321 2567889999999999999999875 444443 4333442 111001 12357777654
Q ss_pred CCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeeccc
Q 016047 172 LDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASD 251 (396)
Q Consensus 172 ~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~d 251 (396)
.+. ...|+..|.+.+.+...+ -+..++|+..++|.......++... +.+ +.++...+ .++.++.|
T Consensus 135 ~~~-~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~~~~~~fi~~------~~~--~~~~~~~~-----~s~~yv~D 199 (298)
T PLN02778 135 NFT-GSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSDLSNPRNFITK------ITR--YEKVVNIP-----NSMTILDE 199 (298)
T ss_pred CCC-CCchHHHHHHHHHHHHHh-hccEEeeecccCCcccccHHHHHHH------HHc--CCCeeEcC-----CCCEEHHH
Confidence 432 234887666666542222 2567888888788432211122111 111 23322222 13556655
Q ss_pred HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047 252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE 297 (396)
Q Consensus 252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~ 297 (396)
+ +.+++.++.. .. +++||++++..+|++|+++.+++.+|..
T Consensus 200 ~---v~al~~~l~~-~~-~g~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 200 L---LPISIEMAKR-NL-TGIYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred H---HHHHHHHHhC-CC-CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 4 6666655543 22 4699999999999999999999999864
No 58
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=6.9e-24 Score=178.15 Aligned_cols=285 Identities=17% Similarity=0.200 Sum_probs=197.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC--eeEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD--VTHIF 101 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~--V~h~a 101 (396)
++|||||++|.+|+++.+.+.+ +|. +=..+.- .-.+|+++..+.++.++...+ |+|+|
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~-----q~~~~e~wvf~~-------------skd~DLt~~a~t~~lF~~ekPthVIhlA 63 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQE-----QGFDDENWVFIG-------------SKDADLTNLADTRALFESEKPTHVIHLA 63 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHh-----cCCCCcceEEec-------------cccccccchHHHHHHHhccCCceeeehH
Confidence 6999999999999999999998 444 1111111 115899999999999988765 99998
Q ss_pred EeccCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC----CCCCC
Q 016047 102 YVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDA 174 (396)
Q Consensus 102 ~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~----p~~~~ 174 (396)
+..... ...+.+.+..|+.--.|++..|-+.+ ++++++..|++.|. . ....|++|+. |+.|
T Consensus 64 AmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g--v~K~vsclStCIfP-------d--kt~yPIdEtmvh~gpphp- 131 (315)
T KOG1431|consen 64 AMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG--VKKVVSCLSTCIFP-------D--KTSYPIDETMVHNGPPHP- 131 (315)
T ss_pred hhhcchhhcCCCchHHHhhcceechhHHHHHHHhc--hhhhhhhcceeecC-------C--CCCCCCCHHHhccCCCCC-
Confidence 865432 23567889999999999999998876 66666655555442 1 1256788875 3333
Q ss_pred CCcchhHHH-HH---HHHhhcCCCeeEEEEcCCceeecCCC-Cc-chh-HHHHHHHHHHhhhcCC-CceecCCcccccee
Q 016047 175 PNFYYTLED-IL---FEEVEKKEELSWSVHRPDTIFGFSPY-SL-MNL-VGALCVYAAVCKHEGI-PLRFPGTKAAWECY 246 (396)
Q Consensus 175 ~~~~y~~e~-~l---~~~~~~~~~~~~~ilRp~~v~G~~~~-~~-~~~-~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~ 246 (396)
++++|+..| ++ ..++..+.|..++.+-|+++||+..+ ++ ..+ .+.+..-+...+..+. ++...|++...+.+
T Consensus 132 sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF 211 (315)
T KOG1431|consen 132 SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF 211 (315)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence 356677544 22 23444688999999999999994332 11 122 2223221222222343 67788999988888
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCceeeecCCC--eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047 247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324 (396)
Q Consensus 247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~--~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (396)
++..|. |+.+++++.+ ...-+..|++.++ .+|++|+++.+.+..+..+...
T Consensus 212 iys~DL---A~l~i~vlr~-Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~----------------------- 264 (315)
T KOG1431|consen 212 IYSDDL---ADLFIWVLRE-YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV----------------------- 264 (315)
T ss_pred hhHhHH---HHHHHHHHHh-hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE-----------------------
Confidence 887775 8888988754 3334557888777 7999999999999999876532
Q ss_pred hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCcccc-CHHHHHHHHHHHhh
Q 016047 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDKVKG 391 (396)
Q Consensus 325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~~~~~~~~~~~~~ 391 (396)
|+ .++-+ . . .+..+|++|++++||.|+++ +++++.++++||.+
T Consensus 265 ---~D---------ttK~D--G--q--------~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~ 308 (315)
T KOG1431|consen 265 ---WD---------TTKSD--G--Q--------FKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLD 308 (315)
T ss_pred ---ee---------ccCCC--C--C--------cccccchHHHHHhCCCcccChHHHHHHHHHHHHHH
Confidence 11 01000 0 0 03457999999999999998 99999999999975
No 59
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.89 E-value=1.1e-21 Score=194.84 Aligned_cols=259 Identities=12% Similarity=0.063 Sum_probs=165.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCee
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------WN-------------------ADHLVE 75 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~---------~~-------------------~~~~v~ 75 (396)
+++|||||||||||++|+++|++. +.+ .+|+++.|..... +. ...++.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v---~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDV---GKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCC---cEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 589999999999999999999962 222 2799999964321 00 024688
Q ss_pred EEEecCCCh------HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeec
Q 016047 76 YVQCDVSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL 149 (396)
Q Consensus 76 ~~~~Dl~d~------~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ 149 (396)
++.||++++ +..+.+.+.+|.|+|+|+.... ..++....++|+.|+.+++++|++.. ++++++++||..+|+
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~~-~lk~fV~vSTayVyG 273 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKCK-KLKLFLQVSTAYVNG 273 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEEccCceeec
Confidence 999999987 3556666779999999986543 34577889999999999999998753 477899999888886
Q ss_pred cccccccc-CCCCCC-----------------Ccc------------CC--C---------C-------CCCCCCcchhH
Q 016047 150 GPFEAFGK-IKPYDP-----------------PFT------------ED--M---------P-------RLDAPNFYYTL 181 (396)
Q Consensus 150 ss~~~~g~-~~~~~~-----------------p~~------------E~--~---------p-------~~~~~~~~y~~ 181 (396)
...+.+-+ .++... +++ +. . + ..+.++ .|..
T Consensus 274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN-tYt~ 352 (605)
T PLN02503 274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD-TYVF 352 (605)
T ss_pred CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC-hHHH
Confidence 53212111 111000 000 00 0 0 011122 3665
Q ss_pred HHHHHHHhh--cCCCeeEEEEcCCceeec----CCCCcch--hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 016047 182 EDILFEEVE--KKEELSWSVHRPDTIFGF----SPYSLMN--LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD 253 (396)
Q Consensus 182 e~~l~~~~~--~~~~~~~~ilRp~~v~G~----~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~ 253 (396)
.|.+.|... ...+++++|+||+.|.+. -||...+ ...++... -+.|.--.++|+.. ...|+..++
T Consensus 353 TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~----~g~G~lr~~~~~~~---~~~DiVPVD 425 (605)
T PLN02503 353 TKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLY----YGKGQLTGFLADPN---GVLDVVPAD 425 (605)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhh----eeccceeEEEeCCC---eeEeEEeec
Confidence 555554442 234799999999999552 2222222 11222111 11232223566665 556666777
Q ss_pred HHHHHHHHHhc-C---CCCCCceeeecCC--CeeeHHHHHHHHHHHhCC
Q 016047 254 LIAEHQIWAAV-D---PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGI 296 (396)
Q Consensus 254 ~la~~~i~~~~-~---~~~~g~~~ni~~~--~~~s~~el~~~l~~~~g~ 296 (396)
.++.+++.++. . ....+++||++++ ++++|+++.+.+.+.+..
T Consensus 426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 77888877732 1 1234789999988 889999999999987754
No 60
>PRK12320 hypothetical protein; Provisional
Probab=99.88 E-value=8e-21 Score=190.83 Aligned_cols=202 Identities=19% Similarity=0.192 Sum_probs=136.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 105 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~ 105 (396)
|+|||||||||||++|+++|++ +||+|++++|.+... ..++++++.+|+.|+. +.+++.++|.|+|+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~-----~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~- 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIA-----AGHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD- 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC-
Confidence 4799999999999999999999 899999999975432 2247889999999985 778888999999998642
Q ss_pred CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047 106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 185 (396)
Q Consensus 106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l 185 (396)
... ...+|+.|+.|++++|++.+ + +++++|| .+|. .. .+...|.++
T Consensus 72 --~~~---~~~vNv~Gt~nLleAA~~~G--v-RiV~~SS---------~~G~----~~-------------~~~~aE~ll 117 (699)
T PRK12320 72 --TSA---PGGVGITGLAHVANAAARAG--A-RLLFVSQ---------AAGR----PE-------------LYRQAETLV 117 (699)
T ss_pred --ccc---hhhHHHHHHHHHHHHHHHcC--C-eEEEEEC---------CCCC----Cc-------------cccHHHHHH
Confidence 111 23589999999999999875 3 4666653 2221 00 011235444
Q ss_pred HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047 186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 265 (396)
Q Consensus 186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~ 265 (396)
. .++++++++|++++||+ +........+..++. ....+.++ .++|+.|+ +.+++.++..
T Consensus 118 ~-----~~~~p~~ILR~~nVYGp--~~~~~~~r~I~~~l~-~~~~~~pI----------~vIyVdDv---v~alv~al~~ 176 (699)
T PRK12320 118 S-----TGWAPSLVIRIAPPVGR--QLDWMVCRTVATLLR-SKVSARPI----------RVLHLDDL---VRFLVLALNT 176 (699)
T ss_pred H-----hcCCCEEEEeCceecCC--CCcccHhHHHHHHHH-HHHcCCce----------EEEEHHHH---HHHHHHHHhC
Confidence 3 24589999999999994 322211111111111 00112222 23555554 6666666643
Q ss_pred CCCCCceeeecCCCeeeHHHHHHHHHHH
Q 016047 266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQ 293 (396)
Q Consensus 266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~ 293 (396)
+ .+++|||++++.+|++|+++++...
T Consensus 177 ~--~~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 177 D--RNGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred C--CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence 2 2359999999999999998888665
No 61
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.87 E-value=1.6e-20 Score=193.57 Aligned_cols=222 Identities=14% Similarity=0.064 Sum_probs=142.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeEEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF 101 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a 101 (396)
+.|+||||||+||||++|+++|.+ +|++|.. ..+|++|.+.+...+. +.|.|+|||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~-----~g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEK-----QGIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHh-----CCCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence 347899999999999999999998 7888731 1246788888887776 467799999
Q ss_pred EeccCC-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC--CCCCCccCCCCCCCC
Q 016047 102 YVTWTN-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--PYDPPFTEDMPRLDA 174 (396)
Q Consensus 102 ~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--~~~~p~~E~~p~~~~ 174 (396)
+..... . .++.+.+++|+.|+.+|+++|++.+ ++++ +.||..+|+ |+... ....|++|++++.+.
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g--~~~v-~~Ss~~v~~-----~~~~~~~~~~~p~~E~~~~~~~ 508 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG--LLMM-NFATGCIFE-----YDAKHPEGSGIGFKEEDKPNFT 508 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC--CeEE-EEcccceec-----CCcccccccCCCCCcCCCCCCC
Confidence 865321 1 2567889999999999999999875 4443 334433442 11100 013478888765442
Q ss_pred CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047 175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 254 (396)
Q Consensus 175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~ 254 (396)
...|+..|+..+.+...+ -+..++|+..+||..+....++...+. + ...++.++. ...++.++
T Consensus 509 -~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~------~-~~~~~~vp~------~~~~~~~~-- 571 (668)
T PLN02260 509 -GSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKIS------R-YNKVVNIPN------SMTVLDEL-- 571 (668)
T ss_pred -CChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHh------c-cceeeccCC------CceehhhH--
Confidence 234887666666543333 356778888888754433445544331 1 122333332 12233333
Q ss_pred HHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047 255 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 295 (396)
Q Consensus 255 la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g 295 (396)
+.+++.++.. ..+++||++++..+||.|+++.+.+.++
T Consensus 572 -~~~~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 572 -LPISIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred -HHHHHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence 3333433332 3368999999999999999999999874
No 62
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.86 E-value=9.9e-21 Score=175.27 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=148.4
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHH------hc-CCCeeE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL------SQ-LTDVTH 99 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------~~-~~~V~h 99 (396)
+||||||||++|++++++|++ .|++|++++|++.... ..+++.+.+|+.|++++.+++ .+ +|.|+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~-----~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQA-----ASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHh-----CCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 489999999999999999999 8999999999876432 257788899999999999998 56 788888
Q ss_pred EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047 100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179 (396)
Q Consensus 100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y 179 (396)
++.. ... ....+.+++++|++.+ ++||+++|+...+ .+ . + .. .
T Consensus 74 ~~~~---~~~--------~~~~~~~~i~aa~~~g--v~~~V~~Ss~~~~------~~------~---------~-~~--~ 116 (285)
T TIGR03649 74 VAPP---IPD--------LAPPMIKFIDFARSKG--VRRFVLLSASIIE------KG------G---------P-AM--G 116 (285)
T ss_pred eCCC---CCC--------hhHHHHHHHHHHHHcC--CCEEEEeeccccC------CC------C---------c-hH--H
Confidence 7431 111 1235568999999875 8899987642111 00 0 0 00 1
Q ss_pred hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ 259 (396)
Q Consensus 180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~ 259 (396)
..++.+.+ ..+++++++||+.+++..... . .... +. ..+ ++ +.+.+.....++++.| +|+++
T Consensus 117 ~~~~~l~~----~~gi~~tilRp~~f~~~~~~~-~-~~~~------~~-~~~-~~-~~~~g~~~~~~v~~~D---va~~~ 178 (285)
T TIGR03649 117 QVHAHLDS----LGGVEYTVLRPTWFMENFSEE-F-HVEA------IR-KEN-KI-YSATGDGKIPFVSADD---IARVA 178 (285)
T ss_pred HHHHHHHh----ccCCCEEEEeccHHhhhhccc-c-cccc------cc-cCC-eE-EecCCCCccCcccHHH---HHHHH
Confidence 12333222 248999999999888621100 0 0000 11 112 22 2233444445555555 47777
Q ss_pred HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047 260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK 322 (396)
Q Consensus 260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (396)
..++.++...++.||+++++.+|++|+++.+.+.+|.+... ..++.+++.+
T Consensus 179 ~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~------------~~~~~~~~~~ 229 (285)
T TIGR03649 179 YRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITH------------VKLTEEELAQ 229 (285)
T ss_pred HHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEE------------EeCCHHHHHH
Confidence 77666666667889999999999999999999999987654 4566666554
No 63
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.85 E-value=2.4e-21 Score=174.10 Aligned_cols=226 Identities=20% Similarity=0.172 Sum_probs=143.5
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCee----EEEecCCChHHHHHHHh--
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVE----YVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~----~~~~Dl~d~~~~~~~~~-- 92 (396)
||||||+|.||+.|+++|++. +-.+|++++|+.... . ...+++. .+.+|+.|.+.+..+++
T Consensus 1 VLVTGa~GSIGseL~rql~~~----~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY----GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC----B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhc----CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 799999999999999999983 124799999985321 1 1223454 35899999999999999
Q ss_pred cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 93 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+.|.|||.|+.-+++ ..++.+..++|+.||+|++++|.+++ +++|+++||.+..
T Consensus 77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~--v~~~v~ISTDKAv---------------------- 132 (293)
T PF02719_consen 77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG--VERFVFISTDKAV---------------------- 132 (293)
T ss_dssp T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCS----------------------
T ss_pred CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEccccccC----------------------
Confidence 778899998875543 34889999999999999999999975 8999998854321
Q ss_pred CCCCCCcchhH-----HHHHHHHhhcCC---CeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047 171 RLDAPNFYYTL-----EDILFEEVEKKE---ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA 242 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 242 (396)
.|.+. |+. |+++..+. ... +..++++|+|+|.|.. |+.. ..|.. ++. .+.|+.... ..-
T Consensus 133 -~Ptnv--mGatKrlaE~l~~~~~-~~~~~~~t~f~~VRFGNVlgS~-GSVi---p~F~~--Qi~--~g~PlTvT~-p~m 199 (293)
T PF02719_consen 133 -NPTNV--MGATKRLAEKLVQAAN-QYSGNSDTKFSSVRFGNVLGSR-GSVI---PLFKK--QIK--NGGPLTVTD-PDM 199 (293)
T ss_dssp -S--SH--HHHHHHHHHHHHHHHC-CTSSSS--EEEEEEE-EETTGT-TSCH---HHHHH--HHH--TTSSEEECE-TT-
T ss_pred -CCCcH--HHHHHHHHHHHHHHHh-hhCCCCCcEEEEEEecceecCC-CcHH---HHHHH--HHH--cCCcceeCC-CCc
Confidence 12222 664 55555443 323 5899999999999932 2221 22211 122 366766543 345
Q ss_pred cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047 243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~ 298 (396)
.+.+..+.+|..|+ +.++.. ...|++|..--|.++++.|+++.+.+..|..+
T Consensus 200 tRffmti~EAv~Lv---l~a~~~-~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 200 TRFFMTIEEAVQLV---LQAAAL-AKGGEIFVLDMGEPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp EEEEE-HHHHHHHH---HHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-EE
T ss_pred EEEEecHHHHHHHH---HHHHhh-CCCCcEEEecCCCCcCHHHHHHHHHhhccccc
Confidence 57888888884443 333221 34688998888899999999999999998653
No 64
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=1.4e-19 Score=165.37 Aligned_cols=253 Identities=18% Similarity=0.093 Sum_probs=151.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCeeEEEecCCCh----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------W--NADHLVEYVQCDVSDP---- 84 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~~~~v~~~~~Dl~d~---- 84 (396)
++||+||||||+|.+|+++|+... ..+|+|++|..+.. | ....+|+++.||+..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~----~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL 76 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS----DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL 76 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC----CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence 589999999999999999999842 24899999976521 1 1236899999999965
Q ss_pred --HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047 85 --EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 85 --~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
..++++...+|.|+|+++... +..++.+.+..||.||+.+++.|... +.|.+.|+||+.++..-....+ .
T Consensus 77 ~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~-----~ 148 (382)
T COG3320 77 SERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF-----T 148 (382)
T ss_pred CHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC-----c
Confidence 467777788999999987543 23467888999999999999988764 4667777777666543211111 1
Q ss_pred CCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-C
Q 016047 163 PPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-P 233 (396)
Q Consensus 163 ~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~ 233 (396)
...+|+.|... ....+|++ |+++.++. +.|++++|+||+.|.|.+..+.+|....+..++..+..+|. |
T Consensus 149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~--~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P 226 (382)
T COG3320 149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG--DRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP 226 (382)
T ss_pred cccccccccccccCccCCCcchhHHHHHHHHHHHh--hcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC
Confidence 11223333221 11234554 56666554 34899999999999997653333332222222222333332 2
Q ss_pred -ceecCCccccceeeeccc--HHHHHHHHHHHhcCCCCCCceee-ecCCCeeeHHHHHHHHHH
Q 016047 234 -LRFPGTKAAWECYSIASD--ADLIAEHQIWAAVDPYAKNEAFN-CNNGDVFKWKHLWKVLAE 292 (396)
Q Consensus 234 -~~~~g~~~~~~~~~~~~d--a~~la~~~i~~~~~~~~~g~~~n-i~~~~~~s~~el~~~l~~ 292 (396)
..+.-+...-++..+... +..+++++..+..++......|+ ..-+..+...++.+-+.+
T Consensus 227 ~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 227 DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 111111111112222222 23344333333323333333344 233778899998888877
No 65
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.3e-19 Score=170.20 Aligned_cols=229 Identities=17% Similarity=0.146 Sum_probs=166.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhc-
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~- 93 (396)
.+|+||||||+|-||+.+++++++. . --+++.++|+..+. .....++.++-||+.|.+.+..++.+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~-~---p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKF-N---PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhc-C---CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 3689999999999999999999984 1 12799999986432 11236788999999999999999999
Q ss_pred -CCCeeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 94 -LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+|.|||.|+.-+++.. +|.+.+++||.||.|+++||.+.+ +++|+.+|+.+.
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~--V~~~V~iSTDKA----------------------- 379 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG--VKKFVLISTDKA----------------------- 379 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC--CCEEEEEecCcc-----------------------
Confidence 8889999987666543 899999999999999999999875 899998874321
Q ss_pred CCCCCCcchhH-----HHHHHHHhhcCC--CeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047 171 RLDAPNFYYTL-----EDILFEEVEKKE--ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW 243 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 243 (396)
..|.+. |+. |+.+..+..+.. +..++++|.|+|.| .++.. .+++. ..|.+ |.|+++. +..-.
T Consensus 380 V~PtNv--mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG--SrGSV---iPlFk-~QI~~--GgplTvT-dp~mt 448 (588)
T COG1086 380 VNPTNV--MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG--SRGSV---IPLFK-KQIAE--GGPLTVT-DPDMT 448 (588)
T ss_pred cCCchH--hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec--CCCCC---HHHHH-HHHHc--CCCcccc-CCCce
Confidence 123233 554 555554432123 48999999999999 33221 22211 11233 5665543 34445
Q ss_pred ceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047 244 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI 296 (396)
Q Consensus 244 ~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~ 296 (396)
+.+..+.+|..| ++.+. .-...|++|-+--|+++++.|+++.+.+..|.
T Consensus 449 RyfMTI~EAv~L---VlqA~-a~~~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 449 RFFMTIPEAVQL---VLQAG-AIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred eEEEEHHHHHHH---HHHHH-hhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 788999998443 33333 22567899999889999999999999999983
No 66
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.83 E-value=1.5e-18 Score=193.04 Aligned_cols=336 Identities=16% Similarity=0.148 Sum_probs=193.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------------CC--CCCCeeEEEecCCCh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------WN--ADHLVEYVQCDVSDP--- 84 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~--~~~~v~~~~~Dl~d~--- 84 (396)
.++|||||||||+|++|+++|++.... ..++|+|+.|..... +. ...+++++.+|+.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~-~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN-SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC-CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 479999999999999999999973210 137899999974321 00 013688999999754
Q ss_pred ---HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC--
Q 016047 85 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-- 159 (396)
Q Consensus 85 ---~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-- 159 (396)
+.+.++..++|.|+|+|+..... .+.......|+.||.+++++|++. ++++++++||..+|+.. .+....
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~--~~~~~~~~ 1124 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE--YYVNLSDE 1124 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc--cccchhhh
Confidence 55667778899999998865422 234555678999999999999875 36788888887777432 111100
Q ss_pred ---CCCCCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhh
Q 016047 160 ---PYDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK 228 (396)
Q Consensus 160 ---~~~~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~ 228 (396)
.....+.|+.+..+ .....|+. |+++.++ .+.|++++++||+.|||++.....+....+...+....
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~--~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 1202 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA--GKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCI 1202 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH--HhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHH
Confidence 00112334432211 12234775 4444443 23589999999999999643332222222211111111
Q ss_pred hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhh
Q 016047 229 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEE 306 (396)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~ 306 (396)
..+. +| +....+ +..++++++++++.++..+. ..+.+||++++..+++.++++.+.+ +|.+.
T Consensus 1203 ~~~~---~p-~~~~~~---~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~-------- 1266 (1389)
T TIGR03443 1203 QLGL---IP-NINNTV---NMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDV-------- 1266 (1389)
T ss_pred HhCC---cC-CCCCcc---ccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCC--------
Confidence 1221 12 112223 34445566888888776543 2346899999889999999999976 35443
Q ss_pred cCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeeh-hhhcCcccccchhhHhh-c-------CCCcc--
Q 016047 307 EGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVD-LVLTGEAKLASMNKSKE-H-------GFSGF-- 375 (396)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-l-------G~~p~-- 375 (396)
..++..+|....... ....+ ...++.....+ |.+ .........+|.++.++ + |....
T Consensus 1267 ------~~~~~~~w~~~l~~~----~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1334 (1389)
T TIGR03443 1267 ------EIVDYVHWRKSLERF----VIERS-EDNALFPLLHF-VLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSG 1334 (1389)
T ss_pred ------CccCHHHHHHHHHHh----ccccC-ccchhhhHHHH-hhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCC
Confidence 234556665532100 00000 00011000000 000 00011134567777765 3 22222
Q ss_pred -ccCHHHHHHHHHHHhhCCCCC
Q 016047 376 -RNSKNSFITWIDKVKGFKIVP 396 (396)
Q Consensus 376 -~~~~~~~~~~~~~~~~~~~~~ 396 (396)
.-.++-|+.+++++++.|++|
T Consensus 1335 ~~~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443 1335 AGVTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred CCCCHHHHHHHHHHHHHCCCCC
Confidence 235678889999999888875
No 67
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.83 E-value=1.7e-20 Score=170.00 Aligned_cols=166 Identities=25% Similarity=0.239 Sum_probs=93.1
Q ss_pred EEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC------------CC--------CCCCeeEEEecCCCh---
Q 016047 30 IVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN------------WN--------ADHLVEYVQCDVSDP--- 84 (396)
Q Consensus 30 VtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~--------~~~~v~~~~~Dl~d~--- 84 (396)
|||||||+|++|+++|++ .+. +|+|+.|..... .. ...+++++.||++++
T Consensus 1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999998 343 899999976321 00 146999999999986
Q ss_pred ---HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047 85 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 85 ---~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+++..+.+.+|.|+|+|+...... +..+.+++||.||+++++.|.+.. .++++|+||..+.+. ..+.. .
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~-~~~~~~~~NV~gt~~ll~la~~~~--~~~~~~iSTa~v~~~---~~~~~--~ 147 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNA-PYSELRAVNVDGTRNLLRLAAQGK--RKRFHYISTAYVAGS---RPGTI--E 147 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS----TTT----
T ss_pred CChHHhhccccccceeeecchhhhhcc-cchhhhhhHHHHHHHHHHHHHhcc--CcceEEeccccccCC---CCCcc--c
Confidence 456667788999999988644332 556688999999999999999643 337777776221111 11110 0
Q ss_pred CCC--ccCCCC-CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047 162 DPP--FTEDMP-RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS 209 (396)
Q Consensus 162 ~~p--~~E~~p-~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~ 209 (396)
+.. ..+... ........|.+ |+++.++. ++.|++++|+||+.|+|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~-~~~g~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAA-QRHGLPVTIYRPGIIVGDS 202 (249)
T ss_dssp SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHH-HHH---EEEEEE-EEE-SS
T ss_pred ccccccccccchhhccCCccHHHHHHHHHHHHHHHH-hcCCceEEEEecCcccccC
Confidence 111 111111 11112335775 55555544 3458999999999999953
No 68
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3.9e-19 Score=151.60 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=164.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC------CCCCeeEEEecCCChHHHHHHHh
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN------ADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~------~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
|-.||||-||.-|++|++.|++ +||+|+++.|+++.. +. .........+|++|...+.+.+.
T Consensus 29 kvALITGItGQDGSYLaEfLL~-----KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLS-----KGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred eEEEEecccCCCchHHHHHHHh-----CCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 4679999999999999999999 899999999986532 11 11356688999999999999998
Q ss_pred cCCC--eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceee-cccccccccCCCCCCCccC
Q 016047 93 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY-LGPFEAFGKIKPYDPPFTE 167 (396)
Q Consensus 93 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y-~ss~~~~g~~~~~~~p~~E 167 (396)
-+.+ |+|+|+.+++..+ -++..-++...||..||+|.+..+. ...+..| .|+++.||.. .+.|.+|
T Consensus 104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l-------~~~VrfYQAstSElyGkv--~e~PQsE 174 (376)
T KOG1372|consen 104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRL-------TEKVRFYQASTSELYGKV--QEIPQSE 174 (376)
T ss_pred ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCc-------ccceeEEecccHhhcccc--cCCCccc
Confidence 8776 9999998776543 3455567888999999999887531 1222333 4667789975 3778999
Q ss_pred CCCCCCCCCcchhHHHHHHHHh----hcCCCeeEEEEcCCceeec-CCCCcchhH-HHHHHHHH-HhhhcCCCceecCCc
Q 016047 168 DMPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGF-SPYSLMNLV-GALCVYAA-VCKHEGIPLRFPGTK 240 (396)
Q Consensus 168 ~~p~~~~~~~~y~~e~~l~~~~----~~~~~~~~~ilRp~~v~G~-~~~~~~~~~-~~~~~~~~-i~~~~~~~~~~~g~~ 240 (396)
.+|+.|.++ |+..|+..-.+ .+.+++= ..-+.++-. +|+..-++. ..+....+ |..+.. .-...|+.
T Consensus 175 ~TPFyPRSP--Ya~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqq-e~~~LGNL 248 (376)
T KOG1372|consen 175 TTPFYPRSP--YAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQ-EKIELGNL 248 (376)
T ss_pred CCCCCCCCh--hHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcce-eeEEecch
Confidence 999998777 66555432111 0111110 001223332 355555553 33333222 322222 23557888
Q ss_pred cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047 241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI 296 (396)
Q Consensus 241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~ 296 (396)
+..++|.+..|. +++| |.+++.+. .+.|-|+.++..|++|+++......|.
T Consensus 249 ~a~RDWGhA~dY---VEAM-W~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~ 299 (376)
T KOG1372|consen 249 SALRDWGHAGDY---VEAM-WLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGE 299 (376)
T ss_pred hhhcccchhHHH---HHHH-HHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCc
Confidence 877777776665 5554 44444333 345999999999999999998888874
No 69
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.80 E-value=9.6e-18 Score=146.12 Aligned_cols=236 Identities=15% Similarity=0.134 Sum_probs=164.8
Q ss_pred cccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C---CCCCCeeEEEecCCChHHHHH
Q 016047 16 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W---NADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 16 ~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~---~~~~~v~~~~~Dl~d~~~~~~ 89 (396)
...+++...+--+-|+|||||+|.+++.+|.+ .|-+|++--|..+.. . -+...+-+...|+.|++++++
T Consensus 52 GtGGRsS~sGiVaTVFGAtGFlGryvvnklak-----~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~ 126 (391)
T KOG2865|consen 52 GTGGRSSVSGIVATVFGATGFLGRYVVNKLAK-----MGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA 126 (391)
T ss_pred CCCCcccccceEEEEecccccccHHHHHHHhh-----cCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH
Confidence 33444444455678999999999999999999 788999999975432 1 112346688999999999999
Q ss_pred HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047 90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 169 (396)
Q Consensus 90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~ 169 (396)
+++..+.|+++.+.-+.. ......++|+.+.+.|...|++++ +.+++.+|+ .|.. +.
T Consensus 127 vvk~sNVVINLIGrd~eT--knf~f~Dvn~~~aerlAricke~G--VerfIhvS~----------Lgan------v~--- 183 (391)
T KOG2865|consen 127 VVKHSNVVINLIGRDYET--KNFSFEDVNVHIAERLARICKEAG--VERFIHVSC----------LGAN------VK--- 183 (391)
T ss_pred HHHhCcEEEEeecccccc--CCcccccccchHHHHHHHHHHhhC--hhheeehhh----------cccc------cc---
Confidence 999999999998753322 224456899999999999999986 788887662 2211 00
Q ss_pred CCCCC--CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC-cccccee
Q 016047 170 PRLDA--PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT-KAAWECY 246 (396)
Q Consensus 170 p~~~~--~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~-~~~~~~~ 246 (396)
.+. -...+..|+.+.++. -..||+||+.|||...+. .+ .|+.+.+..+ +++..+. ......-
T Consensus 184 --s~Sr~LrsK~~gE~aVrdaf-----PeAtIirPa~iyG~eDrf-ln------~ya~~~rk~~-~~pL~~~GekT~K~P 248 (391)
T KOG2865|consen 184 --SPSRMLRSKAAGEEAVRDAF-----PEATIIRPADIYGTEDRF-LN------YYASFWRKFG-FLPLIGKGEKTVKQP 248 (391)
T ss_pred --ChHHHHHhhhhhHHHHHhhC-----CcceeechhhhcccchhH-HH------HHHHHHHhcC-ceeeecCCcceeecc
Confidence 000 012244466666543 468999999999943221 11 2222334333 3333332 2344456
Q ss_pred eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047 247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE 297 (396)
Q Consensus 247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~ 297 (396)
+++.|+ |++++.++.++.+.|++|..++++.+.+.|+++.+-+..-.-
T Consensus 249 VyV~DV---aa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~ 296 (391)
T KOG2865|consen 249 VYVVDV---AAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREW 296 (391)
T ss_pred EEEehH---HHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhc
Confidence 677776 888999899999999999999999999999999998877653
No 70
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.79 E-value=2.3e-18 Score=156.31 Aligned_cols=225 Identities=15% Similarity=0.141 Sum_probs=141.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCC-hHHHHHHH-hcCCCeeE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD-PEETQAKL-SQLTDVTH 99 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d-~~~~~~~~-~~~~~V~h 99 (396)
+++||||||||+||++|+++|++ +||+|++++|++... .....+++++.+|+.| .+.+.+.+ .++|.|+|
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLA-----KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence 47999999999999999999998 799999999976432 1112468999999998 46777777 68898888
Q ss_pred EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc-c
Q 016047 100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF-Y 178 (396)
Q Consensus 100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~-~ 178 (396)
+++.... .++...+++|..++.++++++++.+ +++++++||..+|+.. . ..+..+... ....+ .
T Consensus 92 ~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~--~~~iV~iSS~~v~g~~-------~--~~~~~~~~~--~~~~~~~ 156 (251)
T PLN00141 92 ATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAG--VTRFILVSSILVNGAA-------M--GQILNPAYI--FLNLFGL 156 (251)
T ss_pred CCCCCcC--CCCCCceeeehHHHHHHHHHHHHcC--CCEEEEEccccccCCC-------c--ccccCcchh--HHHHHHH
Confidence 7653211 1223345789999999999998754 6788988866555321 0 111111100 00010 0
Q ss_pred hhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047 179 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 258 (396)
Q Consensus 179 y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~ 258 (396)
+...+...+.+.++.+++++++||+.+++..... . ....++.. .+...+ +..++|+.
T Consensus 157 ~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~--~-----------------~~~~~~~~-~~~~~i---~~~dvA~~ 213 (251)
T PLN00141 157 TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG--N-----------------IVMEPEDT-LYEGSI---SRDQVAEV 213 (251)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCc--e-----------------EEECCCCc-cccCcc---cHHHHHHH
Confidence 1123333332225678999999999999832110 0 00011110 001122 44556888
Q ss_pred HHHHhcCCCCCCceeeecCC--C-eeeHHHHHHHHHH
Q 016047 259 QIWAAVDPYAKNEAFNCNNG--D-VFKWKHLWKVLAE 292 (396)
Q Consensus 259 ~i~~~~~~~~~g~~~ni~~~--~-~~s~~el~~~l~~ 292 (396)
++.++..+...+.++.+.+. . ..++++++..+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 214 AVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 88887776666777888862 2 3789988887764
No 71
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.77 E-value=1.4e-18 Score=149.95 Aligned_cols=150 Identities=24% Similarity=0.333 Sum_probs=108.4
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEeccCC
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN 107 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~~~ 107 (396)
|+|+||||++|++|+++|++ +|++|++++|++.+... ..+++++.+|+.|++++.+++.++|.|+|+++. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~-----~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~---~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLR-----RGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP---P 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS---T
T ss_pred eEEECCCChHHHHHHHHHHH-----CCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhhh---h
Confidence 79999999999999999999 78999999999764321 479999999999999999999999999998642 1
Q ss_pred CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHHHH
Q 016047 108 RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFE 187 (396)
Q Consensus 108 ~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~ 187 (396)
.. ....+++++++|++.+ +++++++|+...|... ........+ +....++...+...+
T Consensus 72 ~~--------~~~~~~~~~~a~~~~~--~~~~v~~s~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~e~ 129 (183)
T PF13460_consen 72 PK--------DVDAAKNIIEAAKKAG--VKRVVYLSSAGVYRDP----------PGLFSDEDK--PIFPEYARDKREAEE 129 (183)
T ss_dssp TT--------HHHHHHHHHHHHHHTT--SSEEEEEEETTGTTTC----------TSEEEGGTC--GGGHHHHHHHHHHHH
T ss_pred cc--------cccccccccccccccc--cccceeeeccccCCCC----------Ccccccccc--cchhhhHHHHHHHHH
Confidence 11 2788889999999875 7788888865544321 111111111 111122332333334
Q ss_pred HhhcCCCeeEEEEcCCceeecC
Q 016047 188 EVEKKEELSWSVHRPDTIFGFS 209 (396)
Q Consensus 188 ~~~~~~~~~~~ilRp~~v~G~~ 209 (396)
.+ ++.+++|+++||+.+||..
T Consensus 130 ~~-~~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 130 AL-RESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HH-HHSTSEEEEEEESEEEBTT
T ss_pred HH-HhcCCCEEEEECcEeEeCC
Confidence 43 4568999999999999953
No 72
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.76 E-value=1.3e-17 Score=163.13 Aligned_cols=227 Identities=15% Similarity=0.100 Sum_probs=143.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC----------CCCCeeEEEecCCChHH
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN----------ADHLVEYVQCDVSDPEE 86 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~----------~~~~v~~~~~Dl~d~~~ 86 (396)
.++++||||||+|+||++++++|++ .|++|++++|+.... .. ...+++++.+|+.|.++
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk-----~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLK-----LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3568999999999999999999999 899999999975421 00 01357899999999999
Q ss_pred HHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047 87 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 166 (396)
Q Consensus 87 ~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~ 166 (396)
+.+++.++|.|+|+++.......+....+++|+.|+.+++++|++.+ +.+|+++||...+ ..+ .+
T Consensus 153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag--VgRIV~VSSiga~-----~~g------~p-- 217 (576)
T PLN03209 153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK--VNHFILVTSLGTN-----KVG------FP-- 217 (576)
T ss_pred HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhc-----ccC------cc--
Confidence 99999999999999774322112345567899999999999998764 6788888754321 011 00
Q ss_pred CCCCCCCCCCcch-hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047 167 EDMPRLDAPNFYY-TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC 245 (396)
Q Consensus 167 E~~p~~~~~~~~y-~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~ 245 (396)
+. ... ....| ...+.+++.+ ...|++|++|||+.+.++ .........+ . ...++ .....
T Consensus 218 ~~-~~~--sk~~~~~~KraaE~~L-~~sGIrvTIVRPG~L~tp--~d~~~~t~~v------~-------~~~~d-~~~gr 277 (576)
T PLN03209 218 AA-ILN--LFWGVLCWKRKAEEAL-IASGLPYTIVRPGGMERP--TDAYKETHNL------T-------LSEED-TLFGG 277 (576)
T ss_pred cc-chh--hHHHHHHHHHHHHHHH-HHcCCCEEEEECCeecCC--ccccccccce------e-------ecccc-ccCCC
Confidence 00 000 11112 2233344444 567899999999999873 2111000000 0 00000 00001
Q ss_pred eeecccHHHHHHHHHHHhcCCC-CCCceeeecCCCeeeHHHHHHHHHH
Q 016047 246 YSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNGDVFKWKHLWKVLAE 292 (396)
Q Consensus 246 ~~~~~da~~la~~~i~~~~~~~-~~g~~~ni~~~~~~s~~el~~~l~~ 292 (396)
. ..-.++|+.+++++.++. ..+.+|.+.++.......+.+.+.+
T Consensus 278 ~---isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ 322 (576)
T PLN03209 278 Q---VSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK 322 (576)
T ss_pred c---cCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence 1 223446888888887554 5689999998764433444444433
No 73
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.5e-17 Score=148.97 Aligned_cols=229 Identities=13% Similarity=0.071 Sum_probs=142.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
|.|+||||||+|+||++++++|++ +|++|++++|++... . ....++.++++|++|.+++.+++.
T Consensus 1 m~k~vlVtGasg~IG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 1 MSKTWFITGASSGFGRGMTERLLA-----RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999 899999999975321 0 012468899999999988877664
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
.+|.|+|+++...... ......+++|+.++.++++++.+. .....+++++||...+ . ..
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~-----~~- 142 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ-------I-----AY- 142 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc-------c-----CC-
Confidence 3688999987543221 134567889999999999997432 1124677777642110 0 00
Q ss_pred ccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCce---eecCCCCc--ch-h-HHHHHHHHHHhhhc
Q 016047 165 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTI---FGFSPYSL--MN-L-VGALCVYAAVCKHE 230 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v---~G~~~~~~--~~-~-~~~~~~~~~i~~~~ 230 (396)
| + ...|+. +.++..+.. ..++++++++||+.+ ||.+.... .. . ......+ .+..
T Consensus 143 -----~--~--~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 210 (276)
T PRK06482 143 -----P--G--FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL---RRAL 210 (276)
T ss_pred -----C--C--CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH---HHHH
Confidence 0 1 112554 333333221 246899999999987 65321110 00 0 0001001 1111
Q ss_pred -CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047 231 -GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 295 (396)
Q Consensus 231 -~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g 295 (396)
..++. . ..|.++++.+++.++..+ ..+..||++++...++.|+++.+.+.++
T Consensus 211 ~~~~~~---------~---~~d~~~~~~a~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 211 ADGSFA---------I---PGDPQKMVQAMIASADQT-PAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred hhccCC---------C---CCCHHHHHHHHHHHHcCC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 10101 0 134556688888877543 3356799999988899888888877664
No 74
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.72 E-value=1.1e-17 Score=150.12 Aligned_cols=224 Identities=16% Similarity=0.197 Sum_probs=140.1
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT 104 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~ 104 (396)
|+||||||.+|+++++.|++ .+++|++++|++.+.. ....+++++.+|+.|++++.++++++|.|+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~-----~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~- 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-----AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP- 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-----TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC-
T ss_pred CEEECCccHHHHHHHHHHHh-----CCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc-
Confidence 79999999999999999999 7999999999874321 12257889999999999999999999998877321
Q ss_pred cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047 105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI 184 (396)
Q Consensus 105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~ 184 (396)
.. ...+....++++||++++ ++||++.+ ++.. . .+.....|. ...+.....
T Consensus 75 --~~-------~~~~~~~~~li~Aa~~ag--Vk~~v~ss-----------~~~~----~--~~~~~~~p~-~~~~~~k~~ 125 (233)
T PF05368_consen 75 --SH-------PSELEQQKNLIDAAKAAG--VKHFVPSS-----------FGAD----Y--DESSGSEPE-IPHFDQKAE 125 (233)
T ss_dssp --SC-------CCHHHHHHHHHHHHHHHT---SEEEESE-----------ESSG----T--TTTTTSTTH-HHHHHHHHH
T ss_pred --ch-------hhhhhhhhhHHHhhhccc--cceEEEEE-----------eccc----c--ccccccccc-chhhhhhhh
Confidence 11 223455678999999986 99998654 1110 0 111111111 111333444
Q ss_pred HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047 185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 264 (396)
Q Consensus 185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~ 264 (396)
+++++ ++.+++++++||+..+... ...+.... ..+.....+.+++++.....+. .+..++++....++.
T Consensus 126 ie~~l-~~~~i~~t~i~~g~f~e~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~Dvg~~va~il~ 194 (233)
T PF05368_consen 126 IEEYL-RESGIPYTIIRPGFFMENL-------LPPFAPVV-DIKKSKDVVTLPGPGNQKAVPV--TDTRDVGRAVAAILL 194 (233)
T ss_dssp HHHHH-HHCTSEBEEEEE-EEHHHH-------HTTTHHTT-CSCCTSSEEEEETTSTSEEEEE--EHHHHHHHHHHHHHH
T ss_pred hhhhh-hhccccceeccccchhhhh-------hhhhcccc-cccccceEEEEccCCCcccccc--ccHHHHHHHHHHHHc
Confidence 45554 5559999999988766621 11010000 0000011234555554323332 344455666666666
Q ss_pred CCCCC--CceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047 265 DPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 265 ~~~~~--g~~~ni~~~~~~s~~el~~~l~~~~g~~~ 298 (396)
++... ++.+++++ +.+|+.|+++.+.+.+|.+.
T Consensus 195 ~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 195 DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence 65544 67777765 88999999999999999874
No 75
>PRK09135 pteridine reductase; Provisional
Probab=99.69 E-value=1.1e-15 Score=138.43 Aligned_cols=214 Identities=16% Similarity=0.137 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHhc-
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~~- 93 (396)
+.++||||||+|+||++++++|++ +|++|++++|+.... . .....+.++.+|++|.+++..+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHA-----AGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAAC 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 457999999999999999999998 899999999864221 0 0113578899999999988877764
Q ss_pred ------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCC
Q 016047 94 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 94 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
+|.|+|+++...... .+....+++|+.|+.++++++.+.- ..-..++.++ + .
T Consensus 80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~-------~--~------ 144 (249)
T PRK09135 80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNIT-------D--I------ 144 (249)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEe-------C--h------
Confidence 588999987532211 1346678999999999999987541 1112222221 1 1
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 234 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 234 (396)
.++.|..+... |+. |.++..+..+ ..+++++++||+.++|+.....++ ...... ... ..++
T Consensus 145 -----~~~~~~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~---~~~~~~-~~~--~~~~ 211 (249)
T PRK09135 145 -----HAERPLKGYPV--YCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD---EEARQA-ILA--RTPL 211 (249)
T ss_pred -----hhcCCCCCchh--HHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC---HHHHHH-HHh--cCCc
Confidence 11222222222 553 4444444311 236999999999999954222111 111100 011 1111
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCC-CCCCceeeecCCCeee
Q 016047 235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFK 282 (396)
Q Consensus 235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~-~~~g~~~ni~~~~~~s 282 (396)
...+ +.+++|+++.+++.+. ...|++||++++..++
T Consensus 212 ~~~~------------~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 212 KRIG------------TPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred CCCc------------CHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 1111 2355577775655432 3468999999887654
No 76
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.67 E-value=1.2e-15 Score=145.03 Aligned_cols=255 Identities=20% Similarity=0.222 Sum_probs=157.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC--------C--------------CCCCCeeEEEec
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN--------W--------------NADHLVEYVQCD 80 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~--------~--------------~~~~~v~~~~~D 80 (396)
.+|+|+|||||||+|.-|++.|+.. +.+. +|+.+.|..... + ....++..+.||
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~---~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVK---RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcc---eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 4689999999999999999999974 3332 799999975422 0 012467789999
Q ss_pred CCCh------HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccc
Q 016047 81 VSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA 154 (396)
Q Consensus 81 l~d~------~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~ 154 (396)
+.++ .+++...+.++.|+|+|+..... +..+....+|..||+++++.|++. ++++-++++|+..+.. .
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~----~ 161 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNC----N 161 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheec----c
Confidence 9876 35666778889999999864332 344566789999999999999986 4688888887644331 1
Q ss_pred cccCCCCCCCcc------------CCC---------CCC--CCCCc-chh---HHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 155 FGKIKPYDPPFT------------EDM---------PRL--DAPNF-YYT---LEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 155 ~g~~~~~~~p~~------------E~~---------p~~--~~~~~-~y~---~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
-+...+..-|.. |+. |.. ..++. .|. .|.++.+ ...++|.+|+||+.|..
T Consensus 162 ~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~---~~~~lPivIiRPsiI~s 238 (467)
T KOG1221|consen 162 VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQK---EAENLPLVIIRPSIITS 238 (467)
T ss_pred cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHh---hccCCCeEEEcCCceec
Confidence 111110000111 110 000 01222 222 2555554 35679999999999988
Q ss_pred cC----CCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc--CCC---CCCceeeecCC
Q 016047 208 FS----PYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV--DPY---AKNEAFNCNNG 278 (396)
Q Consensus 208 ~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~--~~~---~~g~~~ni~~~ 278 (396)
.. ||+..+.-.+..+.+ .-+.|.--.+.++.+ +..|+..+|.++.+++.++- ... ....+||++++
T Consensus 239 t~~EP~pGWidn~~gp~g~i~--g~gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss 313 (467)
T KOG1221|consen 239 TYKEPFPGWIDNLNGPDGVII--GYGKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSS 313 (467)
T ss_pred cccCCCCCccccCCCCceEEE--EeccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEeccc
Confidence 53 232222211110000 001121112334333 66778888888888886652 111 12469999986
Q ss_pred C--eeeHHHHHHHHHHHhC
Q 016047 279 D--VFKWKHLWKVLAEQFG 295 (396)
Q Consensus 279 ~--~~s~~el~~~l~~~~g 295 (396)
. +++|+++.+...+.+-
T Consensus 314 ~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 314 NDNPVTWGDFIELALRYFE 332 (467)
T ss_pred ccCcccHHHHHHHHHHhcc
Confidence 4 5999999999988875
No 77
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.6e-15 Score=139.70 Aligned_cols=237 Identities=14% Similarity=-0.033 Sum_probs=140.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
|+++||||||+|+||++++++|++ +|++|++++|++... ......+.++++|++|++++.+++.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALE-----RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999998 899999999975321 0012357789999999988776655
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
.+|.|+|+++...... ++....+++|+.++.++++++.+. ..+..+++++||...+ .. .+
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~-------~~-----~~ 144 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI-------SA-----FP 144 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc-------CC-----CC
Confidence 3577999987543211 145677899999998888776322 1124567776643222 11 00
Q ss_pred ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047 165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP 237 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 237 (396)
. ...|+..|. ...+. ....|++++++||+.+.....+...........+..+......
T Consensus 145 --------~--~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----- 209 (275)
T PRK08263 145 --------M--SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE----- 209 (275)
T ss_pred --------C--ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH-----
Confidence 0 112553222 22221 1346899999999988763221110000000000000000000
Q ss_pred CCccccceeeec-ccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047 238 GTKAAWECYSIA-SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE 297 (396)
Q Consensus 238 g~~~~~~~~~~~-~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~ 297 (396)
.. ....+ .+..++++.++.++..+...++.|+...+..+++.++.+.+.++.+.+
T Consensus 210 --~~---~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (275)
T PRK08263 210 --QW---SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEEWE 265 (275)
T ss_pred --HH---HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHHHH
Confidence 00 00112 445666888888777655555655444446789999999998875443
No 78
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.5e-15 Score=136.07 Aligned_cols=217 Identities=22% Similarity=0.176 Sum_probs=132.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+++++|||||+|+||.+++++|++ +|++|++++|+.... +. ...++.++.+|++|++++..+++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAG-----AGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAR 79 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999875321 00 12357789999999998877665
Q ss_pred ----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047 93 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED 168 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~ 168 (396)
.+|.|+|+|+.......++...+++|+.++.++++++.+...+-.+++++||... .+. +..+.
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~------~~~-------~~~~~ 146 (248)
T PRK07806 80 EEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA------HFI-------PTVKT 146 (248)
T ss_pred HhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh------hcC-------ccccC
Confidence 4677888876432222245567889999999999999875222246666654211 110 00111
Q ss_pred CCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCc-
Q 016047 169 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK- 240 (396)
Q Consensus 169 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~- 240 (396)
.|. ...|+. |.++..+.. ...++++++++|+.+-++. ...+ ... .. ++..
T Consensus 147 ~~~----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-------~~~~------~~~-~~----~~~~~ 204 (248)
T PRK07806 147 MPE----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV-------TATL------LNR-LN----PGAIE 204 (248)
T ss_pred Ccc----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch-------hhhh------hcc-CC----HHHHH
Confidence 111 112553 444433321 3467999999988776621 0111 000 00 0000
Q ss_pred cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCe
Q 016047 241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV 280 (396)
Q Consensus 241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~ 280 (396)
..........++.++|+++++++......|++|++++++.
T Consensus 205 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 205 ARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred HHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence 0001112344556668888888876666799999998764
No 79
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.64 E-value=1.1e-14 Score=131.92 Aligned_cols=160 Identities=14% Similarity=-0.006 Sum_probs=108.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.++++||||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+.|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAA-----DGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGV 78 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999 899999999974321 0 012358899999999998887775
Q ss_pred ----cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047 93 ----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+|.|+|+++..... . .+....+.+|+.++.++++++... ..+..+++++|+...+ +
T Consensus 79 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~-------~---- 147 (251)
T PRK12826 79 EDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP-------R---- 147 (251)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh-------c----
Confidence 467799998653321 1 134667899999999999988532 1225567766643221 0
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.+ ... ...|+. +.++..+. ....+++++++||+.++|+
T Consensus 148 --~~------~~~--~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 192 (251)
T PRK12826 148 --VG------YPG--LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTP 192 (251)
T ss_pred --cC------CCC--ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcc
Confidence 00 001 112443 33333322 1345899999999999994
No 80
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.62 E-value=1.1e-14 Score=132.92 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=104.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
++++|||||+|+||++++++|++ .|++|++++|++... .. ...++.++++|++|.+.+.+++..
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELAR-----AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999976321 00 123577899999999988776654
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHH-cccCCCcceEEEeccceeecccccccccCC
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAV-IPNAPNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~-~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
+|.|+|+++...... +.....+++|+.+ ++++++++ ++. ...+++++||...+ ++
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~------~~--- 150 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSH------EA--- 150 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhc------CC---
Confidence 688999987543211 1345667899999 77777777 433 35677777642111 11
Q ss_pred CCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
.+. ...........+.+++.+.. ...+++++++||+.++++
T Consensus 151 ---~~~-----~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~ 193 (262)
T PRK13394 151 ---SPL-----KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP 193 (262)
T ss_pred ---CCC-----CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccch
Confidence 000 00100111112333322221 346899999999999994
No 81
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=1.1e-14 Score=131.56 Aligned_cols=211 Identities=18% Similarity=0.113 Sum_probs=129.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+.++||||||||+||++|+++|++ +|++|+++.|+.... . ....+++++.+|+.|++++.++++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLAR-----AGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAV 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHH
Confidence 347999999999999999999999 899998888765321 0 112468899999999998877765
Q ss_pred ----cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047 93 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+|.|+|+++...... . .....+++|+.++.++++++.+. .....+++++||...+ ++
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~------~~---- 149 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL------PG---- 149 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC------CC----
Confidence 3578999987432211 1 34567899999999999887432 1125677777643222 11
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP 233 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~ 233 (396)
.+ . ...|+. +.++..+. ....+++++++||+.++|+..... ..... . ......
T Consensus 150 --~~--------~--~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~-~----~~~~~~- 209 (249)
T PRK12825 150 --WP--------G--RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEAR-E----AKDAET- 209 (249)
T ss_pred --CC--------C--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhH-H----hhhccC-
Confidence 00 1 111443 33333222 134689999999999999431111 11101 0 000001
Q ss_pred ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047 234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV 280 (396)
Q Consensus 234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~ 280 (396)
+. + .+ ...+++++.+.+++.+. ...|++|+++++..
T Consensus 210 -~~-~------~~---~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~ 247 (249)
T PRK12825 210 -PL-G------RS---GTPEDIARAVAFLCSDASDYITGQVIEVTGGVD 247 (249)
T ss_pred -CC-C------CC---cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence 11 1 12 23344577777776543 34589999998754
No 82
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.61 E-value=4.1e-14 Score=130.33 Aligned_cols=229 Identities=14% Similarity=0.102 Sum_probs=139.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+++||||||+|+||++++++|++ +|++|++++|++... .. ...++.++.+|+.|++++.++++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVA-----AGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999875321 00 01367889999999998877666
Q ss_pred ----cCCCeeEEEEeccC---C--Cc--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCC
Q 016047 93 ----QLTDVTHIFYVTWT---N--RS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~---~--~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.|+|+++.... . .+ .....+++|+.++.++++++.+.. .+-.+++++||...+ .
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~-------~--- 151 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS-------N--- 151 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-------C---
Confidence 56889999874311 1 11 345678899999999998776541 112356666542211 1
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI 232 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~ 232 (396)
.. + + ...|+. +.++..+.. ...+++++++||+.+.++....... ...... ... ...
T Consensus 152 --~~------~--~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~--~~~--~~~ 214 (276)
T PRK05875 152 --TH------R--W--FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSA--DYR--ACT 214 (276)
T ss_pred --CC------C--C--CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHH--HHH--cCC
Confidence 00 0 1 112543 333333221 2457999999999887632111000 000000 000 011
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCceeeecCCCee----eHHHHHHHHHHHhCCC
Q 016047 233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVF----KWKHLWKVLAEQFGIE 297 (396)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~--~g~~~ni~~~~~~----s~~el~~~l~~~~g~~ 297 (396)
++. .+ .+..++|.++++++..+.. .|++||+.++..+ +..|+++.+....|..
T Consensus 215 ~~~---------~~---~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 215 PLP---------RV---GEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred CCC---------CC---cCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 111 12 2244557777777765443 3899999988776 7777777777655543
No 83
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.2e-13 Score=126.89 Aligned_cols=224 Identities=16% Similarity=0.105 Sum_probs=145.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 105 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~ 105 (396)
++|||||||||+|++++++|++ .||+|++++|++........++++..+|+.++..+..++.+.+.++++.....
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~-----~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~ 75 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLA-----RGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD 75 (275)
T ss_pred CeEEEEecccchHHHHHHHHHh-----CCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc
Confidence 4799999999999999999999 89999999999764311116899999999999999999999998888855322
Q ss_pred CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047 106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL 185 (396)
Q Consensus 106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l 185 (396)
.+. ...........+..+++. ..+.++++.| +.+.. . .+...|...+..
T Consensus 76 ---~~~-~~~~~~~~~~~~~a~~a~---~~~~~~~~~s----------~~~~~-----~---------~~~~~~~~~~~~ 124 (275)
T COG0702 76 ---GSD-AFRAVQVTAVVRAAEAAG---AGVKHGVSLS----------VLGAD-----A---------ASPSALARAKAA 124 (275)
T ss_pred ---ccc-chhHHHHHHHHHHHHHhc---CCceEEEEec----------cCCCC-----C---------CCccHHHHHHHH
Confidence 111 233444455545555444 2366676554 33310 0 111225544444
Q ss_pred HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047 186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 265 (396)
Q Consensus 186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~ 265 (396)
.+......|++++++|+..+|... .... ... ....+.++...+.+ ....+. .++++..+..+...
T Consensus 125 ~e~~l~~sg~~~t~lr~~~~~~~~-~~~~---~~~------~~~~~~~~~~~~~~--~~~~i~---~~d~a~~~~~~l~~ 189 (275)
T COG0702 125 VEAALRSSGIPYTTLRRAAFYLGA-GAAF---IEA------AEAAGLPVIPRGIG--RLSPIA---VDDVAEALAAALDA 189 (275)
T ss_pred HHHHHHhcCCCeEEEecCeeeecc-chhH---HHH------HHhhCCceecCCCC--ceeeeE---HHHHHHHHHHHhcC
Confidence 443336678999999977766611 1110 000 11223332222222 123333 34446665555666
Q ss_pred CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCC
Q 016047 266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG 300 (396)
Q Consensus 266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~ 300 (396)
+...+++|.+++++..+..++...+.+..|.+...
T Consensus 190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 190 PATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred CcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 66778999999998999999999999999988765
No 84
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.8e-14 Score=131.25 Aligned_cols=230 Identities=13% Similarity=0.065 Sum_probs=138.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ----- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~----- 93 (396)
|.+++|||||+|+||.+++++|++ +|++|++++|++... .....+++++.+|+.|.+++..++..
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLA-----AGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER 75 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467999999999999999999998 899999999975421 01123678999999999988776654
Q ss_pred --CCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047 94 --LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
+|.|+|+++...... . .....+.+|+.++.++++++... ..+..+++++||...+. .+|
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~------- 144 (257)
T PRK07074 76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----ALG------- 144 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----CCC-------
Confidence 688999987532211 1 12344679999999998887432 11235677666421110 111
Q ss_pred CccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047 164 PFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA 241 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~ 241 (396)
.+ .........+.++..+.. ...++++..+||+.++++.-.........+.. ... ...+
T Consensus 145 -----~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~--~~~~-------- 205 (257)
T PRK07074 145 -----HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFE--ELK--KWYP-------- 205 (257)
T ss_pred -----Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHH--HHH--hcCC--------
Confidence 01 101111222333333221 34579999999999988421111000011100 000 0101
Q ss_pred ccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHHHHHHHHH
Q 016047 242 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAE 292 (396)
Q Consensus 242 ~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~el~~~l~~ 292 (396)
...+.+ +++++.++++++... ...|+++++.++...+.+||.+.+.+
T Consensus 206 -~~~~~~---~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 206 -LQDFAT---PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred -CCCCCC---HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 112333 444577878777542 33478899988888999999988754
No 85
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.59 E-value=8.6e-15 Score=133.04 Aligned_cols=156 Identities=14% Similarity=0.093 Sum_probs=101.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
++||||||+|+||++|+++|++ +|++|++++|++... . ....++.++.+|+.|++++.++++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAA-----AGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999998 899999999975321 0 012367889999999986655443
Q ss_pred -cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047 93 -QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 93 -~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.+|.|+|+++...... + +....+.+|+.|+.++++++... .....+++++|+...+ .+ .
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~------~~------~ 144 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL------VA------S 144 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc------CC------C
Confidence 4577999887533211 1 23556789999988888877432 1235677777643211 11 0
Q ss_pred CccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 164 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
+. ... |.. +.+...+. ....+++++++||+.++++
T Consensus 145 ~~--------~~~--y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~ 186 (255)
T TIGR01963 145 PF--------KSA--YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP 186 (255)
T ss_pred CC--------Cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 10 011 332 22232221 0235899999999999993
No 86
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.59 E-value=1.3e-14 Score=132.17 Aligned_cols=156 Identities=15% Similarity=0.048 Sum_probs=102.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++||||||+|+||++++++|++ +|++|++++|++... . ....+++++.+|++|++++.+++.
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAK-----EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999 899999999976431 0 012467889999999998877666
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.|+|+++...... ......+++|+.++.++++++... ..+..+++++||...+ ++.
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~------~~~----- 147 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL------VGS----- 147 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc------cCC-----
Confidence 4677999877433211 123456789999955555544332 1236778877653222 110
Q ss_pred CCccCCCCCCCCCCcchhH-----H---HHHHHHhhcCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
+ ..+. |+. + +.+.... ...++.+.++||+.+.++
T Consensus 148 -~--------~~~~--y~~~k~a~~~~~~~l~~~~-~~~~i~v~~~~pg~v~~~ 189 (258)
T PRK12429 148 -A--------GKAA--YVSAKHGLIGLTKVVALEG-ATHGVTVNAICPGYVDTP 189 (258)
T ss_pred -C--------Ccch--hHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCcch
Confidence 0 0011 332 2 2222222 456899999999999984
No 87
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.59 E-value=9.1e-14 Score=126.46 Aligned_cols=158 Identities=17% Similarity=0.100 Sum_probs=105.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
|+|+||||||+|+||++++++|++ +|++|++++|+.... . ....++.++++|++|++++.++++
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAA-----AGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ 75 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 568999999999999999999999 899999999865321 0 012468899999999988766554
Q ss_pred ----cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc---CC-----CcceEEEeccceeecccc
Q 016047 93 ----QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN---AP-----NLRHVCLQTGTKHYLGPF 152 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~---~~-----~~~~~~~~s~~~~y~ss~ 152 (396)
.+|.|+|+++...... ......+++|+.++.++++++.+. .. ...+++++||...+
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---- 151 (256)
T PRK12745 76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI---- 151 (256)
T ss_pred HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc----
Confidence 4577999987532211 134567899999999998887543 11 14567766643211
Q ss_pred cccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
++. . +... |+. +.++..+.. ...+++++++||+.+.++
T Consensus 152 --~~~--------~------~~~~--Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 196 (256)
T PRK12745 152 --MVS--------P------NRGE--YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD 196 (256)
T ss_pred --cCC--------C------CCcc--cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence 110 0 1111 432 333332221 246899999999999884
No 88
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=99.59 E-value=6.9e-14 Score=118.24 Aligned_cols=249 Identities=12% Similarity=0.064 Sum_probs=151.4
Q ss_pred CcccccccccccccccccCcCCCCCCEEEEEcCCChhHHHHHH-----HcCCCCCCCCCcEEEEEeCCCCCCCCCCCCee
Q 016047 1 MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAE-----ILPLPDTPGGPWKVYGVARRPKPNWNADHLVE 75 (396)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~-----~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~ 75 (396)
|+|++.+.++.. ++.++-+++|+|+..|.. ++-+ +.++..|+|+.++|.+.+. ++.
T Consensus 1 ~~w~~~~~~~~s-------------r~a~~~~~~g~i~~nl~~~~~~~H~t~-~~~a~~h~vtv~sR~pg~~-----rit 61 (315)
T KOG3019|consen 1 KVWFSFFNSGKS-------------RDAVSNWSNGIIRENLGSETSCCHDTN-VHSADNHAVTVLSRSPGKA-----RIT 61 (315)
T ss_pred CccceeecCCcc-------------ccCCCCccccchhccccCcccccccCC-CCcccccceEEEecCCCCc-----ccc
Confidence 678776665544 445566889999988876 3333 2222469999999998652 333
Q ss_pred EEEecCCChHHHHHHHhcCCCeeEEEEecc----CCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeec
Q 016047 76 YVQCDVSDPEETQAKLSQLTDVTHIFYVTW----TNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL 149 (396)
Q Consensus 76 ~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~----~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ 149 (396)
+-+.|..-.. -.|+.+++.++... ..+. -..+.....+..|+.|.++...+-...+-++.++++.+|.
T Consensus 62 w~el~~~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~ 135 (315)
T KOG3019|consen 62 WPELDFPGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYV 135 (315)
T ss_pred cchhcCCCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEec
Confidence 3333322111 01222222222111 1122 2344556667778889999988743455678889888885
Q ss_pred ccccccccCCCCCCCccCCCCCCCCCCcchhH--HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHh
Q 016047 150 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC 227 (396)
Q Consensus 150 ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~ 227 (396)
-|. ...++|+.+....+ +.+. -++-..+.......+.+++|.+.|.|.+.+....+..+| .
T Consensus 136 pS~---------s~eY~e~~~~qgfd--~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF------~ 198 (315)
T KOG3019|consen 136 PSE---------SQEYSEKIVHQGFD--ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF------Q 198 (315)
T ss_pred ccc---------ccccccccccCChH--HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh------h
Confidence 431 23455655433211 1111 222222222234489999999999996544333333333 2
Q ss_pred hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047 228 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED 298 (396)
Q Consensus 228 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~ 298 (396)
-+.|.| .|++.|+..|+|+.|. +..+.++..+ ....++.|-+.+++.+..||++.+.+.++.+.
T Consensus 199 ~g~GGP---lGsG~Q~fpWIHv~DL---~~li~~ale~-~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 199 MGAGGP---LGSGQQWFPWIHVDDL---VNLIYEALEN-PSVKGVINGVAPNPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred hccCCc---CCCCCeeeeeeehHHH---HHHHHHHHhc-CCCCceecccCCCccchHHHHHHHHHHhCCCc
Confidence 344656 7889999999999887 4444444444 45567899999999999999999999999774
No 89
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.57 E-value=7.9e-14 Score=125.82 Aligned_cols=157 Identities=17% Similarity=0.101 Sum_probs=105.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
+++||||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+.|++++..++++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAA-----DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999998 899999999986431 0 0123577899999999888776654
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+|.|+|+++...... +.....++.|+.++.++++++... ..+..+++++|+... .++.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~------~~~~----- 148 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG------VTGN----- 148 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh------ccCC-----
Confidence 478999987532211 123556899999999999888543 123567777764211 1110
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.+... |.. +.+..... ....+++++++||+.++|+
T Consensus 149 ---------~~~~~--y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~ 190 (246)
T PRK05653 149 ---------PGQTN--YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTD 190 (246)
T ss_pred ---------CCCcH--hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCc
Confidence 01111 332 33333322 1346899999999999994
No 90
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.9e-14 Score=130.32 Aligned_cols=159 Identities=14% Similarity=0.070 Sum_probs=105.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.++++||||||+|+||++++++|++ +|++|++++|+.... .....++.++.+|++|++++.++++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAE-----AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3458999999999999999999998 899999999975321 0011256889999999998877664
Q ss_pred --cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCC
Q 016047 93 --QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
++|.|+|+++...... ++..+.+++|+.++.++++++.+. ..+. .+++++|+.. ..+|.
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~------~~~~~--- 154 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA------GRLGY--- 154 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc------cccCC---
Confidence 5788999987541111 134677899999999999987542 1112 4455544211 01110
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ .... |+. +.++..... ...+++++++||+.++|+
T Consensus 155 ---~--------~~~~--y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~ 196 (264)
T PRK12829 155 ---P--------GRTP--YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGP 196 (264)
T ss_pred ---C--------CCch--hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCCh
Confidence 0 0011 443 333333221 245899999999999994
No 91
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.57 E-value=2.7e-14 Score=130.10 Aligned_cols=158 Identities=11% Similarity=0.007 Sum_probs=105.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
++++||||||+|+||.+++++|++ +|++|++++|+..... ....++.++.+|++|++++.+++.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLA-----EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999 8999999998754210 012357889999999988877665
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCCCCCC
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.+|.++|+++...... .+....+++|+.++.++++++.+.. ..-.+++++||.. ..++.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~------~~~~~------ 147 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA------GRRGE------ 147 (257)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH------hCCCC------
Confidence 3677999887532211 1456678999999999999886531 1123566665321 01110
Q ss_pred CccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 164 PFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ + ...|+. +.+.+.... ...++++++++|+.|+++
T Consensus 148 ------~--~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 189 (257)
T PRK07067 148 ------A--L--VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTP 189 (257)
T ss_pred ------C--C--CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccch
Confidence 0 1 112443 223222211 356899999999999993
No 92
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.56 E-value=6.2e-14 Score=127.09 Aligned_cols=215 Identities=16% Similarity=0.102 Sum_probs=129.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
++|++|||||+|+||.+++++|++ .|++|++++|..... . ....++.++.+|++|.+++..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAR-----EGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 458999999999999999999999 899999999975321 0 011356789999999988766555
Q ss_pred ---cCCCeeEEEEeccCC------C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047 93 ---QLTDVTHIFYVTWTN------R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~------~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
.+|.|+|+++..... . ......+++|+.++.++++++.+. ..+..+++++||...| ..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~- 151 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW-------LY- 151 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc-------CC-
Confidence 468899998753211 0 134456789999999999988764 1123467766643222 10
Q ss_pred CCCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCcee
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF 236 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 236 (396)
..+......+.+.+++.+.. ...++.+++++|+.+..+...... ...+.. ...+ ..+...
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~--~~~~--~~~~~~ 213 (250)
T PRK07774 152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVA--DMVK--GIPLSR 213 (250)
T ss_pred ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHH--HHHh--cCCCCC
Confidence 00101111222433333321 245799999999988773221111 111100 0111 112111
Q ss_pred cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047 237 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF 281 (396)
Q Consensus 237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~ 281 (396)
+ .+..+++..++.++.... ..|++||+.++..+
T Consensus 214 ---------~---~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 214 ---------M---GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred ---------C---cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 1 123445777777765432 35789999887654
No 93
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.56 E-value=2.7e-13 Score=124.96 Aligned_cols=157 Identities=17% Similarity=0.108 Sum_probs=105.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
+++||||||+|+||++++++|++ +|++|++++|++... . ....++..+.+|++|++++.++++ .
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALA-----AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHh-----CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999998 899999999976431 0 012357889999999998877665 3
Q ss_pred CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 94 LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
+|.|+|+|+...... + .....+++|+.|+.++++++... ..+..+++++||...+. + .|
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------~------~~- 145 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------T------MP- 145 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------C------CC-
Confidence 678999987543211 1 23556899999999999986442 11245677666432111 1 00
Q ss_pred cCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 166 TEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ ...|+. +.+...... ...|++++++||+.+.++
T Consensus 146 -------~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 146 -------G--IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred -------C--cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 1 111543 333322221 246899999999999774
No 94
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.55 E-value=2.4e-13 Score=125.49 Aligned_cols=157 Identities=15% Similarity=0.084 Sum_probs=103.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
+++++|||||+|+||+++++.|++ +|++|++++|++... .....+++++.+|++|++++.+ +.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~ 75 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAK-----KGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV 75 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence 357899999999999999999999 899999999975421 0112468899999999988765 43
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.|+|+++...... ......+++|+.++.++++++... ..+..+++++||... .+|.
T Consensus 76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~------~~~~-- 147 (280)
T PRK06914 76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG------RVGF-- 147 (280)
T ss_pred HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc------cCCC--
Confidence 3577889877533211 134556789999998888886432 122456776664211 1221
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
+ + ...|+. +.++.... ....+++++++||+.+.++
T Consensus 148 ----~--------~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 148 ----P--------G--LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred ----C--------C--CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 0 1 111442 33333322 1345899999999998884
No 95
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.54 E-value=1.6e-13 Score=125.06 Aligned_cols=158 Identities=9% Similarity=-0.006 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
|+++||||||+|+||.+++++|.+ +|++|++++|+.... . ....++.++.+|++|.+++..++.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 75 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAE-----EGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV 75 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence 578999999999999999999999 899999999875321 0 011357899999999988776654
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEeccceeecccccccccC
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
.+|.|+|+++...... ++....+++|+.++.++++++.+. ..+ -.+++++|+.. +.+|.
T Consensus 76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~------~~~~~- 148 (259)
T PRK12384 76 DEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS------GKVGS- 148 (259)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc------cccCC-
Confidence 3577999987543211 134567799999988888877653 112 23566555321 12221
Q ss_pred CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ . ...|+..| ++..+.. ...|+++.++||+.+++.
T Consensus 149 -----~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 149 -----K--------H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred -----C--------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 0 0 11144322 2222211 357899999999998873
No 96
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.54 E-value=3.6e-13 Score=122.37 Aligned_cols=157 Identities=11% Similarity=0.021 Sum_probs=102.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+++|+||||+|+||++++++|++ +|++|+++ .|+.... .. ....++++.+|++|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLAN-----DGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 58999999999999999999999 89998775 4543211 10 12357789999999998877666
Q ss_pred ---------cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047 93 ---------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 93 ---------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
.+|.|+|+|+...... + .....+++|+.++.++++++.+.-....+++++||...+ ..
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~-------~~ 153 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR-------LG 153 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc-------CC
Confidence 3677899887532211 1 225567899999999999887642223466666543222 11
Q ss_pred CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
. + ....|+. +.+...+.. ...++++++++|+.+.++
T Consensus 154 -----~---------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 196 (254)
T PRK12746 154 -----F---------T-GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTD 196 (254)
T ss_pred -----C---------C-CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCc
Confidence 0 0 0111442 333322221 246799999999999883
No 97
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3e-13 Score=123.27 Aligned_cols=215 Identities=15% Similarity=0.118 Sum_probs=129.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHhc
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ 93 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~~ 93 (396)
..++|++|||||+|+||++++++|++ .|++|+++.|+..... ....++.++.+|++|.+++.++++.
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAA-----HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 44678999999999999999999998 8999988877532110 0124678899999999988777654
Q ss_pred -------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCC--CcceEEEeccceeecccccccccC
Q 016047 94 -------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 94 -------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~--~~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
+|.|+|+|+...... +.....+++|+.++.++++++.+... .-.+++++++.. .+.+
T Consensus 81 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~-------~~~~- 152 (258)
T PRK09134 81 ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQR-------VWNL- 152 (258)
T ss_pred HHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchh-------hcCC-
Confidence 577999987432211 13466789999999999998876521 123444333210 1110
Q ss_pred CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI 232 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~ 232 (396)
.|. ...|+..| +.+.+..+ ..++.+..++|+.+....... ...+ ..... ..
T Consensus 153 -------------~p~-~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----~~~~---~~~~~--~~ 209 (258)
T PRK09134 153 -------------NPD-FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----PEDF---ARQHA--AT 209 (258)
T ss_pred -------------CCC-chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----hHHH---HHHHh--cC
Confidence 011 11265433 33322211 123899999999887621110 1111 11011 11
Q ss_pred CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHH
Q 016047 233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWK 284 (396)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~ 284 (396)
+ .+. ..++.++|.++++++..+...|+.|++.++..++|.
T Consensus 210 ~---~~~---------~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 210 P---LGR---------GSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred C---CCC---------CcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 1 111 133455688888877766667889998887665554
No 98
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.53 E-value=8.7e-14 Score=118.32 Aligned_cols=260 Identities=15% Similarity=0.141 Sum_probs=154.9
Q ss_pred ccccccccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEe-CCCCCCCCCCCCeeEEEecCCCh
Q 016047 7 GAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVA-RRPKPNWNADHLVEYVQCDVSDP 84 (396)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~ 84 (396)
+.+++.+.|+.... .+...+||||||-|.+|..++..|... -|-+ |+.-+ ++|+.... ..-.++..|+.|.
T Consensus 27 ~~v~~~A~FH~~s~-~~~~PrvLITG~LGQLG~~~A~LLR~~----yGs~~VILSDI~KPp~~V~--~~GPyIy~DILD~ 99 (366)
T KOG2774|consen 27 LPVDPLARFHTISQ-TQKAPRVLITGSLGQLGRGLASLLRYM----YGSECVILSDIVKPPANVT--DVGPYIYLDILDQ 99 (366)
T ss_pred ccCCcccccccccc-cCCCCeEEEecchHHHhHHHHHHHHHH----hCCccEehhhccCCchhhc--ccCCchhhhhhcc
Confidence 34556667887776 566679999999999999999999864 2444 55444 34443322 2345889999999
Q ss_pred HHHHHHHhcCCCeeEEEEecc----CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC
Q 016047 85 EETQAKLSQLTDVTHIFYVTW----TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 85 ~~~~~~~~~~~~V~h~a~~~~----~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
..+++.+-+.. |..++|.+. ....+-.....+|+.|.+|+++.+++++ ++-|+ .|+.++||+..|
T Consensus 100 K~L~eIVVn~R-IdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFV--------PSTIGAFGPtSP 168 (366)
T KOG2774|consen 100 KSLEEIVVNKR-IDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFV--------PSTIGAFGPTSP 168 (366)
T ss_pred ccHHHhhcccc-cceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC--eeEee--------cccccccCCCCC
Confidence 98888765433 344444322 2222444567899999999999999874 66555 233446775211
Q ss_pred CCCCccCCCCCCCCCCcchhH----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHH-HHhhhcCCCce
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGIPLR 235 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 235 (396)
..|...-+-..| ...|+. .+++.+++...+|+++-.+|...++...+.+........+.+- ++.++.-....
T Consensus 169 -RNPTPdltIQRP--RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCyl 245 (366)
T KOG2774|consen 169 -RNPTPDLTIQRP--RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYL 245 (366)
T ss_pred -CCCCCCeeeecC--ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCccccc
Confidence 111111111122 334664 5667777756789999999988888765433222222222222 23332211112
Q ss_pred ecCCccccceeeecccHHHHHHHHHHH--hcCCCCCCceeeecCCCeeeHHHHHHHHHHHh
Q 016047 236 FPGTKAAWECYSIASDADLIAEHQIWA--AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 294 (396)
Q Consensus 236 ~~g~~~~~~~~~~~~da~~la~~~i~~--~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~ 294 (396)
-|... ....+..|-. ++++.. +.++.-+.++||+++ -..|-.|+++.+.+..
T Consensus 246 rpdtr---lpmmy~~dc~---~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 246 RPDTR---LPMMYDTDCM---ASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVM 299 (366)
T ss_pred CCCcc---CceeehHHHH---HHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhC
Confidence 23332 2445555541 222222 334445678999974 7889999998887764
No 99
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.52 E-value=2e-13 Score=128.70 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
.+++||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.++++++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAK-----RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999875321 1 1123678999999999988777654
Q ss_pred ----CCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeec
Q 016047 94 ----LTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYL 149 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ 149 (396)
+|.|+|+|+..... . +.....+++|+.|+.++++++... +....+++++||..++.
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 77899988743211 1 134667899999999998877653 11124788888766554
No 100
>PRK06128 oxidoreductase; Provisional
Probab=99.52 E-value=1.3e-12 Score=121.91 Aligned_cols=157 Identities=13% Similarity=0.051 Sum_probs=105.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+|+||||||+|+||.+++++|++ .|++|++..|+.... . ....++.++.+|++|++++++++.
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAR-----EGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 47999999999999999999999 899998877653211 0 012356789999999988776654
Q ss_pred ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047 93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
.+|.|+|+|+...... ++....+++|+.|+.++++++...-.+-.+++++||...| ..
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~-------~~---- 198 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY-------QP---- 198 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc-------CC----
Confidence 4678899887532111 1456788999999999999987642222467766643322 11
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.+ . ...|+. +.+..... ....|+++.+++|+.|.++
T Consensus 199 -~~--------~--~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~ 241 (300)
T PRK06128 199 -SP--------T--LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTP 241 (300)
T ss_pred -CC--------C--chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCC
Confidence 00 0 111543 22222221 1346899999999999984
No 101
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.51 E-value=7e-13 Score=122.01 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=103.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.|++|||||+|+||.+++++|++ +|++|++++|+.... . ....+++++.+|++|++++.++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAA-----AGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 36999999999999999999998 899999999865321 0 011357788999999998877665
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.|+|+|+...... ......+++|+.++.++++++... .....+++++||...| ..
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~-------~~----- 152 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVAL-------RQ----- 152 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhc-------CC-----
Confidence 3577999987532211 133456799999999999887532 1123467766643222 11
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
.+ . ...|+. +.++..+.. ...|++++++||+.+..
T Consensus 153 ~~--------~--~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t 194 (274)
T PRK07775 153 RP--------H--MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT 194 (274)
T ss_pred CC--------C--cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccC
Confidence 00 0 111443 444433321 23589999999988755
No 102
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.3e-12 Score=118.17 Aligned_cols=164 Identities=13% Similarity=0.078 Sum_probs=103.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
|++++|||||+|+||++++++|++ +|+.|+.+.++.... .. ...++.++.+|++|.+++.+++.
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAAE-----RGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 567899999999999999999998 898887776543211 00 12357789999999988877665
Q ss_pred ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEeccceeecccccccc
Q 016047 93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAFG 156 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~g 156 (396)
.+|.|+|+++...... ++....+++|+.++.++++++.+.- .+-.+++++||... .++
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~------~~~ 149 (248)
T PRK06123 76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA------RLG 149 (248)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhh------cCC
Confidence 4677999987543211 1345678999999999988876541 11134665553211 222
Q ss_pred cCCCCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 157 KIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
. + .. ...........+.++..+.. ...+++++++||+.++|+
T Consensus 150 ~------~--~~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~ 193 (248)
T PRK06123 150 S------P--GE--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE 193 (248)
T ss_pred C------C--CC--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence 1 0 00 00101111222433333221 345899999999999994
No 103
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.51 E-value=3.6e-13 Score=121.99 Aligned_cols=157 Identities=11% Similarity=0.072 Sum_probs=105.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.+++++++.
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAE-----EGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999 899999999875321 00 12468899999999988877665
Q ss_pred --cCCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 --QLTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.|+|+++...... . .....+++|+.++.++++++... ..+..+++++||...|.+.
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~----------- 146 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS----------- 146 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC-----------
Confidence 3677889876432111 1 23456899999999998887642 1124567777653322110
Q ss_pred CCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ . ...|+..| +...+.. ...+++++++||+.++++
T Consensus 147 -~--------~--~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~ 188 (250)
T TIGR03206 147 -S--------G--EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA 188 (250)
T ss_pred -C--------C--CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence 0 0 11154322 2222221 234799999999999984
No 104
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.50 E-value=1.2e-12 Score=119.42 Aligned_cols=155 Identities=13% Similarity=0.029 Sum_probs=99.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
+|++|||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|++|.+++.++++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAA-----EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999 899999999974211 0 012357789999999987766555
Q ss_pred -cCCCeeEEEEeccC-C------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 -QLTDVTHIFYVTWT-N------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 -~~~~V~h~a~~~~~-~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.++|+|+.... . ..+....+++|+.++..+++++... ..+..+++++||...| +.
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~----- 150 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-------GI----- 150 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-------CC-----
Confidence 45778888763211 1 1134556788998887666555432 1123467766643221 10
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+... |+. +.+...+.. ...++++.+++|+.|+++
T Consensus 151 ----------~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 151 ----------NRVP--YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred ----------CCCc--cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 0011 443 333332221 345899999999999994
No 105
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.50 E-value=6.7e-13 Score=119.28 Aligned_cols=156 Identities=16% Similarity=0.079 Sum_probs=105.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
+++||||||+|+||.+++++|++ +|++|++++|++... .....+++++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAA-----RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHH-----CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 57999999999999999999998 899999999975431 1112356788999999988877665
Q ss_pred cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 93 QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
++|.|+|+++..... . +...+.+++|+.++.++++++.+. ..+..+++++||...| +. .
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~- 148 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL-------KA-----G- 148 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc-------cC-----C-
Confidence 467799987742211 1 123456789999999999887643 1236678877643322 21 0
Q ss_pred ccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 165 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+ + ...|.. +.++.... ....++++.++||+.+++
T Consensus 149 -----~--~--~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~ 189 (239)
T PRK12828 149 -----P--G--MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDT 189 (239)
T ss_pred -----C--C--cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence 0 1 111443 22333222 134689999999999998
No 106
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.50 E-value=4.2e-13 Score=123.14 Aligned_cols=156 Identities=19% Similarity=0.168 Sum_probs=107.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCCe
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV 97 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~V 97 (396)
+++|+||||+|+||++++++|.+ +|++|++++|++.... ...+++++++|++|+++++++++. +|.|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLAR-----AGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999999 8999999999864432 224788999999999988887765 5779
Q ss_pred eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047 98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 169 (396)
Q Consensus 98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~ 169 (396)
+|+|+...... ++....+++|+.|+.++++++... ..+..+++++||...+ . ..
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~-----~~------ 139 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF-------L-----PA------ 139 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc-------C-----CC------
Confidence 99987533211 134667899999999998876432 1235677777643211 1 00
Q ss_pred CCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 170 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 170 p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
|. ...|+. +.+..... .+..|+++++++|+.+.++
T Consensus 140 ---~~-~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 140 ---PY-MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred ---CC-ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence 10 111442 32222211 1456899999999998874
No 107
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.49 E-value=7.2e-13 Score=120.54 Aligned_cols=215 Identities=16% Similarity=0.079 Sum_probs=129.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
.+|+||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.++++++++.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQ-----AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999975321 10 113477899999999988777754
Q ss_pred ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047 94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
.|.|+|+++...... +.....+.+|+.++.++++++.+. .....+++++||...+
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~------------- 150 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA------------- 150 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-------------
Confidence 577888877532211 123556789999999999988764 1124567766642111
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 234 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 234 (396)
.+. + . ...|+. +.+.+.+.. ...|+++.++||+.+.++.-..... ...+. ..+.. ..|+
T Consensus 151 -~~~----~--~--~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~--~~~~~--~~~~ 216 (255)
T PRK07523 151 -LAR----P--G--IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFS--AWLEK--RTPA 216 (255)
T ss_pred -cCC----C--C--CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHH--HHHHh--cCCC
Confidence 000 0 1 112443 333332221 3568999999999998832111100 01110 00111 1121
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeee
Q 016047 235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK 282 (396)
Q Consensus 235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s 282 (396)
.......++|.++++++.... ..|+++++.++...|
T Consensus 217 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 217 ------------GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred ------------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 112234556777777765422 247889988765444
No 108
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.49 E-value=8.5e-13 Score=119.42 Aligned_cols=115 Identities=20% Similarity=0.139 Sum_probs=84.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
++++|||||+|+||++++++|++ +|++|+++.++.... . ....++.++.+|++|++++.++++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQ-----EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 899998776543211 0 0123578899999999988777765
Q ss_pred ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ....+.+++|+.++.++++++... .....+++++||
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 578999987533211 245667899999999999988753 112346666654
No 109
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.49 E-value=7.5e-13 Score=120.06 Aligned_cols=158 Identities=14% Similarity=0.039 Sum_probs=104.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.++++|||||+|+||++|+++|++ +|++|+++.|+.... .....++.++++|++|++++.++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAR-----EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-----CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975321 1112357899999999998877665
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.|+|+++...... +.....+.+|+.++.++.+++... ..+..+++++||... .+|.
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~------~~~~----- 147 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA------LAGG----- 147 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh------ccCC-----
Confidence 4678999987532211 134556899999997777665432 112456776664321 1111
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ ....|+. +.++..+.. ...+++++++||+.++++
T Consensus 148 ----------~-~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (252)
T PRK06138 148 ----------R-GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTP 189 (252)
T ss_pred ----------C-CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCc
Confidence 0 0111442 333333221 245899999999999884
No 110
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=3.6e-13 Score=122.16 Aligned_cols=214 Identities=11% Similarity=-0.012 Sum_probs=126.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+++||||||+|+||++++++|++ +|++|+++.|+..... ....++.++.+|+++++++..+++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAK-----EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 47999999999999999999998 8999888776532110 011356688999999987766655
Q ss_pred ---cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047 93 ---QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.+|.|+|+|+...... + .....+++|+.++.++++++.+.-..-.+++++||...| +.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------ 147 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-------RP------ 147 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-------CC------
Confidence 4688999987532211 1 124567999999999999887652222456666543222 11
Q ss_pred CccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047 164 PFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP 237 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 237 (396)
..+ ...|+. +.+...+..+ ..++.+.+++|+.+.+........... .. ....... +.
T Consensus 148 -------~~~--~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~~-----~~~~~~~--~~ 210 (252)
T PRK06077 148 -------AYG--LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG-MS-----EKEFAEK--FT 210 (252)
T ss_pred -------CCC--chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc-cc-----HHHHHHh--cC
Confidence 001 112553 3333333211 127899999999998732100000000 00 0000000 00
Q ss_pred CCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCe
Q 016047 238 GTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV 280 (396)
Q Consensus 238 g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~ 280 (396)
....+ .+..++|+.++.++..+...|++||+.++..
T Consensus 211 ----~~~~~---~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 211 ----LMGKI---LDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred ----cCCCC---CCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 00122 3444558888887766666789999988643
No 111
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.49 E-value=1.8e-12 Score=106.57 Aligned_cols=205 Identities=17% Similarity=0.142 Sum_probs=127.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 105 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~ 105 (396)
|||.|+||||.+|+++++++++ +||+|++++|++.+.. ..+++.+++.|+.|++.+.+.+.+.|.|+..++...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~-----RGHeVTAivRn~~K~~-~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALK-----RGHEVTAIVRNASKLA-ARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHh-----CCCeeEEEEeChHhcc-ccccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence 5899999999999999999999 9999999999986532 225788999999999999999999998888765332
Q ss_pred CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh----H
Q 016047 106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----L 181 (396)
Q Consensus 106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~----~ 181 (396)
.+.+.. .....+.|++..+.++ +.+++.+++. +| -|- ++...-.+.|..|. -||. +
T Consensus 75 ---~~~~~~---~~k~~~~li~~l~~ag--v~RllVVGGA----GS--L~i----d~g~rLvD~p~fP~--ey~~~A~~~ 134 (211)
T COG2910 75 ---SDNDEL---HSKSIEALIEALKGAG--VPRLLVVGGA----GS--LEI----DEGTRLVDTPDFPA--EYKPEALAQ 134 (211)
T ss_pred ---CChhHH---HHHHHHHHHHHHhhcC--CeeEEEEcCc----cc--eEE----cCCceeecCCCCch--hHHHHHHHH
Confidence 222222 2233566777777654 6666655542 12 111 01111233343332 2343 2
Q ss_pred HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccceeeecccHHHHHHHHH
Q 016047 182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECYSIASDADLIAEHQI 260 (396)
Q Consensus 182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~~~~~da~~la~~~i 260 (396)
.+.|...- ....++||.+-|+..+-|+++.. + + + ++. .+..-..+. +.+...|. |-+++
T Consensus 135 ae~L~~Lr-~~~~l~WTfvSPaa~f~PGerTg-~----y-------r-lggD~ll~n~~G~---SrIS~aDY---AiA~l 194 (211)
T COG2910 135 AEFLDSLR-AEKSLDWTFVSPAAFFEPGERTG-N----Y-------R-LGGDQLLVNAKGE---SRISYADY---AIAVL 194 (211)
T ss_pred HHHHHHHh-hccCcceEEeCcHHhcCCccccC-c----e-------E-eccceEEEcCCCc---eeeeHHHH---HHHHH
Confidence 34444432 45569999999999999543311 1 1 0 122 223222233 34444444 66777
Q ss_pred HHhcCCCCCCceeeec
Q 016047 261 WAAVDPYAKNEAFNCN 276 (396)
Q Consensus 261 ~~~~~~~~~g~~~ni~ 276 (396)
.-...+....+.|-+.
T Consensus 195 De~E~~~h~rqRftv~ 210 (211)
T COG2910 195 DELEKPQHIRQRFTVA 210 (211)
T ss_pred HHHhcccccceeeeec
Confidence 7677777777777653
No 112
>PRK09186 flagellin modification protein A; Provisional
Probab=99.48 E-value=5.3e-13 Score=121.41 Aligned_cols=165 Identities=13% Similarity=0.079 Sum_probs=103.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
+|+||||||+|+||.++++.|++ +|++|++++|++... ......+.++.+|++|++++.++++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~-----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILE-----AGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999999 899999999875431 11123466789999999988777764
Q ss_pred -----CCCeeEEEEeccC-------CC--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047 94 -----LTDVTHIFYVTWT-------NR--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 94 -----~~~V~h~a~~~~~-------~~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
+|.|+|+|+.... .. +.....+++|+.++..+++++... ..+..+++++||...+. +.
T Consensus 79 ~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~ 152 (256)
T PRK09186 79 EKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV------AP 152 (256)
T ss_pred HHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc------cc
Confidence 6778998753211 01 124556788888877666655443 11245777776532221 11
Q ss_pred CCCCCCCccCCCCCCCCCCcchhHHH-----HHH---HHhhcCCCeeEEEEcCCceee
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILF---EEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~---~~~~~~~~~~~~ilRp~~v~G 207 (396)
.....++.+..... .|+..| +.. ... ...++++++++|+.+++
T Consensus 153 ----~~~~~~~~~~~~~~--~Y~~sK~a~~~l~~~la~e~-~~~~i~v~~i~Pg~~~~ 203 (256)
T PRK09186 153 ----KFEIYEGTSMTSPV--EYAAIKAGIIHLTKYLAKYF-KDSNIRVNCVSPGGILD 203 (256)
T ss_pred ----cchhccccccCCcc--hhHHHHHHHHHHHHHHHHHh-CcCCeEEEEEecccccC
Confidence 11112332221111 255322 222 222 35689999999998877
No 113
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.48 E-value=3e-12 Score=115.60 Aligned_cols=115 Identities=19% Similarity=0.087 Sum_probs=84.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+++||||||||+||.+++++|++ +|++|+++.|++... . ....++.++.+|+++++++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAA-----QGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999 899998888875421 0 112467889999999998877665
Q ss_pred ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... ......+.+|+.++.++++++... .....+++++|+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 4678999987533211 134556789999999999988764 122456776664
No 114
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2.6e-12 Score=116.22 Aligned_cols=158 Identities=18% Similarity=0.097 Sum_probs=105.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
++++||||||+|+||.+++++|++ +|++|++++|..... . ....+++++.+|+.|++++.+++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAA-----DGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD 79 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 468999999999999999999998 899999987743211 0 012367899999999988877664
Q ss_pred -------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEeccceeecccccccc
Q 016047 93 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTGTKHYLGPFEAFG 156 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~~~~y~ss~~~~g 156 (396)
.+|.|+|+++..... . .+....+++|+.++.++++++. .. .....+++++||...+ ++
T Consensus 80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~ 153 (249)
T PRK12827 80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV------RG 153 (249)
T ss_pred HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc------CC
Confidence 467899998753311 1 1345678999999999999887 21 1124567776643322 11
Q ss_pred cCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 157 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 157 ~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
. .+ ...|.. +.+...... ...+++++++||+.+.++
T Consensus 154 ~--------------~~--~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 196 (249)
T PRK12827 154 N--------------RG--QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTP 196 (249)
T ss_pred C--------------CC--CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCC
Confidence 0 01 111443 222222211 335899999999999994
No 115
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.47 E-value=1.2e-12 Score=118.61 Aligned_cols=115 Identities=17% Similarity=0.105 Sum_probs=84.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~----- 93 (396)
+++||||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|+.|++++..+++.
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAA-----EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 47999999999999999999998 899999999986421 00123577999999999988877654
Q ss_pred --CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 --LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... +.....+++|+.++.++++.+... ..+..+++++||
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 141 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAS 141 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 477899877532211 134567899999988887766643 123566777664
No 116
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.47 E-value=5.3e-13 Score=121.48 Aligned_cols=116 Identities=11% Similarity=0.011 Sum_probs=84.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh-cCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS-QLT 95 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~-~~~ 95 (396)
|+++||||||||+||++++++|++ .|++|++++|++... .....++.++.+|+.|++++..++. ++|
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLAR-----KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 567999999999999999999998 899999999975321 0012357899999999999988876 788
Q ss_pred CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.|+|+|+...... +.....+++|+.++.++.+++.+. ..+..+++++||
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS 132 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSS 132 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcC
Confidence 8999987532211 123456788999877666544322 112467777764
No 117
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.46 E-value=1.4e-12 Score=118.09 Aligned_cols=212 Identities=11% Similarity=0.017 Sum_probs=125.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
++++|||||+|+||.+++++|++ .|++|+++ .|+.... . ....++.++.+|++|++++.++++.
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAE-----EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 37999999999999999999999 89998764 5654211 0 0124578899999999988777764
Q ss_pred ----CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCC
Q 016047 94 ----LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+|.|+|+++...... + .....+++|+.++.++++++.+.. .+..+|+++||...+ .
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~----- 146 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI-------R----- 146 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc-------c-----
Confidence 577899876432211 1 223457899999999999887642 224578877643211 0
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL 234 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~ 234 (396)
+ ..+.. .|+. +.+++.... ...++++++++|+.+..+........ ..+ ...... ..+
T Consensus 147 --~------~~~~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~- 210 (250)
T PRK08063 147 --Y------LENYT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EEL--LEDARA--KTP- 210 (250)
T ss_pred --C------CCCcc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHH--HHHHhc--CCC-
Confidence 0 00111 1443 444333221 24689999999999977322111100 001 000000 101
Q ss_pred eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047 235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV 280 (396)
Q Consensus 235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~ 280 (396)
. ....+..++|+.+++++..+. ..|+.+++.++..
T Consensus 211 -~----------~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 211 -A----------GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred -C----------CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 0 112344556888877765433 3478888876644
No 118
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.46 E-value=6.6e-13 Score=120.98 Aligned_cols=157 Identities=15% Similarity=0.019 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
|+++||||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|++|++++.++++.
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 75 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYAR-----QGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA 75 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh
Confidence 457999999999999999999998 899999999975321 11112688999999999988776654
Q ss_pred ---CCCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047 94 ---LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+|.++|+++..... . ++....+++|+.|+.++++++... ..+..+++.+||... .++.
T Consensus 76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~------~~~~---- 145 (257)
T PRK07024 76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAG------VRGL---- 145 (257)
T ss_pred CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhh------cCCC----
Confidence 57788887753211 1 134567899999999877743321 112356666653221 1110
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+. ...|+. +.+..... .+..|++++++||+.|.+
T Consensus 146 -----------~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 186 (257)
T PRK07024 146 -----------PG-AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT 186 (257)
T ss_pred -----------CC-CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcC
Confidence 10 112543 22222211 145689999999999987
No 119
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.46 E-value=5e-13 Score=121.74 Aligned_cols=158 Identities=12% Similarity=0.043 Sum_probs=106.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
.+|+||||||+|+||++++++|++ +|++|++++|++... . ....++.++.+|++|++++..++.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAAR-----AGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999975321 0 012357899999999988776664
Q ss_pred ---cCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCC
Q 016047 93 ---QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
.+|.|+|+|+..... . ......+++|+.++..+++++.... ....+++++||...+ .
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~-------~----- 146 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR-------H----- 146 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc-------c-----
Confidence 457899998643221 1 1446678999999999999887541 112467766642211 1
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+. .+... |.. +.++..+.. ...++++.++||+.++++
T Consensus 147 --~~------~~~~~--Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~ 190 (258)
T PRK07890 147 --SQ------PKYGA--YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGD 190 (258)
T ss_pred --CC------CCcch--hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcH
Confidence 00 01111 442 333333221 345799999999999994
No 120
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.45 E-value=5.1e-12 Score=113.30 Aligned_cols=151 Identities=18% Similarity=0.197 Sum_probs=102.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh------cCCCee
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDVT 98 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~~~V~ 98 (396)
+|+||||||+|+||.+++++|++ +|++|++++|++.... ..+++.+|++|++++.+++. ++|.|+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLAN-----LGHQVIGIARSAIDDF----PGELFACDLADIEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCccccc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEE
Confidence 47899999999999999999999 8999999999865422 23688999999988777665 467899
Q ss_pred EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
|+++...... .+....+++|+.++.++.+++... ..+..+++++||...| +. +
T Consensus 74 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------~------ 134 (234)
T PRK07577 74 NNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-------GA------L------ 134 (234)
T ss_pred ECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-------CC------C------
Confidence 9987533211 134556889999988887766442 1124577777643222 21 0
Q ss_pred CCCCCCcchhH-----HHHHHH---HhhcCCCeeEEEEcCCceeec
Q 016047 171 RLDAPNFYYTL-----EDILFE---EVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~---~~~~~~~~~~~ilRp~~v~G~ 208 (396)
. ...|.. +.+... .+ ...|++++++||+.+..+
T Consensus 135 --~--~~~Y~~sK~a~~~~~~~~a~e~-~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 135 --D--RTSYSAAKSALVGCTRTWALEL-AEYGITVNAVAPGPIETE 175 (234)
T ss_pred --C--chHHHHHHHHHHHHHHHHHHHH-HhhCcEEEEEecCcccCc
Confidence 0 111443 222222 22 346899999999998873
No 121
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.45 E-value=6.1e-13 Score=122.57 Aligned_cols=155 Identities=17% Similarity=0.156 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--------C
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--------~ 94 (396)
|+++||||||+|+||.+++++|.+ +|++|++++|++... .....+++++.+|++|.+++.++++. +
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~-----~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQS-----DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 568999999999999999999998 899999999976431 01123678899999999887766653 4
Q ss_pred CCeeEEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 95 TDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
|.|+|+|+...... +.....+++|+.| ++++++.+++.+ ..+++++||.. |.. +
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~-----~ 141 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSIL---------GLV-----P 141 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChh---------hcC-----C
Confidence 66888876432211 1235578999999 666666666543 45677776422 210 0
Q ss_pred ccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 165 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
. .. ...|+. +.+..... ....|+++++++|+.|-.
T Consensus 142 ~------~~--~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T 183 (277)
T PRK05993 142 M------KY--RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET 183 (277)
T ss_pred C------Cc--cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence 0 01 112553 22222211 145789999999998865
No 122
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.2e-12 Score=116.77 Aligned_cols=111 Identities=21% Similarity=0.140 Sum_probs=80.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhc---CCCee
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVT 98 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~ 98 (396)
.|+||||||+|+||++++++|++ + ++|++++|++... ....++++++++|+.|++++.++++. +|.|+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~-----~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAP-----T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHh-----h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999998 7 8999999975431 00113678999999999999888874 77899
Q ss_pred EEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecc
Q 016047 99 HIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 99 h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
|+++...... ......+++|+.+ ++++++++++. ..+++++||
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss 129 (227)
T PRK08219 77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS 129 (227)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence 9987532211 1234567888888 45555555443 345666654
No 123
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.45 E-value=2.5e-12 Score=116.64 Aligned_cols=155 Identities=14% Similarity=0.056 Sum_probs=105.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCCe
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV 97 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~V 97 (396)
+|++|||||+|+||++++++|++ +|++|++++|+.... ...++.++++|++|++++.++++. +|.|
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVE-----AGAKVIGFDQAFLTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecchhhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47999999999999999999999 899999999976221 124678999999999988877654 6789
Q ss_pred eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047 98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM 169 (396)
Q Consensus 98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~ 169 (396)
+|+++...... .+....+++|+.++.++++++... .....+++++|+.... .+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~--------------~~~---- 142 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH--------------VPR---- 142 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc--------------cCC----
Confidence 99877532211 145567899999999999987643 1123456666532111 010
Q ss_pred CCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 170 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 170 p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
.+ ...|+. +.+...... ...++++.+++|+.++++
T Consensus 143 --~~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~ 184 (252)
T PRK08220 143 --IG--MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTD 184 (252)
T ss_pred --CC--CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcch
Confidence 01 111442 333322220 246899999999999994
No 124
>PRK06194 hypothetical protein; Provisional
Probab=99.44 E-value=2.4e-12 Score=119.19 Aligned_cols=100 Identities=19% Similarity=0.001 Sum_probs=76.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
+++||||||+|+||++++++|++ +|++|++++|+.... .. ...++.++.+|++|.+++.++++.
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAA-----LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999 899999999874321 00 123577899999999988877764
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHH
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV 129 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~ 129 (396)
+|.|+|+|+...... .+....+++|+.|+.++++++
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 125 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence 688999988643311 134556899999999976664
No 125
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.44 E-value=2.3e-12 Score=116.36 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=105.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH 99 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h 99 (396)
+++++||||+|+||.++++.|++ +|++|++++|++... .....+..++.+|+++.+++.+++.. +|.|+|
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQ-----RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 47999999999999999999998 899999999975321 00112467889999999888877764 678999
Q ss_pred EEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--C-CcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 100 IFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--P-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 100 ~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+++...... .+....+.+|+.++.++++++.+.. . ...+++++||...| ++. +
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~------~------ 145 (245)
T PRK07060 84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL------VGL------P------ 145 (245)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc------CCC------C------
Confidence 887532211 1345567899999999999887641 1 12467766643222 110 0
Q ss_pred CCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 171 RLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
. ...|.. +.+++.+.. ...+++++.+||+.+.++
T Consensus 146 --~--~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~ 186 (245)
T PRK07060 146 --D--HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP 186 (245)
T ss_pred --C--CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCc
Confidence 0 111442 443333321 245799999999999984
No 126
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.43 E-value=2e-12 Score=120.90 Aligned_cols=119 Identities=14% Similarity=0.055 Sum_probs=86.3
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHH
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKL 91 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~ 91 (396)
++..+|+||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|+.|.+++++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~ 86 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAA-----KGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAA 86 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHH
Confidence 445668999999999999999999999 899999999974321 0 01246788999999999887765
Q ss_pred h-------cCCCeeEEEEeccCCC----ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccce
Q 016047 92 S-------QLTDVTHIFYVTWTNR----STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTK 146 (396)
Q Consensus 92 ~-------~~~~V~h~a~~~~~~~----~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~ 146 (396)
. .+|.|+|+|+...... +.....+++|+.| ++.+++.+++.+ ..+++++||..
T Consensus 87 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~ 154 (306)
T PRK06197 87 DALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGG 154 (306)
T ss_pred HHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHH
Confidence 5 3677999987533221 2345678999999 666666665532 35777777543
No 127
>PRK06196 oxidoreductase; Provisional
Probab=99.43 E-value=1.4e-12 Score=122.52 Aligned_cols=169 Identities=16% Similarity=0.004 Sum_probs=105.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
.+++||||||+|+||.+++++|++ .|++|++++|++.... ....++.++.+|++|.+++++++. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~-----~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQ-----AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999 8999999999754210 011247899999999998877664 4
Q ss_pred CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047 94 LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE 167 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E 167 (396)
+|.|+|+|+...... +.....+++|+.|+.++++++... .....+++++||...+. +... ......
T Consensus 100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~------~~~~--~~~~~~ 171 (315)
T PRK06196 100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRR------SPIR--WDDPHF 171 (315)
T ss_pred CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhcc------CCCC--ccccCc
Confidence 677889887532211 134667899999966665544332 11135677776543221 1100 000011
Q ss_pred CCCCCCCCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceeec
Q 016047 168 DMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 168 ~~p~~~~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
..+..+ ...|+..|.. .... ...|++++++||+.|.++
T Consensus 172 ~~~~~~--~~~Y~~SK~a~~~~~~~la~~~-~~~gi~v~~v~PG~v~t~ 217 (315)
T PRK06196 172 TRGYDK--WLAYGQSKTANALFAVHLDKLG-KDQGVRAFSVHPGGILTP 217 (315)
T ss_pred cCCCCh--HHHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeCCcccCC
Confidence 111111 1236643332 2222 456899999999999884
No 128
>PRK08264 short chain dehydrogenase; Validated
Probab=99.42 E-value=3.3e-12 Score=114.88 Aligned_cols=157 Identities=18% Similarity=0.063 Sum_probs=105.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH 99 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h 99 (396)
++++||||||+|+||++++++|++ +|+ +|++++|++........+++++.+|+.|++++.+++.. +|.|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLA-----RGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 357999999999999999999998 898 89999998654221224788999999999998887764 677999
Q ss_pred EEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 100 IFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 100 ~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+++..... . ++....+++|+.++.++++++.+. .....+++++||...| .. .
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-------~~-----~------- 140 (238)
T PRK08264 80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW-------VN-----F------- 140 (238)
T ss_pred CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc-------cC-----C-------
Confidence 88752211 1 134566889999999999987643 1124567766543221 10 0
Q ss_pred CCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 171 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 171 ~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+ ....|+. +.+..... ....+++++++||+.+.+
T Consensus 141 --~-~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t 181 (238)
T PRK08264 141 --P-NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT 181 (238)
T ss_pred --C-CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence 0 0112443 33332221 134589999999998876
No 129
>PRK06182 short chain dehydrogenase; Validated
Probab=99.42 E-value=1.2e-12 Score=120.34 Aligned_cols=154 Identities=21% Similarity=0.160 Sum_probs=102.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTD 96 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~ 96 (396)
+++|+||||+|+||.+++++|++ +|++|++++|+..... ....+++++.+|++|++++.++++ ++|.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAA-----QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47999999999999999999998 8999999999764210 011357899999999998877776 5788
Q ss_pred eeEEEEeccCCC------ccHHHHHHhHHHHH----HHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047 97 VTHIFYVTWTNR------STEAENCKINGSMF----RNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 166 (396)
Q Consensus 97 V~h~a~~~~~~~------~~~~~~~~~nv~gt----~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~ 166 (396)
|+|+|+...... ++....+++|+.++ +.++..+++.+ ..+++++||.. +.. ..
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~---~~--- 140 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISSMG---------GKI---YT--- 140 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchh---------hcC---CC---
Confidence 999887533211 13566789999985 44445555432 45677666421 100 00
Q ss_pred CCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047 167 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 167 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
+. ...|+..|. +.... ...|++++++||+.+..+
T Consensus 141 ------~~-~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 141 ------PL-GAWYHATKFALEGFSDALRLEV-APFGIDVVVIEPGGIKTE 182 (273)
T ss_pred ------CC-ccHhHHHHHHHHHHHHHHHHHh-cccCCEEEEEecCCcccc
Confidence 10 111443222 22222 457899999999999873
No 130
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.2e-12 Score=116.87 Aligned_cols=156 Identities=15% Similarity=0.003 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
++|++|||||+|+||++++++|.+ +|++|++++|+.... .. ...++.++.+|++|++++.+++..
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFAR-----RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999 899999999875321 00 113577899999999988776654
Q ss_pred ----CCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047 94 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
+|.|+|+|+..... . +.....+++|+.|+.++++++... ...-.+++++||...+ .+
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~-------~~--- 149 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL-------VP--- 149 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc-------cC---
Confidence 57789988753221 1 134556799999999999887532 1113467766543222 10
Q ss_pred CCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047 161 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
. + ....|+..|. +...+ ...|+++++++|+.+.+
T Consensus 150 --~---------~-~~~~Y~asK~a~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t 191 (275)
T PRK05876 150 --N---------A-GLGAYGVAKYGVVGLAETLAREV-TADGIGVSVLCPMVVET 191 (275)
T ss_pred --C---------C-CCchHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEeCcccc
Confidence 0 1 0112553322 22222 34689999999999877
No 131
>PLN02253 xanthoxin dehydrogenase
Probab=99.42 E-value=8.8e-12 Score=115.03 Aligned_cols=158 Identities=15% Similarity=0.069 Sum_probs=104.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
++|++|||||+|+||.+++++|++ .|++|++++|+.... .....++.++++|++|++++.+++.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHK-----HGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999864321 1112367899999999998877776
Q ss_pred --cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCC
Q 016047 93 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+|.|+|+|+...... ++....+++|+.|+.++++++.+.. .+-.++++++|.. ..++.
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~------~~~~~--- 162 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA------SAIGG--- 162 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh------hcccC---
Confidence 4788999987532210 1346678999999999998876531 1123455544311 11221
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ . ...|+. +.+...+.. ...++++..++|+.+..+
T Consensus 163 ---~---------~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 163 ---L---------G-PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred ---C---------C-CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 0 0 011443 333333221 245799999999998774
No 132
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1e-11 Score=115.23 Aligned_cols=157 Identities=14% Similarity=0.112 Sum_probs=104.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+|+||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+.+.++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~-----~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAK-----EGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999 899999999875321 0 012357789999999988777664
Q ss_pred ---cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.|+|+|+...... +.....+++|+.++.++++++.+.-.+-.+++++||...|..
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~------------ 188 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG------------ 188 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC------------
Confidence 3678999987532211 133567899999999999988764111246676665433211
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
.+. ...|+. +.+...+.. ...|+++..++|+.+..+
T Consensus 189 ~~~----------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 189 NET----------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP 231 (290)
T ss_pred CCC----------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence 000 011442 222222221 245899999999999883
No 133
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.41 E-value=3e-12 Score=115.23 Aligned_cols=115 Identities=20% Similarity=0.105 Sum_probs=85.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
++++|||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+++++++.++++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAK-----EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999998 899999999975321 0 012367889999999998877776
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... .+..+.+++|+.++.++++++... .....+++++|+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss 143 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISS 143 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcc
Confidence 5788999987543211 123566899999999998887643 122456666654
No 134
>PRK08324 short chain dehydrogenase; Validated
Probab=99.41 E-value=6.8e-12 Score=129.48 Aligned_cols=220 Identities=15% Similarity=0.099 Sum_probs=130.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.+++||||||+|+||.+++++|.+ .|++|++++|++... .....++.++.+|++|++++.++++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~-----~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAA-----EGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999998 899999999976421 1111367899999999988877665
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCCC
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
++|.|+|+++...... ......+++|+.|+.++++++.+. .... .+++++||...+ ++
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~------~~----- 564 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV------NP----- 564 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc------CC-----
Confidence 4688999987533211 134567899999999998877643 1112 456666542211 11
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCcee-ecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF-GFSPYSLMNLVGALCVYAAVCKHEGIP 233 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~i~~~~~~~ 233 (396)
. + ....|+. +.++..+.. ...|+++.+++|+.|| +..... ...... . ....+.+
T Consensus 565 -~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~~-~----~~~~g~~ 626 (681)
T PRK08324 565 -G---------P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIEA-R----AAAYGLS 626 (681)
T ss_pred -C---------C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhhh-h----hhhccCC
Confidence 0 0 0112553 333333221 3457999999999998 632111 100000 0 0001111
Q ss_pred c----eecCCccccceeeecccHHHHHHHHHHHhc--CCCCCCceeeecCCCe
Q 016047 234 L----RFPGTKAAWECYSIASDADLIAEHQIWAAV--DPYAKNEAFNCNNGDV 280 (396)
Q Consensus 234 ~----~~~g~~~~~~~~~~~~da~~la~~~i~~~~--~~~~~g~~~ni~~~~~ 280 (396)
. .+.+.+.....+.+ +.++|.++++++. .....|++|++.++..
T Consensus 627 ~~~~~~~~~~~~~l~~~v~---~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 627 EEELEEFYRARNLLKREVT---PEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred hHHHHHHHHhcCCcCCccC---HHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 0 01122222223333 4455788777763 3344578999987754
No 135
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.41 E-value=1.3e-11 Score=111.44 Aligned_cols=158 Identities=13% Similarity=0.114 Sum_probs=103.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
|.++||||||+|+||.+++++|.+ +|++|++++|++... . ....++.++.+|+.|.+++.++++.
T Consensus 1 ~~k~vlItG~s~~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELLN-----DGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 457999999999999999999998 799999999874211 0 0123578999999999888776654
Q ss_pred -----CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047 94 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 94 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
+|.|+|+++..... .+.....+++|+.++.++++++.+. .....+++++||...+ +.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~-------~~--- 145 (245)
T PRK12824 76 EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL-------KG--- 145 (245)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc-------cC---
Confidence 57788887643211 1134567899999998886655332 1124577777643222 10
Q ss_pred CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.+ ..+ .|...| +.+... ....++++++++|+.+.++
T Consensus 146 --~~--------~~~--~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 188 (245)
T PRK12824 146 --QF--------GQT--NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP 188 (245)
T ss_pred --CC--------CCh--HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCc
Confidence 00 001 154433 222211 1355799999999999873
No 136
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.40 E-value=1.5e-11 Score=111.15 Aligned_cols=162 Identities=14% Similarity=0.122 Sum_probs=99.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhcC---
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQL--- 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~~--- 94 (396)
++||||||+|+||.+++++|++ +|++|+++. |++... . ....++.++++|+.|++++.++++.+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQ-----EGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 5899999999999999999998 899998754 443211 0 01135778999999999888777653
Q ss_pred ----CCeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEeccceeecccccccccC
Q 016047 95 ----TDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 95 ----~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
|.|+|+++....... +....+++|+.++.++++++... ..+-.+++++||...+ ++.
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~------~~~- 149 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR------LGA- 149 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------cCC-
Confidence 568888764322111 23467899999998777765443 1112456766643211 111
Q ss_pred CCCCCCccCCCCCCCCCCcchhHHHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
| .. ..+........+.++.... ....+++++++||+.++++
T Consensus 150 -----~--~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~ 192 (247)
T PRK09730 150 -----P--GE--YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTE 192 (247)
T ss_pred -----C--Cc--ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCc
Confidence 0 00 0010111112233332221 0346899999999999995
No 137
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=1.4e-11 Score=111.31 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
.|+++||||||||+||.+++++|++ .|++|+++ +|++... . ....++.++.+|++|++++.+++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAK-----EGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3457999999999999999999998 89999988 8865321 0 012357899999999998877665
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... +.....+.+|+.++.++++++... ..+..+++++||
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 5788999987542111 134567899999988888877653 112456776664
No 138
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.40 E-value=3.8e-12 Score=114.73 Aligned_cols=155 Identities=17% Similarity=0.084 Sum_probs=102.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHhcC----CCee
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQL----TDVT 98 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~~~----~~V~ 98 (396)
++||||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|++|.++++++++.+ |.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAK-----QGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence 6899999999999999999998 899999999975321 0 01235789999999999998888764 4466
Q ss_pred EEEEeccC-CC---c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047 99 HIFYVTWT-NR---S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL 172 (396)
Q Consensus 99 h~a~~~~~-~~---~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~ 172 (396)
|.++.... .. + .....+++|+.|+.++++++...-.+-.+++.+||.. +.++ .
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~------~~~~------~--------- 135 (240)
T PRK06101 77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA------SELA------L--------- 135 (240)
T ss_pred EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh------hccC------C---------
Confidence 66653211 11 1 2356789999999999998876411123455554311 0111 0
Q ss_pred CCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 173 DAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 173 ~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+. ...|+. +.+...+. ....|++++++||+.|++
T Consensus 136 ~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t 176 (240)
T PRK06101 136 PR-AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVAT 176 (240)
T ss_pred CC-CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCC
Confidence 00 112443 22222111 145689999999999988
No 139
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.40 E-value=2e-12 Score=116.20 Aligned_cols=116 Identities=22% Similarity=0.082 Sum_probs=85.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
++++||||||+|+||++++++|++ .|++|++++|++... .....+++++.+|+.|.+++.++++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLA-----EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999998 799999999976321 1011467889999999998877665
Q ss_pred --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 144 (396)
.+|.|+|+++..... .++....+++|+.++.++++++.+.. ....+++++|+
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISS 140 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECC
Confidence 578899987643221 11345678999999999988876531 12456776654
No 140
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.39 E-value=1.9e-11 Score=109.77 Aligned_cols=112 Identities=21% Similarity=0.132 Sum_probs=83.1
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHhc------
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ------ 93 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~~------ 93 (396)
||||||+|+||.+++++|++ +|++|++++|+.... .. ...++.++.+|++|+++++++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAK-----EGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 68999999999999999999 899999999875221 00 112477899999999988777654
Q ss_pred -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047 94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 144 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ......+++|+.++.++++++.+.. ....+++++||
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 135 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISS 135 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 478999987532211 1346678999999999999887641 22457777664
No 141
>PRK05717 oxidoreductase; Validated
Probab=99.39 E-value=1.8e-12 Score=117.94 Aligned_cols=162 Identities=14% Similarity=0.079 Sum_probs=105.9
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
++..+|+||||||+|+||++++++|++ .|++|++++|+.... .....++.++.+|+++++++.+++..
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIA-----EGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 344568999999999999999999998 799999998864321 00123578899999999877554433
Q ss_pred ----CCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCC
Q 016047 94 ----LTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
+|.|+|+|+...... .+....+++|+.++.++++++.+. ..+..+++++||...+ ++.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~------~~~--- 151 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR------QSE--- 151 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc------CCC---
Confidence 578999987542211 134577899999999999998753 1112456666542211 110
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecC
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFS 209 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~ 209 (396)
+ . ...|+. +.+...+..+ ..++++..++|+.+.++.
T Consensus 152 ---~---------~-~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 152 ---P---------D-TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred ---C---------C-CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 0 0 011543 3333333211 235899999999999843
No 142
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.39 E-value=3.3e-12 Score=115.65 Aligned_cols=158 Identities=15% Similarity=0.037 Sum_probs=103.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
++++||||||+|+||++++++|++ +|++|++++|+..... ....++.++++|++|.+++..++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLA-----EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 357999999999999999999999 8999999998743210 001357789999999876654433
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 166 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~ 166 (396)
.+|.|+|+++...... +.....+++|+.++.++++++.+.-....++++++| ..+.+|.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S------~~~~~~~--------- 144 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGS------INAHIGM--------- 144 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec------hHhccCC---------
Confidence 4678999987533211 134567899999999999999753111233443332 1112221
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 167 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 167 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ ....|+. +.++..+.. ...++++.++||+.++++
T Consensus 145 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 145 ------P-NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred ------C-CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 0 0112553 333332221 345899999999999984
No 143
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.39 E-value=7.4e-12 Score=113.33 Aligned_cols=158 Identities=16% Similarity=0.056 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
|++++|||||+|+||.+++++|++ +|++|++++|++... .....+++++.+|++|++++.++++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAA-----KGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 467999999999999999999998 789999999976321 0012367889999999987766554
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.|+|+|+...... ......+++|+.++.++++++... ..+..+++++||... .+|.
T Consensus 76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~-- 147 (248)
T PRK08251 76 RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA------VRGL-- 147 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc------ccCC--
Confidence 4677888876432211 123456899999999888877532 123456776664221 1111
Q ss_pred CCCCCccCCCCCCCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceee
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
+.....|+..|. ...... ...++++++++|+.+.+
T Consensus 148 -------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t 189 (248)
T PRK08251 148 -------------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS 189 (248)
T ss_pred -------------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcc
Confidence 001112553322 222211 34579999999998877
No 144
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.39 E-value=3.8e-12 Score=116.12 Aligned_cols=114 Identities=17% Similarity=0.064 Sum_probs=84.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhc-------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ------- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~------- 93 (396)
|++|||||||+||.+++++|++ +|++|++++|++... .....+++++.+|++|.+++.+++..
T Consensus 2 k~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAA-----EGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999 899999999976431 01124688999999999888776653
Q ss_pred -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+|+...... ++....+++|+.++.++++++... .....+++++||
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 136 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS 136 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 477999887533211 134667899999999999887543 112355666654
No 145
>PRK12743 oxidoreductase; Provisional
Probab=99.39 E-value=2.7e-11 Score=110.25 Aligned_cols=158 Identities=12% Similarity=0.007 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
|+++||||||+|+||.+++++|++ .|++|+++.|++... . ....+++++.+|++|++++.+++.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQ-----QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 568999999999999999999999 899998887654321 0 012367899999999988766554
Q ss_pred ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047 93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.|+|+++...... ++....+++|+.++.++++++.... .+-.+++++||.. +
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~---------~--- 143 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH---------E--- 143 (256)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc---------c---
Confidence 3677888876432111 1345678999999999999877541 1124666665321 1
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
..+ ..+... |+. +.+++... ....+++++.++|+.+.++
T Consensus 144 --~~~------~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 144 --HTP------LPGASA--YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP 189 (256)
T ss_pred --cCC------CCCcch--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 011 111112 443 33332222 1356799999999999984
No 146
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.38 E-value=6.6e-12 Score=114.53 Aligned_cols=157 Identities=17% Similarity=0.102 Sum_probs=102.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~ 96 (396)
.+|+||||||+|.||++++++|.+ +|++|++++|+..... ..++.++++|++|++++.++++ .+|.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLE-----AGARVVTTARSRPDDL--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHH-----CCCEEEEEeCChhhhc--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 358999999999999999999998 8999999999764432 2467899999999987765443 4678
Q ss_pred eeEEEEeccCC--------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047 97 VTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT 166 (396)
Q Consensus 97 V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~ 166 (396)
|+|+|+..... .++....+++|+.++.++++++... .....+++++||...+ . +..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------~-------~~~ 146 (260)
T PRK06523 81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR-------L-------PLP 146 (260)
T ss_pred EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc-------C-------CCC
Confidence 99988743211 1145667899999998776665432 1123456666542211 1 100
Q ss_pred CCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 167 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 167 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ ....|+. +.+.+.... ...|+++.+++|+.|..+
T Consensus 147 ~-------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~ 188 (260)
T PRK06523 147 E-------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188 (260)
T ss_pred C-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence 0 1112543 323222221 345799999999999883
No 147
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2.4e-11 Score=109.66 Aligned_cols=116 Identities=16% Similarity=0.036 Sum_probs=84.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
++++||||||+|+||++++++|.+ +|++|+++.|+.... . ....++.++.+|++|++++.++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAA-----DGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE 78 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 458999999999999999999999 899988887754211 0 012467899999999998877776
Q ss_pred ----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 93 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
.+|.|+|+++..... .......+++|+.++.++++++.+....-.+++++|+
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 467899998753211 1134556889999999999888754222235666653
No 148
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.37 E-value=1.3e-11 Score=111.75 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=101.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC--CCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-------QL 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~ 94 (396)
|+|+||||+|+||.+++++|++ +|++|++++|++... .. ...++.++.+|+.|.+++.++++ ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998 899999999976421 00 12367889999999988876664 57
Q ss_pred CCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 95 TDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 95 ~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
|.|+|+++..... . ++....+++|+.|+.++++++.+. ..+..+++++||...+ .+.
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------~~~ 141 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS--------------WPY 141 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC--------------CCC
Confidence 8899988743211 1 134567899999976666655432 1124567776642111 000
Q ss_pred cCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 166 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.. ...|+. +.+..... ....++.+.+++|+.+.|.
T Consensus 142 ------~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 142 ------AG--GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred ------CC--CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 01 112443 33322221 1346799999999999873
No 149
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.37 E-value=6.6e-12 Score=113.35 Aligned_cols=155 Identities=15% Similarity=0.033 Sum_probs=102.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
|+|+||||+|+||.+++++|++ +|++|++++|++... .....+++++++|++|++++.++++.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAA-----AGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHh-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 6899999999999999999998 899999999976421 00124688999999999888776654
Q ss_pred CCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 94 LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
+|.|+|+++...... . +....+++|+.++.++++++... ..+..+++++||... .++ .
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~------~-- 142 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG------DRG------R-- 142 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc------cCC------C--
Confidence 467888876432211 1 23456899999999999887653 112456666653210 111 0
Q ss_pred cCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 166 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+ ....|+. +.+..... ....|+++.+++|+.+.+
T Consensus 143 -------~-~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t 183 (243)
T PRK07102 143 -------A-SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRT 183 (243)
T ss_pred -------C-CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence 0 0111443 22222221 146689999999999988
No 150
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.37 E-value=1e-11 Score=112.08 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=83.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
++++|||||+|+||.+++++|++ +|+.|++.+|+.... . ....+++++.+|+++.++++++++ .
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHA-----QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999998 799988888765321 0 011367889999999988776654 4
Q ss_pred CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++..... .++....+++|+.++.++++++.+. ..+..+++++||
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 139 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITS 139 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 67899998753211 1144667899999999988877532 112456777664
No 151
>PRK06398 aldose dehydrogenase; Validated
Probab=99.37 E-value=1.7e-11 Score=111.81 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=84.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~ 96 (396)
++|++|||||+|.||.+++++|.+ .|++|++++|+.... .+++++++|++|++++.++++ .+|.
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKE-----EGSNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 358999999999999999999999 899999999975432 368899999999988777665 4677
Q ss_pred eeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 97 VTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 97 V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
++|+|+..... . ++....+++|+.|+.++++++.+. ..+..+++++||
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 131 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS 131 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCc
Confidence 88887643211 1 134556899999999998877653 112456777664
No 152
>PRK08643 acetoin reductase; Validated
Probab=99.37 E-value=1e-11 Score=112.95 Aligned_cols=157 Identities=18% Similarity=0.091 Sum_probs=101.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
|+|++|||||+|+||.+++++|++ +|++|++++|+.... .. ...++.++++|+++++++.++++
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVE-----DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999998 899999999975321 00 12357789999999988776665
Q ss_pred ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047 93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+|.|+|+++...... +.....+++|+.++.++++++.+. ...-.+++++||... .++.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~--- 146 (256)
T PRK08643 76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG------VVGN--- 146 (256)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc------ccCC---
Confidence 4677899876432111 123567889999988777776543 111235666553221 1110
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+. ...|+. +.+...+. ....|++++.++|+.+..
T Consensus 147 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t 187 (256)
T PRK08643 147 ------------PE-LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKT 187 (256)
T ss_pred ------------CC-CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence 00 111443 22222221 135689999999998877
No 153
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.36 E-value=5.7e-12 Score=114.88 Aligned_cols=161 Identities=15% Similarity=0.110 Sum_probs=105.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
++++||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|++|+++++++++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGE-----AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999875321 0 012357789999999988866554
Q ss_pred ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047 93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+|.|+|+++...... +.....+++|+.++.++++++.+. ..+..+++++||...+ ++.
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~------~~~--- 156 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL------GGN--- 156 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc------cCC---
Confidence 3678999987532211 133556789999999999988653 1234577776643222 111
Q ss_pred CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
.+. . .+ ...|.. +.++..+.. ...++++.+++|+.+-.
T Consensus 157 --~~~---~--~~--~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t 201 (259)
T PRK08213 157 --PPE---V--MD--TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPT 201 (259)
T ss_pred --Ccc---c--cC--cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCC
Confidence 000 0 01 112553 333333221 34579999999988866
No 154
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.36 E-value=6.7e-12 Score=113.14 Aligned_cols=156 Identities=15% Similarity=0.107 Sum_probs=103.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
+|++|||||+|+||..++++|++ +|++|++++|++... . ....++.++.+|++|++++..+++.
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAK-----AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999 899999999975321 0 0124678899999999987776653
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+|.|+|+++...... ++....+++|+.++.++++++... ..+..+++++||...+ +..
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~~---- 149 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR-------NAF---- 149 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-------cCC----
Confidence 678999877432211 134566889999988888776443 1124567766643222 110
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
+ . ...|+. +.+..... ....+++++++||+.+-.
T Consensus 150 -~--------~--~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t 190 (241)
T PRK07454 150 -P--------Q--WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT 190 (241)
T ss_pred -C--------C--ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence 0 0 111443 22222211 134589999999998876
No 155
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4e-11 Score=108.53 Aligned_cols=115 Identities=18% Similarity=0.123 Sum_probs=84.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++||||||+|.||++++++|++ +|++|++++|++... . ....++.++.+|+.|++++.+++.
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAE-----AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999875421 0 012367899999999998877664
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... ......+.+|+.++.++++++.+.. .+..+++++||
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 4677999877532211 1335567899999999998876541 12346777664
No 156
>PRK07985 oxidoreductase; Provisional
Probab=99.36 E-value=1.6e-11 Score=114.10 Aligned_cols=157 Identities=12% Similarity=0.047 Sum_probs=102.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+|++|||||+|+||.+++++|++ +|++|+++.|+.... . ....++.++.+|++|++++.+++.
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~-----~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAR-----EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 47999999999999999999999 899999887653211 0 012356789999999987766554
Q ss_pred ----cCCCeeEEEEeccCC-------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047 93 ----QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
.+|.++|+|+..... .++....+++|+.|+.++++++...-..-.+++++||...| ..
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~-------~~---- 192 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY-------QP---- 192 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc-------cC----
Confidence 357788877642111 11456678999999999999887642122467766643322 11
Q ss_pred CCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
. +. ...|+..| +...... ...|+++.+++|+.|.++
T Consensus 193 -~---------~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~ 235 (294)
T PRK07985 193 -S---------PH-LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_pred -C---------CC-cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccc
Confidence 0 00 11155322 2222211 246899999999999984
No 157
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.35 E-value=1.1e-11 Score=116.23 Aligned_cols=172 Identities=13% Similarity=-0.001 Sum_probs=107.0
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHH
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKL 91 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~ 91 (396)
++.++|+++||||||.||.+++++|++ .|++|+++.|+.... . ....++.++.+|+.|.+++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~-----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~ 84 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAA-----AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG 84 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence 344568999999999999999999998 899999999975321 0 11236789999999998887665
Q ss_pred hc-------CCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccC
Q 016047 92 SQ-------LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 92 ~~-------~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
+. +|.++|+|+...... +.....+.+|+.|...+.+.+... ...-.+++++||..++.+. .
T Consensus 85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~------~ 158 (313)
T PRK05854 85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA------I 158 (313)
T ss_pred HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC------c
Confidence 43 677888877533211 245667899999977776665532 1112356666654333211 0
Q ss_pred CCCCCCccCCCCCCCCCCcchhHHHHHHHHh----h-----cCCCeeEEEEcCCceee
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV----E-----KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~----~-----~~~~~~~~ilRp~~v~G 207 (396)
....+.++.+..+ ...|+..|.....+ + ...++.+..+.|+.|-.
T Consensus 159 --~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 159 --NWDDLNWERSYAG--MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred --CcccccccccCcc--hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 0111222222212 22366543332211 1 13479999999998865
No 158
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1.9e-11 Score=111.39 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=106.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
+++||||||+|.||.+++++|++ +|++|++++|++.... ....++.++.+|+++++++..+++
T Consensus 7 ~~~ilItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAE-----EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 58999999999999999999999 8999999998764320 012467899999999998877775
Q ss_pred -cCCCeeEEEEeccCC-C----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 93 -QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 93 -~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
.+|.|+|+++..... . ++....+++|+.++.++.+++.+. .....+++++||...+ ++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------~~~-------- 147 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL------TGQ-------- 147 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc------cCC--------
Confidence 467899998742211 1 134567899999999998877653 1123467766542211 110
Q ss_pred cCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 166 TEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
.+ ...|+. +.+.+.... ...++++..++|+.|+++
T Consensus 148 ------~~--~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 148 ------GG--TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP 189 (258)
T ss_pred ------CC--CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence 01 112553 333333221 356899999999999993
No 159
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.34 E-value=2.2e-11 Score=109.26 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-HHHHHHHhcCCCeeEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF 101 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~~~V~h~a 101 (396)
.++|++|||||+|+||.+++++|++ +|++|++++|++.... ..++.++.+|++++ +.+.+.+..+|.|+|++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~a 75 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLA-----QGAQVYGVDKQDKPDL--SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTA 75 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHH-----CCCEEEEEeCCccccc--CCcEEEEECChHHHHHHHHHhhCCCCEEEECC
Confidence 3568999999999999999999998 8999999999764432 24678999999997 44555556678899987
Q ss_pred Eecc--CC-C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 102 YVTW--TN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 102 ~~~~--~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+... .. . ++....+++|+.++.++++++... ..+..+++++||
T Consensus 76 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 127 (235)
T PRK06550 76 GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS 127 (235)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 7421 11 1 134567899999999999987643 112346776664
No 160
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.34 E-value=1e-11 Score=114.13 Aligned_cols=115 Identities=17% Similarity=-0.020 Sum_probs=82.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------QL 94 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~~ 94 (396)
+++||||||||.||.+++++|++ +|++|++++|++.... ....+++++.+|++|++++.++++ .+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAA-----LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999998 8999999998753210 011247889999999988765554 35
Q ss_pred CCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 95 TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 95 ~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
|.++|+|+...... + .....+++|+.|+.++++++... ..+..+++.+||
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS 137 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVAS 137 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 67888877532211 1 34557899999988887766543 122457777764
No 161
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=3.1e-11 Score=109.39 Aligned_cols=208 Identities=13% Similarity=0.089 Sum_probs=121.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
++++|||||+|+||..+++.|++ +|++|++++|+.... . ....++.++++|+++++++.++++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQ-----KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57999999999999999999998 799999999875321 0 0124677899999999877665543
Q ss_pred ---CCCeeEEEEeccCC-----------C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccc
Q 016047 94 ---LTDVTHIFYVTWTN-----------R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPF 152 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~-----------~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~ 152 (396)
+|.|+|+++..... . +.....+++|+.++.++++++... ...-..++++|+..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~------ 153 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA------ 153 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc------
Confidence 57789987742210 0 133456789999998777655432 11123455554322
Q ss_pred cccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHH
Q 016047 153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA 225 (396)
Q Consensus 153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 225 (396)
.+|.. + ...|.. +.++..... ...+++++.++|+.+.++...... .... .
T Consensus 154 -~~~~~--------------~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~---~ 210 (253)
T PRK08217 154 -RAGNM--------------G--QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEAL---E 210 (253)
T ss_pred -ccCCC--------------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHHH---H
Confidence 22210 1 111443 333332221 246899999999999883211111 1110 0
Q ss_pred HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCC
Q 016047 226 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD 279 (396)
Q Consensus 226 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~ 279 (396)
... ...+.. .+ .+..+++..+.+++......|++|++.++.
T Consensus 211 ~~~-~~~~~~---------~~---~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 211 RLE-KMIPVG---------RL---GEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHH-hcCCcC---------CC---cCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 000 111211 11 233445777777775544568899987753
No 162
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1.2e-11 Score=111.69 Aligned_cols=155 Identities=18% Similarity=0.078 Sum_probs=100.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHhc----------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQ---------- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~---------- 93 (396)
++||||||||+||.+++++|++ +|++|++++|+...... ...++.++++|+.|.+++++++..
T Consensus 2 ~~vlItGasggiG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQ-----PGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHh-----CCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 4899999999999999999998 89999999997543211 123678899999999888774432
Q ss_pred -CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCCCC
Q 016047 94 -LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.|.++|+++...... +.....+++|+.|+..+++.+.+.. ....+++++||...+ ..
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~------ 143 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-------NA------ 143 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc-------CC------
Confidence 455888876532211 1345678999999777766655431 124567776643211 10
Q ss_pred CccCCCCCCCCCCcchhH-----HHHHHHHhh-cCCCeeEEEEcCCceee
Q 016047 164 PFTEDMPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~-~~~~~~~~ilRp~~v~G 207 (396)
..+ ...|+. +.++..+.. ...++++..++|+.+-.
T Consensus 144 -------~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 144 -------YAG--WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred -------CCC--chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 001 122554 333333321 23579999999987744
No 163
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.32 E-value=9.3e-12 Score=114.51 Aligned_cols=114 Identities=20% Similarity=0.133 Sum_probs=82.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh-------cCCCe
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTDV 97 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~V 97 (396)
|++|||||+|+||.+++++|++ +|++|++++|+..... ....+++++.+|+++.+++.++++ .+|.|
T Consensus 2 k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKA-----AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999999999998 8999999999753210 011357789999999988776654 46789
Q ss_pred eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047 98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG 144 (396)
Q Consensus 98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~ 144 (396)
+|+++...... ++....+++|+.|+.++++++... .....+++++||
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 130 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS 130 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 99987432211 134567899999999998887543 111245565543
No 164
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.32 E-value=2.2e-11 Score=108.71 Aligned_cols=159 Identities=20% Similarity=0.195 Sum_probs=108.4
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
.+.+++++||||||+-||..++++|.+ +||+|+.+.|+.+.. .. ..-.++++.+|+++++++.....
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~-----~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~ 76 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLAR-----RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLED 76 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence 345668999999999999999999999 899999999986431 11 11356799999999988766553
Q ss_pred -------cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047 93 -------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
.+|..+++|+..... .+...+.+++|+.++..|-.+.... ..+--+++-++|...|..
T Consensus 77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------- 149 (265)
T COG0300 77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------- 149 (265)
T ss_pred HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC-------
Confidence 367788887754322 1145678899999987776655543 112346676654332211
Q ss_pred CCCCCCCccCCCCCCCCCCcchh--------HHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYT--------LEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~--------~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
.|.... |+ ..+.|+... +..|+.++.+.|+.+.-
T Consensus 150 --------------~p~~av-Y~ATKa~v~~fSeaL~~EL-~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 150 --------------TPYMAV-YSATKAFVLSFSEALREEL-KGTGVKVTAVCPGPTRT 191 (265)
T ss_pred --------------CcchHH-HHHHHHHHHHHHHHHHHHh-cCCCeEEEEEecCcccc
Confidence 011111 43 255566555 78899999999887665
No 165
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.32 E-value=2.2e-11 Score=113.04 Aligned_cols=115 Identities=18% Similarity=0.137 Sum_probs=83.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++||||||+|+||.+++++|++ +|++|++++|+.... . .....+.++.+|++|++++.++++
T Consensus 40 ~k~vlItGasggIG~~la~~La~-----~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFAR-----RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 48999999999999999999998 899999999975321 0 011356789999999998877776
Q ss_pred --cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+|+...... ......+++|+.|+.++++++... .....+++++||
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 178 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT 178 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 5788999877532211 122456899999988888766432 112456776664
No 166
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.7e-11 Score=112.03 Aligned_cols=155 Identities=15% Similarity=0.094 Sum_probs=102.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
++||||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|++|++.+..++.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~-----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLAR-----AGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999998 899999999975321 0 012467889999999998877665
Q ss_pred -cCCCeeEEEEeccCCC-----c--cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCC
Q 016047 93 -QLTDVTHIFYVTWTNR-----S--TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 93 -~~~~V~h~a~~~~~~~-----~--~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
..|.|+|+++...... + ...+.+++|+.++.++++++... ..+..+++++||...| ..
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~-------~~------ 143 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL-------TG------ 143 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccccc-------CC------
Confidence 4678999977432211 1 23456899999999999988643 1123456655532211 11
Q ss_pred CccCCCCCCCCCCcchhHH-----HHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 164 PFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
..+... |+.. .+..... ....++++.+++|+.+..
T Consensus 144 -------~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t 185 (263)
T PRK06181 144 -------VPTRSG--YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT 185 (263)
T ss_pred -------CCCccH--HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCcccc
Confidence 001112 5532 2222211 134689999999998877
No 167
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.32 E-value=2.7e-11 Score=110.85 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~ 96 (396)
.+|++|||||+|+||.+++++|++ +|++|++++|+.... ...++.++.+|++|++++.++++. +|.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 80 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLA-----NGANVVNADIHGGDG--QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG 80 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcccc--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 358999999999999999999999 899999999876542 124678899999999888776653 577
Q ss_pred eeEEEEeccCC---------------CccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047 97 VTHIFYVTWTN---------------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 144 (396)
Q Consensus 97 V~h~a~~~~~~---------------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 144 (396)
|+|+|+..... .++....+++|+.++.++++++.+.- .+..+++++||
T Consensus 81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 145 (266)
T PRK06171 81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS 145 (266)
T ss_pred EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 99988743210 01335578999999999999887541 12345776664
No 168
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.32 E-value=2.2e-11 Score=111.80 Aligned_cols=155 Identities=15% Similarity=0.072 Sum_probs=100.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
|+||||||+|+||.+++++|++ +|++|++++|+.... . ....++.++.+|++|++++.+++.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAR-----EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW 75 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999 899999999875321 0 112467889999999988777665
Q ss_pred -cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047 93 -QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 93 -~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
.+|.|+|+++...... + +....+++|+.++.++.+++... ..+..+++++||...+ .
T Consensus 76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-------~------- 141 (270)
T PRK05650 76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL-------M------- 141 (270)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc-------C-------
Confidence 4677888877533211 1 23446789988887766654322 1124567766643211 1
Q ss_pred CccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047 164 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
+. + ....|+..|. +.... ...|+++++++|+.+..+
T Consensus 142 ~~-------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 142 QG-------P-AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPSFFQTN 185 (270)
T ss_pred CC-------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCccccC
Confidence 00 0 0112553222 22222 346899999999999874
No 169
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.32 E-value=2.2e-11 Score=110.53 Aligned_cols=115 Identities=17% Similarity=0.081 Sum_probs=86.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~ 96 (396)
++|++|||||+|.||.+++++|++ +|++|++++|+..... ...+++++++|+.+++++.+++.. +|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~-----~g~~v~~~~r~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLA-----AGATVVVCGRRAPETV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCChhhhh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999998 8999999999764311 224678999999999888777654 478
Q ss_pred eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
|+|+|+...... ......+++|+.++.++++++.+. .....+++++||
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 135 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS 135 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999887432111 134567899999999999987653 112346776664
No 170
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.3e-11 Score=112.26 Aligned_cols=157 Identities=14% Similarity=0.089 Sum_probs=100.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhc-------CC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ-------LT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~ 95 (396)
+++||||||+|+||.+++++|++ +|++|++++|+.... ........++++|++|++++.++++. +|
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAA-----EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999998 899999999975421 00011236889999999988777763 57
Q ss_pred CeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 96 DVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 96 ~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
.|+|+++...... ......+++|+.|+.++++++... ..+..+++++||. ...+|..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~------~~~~g~~------- 148 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASF------VAVMGSA------- 148 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcch------hhccCCC-------
Confidence 7889876432111 124567899999998887766532 1123456655531 1122210
Q ss_pred cCCCCCCCCCCcchhHHH-----HHHH---HhhcCCCeeEEEEcCCceeec
Q 016047 166 TEDMPRLDAPNFYYTLED-----ILFE---EVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~e~-----~l~~---~~~~~~~~~~~ilRp~~v~G~ 208 (396)
.....|+..| +... .+ ...+++++++||+.+.++
T Consensus 149 --------~~~~~Y~~sKaal~~~~~~l~~~~-~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 149 --------TSQISYTASKGGVLAMSRELGVQF-ARQGIRVNALCPGPVNTP 190 (255)
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHH-HhhCcEEEEEeeCCcCCc
Confidence 0011254322 2221 22 345899999999999873
No 171
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.31 E-value=8.8e-12 Score=112.07 Aligned_cols=158 Identities=15% Similarity=0.065 Sum_probs=100.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~----- 93 (396)
+++||||||+|+||.++++.|++ .|++|++++|++... .....+++++.+|+++++++.++++.
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALK-----EGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 57999999999999999999998 899999999976421 11113678999999999887765544
Q ss_pred --CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047 94 --LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE 167 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E 167 (396)
+|.++|+++...... +.....+++|+.+..++++.+.+.-.+-.+++++|+.. +.++. .
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~------~~~~~-------~-- 144 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS------GIYKA-------S-- 144 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch------hcccC-------C--
Confidence 466777765322111 12345578999998888877665411123455554311 01110 0
Q ss_pred CCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 168 DMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 168 ~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
+ +.. .|.. +.+++.... ...+++++++||+.++++
T Consensus 145 --~--~~~--~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~ 186 (238)
T PRK05786 145 --P--DQL--SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGD 186 (238)
T ss_pred --C--Cch--HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence 0 111 1443 323322221 345899999999999983
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.5e-11 Score=108.24 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=77.7
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh-----cCCCee
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVT 98 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V~ 98 (396)
++|+||||+|+||++++++|.+ .|++|++++|++... .....++.++.+|++|+++++++++ .+|.|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLE-----RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHh-----CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 6899999999999999999999 899999999986532 1112357788999999988777665 367799
Q ss_pred EEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 99 HIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 99 h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
|+++...... .+....+.+|+.++.++++++...
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 118 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ 118 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh
Confidence 9887532111 134456788999999998887654
No 173
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.6e-11 Score=111.40 Aligned_cols=157 Identities=13% Similarity=0.093 Sum_probs=102.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C--CCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W--NADHLVEYVQCDVSDPEETQAKLSQ----- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~--~~~~~v~~~~~Dl~d~~~~~~~~~~----- 93 (396)
++|+||||||+|+||+++++.|++ .|++|+++.++.... . ....++.++++|+.|++++.++++.
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAR-----EGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 357999999999999999999998 899998776543211 0 0113678899999999888776654
Q ss_pred ---CCCeeEEEEeccC--------CC----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccc
Q 016047 94 ---LTDVTHIFYVTWT--------NR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG 156 (396)
Q Consensus 94 ---~~~V~h~a~~~~~--------~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g 156 (396)
+|.++|+|+.... .. .+....+++|+.++.++++++... ..+..++++++|.. +
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~---------~ 149 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL---------F 149 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc---------c
Confidence 6779998764211 00 123557899999999999988643 11234566555311 1
Q ss_pred cCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 157 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 157 ~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
..+ ..+... |+. +.+++.... ...++.+..++|+.+-.
T Consensus 150 -----~~~------~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 150 -----QNP------VVPYHD--YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred -----cCC------CCCccc--hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence 001 111112 543 444444321 34679999999998865
No 174
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.30 E-value=1.9e-11 Score=110.58 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
|.|+||||||+|+||..+++.|++ +|++|+++.++.... . ....++.++.+|+.|++++.++++
T Consensus 1 m~k~ilItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAA-----RGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQ 75 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 568999999999999999999998 899988766443211 0 012367899999999988766554
Q ss_pred ----cCCCeeEEEEeccCCC---c----cHHHHHHhHHHHHHHHHHHHcc
Q 016047 93 ----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
.+|.|+|+++...... + +....+.+|+.++.++++++.+
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4677889887432211 1 2355689999999888764443
No 175
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.30 E-value=2.7e-11 Score=109.64 Aligned_cols=158 Identities=13% Similarity=0.065 Sum_probs=104.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----CCCCCeeEEEecCCChHHHHHHHh------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----NADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
++|+||||||+|+||.+++++|++ +|++|++++|+..... ....++.++.+|+++++++..+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAE-----AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999 8999999998652110 012357899999999988876554
Q ss_pred -cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEeccceeecccccccccCCCCC
Q 016047 93 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.++|+++...... ......+++|+.++.++++++.+. ... ..+++++||...| +.
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~----- 146 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------QG----- 146 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------cC-----
Confidence 3677888877532111 134566899999999999987643 111 3466766643322 11
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
.+ ..+. |.. +.+.+.... ...|+++.+++|+.|..+
T Consensus 147 ~~--------~~~~--Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 147 GI--------RVPS--YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred CC--------CCch--hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence 00 0011 432 333322221 345899999999998773
No 176
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.30 E-value=6.8e-11 Score=107.43 Aligned_cols=154 Identities=17% Similarity=0.169 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC-------CC--CCCCeeEEEecCCChHHHHHHHh-
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEETQAKLS- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~~~~~~~- 92 (396)
.+++||||||+|.||.+++++|++ + |++|++++|++... .. ...+++++.+|++|.+++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~-----~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLK-----NAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDA 81 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHh-----cCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHH
Confidence 357899999999999999999998 5 58999999986531 11 11368899999999987654443
Q ss_pred -----cCCCeeEEEEeccCCCc---cH---HHHHHhHHHHHHHH----HHHHcccCCCcceEEEeccceeeccccccccc
Q 016047 93 -----QLTDVTHIFYVTWTNRS---TE---AENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~~---~~---~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
.+|.++|+++....... ++ .+.+++|+.++.++ ++.+++.+ ..+++++||.. |.
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~---------g~ 150 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVA---------GE 150 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechh---------hc
Confidence 46767777764322111 11 24589999988764 55555432 45777766432 11
Q ss_pred CCCCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceee
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
. + .+ . ...|+..| .+.... +..++++++++|+.+..
T Consensus 151 ~-----~----~~--~--~~~Y~~sKaa~~~~~~~l~~el-~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 151 R-----V----RR--S--NFVYGSTKAGLDGFYLGLGEAL-REYGVRVLVVRPGQVRT 194 (253)
T ss_pred C-----C----CC--C--CcchHHHHHHHHHHHHHHHHHH-hhcCCEEEEEeeCceec
Confidence 0 0 00 1 11144322 233333 56789999999998876
No 177
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.30 E-value=2.7e-11 Score=107.79 Aligned_cols=163 Identities=16% Similarity=0.083 Sum_probs=102.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHh-----cCCCeeE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVTH 99 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V~h 99 (396)
++++||||+|+||++++++|++ .|++|++++|++... .....+++++.+|+++.+++.+++. .+|.|+|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRA-----DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHh-----CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 5899999999999999999998 899999999975431 0111356789999999988877543 2567888
Q ss_pred EEEeccCC--------CccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047 100 IFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170 (396)
Q Consensus 100 ~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p 170 (396)
+++..... .++....+++|+.++.++++++.+.- ..-.++++++|.. +.++. .+.. +
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~------~~~~~-----~~~~---~ 142 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM------GSIGD-----ATGT---T 142 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc------ccccc-----ccCC---C
Confidence 87653111 11456688999999999999887531 1123455554321 12221 0000 0
Q ss_pred CCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 171 RLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 171 ~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
..+......+.+.++.....+..++++..++|+.+.-
T Consensus 143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t 179 (222)
T PRK06953 143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRT 179 (222)
T ss_pred ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeec
Confidence 0011111122344444443233468999999998876
No 178
>PRK08017 oxidoreductase; Provisional
Probab=99.29 E-value=3.3e-11 Score=109.54 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--------C
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--------~ 94 (396)
|.++||||||+|+||.++++.|++ +|++|++++|++... .....+++.+.+|+.|.+++.+++.. +
T Consensus 1 m~k~vlVtGasg~IG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 1 MQKSVLITGCSSGIGLEAALELKR-----RGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 457899999999999999999998 899999999976432 11123578899999999877665543 3
Q ss_pred CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHH----HHHHcccCCCcceEEEecc
Q 016047 95 TDVTHIFYVTWTNR------STEAENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~ 144 (396)
+.++|+++...... +.....+++|+.|+.++ ++++++.+ ..+++++||
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~~ss 133 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--EGRIVMTSS 133 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CCEEEEEcC
Confidence 45777765322111 13456789999998776 45554432 456776654
No 179
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.28 E-value=1.7e-10 Score=103.86 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=79.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
|.+|||||+|+||.+++++|++ .|++|+++.|+.... + ....++.++.+|+.|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAK-----DGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE 75 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999998 899999998842211 0 012367899999999988766554
Q ss_pred --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++..... .++....+.+|+.++..+++++... ..+..+++++||
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss 137 (242)
T TIGR01829 76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS 137 (242)
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 367788887643211 1134566789999987766554432 112456776664
No 180
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.28 E-value=5.4e-11 Score=108.31 Aligned_cols=104 Identities=20% Similarity=0.115 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
..+++||||||+|+||++++++|.+ .|++|++++|++... . ....+++++.+|+++++++.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQ-----AGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4468999999999999999999998 899999999975321 0 012367899999999988877765
Q ss_pred ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047 93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
.+|.|+|+++...... .+....+++|+.++.++++++..
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T PRK06949 82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK 130 (258)
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence 3678999887432211 13556789999999999887753
No 181
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.28 E-value=5.2e-11 Score=108.60 Aligned_cols=115 Identities=17% Similarity=0.085 Sum_probs=84.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+|+||||||+|.||.+++++|++ +|++|++++|+.... .. ...++.++.+|++|++++.++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAR-----EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 58999999999999999999999 899999999975321 10 12357789999999988877665
Q ss_pred ----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.++|+|+..... .++....+++|+.++.++++++... ..+..+++++||
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 145 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS 145 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence 467789988743211 1134567899999999888877643 112346776654
No 182
>PRK09242 tropinone reductase; Provisional
Probab=99.28 E-value=2e-10 Score=104.63 Aligned_cols=158 Identities=16% Similarity=-0.002 Sum_probs=103.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
.+|++|||||+|.||++++++|.+ +|++|++++|+.... .....++.++.+|+++++++.+++.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLG-----LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 358999999999999999999998 899999999975321 0012467889999999987766554
Q ss_pred -----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047 93 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.|+|+++..... .++....+++|+.++.++++++... ..+..+++++||...+ ..
T Consensus 83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~-------~~-- 153 (257)
T PRK09242 83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL-------TH-- 153 (257)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------CC--
Confidence 356788887642111 1145567899999999998887543 1123567766642211 10
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
. ..... |+. +.++.... ....++++..++|+.+..+
T Consensus 154 -----~------~~~~~--Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~ 196 (257)
T PRK09242 154 -----V------RSGAP--YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP 196 (257)
T ss_pred -----C------CCCcc--hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCc
Confidence 0 01111 432 33332221 1346899999999999884
No 183
>PRK12742 oxidoreductase; Provisional
Probab=99.28 E-value=4.5e-11 Score=107.37 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=100.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhc---CCCe
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTDV 97 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V 97 (396)
++|+||||||+|.||++++++|++ +|++|+++.|+.... .....+++++.+|++|.+.+.+.+.. +|.+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVT-----DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence 358999999999999999999998 899998877643211 10112467889999999888776654 5678
Q ss_pred eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047 98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR 171 (396)
Q Consensus 98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~ 171 (396)
+|+++...... ++....+++|+.++.+++.++.+.-..-.+++++||. .+. ..+ .
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~---------~~~----~~~------~ 140 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV---------NGD----RMP------V 140 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc---------ccc----cCC------C
Confidence 88876432211 1346678999999998876665542123456655531 110 011 1
Q ss_pred CCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 172 LDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 172 ~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
.+... |+. +.+...... ...++++.+++|+.+..
T Consensus 141 ~~~~~--Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t 181 (237)
T PRK12742 141 AGMAA--YAASKSALQGMARGLARDFGPRGITINVVQPGPIDT 181 (237)
T ss_pred CCCcc--hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccC
Confidence 01111 442 443333221 34679999999998876
No 184
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.27 E-value=1.3e-10 Score=100.99 Aligned_cols=155 Identities=20% Similarity=0.150 Sum_probs=104.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHH-------h
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKL-------S 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~-------~ 92 (396)
+|.++|||||+-||.+++++|.+ .|++|++..|+.+.. ......+..+..|++|.+++.+++ .
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~-----~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAE-----AGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHH-----CCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 47899999999999999999999 899999999987531 111135788999999998755544 3
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
.+|.++|.|+..-... +++..++++|+.|+.+...++... ..+-.+++-+||+. |. .+
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA---------G~-----~~ 146 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA---------GR-----YP 146 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc---------cc-----cc
Confidence 4677888777543311 156788999999998888877654 12234666655432 11 00
Q ss_pred ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
.|...- |.. .+-|+..+ ...+++++.+-|+.|-.
T Consensus 147 -------y~~~~v-Y~ATK~aV~~fs~~LR~e~-~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 147 -------YPGGAV-YGATKAAVRAFSLGLRQEL-AGTGIRVTVISPGLVET 188 (246)
T ss_pred -------CCCCcc-chhhHHHHHHHHHHHHHHh-cCCCeeEEEecCceecc
Confidence 011111 432 33444433 45789999999998855
No 185
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.27 E-value=4.7e-11 Score=108.59 Aligned_cols=115 Identities=17% Similarity=0.099 Sum_probs=79.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHh-------cCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT 95 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~ 95 (396)
+|++|||||+|.||.+++++|.+ .|++|+++.|+..... ....++.++.+|++|++++.++++ .+|
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLR-----EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD 81 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999 8999998877643210 011257889999999998877665 467
Q ss_pred CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.|+|+++...... ++....+++|+.++..+..++.+. ..+..+++++||
T Consensus 82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS 138 (255)
T PRK06463 82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS 138 (255)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 7999887532111 134567899999965554443322 112356776664
No 186
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.27 E-value=1.1e-10 Score=107.45 Aligned_cols=104 Identities=15% Similarity=0.039 Sum_probs=79.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCeeEEEecCCChHHHHH
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------------NADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~~~~v~~~~~Dl~d~~~~~~ 89 (396)
+++++|||||+|+||.+++++|++ +|++|++++|+..... ....++.++.+|+++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~ 79 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAAR-----DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA 79 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 357999999999999999999998 8999999999754210 011357789999999998877
Q ss_pred HHh-------cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047 90 KLS-------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 90 ~~~-------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
++. .+|.|+|+|+...... + +....+++|+.++.++++++...
T Consensus 80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 665 4677999887532211 1 34557889999999999988754
No 187
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.27 E-value=4.3e-11 Score=108.76 Aligned_cols=116 Identities=17% Similarity=0.107 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
.+++||||||+|+||.+++++|++ +|++|++++|+.... ......+..+.+|+++++++.+++.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAA-----KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 458999999999999999999998 899999999975321 0112356789999999988877665
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... .+....+++|+.|+.++++++... .....+++++||
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 4578999887532211 133457899999999999988753 112456776664
No 188
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.26 E-value=1.2e-10 Score=105.91 Aligned_cols=116 Identities=16% Similarity=0.051 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
.+|+||||||+|+||++++++|++ .|++|++++|++... . ....++.++.+|++|++++..+++.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAG-----AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999975321 0 0123578999999999888776654
Q ss_pred ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ++....+.+|+.++.++.+++.+. .....+++++|+
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss 147 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITS 147 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEee
Confidence 466888876432110 134567899999999998777543 112456666654
No 189
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.7e-11 Score=109.09 Aligned_cols=116 Identities=20% Similarity=0.212 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
.++++|||||+|+||++++++|++ +|++|++++|+.... . ....++.++.+|+++++++++++..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFAR-----HGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999875311 0 0123577899999999888776653
Q ss_pred ---CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ---LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... . ...+.+++|+.++.++++++.+. .....+++++||
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 141 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS 141 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 577889887532211 1 23456899999999999887653 112345665553
No 190
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.3e-10 Score=105.72 Aligned_cols=104 Identities=13% Similarity=0.030 Sum_probs=77.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
++|++|||||+|+||.+++++|++ +|++|+++.+++.... ....+++++++|+++++++.+++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~-----~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 81 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAA-----QGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD 81 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHH-----CCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence 358999999999999999999998 8999887776542110 012367889999999998877665
Q ss_pred -------cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 -------QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
.+|.++|+|+..... . +.....+++|+.++..+++++.+.
T Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 367788888753211 1 134567899999999999988754
No 191
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.25 E-value=5.6e-11 Score=108.67 Aligned_cols=116 Identities=20% Similarity=0.122 Sum_probs=85.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
.++++|||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|+++++++.+++.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAE-----AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999975321 0 012367889999999998876655
Q ss_pred ---cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 93 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
.+|.|+|+|+..... . ++....+.+|+.++.++++++... .....+++++||
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS 147 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS 147 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 467899987642211 1 145667899999999999998753 112356666653
No 192
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.25 E-value=9.2e-11 Score=106.59 Aligned_cols=116 Identities=18% Similarity=0.038 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+++++|||||+|.||.+++++|.+ .|++|++++|++... . ....++.++.+|+++++++.++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAR-----EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999999975421 0 012357789999999988777665
Q ss_pred ---cCCCeeEEEEeccC--C--C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ---QLTDVTHIFYVTWT--N--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~--~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.++|+|+.... . . ++....+++|+.++.++.+++... ..+..+++++||
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS 143 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTST 143 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 46778888764321 1 0 134567899998877776654432 112345666654
No 193
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.25 E-value=8.9e-11 Score=107.21 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=83.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHhc-------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ------- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~~------- 93 (396)
++++|||||+|.||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+++.++++.
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVA-----AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999 899999999975421 0 0123578999999999888776653
Q ss_pred CCCeeEEEEeccCC---C--ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047 94 LTDVTHIFYVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 144 (396)
Q Consensus 94 ~~~V~h~a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 144 (396)
+|.++|+|+..... . .+....+++|+.++.++++++...- .+-.+++++||
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 57788887642111 1 1445678999999999988776531 12245666653
No 194
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.25 E-value=8.2e-11 Score=107.20 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.+|+||||||+|+||.+++++|++ .|++|+++.|+.... . ....++.++.+|+++.+++..+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAK-----AGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999873210 0 012467899999999988877665
Q ss_pred --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
.+|.++|+++..... ..+....+++|+.++.++++++.+. ..+..+++++|+...+.+
T Consensus 89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 156 (258)
T PRK06935 89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------ 156 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------
Confidence 467788887743211 1134567899999988887766543 112356776664322210
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
.+ ..+. |+. +.+...+.. ...|+++.+++|+.|..
T Consensus 157 ~~--------~~~~--Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t 198 (258)
T PRK06935 157 GK--------FVPA--YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKT 198 (258)
T ss_pred CC--------Cchh--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccc
Confidence 00 0011 442 333332221 34579999999998876
No 195
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.25 E-value=7.2e-11 Score=107.91 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=83.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------ 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (396)
+++||||||+|+||.+++++|++ +|++|++++|++... .....++.++.+|++|++++.++++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAA-----AGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 57899999999999999999999 899999999975321 1112468899999999987766554
Q ss_pred cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047 93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT 143 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s 143 (396)
.+|.|+|+|+...... ......+++|+.|+.++++++.+. ..+..++++++
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~is 138 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVG 138 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 4677999877532211 134567789999999999988653 11234566554
No 196
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.24 E-value=7.3e-11 Score=107.18 Aligned_cols=115 Identities=19% Similarity=0.120 Sum_probs=82.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
+++||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|++|.+++.++++.
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAR-----EGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999998 899999999975321 0 0123678999999999888776654
Q ss_pred ---CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ++....+++|+.++.++++++... ..+..+++++||
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS 144 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS 144 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 477889887532111 134567889999998776654432 112346666654
No 197
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.24 E-value=5.9e-11 Score=107.73 Aligned_cols=115 Identities=16% Similarity=0.039 Sum_probs=83.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+|++|||||+|.||.+++++|++ .|++|++++|+.... .. ...++.++++|++|++++.+++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAE-----EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999998 899999999975321 00 12467899999999988876554
Q ss_pred --cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--C-CCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--A-PNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~-~~~~~~~~~s~ 144 (396)
.+|.|+|+++...... + .....+++|+.++.++++++.+. . ....+++++||
T Consensus 76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 138 (252)
T PRK07677 76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA 138 (252)
T ss_pred hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 3577888876422111 1 34567899999999999988543 1 11246676654
No 198
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.24 E-value=7.1e-11 Score=108.02 Aligned_cols=117 Identities=16% Similarity=0.028 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
.++++||||||+|+||.+++++|++ .|++|++++|++... . ....++.++.+|++|++++.++++.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFAR-----AGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3458999999999999999999998 899999999975321 0 0113567889999999888776654
Q ss_pred -----CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047 94 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG 144 (396)
Q Consensus 94 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~ 144 (396)
+|.|+|+++..... .++....+++|+.|+.++++++... ..+-.+++++|+
T Consensus 82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss 144 (264)
T PRK07576 82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISA 144 (264)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 57788887532111 1134556789999999999987653 111135665553
No 199
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.23 E-value=8.8e-11 Score=106.87 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------------C-CCCCCeeEEEecCCC
Q 016047 24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------W-NADHLVEYVQCDVSD 83 (396)
Q Consensus 24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------------~-~~~~~v~~~~~Dl~d 83 (396)
++++|||||||| .||.+++++|++ .|++|++++|++.+. . ....+++++.+|+++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 78 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAA-----KGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ 78 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHH-----cCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence 458999999996 699999999998 899999999873210 0 001357899999999
Q ss_pred hHHHHHHHhc-------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecc
Q 016047 84 PEETQAKLSQ-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG 144 (396)
Q Consensus 84 ~~~~~~~~~~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~ 144 (396)
.+++..+++. +|.|+|+|+...... .+....+++|+.++.++++++... . ....+++++|+
T Consensus 79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss 154 (256)
T PRK12748 79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS 154 (256)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC
Confidence 9887665543 567888876422111 134556899999999999988653 1 12346776664
No 200
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.23 E-value=8.6e-11 Score=106.77 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=104.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
+|++|||||+|+||.+++++|++ +|++|++++|+.... .. ...++..+.+|++|++++.+++..
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~-----~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAE-----YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 57999999999999999999999 899999999875321 00 123567889999999888776643
Q ss_pred ---CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 94 ---LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+|.|+|+++..... .++....+++|+.++.++++++.+. ..+..+++++||... .++.
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~----- 152 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS------ELGR----- 152 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh------ccCC-----
Confidence 67799988743211 1134567899999998888877654 122456776654211 1110
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
..... |.. +.+...... ...|+++..++|+.+..+
T Consensus 153 ---------~~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~ 194 (254)
T PRK08085 153 ---------DTITP--YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTE 194 (254)
T ss_pred ---------CCCcc--hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCc
Confidence 01111 432 333333221 345899999999999884
No 201
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.9e-10 Score=103.51 Aligned_cols=114 Identities=17% Similarity=0.104 Sum_probs=77.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCCh--HHHHHH----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP--EETQAK---- 90 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~--~~~~~~---- 90 (396)
+++|+||||+|+||.+++++|++ +|++|++++|++... ......+.++.+|+.+. +++..+
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAA-----AGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 47999999999999999999998 899999999986421 00113466788999753 333332
Q ss_pred ---H-hcCCCeeEEEEeccCC---Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047 91 ---L-SQLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT 143 (396)
Q Consensus 91 ---~-~~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s 143 (396)
+ ..+|.|+|+|+..... .+ +....+++|+.|+.++++++.+. ...-.++++++
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 146 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVG 146 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2 3467899998853211 11 34456899999999998887654 11123555554
No 202
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.3e-10 Score=105.67 Aligned_cols=159 Identities=13% Similarity=-0.020 Sum_probs=102.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
+|++|||||+|.||.+++++|.+ .|++|++++|+.... .. ...++.++.+|++|++++.+++..
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQ-----AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999 899999999875321 00 123577899999999888776654
Q ss_pred ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047 94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+|.++|+|+...... ++....+++|+.++..+++++... ..+..+++++||... ..+.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~---- 152 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG------IIVN---- 152 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh------cCCC----
Confidence 477888877532211 134567899999998777765432 112345666653221 1110
Q ss_pred CCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
..+ + ...|+..| +.+... ....|+++.+++|+.+..+
T Consensus 153 ~~~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 153 RGL--------L--QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred CCC--------C--cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence 000 0 11255322 222221 1356899999999998773
No 203
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.6e-10 Score=109.29 Aligned_cols=116 Identities=18% Similarity=0.064 Sum_probs=80.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++|+||||+|.||.+++++|.+ +|++|++++|+.... . ....++.++.+|++|+++++++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~-----~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFAR-----RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999 899999999975321 0 012357789999999998877654
Q ss_pred --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccc
Q 016047 93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT 145 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~ 145 (396)
.+|.++|+++...... +.....+++|+.|+.++..++.+. ..+..+++++||.
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~ 145 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA 145 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence 4677888877432111 133556788888776655554433 1123567766643
No 204
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.1e-10 Score=105.97 Aligned_cols=117 Identities=13% Similarity=0.083 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.++++||||||+|+||.+++++|.+ .|++|++++|+.... . .....+.++++|+.+.+++.++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQ-----QGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3458999999999999999999999 899999999975321 0 011356789999999987766554
Q ss_pred ----cCCCeeEEEEeccC--C--Cc---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ----QLTDVTHIFYVTWT--N--RS---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~--~--~~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++.... . .. .....+++|+.++.++++++.+. ..+..+++++||
T Consensus 81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 36778888763211 1 11 34567899999998888777543 122456666653
No 205
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.9e-10 Score=104.90 Aligned_cols=158 Identities=13% Similarity=0.052 Sum_probs=103.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
++|+|+||||+|+||++++++|.+ +|++ |++++|++... . .....+.++.+|+++++++.+++.
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAE-----RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHH-----CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 458999999999999999999998 7888 99999875321 0 012357789999999988777665
Q ss_pred ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047 93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
++|.|+|+++...... ......+++|+.++.++++++.+.. ....+++++||...| +.
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~-------~~-- 150 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH-------GG-- 150 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-------cC--
Confidence 4678999987532111 1235568999999999988876531 112456666543222 11
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
.+ .... |+. +.+..... ....+++++.++|+.+.++
T Consensus 151 ---~~--------~~~~--Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~ 193 (260)
T PRK06198 151 ---QP--------FLAA--YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATE 193 (260)
T ss_pred ---CC--------Ccch--hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCc
Confidence 00 0011 443 32222211 1345799999999999884
No 206
>PRK07069 short chain dehydrogenase; Validated
Probab=99.21 E-value=2.5e-10 Score=103.36 Aligned_cols=112 Identities=18% Similarity=0.092 Sum_probs=79.1
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC---CCCCeeEEEecCCChHHHHHHHh----
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN---ADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~---~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+||||||+|+||.++++.|++ +|++|++++|++... .. ....+..+.+|++|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAE-----QGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD 75 (251)
T ss_pred CEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH
Confidence 489999999999999999998 899999999873211 00 01124468899999998766654
Q ss_pred ---cCCCeeEEEEeccCCC--c----cHHHHHHhHHH----HHHHHHHHHcccCCCcceEEEeccc
Q 016047 93 ---QLTDVTHIFYVTWTNR--S----TEAENCKINGS----MFRNVLRAVIPNAPNLRHVCLQTGT 145 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~----gt~~ll~a~~~~~~~~~~~~~~s~~ 145 (396)
.+|.|+|+++...... + +....+++|+. +++++++++++.+ ..+++++||.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~ 139 (251)
T PRK07069 76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSV 139 (251)
T ss_pred HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecCh
Confidence 4577999977533211 1 23456788888 7788888877643 4677777643
No 207
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.3e-10 Score=120.14 Aligned_cols=159 Identities=11% Similarity=0.073 Sum_probs=105.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
...+|++|||||+|+||.+++++|++ +|++|++++|++... . ....++.++.+|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAE-----AGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 33468999999999999999999998 899999999975421 0 012367889999999998877766
Q ss_pred -----cCCCeeEEEEeccCC--------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047 93 -----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
.+|.++|+|+..... .++....+++|+.|+.++++++... .....+++++||...| +.
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------~~ 515 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQ-------TN 515 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhc-------CC
Confidence 467899988743211 0134567899999998887766433 1124577777653322 11
Q ss_pred CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G 207 (396)
. +. ...|+. +.+...+. ....++.+++++|+.|..
T Consensus 516 -----~---------~~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T 557 (657)
T PRK07201 516 -----A---------PR-FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRT 557 (657)
T ss_pred -----C---------CC-cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcc
Confidence 0 00 111553 22222211 134689999999999876
No 208
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.20 E-value=1.7e-10 Score=104.99 Aligned_cols=116 Identities=13% Similarity=0.042 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
.+|+||||||+|+||.+++++|.+ +|++|++++|+.... . ....++.++.+|++|.+++.+++..
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~-----~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999 899999999864321 0 0113577889999999987766543
Q ss_pred ----CCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ----LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.|.|+|+++...... +.....+++|+.++.++++++... .....+++++||
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 577889887532211 134556899999999999988643 111235666653
No 209
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.20 E-value=1.5e-10 Score=105.14 Aligned_cols=115 Identities=16% Similarity=0.135 Sum_probs=82.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C-CCCCCeeEEEecCCChHHHHHHHhc------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLSQ------ 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~~------ 93 (396)
+|++|||||+|.||.+++++|++ +|++|++++|+.... . ....++.++.+|++|++++.++++.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAK-----AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999 899999998864221 0 0123578899999999988776653
Q ss_pred -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
+|.++|+|+...... ++....+++|+.++..+.+++.+. ...-.+++++||
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS 143 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS 143 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 577888876432211 145667899999998888877643 111246676664
No 210
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.20 E-value=2.6e-10 Score=103.47 Aligned_cols=157 Identities=10% Similarity=0.019 Sum_probs=99.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+|++|||||+|+||.+++++|.+ .|++|+++.++. ... . .....+..+.+|+.+.+++...++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 899998875432 210 0 011346678999999876543332
Q ss_pred ---------cCCCeeEEEEeccCC--Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047 93 ---------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK 157 (396)
Q Consensus 93 ---------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~ 157 (396)
.+|.++|+|+..... .+ .....+++|+.++..+++++.+.-.+-.+++++||...+ .
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-------~- 150 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-------I- 150 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-------c-
Confidence 467788988753211 11 235677899999999998776642222467766643211 1
Q ss_pred CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
+.. . ...|+. +.+.+... ....|+++..+.|+.|.++
T Consensus 151 ------~~~------~--~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 151 ------SLP------D--FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred ------CCC------C--chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence 100 0 112543 32222221 1356899999999999883
No 211
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.20 E-value=2.6e-10 Score=104.75 Aligned_cols=114 Identities=15% Similarity=0.073 Sum_probs=80.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
|+++||||+|.||.+++++|.+ +|++|++++|++... . .....+.++.+|++|++++.+++..
T Consensus 1 k~vlItGas~giG~~la~~la~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAA-----QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA 75 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4799999999999999999998 899999999875321 0 0112245678999999877665543
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ++....+++|+.++.++++++... .....+++++||
T Consensus 76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 138 (272)
T PRK07832 76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS 138 (272)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 577888876432111 134667899999999999987532 111346776664
No 212
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.1e-10 Score=104.15 Aligned_cols=104 Identities=17% Similarity=0.025 Sum_probs=78.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
.+|++|||||+|.||.+++++|++ +|++|++++|+.... . ....++..+.+|++|++++.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVE-----AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999875321 0 012357789999999988776654
Q ss_pred ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
.+|.++|+++...... +.....+++|+.++.++++++...
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 5677888877532211 134556789999999998887643
No 213
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.19 E-value=4e-10 Score=115.94 Aligned_cols=155 Identities=13% Similarity=0.080 Sum_probs=100.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+|+||||||+|+||++++++|++ +|++|++++|+.... . .....+..+++|++|++++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~-----~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAA-----EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 58999999999999999999999 899999999975321 0 011356789999999998887776
Q ss_pred ----cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCC
Q 016047 93 ----QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
++|.|+|+|+...... . .....+++|+.+..+++.++... ...-.+++++||... .++.
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a------~~~~-- 560 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA------VYAG-- 560 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh------cCCC--
Confidence 4688899987543211 1 24556788999887766544322 111235666653211 1110
Q ss_pred CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCcee
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF 206 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~ 206 (396)
+ ....|+. +.+...+.. ...|+++..++|+.|+
T Consensus 561 -------------~-~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 561 -------------K-NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred -------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 0 0112654 333332221 2457999999999887
No 214
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.19 E-value=3.7e-10 Score=100.96 Aligned_cols=110 Identities=16% Similarity=0.052 Sum_probs=80.9
Q ss_pred EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047 29 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH 99 (396)
Q Consensus 29 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h 99 (396)
|||||+|+||.+++++|++ +|++|++++|++... .....+++++.+|++|++++.++++. +|.++|
T Consensus 1 lItGas~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAA-----EGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 6999999999999999999 899999999975321 00124678999999999999888876 466777
Q ss_pred EEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccc
Q 016047 100 IFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT 145 (396)
Q Consensus 100 ~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~ 145 (396)
+++..... .++....+++|+.++.+++++.... +..+++++||.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~ 125 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGF 125 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECch
Confidence 76642211 1135667899999999999854432 35677776643
No 215
>PRK08589 short chain dehydrogenase; Validated
Probab=99.19 E-value=3e-10 Score=104.33 Aligned_cols=157 Identities=12% Similarity=0.002 Sum_probs=100.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
.+|++|||||+|.||.+++++|++ +|++|++++|+.... . ....++.++.+|+++++++.++++.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQ-----EGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 357999999999999999999999 899999999973110 0 0123578899999999877665543
Q ss_pred ---CCCeeEEEEeccCC---Cc----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCC
Q 016047 94 ---LTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+|.++|+|+..... .. .....+++|+.++..+++++... ..+-.+++++||...+ ..
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~----- 147 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ-------AA----- 147 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc-------CC-----
Confidence 57788887753211 11 23556789999988777766543 1111467766542211 10
Q ss_pred CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047 163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG 207 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G 207 (396)
. +. ...|+. +.+...... ...|+++..+.|+.|..
T Consensus 148 ~---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T 189 (272)
T PRK08589 148 D---------LY-RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIET 189 (272)
T ss_pred C---------CC-CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence 0 00 112553 222222210 34689999999999876
No 216
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.19 E-value=2e-10 Score=105.78 Aligned_cols=157 Identities=14% Similarity=0.036 Sum_probs=101.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
+++++||||+|+||.+++++|++ +|++|++++|+.... .. ...++.++++|+.|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELAR-----AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999998 899999999975321 00 11357789999999987766554
Q ss_pred --cCCCeeEEEEeccCC---------------------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecccee
Q 016047 93 --QLTDVTHIFYVTWTN---------------------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKH 147 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~---------------------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~ 147 (396)
.+|.++|+|+..... .++....+++|+.++..+++++.+. ..+..+++++||...
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 164 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA 164 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence 567899987742211 1134567899999988766655432 112345666664322
Q ss_pred ecccccccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047 148 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 148 y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~ 208 (396)
| .+ . .... .|+. +.+.+.+.. ...++++..++|+.|..+
T Consensus 165 ~-------~~-------~------~~~~--~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~ 210 (278)
T PRK08277 165 F-------TP-------L------TKVP--AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210 (278)
T ss_pred c-------CC-------C------CCCc--hhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCc
Confidence 2 10 0 0111 1443 222222221 345899999999999884
No 217
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.19 E-value=3.7e-10 Score=102.17 Aligned_cols=118 Identities=13% Similarity=0.075 Sum_probs=81.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCC--ChHHHHHH-
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVS--DPEETQAK- 90 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~--d~~~~~~~- 90 (396)
...+++||||||+|+||.+++++|++ .|++|++++|+.... . ....++.++.+|+. +.+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYAR-----HGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHH-----CCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 34568999999999999999999998 899999999975321 0 01235677888886 45444332
Q ss_pred ------HhcCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 91 ------LSQLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 91 ------~~~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+..+|.|+|+|+..... . +.....+++|+.|+.++++++... ..+..+++++|+
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 33567899988753221 1 134667899999988888877532 123556776664
No 218
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.18 E-value=3.9e-10 Score=103.15 Aligned_cols=158 Identities=16% Similarity=0.085 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
.+|++|||||+|.||.+++++|++ .|++|+++.|++... .. ...++.++++|++|++++..++..
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAK-----AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999998 899999998875321 10 113578899999999988776654
Q ss_pred ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047 94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+|.++|+++...... +.....+++|+.|+..+++++... ..+..+++++||.. ..++.
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~------~~~~~---- 153 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM------SELGR---- 153 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc------ccCCC----
Confidence 677888887533211 134566789999988887776543 11245666665321 11211
Q ss_pred CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
+ .... |+. +.+...+. ....|+.+..++|+.+..+
T Consensus 154 -----~-----~~~~--Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (265)
T PRK07097 154 -----E-----TVSA--YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP 195 (265)
T ss_pred -----C-----CCcc--HHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence 0 1111 443 32222222 1345899999999999884
No 219
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.18 E-value=3e-10 Score=102.60 Aligned_cols=115 Identities=19% Similarity=0.200 Sum_probs=79.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+|.+|||||+|+||++++++|++ .|++|+++.++.... . .....+..+.+|+.|.+++.++++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHK-----DGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999 899988865432111 0 011346678999999988876664
Q ss_pred ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.|+|+++..... .++....+++|+.++.++++++... .....+++++||
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 140 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 467899998753211 1134667899999977766655442 122456776664
No 220
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.18 E-value=3.4e-10 Score=102.87 Aligned_cols=116 Identities=11% Similarity=0.028 Sum_probs=83.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CC-CCCCeeEEEecCCChHHHHHHHh-------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
+|++|||||+|.||.+++++|.+ .|++|++++|..... .. ...++..+++|++|.+++.++++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAE-----AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999 899999888754211 00 12357789999999988877665
Q ss_pred cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccc
Q 016047 93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGT 145 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~ 145 (396)
.+|.++|+|+..... .++....+++|+.++.++++++...- ..-.+++++||.
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~ 146 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM 146 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch
Confidence 367788988743211 11456778999999999988876531 112356666543
No 221
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.18 E-value=3.8e-10 Score=105.84 Aligned_cols=121 Identities=11% Similarity=0.072 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
+|++++|||||++.||.+++++|++ +| ++|++++|+.... . .....+.++.+|++|.+++++++.
T Consensus 1 ~~~k~vlITGas~GIG~aia~~L~~-----~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 75 (314)
T TIGR01289 1 QQKPTVIITGASSGLGLYAAKALAA-----TGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF 75 (314)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHH-----cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4788999999999999999999998 89 9999999875321 1 012357788999999988766553
Q ss_pred -----cCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceee
Q 016047 93 -----QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHY 148 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y 148 (396)
.+|.++|+|+..... . +.....+++|+.|+..+++++... +....+++.+||...+
T Consensus 76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence 366688887642211 1 134556899999987776655442 1113578878776554
No 222
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.17 E-value=2.6e-10 Score=103.48 Aligned_cols=114 Identities=16% Similarity=0.071 Sum_probs=80.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----- 93 (396)
|++|||||+|+||.+++++|++ .|++|+++.|++... . ....++.++.+|++|++++.+++..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 75 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAK-----DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF 75 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999998 899999999875321 0 0123578899999999988776543
Q ss_pred --CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 94 --LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ......+++|+.++..+++++.+. .....+++++||
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 137 (254)
T TIGR02415 76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAAS 137 (254)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 577999887532211 133567899999988777766543 111246666553
No 223
>PRK06484 short chain dehydrogenase; Validated
Probab=99.17 E-value=2.6e-10 Score=114.64 Aligned_cols=160 Identities=12% Similarity=-0.002 Sum_probs=105.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
...+|++|||||+|.||.+++++|.+ +|++|++++|+.... . ....++..+.+|++|++++.++++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAA-----AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence 34568999999999999999999999 899999999975321 0 0113566789999999887766653
Q ss_pred ---CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047 94 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
+|.++|+|+...... ++....+++|+.|+.++++++...-.+-.+++++||...+ .+ .
T Consensus 341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~------~ 408 (520)
T PRK06484 341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL------LA------L 408 (520)
T ss_pred cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc------CC------C
Confidence 577888877532111 1346678999999999998877652223466666542111 00 0
Q ss_pred CccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047 164 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~ 208 (396)
+. ...|+. +.+.+... ....|+++..+.|+.|..+
T Consensus 409 ---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 450 (520)
T PRK06484 409 ---------PP-RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETP 450 (520)
T ss_pred ---------CC-CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 10 112543 22222211 1346899999999999773
No 224
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.17 E-value=1.7e-10 Score=103.59 Aligned_cols=104 Identities=18% Similarity=0.039 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHhc-------C
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQ-------L 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~-------~ 94 (396)
|+|++|||||+|.||.+++++|.+ +|++|++++|++..... ...+++++.+|++|++++.+++.. +
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLA-----QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 678999999999999999999998 89999999997643210 112467899999999877665543 5
Q ss_pred CCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 95 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 95 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
|.++|+|+..... . ++....+++|+.++..+.+++...
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~ 119 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDL 119 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 6788887642211 1 134567899999998777766553
No 225
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.17 E-value=5.1e-10 Score=102.36 Aligned_cols=116 Identities=16% Similarity=0.077 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
+++++|||||+|.||.+++++|++ +|++|++++|++... . ....++..+.+|++|.+++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLE-----AGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV 81 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 468999999999999999999998 899999999975321 0 011357789999999988766554
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.++|+|+...... ......+++|+.+..++++++... ..+..+++++||
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 146 (265)
T PRK07062 82 EARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNS 146 (265)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecc
Confidence 3577888877432111 134556788888877666655432 112346666654
No 226
>PRK05855 short chain dehydrogenase; Validated
Probab=99.16 E-value=3.3e-10 Score=115.42 Aligned_cols=155 Identities=12% Similarity=0.006 Sum_probs=103.6
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
.+++|||||+|+||++++++|.+ +|++|++++|+.... . ....++.++.+|++|++++.++++.
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAR-----EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 47999999999999999999998 899999999975321 0 0123578899999999988776654
Q ss_pred ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCC
Q 016047 94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+|.++|+|+...... .+....+++|+.|+.++++++... ...-.+++++||...|..
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 458 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP----------- 458 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----------
Confidence 577888887543211 134567889999999988876543 111246777665433311
Q ss_pred CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047 162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
. + ....|+..|. +.... ...|+++++++|+.|-.
T Consensus 459 -~---------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 459 -S---------R-SLPAYATSKAAVLMLSECLRAEL-AAAGIGVTAICPGFVDT 500 (582)
T ss_pred -C---------C-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeCCCcc
Confidence 0 0 0112553322 22222 45689999999998755
No 227
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.16 E-value=4.1e-10 Score=106.14 Aligned_cols=116 Identities=16% Similarity=0.086 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
.+++||||||+|.||.+++++|.+ +|++|++++|+.... . .....+.++.+|++|+++++++++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~-----~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFAR-----RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 357999999999999999999999 899999999975321 0 012356788999999998877663
Q ss_pred ---cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 93 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+|.++|+|+..... . +.....+++|+.|+.++.+++... ..+..+++.++|
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS 143 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMIS 143 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467788887743221 1 133557899999999887776432 111235555543
No 228
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.16 E-value=4.8e-10 Score=102.50 Aligned_cols=155 Identities=13% Similarity=0.074 Sum_probs=100.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
+|++|||||+|.||.+++++|++ +|++|++++|+.... . ....++.++.+|++|+++++++++.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLAR-----AGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 57999999999999999999999 899999999975321 0 0123678999999999888776653
Q ss_pred ---CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047 94 ---LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD 162 (396)
Q Consensus 94 ---~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~ 162 (396)
+|.++|+++..... .++....+++|+.+...+++++... ..+..+++++||...+ .
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~-------~------ 149 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK-------E------ 149 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc-------C------
Confidence 56677877642211 1145567889988876666555432 1123467766643211 0
Q ss_pred CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
+ .+. ...|.. .+.+...+ ...|+++..+.|+.|-.
T Consensus 150 -~-------~~~-~~~y~asKaal~~l~~~la~el-~~~gIrVn~v~PG~v~T 192 (263)
T PRK08339 150 -P-------IPN-IALSNVVRISMAGLVRTLAKEL-GPKGITVNGIMPGIIRT 192 (263)
T ss_pred -C-------CCc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcc
Confidence 0 010 011331 33333333 45689999999998865
No 229
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.16 E-value=4.1e-10 Score=95.87 Aligned_cols=112 Identities=22% Similarity=0.093 Sum_probs=81.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCeeEEEecCCChHHHHHHHhc-
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQ- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~~~~~~~~- 93 (396)
++++||||+|+||.+++++|.+ +|+ .|+++.|++..... ...++.++.+|+++++.+.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAE-----RGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI 75 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHH-----hhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4799999999999999999998 675 68888886543210 123567899999999877766544
Q ss_pred ------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 94 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 94 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
+|.|+|+++...... ++....+++|+.++.++++++.+.+ ..+++++|+
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~ii~~ss 136 (180)
T smart00822 76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP--LDFFVLFSS 136 (180)
T ss_pred HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC--cceEEEEcc
Confidence 477888887432211 1345678999999999999997643 456666653
No 230
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3e-10 Score=101.18 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=81.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh----cCCCeeE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS----QLTDVTH 99 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~V~h 99 (396)
++++||||+|.||++++++|.+ +|++|++++|+.... .....+++++++|++|+++++++++ .+|.++|
T Consensus 1 m~vlItGas~giG~~ia~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRN-----DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 3799999999999999999998 899999999975321 1011246789999999998887765 4677889
Q ss_pred EEEeccC---C--------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 100 IFYVTWT---N--------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 100 ~a~~~~~---~--------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
+++..+. . .++....+++|+.++.++++++...-.+-.+++.+|
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is 130 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV 130 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence 8763211 0 113456789999999999998876411123555554
No 231
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.15 E-value=8e-10 Score=96.55 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=75.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh---cCCCeeEEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHIFY 102 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~h~a~ 102 (396)
|++|||||+|.||.+++++|.+ + ++|++++|++. .+++|++|+++++++++ .+|.++|+++
T Consensus 1 ~~vlItGas~giG~~la~~l~~-----~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSK-----R-HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-----c-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence 4799999999999999999998 6 78999998642 46899999998888776 4667888876
Q ss_pred eccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 103 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 103 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
...... .+....+++|+.++.++++++.+.-.+-..++++|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 422111 13455678999999999998876421223455554
No 232
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.8e-10 Score=102.27 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=76.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCC-----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT----- 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~----- 95 (396)
|+||||||+|+||++++++|++ +|++|++++|.+... .....+++++.+|++|++++..+++.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLE-----KGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHh-----cCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 5899999999999999999999 899999999976221 0112467899999999988877665431
Q ss_pred ------CeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecc
Q 016047 96 ------DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG 144 (396)
Q Consensus 96 ------~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~ 144 (396)
.++|+++...... ......+++|+.+...+++++...- ....+++++||
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS 141 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence 2455555322111 1345567889988666665544331 11245666653
No 233
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.14 E-value=5.1e-10 Score=104.13 Aligned_cols=116 Identities=19% Similarity=0.075 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.+++||||||+|.||.+++++|.+ .|++|++++|+.... ......+..+.+|++|++++.++++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHA-----RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999975321 1112345566799999988776654
Q ss_pred --cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047 93 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG 144 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~ 144 (396)
.+|.|+|+|+..... . ++....+++|+.|+.++++++... ..+..+++++||
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 467788888753211 1 134567899999999999987653 111246776664
No 234
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.14 E-value=2.5e-10 Score=104.32 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=77.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
+++++||||+|+||.+++++|++ .|++|++++|+.... . ....++.++++|+.|.+++.++++ .
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVA-----EGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999 899999999975321 0 012357889999999987766554 4
Q ss_pred CCCeeEEEEeccCC-----Cc------cHHHHHHhHHHHHHHHHHHHccc
Q 016047 94 LTDVTHIFYVTWTN-----RS------TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 94 ~~~V~h~a~~~~~~-----~~------~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
+|.++|+|+..... .+ .....+++|+.++.++++++.+.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 129 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA 129 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence 57788888742110 01 23467899999999999988764
No 235
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.13 E-value=5.5e-10 Score=102.77 Aligned_cols=101 Identities=20% Similarity=0.145 Sum_probs=77.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
|+|.++|||| |+||.+++++|. +|++|++++|+.... .. ...++.++.+|++|++++.++++
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 7789999998 789999999994 589999999975321 00 11357789999999988877665
Q ss_pred --cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 --QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
.+|.++|+|+... ...+....+++|+.|+.++++++.+.
T Consensus 74 ~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~ 114 (275)
T PRK06940 74 LGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKV 114 (275)
T ss_pred cCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 3667888876432 22356788999999999999988764
No 236
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.12 E-value=1.5e-09 Score=99.12 Aligned_cols=116 Identities=13% Similarity=-0.043 Sum_probs=78.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-- 92 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~-- 92 (396)
..+|++|||||+|.||.+++++|++ +|++|+++.|+.... . ....++.++.+|++|.+++.+++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~-----~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGK-----EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 3468999999999999999999999 899998888854211 0 012356789999999988776654
Q ss_pred -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecc
Q 016047 93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTG 144 (396)
Q Consensus 93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~ 144 (396)
.+|.++|+++...... +.....+++|+.++.++++++ .+.+ .-.+++++||
T Consensus 80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS 145 (261)
T PRK08936 80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSS 145 (261)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence 3577888877432211 134456799988876655544 3322 1245665553
No 237
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1.4e-09 Score=99.39 Aligned_cols=105 Identities=15% Similarity=0.037 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCC-hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh
Q 016047 23 SYQSVALIVGVTG-IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 23 ~~~~~iLVtGatG-fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
..++++|||||+| -||..+++.|++ +|++|++++|+.... . ....++.++++|+++++++.++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALE-----EGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 3468999999998 599999999998 899999998865321 0 111357889999999988776664
Q ss_pred -------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
.+|.|+|+++..... . ......+++|+.++.++++++...
T Consensus 90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY 142 (262)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 357789988743211 1 134556789999999988877653
No 238
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.09 E-value=7.1e-10 Score=101.32 Aligned_cols=115 Identities=17% Similarity=0.074 Sum_probs=81.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
+|++|||||+|+||.+++++|++ .|++|++++|++... . ....++.++++|++|++++.++++ .
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLA-----EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 57999999999999999999999 899999999975321 0 012357889999999988776654 3
Q ss_pred CCCeeEEEEeccC--CC-c-c-------HHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047 94 LTDVTHIFYVTWT--NR-S-T-------EAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG 144 (396)
Q Consensus 94 ~~~V~h~a~~~~~--~~-~-~-------~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~ 144 (396)
+|.++|+|+.... .. . + ....+++|+.++.++++++...- .+-.++++++|
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS 143 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLS 143 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECC
Confidence 6778888774321 10 1 1 34567899999998888876541 11235665554
No 239
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.09 E-value=1.5e-09 Score=102.11 Aligned_cols=160 Identities=18% Similarity=0.190 Sum_probs=94.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC----CCCCeeEEEecCCChHHHHHHHhcCCC--
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN----ADHLVEYVQCDVSDPEETQAKLSQLTD-- 96 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~----~~~~v~~~~~Dl~d~~~~~~~~~~~~~-- 96 (396)
..+|||+||||.+|+.+++.|++ +|+.|++++|+.... .. .+.....+..|...+.+....+.....
T Consensus 79 ~~~VlVvGatG~vG~~iv~~llk-----rgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILLK-----RGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHHH-----CCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 47999999999999999999999 899999999986432 11 234555666666555443332322221
Q ss_pred eeEEEEeccCCCcc--HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047 97 VTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA 174 (396)
Q Consensus 97 V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~ 174 (396)
+..+..++...... -..-..+...|++|+++||+.++ ++|++++++ +|.. ......+..-.
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG--vk~~vlv~s----------i~~~-----~~~~~~~~~~~ 216 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG--VKRVVLVGS----------IGGT-----KFNQPPNILLL 216 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC--CceEEEEEe----------ecCc-----ccCCCchhhhh
Confidence 11111111111111 12234678899999999998876 899998763 2211 00000000000
Q ss_pred CCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
....+.....+.++. ++.|++++|+||+...-
T Consensus 217 ~~~~~~~k~~~e~~~-~~Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 217 NGLVLKAKLKAEKFL-QDSGLPYTIIRPGGLEQ 248 (411)
T ss_pred hhhhhHHHHhHHHHH-HhcCCCcEEEecccccc
Confidence 001112244445554 78899999999886655
No 240
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.08 E-value=5.6e-10 Score=100.76 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=80.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
++++|||||+|+||.+++++|++ +|++|++++|+..... ........+.+|++|.+++.+.+..+|.++|+|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRA-----KGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 47999999999999999999998 8999999998752211 0111235789999999999988888999999987
Q ss_pred eccCC---CccHHHHHHhHHHHHHHHHHHHccc
Q 016047 103 VTWTN---RSTEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 103 ~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
..... .++....+++|+.|+.++++++...
T Consensus 89 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 89 INPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred cCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 53221 1245677899999999999987654
No 241
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.06 E-value=7.7e-10 Score=99.50 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=77.9
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc------
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ------ 93 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~------ 93 (396)
||||||+|+||.+++++|.+ +|++|++++|+.... . ....++.++.+|++|.+++.++++.
T Consensus 1 vlItGas~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAA-----DGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHG 75 (239)
T ss_pred CEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 69999999999999999998 899999998764221 0 0124688999999999887766543
Q ss_pred -CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecc
Q 016047 94 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTG 144 (396)
Q Consensus 94 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~ 144 (396)
.|.++|+++..... ..+....+++|+.++.++++++. .. ..+..+++++||
T Consensus 76 ~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS 136 (239)
T TIGR01831 76 AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS 136 (239)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 45577776532211 11456678999999999988763 11 112346666654
No 242
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.05 E-value=1.9e-09 Score=100.74 Aligned_cols=103 Identities=15% Similarity=-0.029 Sum_probs=77.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.+|++|||||+|+||.+++++|++ +|++|++++|..... . ....++.++.+|++|++++.++++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~-----~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLAR-----LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 358999999999999999999999 899999988754211 0 012357789999999987776654
Q ss_pred ---cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHcc
Q 016047 93 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
.+|.++|+|+..... . .+....+++|+.|+.++++++..
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 133 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 467889988753321 1 14566789999999999988753
No 243
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.04 E-value=2.6e-09 Score=97.48 Aligned_cols=116 Identities=7% Similarity=-0.038 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHhc-
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~~- 93 (396)
.+|+||||||++.||.+++++|++ .|++|+++.|+.... . ....++.++.+|++|++++++++..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQ-----SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 358999999999999999999999 899998887643211 0 0123578999999999887766653
Q ss_pred ------CCCeeEEEEeccC-------C--C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 94 ------LTDVTHIFYVTWT-------N--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 94 ------~~~V~h~a~~~~~-------~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
+|.++|+|+.... . . ......+++|+.+...+.+++... ..+-.+++++||
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 152 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS 152 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence 5668888763211 0 0 123446778888766655544432 111346776664
No 244
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.04 E-value=8.7e-10 Score=105.80 Aligned_cols=104 Identities=12% Similarity=0.105 Sum_probs=81.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
++|+|+||||+|+||++++++|.+ +|++|++++|++... . ....++..+.+|++|++++.+.+.++|.++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~-----~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQ-----QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 358999999999999999999998 899999999875321 0 0112466889999999999999999999999
Q ss_pred EEEeccCCCc---cHHHHHHhHHHHHHHHHHHHccc
Q 016047 100 IFYVTWTNRS---TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 100 ~a~~~~~~~~---~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
+|+....... +....+++|+.|+.++++++.+.
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8874322111 34677899999999999987653
No 245
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.02 E-value=1.3e-08 Score=91.35 Aligned_cols=103 Identities=21% Similarity=0.182 Sum_probs=72.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH---HhcCCCeeEEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK---LSQLTDVTHIFY 102 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~~~~~~V~h~a~ 102 (396)
|+|+||||+|+||++++++|++.. .++.|....|..... ....++.++++|+++.++++.. +..+|.|+|+++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~---~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG 76 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERY---PDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG 76 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhC---CCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence 489999999999999999999821 145676666654332 1235788999999999876654 345777888887
Q ss_pred eccCCC------------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047 103 VTWTNR------------STEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 103 ~~~~~~------------~~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
...... +.....+++|+.++..+.+++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 118 (235)
T PRK09009 77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK 118 (235)
T ss_pred cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 543210 013456789999988888777654
No 246
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.02 E-value=4.1e-09 Score=96.08 Aligned_cols=114 Identities=11% Similarity=-0.009 Sum_probs=75.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
|+||||||+|.||..++++|.+ +|++|++++|++... .....++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLK-----KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999999 899999999975321 1111357789999999988876664
Q ss_pred cCCCeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047 93 QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG 144 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~ 144 (396)
.+|.++|+|+..... .+ +....+.+|+.++..+..++... ...-.+++++||
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS 138 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSS 138 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 467788887743211 11 22344577877755444332111 112346676654
No 247
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.01 E-value=3.1e-09 Score=104.84 Aligned_cols=116 Identities=15% Similarity=0.076 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS------- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~------- 92 (396)
.++++|||||+|.||..++++|.+ +|++|++++|..... .....+...+.+|++|++++.++++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~-----~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLAR-----DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999998 899999998853211 0011234688999999987766554
Q ss_pred cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047 93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 144 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 144 (396)
.+|.|+|+++..... .+.....+++|+.|+.++.+++.... .+-.+++++||
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 467799988743221 11345678999999999999887631 12246666653
No 248
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.00 E-value=3.8e-09 Score=96.73 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=71.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCeeEEEecCCChHHH----HHHH-
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEET----QAKL- 91 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~~----~~~~- 91 (396)
+.++||||+|+||.+++++|++ +|++|+++.|+.... +. ....+.++.+|++|.+++ ++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~ 76 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQ-----EGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIID 76 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHh-----CCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHH
Confidence 5799999999999999999999 899999887653211 10 112456789999998744 2222
Q ss_pred ------hcCCCeeEEEEeccCC----Cc-------------cHHHHHHhHHHHHHHHHHHHccc
Q 016047 92 ------SQLTDVTHIFYVTWTN----RS-------------TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 92 ------~~~~~V~h~a~~~~~~----~~-------------~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
..+|.|+|+|+..... .+ .....+++|+.++..+++++...
T Consensus 77 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (267)
T TIGR02685 77 ACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQR 140 (267)
T ss_pred HHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3467788888743211 01 13456899999999998876543
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.98 E-value=5.4e-09 Score=98.22 Aligned_cols=116 Identities=22% Similarity=0.186 Sum_probs=79.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCC--hHH---HHH
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSD--PEE---TQA 89 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d--~~~---~~~ 89 (396)
.++.++||||||.||.+++++|.+ +|++|++++|++... . .....+..+.+|+++ .+. +.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~-----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLAR-----KGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence 368999999999999999999999 899999999986421 0 011356778899985 232 334
Q ss_pred HHhcCC--CeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047 90 KLSQLT--DVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG 144 (396)
Q Consensus 90 ~~~~~~--~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~ 144 (396)
.+.+.| .++|+|+..... .+ +....+++|+.|+.++++++... ..+..+++++||
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 193 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 444444 688888754221 11 23457899999999988877543 112456776664
No 250
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.95 E-value=9e-09 Score=93.44 Aligned_cols=115 Identities=15% Similarity=0.092 Sum_probs=79.7
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047 24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
.+|++|||||+ +-||..++++|++ .|++|++..|+.... ......+.++++|++|+++++++++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKD-----QGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 35899999999 7999999999999 899999998863110 0112357789999999987766543
Q ss_pred --cCCCeeEEEEeccC-----C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 93 --QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 93 --~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
.+|.++|+|+.... . . ++....+++|+.++..+++++...-.+-.+++++|
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~is 143 (252)
T PRK06079 81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLT 143 (252)
T ss_pred hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEe
Confidence 35778888774321 0 1 13456789999999888887765421123455554
No 251
>PRK06484 short chain dehydrogenase; Validated
Probab=98.92 E-value=9.6e-09 Score=103.36 Aligned_cols=116 Identities=16% Similarity=0.053 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C--CCCCeeEEEecCCChHHHHHHHhc------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLSQ------ 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~~~~~~~~------ 93 (396)
.+|++|||||++.||.+++++|.+ .|++|++++|+..... . ...++.++.+|++|++++.++++.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFAR-----AGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999 8999999999754310 0 113567799999999887766543
Q ss_pred -CCCeeEEEEeccC------CC--ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecc
Q 016047 94 -LTDVTHIFYVTWT------NR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG 144 (396)
Q Consensus 94 -~~~V~h~a~~~~~------~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~ 144 (396)
+|.++|+|+.... .. ++....+++|+.++..+++++...- ..-.+++++||
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS 141 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS 141 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 6778888764211 11 1356678999999999988887641 11125666653
No 252
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.91 E-value=3.2e-08 Score=90.17 Aligned_cols=114 Identities=15% Similarity=0.072 Sum_probs=80.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
+++||||||+|.||.++++.|++ .|++|++++|++... .. ...++.++.+|++|++++.++++.
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAA-----EGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 58999999999999999999998 899999999975321 00 123578899999999988776654
Q ss_pred CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047 94 LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT 143 (396)
Q Consensus 94 ~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s 143 (396)
+|.++|+++..... . ++....+++|+.+..++++++... ..+-.+++++|
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI 139 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 56678876642111 1 134567899999998888876433 11123566555
No 253
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.89 E-value=1.1e-08 Score=83.68 Aligned_cols=150 Identities=18% Similarity=0.240 Sum_probs=98.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW 105 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~ 105 (396)
+..+|.||||-.|+.|++++++.+..+ +|+++.|+.........++.....|...-+++...+++.|..|.+-+.+.
T Consensus 19 ~s~fvlGAtG~~G~~llk~~~E~~~FS---KV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 19 MSGFVLGATGLCGGGLLKHAQEAPQFS---KVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR 95 (238)
T ss_pred cceEEEeccccccHHHHHHHHhcccce---eEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence 689999999999999999999976554 79999998533222346788889999888889999999997666655432
Q ss_pred CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh-----
Q 016047 106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----- 180 (396)
Q Consensus 106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~----- 180 (396)
.... .+...++.-.-...+.++|++.+ +++|+++||.....| +++.|-
T Consensus 96 gkaG-adgfykvDhDyvl~~A~~AKe~G--ck~fvLvSS~GAd~s------------------------SrFlY~k~KGE 148 (238)
T KOG4039|consen 96 GKAG-ADGFYKVDHDYVLQLAQAAKEKG--CKTFVLVSSAGADPS------------------------SRFLYMKMKGE 148 (238)
T ss_pred cccc-cCceEeechHHHHHHHHHHHhCC--CeEEEEEeccCCCcc------------------------cceeeeeccch
Confidence 2211 11222222222223455666544 899998875433322 233333
Q ss_pred HHHHHHHHhhcCCCe-eEEEEcCCceeecCC
Q 016047 181 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSP 210 (396)
Q Consensus 181 ~e~~l~~~~~~~~~~-~~~ilRp~~v~G~~~ 210 (396)
.|+-+.+ .++ .++|+||+.+.|..+
T Consensus 149 vE~~v~e-----L~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 149 VERDVIE-----LDFKHIIILRPGPLLGERT 174 (238)
T ss_pred hhhhhhh-----ccccEEEEecCcceecccc
Confidence 2444444 233 689999999999543
No 254
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.89 E-value=2.8e-08 Score=89.69 Aligned_cols=120 Identities=21% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHH---
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL--- 91 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~--- 91 (396)
.+|.|+||||+.-||.+++.+|.+ .|.+++.+.|+.... .....++.++++|++|.+++.+++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~-----~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAK-----RGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-----CCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 368999999999999999999999 899877777764221 111126899999999999887665
Q ss_pred ----hcCCCeeEEEEeccCCC-c-----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceee
Q 016047 92 ----SQLTDVTHIFYVTWTNR-S-----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHY 148 (396)
Q Consensus 92 ----~~~~~V~h~a~~~~~~~-~-----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y 148 (396)
.++|..++.|+...... + +....+++|+.|+..+..++-..- .+--|++.++|+..+
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 33555555555433111 1 334578999999998888777651 123577777754433
No 255
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.86 E-value=4.1e-08 Score=89.35 Aligned_cols=116 Identities=10% Similarity=0.049 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCC---------C----C----C-CCCCCeeEEEecCCC
Q 016047 24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPK---------P----N----W-NADHLVEYVQCDVSD 83 (396)
Q Consensus 24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~---------~----~----~-~~~~~v~~~~~Dl~d 83 (396)
.+|+||||||+| .||.+++++|++ +|++|+++.|... . . . ....++.++++|++|
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~-----~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~ 79 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAE-----AGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ 79 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 458999999995 799999999999 8999988754210 0 0 0 011356788999999
Q ss_pred hHHHHHHHhc-------CCCeeEEEEeccCC---Cc---cHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecc
Q 016047 84 PEETQAKLSQ-------LTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG 144 (396)
Q Consensus 84 ~~~~~~~~~~-------~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~ 144 (396)
.+++.+++.. .|.|+|.|+..... .. .....+++|+.+...+..++... . ..-.+++++||
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 155 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTS 155 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 9887766643 46677777643211 11 34456899999988876554332 1 11346776653
No 256
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.2e-08 Score=92.63 Aligned_cols=102 Identities=12% Similarity=-0.021 Sum_probs=74.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC---------CCC------C-CCCCCeeEEEecCCChHHH
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---------KPN------W-NADHLVEYVQCDVSDPEET 87 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~---------~~~------~-~~~~~v~~~~~Dl~d~~~~ 87 (396)
.+|++|||||++.||.+++++|++ .|++|++++|+. ... . ....++.++.+|++|++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~-----~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 79 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGA 79 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHH
Confidence 458999999999999999999998 899999888754 110 0 0113567889999999877
Q ss_pred HHHHh-------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHc
Q 016047 88 QAKLS-------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI 130 (396)
Q Consensus 88 ~~~~~-------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~ 130 (396)
.++++ .+|.++|+|+..... . ++....+++|+.++.++++++.
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 80 ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 66553 356788887653211 1 1456678999999988887765
No 257
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.85 E-value=8.5e-08 Score=87.31 Aligned_cols=115 Identities=15% Similarity=0.057 Sum_probs=78.2
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047 24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS- 92 (396)
Q Consensus 24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~- 92 (396)
.+|.++||||+ +-||.+++++|.+ +|++|+++.|+.... .....++.++++|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHN-----AGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 35899999997 8999999999999 899999887753110 0012357789999999988766554
Q ss_pred ------cCCCeeEEEEeccC-----C-Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 93 ------QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 93 ------~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
.+|.++|+|+.... . .+ .....+++|+.++..+++++...-.+-.+++++|
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~is 147 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLT 147 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEc
Confidence 35668888764321 0 11 2344678999998888777665421123566555
No 258
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.84 E-value=6.5e-08 Score=88.01 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=74.2
Q ss_pred CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC-CC---C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK-PN---W--NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~---~--~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.+|+++|||| ++-||.+++++|.+ +|++|++++|+.. .. . .....+.++.+|++|+++++++++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQE-----QGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHH-----CCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 3589999999 89999999999999 8999999987531 11 0 011256789999999987766543
Q ss_pred ----cCCCeeEEEEeccC------C-Cc---cHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 ----QLTDVTHIFYVTWT------N-RS---TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~------~-~~---~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
.+|.++|+|+.... . .. .....+++|+.++.++.+++...
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 134 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL 134 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 36678888775311 0 11 23446899999998888776643
No 259
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.82 E-value=5.1e-08 Score=88.84 Aligned_cols=114 Identities=15% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+|.+|||||+ +-||.+++++|++ +|++|++++|+.... .. ....+.++++|++|++++++++.
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRA-----LGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence 5899999998 5899999999999 899999998874311 00 11234578999999987766543
Q ss_pred ---cCCCeeEEEEeccCC----------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 93 ---QLTDVTHIFYVTWTN----------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~~----------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
.+|.++|+|+..... .++....+++|+.++.++++++...-.+-.+++.+|
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~is 148 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMS 148 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 357788887643210 013466789999999999887765421113455544
No 260
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.82 E-value=4.7e-08 Score=89.06 Aligned_cols=115 Identities=14% Similarity=0.121 Sum_probs=78.5
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
++|.++||||+ +-||..++++|.+ .|++|++..|+.... .. ....+.++.+|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHA-----AGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence 45899999986 7999999999999 899998876543210 00 11235688999999988776554
Q ss_pred -------cCCCeeEEEEeccC-----CC-----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 93 -------QLTDVTHIFYVTWT-----NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~-----~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
.+|.++|+|+.... .. +.....+++|+.++..+++++...-.+-.+++++|
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~is 147 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLT 147 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 35678888774321 11 13456789999999988887765411124566555
No 261
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.82 E-value=4.2e-08 Score=90.05 Aligned_cols=155 Identities=13% Similarity=0.047 Sum_probs=96.8
Q ss_pred CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
+|.+|||||++ -||..++++|.+ .|++|++..|+.... . ........+++|++|+++++++++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAA-----QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHh-----CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 58999999996 899999999999 899999988864210 0 000123468999999987766554
Q ss_pred ---cCCCeeEEEEeccC-----C-----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC
Q 016047 93 ---QLTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK 159 (396)
Q Consensus 93 ---~~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~ 159 (396)
.+|.++|+|+.... . .++....+++|+.++.++++++...-.+-.+++.+||.. +.
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~---------~~-- 150 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG---------ST-- 150 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC---------cc--
Confidence 35668888764321 0 013456789999999888887654311113455544311 10
Q ss_pred CCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 160 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 160 ~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
.+. |. ...|+. .+.+...+ ...|+++..+.|+.|-.
T Consensus 151 ---~~~-------~~-~~~Y~asKaAl~~l~r~la~el-~~~gIrVn~v~PG~i~T 194 (271)
T PRK06505 151 ---RVM-------PN-YNVMGVAKAALEASVRYLAADY-GPQGIRVNAISAGPVRT 194 (271)
T ss_pred ---ccC-------Cc-cchhhhhHHHHHHHHHHHHHHH-hhcCeEEEEEecCCccc
Confidence 000 10 011442 33333333 45689999999998866
No 262
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=7.9e-08 Score=88.27 Aligned_cols=114 Identities=16% Similarity=0.066 Sum_probs=78.2
Q ss_pred CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
+|++|||||+ +-||.+++++|.+ +|++|++..|+.. .. .. .......+++|++|+++++++++.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~-----~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRA-----AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence 5899999997 7999999999999 8999988877521 10 00 112345789999999887765543
Q ss_pred ----CCCeeEEEEeccC-----C-----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 94 ----LTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 94 ----~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
+|.++|+|+.... . .++....+++|+.++..+++++...-.+-.+++.+|
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is 148 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLT 148 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 5668887764321 0 013466789999999999988765421123555554
No 263
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.79 E-value=3.6e-08 Score=84.22 Aligned_cols=154 Identities=18% Similarity=0.134 Sum_probs=101.8
Q ss_pred CcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC--CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047 19 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA--DHLVEYVQCDVSDPEETQAKLSQLTD 96 (396)
Q Consensus 19 ~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~ 96 (396)
++.+......|+.|++||.|+++++.-.. .++.|-.+.|+..+...+ ...+.+.++|....+-++..+.+...
T Consensus 46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~-----vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~ 120 (283)
T KOG4288|consen 46 DKQDVEVEWTLVLGGNPFSGSEVLKNATN-----VVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTF 120 (283)
T ss_pred chhhhhHHHHhhhcCCCcchHHHHHHHHh-----hceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcc
Confidence 33333335789999999999999999998 799999999985433111 14567788888777666777777766
Q ss_pred eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047 97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN 176 (396)
Q Consensus 97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~ 176 (396)
++-+++. ..+...+.+.|=....+.++++.+++ +++|+|+|. ..||-. |..+ .
T Consensus 121 v~e~~gg----fgn~~~m~~ing~ani~a~kaa~~~g--v~~fvyISa--------~d~~~~-----------~~i~--r 173 (283)
T KOG4288|consen 121 VYEMMGG----FGNIILMDRINGTANINAVKAAAKAG--VPRFVYISA--------HDFGLP-----------PLIP--R 173 (283)
T ss_pred cHHHhcC----ccchHHHHHhccHhhHHHHHHHHHcC--CceEEEEEh--------hhcCCC-----------Cccc--h
Confidence 6666442 22445555667666667777787765 888988862 122210 1111 2
Q ss_pred cchh----HHHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047 177 FYYT----LEDILFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 177 ~~y~----~e~~l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
.|+. .|..+. ..++++-+++||+.|||.
T Consensus 174 GY~~gKR~AE~Ell----~~~~~rgiilRPGFiyg~ 205 (283)
T KOG4288|consen 174 GYIEGKREAEAELL----KKFRFRGIILRPGFIYGT 205 (283)
T ss_pred hhhccchHHHHHHH----HhcCCCceeeccceeecc
Confidence 2333 233333 345688999999999996
No 264
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.78 E-value=5.2e-08 Score=88.62 Aligned_cols=117 Identities=15% Similarity=0.004 Sum_probs=77.3
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHhcC---
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL--- 94 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~~~--- 94 (396)
.+|||||+|.||.+++++|.+.... .|++|+++.|+.... .. ....+.++.+|++|+++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKS-PGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhcc-CCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 5899999999999999999841100 488999999975321 10 1235788999999998877665432
Q ss_pred --------CCeeEEEEeccCC----C-----ccHHHHHHhHHHHHHHHHHHHcccC----CCcceEEEecc
Q 016047 95 --------TDVTHIFYVTWTN----R-----STEAENCKINGSMFRNVLRAVIPNA----PNLRHVCLQTG 144 (396)
Q Consensus 95 --------~~V~h~a~~~~~~----~-----~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~~~~~s~ 144 (396)
+.++|+|+..... . +.....+++|+.++..+.+++.+.- ..-.+++++||
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS 151 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS 151 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECC
Confidence 2577877642110 1 1235678999999887777665431 11235666654
No 265
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.78 E-value=9.6e-08 Score=87.19 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=72.1
Q ss_pred CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--C---CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047 25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---WN-ADHLVEYVQCDVSDPEETQAKLSQ--- 93 (396)
Q Consensus 25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~--- 93 (396)
+|++|||||++ -||.+++++|.+ +|++|+++.|+... . .. ..+.+.++.+|++|+++++++++.
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~-----~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHH-----CCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 57999999985 899999999999 89999988876310 0 10 113456789999999988766643
Q ss_pred ----CCCeeEEEEeccCCC-----------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047 94 ----LTDVTHIFYVTWTNR-----------STEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 94 ----~~~V~h~a~~~~~~~-----------~~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
+|.++|+|+...... ......+++|+.+...+.+++..
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 133 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 567888876432110 12345678999998888777654
No 266
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=9.7e-08 Score=87.15 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=75.6
Q ss_pred CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.+|++||||| ++-||.+++++|.+ +|++|++..|..... .. .......+++|++|++++++++.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACRE-----QGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence 3579999997 67999999999999 899998877642110 10 11234578999999988776553
Q ss_pred ----cCCCeeEEEEeccCC-------Cc----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEec
Q 016047 93 ----QLTDVTHIFYVTWTN-------RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQT 143 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~-------~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s 143 (396)
.+|.++|+|+..... .+ .....+++|+.++..+.+++... ..+-.+++.+|
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~is 146 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALS 146 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEc
Confidence 367788888754211 01 23445688999988777765543 11113455554
No 267
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=7.6e-08 Score=88.45 Aligned_cols=113 Identities=15% Similarity=0.039 Sum_probs=77.5
Q ss_pred CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--C---C-CC-CCCeeEEEecCCChHHHHHHHhc--
Q 016047 25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---W-NA-DHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~---~-~~-~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
+|.+|||||+ +-||..++++|.+ .|++|++.+|+... . . .. ... ..+.+|++|.+++.++++.
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~-----~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFE-----QGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence 5899999997 7899999999999 89999998886310 0 0 00 112 5789999999887665543
Q ss_pred -----CCCeeEEEEeccC-----C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 94 -----LTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 94 -----~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
+|.++|+|+.... . . +.....+++|+.|+..+.+++...-.+-.+++.+|
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~is 143 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLS 143 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEe
Confidence 5668888764211 0 1 13456789999999888887765411113555555
No 268
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.76 E-value=1e-07 Score=85.01 Aligned_cols=102 Identities=8% Similarity=-0.055 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---- 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---- 92 (396)
.+++++||||++-||..++++|.+ +|++|+++.|+.... . ....++..+.+|+.|+++++++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFAR-----LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999 899999999875421 0 012346678899999987765543
Q ss_pred ----cCCCeeEEEEeccCC----Cc---cHHHHHHhHHHHHHHHHHHHc
Q 016047 93 ----QLTDVTHIFYVTWTN----RS---TEAENCKINGSMFRNVLRAVI 130 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~----~~---~~~~~~~~nv~gt~~ll~a~~ 130 (396)
.+|.++|+++..... .. .....+++|+.++..++.++.
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA 127 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 466788877532111 11 223456778888766655444
No 269
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.75 E-value=1e-07 Score=86.88 Aligned_cols=115 Identities=13% Similarity=0.081 Sum_probs=77.0
Q ss_pred CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCeeEEEecCCChHHHHHHHhc--
Q 016047 24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
.+|++||||| ++-||.+++++|++ .|++|+++.|... .. .. .......+.+|++|+++++++++.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHH-----CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence 3589999996 67999999999999 8999988765321 10 00 012234689999999887766543
Q ss_pred -----CCCeeEEEEeccCC---------C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 94 -----LTDVTHIFYVTWTN---------R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 94 -----~~~V~h~a~~~~~~---------~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
+|.++|+|+..... . ++....+++|+.++..+.+++...-.+-.+++++|
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~is 145 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 145 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Confidence 56788887653210 1 13445689999999888887765421124566555
No 270
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.75 E-value=2.6e-07 Score=86.24 Aligned_cols=115 Identities=19% Similarity=0.065 Sum_probs=77.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC---------C-------CC-CCCCeeEEEecCCChHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-------WN-ADHLVEYVQCDVSDPEET 87 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~-------~~-~~~~v~~~~~Dl~d~~~~ 87 (396)
+|.+|||||++.||.+++++|++ .|++|++++|+... . .. ...++.++++|++|++++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGA-----AGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 58999999999999999999998 89999999987321 0 00 012466889999999887
Q ss_pred HHHHh-------cCCCeeEEE-Eecc--C--C--C----ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047 88 QAKLS-------QLTDVTHIF-YVTW--T--N--R----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG 144 (396)
Q Consensus 88 ~~~~~-------~~~~V~h~a-~~~~--~--~--~----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~ 144 (396)
+++++ .+|.++|+| +... . . . +.....+++|+.++..+++++...- ..-.+++.+||
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS 159 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD 159 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence 66554 356677776 4210 0 1 0 1234567889999888877666541 11235665553
No 271
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.74 E-value=7.1e-08 Score=90.32 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=79.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCee------EEEecCCChHHHHHHHhcCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVE------YVQCDVSDPEETQAKLSQLTD 96 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~------~~~~Dl~d~~~~~~~~~~~~~ 96 (396)
+.||+||||+|++|++++..|+..+... ++.+|+++++++..........+ ....|+....++.++++++|.
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 4589999999999999999998733221 24589999986532111100111 112344445567788999999
Q ss_pred eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 016047 97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV 139 (396)
Q Consensus 97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~ 139 (396)
|+|+|+.......+..+.++.|+.-.+.+.+.+.+++ +....+
T Consensus 82 VI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iii 125 (325)
T cd01336 82 AILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVL 125 (325)
T ss_pred EEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 9999986544444678889999999999999888874 344433
No 272
>PRK05599 hypothetical protein; Provisional
Probab=98.74 E-value=2.7e-07 Score=83.38 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=66.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh-----
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS----- 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~----- 92 (396)
|++|||||++-||..++++|.+ |++|++++|+.... .. ....+.++.+|++|++++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~------g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 74 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH------GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL 74 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC------CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence 5799999999999999999974 68999999975321 10 11247789999999987766543
Q ss_pred --cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHH
Q 016047 93 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAV 129 (396)
Q Consensus 93 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~ 129 (396)
.+|.++|+|+...... + ...+..++|+.+..+++.++
T Consensus 75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence 3566777766422111 1 12344577888876665544
No 273
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=2.2e-07 Score=84.76 Aligned_cols=115 Identities=10% Similarity=0.029 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCC-CCeeEEEecCCChHHHHHHHhc--
Q 016047 24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNAD-HLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~-~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
.+|.+|||||++ -||.+++++|.+ +|++|++..|+.... .... ....++++|++|+++++++++.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~-----~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKK-----HGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHH-----cCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence 357899999997 799999999998 899999888763110 1001 1223578999999887766543
Q ss_pred -----CCCeeEEEEeccC------CCc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 94 -----LTDVTHIFYVTWT------NRS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 94 -----~~~V~h~a~~~~~------~~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
+|.++|.++.... ..+ +....+++|+.+...+++++...-.+-.+++++|
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~is 146 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLT 146 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEe
Confidence 5667777654211 011 3456789999999988887654311113555555
No 274
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.69 E-value=3.7e-07 Score=84.65 Aligned_cols=119 Identities=16% Similarity=0.017 Sum_probs=82.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
+..++.++|||||.-||..++++|.+ +|.+|+...|+.... .....++.++++|+++.+++++..+
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~-----~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~ 106 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELAL-----RGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAE 106 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHH
Confidence 33457999999999999999999999 899999999986321 1234577889999999998876554
Q ss_pred c-------CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHH----HcccCCCcceEEEecccee
Q 016047 93 Q-------LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRA----VIPNAPNLRHVCLQTGTKH 147 (396)
Q Consensus 93 ~-------~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a----~~~~~~~~~~~~~~s~~~~ 147 (396)
. .|..++.|+....+. +..+..+.+|..|...|.+. +++.. ..|++.+||..+
T Consensus 107 ~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~--~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 107 EFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA--PSRIVNVSSILG 174 (314)
T ss_pred HHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC--CCCEEEEcCccc
Confidence 4 233444444333222 23466789999997666554 44332 267887776543
No 275
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.68 E-value=1.6e-07 Score=87.34 Aligned_cols=120 Identities=15% Similarity=0.048 Sum_probs=84.3
Q ss_pred cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCC--CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047 20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA--DHLVEYVQCDVSDPEETQAKLSQLTD 96 (396)
Q Consensus 20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~ 96 (396)
|+....+||+||||+|.||+.++..|.... ...++..+++..... ..+ +........+.+|+.++.++++++|.
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~---~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDv 79 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNP---HVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADL 79 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCE
Confidence 344444799999999999999999998522 235899999832111 000 01112334566666666788999999
Q ss_pred eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
|+++++.......+..+.+..|+..++++++++++++ +.++++++|
T Consensus 80 VVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~S 125 (321)
T PTZ00325 80 VLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVS 125 (321)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence 9999886543334678889999999999999999986 566666654
No 276
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.68 E-value=1.4e-06 Score=72.79 Aligned_cols=164 Identities=15% Similarity=0.128 Sum_probs=103.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~---- 93 (396)
|.+..+||||+.-||++++..|.+ .|++|.+.+++.... +.....-..+.||++++++++..++.
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~-----~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAK-----KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHh-----cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 567899999999999999999999 899999999875432 22222345789999999876654433
Q ss_pred ---CCCeeEEEEeccC------CCccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeecccccccccCCC
Q 016047 94 ---LTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 94 ---~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
.+.+++||+.... .++++++.+.+|+.|+-.+.+++.+. ..+...++-+||...-.+ .+|.
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG---N~GQ--- 161 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG---NFGQ--- 161 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc---cccc---
Confidence 3458888775432 23378889999999998887776665 222335555554322111 1221
Q ss_pred CCCCccCCCCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 161 YDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
..+. ...... -+..|...+.. ...++++-++-|+.|--
T Consensus 162 --tnYA----AsK~Gv--IgftktaArEl-a~knIrvN~VlPGFI~t 199 (256)
T KOG1200|consen 162 --TNYA----ASKGGV--IGFTKTAAREL-ARKNIRVNVVLPGFIAT 199 (256)
T ss_pred --hhhh----hhcCce--eeeeHHHHHHH-hhcCceEeEeccccccC
Confidence 0000 000001 12244444444 45679999999888877
No 277
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.66 E-value=4.4e-08 Score=83.42 Aligned_cols=89 Identities=16% Similarity=0.081 Sum_probs=64.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcC----C
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL----T 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~----~ 95 (396)
|+++|||||||+|. +++.|.+ .|++|++++|++... ......+.++.+|+.|++++.++++.+ .
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~-----~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCE-----KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHH-----CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999999876 9999999 899999999975321 111246788899999999888777653 2
Q ss_pred CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047 96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 133 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 133 (396)
.+..++. .+++.+++++..+|++.+
T Consensus 75 ~id~lv~-------------~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 75 PFDLAVA-------------WIHSSAKDALSVVCRELD 99 (177)
T ss_pred CCeEEEE-------------eccccchhhHHHHHHHHc
Confidence 2222222 234456778999999886
No 278
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.65 E-value=2.3e-07 Score=79.68 Aligned_cols=112 Identities=30% Similarity=0.294 Sum_probs=76.1
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC-CCC---------CCCCCeeEEEecCCChHHHHHHHhcC--
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK-PNW---------NADHLVEYVQCDVSDPEETQAKLSQL-- 94 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~-- 94 (396)
++|||||+|-||..+++.|.++ ...+|+++.|++. ... .....+.++.+|++|++++.+++..+
T Consensus 2 tylitGG~gglg~~la~~La~~----~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~ 77 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAER----GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ 77 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT----T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred EEEEECCccHHHHHHHHHHHHc----CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence 6899999999999999999983 2337999999832 110 01246789999999999999988764
Q ss_pred -----CCeeEEEEeccC---CCc---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 95 -----TDVTHIFYVTWT---NRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 95 -----~~V~h~a~~~~~---~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
+.|||+++.... ... .....+..-+.|+.+|.++.... .+.+++..||
T Consensus 78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SS 136 (181)
T PF08659_consen 78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSS 136 (181)
T ss_dssp TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEE
T ss_pred ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECC
Confidence 349999875321 111 34556788999999999988864 4777776664
No 279
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.64 E-value=6e-08 Score=81.98 Aligned_cols=112 Identities=18% Similarity=0.219 Sum_probs=80.7
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCC--CCCC------CC-CCCCeeEEEecCCChHHHHHHHhc--
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARR--PKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~--~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
|++|||||+|-||..++++|++ + ++.|+++.|+ .... .. ...++.++++|++++++++++++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~-----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR-----RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----cCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 5899999999999999999998 5 5678888887 1110 00 225788999999999887766654
Q ss_pred -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
+|.++|+++...... +.....+.+|+.+...+.+++... +-.+++++||
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~g~iv~~sS 135 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ--GGGKIVNISS 135 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH--TTEEEEEEEE
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehheec--cccceEEecc
Confidence 455777766433111 134567899999999999988872 3566666654
No 280
>PLN00015 protochlorophyllide reductase
Probab=98.64 E-value=1.2e-07 Score=88.68 Aligned_cols=115 Identities=11% Similarity=0.056 Sum_probs=79.5
Q ss_pred EEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047 29 LIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-------Q 93 (396)
Q Consensus 29 LVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (396)
|||||++.||.+++++|++ +| ++|++++|+.... . .....+.++.+|++|.+++++++. .
T Consensus 1 lITGas~GIG~aia~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAE-----TGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 6999999999999999998 79 9999999875321 1 112357788999999988766554 3
Q ss_pred CCCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCC--cceEEEeccceee
Q 016047 94 LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APN--LRHVCLQTGTKHY 148 (396)
Q Consensus 94 ~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~--~~~~~~~s~~~~y 148 (396)
+|.++|+|+..... . +.....+++|+.|+..+++++... ..+ -.+++++||...+
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 56788887643211 1 134567899999987776655443 111 2467777765443
No 281
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.59 E-value=2.9e-07 Score=77.94 Aligned_cols=102 Identities=24% Similarity=0.231 Sum_probs=73.0
Q ss_pred CCEEEEEcC-CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--CCCCCCCeeEEEecCCChHHHHHHHhcC-------
Q 016047 25 QSVALIVGV-TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLSQL------- 94 (396)
Q Consensus 25 ~~~iLVtGa-tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~------- 94 (396)
+++|||||. .|-||.+|++++.+ +||.|++..|+-+. .+..+.++...+.|+++++++.+....+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~-----~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFAR-----NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHh-----CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 478999986 79999999999999 89999999997543 2222457889999999999876655432
Q ss_pred -CCeeEEEEeccC--CCc----cHHHHHHhHHHHHHHHHHHHcc
Q 016047 95 -TDVTHIFYVTWT--NRS----TEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 95 -~~V~h~a~~~~~--~~~----~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
|..++.|+..-. ..+ .-...+++|+.|..++.++...
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h 125 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH 125 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence 234444443221 111 3456789999998887776653
No 282
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.55 E-value=8.7e-07 Score=79.75 Aligned_cols=159 Identities=18% Similarity=0.094 Sum_probs=103.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHhcC--
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL-- 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~~~-- 94 (396)
++|+|||++--+|..++..+.. +|++|+++.|..... +. ....+.+..+|+.|-+++...+...
T Consensus 34 ~hi~itggS~glgl~la~e~~~-----~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKR-----EGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHH-----ccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 6999999999999999999999 899999999975421 11 1123668889999888777666554
Q ss_pred -----CCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHcccCCCcc---eEEEeccceeecccccccccCCC
Q 016047 95 -----TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLR---HVCLQTGTKHYLGPFEAFGKIKP 160 (396)
Q Consensus 95 -----~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~---~~~~~s~~~~y~ss~~~~g~~~~ 160 (396)
|.+++||+.+.... + .-....++|..|+.|++.++..+.+... +++.++|...- ...||..
T Consensus 109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~---~~i~Gys-- 183 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM---LGIYGYS-- 183 (331)
T ss_pred ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh---cCccccc--
Confidence 45888877543321 1 2345679999999999987776532223 67766542211 1133321
Q ss_pred CCCCccCCCCCCCCCCcchhH---HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 161 YDPPFTEDMPRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 161 ~~~p~~E~~p~~~~~~~~y~~---e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
+.+...++. -..+++.+ ...++.++..-|+.+--
T Consensus 184 ------------aYs~sK~alrgLa~~l~qE~-i~~~v~Vt~~~P~~~~t 220 (331)
T KOG1210|consen 184 ------------AYSPSKFALRGLAEALRQEL-IKYGVHVTLYYPPDTLT 220 (331)
T ss_pred ------------ccccHHHHHHHHHHHHHHHH-hhcceEEEEEcCCCCCC
Confidence 111122332 33344333 44589999888887776
No 283
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.54 E-value=1.9e-06 Score=73.87 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=68.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC-CCCC-------CCCCCCeeEEEecCCChHHHHHHHhcC---
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPN-------WNADHLVEYVQCDVSDPEETQAKLSQL--- 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~-~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~--- 94 (396)
+.|+||||+.-||-.|+++|++. .|.++++-.++ ++.. ...++++++++.|+++.+++.++.+.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~----~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKD----KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcC----CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 67999999999999999999986 56776666654 5431 113689999999999998887766543
Q ss_pred ------CCeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHH
Q 016047 95 ------TDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAV 129 (396)
Q Consensus 95 ------~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~ 129 (396)
+..++.|+..-.... .....+++|..|+..+.+++
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~ 127 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF 127 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence 335555554222111 23456799998876655443
No 284
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.54 E-value=1.5e-06 Score=78.35 Aligned_cols=160 Identities=17% Similarity=0.137 Sum_probs=101.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcC----
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL---- 94 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~---- 94 (396)
.+|-|||||.---+|..|+++|.+ +|+.|++-.-.++.. ....++...++.|++++++++++.+-+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~-----~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDK-----KGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHh-----cCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 347899999976679999999999 899999888544321 112467888999999999998876532
Q ss_pred --C---CeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCC
Q 016047 95 --T---DVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPY 161 (396)
Q Consensus 95 --~---~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~ 161 (396)
+ .|+|.|+......+ +.....++|+.|+..+..+.... .+.-.|++.+|| +-|..
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS---------~~GR~--- 170 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSS---------VLGRV--- 170 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecc---------cccCc---
Confidence 1 38888774322221 55677899999976665544433 111234555543 33321
Q ss_pred CCCccCCCCCCCCCCcchhHH---HHHHHHhhcCCCeeEEEEcCCceee
Q 016047 162 DPPFTEDMPRLDAPNFYYTLE---DILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 162 ~~p~~E~~p~~~~~~~~y~~e---~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
..|. ..|...+.|+.| +.++... ..+|+++.++-|| ++-
T Consensus 171 ~~p~-----~g~Y~~SK~aVeaf~D~lR~EL-~~fGV~VsiiePG-~f~ 212 (322)
T KOG1610|consen 171 ALPA-----LGPYCVSKFAVEAFSDSLRREL-RPFGVKVSIIEPG-FFK 212 (322)
T ss_pred cCcc-----cccchhhHHHHHHHHHHHHHHH-HhcCcEEEEeccC-ccc
Confidence 1110 123334445543 3344443 6789999999999 444
No 285
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.51 E-value=3.8e-07 Score=82.15 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=71.4
Q ss_pred HHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc----CCCeeEEEEeccCCCccHHHHHH
Q 016047 41 LAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LTDVTHIFYVTWTNRSTEAENCK 116 (396)
Q Consensus 41 l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~~~V~h~a~~~~~~~~~~~~~~~ 116 (396)
++++|++ +|++|++++|+.... ...+++++|++|.++++++++. +|.|+|+|+.. ...+....++
T Consensus 1 ~a~~l~~-----~G~~Vv~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~--~~~~~~~~~~ 69 (241)
T PRK12428 1 TARLLRF-----LGARVIGVDRREPGM----TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP--GTAPVELVAR 69 (241)
T ss_pred ChHHHHh-----CCCEEEEEeCCcchh----hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC--CCCCHHHhhh
Confidence 4677887 899999999986542 1245789999999998887764 67788887643 2235677899
Q ss_pred hHHHHHHHHHHHHcccCCCcceEEEeccceee
Q 016047 117 INGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 148 (396)
Q Consensus 117 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y 148 (396)
+|+.++.++++++.+.-.+-.+++++||...|
T Consensus 70 vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 70 VNFLGLRHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred hchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 99999999999887642122577777765544
No 286
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.49 E-value=3.1e-06 Score=76.04 Aligned_cols=122 Identities=16% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHh---
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
+..++.||||||.+-+|+.++.++.+ +|..+.+.+.+...... ...+++.+.||++|.+++....+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~-----rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAK-----RGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHH-----hCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence 44568999999999999999999999 78888888887654210 11257899999999987654433
Q ss_pred ----cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceee
Q 016047 93 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY 148 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y 148 (396)
.++.+++.|+...... + .-+..+++|+.|.-...++-... ..+--|++.++|...+
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL 177 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence 3455777766543221 1 23456899999965554443322 1134577777654433
No 287
>PLN00106 malate dehydrogenase
Probab=98.47 E-value=1e-06 Score=82.04 Aligned_cols=108 Identities=14% Similarity=0.070 Sum_probs=77.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCC--CCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA--DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
++||+||||+|.||+.++..|.... ...++.++++.+... ..+ +........++.+.+++.+++.++|.|+|+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~---~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP---LVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 4699999999999999999998632 123799999866211 000 0011122334444555778899999999998
Q ss_pred EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047 102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 135 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 135 (396)
+....+..+..+....|+..++++.+.+++++++
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~ 128 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPN 128 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8654444467888999999999999999998743
No 288
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.43 E-value=3.5e-06 Score=72.36 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--------CCCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--------NWNADHLVEYVQCDVSDPEETQAKLSQ-- 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------~~~~~~~v~~~~~Dl~d~~~~~~~~~~-- 93 (396)
.+|++++||+.|-||..++++|++ +|..+.+++.+.+. +..+...+-|+++|+++..+++++++.
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~-----kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLE-----KGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHH-----cCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence 368999999999999999999999 78887777655332 123345778999999999888777665
Q ss_pred --CCCeeEEEEeccCCCc-cHHHHHHhHHHHH----HHHHHHHccc
Q 016047 94 --LTDVTHIFYVTWTNRS-TEAENCKINGSMF----RNVLRAVIPN 132 (396)
Q Consensus 94 --~~~V~h~a~~~~~~~~-~~~~~~~~nv~gt----~~ll~a~~~~ 132 (396)
...|.-+...+....+ +.+....+|+.|. ...|.+..+.
T Consensus 79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~ 124 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKK 124 (261)
T ss_pred HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhh
Confidence 2334444433444333 5666778887764 4455555544
No 289
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.43 E-value=6.4e-06 Score=75.15 Aligned_cols=159 Identities=15% Similarity=0.034 Sum_probs=102.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHH-
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL- 91 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~- 91 (396)
..+|.+|||||+.-||.+++++|.+ .|.+|++..|+.... .....++..+.+|+++.++.++++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~-----~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAK-----AGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 3468999999999999999999999 899999999986431 111346789999999886544332
Q ss_pred -------hcCCCeeEEEEeccCCCc-------cHHHHHHhHHHH-HHHHHHHHccc--CCCcceEEEeccceeecccccc
Q 016047 92 -------SQLTDVTHIFYVTWTNRS-------TEAENCKINGSM-FRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA 154 (396)
Q Consensus 92 -------~~~~~V~h~a~~~~~~~~-------~~~~~~~~nv~g-t~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~ 154 (396)
..+|.+++.|+....... .++..+++|+.| +.++..++..+ ..+--.++++|+...+...
T Consensus 81 ~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~--- 157 (270)
T KOG0725|consen 81 FAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG--- 157 (270)
T ss_pred HHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC---
Confidence 336777777775442211 456778999995 66666666655 2223455555533222110
Q ss_pred cccCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047 155 FGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
.+.+ .+|+. .+-+.... ...|+++-.+-|+.|..+
T Consensus 158 -----------------~~~~-~~Y~~sK~al~~ltr~lA~El-~~~gIRvN~v~PG~i~T~ 200 (270)
T KOG0725|consen 158 -----------------PGSG-VAYGVSKAALLQLTRSLAKEL-AKHGIRVNSVSPGLVKTS 200 (270)
T ss_pred -----------------CCCc-ccchhHHHHHHHHHHHHHHHH-hhcCcEEEEeecCcEeCC
Confidence 0101 22443 22222222 467899999999988884
No 290
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.41 E-value=3.7e-06 Score=71.03 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=103.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------QL 94 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~ 94 (396)
+.+||||||+.-||..|++++.+ .|-+|++..|+.... ....+.+.-..||+.|.++.++.++ ..
T Consensus 5 gnTiLITGG~sGIGl~lak~f~e-----lgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLE-----LGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHH-----hCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 46899999999999999999999 788999999986321 1133678889999999986555443 24
Q ss_pred CCeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047 95 TDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP 164 (396)
Q Consensus 95 ~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p 164 (396)
+.++++|+.-... .+ +..+..++|+.++.+|..+...+ ..+---++-+|| -.+.. |
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSS---------GLafv-----P 145 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS---------GLAFV-----P 145 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecc---------ccccC-----c
Confidence 5588887742211 11 23455789999998887776655 111223443432 22211 1
Q ss_pred ccCCCCCCCCCCc-chhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047 165 FTEDMPRLDAPNF-YYTLEDILFEEVEKKEELSWSVHRPDTIFG 207 (396)
Q Consensus 165 ~~E~~p~~~~~~~-~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G 207 (396)
.+..|.++.... ..+....|++.. +..++.+.-+-|+.|--
T Consensus 146 -m~~~PvYcaTKAaiHsyt~aLR~Ql-k~t~veVIE~~PP~V~t 187 (245)
T COG3967 146 -MASTPVYCATKAAIHSYTLALREQL-KDTSVEVIELAPPLVDT 187 (245)
T ss_pred -ccccccchhhHHHHHHHHHHHHHHh-hhcceEEEEecCCceec
Confidence 223333222110 011366677766 77789999998888766
No 291
>PRK09620 hypothetical protein; Provisional
Probab=98.36 E-value=7.3e-07 Score=79.03 Aligned_cols=74 Identities=14% Similarity=0.024 Sum_probs=52.2
Q ss_pred CCEEEEEcCC----------------ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChH
Q 016047 25 QSVALIVGVT----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPE 85 (396)
Q Consensus 25 ~~~iLVtGat----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~ 85 (396)
+|+||||+|. ||+|++|+++|++ +|++|+++++..... ......+..+.+|....+
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~-----~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~ 77 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELIS-----KGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQD 77 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHH-----CCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHH
Confidence 5899999886 9999999999999 899999998643211 111112334555333335
Q ss_pred HHHHHHh--cCCCeeEEEEe
Q 016047 86 ETQAKLS--QLTDVTHIFYV 103 (396)
Q Consensus 86 ~~~~~~~--~~~~V~h~a~~ 103 (396)
.+.+.+. ++|.|+|+|+.
T Consensus 78 ~l~~~~~~~~~D~VIH~AAv 97 (229)
T PRK09620 78 KMKSIITHEKVDAVIMAAAG 97 (229)
T ss_pred HHHHHhcccCCCEEEECccc
Confidence 6777774 57889999885
No 292
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.33 E-value=2.1e-06 Score=76.41 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=50.9
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh--HHHHHHHhcCCCeeEEEEec
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT 104 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~~~~~V~h~a~~~ 104 (396)
++=-.+|||+|++|+++|++ +|++|+++.|..........+++++.++-.+. +.+.+.+.++|.|+|+|+.+
T Consensus 19 ~itN~SSG~iG~aLA~~L~~-----~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs 92 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLA-----AGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS 92 (229)
T ss_pred eecCccchHHHHHHHHHHHh-----CCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence 33335699999999999999 89999999976432111124677777654332 45666777889999998854
No 293
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.32 E-value=9.4e-06 Score=93.52 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC------------------------------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN------------------------------ 69 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~------------------------------ 69 (396)
.++.+|||||+|-||..++++|.+. .|.+|+++.|++.. .|.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~----~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQ----CQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHh----cCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 4689999999999999999999982 36899999997210 000
Q ss_pred --------------------CCCCeeEEEecCCChHHHHHHHhc------CCCeeEEEEeccCC---C---ccHHHHHHh
Q 016047 70 --------------------ADHLVEYVQCDVSDPEETQAKLSQ------LTDVTHIFYVTWTN---R---STEAENCKI 117 (396)
Q Consensus 70 --------------------~~~~v~~~~~Dl~d~~~~~~~~~~------~~~V~h~a~~~~~~---~---~~~~~~~~~ 117 (396)
....+.++.+|++|.+++.+++.. +|.|+|.|+..... . ++....+++
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence 012467899999999888766653 57799988753321 1 145678999
Q ss_pred HHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 118 NGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 118 nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
|+.|+.++++++.... .++++++||
T Consensus 2152 nv~G~~~Ll~al~~~~--~~~IV~~SS 2176 (2582)
T TIGR02813 2152 KVDGLLSLLAALNAEN--IKLLALFSS 2176 (2582)
T ss_pred HHHHHHHHHHHHHHhC--CCeEEEEec
Confidence 9999999999987642 456666654
No 294
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.29 E-value=8.8e-06 Score=73.57 Aligned_cols=115 Identities=19% Similarity=0.150 Sum_probs=78.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C--CCC----CCeeEEEecCCC-hHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NAD----HLVEYVQCDVSD-PEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~----~~v~~~~~Dl~d-~~~~~~~~~ 92 (396)
++++||||||++-||..+++.|.+ +|+.|+++.|+.... . ... ..+.+..+|+++ .++++.++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~ 78 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAR-----EGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVA 78 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHH
Confidence 458999999999999999999997 899988888875421 0 011 256678899998 766554433
Q ss_pred -------cCCCeeEEEEeccC--C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 93 -------QLTDVTHIFYVTWT--N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 93 -------~~~~V~h~a~~~~~--~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
.+|.++++|+.... . . +.....+++|+.|...+.+++..... -++++.+||
T Consensus 79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS 143 (251)
T COG1028 79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISS 143 (251)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECC
Confidence 26667777664321 1 1 14566789999999888885554421 116776653
No 295
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.28 E-value=1.8e-05 Score=73.47 Aligned_cols=115 Identities=15% Similarity=0.046 Sum_probs=72.5
Q ss_pred CCCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C----------CCC----CCeeEEEec
Q 016047 23 SYQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W----------NAD----HLVEYVQCD 80 (396)
Q Consensus 23 ~~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~----------~~~----~~v~~~~~D 80 (396)
.++|.+||||| +.-||.++++.|.+ .|.+|++ .|..... . ... .....+.+|
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~-----~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 80 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAA-----AGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD 80 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence 45789999999 79999999999999 8999887 4431100 0 000 113567888
Q ss_pred C--CChH------------------HHHHHHh-------cCCCeeEEEEecc---CC---C--ccHHHHHHhHHHHHHHH
Q 016047 81 V--SDPE------------------ETQAKLS-------QLTDVTHIFYVTW---TN---R--STEAENCKINGSMFRNV 125 (396)
Q Consensus 81 l--~d~~------------------~~~~~~~-------~~~~V~h~a~~~~---~~---~--~~~~~~~~~nv~gt~~l 125 (396)
+ .+++ +++++++ .+|.++|+|+... .. . ++....+++|+.++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l 160 (303)
T PLN02730 81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL 160 (303)
T ss_pred eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 8 3222 4444332 3677888875311 11 1 14566789999999998
Q ss_pred HHHHcccCCCcceEEEec
Q 016047 126 LRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 126 l~a~~~~~~~~~~~~~~s 143 (396)
++++...-.+--+++++|
T Consensus 161 ~~~~~p~m~~~G~II~is 178 (303)
T PLN02730 161 LQHFGPIMNPGGASISLT 178 (303)
T ss_pred HHHHHHHHhcCCEEEEEe
Confidence 887766411114566555
No 296
>PRK06720 hypothetical protein; Provisional
Probab=98.28 E-value=3e-06 Score=71.74 Aligned_cols=76 Identities=17% Similarity=0.071 Sum_probs=57.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHH------
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL------ 91 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~------ 91 (396)
++.++||||+|.||..+++.|.+ .|++|++++|+.... . .....+.++.+|+++.+++.+++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~-----~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAK-----QGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57999999999999999999998 799999999875321 0 01234668899999998776644
Q ss_pred -hcCCCeeEEEEecc
Q 016047 92 -SQLTDVTHIFYVTW 105 (396)
Q Consensus 92 -~~~~~V~h~a~~~~ 105 (396)
..+|.++|+|+...
T Consensus 91 ~G~iDilVnnAG~~~ 105 (169)
T PRK06720 91 FSRIDMLFQNAGLYK 105 (169)
T ss_pred cCCCCEEEECCCcCC
Confidence 34677888877533
No 297
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.28 E-value=6.4e-06 Score=77.05 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=78.2
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-----------HHHHHHHhc
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKLSQ 93 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~~~~~~~~ 93 (396)
||.||||+|++|+.++..|...+-.. ..++++.++++... +..+....|+.|. ....+.+++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~ 76 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALEGVVMELQDCAFPLLKGVVITTDPEEAFKD 76 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----CccceeeeehhhhcccccCCcEEecChHHHhCC
Confidence 79999999999999999998632221 12358888886521 1223344454443 345678999
Q ss_pred CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 016047 94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC 140 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~ 140 (396)
+|.|+|+|+....+..+..+.+..|+.-.+.+.+.+.+.+ ++.+.++
T Consensus 77 aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv 124 (323)
T cd00704 77 VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV 124 (323)
T ss_pred CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999999886554445788899999999999999999884 6554443
No 298
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.19 E-value=2.9e-06 Score=80.15 Aligned_cols=86 Identities=22% Similarity=0.152 Sum_probs=68.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
++|||.|| |+||+.++..|.+ +| ++|++.+|.+.+. .....+++.+++|+.|.+++.+++++.|.|+++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~-----~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQ-----NGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINA 75 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence 68999997 9999999999998 45 7999999986432 112248999999999999999999999989998
Q ss_pred EEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047 101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 133 (396)
Q Consensus 101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 133 (396)
+-.. . ..+++++|.+.+
T Consensus 76 ~p~~-------~---------~~~i~ka~i~~g 92 (389)
T COG1748 76 APPF-------V---------DLTILKACIKTG 92 (389)
T ss_pred CCch-------h---------hHHHHHHHHHhC
Confidence 5321 0 115788998875
No 299
>PRK05086 malate dehydrogenase; Provisional
Probab=98.14 E-value=1.9e-05 Score=73.66 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=75.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCC-CCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~-~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
|||+|+||||.+|++++..|..... .++++++++|++.... ..+ +....+.+ .+.+++.+.++++|.|+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~--~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLP--AGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC--CccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence 5899999999999999988743100 3568888888643210 011 11122333 2233455678899988888
Q ss_pred EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047 101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT 143 (396)
Q Consensus 101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s 143 (396)
++.......+..+.+..|...++++++++++++ +..++.+.
T Consensus 77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~--~~~ivivv 117 (312)
T PRK05086 77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC--PKACIGII 117 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEc
Confidence 775444334678889999999999999999986 44455443
No 300
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.10 E-value=1.7e-05 Score=74.24 Aligned_cols=108 Identities=14% Similarity=0.153 Sum_probs=75.7
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH-----------HHHHHHhc
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE-----------ETQAKLSQ 93 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~-----------~~~~~~~~ 93 (396)
+|.|+||+|.+|+.++..|....... ..++++.+++.+... ..+....|+.|.. +..+.+.+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~ 75 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTD 75 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccceeEeehhcccchhcCceeccCChHHHhCC
Confidence 58999999999999999998632211 123588888864321 2233445555443 34578899
Q ss_pred CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 016047 94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV 139 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~ 139 (396)
+|.|+|+|+.......+..+....|+.-.+.+.+.+.+++ +..+.+
T Consensus 76 aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii 122 (324)
T TIGR01758 76 VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL 122 (324)
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 9999999886544334578889999999999999999874 544333
No 301
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.08 E-value=0.0001 Score=68.44 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=30.5
Q ss_pred CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
++|.+|||||+ .-||.+++++|.+ +|++|++.+|.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~-----~Ga~Vvv~~~~ 43 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAE-----AGATILVGTWV 43 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHH-----CCCEEEEEecc
Confidence 46899999995 8899999999999 89999887643
No 302
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.05 E-value=2.5e-05 Score=70.40 Aligned_cols=94 Identities=13% Similarity=0.027 Sum_probs=66.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY 102 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~ 102 (396)
|+|||+||||. |+.|++.|.+ .||+|++.++..... .....+...+..+..|.+++.+.++. ++.|++..|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~-----~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIA-----QGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 48999999999 9999999998 799999999876432 11122234556777888888888876 555777744
Q ss_pred eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047 103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 138 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~ 138 (396)
. . -..-++|+.++|++.+....+
T Consensus 75 P---f----------A~~is~~a~~a~~~~~ipylR 97 (256)
T TIGR00715 75 P---F----------AAQITTNATAVCKELGIPYVR 97 (256)
T ss_pred H---H----------HHHHHHHHHHHHHHhCCcEEE
Confidence 2 1 114566788999988643333
No 303
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.98 E-value=1.8e-05 Score=73.94 Aligned_cols=159 Identities=12% Similarity=0.040 Sum_probs=94.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-------EEEEEeCCCCC--C------C-----CCCCCeeEEEecCCCh
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKP--N------W-----NADHLVEYVQCDVSDP 84 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~------~-----~~~~~v~~~~~Dl~d~ 84 (396)
++||.|+||+|++|+.++..|+. ++. +++.++..... . . ....++++ .
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~-- 69 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T-- 69 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--
Confidence 46999999999999999999986 333 68888875322 1 0 00011111 1
Q ss_pred HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccCCCCCC
Q 016047 85 EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDP 163 (396)
Q Consensus 85 ~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~ 163 (396)
....+.++++|.|+.+|+....+..+..+.+..|+.-.+.+.+.+.++++ ..+. +.+|- +..+.. .
T Consensus 70 ~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~ii-ivvsN------PvD~~t------~ 136 (322)
T cd01338 70 DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKV-LVVGN------PCNTNA------L 136 (322)
T ss_pred cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEE-EEecC------cHHHHH------H
Confidence 11246789999988888764444446788899999999999999998873 4443 32221 000000 0
Q ss_pred CccCCCCCCC-CCCcc---hhHHHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047 164 PFTEDMPRLD-APNFY---YTLEDILFEEVEKKEELSWSVHRPDTIFGFS 209 (396)
Q Consensus 164 p~~E~~p~~~-~~~~~---y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~ 209 (396)
-.....+..| ...+. ...+++.... ++..+++...+|...|||..
T Consensus 137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~l-a~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQL-AKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred HHHHHcCCCChHheEEehHHHHHHHHHHH-HHHhCcChhHeEEEEEEeCC
Confidence 0011111111 11211 1224444333 46778999999988999943
No 304
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.83 E-value=3.4e-05 Score=69.40 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=93.8
Q ss_pred cCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHH--------hcCC
Q 016047 32 GVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKL--------SQLT 95 (396)
Q Consensus 32 Gat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~--------~~~~ 95 (396)
|++ +-||..++++|++ .|++|++++|+.... .....+.+++.+|+++++++++++ ..+|
T Consensus 1 g~~~s~GiG~aia~~l~~-----~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAE-----EGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHH-----TTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred CCCCCCChHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence 666 9999999999999 899999999986531 001123457999999998776653 4467
Q ss_pred CeeEEEEeccC---CCc-------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047 96 DVTHIFYVTWT---NRS-------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF 165 (396)
Q Consensus 96 ~V~h~a~~~~~---~~~-------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~ 165 (396)
.++|+++.... ..+ .....+++|+.++..+++++.+.-.+-..++++|+.. + ..+
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~---------~-----~~~- 140 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA---------A-----QRP- 140 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG---------G-----TSB-
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh---------h-----ccc-
Confidence 78888875443 111 3456789999999999888865411123445444211 1 011
Q ss_pred cCCCCCCCCCCcchhH--------HHHHHHHhhcC-CCeeEEEEcCCceee
Q 016047 166 TEDMPRLDAPNFYYTL--------EDILFEEVEKK-EELSWSVHRPDTIFG 207 (396)
Q Consensus 166 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~-~~~~~~ilRp~~v~G 207 (396)
.+... .|+. .+.+...+ .. .|+++-.|.|+.|-.
T Consensus 141 ------~~~~~-~y~~sKaal~~l~r~lA~el-~~~~gIrVN~V~pG~i~t 183 (241)
T PF13561_consen 141 ------MPGYS-AYSASKAALEGLTRSLAKEL-APKKGIRVNAVSPGPIET 183 (241)
T ss_dssp ------STTTH-HHHHHHHHHHHHHHHHHHHH-GGHGTEEEEEEEESSBSS
T ss_pred ------Cccch-hhHHHHHHHHHHHHHHHHHh-ccccCeeeeeecccceec
Confidence 01111 2542 23333333 45 789999999988876
No 305
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.77 E-value=4.1e-05 Score=63.00 Aligned_cols=103 Identities=17% Similarity=0.070 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCC-CCeeEEEecCCChHHHHHHHhcCC---C
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNAD-HLVEYVQCDVSDPEETQAKLSQLT---D 96 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~-~~v~~~~~Dl~d~~~~~~~~~~~~---~ 96 (396)
.++.||+||+.--||+.++..|.+ .|.+|+++.|.+... .... .-+..+.+|+.+-+.+.+++..+- .
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~-----aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg 80 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAK-----AGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG 80 (245)
T ss_pred cceEEEeecccccccHHHHHHHHh-----cCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence 457899999999999999999999 799999999987432 1112 348889999999888888877643 3
Q ss_pred eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047 97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP 131 (396)
Q Consensus 97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~ 131 (396)
.++.|+.+-.+. .+.+..|++|+.+..++.+...+
T Consensus 81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var 121 (245)
T KOG1207|consen 81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVAR 121 (245)
T ss_pred hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHH
Confidence 555555433221 13345678999998777665443
No 306
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.75 E-value=7.6e-05 Score=67.51 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=99.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCC--CCeeEEEecCCChHH----HHHH
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNAD--HLVEYVQCDVSDPEE----TQAK 90 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~--~~v~~~~~Dl~d~~~----~~~~ 90 (396)
++++=..|||||.-||+..+++|.+ +|++|+.++|..++. .... -.+.++..|.++++. +.+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-----rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-----RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence 4556789999999999999999999 899999999986432 1111 246789999988764 6666
Q ss_pred HhcCCC--eeEEEEeccCCCc-----cH---HHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047 91 LSQLTD--VTHIFYVTWTNRS-----TE---AENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI 158 (396)
Q Consensus 91 ~~~~~~--V~h~a~~~~~~~~-----~~---~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~ 158 (396)
+.+.|. ++++++..+.... +. .....+|+.++..+.+..... .++--.++.++| + -|
T Consensus 122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS------~---ag-- 190 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGS------F---AG-- 190 (312)
T ss_pred hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecc------c---cc--
Confidence 777775 7777776553322 11 334578888876665544433 111223443331 1 11
Q ss_pred CCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047 159 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF 208 (396)
Q Consensus 159 ~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~ 208 (396)
-.|. |. -..|+. .+.|.+.+ +..|+.+-.+-|..|...
T Consensus 191 ---~~p~-------p~-~s~ysasK~~v~~~S~~L~~Ey-~~~gI~Vq~v~p~~VaTk 236 (312)
T KOG1014|consen 191 ---LIPT-------PL-LSVYSASKAFVDFFSRCLQKEY-ESKGIFVQSVIPYLVATK 236 (312)
T ss_pred ---cccC-------hh-HHHHHHHHHHHHHHHHHHHHHH-HhcCeEEEEeehhheecc
Confidence 1111 11 112443 44555555 677899999988888873
No 307
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.72 E-value=5.5e-05 Score=65.69 Aligned_cols=72 Identities=22% Similarity=0.136 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
.+++++|+||+|.+|+.+++.|.+ .|++|++++|+.... .....+.++..+|..+.+++.++++++|.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~-----~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAR-----EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence 457999999999999999999998 788999999975321 111124456678889999888999999977
Q ss_pred eEE
Q 016047 98 THI 100 (396)
Q Consensus 98 ~h~ 100 (396)
++.
T Consensus 102 i~a 104 (194)
T cd01078 102 FAA 104 (194)
T ss_pred EEC
Confidence 765
No 308
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.64 E-value=6.2e-05 Score=61.64 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=72.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (396)
+||.|+||+|.+|++++..|...+. ..+++.++++.... .+......+..+| .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l---~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL---ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT---SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---CCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccc
Confidence 5899999999999999999987432 34899999874321 0111122232322 2457788
Q ss_pred CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
|.|+-.++....+..+..+.++.|..-.+.+.+.+.+.+++...++
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~viv 116 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIV 116 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence 8777776644333446788899999999999999999876554333
No 309
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.62 E-value=0.00016 Score=69.59 Aligned_cols=72 Identities=18% Similarity=0.005 Sum_probs=55.5
Q ss_pred CCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHH
Q 016047 23 SYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86 (396)
Q Consensus 23 ~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~ 86 (396)
..+++|||||| +|.+|.+++++|.+ +|++|+++++...... ..+ +..+|+.+.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~-----~Ga~V~~v~~~~~~~~--~~~--~~~~dv~~~~~ 256 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAAR-----RGADVTLVSGPVNLPT--PAG--VKRIDVESAQE 256 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHH-----CCCEEEEeCCCccccC--CCC--cEEEccCCHHH
Confidence 35689999999 99999999999999 8999999998653211 122 45689999877
Q ss_pred HHHHH----hcCCCeeEEEEe
Q 016047 87 TQAKL----SQLTDVTHIFYV 103 (396)
Q Consensus 87 ~~~~~----~~~~~V~h~a~~ 103 (396)
+.+++ ..+|.++|+|+.
T Consensus 257 ~~~~v~~~~~~~DilI~~Aav 277 (399)
T PRK05579 257 MLDAVLAALPQADIFIMAAAV 277 (399)
T ss_pred HHHHHHHhcCCCCEEEEcccc
Confidence 76655 346778888775
No 310
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.61 E-value=8.9e-05 Score=71.68 Aligned_cols=70 Identities=33% Similarity=0.423 Sum_probs=53.6
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
|+|.|| |++|+.+++.|.+. ..+ +|++.+|+.... .....+++.+++|+.|.+++.++++++|.|++|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~----~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARR----GPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA 75 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCT----TCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred CEEEcC-cHHHHHHHHHHhcC----CCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence 799999 99999999999984 345 899999986431 1133689999999999999999999999999995
Q ss_pred E
Q 016047 102 Y 102 (396)
Q Consensus 102 ~ 102 (396)
.
T Consensus 76 g 76 (386)
T PF03435_consen 76 G 76 (386)
T ss_dssp S
T ss_pred c
Confidence 5
No 311
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.57 E-value=3.1e-05 Score=72.35 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
.+++|+||||+|+||+.++++|.+. .| .+|+.+.|........ ..++..+|+. ++.+++.++|.|+|+++
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~----~gv~~lilv~R~~~rl~~L--a~el~~~~i~---~l~~~l~~aDiVv~~ts 224 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAK----TGVAELLLVARQQERLQEL--QAELGGGKIL---SLEEALPEADIVVWVAS 224 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhh----CCCCEEEEEcCCHHHHHHH--HHHhccccHH---hHHHHHccCCEEEECCc
Confidence 4589999999999999999999852 23 4788888864322100 0112234443 46688899999999976
Q ss_pred e
Q 016047 103 V 103 (396)
Q Consensus 103 ~ 103 (396)
.
T Consensus 225 ~ 225 (340)
T PRK14982 225 M 225 (340)
T ss_pred C
Confidence 4
No 312
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.53 E-value=0.00049 Score=64.36 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=70.0
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCC--C------C-----CCCCCeeEEEecCCChHHHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKP--N------W-----NADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~--~------~-----~~~~~v~~~~~Dl~d~~~~~~ 89 (396)
+.||.|+||+|++|+.++..|....... +..+++.++..... . . ....++++. ....+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence 4689999999999999999998731110 11178888875421 1 0 000111111 12246
Q ss_pred HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047 90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP 134 (396)
Q Consensus 90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~ 134 (396)
.++++|.|+..|+.......+..+.+..|+.-.+.+.+.+.++++
T Consensus 76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~ 120 (323)
T TIGR01759 76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120 (323)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 788999988888765444447888999999999999999999875
No 313
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=97.52 E-value=6.8e-05 Score=51.65 Aligned_cols=34 Identities=15% Similarity=0.078 Sum_probs=23.8
Q ss_pred ccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047 359 AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF 392 (396)
Q Consensus 359 ~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~ 392 (396)
.++.|++||++ |||+|+++++++++++.+|+++.
T Consensus 24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 56789999986 69999999999999999998764
No 314
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.47 E-value=0.00042 Score=64.66 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=67.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCC-------CC----CCeeEEEecCCChHHHHHHHh
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-------AD----HLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~-------~~----~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
+||.|+||||++|..++..|+. .|+ +|++++|....... .+ ..... ..... .+ .+.+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~-----~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d-~~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAK-----EDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SD-LSDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CC-HHHhC
Confidence 5899999999999999999998 554 59999995411100 00 00110 11111 11 23489
Q ss_pred cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047 93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR 137 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~ 137 (396)
++|.|+-+++.......+..+....|+.-.+.+++.+.+..++.+
T Consensus 72 ~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~ 116 (309)
T cd05294 72 GSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTK 116 (309)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 999888887654333335577889999999999998888765443
No 315
>PRK05442 malate dehydrogenase; Provisional
Probab=97.46 E-value=0.0011 Score=62.14 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=67.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-----------HHHHHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKL 91 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~~~~~~ 91 (396)
++||.|+||+|++|+.++..|....... .-.++..++..+... ..+-...|+.|. ....+.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~-----~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~ 78 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALK-----ALEGVVMELDDCAFPLLAGVVITDDPNVAF 78 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCccc-----ccceeehhhhhhhhhhcCCcEEecChHHHh
Confidence 4699999999999999999887621110 011688888754211 000111111111 1224678
Q ss_pred hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047 92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA 133 (396)
Q Consensus 92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 133 (396)
+++|.|+-+|+.......+..+.+..|+.-.+.+.+.+.++.
T Consensus 79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 120 (326)
T PRK05442 79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA 120 (326)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 899988888775443444778889999999999999999864
No 316
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.40 E-value=0.00093 Score=62.05 Aligned_cols=109 Identities=17% Similarity=0.116 Sum_probs=73.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----CC--CCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----AD--HLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~--~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
+||.|+||+|++|+.++..|...... .++.+++.+ ..... .+ ....+.... ..+++.+.++++|.|+-
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~---~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvi 74 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLV---SELALYDIV-NTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVI 74 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC---cEEEEEecC-ccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEE
Confidence 48999999999999999999873211 378888876 21100 00 111111110 11234567899998888
Q ss_pred EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
+|+....+..+..++++.|..-.+.+.+...+++++...++
T Consensus 75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv 115 (310)
T cd01337 75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI 115 (310)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 87765444447888999999999999999998876554443
No 317
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.40 E-value=0.00023 Score=65.27 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=59.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (396)
-.++|.|||||.|.++++++.+.-.. .+...-+..|+..+. ..+.+...++.+|.+|++++.+..+.+
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~-~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVF-EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcc-cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 35899999999999999999872211 355666667764321 011122338999999999999999999
Q ss_pred CCeeEEEEeccCCC
Q 016047 95 TDVTHIFYVTWTNR 108 (396)
Q Consensus 95 ~~V~h~a~~~~~~~ 108 (396)
..|++|++.-..+.
T Consensus 85 ~vivN~vGPyR~hG 98 (423)
T KOG2733|consen 85 RVIVNCVGPYRFHG 98 (423)
T ss_pred EEEEeccccceecC
Confidence 99999988543443
No 318
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.39 E-value=9.7e-05 Score=60.64 Aligned_cols=101 Identities=19% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc------
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------ 93 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~------ 93 (396)
++.-.|||||..-+|...++.|.+ +|..|..++-..+.- .....++-|...|+++.++++.+++.
T Consensus 8 kglvalvtggasglg~ataerlak-----qgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAK-----QGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHh-----cCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 345679999999999999999999 899999999754321 01125778999999999998887765
Q ss_pred -CCCeeEEEEeccCCCc------------cHHHHHHhHHHHHHHHHHHH
Q 016047 94 -LTDVTHIFYVTWTNRS------------TEAENCKINGSMFRNVLRAV 129 (396)
Q Consensus 94 -~~~V~h~a~~~~~~~~------------~~~~~~~~nv~gt~~ll~a~ 129 (396)
.|..++||+.+..... +....+++|+.||-|++...
T Consensus 83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 4568888886542211 33445689999999887643
No 319
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.22 E-value=0.0017 Score=60.39 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=71.6
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCC-CCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
||.|+||+|.+|+.++..|..... ..++.++++++... ... .....+.... +.+++.+.++++|.|+-.|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~---~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY---VSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC---CcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence 589999999999999999987321 12789898865111 000 0111111101 1122456789999888887
Q ss_pred EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047 102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV 139 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~ 139 (396)
+....+..+..+....|+.-.+.+.+.+.+.+++-..+
T Consensus 76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iii 113 (312)
T TIGR01772 76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMIL 113 (312)
T ss_pred CCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEE
Confidence 75444444778889999999999999999887655433
No 320
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.19 E-value=0.0054 Score=57.40 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=70.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
++||.|+|| |.+|+.++..|.. .|. ++..++++.... .....++.+... + .+.++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~-----~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~ 72 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVN-----QGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCK 72 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhC
Confidence 479999997 9999999999987 444 799999865421 000012222222 1 24578
Q ss_pred cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047 93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 138 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~ 138 (396)
++|.|+-.|+....+..+..+.+..|+.-.+.+++.+++.++....
T Consensus 73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v 118 (315)
T PRK00066 73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIF 118 (315)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 9998888877544444467888999999999999999988764443
No 321
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.17 E-value=0.0012 Score=62.58 Aligned_cols=75 Identities=16% Similarity=0.145 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCChhHHH--HHHHcCCCCCCCCCcEEEEEeCCCC--C-C-----C---------CC--CCCeeEEEecCC
Q 016047 24 YQSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPK--P-N-----W---------NA--DHLVEYVQCDVS 82 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~~--~-~-----~---------~~--~~~v~~~~~Dl~ 82 (396)
-+|++|||||++-+|.+ ++++| + .|.+|+++++... . . | .. ...+..+.+|++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVs 113 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAF 113 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCC
Confidence 35899999999999999 89999 7 7999888885321 1 0 0 01 123457899999
Q ss_pred ChHHHHHHHh-------cCCCeeEEEEec
Q 016047 83 DPEETQAKLS-------QLTDVTHIFYVT 104 (396)
Q Consensus 83 d~~~~~~~~~-------~~~~V~h~a~~~ 104 (396)
+++++.++++ .+|.++|.++.+
T Consensus 114 s~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 114 SDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 9987655443 367778876643
No 322
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.15 E-value=0.0033 Score=60.98 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=72.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCC--CCCc--EEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTP--GGPW--KVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~--~~g~--~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~ 89 (396)
.-||.|+||+|++|++++..|....-. .++. +++.++++.+.. . +...++.+..+ + .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 468999999999999999999873000 0143 688888765432 0 00112221122 2 35
Q ss_pred HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcc-cCCCcceEE
Q 016047 90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIP-NAPNLRHVC 140 (396)
Q Consensus 90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~~~~ 140 (396)
.++++|.|+-.|+....+..+..+..+.|+.-.+.+.+...+ ++++.+.++
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIV 224 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIV 224 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 688999888887754434447788999999999999999998 566555444
No 323
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.14 E-value=0.00083 Score=57.46 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=40.9
Q ss_pred EcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh--HHHHHHHhcCCCeeEEEEec
Q 016047 31 VGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT 104 (396)
Q Consensus 31 tGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~~~~~V~h~a~~~ 104 (396)
--+||-.|..|++++.. +|++|+.+.....-. .+.+++.+.+.=.+. +.+.+.+..+|.++|+|+.+
T Consensus 25 N~SSG~~G~~lA~~~~~-----~Ga~V~li~g~~~~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 25 NRSSGKMGAALAEEAAR-----RGAEVTLIHGPSSLP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS 93 (185)
T ss_dssp ES--SHHHHHHHHHHHH-----TT-EEEEEE-TTS------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred CCCcCHHHHHHHHHHHH-----CCCEEEEEecCcccc--ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence 34589999999999999 899999998764211 124777666553222 34555667788899998753
No 324
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.08 E-value=0.0053 Score=57.28 Aligned_cols=99 Identities=13% Similarity=0.031 Sum_probs=70.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHh
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
+||.|.| +|.+|+.++..|+. .| ++|++++|++.... .......+.. .+. +.+.
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~-----~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~ 67 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVN-----QGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCK 67 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhC
Confidence 4899999 59999999999988 56 58999999764320 0011222221 122 3468
Q ss_pred cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047 93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR 137 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~ 137 (396)
++|.|+.+++.......+..+.+..|+.-.+.+.+.+++++++..
T Consensus 68 ~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~ 112 (306)
T cd05291 68 DADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGI 112 (306)
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 899888887754444446788899999999999999999876543
No 325
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.00 E-value=0.0015 Score=58.15 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=45.9
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH-------HhcCCCeeE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-------LSQLTDVTH 99 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-------~~~~~~V~h 99 (396)
+.+=-.++|.||.+++++|.+ +|++|+++++..... . . ....+|+.+.+++.+. +..+|.++|
T Consensus 17 R~itN~SSGgIG~AIA~~la~-----~Ga~Vvlv~~~~~l~--~-~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn 86 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLS-----AGHEVTLVTTKRALK--P-E--PHPNLSIREIETTKDLLITLKELVQEHDILIH 86 (227)
T ss_pred eeecCCcccHHHHHHHHHHHH-----CCCEEEEEcChhhcc--c-c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence 344444599999999999999 899999887642111 0 0 1235788887655443 234677899
Q ss_pred EEEec
Q 016047 100 IFYVT 104 (396)
Q Consensus 100 ~a~~~ 104 (396)
+|+.+
T Consensus 87 nAgv~ 91 (227)
T TIGR02114 87 SMAVS 91 (227)
T ss_pred CCEec
Confidence 88753
No 326
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.97 E-value=0.0011 Score=63.44 Aligned_cols=73 Identities=11% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h~ 100 (396)
+.++|.|.||||++|..|++.|.+. ..++|+.+.+..... .......+...+|+.+.++++. .++++|.||-+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h----P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH----PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCC 111 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC----CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEc
Confidence 5679999999999999999999984 256899988754321 0011111223345443333332 25778865554
No 327
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.93 E-value=0.0028 Score=60.87 Aligned_cols=73 Identities=21% Similarity=0.017 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHH
Q 016047 23 SYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86 (396)
Q Consensus 23 ~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~ 86 (396)
..+++|||||| ||.+|..++++|.+ .|++|+.+.+......+ .. ...+|+.+.++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~-----~Ga~V~~~~g~~~~~~~--~~--~~~~~v~~~~~ 253 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYK-----RGADVTLITGPVSLLTP--PG--VKSIKVSTAEE 253 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHH-----CCCEEEEeCCCCccCCC--CC--cEEEEeccHHH
Confidence 45789999999 47899999999999 89999998876533211 22 35689988877
Q ss_pred H-HHHH----hcCCCeeEEEEec
Q 016047 87 T-QAKL----SQLTDVTHIFYVT 104 (396)
Q Consensus 87 ~-~~~~----~~~~~V~h~a~~~ 104 (396)
+ ++.+ ..+|.++++|+.+
T Consensus 254 ~~~~~~~~~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 254 MLEAALNELAKDFDIFISAAAVA 276 (390)
T ss_pred HHHHHHHhhcccCCEEEEccccc
Confidence 7 4344 3467788888754
No 328
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.81 E-value=0.0098 Score=57.82 Aligned_cols=110 Identities=7% Similarity=-0.071 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHH
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQ 88 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~ 88 (396)
.+-+|+||||+|.||.+|+-.|.+-.-.. +-..++.++..+... .+...++.+. .| ..
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~ 194 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LD 194 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CH
Confidence 35789999999999999999998721110 112355555531111 0111123332 21 14
Q ss_pred HHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 89 AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 89 ~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
++++++|.|+-+++.......+..+..+.|+.-.+.+.++..+.+++-..++
T Consensus 195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~Vl 246 (452)
T cd05295 195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVI 246 (452)
T ss_pred HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 6789999888887754444447788899999999999999988865334444
No 329
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.75 E-value=0.008 Score=55.46 Aligned_cols=105 Identities=18% Similarity=0.123 Sum_probs=70.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHhcC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (396)
+||.|+|| |+||+.++..|+.+. -+.++..++....... ..... ..+.+| .+ .+.++++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~---~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQG---LGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccc---ccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCC
Confidence 58999999 999999999997632 1337899998732210 00011 122222 11 3457888
Q ss_pred CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
|.|+-.|+.+.-+..+..++++.|..-.+.+.++..+.+++...++
T Consensus 71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV 116 (313)
T COG0039 71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV 116 (313)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 9888887655444447888999999999999999988876443333
No 330
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.73 E-value=0.0019 Score=57.35 Aligned_cols=69 Identities=20% Similarity=0.196 Sum_probs=54.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~ 100 (396)
|+++|.| .|-+|+.+++.|.+ .||+|+++++++.... ......+.+.+|-+|++.|+++ +.++|.++-+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~-----~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSE-----EGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAA 73 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHh-----CCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence 5788888 89999999999999 8999999999875421 1124678999999999999886 6666654444
No 331
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.0011 Score=60.47 Aligned_cols=78 Identities=19% Similarity=0.052 Sum_probs=55.7
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
+..|...++|-|||||.|..++++|.. +|.+-....|+..+.. ...-+.++-..++.++..+++.+...+.|+
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~-----~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl 76 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAR-----EGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL 76 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHH-----cCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence 455667899999999999999999998 6777655567653210 001122333444445889999999999999
Q ss_pred EEEEe
Q 016047 99 HIFYV 103 (396)
Q Consensus 99 h~a~~ 103 (396)
||++.
T Consensus 77 ncvGP 81 (382)
T COG3268 77 NCVGP 81 (382)
T ss_pred ecccc
Confidence 99884
No 332
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.71 E-value=0.0038 Score=54.08 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE--EEEEeCCCCCCCCCCCCeeEE--------EecCCChHHHHHHH
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGVARRPKPNWNADHLVEYV--------QCDVSDPEETQAKL 91 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~--V~~l~R~~~~~~~~~~~v~~~--------~~Dl~d~~~~~~~~ 91 (396)
..|.+-|||||++.-||..++..+.+ .+-+ +++..|.... ..++.+. .+|++....+.+..
T Consensus 3 ~~~r~villTGaSrgiG~~~v~~i~a-----ed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~ 73 (253)
T KOG1204|consen 3 LNMRKVILLTGASRGIGTGSVATILA-----EDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALR 73 (253)
T ss_pred cccceEEEEecCCCCccHHHHHHHHh-----cchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHH
Confidence 45778899999999999888888876 3333 4444443222 1333333 44444443333322
Q ss_pred hc-------CCCeeEEEEeccCCC-------c--cHHHHHHhHHHHHHHHHHHHccc
Q 016047 92 SQ-------LTDVTHIFYVTWTNR-------S--TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 92 ~~-------~~~V~h~a~~~~~~~-------~--~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
+. -+.|+|.|+...... + ....+++.|+.+...|...+.+.
T Consensus 74 e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~ 130 (253)
T KOG1204|consen 74 EAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPK 130 (253)
T ss_pred hhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHH
Confidence 21 234999988644321 1 45678999999999888866554
No 333
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.67 E-value=0.017 Score=51.95 Aligned_cols=96 Identities=16% Similarity=0.021 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF 101 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a 101 (396)
|.++|||.|||+= |+.|++.|.+ .|++|++.+-..... .....+.++.|-+.+.+.+.+.++. ++.|+..
T Consensus 1 ~~~~IlvlgGT~e-gr~la~~L~~-----~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA- 72 (248)
T PRK08057 1 MMPRILLLGGTSE-ARALARALAA-----AGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA- 72 (248)
T ss_pred CCceEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEEC-
Confidence 4578999999998 9999999998 788877665443222 2335778888888899999998875 4446655
Q ss_pred EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047 102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV 139 (396)
Q Consensus 102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~ 139 (396)
+++.. ..-++|+.++|++.+....++
T Consensus 73 --THPfA----------~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 73 --THPYA----------AQISANAAAACRALGIPYLRL 98 (248)
T ss_pred --CCccH----------HHHHHHHHHHHHHhCCcEEEE
Confidence 33221 134557889999886433333
No 334
>PRK04148 hypothetical protein; Provisional
Probab=96.60 E-value=0.0025 Score=51.04 Aligned_cols=67 Identities=13% Similarity=0.048 Sum_probs=50.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
+++|++.| +| .|.+++..|.+ .|++|++++.++.... .....++++.+|+.+++ .+..+++|.|+.+
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~-----~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysi 84 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKE-----SGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSI 84 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence 47899999 78 69899999998 8999999998875321 11246789999999986 2446777766555
No 335
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.60 E-value=0.024 Score=52.84 Aligned_cols=101 Identities=8% Similarity=0.013 Sum_probs=69.3
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCC-CCCeeEEEecCCChHHHHHHHhcC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNA-DHLVEYVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~-~~~v~~~~~Dl~d~~~~~~~~~~~ 94 (396)
||.|.|+ |++|+.++..|+..... -++..++...+.. ... ..++.+..+| .+.++++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~a 69 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF---SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADA 69 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCC
Confidence 5889997 99999999999874322 2799999864321 111 1134444333 3568899
Q ss_pred CCeeEEEEeccCCCcc--HHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047 95 TDVTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLRH 138 (396)
Q Consensus 95 ~~V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~~ 138 (396)
|.|+-.|+....+..+ ..+.+..|+.-.+.+.+.+.+++++...
T Consensus 70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ 115 (307)
T cd05290 70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVI 115 (307)
T ss_pred CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 9877777754333333 4888999999999999999998765443
No 336
>PLN02602 lactate dehydrogenase
Probab=96.57 E-value=0.031 Score=52.98 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=70.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
+||.|+|+ |.+|+.++..|+..... -++..++.+.... ........+ .++ .+ .+.++++|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d----y~~~~daD 107 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLA---DELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD----YAVTAGSD 107 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC----HHHhCCCC
Confidence 59999995 99999999999873322 2799999865321 000012222 221 12 23478999
Q ss_pred CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
.|+-+|+....+..+..+.+..|+.-.+.+.+.+++++++-..++
T Consensus 108 iVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~iviv 152 (350)
T PLN02602 108 LCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLI 152 (350)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 888887754433346778889999999999999998876554433
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.54 E-value=0.0028 Score=62.64 Aligned_cols=69 Identities=22% Similarity=0.151 Sum_probs=54.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~ 100 (396)
|+|+|.|+ |.+|.++++.|.+ .|++|+++++++... .....+++++.+|.+++..+.++ +.+++.|+-+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~-----~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSG-----ENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-----CCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 48999996 9999999999998 799999999876431 11124688999999999888876 6777765554
No 338
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.51 E-value=0.0067 Score=56.10 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCC---CCC------CC-CCCCeeEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP---KPN------WN-ADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~---~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
.+++++|+|| |-+|++++..|.+ .|++ |++++|+. ... +. ....+.+..+|+.+.+++.+.+.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~-----~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCAL-----DGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence 4579999998 8999999999998 7875 99999975 111 10 01234456788888877877778
Q ss_pred cCCCeeEE
Q 016047 93 QLTDVTHI 100 (396)
Q Consensus 93 ~~~~V~h~ 100 (396)
.+|.|+++
T Consensus 199 ~~DilINa 206 (289)
T PRK12548 199 SSDILVNA 206 (289)
T ss_pred cCCEEEEe
Confidence 78877775
No 339
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.46 E-value=0.034 Score=51.89 Aligned_cols=105 Identities=13% Similarity=0.037 Sum_probs=69.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEE-ecCCChHHHHHHHhc
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQ-CDVSDPEETQAKLSQ 93 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~-~Dl~d~~~~~~~~~~ 93 (396)
.+||.|+|+ |++|+.++..|+.... .-++..++.+.... ........+.. +| . +.+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~---~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d---y----~~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL---ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD---Y----SVTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC---CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC---H----HHhCC
Confidence 359999995 9999999999987332 23799998765321 00001112222 22 2 23788
Q ss_pred CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
+|.|+-+|+....+..+..+.+..|+.-.+.+.+.+++.+++-..++
T Consensus 72 adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~viv 118 (312)
T cd05293 72 SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLV 118 (312)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 99877777654333336778889999999999999999876554433
No 340
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.45 E-value=0.021 Score=50.95 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-C--CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-W--NADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
+...||.|.||.|-||..|...|..+|.++ +....+-...+- . ..+=+-........-++.+.+++.++|.|+-
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs---~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvI 102 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVS---ELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVI 102 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHhcCcccc---eeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEe
Confidence 345799999999999999988887766554 333333221110 0 0000111122333345689999999998777
Q ss_pred EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047 100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 135 (396)
Q Consensus 100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 135 (396)
-|+...-+.-..+++|++|..-.+.|..++.+..++
T Consensus 103 PAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~ 138 (345)
T KOG1494|consen 103 PAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN 138 (345)
T ss_pred cCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc
Confidence 665433333367899999999999999999988654
No 341
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.45 E-value=0.0065 Score=48.50 Aligned_cols=69 Identities=22% Similarity=0.312 Sum_probs=40.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCCCCCCCCC----CCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKPNWNAD----HLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~~~~~~----~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
++|.|.|++|.+|+.+++.+.+. .++++.+ ++|++......+ .++. ...+.-.+++++++..+|.|+..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~----~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES----PGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS----TTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhc----CCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEc
Confidence 48999999999999999999975 5788544 455542211000 0000 11111124567777778877776
No 342
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.43 E-value=0.0068 Score=48.15 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=26.7
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEE-EEEeCCC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKV-YGVARRP 64 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~ 64 (396)
||.|+||||++|..|++.|.+.+ .+++ .++.++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp----~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHP----DFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTS----TEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCC----CccEEEeeeecc
Confidence 69999999999999999999853 4564 4455554
No 343
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=96.42 E-value=0.024 Score=54.25 Aligned_cols=106 Identities=16% Similarity=0.061 Sum_probs=66.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEE--eCCCCCC----------C-CCCCCeeEEEecCCChHHHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGV--ARRPKPN----------W-NADHLVEYVQCDVSDPEETQA 89 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l--~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~ 89 (396)
+.||.|+||+|++|++++..|......... ..++.+ +++.+.. . +...++.+..+| .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~-------y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP-------YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence 479999999999999999999873221100 123333 5443221 0 001122222222 35
Q ss_pred HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcc
Q 016047 90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLR 137 (396)
Q Consensus 90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~ 137 (396)
.++++|.|+-.|+....+..+..+.+..|+.-.+.+.+.+.++. +..+
T Consensus 117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~i 165 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCK 165 (387)
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 68899988888775444444778889999999999999998854 4433
No 344
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.31 E-value=0.009 Score=54.47 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=70.4
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCC----cEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGP----WKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
|.|+||+|.+|..++..|+. .| .+|+.++++...... ...... ....+.-.+++.++++++|.|
T Consensus 1 I~IIGagG~vG~~ia~~l~~-----~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLAD-----GSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHh-----CCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEE
Confidence 57999999999999999987 45 589999987533200 000000 011111122356778999988
Q ss_pred eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
+-.++..........+....|+.-.+.+.+.+++.+++...++
T Consensus 75 v~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~ 117 (263)
T cd00650 75 IITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIV 117 (263)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 8776644333345667788899999999999998876554443
No 345
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=96.23 E-value=0.016 Score=51.10 Aligned_cols=79 Identities=20% Similarity=0.181 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCeeEEEecCCChHHHHHH--
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNA--DHLVEYVQCDVSDPEETQAK-- 90 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~--~~~v~~~~~Dl~d~~~~~~~-- 90 (396)
|.|-+||||++..||-.++.+|++......-..+....|.-++. ... .-.++++.+|+++..++..+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 56788999999999999999999732111112344455654321 112 23567899999998765444
Q ss_pred -----HhcCCCeeEEEE
Q 016047 91 -----LSQLTDVTHIFY 102 (396)
Q Consensus 91 -----~~~~~~V~h~a~ 102 (396)
++..|.|+-.|+
T Consensus 82 di~~rf~~ld~iylNAg 98 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAG 98 (341)
T ss_pred HHHHHhhhccEEEEccc
Confidence 444554554444
No 346
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.23 E-value=0.0049 Score=65.88 Aligned_cols=76 Identities=29% Similarity=0.195 Sum_probs=54.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCC---------CCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPG---------GPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~---------~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (396)
.++|+|.| +|++|+..++.|.+.+... .+..|++.++..... . ...++++.+..|+.|.+++.++++
T Consensus 569 ~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 569 SQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 47999999 5999999999998743210 012377777664321 0 011367789999999999999989
Q ss_pred cCCCeeEEE
Q 016047 93 QLTDVTHIF 101 (396)
Q Consensus 93 ~~~~V~h~a 101 (396)
++|.|+.+.
T Consensus 648 ~~DaVIsal 656 (1042)
T PLN02819 648 QVDVVISLL 656 (1042)
T ss_pred CCCEEEECC
Confidence 999877763
No 347
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.20 E-value=0.016 Score=54.28 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCC---------CCCCe-eEEEecCCChHHHHHHHh
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWN---------ADHLV-EYVQCDVSDPEETQAKLS 92 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~---------~~~~v-~~~~~Dl~d~~~~~~~~~ 92 (396)
..+||.|+|| |.+|+.++..|.. .| .+|+.++++...... ...+. ..+.+ ..+.+ +++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~-----~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~ 72 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQ-----KNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIK 72 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhC
Confidence 3569999996 9999999998887 55 579999986532100 00010 01111 11233 678
Q ss_pred cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047 93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 136 (396)
Q Consensus 93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 136 (396)
++|.|+-+++.......+..+.+..|..-.+.+.+.+.+.+++-
T Consensus 73 ~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a 116 (319)
T PTZ00117 73 DSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNA 116 (319)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 99988887764433334567788899998999999888876544
No 348
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.11 E-value=0.019 Score=52.11 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=42.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
++|.|+|++|.+|+.+++.+.+. .++++.++. +.+..... . -..++...+++++++.++|.|+++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~----~~~elvav~d~~~~~~~~----~--~~~~i~~~~dl~~ll~~~DvVid~ 67 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA----EDLELVAAVDRPGSPLVG----Q--GALGVAITDDLEAVLADADVLIDF 67 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCCccccc----c--CCCCccccCCHHHhccCCCEEEEC
Confidence 58999999999999999998863 467866654 44332110 0 122333334566666678877776
No 349
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.08 E-value=0.059 Score=50.33 Aligned_cols=98 Identities=20% Similarity=0.151 Sum_probs=67.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC------CCC----CCCeeEEEecCCChHHHHHHHhc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN------WNA----DHLVEYVQCDVSDPEETQAKLSQ 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~------~~~----~~~v~~~~~Dl~d~~~~~~~~~~ 93 (396)
++|.|.|+ |.+|..++..|.. .| .+|.+++++.... ... .....+..+ + .+.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~-----~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d----~~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLL-----RGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D----YADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHH-----cCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C----HHHhCC
Confidence 47999996 9999999999988 56 5899999875321 000 011122222 2 235789
Q ss_pred CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047 94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 136 (396)
Q Consensus 94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 136 (396)
+|.|+-+++.......+..+....|+.-.+.+.+.+++.+++-
T Consensus 68 aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~g 110 (308)
T cd05292 68 ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDA 110 (308)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 9988877665443334667788999999999999888876543
No 350
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=96.01 E-value=0.021 Score=53.24 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=65.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
+||.|.|+ |++|..++..|.. .|+ +|++++....... ..........+.+.-..+..+ +.++|.|+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~-----~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVI 74 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAE-----KELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVV 74 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHH-----cCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEE
Confidence 58999995 9999999999987 666 8999998543210 000000000011110112233 67888777
Q ss_pred EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047 99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL 136 (396)
Q Consensus 99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 136 (396)
-+++.......+..+.+..|+.-.+.+++.+.++.++.
T Consensus 75 itag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~ 112 (305)
T TIGR01763 75 ITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNP 112 (305)
T ss_pred EcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 77664332223566788899999999999888876543
No 351
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.87 E-value=0.016 Score=54.78 Aligned_cols=65 Identities=20% Similarity=0.114 Sum_probs=41.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc---EEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
++|+|.||||++|..|++.|.+ .+| ++..+.+..... .....+.+....|+.+. .+.++|.||-+
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~-----~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A 70 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEE-----RNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFS 70 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence 5899999999999999999988 455 457787654321 11112234444555432 34678866644
No 352
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.84 E-value=0.023 Score=53.12 Aligned_cols=103 Identities=19% Similarity=0.190 Sum_probs=64.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC---C--CCC-CeeEEEecCCChHHHHHHHhcCCCee
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW---N--ADH-LVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~---~--~~~-~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
+||.|+|| |.+|+.++..|.. .|. +|+++++.+.... . .+. ......+.+....+. +.+.++|.|+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~-----~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVi 75 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLAL-----KELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVV 75 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEE
Confidence 69999997 9999999999987 554 8999998653220 0 000 000000111111122 3578899877
Q ss_pred EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047 99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 135 (396)
Q Consensus 99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 135 (396)
-+++.......+..+....|+.-.+.+++.+.+..++
T Consensus 76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~ 112 (307)
T PRK06223 76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPD 112 (307)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7765433222355667788999988898888877644
No 353
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=95.79 E-value=0.014 Score=55.27 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
|.++|+|.||||++|..+++.|.+. .+++++++.++
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~----p~~elv~v~~~ 36 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNH----PEVEIVAVTSR 36 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcC----CCceEEEEECc
Confidence 3479999999999999999999974 36788777764
No 354
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.65 E-value=0.14 Score=47.99 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=67.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCeeEEE-ecCCChHHHHHHH
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----------NADHLVEYVQ-CDVSDPEETQAKL 91 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~~~~v~~~~-~Dl~d~~~~~~~~ 91 (396)
.+||.|+| +|.+|+.++..|.. .|. +|+.++.++.... ......++.. .| . +++
T Consensus 6 ~~KI~IIG-aG~vG~~ia~~la~-----~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l 72 (321)
T PTZ00082 6 RRKISLIG-SGNIGGVMAYLIVL-----KNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDI 72 (321)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-----CCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHh
Confidence 36999999 69999999998887 564 7999998765220 0011122221 22 2 357
Q ss_pred hcCCCeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047 92 SQLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNL 136 (396)
Q Consensus 92 ~~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~ 136 (396)
+++|.|+..++....... +..+....|+.-.+.+++.+.+.+++-
T Consensus 73 ~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a 122 (321)
T PTZ00082 73 AGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNA 122 (321)
T ss_pred CCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 899988888765433222 456677889998999999888876543
No 355
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.58 E-value=0.018 Score=56.96 Aligned_cols=68 Identities=19% Similarity=0.057 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
++|+|+|+|+++ +|..+++.|++ .|++|++.++...... ....+++++.+|..+ +...++|.|
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~-----~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKK-----LGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLV 72 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEE
Confidence 358999999877 99999999999 8999999998752211 112357788888765 235667877
Q ss_pred eEEEE
Q 016047 98 THIFY 102 (396)
Q Consensus 98 ~h~a~ 102 (396)
++.++
T Consensus 73 v~~~g 77 (450)
T PRK14106 73 VVSPG 77 (450)
T ss_pred EECCC
Confidence 77644
No 356
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.57 E-value=0.021 Score=54.89 Aligned_cols=47 Identities=23% Similarity=0.351 Sum_probs=37.2
Q ss_pred ccccccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 9 IGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
.+.+.+|.+..| ..++|.|.||.|.+|..++..|.+ .||+|++.+|+
T Consensus 85 ~q~~~~~~~~~~---~~~~I~IiGG~GlmG~slA~~l~~-----~G~~V~~~d~~ 131 (374)
T PRK11199 85 SENDKGFKTLNP---DLRPVVIVGGKGQLGRLFAKMLTL-----SGYQVRILEQD 131 (374)
T ss_pred HhHHhcccccCc---ccceEEEEcCCChhhHHHHHHHHH-----CCCeEEEeCCC
Confidence 344445653333 447899999999999999999998 79999999985
No 357
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.55 E-value=0.02 Score=58.22 Aligned_cols=69 Identities=20% Similarity=0.089 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTD 96 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~ 96 (396)
+.++.+|+|.| .|-+|+++++.|.+ +|++|++++.+++.. ...+.+.+.+.||.+|++.++++ ++++|.
T Consensus 414 ~~~~~hiiI~G-~G~~G~~la~~L~~-----~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~ 484 (558)
T PRK10669 414 VDICNHALLVG-YGRVGSLLGEKLLA-----AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARW 484 (558)
T ss_pred cccCCCEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCE
Confidence 45567999999 89999999999998 799999999876432 11234788999999999887652 344443
No 358
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=95.40 E-value=0.11 Score=48.37 Aligned_cols=99 Identities=14% Similarity=0.015 Sum_probs=66.3
Q ss_pred EEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 30 IVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 30 VtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
|.| +|++|+.++..|...+.. -++..+++..... .+...++.+..+ + .+.++++|.|+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivV 69 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIA---DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVV 69 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCC---CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEE
Confidence 456 599999999999874322 2799999865321 111122333222 2 35688999888
Q ss_pred EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047 99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV 139 (396)
Q Consensus 99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~ 139 (396)
-.|+....+..+..+.+..|+.-.+.+.+.+++++++...+
T Consensus 70 itag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi 110 (299)
T TIGR01771 70 ITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFL 110 (299)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 87775443434678889999999999999999887654433
No 359
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.33 E-value=0.14 Score=47.67 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=68.6
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
|.|.| +|.+|+.++..|+. .| .++++++++.... ........+..+ .+ .+.+.++|
T Consensus 1 i~iiG-aG~VG~~~a~~l~~-----~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIG-AGNVGAAVAFALIA-----KGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADAD 68 (300)
T ss_pred CEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCC
Confidence 46888 58999999999987 45 5899999875421 000011222221 11 34688999
Q ss_pred CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
.|+-+++.......+..+....|+.-.+.+.+.+++++++...++
T Consensus 69 iVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv 113 (300)
T cd00300 69 IVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILV 113 (300)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 888887754433446788889999999999999998875544333
No 360
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=95.23 E-value=0.03 Score=48.85 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=79.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEE--EEeCCCCCCCC-------CCCCee-EEEecCCChHHHHHHHhcC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY--GVARRPKPNWN-------ADHLVE-YVQCDVSDPEETQAKLSQL 94 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~--~l~R~~~~~~~-------~~~~v~-~~~~Dl~d~~~~~~~~~~~ 94 (396)
+-+||||||+|.||.+|+-.+.+-.-......|+ .++-.+..... .+.-+. ...++.+. +-..+++++
T Consensus 4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvatt--d~~~afkdv 81 (332)
T KOG1496|consen 4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATT--DEVEAFKDV 81 (332)
T ss_pred ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhccc--ChhhhhccC
Confidence 3589999999999999999988610000001122 22211111000 000000 01111111 123567777
Q ss_pred CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047 95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD 173 (396)
Q Consensus 95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~ 173 (396)
+..+-+.+......-...++...|+.-.+.--.+..++ .+.++-++ ++ -+ ...+.....+..|..|
T Consensus 82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlV-Vg------NP------aNTNali~~k~ApsIP 148 (332)
T KOG1496|consen 82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLV-VG------NP------ANTNALILKKFAPSIP 148 (332)
T ss_pred cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEE-ec------Cc------cccchhHHhhhCCCCc
Confidence 76555544322222256777888887766655666665 33344333 21 11 0001112333344334
Q ss_pred CCCcc----hhHHHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047 174 APNFY----YTLEDILFEEVEKKEELSWSVHRPDTIFGFS 209 (396)
Q Consensus 174 ~~~~~----y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~ 209 (396)
..++. ....+.+.+.. ...|.++.-+.--.|+|..
T Consensus 149 ~kNfs~lTRLDhNRA~~QlA-~klgv~~~~VkNviIWGNH 187 (332)
T KOG1496|consen 149 EKNFSALTRLDHNRALAQLA-LKLGVPVSDVKNVIIWGNH 187 (332)
T ss_pred hhcchhhhhhchhhHHHHHH-HhhCCchhhcceeEEeccc
Confidence 33321 11244444443 4567777777766777843
No 361
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.21 E-value=0.023 Score=50.24 Aligned_cols=35 Identities=26% Similarity=0.151 Sum_probs=31.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
|+|.|+||+|.+|+.++..|.+ .||+|++.+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~-----~G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAK-----AGNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCCEEEEEEcCHH
Confidence 4799999999999999999998 7899999998763
No 362
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.15 E-value=0.028 Score=53.47 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
|+++|+|+||||++|+.|++.|.+. ...+++++.++.
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~----p~~el~~~~~s~ 38 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANH----PWFEVTALAASE 38 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcC----CCceEEEEEcCh
Confidence 4579999999999999999999974 234788885543
No 363
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.89 E-value=0.047 Score=55.95 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~ 100 (396)
.+.+|+|.| .|-+|+.+++.|.+ +|++|++++++++.. .....+..++.||.++++.++++ +.+++.|+-+
T Consensus 399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 399 DKPQVIIVG-FGRFGQVIGRLLMA-----NKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred ccCCEEEec-CchHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 346899999 89999999999998 799999999887532 11224678999999999988763 4455544443
No 364
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=94.76 E-value=0.18 Score=45.33 Aligned_cols=93 Identities=18% Similarity=0.087 Sum_probs=61.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC-C-CCCCCeeEEEecCCChHHHHHHHhc--CCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN-W-NADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~ 100 (396)
|+|||.|||+= |+.|++.|.+ .|+ |+.-+-.+ ... . .....++++.|-+.+.+.+.+.++. ++.|+..
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~-----~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA 73 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAE-----AGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA 73 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHh-----cCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 68999999998 9999999999 777 44333221 111 1 1224667888888899999988864 4445555
Q ss_pred EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047 101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 138 (396)
Q Consensus 101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~ 138 (396)
+++.. ..-++|+.++|++.+....+
T Consensus 74 ---THPfA----------~~is~na~~a~~~~~ipylR 98 (249)
T PF02571_consen 74 ---THPFA----------AEISQNAIEACRELGIPYLR 98 (249)
T ss_pred ---CCchH----------HHHHHHHHHHHhhcCcceEE
Confidence 22221 13456789999988643333
No 365
>PRK10537 voltage-gated potassium channel; Provisional
Probab=94.76 E-value=0.17 Score=48.85 Aligned_cols=68 Identities=10% Similarity=-0.015 Sum_probs=49.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHH-HHhcCCCeeE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQA-KLSQLTDVTH 99 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h 99 (396)
+.+|+|.| .|-+|..++++|.+ +|++|++++.+.... ....+..++.||.+|++.+++ -+++++.|+-
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~~-----~g~~vvVId~d~~~~-~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~ 308 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLRQ-----RGQAVTVIVPLGLEH-RLPDDADLIPGDSSDSAVLKKAGAARARAILA 308 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECchhhh-hccCCCcEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 46899999 68899999999987 788888888653221 122467899999999988765 3445554443
No 366
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.75 E-value=0.096 Score=44.10 Aligned_cols=55 Identities=20% Similarity=0.153 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
...+++|||+|+.+.+|..+++.|.+ .|.+|+.+.|.. +++.+.+..+|.|+.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~-----~g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLN-----RNATVTVCHSKT--------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhh-----CCCEEEEEECCc--------------------hhHHHHHhhCCEEEEcC
Confidence 34568999999877789999999998 788898888752 34667888899777663
No 367
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.74 E-value=0.036 Score=54.77 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEEecCCChHHHHH-HHhcCCCee
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQA-KLSQLTDVT 98 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~ 98 (396)
..++|+|.|+ |.+|..+++.|.+ .|++|+++++++... .. ...++.++.||.++++.+.+ .+..++.|+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~-----~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi 302 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEK-----EGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI 302 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence 3579999995 9999999999998 799999999886431 10 11367789999999988754 334555444
No 368
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=94.73 E-value=0.25 Score=43.23 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=65.5
Q ss_pred CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047 24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---W-NADHLVEYVQCDVSDPEETQAKLS--- 92 (396)
Q Consensus 24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~--- 92 (396)
.+|++||+|- .--|+..+++.|.+ .|.++......+. +. . .....--+++||+++.+++++.+.
T Consensus 5 ~GK~~lI~Gvan~rSIAwGIAk~l~~-----~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 5 EGKRILIMGVANNRSIAWGIAKALAE-----QGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CCceEEEEEecccccHHHHHHHHHHH-----cCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence 4689999996 56799999999999 8888654443321 00 0 011123478999999987766554
Q ss_pred ----cCCCeeEEEEeccCCC------c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047 93 ----QLTDVTHIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPN 132 (396)
Q Consensus 93 ----~~~~V~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~ 132 (396)
..|.++|+.+.+.-.. + .....+++-..+...+.++++..
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l 133 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL 133 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh
Confidence 4677999987543110 0 12233455555666666666655
No 369
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=94.72 E-value=0.088 Score=51.72 Aligned_cols=73 Identities=12% Similarity=0.026 Sum_probs=50.1
Q ss_pred CCCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH
Q 016047 22 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 85 (396)
Q Consensus 22 ~~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~ 85 (396)
+-.+++||||+| ||-.|..|++++.. +|.+|+.+.-... .....+++++.++ ..+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~-----~GA~VtlI~Gp~~--~~~p~~v~~i~V~--ta~ 323 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAA-----AGAEVTLISGPVD--LADPQGVKVIHVE--SAR 323 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHH-----CCCcEEEEeCCcC--CCCCCCceEEEec--CHH
Confidence 356789999986 79999999999999 8999998873322 1122467766554 344
Q ss_pred HHHHHHh---cCCCeeEEEEe
Q 016047 86 ETQAKLS---QLTDVTHIFYV 103 (396)
Q Consensus 86 ~~~~~~~---~~~~V~h~a~~ 103 (396)
++.+++. ..|.+++.|+.
T Consensus 324 eM~~av~~~~~~Di~I~aAAV 344 (475)
T PRK13982 324 QMLAAVEAALPADIAIFAAAV 344 (475)
T ss_pred HHHHHHHhhCCCCEEEEeccc
Confidence 4433332 25778888764
No 370
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=94.65 E-value=0.014 Score=45.84 Aligned_cols=66 Identities=27% Similarity=0.357 Sum_probs=46.8
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeE
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTH 99 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h 99 (396)
|+|.| .|-+|..+++.|.+ ++.+|+++++++... .....+++++.||.++++.+++ -+..++.|+-
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-----~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~ 68 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-----GGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVI 68 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-----TTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEE
T ss_pred eEEEc-CCHHHHHHHHHHHh-----CCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEE
Confidence 67888 57899999999998 677999999986421 0112468899999999998876 3344443433
No 371
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=94.62 E-value=0.058 Score=51.01 Aligned_cols=64 Identities=17% Similarity=0.109 Sum_probs=39.2
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEE---EEEeCCCCC-CCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKV---YGVARRPKP-NWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V---~~l~R~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
+|+|.||||++|..|++.|.+ ++|.+ ..+.+.... ......+.+....|+. . ..+.++|.|+-+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~-----~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~a 68 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEE-----RNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-I----ESFEGIDIALFS 68 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHh-----CCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-h----HHhcCCCEEEEC
Confidence 589999999999999999987 56653 344454322 1111123445556653 1 235677765554
No 372
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=94.57 E-value=0.13 Score=49.92 Aligned_cols=69 Identities=14% Similarity=0.091 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH 99 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h 99 (396)
..|+|||+| +|.+|..++..+.+ .|++|++++..+........ -.++.+|..|.+.+.+.++ ++|.|+-
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~vi~ 81 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSHVIDMLDGDALRAVIEREKPDYIVP 81 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchHHhh-hheEECCCCCHHHHHHHHHHhCCCEEEE
Confidence 346999999 68999999999888 79999999987643211000 1256788889988888777 5665443
No 373
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.54 E-value=0.13 Score=47.97 Aligned_cols=64 Identities=23% Similarity=0.206 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
..+++|.|.| .|.||+.+++.|.. .|++|++.+|..... +++..+ ...+++.++++.+|.|+.+
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~a-----fG~~V~~~~~~~~~~----~~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQT-----WGFPLRCWSRSRKSW----PGVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCC----CCceee----cccccHHHHHhcCCEEEEC
Confidence 3568999999 99999999999998 899999999854321 122211 1345688899999974433
No 374
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.50 E-value=0.048 Score=51.81 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=27.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR 63 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~ 63 (396)
++|.|.||||++|..+++.|.+. .++++..+ +++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h----P~~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH----PEVEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC----CCceEEEEeccc
Confidence 47999999999999999999974 35677744 543
No 375
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.41 E-value=0.086 Score=49.89 Aligned_cols=23 Identities=39% Similarity=0.553 Sum_probs=21.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPL 47 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~ 47 (396)
+.+|.|.||||++|..|++.|.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~ 29 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTD 29 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHh
Confidence 46899999999999999999987
No 376
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=94.36 E-value=0.13 Score=49.53 Aligned_cols=65 Identities=20% Similarity=0.128 Sum_probs=50.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
++|+|.|+ |.+|..++..+.+ .|++|++++..+......- --+++.+|..|.+.+.++.+.+|.|
T Consensus 3 ~~igilG~-Gql~~ml~~aa~~-----lG~~v~~~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~a~~~dvi 67 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAAP-----LGYKVIVLDPDPDSPAAQV-ADEVIVADYDDVAALRELAEQCDVI 67 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhHh-CceEEecCCCCHHHHHHHHhcCCEE
Confidence 68999995 8999999999998 8999999998654321100 1136678999999999999988854
No 377
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.03 E-value=0.083 Score=54.32 Aligned_cols=71 Identities=13% Similarity=0.083 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h~ 100 (396)
...+|+|.| .|-+|+.+++.|.+ +|+++++++.++... .....+.+++.||.++++.+++ -++.++.|+-+
T Consensus 399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 399 QQPRVIIAG-FGRFGQIVGRLLLS-----SGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred ccCcEEEEe-cChHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 356899999 88999999999998 799999999887532 1122467899999999998765 33445544443
No 378
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.00 E-value=0.24 Score=44.28 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK 65 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~ 65 (396)
.++|.|.||+|-.|+.+++.+.+. .+++ +-+++|.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~----~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA----PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC----CCceEEEEEecCCc
Confidence 468999999999999999999985 4566 556667654
No 379
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=93.99 E-value=0.5 Score=43.93 Aligned_cols=96 Identities=19% Similarity=0.168 Sum_probs=62.3
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC------C-----CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------N-----ADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~------~-----~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
|.|+|| |.+|..++..|.. .|. +|+++++++.... . ...... +... .| .+.++++|
T Consensus 1 I~IIGa-G~vG~~ia~~la~-----~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d----~~~l~dAD 68 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLAL-----KELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-ND----YEDIAGSD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHh-----CCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CC----HHHhCCCC
Confidence 578997 9999999998887 555 9999998754210 0 000111 1110 12 23578999
Q ss_pred CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047 96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN 135 (396)
Q Consensus 96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~ 135 (396)
.|+-+++.......+..+....|+.-.+.+++.+.+..++
T Consensus 69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~ 108 (300)
T cd01339 69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPN 108 (300)
T ss_pred EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8888776433333345566778998888888888887643
No 380
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.93 E-value=0.061 Score=50.70 Aligned_cols=22 Identities=41% Similarity=0.564 Sum_probs=21.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPL 47 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~ 47 (396)
.+|+|+||||++|..|++.|.+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~ 26 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEE 26 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhh
Confidence 6899999999999999999996
No 381
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=93.85 E-value=0.13 Score=47.76 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=28.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 62 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 62 (396)
|..||.|.||+|+.|..|++.|...| ..+++..+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp----~ve~~~~ss 35 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHP----DVELILISS 35 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCC----CeEEEEeec
Confidence 34799999999999999999999864 346666654
No 382
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=93.74 E-value=0.52 Score=44.57 Aligned_cols=37 Identities=30% Similarity=0.286 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
--+.++|+|.| .|-+|+++++.|.. .|+ ++++++++.
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La~-----aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALVR-----AGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence 33467999999 57799999999998 687 688888864
No 383
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=93.71 E-value=0.33 Score=45.96 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
.-+..+|+|.| .|.+|++++..|.. .|. +|++++++.
T Consensus 21 ~L~~~~VlVvG-~GglGs~va~~La~-----aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIG-AGALGTANAEMLVR-----AGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCc
Confidence 33457999999 59999999999998 677 799999863
No 384
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=93.61 E-value=0.19 Score=48.47 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=49.3
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH 99 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h 99 (396)
||+|.| +|.+|..++..+.+ .|++|++++..+......... +.+.+|..|++.+.+..+ ++|.|+.
T Consensus 1 kililG-~g~~~~~l~~aa~~-----~G~~v~~~d~~~~~~~~~~ad-~~~~~~~~d~~~l~~~~~~~~id~v~~ 68 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVAH-RSYVINMLDGDALRAVIEREKPDYIVP 68 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhhhCc-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence 589999 69999999999998 899999999876442111111 356678889998888777 5775543
No 385
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=93.43 E-value=0.093 Score=49.23 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChH-HHHHHHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPE-ETQAKLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~-~~~~~~~~~~~V~h~ 100 (396)
++++||+.| +||+...+++.|.++ ...+|++.+|.-.+. .....+++.+..|+.+++ .+++.++..|.|+.+
T Consensus 1 ~~~~vlllg-sg~v~~p~~d~ls~~----~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL 75 (445)
T KOG0172|consen 1 TKKGVLLLG-SGFVSRPVADFLSRK----KDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL 75 (445)
T ss_pred CCcceEEec-CccccchHHHHHhhc----CCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence 357899999 999999999999985 445788777753221 222245889999999998 888888888876665
No 386
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=93.11 E-value=0.47 Score=38.25 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=27.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
+++|+|.| .|-+|+.+++.|.. .|. +++.++.+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~-----~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLAR-----SGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHH-----HTTSEEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHH-----hCCCceeecCCc
Confidence 46899999 88899999999998 576 68888875
No 387
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=93.02 E-value=0.1 Score=45.03 Aligned_cols=35 Identities=29% Similarity=0.304 Sum_probs=28.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP 66 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 66 (396)
|++.|.| +|.||+.|+++|.+ .||+|+.-+|+.++
T Consensus 2 ~~~~i~G-tGniG~alA~~~a~-----ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAIIG-TGNIGSALALRLAK-----AGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEec-cChHHHHHHHHHHh-----CCCeEEEecCCChh
Confidence 3555555 99999999999999 89999988776543
No 388
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=93.02 E-value=0.059 Score=49.70 Aligned_cols=66 Identities=15% Similarity=0.091 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
.+++|+|+| .|.+|..+++.|.. .|.+|++.+|++.... ....+... .+.+++.+.+.++|.|+.+
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~-----~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSA-----LGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEEC
Confidence 468999999 58899999999998 7899999999764210 00011111 1234567778889977765
No 389
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=93.02 E-value=0.34 Score=49.35 Aligned_cols=68 Identities=13% Similarity=0.038 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
.+.|+|+|.| +|.+|..++..+.+ .|++|++++.++........ -..+.+|..|.+.+.++.+.+|.|
T Consensus 20 ~~~k~IgIIG-gGqlg~mla~aA~~-----lG~~Vi~ld~~~~apa~~~A-D~~~v~~~~D~~~l~~~a~~~dvI 87 (577)
T PLN02948 20 VSETVVGVLG-GGQLGRMLCQAASQ-----MGIKVKVLDPLEDCPASSVA-ARHVVGSFDDRAAVREFAKRCDVL 87 (577)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhC-ceeeeCCCCCHHHHHHHHHHCCEE
Confidence 4468999999 77999999999998 89999999887643211001 135568899999888888887754
No 390
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=92.83 E-value=0.17 Score=36.71 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=29.5
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
+|+|.| +|++|..++..|.+ .|.+|+.+.|.+.
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~-----~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAE-----LGKEVTLIERSDR 33 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHH-----TTSEEEEEESSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHH-----hCcEEEEEeccch
Confidence 578888 89999999999998 7889999999754
No 391
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.80 E-value=0.22 Score=45.83 Aligned_cols=55 Identities=24% Similarity=0.224 Sum_probs=44.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
..+|+|.|.|.+|.+|..++..|++ .|+.|++..|++. ++.+..+.+|.|+-+.+
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~-----~gatVtv~~~~t~--------------------~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQ-----AHCSVTVVHSRST--------------------DAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEECCCCC--------------------CHHHHHhcCCEEEEecC
Confidence 3578999999999999999999998 8999999876532 25566788887766644
No 392
>PLN02928 oxidoreductase family protein
Probab=92.78 E-value=0.18 Score=47.89 Aligned_cols=71 Identities=17% Similarity=0.110 Sum_probs=46.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC-----CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-----DHLVEYVQCDVSDPEETQAKLSQLTD 96 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~~~ 96 (396)
...+++|.|.| .|-||+.+++.|.. .|.+|++.+|........ ...+..+........+++++++.+|.
T Consensus 156 ~l~gktvGIiG-~G~IG~~vA~~l~a-----fG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi 229 (347)
T PLN02928 156 TLFGKTVFILG-YGAIGIELAKRLRP-----FGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI 229 (347)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence 34578999999 89999999999998 899999998863221000 00111111111134568889999996
Q ss_pred ee
Q 016047 97 VT 98 (396)
Q Consensus 97 V~ 98 (396)
|+
T Consensus 230 Vv 231 (347)
T PLN02928 230 VV 231 (347)
T ss_pred EE
Confidence 33
No 393
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.74 E-value=0.2 Score=46.83 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=30.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
++|.|.| +|.+|+.++..|.+ .||+|+..+|+.
T Consensus 5 m~I~iiG-~G~~G~~lA~~l~~-----~G~~V~~~~r~~ 37 (308)
T PRK14619 5 KTIAILG-AGAWGSTLAGLASA-----NGHRVRVWSRRS 37 (308)
T ss_pred CEEEEEC-ccHHHHHHHHHHHH-----CCCEEEEEeCCC
Confidence 5899998 89999999999998 799999999864
No 394
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=92.70 E-value=0.27 Score=46.91 Aligned_cols=64 Identities=17% Similarity=0.023 Sum_probs=48.4
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V 97 (396)
+|+|.|+ |.+|..++..+.+ .|++|++++..+........ -+.+.+|..|++.+.+..+.+|.|
T Consensus 1 ~igiiG~-gql~~~l~~aa~~-----lG~~v~~~d~~~~~p~~~~a-d~~~~~~~~d~~~i~~~a~~~dvi 64 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARP-----LGIKVHVLDPDANSPAVQVA-DHVVLAPFFDPAAIRELAESCDVI 64 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHH-----cCCEEEEECCCCCCChhHhC-ceeEeCCCCCHHHHHHHHhhCCEE
Confidence 4889995 8999999999998 89999999886543211001 124578899999999988888743
No 395
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=92.64 E-value=0.076 Score=49.24 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
.+++|+|.| .|.+|..++..|.. .|.+|++++|++.... ....+.+++ ..+++.+.++++|.|+++
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~-----~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKA-----LGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 468999999 58899999999998 7889999999864310 001122222 234567778889988776
No 396
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=92.59 E-value=0.26 Score=46.15 Aligned_cols=65 Identities=22% Similarity=0.152 Sum_probs=45.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
+..+|++.|.| .|-||+.+++.|.. -|.+|...+|.+.+... .....-..+ ++++++.+|. ++||
T Consensus 143 ~l~gktvGIiG-~GrIG~avA~r~~~-----Fgm~v~y~~~~~~~~~~--~~~~~~y~~------l~ell~~sDii~l~~ 208 (324)
T COG1052 143 DLRGKTLGIIG-LGRIGQAVARRLKG-----FGMKVLYYDRSPNPEAE--KELGARYVD------LDELLAESDIISLHC 208 (324)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCCChHHH--hhcCceecc------HHHHHHhCCEEEEeC
Confidence 34579999999 99999999999996 78999999998642110 111111222 5678888986 5555
No 397
>PRK06849 hypothetical protein; Provisional
Probab=92.52 E-value=0.17 Score=48.94 Aligned_cols=36 Identities=17% Similarity=0.102 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
.+|+|||||+...+|..+++.|.+ .|++|++++..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~-----~G~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHN-----AGHTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence 358999999999999999999999 899999998865
No 398
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=92.45 E-value=1.1 Score=38.83 Aligned_cols=34 Identities=26% Similarity=0.188 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
+.++|+|.| .|-+|+.++..|.. .|+ +|++++++
T Consensus 20 ~~~~V~IvG-~GglGs~ia~~La~-----~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICG-LGGLGSNVAINLAR-----AGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEECCC
Confidence 357999999 57799999999998 788 59999887
No 399
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.45 E-value=0.26 Score=45.16 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=44.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
..+++|+|+|+++.+|..++..|.+ +|..|+.+.++. .++.+.++.+|.|+...+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~-----~gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAvg 210 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQ-----KNASVTILHSRS--------------------KDMASYLKDADVIVSAVG 210 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHHhhCCEEEECCC
Confidence 3468999999999999999999998 788999887642 246677888997776644
No 400
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=92.40 E-value=0.24 Score=46.09 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
|+.+|.|.||||++|..|++.|.+.+ ..++..+..+
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp----~~~l~~~~s~ 36 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRS----DIELLSIPEA 36 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCC----CeEEEEEecC
Confidence 56799999999999999999999853 3366666644
No 401
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=92.31 E-value=0.22 Score=48.54 Aligned_cols=34 Identities=29% Similarity=0.326 Sum_probs=30.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
++|.|.| .|++|..++..|.+ .||+|+++++++.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~-----~G~~V~~~d~~~~ 34 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLAD-----LGHEVTGVDIDQE 34 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHh-----cCCeEEEEECCHH
Confidence 3799998 89999999999998 8999999998754
No 402
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=92.27 E-value=0.33 Score=46.17 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=25.2
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE---EEEEeC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVAR 62 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R 62 (396)
++|.|.||||++|..|++.|++. ..+. ++.++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~----~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEE----NDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhC----CCCCcCcEEEecc
Confidence 58999999999999999966653 3444 666654
No 403
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.20 E-value=0.34 Score=44.50 Aligned_cols=54 Identities=19% Similarity=0.154 Sum_probs=42.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
..+++|+|.|++|.+|+.++..|++ .|..|+++.|+. .++.+.++++|.|+++.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~-----~gatVtv~~~~t--------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLN-----ANATVTICHSRT--------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHh-----CCCEEEEEeCCc--------------------hhHHHHhccCCEEEEcc
Confidence 3568999999999999999999998 677888887631 23556678888877774
No 404
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=92.14 E-value=0.42 Score=44.65 Aligned_cols=62 Identities=19% Similarity=0.074 Sum_probs=45.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
.-.+|+|.|.| .|.||+.+++.|.. -|.+|++.+|..... ...+. ..+++++++.+|. ++|+
T Consensus 142 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fgm~V~~~d~~~~~~---~~~~~--------~~~l~ell~~sDvv~lh~ 204 (311)
T PRK08410 142 EIKGKKWGIIG-LGTIGKRVAKIAQA-----FGAKVVYYSTSGKNK---NEEYE--------RVSLEELLKTSDIISIHA 204 (311)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhh-----cCCEEEEECCCcccc---ccCce--------eecHHHHhhcCCEEEEeC
Confidence 34579999999 89999999999987 789999999853221 11111 2357788999986 4554
No 405
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=92.08 E-value=0.14 Score=44.01 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=26.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
|+|.|.| .||+|..++-.|.+ .||+|++++.++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~-----~G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAE-----KGHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHH-----TTSEEEEE-S-H
T ss_pred CEEEEEC-CCcchHHHHHHHHh-----CCCEEEEEeCCh
Confidence 5899998 99999999999999 899999999875
No 406
>PRK08655 prephenate dehydrogenase; Provisional
Probab=92.08 E-value=0.17 Score=49.73 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=31.7
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
|+|+|+||+|.+|..++..|.+ .|++|++++|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~-----~G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKE-----KGFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHH-----CCCEEEEEECChH
Confidence 4799999999999999999998 7899999998754
No 407
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.06 E-value=0.15 Score=48.16 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
-.+++|.|.| .|.||+.+++.|.. .|++|++.+|.+........++ . ..++.++++.+|.|+
T Consensus 148 L~gktvgIiG-~G~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~~~~~~~-----~---~~~l~ell~~aDiV~ 209 (333)
T PRK13243 148 VYGKTIGIIG-FGRIGQAVARRAKG-----FGMRILYYSRTRKPEAEKELGA-----E---YRPLEELLRESDFVS 209 (333)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCChhhHHHcCC-----E---ecCHHHHHhhCCEEE
Confidence 4578999999 79999999999998 7999999998643211000011 1 124667788888633
No 408
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=91.96 E-value=1 Score=39.05 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=30.2
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
..-++.+|+|.|+.| +|+++++.|.. .|. +++.++.+.
T Consensus 15 ~~L~~s~VlviG~gg-lGsevak~L~~-----~GVg~i~lvD~d~ 53 (198)
T cd01485 15 NKLRSAKVLIIGAGA-LGAEIAKNLVL-----AGIDSITIVDHRL 53 (198)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence 334567999999777 99999999998 576 488888763
No 409
>PLN02712 arogenate dehydrogenase
Probab=91.93 E-value=0.24 Score=51.31 Aligned_cols=53 Identities=25% Similarity=0.256 Sum_probs=43.7
Q ss_pred cccccccccccccCcCC-----CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 6 AGAIGAARKFEEDEPAR-----SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
-|..++++.|+.+.+.. .++++|.|.| .|.+|..+++.|.+ .|++|++.+|+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~kIgIIG-lG~mG~slA~~L~~-----~G~~V~~~dr~~ 402 (667)
T PLN02712 345 MRFQGVAQKYEYNAQVSGCVNDGSKLKIAIVG-FGNFGQFLAKTMVK-----QGHTVLAYSRSD 402 (667)
T ss_pred hhhhcccCCCCccchhhhccCCCCCCEEEEEe-cCHHHHHHHHHHHH-----CcCEEEEEECCh
Confidence 46788889888766542 2458999999 89999999999998 789999999874
No 410
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.91 E-value=0.25 Score=52.70 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=76.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC---------CCCCCCee--EEEecCCChHHHHHHHhc
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WNADHLVE--YVQCDVSDPEETQAKLSQ 93 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~~~~~v~--~~~~Dl~d~~~~~~~~~~ 93 (396)
|..+|+||-|-.|-.|+.-|.. +|.+ ++..+|..-.. | ...+++ +-.-|++..+..+.++..
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~-----RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQ-----RGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHh-----cCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHHHH
Confidence 7899999999999999999999 7876 55555654321 2 123443 445666666655555555
Q ss_pred CC------CeeEEEEeccC---C-C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047 94 LT------DVTHIFYVTWT---N-R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144 (396)
Q Consensus 94 ~~------~V~h~a~~~~~---~-~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~ 144 (396)
+. .|||+|+.-.. . + .+..+..+.-+.||.||=...++..+.+.+|+..||
T Consensus 1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSS 1905 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSS 1905 (2376)
T ss_pred hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEe
Confidence 43 49999764221 1 1 144556678889999988888888777888775543
No 411
>PRK07877 hypothetical protein; Provisional
Probab=91.80 E-value=0.31 Score=50.66 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=32.8
Q ss_pred cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCC
Q 016047 14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARR 63 (396)
Q Consensus 14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~ 63 (396)
+|...+..--.+.+|+|.|. | +|++++..|.. .|. ++++++.+
T Consensus 96 ~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~Lar-----aGvvG~l~lvD~D 140 (722)
T PRK07877 96 KITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAA-----EGLCGELRLADFD 140 (722)
T ss_pred hCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHH-----ccCCCeEEEEcCC
Confidence 45544444445689999998 8 99999999997 563 68888875
No 412
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=91.76 E-value=0.17 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.7
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
++|.|+| +|.+|+.++..|.+ .|++|++++|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFAR-----AGHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHH-----CCCeeEEEeCCH
Confidence 4799999 99999999999999 899999999975
No 413
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=91.66 E-value=0.29 Score=42.53 Aligned_cols=37 Identities=24% Similarity=0.123 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
..+|+|+|+| .|.+|+++++.|.+ .|++|++.++++.
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~-----~G~~Vvv~D~~~~ 62 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLE-----EGAKLIVADINEE 62 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCHH
Confidence 3458999999 58999999999998 8999998887653
No 414
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=91.62 E-value=0.24 Score=46.93 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=26.7
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 62 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 62 (396)
++|.|+||||++|++|++.|.+. ...+|..+.+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~----~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH----PYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC----CCceEEEEEE
Confidence 47999999999999999999873 2357777743
No 415
>PRK06436 glycerate dehydrogenase; Provisional
Probab=91.61 E-value=0.48 Score=44.07 Aligned_cols=60 Identities=17% Similarity=0.126 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
...+++|.|.| .|.||+.+++.|.. .|++|++.+|.... .++... ..+++++++.+|.|+
T Consensus 119 ~L~gktvgIiG-~G~IG~~vA~~l~a-----fG~~V~~~~r~~~~-----~~~~~~------~~~l~ell~~aDiv~ 178 (303)
T PRK06436 119 LLYNKSLGILG-YGGIGRRVALLAKA-----FGMNIYAYTRSYVN-----DGISSI------YMEPEDIMKKSDFVL 178 (303)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCcc-----cCcccc------cCCHHHHHhhCCEEE
Confidence 44579999999 89999999998876 79999999986432 121110 124677888898633
No 416
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=91.50 E-value=0.88 Score=45.82 Aligned_cols=98 Identities=8% Similarity=0.036 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCC-CCC-----------CCCCCeeEEEecCCChHHHHHH
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK-PNW-----------NADHLVEYVQCDVSDPEETQAK 90 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~-~~~-----------~~~~~v~~~~~Dl~d~~~~~~~ 90 (396)
...+|+|.| .|-+|++++..|++ .|. ++++++-+.. .+. .-++++.+-..|..+.+++.+.
T Consensus 128 R~akVlVlG-~Gg~~s~lv~sL~~-----sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev 201 (637)
T TIGR03693 128 RNAKILAAG-SGDFLTKLVRSLID-----SGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEA 201 (637)
T ss_pred hcccEEEEe-cCchHHHHHHHHHh-----cCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHh
Confidence 557999999 66679999999998 565 4767754321 110 0135666667777788899999
Q ss_pred HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047 91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC 140 (396)
Q Consensus 91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~ 140 (396)
+++.|.|++++- .. +...+..+.++|.+.+..+.-++
T Consensus 202 ~~~~DiVi~vsD-----dy--------~~~~Lr~lN~acvkegk~~IPai 238 (637)
T TIGR03693 202 FEPADWVLYVSD-----NG--------DIDDLHALHAFCKEEGKGFIPAI 238 (637)
T ss_pred hcCCcEEEEECC-----CC--------ChHHHHHHHHHHHHcCCCeEEEE
Confidence 999998888732 11 11223346667777654444444
No 417
>PLN02256 arogenate dehydrogenase
Probab=91.45 E-value=0.3 Score=45.43 Aligned_cols=54 Identities=28% Similarity=0.273 Sum_probs=41.1
Q ss_pred ccccccccccccccCcC-----CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 5 WAGAIGAARKFEEDEPA-----RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-----~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
+-|++.+++-|+-+.+- ..+.++|.|.| .|.+|..++..|.+ .|++|++++|+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G~mG~slA~~L~~-----~G~~V~~~d~~~ 69 (304)
T PLN02256 11 RVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FGNFGQFLAKTFVK-----QGHTVLATSRSD 69 (304)
T ss_pred ccccccccCCCChHhHHhHhhccCCCCEEEEEe-eCHHHHHHHHHHHh-----CCCEEEEEECcc
Confidence 34667777777644322 22346999999 79999999999998 788999999875
No 418
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=91.45 E-value=0.3 Score=46.79 Aligned_cols=61 Identities=20% Similarity=0.062 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
-.+++|.|.| .|.||+.+++.|.. -|.+|++.++.... .. +-....+++++++.+|. ++|+
T Consensus 114 L~gktvGIIG-~G~IG~~vA~~l~a-----~G~~V~~~dp~~~~-----~~------~~~~~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 114 LHDRTVGIVG-VGNVGRRLQARLEA-----LGIKTLLCDPPRAD-----RG------DEGDFRSLDELVQEADILTFHT 175 (378)
T ss_pred cCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCcccc-----cc------cccccCCHHHHHhhCCEEEEeC
Confidence 4568999999 89999999999998 79999998753211 00 00112357778888986 4455
No 419
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=91.39 E-value=0.22 Score=47.19 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
|.++|.|.| +|.+|+.++..|.+ .||+|++++|++
T Consensus 1 ~~mkI~IiG-~G~mG~~~A~~L~~-----~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLG-AGSIGCYLGGRLAA-----AGADVTLIGRAR 35 (341)
T ss_pred CCceEEEEC-CCHHHHHHHHHHHh-----cCCcEEEEecHH
Confidence 457899998 99999999999998 799999999864
No 420
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=91.35 E-value=0.69 Score=43.45 Aligned_cols=67 Identities=16% Similarity=0.090 Sum_probs=51.8
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
++|.|.| .|.+|+-++.+-.. -|++|+.++-.++..... ---.++..+..|+++++++...||.|..
T Consensus 2 ~tvgIlG-GGQLgrMm~~aa~~-----lG~~v~vLdp~~~~PA~~-va~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 2 KTVGILG-GGQLGRMMALAAAR-----LGIKVIVLDPDADAPAAQ-VADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CeEEEEc-CcHHHHHHHHHHHh-----cCCEEEEecCCCCCchhh-cccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 6899999 89999999998887 799999999765432100 0114677888899999999999996443
No 421
>PRK06487 glycerate dehydrogenase; Provisional
Probab=91.33 E-value=0.37 Score=45.14 Aligned_cols=60 Identities=15% Similarity=0.100 Sum_probs=44.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
...+|+|.|.| .|.||+.+++.|.. -|.+|++.+|.... .... ..+++++++.+|. ++|+
T Consensus 145 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fgm~V~~~~~~~~~-----~~~~--------~~~l~ell~~sDiv~l~l 205 (317)
T PRK06487 145 ELEGKTLGLLG-HGELGGAVARLAEA-----FGMRVLIGQLPGRP-----ARPD--------RLPLDELLPQVDALTLHC 205 (317)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCCc-----cccc--------ccCHHHHHHhCCEEEECC
Confidence 34578999999 89999999999987 79999999875321 1111 1247788999986 4444
No 422
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=91.32 E-value=0.38 Score=45.13 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=45.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
.-.+|++-|.| .|.||+.+++.|.. -|.+|++.++........ .... ...+++++.++.+|. ++|+
T Consensus 139 el~gkTvGIiG-~G~IG~~va~~l~a-----fgm~v~~~d~~~~~~~~~--~~~~-----~~~~~Ld~lL~~sDiv~lh~ 205 (324)
T COG0111 139 ELAGKTVGIIG-LGRIGRAVAKRLKA-----FGMKVIGYDPYSPRERAG--VDGV-----VGVDSLDELLAEADILTLHL 205 (324)
T ss_pred cccCCEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEECCCCchhhhc--cccc-----eecccHHHHHhhCCEEEEcC
Confidence 34579999999 99999999999998 899999999843321110 0001 112357788888886 4444
No 423
>PRK07574 formate dehydrogenase; Provisional
Probab=91.28 E-value=0.22 Score=47.77 Aligned_cols=64 Identities=19% Similarity=0.031 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
..+|+|.|.| .|.||+.+++.|.. .|.+|++.+|........ .. .++.-..+++++++.+|.|+
T Consensus 190 L~gktVGIvG-~G~IG~~vA~~l~~-----fG~~V~~~dr~~~~~~~~-~~-----~g~~~~~~l~ell~~aDvV~ 253 (385)
T PRK07574 190 LEGMTVGIVG-AGRIGLAVLRRLKP-----FDVKLHYTDRHRLPEEVE-QE-----LGLTYHVSFDSLVSVCDVVT 253 (385)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCCchhhH-hh-----cCceecCCHHHHhhcCCEEE
Confidence 3568999999 89999999999998 799999999865221000 00 11111234677889999643
No 424
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=91.19 E-value=1 Score=39.99 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=28.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
-++++|+|.| .|-+|+++++.|.. .|. ++++++.+
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~-----~Gvg~i~lvD~D 54 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAA-----AGVGKLGLVDDD 54 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence 3467999999 88899999999998 566 57777764
No 425
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=91.19 E-value=0.39 Score=44.45 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=25.7
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA 61 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~ 61 (396)
+|.|.|||||.|..|++.|...| ..++..+.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~HP----~~el~~l~ 33 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGRD----DIELLSIA 33 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCCC----CeEEEEEe
Confidence 79999999999999999999853 34666554
No 426
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=91.19 E-value=0.69 Score=40.27 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=30.6
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
..-.+++|+|.| .|-+|+.+++.|.. .|. ++++++++
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~-----~Gv~~i~lvD~d 54 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAG-----AGVGTIVIVDDD 54 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEecCC
Confidence 333467999999 88899999999998 676 68888876
No 427
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=91.16 E-value=0.38 Score=40.92 Aligned_cols=64 Identities=25% Similarity=0.248 Sum_probs=42.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
...+++|.|.| .|-||+.+++.|.. -|.+|++.+|...... .....+ ...+++++++.+|.|+.
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~~~~--------~~~~l~ell~~aDiv~~ 97 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKA-----FGMRVIGYDRSPKPEEGADEFGV--------EYVSLDELLAQADIVSL 97 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHH-----TT-EEEEEESSCHHHHHHHHTTE--------EESSHHHHHHH-SEEEE
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeec-----CCceeEEecccCChhhhcccccc--------eeeehhhhcchhhhhhh
Confidence 34578999999 89999999999998 8999999999864311 000011 11245677888886433
No 428
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=90.77 E-value=0.39 Score=46.11 Aligned_cols=61 Identities=21% Similarity=0.165 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
..+++|.|.| .|.||+.+++.|.. -|++|++.++..... .... ...+++++++.+|. ++|+
T Consensus 114 l~gktvGIIG-~G~IG~~va~~l~a-----~G~~V~~~Dp~~~~~---~~~~--------~~~~l~ell~~aDiV~lh~ 175 (381)
T PRK00257 114 LAERTYGVVG-AGHVGGRLVRVLRG-----LGWKVLVCDPPRQEA---EGDG--------DFVSLERILEECDVISLHT 175 (381)
T ss_pred cCcCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCccccc---ccCc--------cccCHHHHHhhCCEEEEeC
Confidence 3468999999 89999999999998 899999988632211 0111 11246778888986 4555
No 429
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=90.77 E-value=0.23 Score=47.60 Aligned_cols=71 Identities=13% Similarity=0.021 Sum_probs=50.3
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
+.+|+|+|+ |-+|...++.|.. .|.+|++++|++.... .....-..+..+..+++.+.+.+..+|.|+.++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~-----lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANG-----LGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 467999985 9999999999998 7889999998753210 000000123445667788888899999887764
No 430
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.74 E-value=0.52 Score=43.49 Aligned_cols=53 Identities=17% Similarity=0.158 Sum_probs=42.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
..+|+|.|.|.+|.+|..++..|++ .|+.|++.. |.. ++.++.+.+|.|+-+.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~-----~g~tVtv~~~rT~---------------------~l~e~~~~ADIVIsav 209 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLA-----ANATVTIAHSRTR---------------------DLPAVCRRADILVAAV 209 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHh-----CCCEEEEECCCCC---------------------CHHHHHhcCCEEEEec
Confidence 4579999999999999999999998 899999884 431 1456677888666653
No 431
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=90.61 E-value=0.31 Score=45.91 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
..+++|.|.| .|.||+.+++.|.. .|++|++.+|.+.... . ... -..++.++++.+|.|+
T Consensus 144 l~g~~VgIIG-~G~IG~~vA~~L~~-----~G~~V~~~d~~~~~~~---~---~~~----~~~~l~ell~~aDiVi 203 (330)
T PRK12480 144 VKNMTVAIIG-TGRIGAATAKIYAG-----FGATITAYDAYPNKDL---D---FLT----YKDSVKEAIKDADIIS 203 (330)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCChhHhh---h---hhh----ccCCHHHHHhcCCEEE
Confidence 3567999999 89999999999988 7999999998754311 0 111 1124677888998633
No 432
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=90.45 E-value=2.3 Score=37.91 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=55.2
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCC--CeeEEEE
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLT--DVTHIFY 102 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~--~V~h~a~ 102 (396)
.++|||.|||+= +..|+++|.. .+..++..+-......+..+....+.+-..+.+.+.+.++... .|+..
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~-----~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDA-- 73 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAA-----APVDIILSSLTGYGAKLAEQIGPVRVGGFLGAEGLAAFLREEGIDLLIDA-- 73 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhc-----cCccEEEEEcccccccchhccCCeeecCcCCHHHHHHHHHHcCCCEEEEC--
Confidence 468999999998 8999999998 4433333332211111111222356677788888888887654 23333
Q ss_pred eccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047 103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNA 133 (396)
Q Consensus 103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~ 133 (396)
+++. -..-++|.+++|+..+
T Consensus 74 -THPy----------Aa~iS~Na~~aake~g 93 (257)
T COG2099 74 -THPY----------AARISQNAARAAKETG 93 (257)
T ss_pred -CChH----------HHHHHHHHHHHHHHhC
Confidence 2221 1245678999999876
No 433
>PLN02735 carbamoyl-phosphate synthase
Probab=90.44 E-value=0.87 Score=50.06 Aligned_cols=79 Identities=13% Similarity=0.137 Sum_probs=48.9
Q ss_pred cccCcCCCCCCEEEEEcCCCh----------hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH
Q 016047 16 EEDEPARSYQSVALIVGVTGI----------VGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 85 (396)
Q Consensus 16 ~~~~~~~~~~~~iLVtGatGf----------iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~ 85 (396)
-+.+|...+-|||||+|+... .|..+++.|.+ .|++|++++.++........-.+.+..+..+++
T Consensus 14 ~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke-----~G~~Vi~vd~np~t~~~~~~~aD~~yi~p~~~e 88 (1102)
T PLN02735 14 ATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKE-----EGYEVVLINSNPATIMTDPETADRTYIAPMTPE 88 (1102)
T ss_pred cccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHH-----cCCEEEEEeCCcccccCChhhCcEEEeCCCCHH
Confidence 344445555689999996542 38889999999 899999999876432111111122334555677
Q ss_pred HHHHHHhc--CCCeeE
Q 016047 86 ETQAKLSQ--LTDVTH 99 (396)
Q Consensus 86 ~~~~~~~~--~~~V~h 99 (396)
.+.+.++. +|.|+.
T Consensus 89 ~v~~ii~~e~~D~Iip 104 (1102)
T PLN02735 89 LVEQVIAKERPDALLP 104 (1102)
T ss_pred HHHHHHHHhCCCEEEE
Confidence 77665554 444443
No 434
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=90.40 E-value=0.19 Score=43.84 Aligned_cols=37 Identities=16% Similarity=0.312 Sum_probs=32.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP 66 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~ 66 (396)
-+++.+.|++||+|..++..+.. .||+|.-+.|+...
T Consensus 2 i~k~~vfgg~gflg~~ic~~a~~-----sgy~vvsvsrsgas 38 (283)
T KOG4288|consen 2 IPKLIVFGGNGFLGKRICQEAVT-----SGYQVVSVSRSGAS 38 (283)
T ss_pred CccceeecccccchhhhhHHHHh-----cCceEEEeccccCC
Confidence 45789999999999999999998 79999999998654
No 435
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=90.17 E-value=0.38 Score=38.41 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=26.8
Q ss_pred EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047 28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 62 (396)
Q Consensus 28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 62 (396)
|.|.|+||-||+..++-+.+.+ ..++|++++=
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~---d~f~v~~Lsa 32 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHP---DKFEVVALSA 32 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCC---CceEEEEEEc
Confidence 6899999999999999888743 4588988874
No 436
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=90.12 E-value=0.43 Score=44.70 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
..++|+|.| +|-+|+.++..|.+ .|++|+++.|++
T Consensus 4 ~~m~I~IiG-~GaiG~~lA~~L~~-----~g~~V~~~~r~~ 38 (313)
T PRK06249 4 ETPRIGIIG-TGAIGGFYGAMLAR-----AGFDVHFLLRSD 38 (313)
T ss_pred cCcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEeCC
Confidence 346899998 89999999999998 799999999975
No 437
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=90.08 E-value=1.6 Score=39.11 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
...+|+|.| .|-+|+.++..|.. .|. ++++++++.
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La~-----~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLAA-----AGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCc
Confidence 357899999 78899999999998 565 588888764
No 438
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=89.98 E-value=0.88 Score=42.33 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=44.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEE-----ecCCChHHHHHHHhcCCCe
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQ-----CDVSDPEETQAKLSQLTDV 97 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~-----~Dl~d~~~~~~~~~~~~~V 97 (396)
++|.|.| +|--|++|+..|.+ +||+|+.-.|++... .. ...+.+++. ..+.-..++.++++++|.|
T Consensus 2 ~kI~ViG-aGswGTALA~~la~-----ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i 75 (329)
T COG0240 2 MKIAVIG-AGSWGTALAKVLAR-----NGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII 75 (329)
T ss_pred ceEEEEc-CChHHHHHHHHHHh-----cCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence 5899999 77779999999999 789999999975321 00 112223333 2222234678888888854
Q ss_pred e
Q 016047 98 T 98 (396)
Q Consensus 98 ~ 98 (396)
+
T Consensus 76 v 76 (329)
T COG0240 76 V 76 (329)
T ss_pred E
Confidence 3
No 439
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=89.97 E-value=1.5 Score=38.06 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=29.8
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
..-+.++|+|.|+.| +|+++++.|.. .|. +++.++.+.
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~-----~GVg~i~lvD~d~ 55 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVL-----SGIGSLTILDDRT 55 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence 333467999999666 99999999998 676 488888653
No 440
>PRK06932 glycerate dehydrogenase; Provisional
Probab=89.91 E-value=0.58 Score=43.81 Aligned_cols=61 Identities=15% Similarity=0.071 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
...+++|.|.| .|.||+.+++.|.. -|.+|++.+|..... . +. ...+++++++.+|. ++|+
T Consensus 144 ~l~gktvgIiG-~G~IG~~va~~l~~-----fg~~V~~~~~~~~~~------~-----~~-~~~~l~ell~~sDiv~l~~ 205 (314)
T PRK06932 144 DVRGSTLGVFG-KGCLGTEVGRLAQA-----LGMKVLYAEHKGASV------C-----RE-GYTPFEEVLKQADIVTLHC 205 (314)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCcccc------c-----cc-ccCCHHHHHHhCCEEEEcC
Confidence 34578999999 89999999999987 799999987643211 0 00 12357888999996 4454
No 441
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=89.79 E-value=1 Score=38.55 Aligned_cols=76 Identities=22% Similarity=0.186 Sum_probs=47.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCC-hHHHHHHHhcCCCeeEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~~V~h~a 101 (396)
..+|+|+|.|.+.-+|..|+..|++ +|..|+.++.+...................| +..+.+.++.+|.|+-.+
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~-----~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAv 134 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLAN-----DGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGV 134 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHH-----CCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEcc
Confidence 4578999999999999999999998 7889998864432111000000111111112 224677888899776665
Q ss_pred Ee
Q 016047 102 YV 103 (396)
Q Consensus 102 ~~ 103 (396)
+.
T Consensus 135 G~ 136 (197)
T cd01079 135 PS 136 (197)
T ss_pred CC
Confidence 43
No 442
>PRK06444 prephenate dehydrogenase; Provisional
Probab=89.78 E-value=0.36 Score=41.77 Aligned_cols=28 Identities=32% Similarity=0.520 Sum_probs=25.9
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY 58 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~ 58 (396)
++|.|.||+|-+|+.+++.|.+ .||.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~-----~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDD-----NGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHh-----CCCEEE
Confidence 4899999999999999999998 799986
No 443
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=89.76 E-value=1.6 Score=39.23 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
.+++|+|.|+ |-+|+.+++.|.. .|. ++++++.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~-----~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAA-----AGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence 4579999995 9999999999998 565 58888765
No 444
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=89.52 E-value=0.49 Score=44.87 Aligned_cols=76 Identities=16% Similarity=0.039 Sum_probs=45.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh----cCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTD 96 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~ 96 (396)
.+.++.|||.||+|-+|++.+..+.. .+ ..|++........+...-+ .-...|..+++-.+...+ ++|.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~-----~~~~~v~t~~s~e~~~l~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~Dv 228 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKH-----AGAIKVVTACSKEKLELVKKLG-ADEVVDYKDENVVELIKKYTGKGVDV 228 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHh-----cCCcEEEEEcccchHHHHHHcC-CcEeecCCCHHHHHHHHhhcCCCccE
Confidence 34567999999999999999988876 56 3444444332211110011 123567777654444333 3677
Q ss_pred eeEEEEe
Q 016047 97 VTHIFYV 103 (396)
Q Consensus 97 V~h~a~~ 103 (396)
|++|++.
T Consensus 229 VlD~vg~ 235 (347)
T KOG1198|consen 229 VLDCVGG 235 (347)
T ss_pred EEECCCC
Confidence 8887653
No 445
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=89.47 E-value=1.3 Score=42.19 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
.-++.+|||.| .|-+|+.++..|.. .|. ++++++.+.
T Consensus 25 ~L~~~~VlivG-~GGlGs~~a~~La~-----~Gvg~i~lvD~D~ 62 (355)
T PRK05597 25 SLFDAKVAVIG-AGGLGSPALLYLAG-----AGVGHITIIDDDT 62 (355)
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence 33567999999 68899999999998 676 588888763
No 446
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=89.46 E-value=0.4 Score=46.81 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=31.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
++|.|.| .|++|..++..|.+ .||+|+++++++.
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La~-----~G~~V~~~D~~~~ 37 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFAS-----RQKQVIGVDINQH 37 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHHh-----CCCEEEEEeCCHH
Confidence 6899998 89999999999998 8999999999764
No 447
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=89.35 E-value=0.53 Score=44.48 Aligned_cols=23 Identities=35% Similarity=0.524 Sum_probs=21.1
Q ss_pred CCEEEEEcCCChhHHHHHHHcCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPL 47 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~ 47 (396)
+.+|.|.||||++|..|++.|.+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~ 27 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEK 27 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH
Confidence 36899999999999999999985
No 448
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=89.33 E-value=0.49 Score=46.00 Aligned_cols=62 Identities=19% Similarity=0.105 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
-.+|+|.|.| .|.||+.+++.|.. -|.+|++.+|.+.... ..+. ...+++++++.+|. ++|+
T Consensus 149 L~gktvGIiG-~G~IG~~vA~~~~~-----fGm~V~~~d~~~~~~~---~~~~-------~~~~l~ell~~sDiVslh~ 211 (409)
T PRK11790 149 VRGKTLGIVG-YGHIGTQLSVLAES-----LGMRVYFYDIEDKLPL---GNAR-------QVGSLEELLAQSDVVSLHV 211 (409)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCccccc---CCce-------ecCCHHHHHhhCCEEEEcC
Confidence 4578999999 89999999999988 8999999997532210 1111 12257788888986 4454
No 449
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=89.29 E-value=0.5 Score=38.17 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=45.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT 95 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 95 (396)
...+++++|.|| |-.|+.++..|.+ .|.+ |+++.|..... ......+++ .++. ++.+.+..+|
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~-----~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~--~~~~---~~~~~~~~~D 77 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAA-----LGAKEITIVNRTPERAEALAEEFGGVNIEA--IPLE---DLEEALQEAD 77 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHH-----TTSSEEEEEESSHHHHHHHHHHHTGCSEEE--EEGG---GHCHHHHTES
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHH-----cCCCEEEEEECCHHHHHHHHHHcCccccce--eeHH---HHHHHHhhCC
Confidence 334689999995 8899999999998 6765 99999975431 001112333 3333 3446678888
Q ss_pred CeeEE
Q 016047 96 DVTHI 100 (396)
Q Consensus 96 ~V~h~ 100 (396)
.|+++
T Consensus 78 ivI~a 82 (135)
T PF01488_consen 78 IVINA 82 (135)
T ss_dssp EEEE-
T ss_pred eEEEe
Confidence 88877
No 450
>PRK08328 hypothetical protein; Provisional
Probab=89.23 E-value=2.2 Score=37.99 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
.-++.+|+|.| +|-+|++++..|.. .|. ++++++.+
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~-----~Gvg~i~lvD~D 60 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAA-----AGVGRILLIDEQ 60 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence 33467999999 78889999999998 565 58888765
No 451
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=89.19 E-value=1.3 Score=36.03 Aligned_cols=54 Identities=26% Similarity=0.251 Sum_probs=42.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
..+|+|+|.|.+.-+|..|+..|.+ +|..|+.+.++.. ++++.++.+|.|+-..
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~-----~gatV~~~~~~t~--------------------~l~~~v~~ADIVvsAt 79 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQR-----DGATVYSCDWKTI--------------------QLQSKVHDADVVVVGS 79 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeCCCCc--------------------CHHHHHhhCCEEEEec
Confidence 3468999999999999999999998 7889988875431 2456778888655553
No 452
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=89.14 E-value=0.23 Score=48.47 Aligned_cols=67 Identities=19% Similarity=0.092 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
..+++|+|.|+ |-+|..++..|.. .| .+|++++|..... ....-+... .+.+++.+++.++|.|+-
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~-----~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~ 246 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLR-----KGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVIS 246 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEE
Confidence 34589999995 9999999999988 67 6899999976432 100001111 123466777888887666
Q ss_pred E
Q 016047 100 I 100 (396)
Q Consensus 100 ~ 100 (396)
+
T Consensus 247 a 247 (417)
T TIGR01035 247 S 247 (417)
T ss_pred C
Confidence 6
No 453
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=89.13 E-value=0.83 Score=34.93 Aligned_cols=35 Identities=26% Similarity=0.159 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
.+++|||+|| |-+|..=++.|++ .|.+|+.++...
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~-----~gA~v~vis~~~ 40 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLE-----AGAKVTVISPEI 40 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCC-----CTBEEEEEESSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEECCch
Confidence 4689999995 9999999999999 789999999873
No 454
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=89.12 E-value=0.55 Score=38.66 Aligned_cols=36 Identities=25% Similarity=0.148 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK 65 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 65 (396)
.+++|+|+|+ |.+|..+++.|.+ .| ++|++++|++.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~-----~g~~~v~v~~r~~~ 54 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAE-----LGAAKIVIVNRTLE 54 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEcCCHH
Confidence 3579999996 9999999999987 54 78999998753
No 455
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=88.97 E-value=0.64 Score=46.88 Aligned_cols=64 Identities=23% Similarity=0.186 Sum_probs=44.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
-.+|+|.|.| .|.||+.+++.|.. .|++|++.+|..........+++.. ++.++++.+|. ++|+
T Consensus 138 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~~--------~l~ell~~aDiV~l~l 202 (526)
T PRK13581 138 LYGKTLGIIG-LGRIGSEVAKRAKA-----FGMKVIAYDPYISPERAAQLGVELV--------SLDELLARADFITLHT 202 (526)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEEE--------cHHHHHhhCCEEEEcc
Confidence 3568999999 89999999999998 8999999998542211111122221 36677888886 3443
No 456
>PLN03139 formate dehydrogenase; Provisional
Probab=88.97 E-value=0.45 Score=45.75 Aligned_cols=64 Identities=17% Similarity=0.049 Sum_probs=44.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047 22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVT 98 (396)
Q Consensus 22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~ 98 (396)
...+++|.|.| .|.||+.+++.|.. .|.+|++.+|..... .....++. -.++++++++.+|.|+
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~a-----fG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~ 260 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKP-----FNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVV 260 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEE
Confidence 34578999999 89999999999998 799999988864221 10001111 1124677888898633
No 457
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=88.94 E-value=0.68 Score=38.53 Aligned_cols=32 Identities=25% Similarity=0.135 Sum_probs=28.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 62 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 62 (396)
+++|+|.| .|-+|...++.|++ .|++|++++.
T Consensus 13 ~~~vlVvG-GG~va~rka~~Ll~-----~ga~V~VIsp 44 (157)
T PRK06719 13 NKVVVIIG-GGKIAYRKASGLKD-----TGAFVTVVSP 44 (157)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcC
Confidence 58999999 89999999999999 7999998853
No 458
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.93 E-value=0.62 Score=42.87 Aligned_cols=73 Identities=14% Similarity=0.059 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF 101 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a 101 (396)
.+++|-|+|+.| +|+-=++.-.. -|++|+++++...+. ....-+.+.+..-..|++.++++....|.++|.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKA-----MG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKA-----MGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHH-----hCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence 458999999999 99877776666 799999999986321 1111244444444448888888888788888876
Q ss_pred E
Q 016047 102 Y 102 (396)
Q Consensus 102 ~ 102 (396)
.
T Consensus 255 ~ 255 (360)
T KOG0023|consen 255 S 255 (360)
T ss_pred e
Confidence 5
No 459
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=88.90 E-value=0.23 Score=48.59 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=45.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
..+++|+|.| +|-+|..++..|.. .|. +|++++|.+.........+ .++..+.+++.+.+.++|.|+.+
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~-----~G~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAE-----KGVRKITVANRTLERAEELAEEF---GGEAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHH-----CCCCeEEEEeCCHHHHHHHHHHc---CCcEeeHHHHHHHhccCCEEEEC
Confidence 3457999999 59999999999987 676 7999998754321000011 11223335566778888877766
No 460
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=88.80 E-value=0.38 Score=41.05 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=28.2
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
+|.|.|| |.+|+.++..++. .|++|+.+++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~-----~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFAR-----AGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHH-----TTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence 6899995 9999999999998 7999999998753
No 461
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=88.76 E-value=0.49 Score=35.44 Aligned_cols=62 Identities=23% Similarity=0.195 Sum_probs=39.2
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEE-eCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGV-ARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l-~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
||.|.| +|.+|..|++.|++ .| ++|+.. +|++... +...-++.+...| ..++++.+|.|+-+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~-----~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLA-----SGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILA 68 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHH-----TTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----CCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEE
Confidence 578886 99999999999998 67 899955 7776432 1001122233222 34566778866555
No 462
>PLN02306 hydroxypyruvate reductase
Probab=88.67 E-value=0.58 Score=45.06 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCC
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~ 64 (396)
-.+++|.|.| .|.||+.+++.|. . -|.+|++.+|..
T Consensus 163 L~gktvGIiG-~G~IG~~vA~~l~~~-----fGm~V~~~d~~~ 199 (386)
T PLN02306 163 LKGQTVGVIG-AGRIGSAYARMMVEG-----FKMNLIYYDLYQ 199 (386)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhc-----CCCEEEEECCCC
Confidence 4578999999 9999999999986 5 688999999864
No 463
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=88.63 E-value=2.9 Score=33.93 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=26.9
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
+|+|.| .|-+|+.+++.|.. .|+ ++++++.+.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~-----~Gv~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLAR-----SGVGKITLIDFDT 33 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEEcCCC
Confidence 589999 59999999999998 677 588888653
No 464
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=88.29 E-value=0.67 Score=42.56 Aligned_cols=37 Identities=19% Similarity=0.014 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCC
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK 65 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~ 65 (396)
..++++||+|+ |-+|+.++..|.. .| .+|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~-----~g~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLD-----LGVAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHH-----cCCCEEEEEeCCHH
Confidence 34579999995 9999999999998 67 68999999753
No 465
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=88.23 E-value=0.25 Score=46.20 Aligned_cols=69 Identities=16% Similarity=0.108 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
.+++|+|.|+ |-+|..+++.|... .+.+|++++|.+.........+ .++..+.+++.+.+..+|.|+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~----g~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAK----GVAEITIANRTYERAEELAKEL---GGNAVPLDELLELLNEADVVISA 245 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHc---CCeEEeHHHHHHHHhcCCEEEEC
Confidence 4579999995 99999999999872 3467999999764320000011 11222334567778888877666
No 466
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=88.18 E-value=0.5 Score=44.86 Aligned_cols=71 Identities=14% Similarity=0.014 Sum_probs=46.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCee-EEEec-----CCChHHHHHHH
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVE-YVQCD-----VSDPEETQAKL 91 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~-~~~~D-----l~d~~~~~~~~ 91 (396)
|+|-|.| +||+|.-..-.|.+ .||+|+|++.++.+. . ...++++ +++-+ +.-..+.++++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~-----~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~ 74 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAE-----LGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV 74 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence 5899999 99999999999998 899999999875321 0 0112222 11111 22223457788
Q ss_pred hcCCCeeEEEE
Q 016047 92 SQLTDVTHIFY 102 (396)
Q Consensus 92 ~~~~~V~h~a~ 102 (396)
++.|.+|-+.+
T Consensus 75 ~~adv~fIavg 85 (414)
T COG1004 75 KDADVVFIAVG 85 (414)
T ss_pred hcCCEEEEEcC
Confidence 88887666643
No 467
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=88.16 E-value=1.1 Score=37.39 Aligned_cols=55 Identities=20% Similarity=0.100 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
..+|+|+|.|.++.+|..|+..|.+ +|..|+.+.... .++++.++.+|.|+-.++
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~-----~~atVt~~h~~T--------------------~~l~~~~~~ADIVVsa~G 88 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLN-----KGATVTICHSKT--------------------KNLQEITRRADIVVSAVG 88 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHH-----TT-EEEEE-TTS--------------------SSHHHHHTTSSEEEE-SS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHh-----CCCeEEeccCCC--------------------CcccceeeeccEEeeeec
Confidence 4568999999999999999999998 788888765542 124667788887666543
No 468
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=88.04 E-value=0.99 Score=42.42 Aligned_cols=64 Identities=17% Similarity=0.038 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
-.++++.|.| .|.||+.+++.|. . -|.+|++.+|..........+++ ..+++++++.+|. ++|+
T Consensus 143 L~gktvGIiG-~G~IG~~va~~l~~~-----fgm~V~~~~~~~~~~~~~~~~~~--------~~~l~ell~~sDvv~lh~ 208 (323)
T PRK15409 143 VHHKTLGIVG-MGRIGMALAQRAHFG-----FNMPILYNARRHHKEAEERFNAR--------YCDLDTLLQESDFVCIIL 208 (323)
T ss_pred CCCCEEEEEc-ccHHHHHHHHHHHhc-----CCCEEEEECCCCchhhHHhcCcE--------ecCHHHHHHhCCEEEEeC
Confidence 4578999999 8999999999997 6 68899988876432110001111 1246778899996 4454
No 469
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=88.03 E-value=0.68 Score=46.68 Aligned_cols=65 Identities=18% Similarity=0.166 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI 100 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~ 100 (396)
..+|+|.|.| .|.||+.+++.|.. .|++|++.+|..........++.. .++++++++.+|. ++|+
T Consensus 136 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~-------~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 136 LYGKTLGVIG-LGRIGSIVAKRAKA-----FGMKVLAYDPYISPERAEQLGVEL-------VDDLDELLARADFITVHT 201 (525)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEE-------cCCHHHHHhhCCEEEEcc
Confidence 4568999999 89999999999988 799999998753221000011111 1246777888886 4444
No 470
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=87.94 E-value=1.8 Score=41.44 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=30.1
Q ss_pred CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
...+..+|+|.| .|-+|+.++..|.. .|. ++++++.+
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~-----~Gvg~i~ivD~D 74 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLAS-----AGVGTITLIDDD 74 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEeCC
Confidence 344567999999 78889999999998 565 68888876
No 471
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=87.88 E-value=0.71 Score=40.17 Aligned_cols=35 Identities=20% Similarity=0.081 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
.+++|||.| .|-+|...++.|++ .|++|+++++..
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~-----~ga~V~VIs~~~ 43 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLK-----YGAHIVVISPEL 43 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEcCCC
Confidence 358999999 59999999999999 789999998653
No 472
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=87.85 E-value=0.66 Score=45.13 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=30.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
.+|+|+| +|++|..++.+|.+ .|++|+++.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La~-----~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALAQ-----RGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeCCC
Confidence 4899999 89999999999999 799999999975
No 473
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=87.84 E-value=2.7 Score=37.36 Aligned_cols=34 Identities=26% Similarity=0.185 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
++.+|+|.| .|-+|+++++.|.. .|. ++++++.+
T Consensus 10 ~~~~VlVvG-~GGvGs~va~~Lar-----~GVg~i~LvD~D 44 (231)
T cd00755 10 RNAHVAVVG-LGGVGSWAAEALAR-----SGVGKLTLIDFD 44 (231)
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEECCC
Confidence 357899999 88899999999998 566 68888865
No 474
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=87.70 E-value=0.73 Score=43.06 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
..+.++||+||+|.+|..+++.+.. .|.+|+++++.+
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~-----~g~~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKA-----LGARVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-----cCCeEEEEeCCH
Confidence 3457899999999999999999988 789999998865
No 475
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=87.69 E-value=0.59 Score=43.28 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
|.++|.|.| .|.+|..++..|.+ .|++|++.+|++.
T Consensus 1 ~~~~IgviG-~G~mG~~~a~~l~~-----~g~~v~~~d~~~~ 36 (296)
T PRK11559 1 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVYDRNPE 36 (296)
T ss_pred CCceEEEEc-cCHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence 346899999 89999999999998 7999999998754
No 476
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=87.66 E-value=0.65 Score=43.08 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=29.6
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
++|+|.| +|-+|+.++..|.+ .|++|++++|++
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQ-----AGHDVTLVARRG 33 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCh
Confidence 4799999 59999999999998 799999999964
No 477
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.61 E-value=1 Score=41.23 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=42.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
..+|+|.|.|.+|.+|..++..|++ .|+.|++...+. . ++.+..+.+|.|+-+.+
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~-----~gatVtv~~s~t-------~-------------~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLD-----KNATVTLTHSRT-------R-------------NLAEVARKADILVVAIG 210 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHH-----CCCEEEEECCCC-------C-------------CHHHHHhhCCEEEEecC
Confidence 4578999999999999999999998 799998772110 0 25667788887777654
No 478
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=87.52 E-value=0.67 Score=38.75 Aligned_cols=62 Identities=19% Similarity=0.125 Sum_probs=40.4
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
++|.+.| .|-.|+.+++.|++ .||+|++.+|.+.... ....+ ...+| +..++++.+|.|+-+
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~-----~g~~v~~~d~~~~~~~~~~~~g--~~~~~-----s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAK-----AGYEVTVYDRSPEKAEALAEAG--AEVAD-----SPAEAAEQADVVILC 64 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHH-----TTTEEEEEESSHHHHHHHHHTT--EEEES-----SHHHHHHHBSEEEE-
T ss_pred CEEEEEc-hHHHHHHHHHHHHh-----cCCeEEeeccchhhhhhhHHhh--hhhhh-----hhhhHhhcccceEee
Confidence 6899999 79999999999998 8999999998754310 00012 11222 345667777765555
No 479
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=87.50 E-value=1 Score=43.82 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=29.9
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
.|+|.|.|+||-||+..++-+.+.+ ..++|+++.-.
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~p---d~f~vvaLaag 92 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENP---DKFKVVALAAG 92 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCc---cccEEEEEECC
Confidence 3799999999999999999887643 46889888754
No 480
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=87.44 E-value=0.4 Score=44.58 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=42.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI 100 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~ 100 (396)
|+|.|.| .|.+|+.+++.|.+ .||+|++.+|++.... ....+.. ...+.+++.+.+..+|.|+-+
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~-----~g~~V~~~dr~~~~~~~l~~~g~~----~~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAK-----RGHDCVGYDHDQDAVKAMKEDRTT----GVANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCc----ccCCHHHHHhhcCCCCEEEEE
Confidence 3799999 89999999999998 7999999999764310 0001111 113445555555666765555
No 481
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=87.30 E-value=0.59 Score=42.85 Aligned_cols=35 Identities=31% Similarity=0.317 Sum_probs=28.8
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
.++|+|.| .|.+|+.+++.|.+ .|+.|.++.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~-----~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKE-----AGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHH-----cCCeEEEEeecCc
Confidence 45777777 99999999999999 8998877776543
No 482
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=87.28 E-value=0.76 Score=43.34 Aligned_cols=37 Identities=30% Similarity=0.415 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR 62 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R 62 (396)
++.+|.|.||||++|..|++.|.+...+ ..++..+..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP--~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFP--VGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCC--ceEEEEEEc
Confidence 4568999999999999999999983221 235666654
No 483
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=87.26 E-value=2.1 Score=37.95 Aligned_cols=34 Identities=24% Similarity=0.227 Sum_probs=27.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
..+|+|.| -|-+|++.++.|.+ .|. ++++++-+.
T Consensus 30 ~~~V~VvG-iGGVGSw~veALaR-----sGig~itlID~D~ 64 (263)
T COG1179 30 QAHVCVVG-IGGVGSWAVEALAR-----SGIGRITLIDMDD 64 (263)
T ss_pred hCcEEEEe-cCchhHHHHHHHHH-----cCCCeEEEEeccc
Confidence 46899999 77789999999998 566 477777653
No 484
>PLN02775 Probable dihydrodipicolinate reductase
Probab=87.25 E-value=4.7 Score=36.92 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=31.5
Q ss_pred cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCC
Q 016047 20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRP 64 (396)
Q Consensus 20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~ 64 (396)
+++++..+|+|.|++|-.|+.+++.+.+ .+.++++ +++.+
T Consensus 6 ~~~~~~i~V~V~Ga~G~MG~~~~~av~~-----~~~~Lv~~~~~~~ 46 (286)
T PLN02775 6 SPPGSAIPIMVNGCTGKMGHAVAEAAVS-----AGLQLVPVSFTGP 46 (286)
T ss_pred CCcCCCCeEEEECCCChHHHHHHHHHhc-----CCCEEEEEecccc
Confidence 4456667999999999999999999998 6778555 44444
No 485
>PLN00203 glutamyl-tRNA reductase
Probab=87.24 E-value=0.29 Score=48.97 Aligned_cols=68 Identities=21% Similarity=0.097 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC--CCC-CCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~--~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
.+++|+|.|+ |-+|..+++.|.. .|. +|+++.|..... ... .+++.+ .+...+++.+++.++|.|+.
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~-----~G~~~V~V~nRs~era~~La~~~~g~~i---~~~~~~dl~~al~~aDVVIs 335 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVS-----KGCTKMVVVNRSEERVAALREEFPDVEI---IYKPLDEMLACAAEADVVFT 335 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHhCCCce---EeecHhhHHHHHhcCCEEEE
Confidence 3579999996 9999999999998 676 699999976432 100 012211 12223455677888887665
Q ss_pred E
Q 016047 100 I 100 (396)
Q Consensus 100 ~ 100 (396)
+
T Consensus 336 A 336 (519)
T PLN00203 336 S 336 (519)
T ss_pred c
Confidence 5
No 486
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=87.19 E-value=2.8 Score=36.76 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR 63 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~ 63 (396)
...+|+|.| .|-+|+.++..|.. .|. ++++++.+
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~-----~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALAR-----SGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHH-----cCCCeEEEEeCC
Confidence 457899999 68899999999998 676 48888876
No 487
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.17 E-value=1.4 Score=40.41 Aligned_cols=55 Identities=20% Similarity=0.155 Sum_probs=42.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY 102 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~ 102 (396)
..+++|+|.|.++.+|+.|+..|++ +|..|+.+..+. .++.+.++.+|.|+-.++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~-----~~atVt~~hs~t--------------------~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQ-----AGATVTICHSKT--------------------RDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEecCCC--------------------CCHHHHhhhCCEEEEcCC
Confidence 3568999999999999999999998 788898764321 125567788887666544
No 488
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=87.12 E-value=0.65 Score=45.81 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=30.7
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
+++|+|||++| +|...++.|.+ .|++|++.++..
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~-----~G~~V~~~d~~~ 38 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHK-----LGANVTVNDGKP 38 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHH-----CCCEEEEEcCCC
Confidence 57899999988 99999999998 899999998764
No 489
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=87.12 E-value=3.9 Score=37.21 Aligned_cols=35 Identities=23% Similarity=0.152 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP 64 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~ 64 (396)
...+|+|.| .|-+|+++++.|.. .|. ++++++.+.
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar-----~GVg~itLiD~D~ 64 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALAR-----TGIGAITLIDMDD 64 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCE
Confidence 457999999 88899999999998 674 688888763
No 490
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=87.07 E-value=0.62 Score=42.81 Aligned_cols=34 Identities=41% Similarity=0.487 Sum_probs=30.3
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
++|.|.| .|.+|..++..|.+ .|++|++.+|++.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~-----~g~~V~~~d~~~~ 34 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRS-----LGHTVYGVSRRES 34 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence 3799999 89999999999998 7999999998753
No 491
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=86.94 E-value=1 Score=39.32 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=40.5
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVS 82 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~ 82 (396)
+++|||.| .|-+|..-++.|++ .|.+|++++....+. +....+++++..+..
T Consensus 9 gk~vlVvG-gG~va~rk~~~Ll~-----~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~ 63 (205)
T TIGR01470 9 GRAVLVVG-GGDVALRKARLLLK-----AGAQLRVIAEELESELTLLAEQGGITWLARCFD 63 (205)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHH-----CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC
Confidence 57999999 89999999999999 789999998754322 112247888888876
No 492
>PRK06545 prephenate dehydrogenase; Validated
Probab=86.83 E-value=0.45 Score=45.52 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=29.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
++|.|.| +|.+|..++..|.+ .|++|.+.++++.
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~-----~G~~v~i~~~~~~ 34 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKA-----AGPDVFIIGYDPS 34 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHh-----cCCCeEEEEeCCC
Confidence 4789998 89999999999998 7888888887754
No 493
>PRK08605 D-lactate dehydrogenase; Validated
Probab=86.76 E-value=1 Score=42.59 Aligned_cols=63 Identities=17% Similarity=0.136 Sum_probs=42.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047 23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH 99 (396)
Q Consensus 23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h 99 (396)
..+++|.|.| .|.||+.+++.|.+. .|.+|++.+|.+..... .. +.-..++.++++.+|.|+-
T Consensus 144 l~g~~VgIIG-~G~IG~~vA~~L~~~----~g~~V~~~d~~~~~~~~--~~-------~~~~~~l~ell~~aDvIvl 206 (332)
T PRK08605 144 IKDLKVAVIG-TGRIGLAVAKIFAKG----YGSDVVAYDPFPNAKAA--TY-------VDYKDTIEEAVEGADIVTL 206 (332)
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHhc----CCCEEEEECCCccHhHH--hh-------ccccCCHHHHHHhCCEEEE
Confidence 3568999999 899999999999431 58899998876533210 11 1112246778888987443
No 494
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=86.69 E-value=0.97 Score=35.63 Aligned_cols=30 Identities=33% Similarity=0.491 Sum_probs=25.8
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV 60 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l 60 (396)
+|.|+|++|.+|..+++.|.+. .++++.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~----~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH----PDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC----CCceEEEE
Confidence 5889999999999999999984 46787777
No 495
>PRK08818 prephenate dehydrogenase; Provisional
Probab=86.58 E-value=0.88 Score=43.50 Aligned_cols=35 Identities=34% Similarity=0.336 Sum_probs=30.4
Q ss_pred CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
.++|+|.|.+|.+|..+++.|.+. .+++|++++|.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~----~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTR----MQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc----CCCEEEEEcCC
Confidence 469999999999999999999972 37899999874
No 496
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=86.24 E-value=0.73 Score=42.56 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=30.5
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK 65 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~ 65 (396)
++|.|.| .|.+|..++..|.+ .|++|+++++++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFAV-----SGFQTTLVDIKQE 35 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHHh-----CCCcEEEEeCCHH
Confidence 5799999 59999999999998 7999999998754
No 497
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=86.23 E-value=0.79 Score=38.10 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.5
Q ss_pred EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047 27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP 64 (396)
Q Consensus 27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~ 64 (396)
||.|.| +|..|.+++..|.+ +|++|+...|++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~-----~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLAD-----NGHEVTLWGRDE 32 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHH-----CTEEEEEETSCH
T ss_pred CEEEEC-cCHHHHHHHHHHHH-----cCCEEEEEeccH
Confidence 689999 89999999999999 899999999984
No 498
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=86.22 E-value=0.67 Score=43.16 Aligned_cols=22 Identities=36% Similarity=0.517 Sum_probs=21.0
Q ss_pred CEEEEEcCCChhHHHHHHHcCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPL 47 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~ 47 (396)
++|.|.||||.+|+.+++.|.+
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e 23 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEE 23 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHh
Confidence 6899999999999999999998
No 499
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=86.15 E-value=0.8 Score=41.69 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEEeCCCC
Q 016047 24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPK 65 (396)
Q Consensus 24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~ 65 (396)
|.++|.|.| +|.+|..++..|.+ .| ++|++++|++.
T Consensus 1 ~mm~I~iIG-~G~mG~~la~~l~~-----~g~~~~~v~v~~r~~~ 39 (267)
T PRK11880 1 MMKKIGFIG-GGNMASAIIGGLLA-----SGVPAKDIIVSDPSPE 39 (267)
T ss_pred CCCEEEEEe-chHHHHHHHHHHHh-----CCCCcceEEEEcCCHH
Confidence 457899999 79999999999987 56 67999998753
No 500
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=86.02 E-value=0.87 Score=43.31 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=29.1
Q ss_pred CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047 26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR 63 (396)
Q Consensus 26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~ 63 (396)
|+|.|.|+||.||+..++-+.+.+ ..++|.+++-.
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~---~~f~v~~Laa~ 36 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNP---DHFQVVALSAG 36 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCc---cccEEEEEEcC
Confidence 689999999999999998876543 46899999854
Done!