Query 016048
Match_columns 396
No_of_seqs 416 out of 1228
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 03:19:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016048.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016048hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.5E-37 5.5E-42 271.7 31.5 344 6-392 14-363 (394)
2 TIGR02332 HpaX 4-hydroxyphenyl 100.0 5.2E-38 1.1E-42 290.0 28.1 372 5-393 8-398 (412)
3 PRK03545 putative arabinose tr 100.0 1.4E-36 3E-41 279.4 32.8 339 10-393 14-358 (390)
4 TIGR00900 2A0121 H+ Antiporter 100.0 5.8E-37 1.3E-41 279.7 28.4 350 8-391 2-364 (365)
5 PRK14995 methyl viologen resis 100.0 4.8E-36 1E-40 283.3 31.2 371 6-391 7-414 (495)
6 TIGR00891 2A0112 putative sial 100.0 6.1E-36 1.3E-40 276.9 28.7 370 7-392 14-392 (405)
7 PRK11551 putative 3-hydroxyphe 100.0 6.7E-36 1.5E-40 276.6 28.9 349 9-392 19-372 (406)
8 TIGR00893 2A0114 d-galactonate 100.0 4.1E-36 8.9E-41 277.1 26.5 359 16-392 5-375 (399)
9 TIGR00903 2A0129 major facilit 100.0 6E-36 1.3E-40 270.8 26.0 329 17-388 3-340 (368)
10 PRK11663 regulatory protein Uh 100.0 1.9E-35 4E-40 275.2 29.3 364 9-392 27-401 (434)
11 PRK09705 cynX putative cyanate 100.0 8.5E-35 1.8E-39 267.2 32.5 326 22-393 26-358 (393)
12 PRK09556 uhpT sugar phosphate 100.0 2E-35 4.3E-40 277.6 28.7 361 10-389 34-411 (467)
13 COG2271 UhpC Sugar phosphate p 100.0 1.1E-35 2.3E-40 257.8 24.1 364 8-390 28-409 (448)
14 PF07690 MFS_1: Major Facilita 100.0 4.9E-36 1.1E-40 272.2 21.8 343 10-381 1-352 (352)
15 TIGR00711 efflux_EmrB drug res 100.0 6.1E-35 1.3E-39 276.6 29.0 369 7-390 4-410 (485)
16 PRK10213 nepI ribonucleoside t 100.0 2.5E-34 5.5E-39 263.9 32.1 332 17-392 32-368 (394)
17 TIGR00890 2A0111 Oxalate/Forma 100.0 8.7E-35 1.9E-39 266.5 28.4 334 21-392 19-359 (377)
18 PRK10642 proline/glycine betai 100.0 5.9E-34 1.3E-38 269.0 33.2 362 7-391 18-405 (490)
19 TIGR00881 2A0104 phosphoglycer 100.0 3.9E-35 8.5E-40 269.0 24.5 361 14-393 4-375 (379)
20 PRK10091 MFS transport protein 100.0 9.9E-34 2.1E-38 259.5 32.4 344 4-392 2-352 (382)
21 TIGR01299 synapt_SV2 synaptic 100.0 1.3E-34 2.9E-39 278.6 27.6 366 11-390 173-710 (742)
22 TIGR00710 efflux_Bcr_CflA drug 100.0 1.2E-33 2.7E-38 259.8 31.8 346 3-387 3-358 (385)
23 PRK10489 enterobactin exporter 100.0 2.5E-34 5.3E-39 266.9 27.1 353 3-393 15-377 (417)
24 PRK09952 shikimate transporter 100.0 1.9E-33 4.1E-38 261.7 32.9 356 7-391 24-407 (438)
25 PRK11646 multidrug resistance 100.0 2.3E-33 5E-38 258.1 32.2 345 8-392 13-361 (400)
26 PRK03633 putative MFS family t 100.0 1.1E-33 2.3E-38 259.3 29.4 345 1-392 1-349 (381)
27 PRK10406 alpha-ketoglutarate t 100.0 1.4E-33 3.1E-38 262.5 30.6 345 11-387 28-396 (432)
28 PRK12307 putative sialic acid 100.0 5.6E-34 1.2E-38 265.5 27.3 357 6-392 19-385 (426)
29 TIGR00899 2A0120 sugar efflux 100.0 4.5E-33 9.7E-38 255.1 32.9 341 11-392 3-351 (375)
30 PRK03699 putative transporter; 100.0 1.3E-33 2.7E-38 259.9 29.3 345 6-393 8-358 (394)
31 TIGR00895 2A0115 benzoate tran 100.0 6.4E-34 1.4E-38 262.7 26.6 363 11-387 23-397 (398)
32 PRK12382 putative transporter; 100.0 5.6E-33 1.2E-37 255.8 31.9 342 5-392 15-366 (392)
33 PRK05122 major facilitator sup 100.0 4.3E-33 9.2E-38 257.3 31.2 344 2-391 12-365 (399)
34 PRK15402 multidrug efflux syst 100.0 6.1E-33 1.3E-37 256.7 31.0 344 11-392 19-372 (406)
35 PRK10504 putative transporter; 100.0 3.1E-33 6.7E-38 263.7 29.3 372 6-392 11-417 (471)
36 PRK10054 putative transporter; 100.0 2.2E-33 4.7E-38 257.8 26.8 352 2-393 4-362 (395)
37 TIGR00887 2A0109 phosphate:H+ 100.0 3.6E-33 7.8E-38 264.6 29.0 375 9-390 20-454 (502)
38 PRK10077 xylE D-xylose transpo 100.0 4.8E-33 1E-37 263.2 29.2 371 9-388 16-424 (479)
39 PRK11195 lysophospholipid tran 100.0 6.9E-33 1.5E-37 254.3 29.1 348 5-389 3-355 (393)
40 PRK11273 glpT sn-glycerol-3-ph 100.0 1.5E-32 3.3E-37 257.0 31.5 340 44-392 59-412 (452)
41 PRK15075 citrate-proton sympor 100.0 1.1E-32 2.4E-37 256.7 28.2 355 5-393 15-397 (434)
42 PRK09874 drug efflux system pr 100.0 2.3E-32 4.9E-37 253.3 29.7 354 5-392 14-375 (408)
43 PRK10133 L-fucose transporter; 100.0 2.3E-32 4.9E-37 253.7 28.6 346 8-392 29-409 (438)
44 TIGR00897 2A0118 polyol permea 100.0 9E-32 1.9E-36 248.2 32.4 351 4-392 12-378 (402)
45 TIGR00879 SP MFS transporter, 100.0 3.8E-32 8.2E-37 257.1 29.2 374 14-391 37-446 (481)
46 TIGR00885 fucP L-fucose:H+ sym 100.0 6E-32 1.3E-36 248.7 29.5 348 6-391 4-382 (410)
47 TIGR00898 2A0119 cation transp 100.0 5.6E-32 1.2E-36 257.4 29.4 332 40-385 116-467 (505)
48 TIGR00902 2A0127 phenyl propri 100.0 1E-31 2.3E-36 246.1 29.9 346 5-392 4-357 (382)
49 COG2223 NarK Nitrate/nitrite t 100.0 2.6E-32 5.5E-37 237.3 24.0 350 5-393 14-378 (417)
50 TIGR00896 CynX cyanate transpo 100.0 1.6E-31 3.4E-36 242.8 30.0 333 17-394 12-352 (355)
51 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-31 2.4E-36 250.3 29.6 340 44-392 57-410 (438)
52 TIGR00894 2A0114euk Na(+)-depe 100.0 6.9E-32 1.5E-36 253.9 28.0 334 42-390 70-422 (465)
53 TIGR00886 2A0108 nitrite extru 100.0 4.8E-32 1E-36 247.5 26.1 343 6-376 2-365 (366)
54 PRK10473 multidrug efflux syst 100.0 3.9E-31 8.4E-36 243.6 32.0 344 5-392 3-351 (392)
55 PRK15011 sugar efflux transpor 100.0 5.7E-31 1.2E-35 242.1 32.9 343 6-391 16-367 (393)
56 PRK15403 multidrug efflux syst 100.0 3.6E-31 7.8E-36 244.4 31.0 342 11-390 22-373 (413)
57 PRK11652 emrD multidrug resist 100.0 6E-31 1.3E-35 242.5 32.3 349 1-390 1-360 (394)
58 PLN00028 nitrate transmembrane 100.0 9.3E-32 2E-36 252.6 27.0 344 9-385 40-404 (476)
59 TIGR00883 2A0106 metabolite-pr 100.0 3.5E-31 7.7E-36 244.1 30.1 350 16-392 4-377 (394)
60 cd06174 MFS The Major Facilita 100.0 5.9E-31 1.3E-35 238.7 30.5 321 8-391 2-328 (352)
61 PRK15034 nitrate/nitrite trans 100.0 6.5E-31 1.4E-35 239.5 29.9 343 5-393 34-431 (462)
62 PRK11102 bicyclomycin/multidru 100.0 8.4E-31 1.8E-35 240.3 30.3 330 19-385 5-344 (377)
63 PRK11043 putative transporter; 100.0 1.1E-30 2.3E-35 241.4 30.8 338 9-390 10-357 (401)
64 TIGR00892 2A0113 monocarboxyla 100.0 3.5E-31 7.7E-36 247.4 27.6 342 40-392 46-397 (455)
65 PRK03893 putative sialic acid 100.0 1.6E-31 3.4E-36 253.9 25.3 373 6-392 21-430 (496)
66 KOG0569 Permease of the major 100.0 3.8E-30 8.2E-35 233.3 30.3 338 48-393 60-433 (485)
67 PF05977 MFS_3: Transmembrane 100.0 1.9E-30 4E-35 242.3 29.1 357 3-392 8-371 (524)
68 KOG1330 Sugar transporter/spin 100.0 5.6E-33 1.2E-37 243.1 10.0 360 5-393 33-415 (493)
69 KOG2615 Permease of the major 100.0 9.1E-31 2E-35 223.1 22.9 358 22-394 42-418 (451)
70 PRK11128 putative 3-phenylprop 100.0 5.2E-30 1.1E-34 235.0 29.6 340 9-392 8-357 (382)
71 KOG2532 Permease of the major 100.0 1.3E-30 2.8E-35 239.2 25.3 338 40-389 65-418 (466)
72 PRK09528 lacY galactoside perm 100.0 3.6E-30 7.7E-35 239.1 25.9 361 2-392 7-380 (420)
73 TIGR00901 2A0125 AmpG-related 100.0 6.3E-30 1.4E-34 232.5 26.7 318 21-374 4-355 (356)
74 PRK06814 acylglycerophosphoeth 100.0 1.2E-29 2.7E-34 263.1 29.9 360 3-390 9-396 (1140)
75 TIGR00882 2A0105 oligosacchari 100.0 2.8E-29 6E-34 231.5 28.8 358 5-392 2-372 (396)
76 PRK11010 ampG muropeptide tran 100.0 6.8E-29 1.5E-33 233.6 31.5 353 4-392 11-380 (491)
77 PRK08633 2-acyl-glycerophospho 100.0 1.9E-29 4.1E-34 262.5 30.3 359 3-389 7-383 (1146)
78 TIGR00889 2A0110 nucleoside tr 100.0 1.4E-28 3E-33 227.3 28.7 343 8-392 5-373 (418)
79 PRK11902 ampG muropeptide tran 100.0 2.1E-27 4.5E-32 219.3 30.1 343 10-392 4-367 (402)
80 KOG3764 Vesicular amine transp 100.0 2.1E-29 4.5E-34 216.1 15.3 353 7-392 23-431 (464)
81 TIGR00924 yjdL_sub1_fam amino 100.0 4.9E-27 1.1E-31 220.0 31.6 373 3-390 8-443 (475)
82 TIGR00792 gph sugar (Glycoside 100.0 2.6E-27 5.6E-32 221.5 29.3 344 16-392 10-382 (437)
83 COG0738 FucP Fucose permease [ 100.0 6.5E-27 1.4E-31 202.3 27.4 349 7-393 15-387 (422)
84 TIGR00805 oat sodium-independe 100.0 4.1E-28 8.9E-33 233.3 20.0 366 13-390 41-581 (633)
85 KOG0254 Predicted transporter 100.0 2.2E-26 4.8E-31 218.3 28.6 335 48-390 89-457 (513)
86 TIGR02718 sider_RhtX_FptX side 100.0 1E-25 2.3E-30 207.2 30.8 348 7-392 3-368 (390)
87 COG2807 CynX Cyanate permease 100.0 3.5E-25 7.5E-30 188.7 29.4 342 8-394 11-363 (395)
88 KOG2533 Permease of the major 100.0 9.7E-27 2.1E-31 214.1 21.6 333 40-382 73-422 (495)
89 PRK10207 dipeptide/tripeptide 100.0 2.2E-25 4.8E-30 208.8 30.0 366 3-387 12-438 (489)
90 PF00083 Sugar_tr: Sugar (and 99.9 6.9E-32 1.5E-36 253.2 -15.8 373 11-392 6-413 (451)
91 PF03825 Nuc_H_symport: Nucleo 99.9 4.8E-25 1E-29 200.3 28.8 348 8-394 5-368 (400)
92 TIGR01301 GPH_sucrose GPH fami 99.9 8.6E-25 1.9E-29 200.9 28.9 368 5-394 4-448 (477)
93 KOG0252 Inorganic phosphate tr 99.9 1.3E-27 2.8E-32 208.8 8.2 377 10-390 46-468 (538)
94 KOG0255 Synaptic vesicle trans 99.9 6.2E-25 1.3E-29 209.6 27.2 333 42-389 112-467 (521)
95 KOG0253 Synaptic vesicle trans 99.9 4.1E-25 8.9E-30 187.6 22.4 336 40-384 105-490 (528)
96 KOG2504 Monocarboxylate transp 99.9 1.1E-24 2.3E-29 202.7 24.2 347 40-393 73-453 (509)
97 PRK09584 tppB putative tripept 99.9 2.4E-23 5.3E-28 196.2 30.2 361 4-384 20-438 (500)
98 PF11700 ATG22: Vacuole efflux 99.9 8.4E-23 1.8E-27 189.1 31.0 328 47-394 69-446 (477)
99 PF06609 TRI12: Fungal trichot 99.9 7.9E-23 1.7E-27 190.5 30.1 359 18-392 57-469 (599)
100 PRK10429 melibiose:sodium symp 99.9 4.6E-23 1E-27 193.9 28.9 351 12-393 13-396 (473)
101 PF01306 LacY_symp: LacY proto 99.9 1.6E-23 3.5E-28 186.7 24.1 358 3-392 5-377 (412)
102 PRK09669 putative symporter Ya 99.9 2.3E-22 4.9E-27 188.1 30.4 337 21-393 25-391 (444)
103 COG2270 Permeases of the major 99.9 7.1E-23 1.5E-27 178.6 24.6 354 21-395 31-408 (438)
104 TIGR00806 rfc RFC reduced fola 99.9 7.4E-23 1.6E-27 183.4 25.3 334 40-381 53-406 (511)
105 PF13347 MFS_2: MFS/sugar tran 99.9 3.7E-23 8E-28 192.4 24.5 325 42-393 31-387 (428)
106 PRK09848 glucuronide transport 99.9 7.7E-22 1.7E-26 184.8 28.3 345 12-392 15-390 (448)
107 TIGR01272 gluP glucose/galacto 99.9 1.2E-21 2.6E-26 173.3 25.1 260 104-392 10-292 (310)
108 KOG2816 Predicted transporter 99.9 5.6E-22 1.2E-26 181.5 22.9 367 7-392 20-394 (463)
109 PTZ00207 hypothetical protein; 99.9 1.6E-21 3.4E-26 183.1 25.5 342 40-391 54-515 (591)
110 PRK15462 dipeptide/tripeptide 99.9 6.7E-20 1.5E-24 169.4 29.5 363 4-385 8-435 (493)
111 TIGR00788 fbt folate/biopterin 99.9 2.4E-21 5.2E-26 181.2 19.9 361 9-392 30-415 (468)
112 KOG4686 Predicted sugar transp 99.9 1.3E-21 2.8E-26 160.7 13.2 331 40-393 71-417 (459)
113 PRK11462 putative transporter; 99.9 7.2E-19 1.6E-23 164.4 32.1 338 17-391 21-388 (460)
114 COG2211 MelB Na+/melibiose sym 99.9 4.4E-19 9.5E-24 160.0 28.2 351 13-394 20-400 (467)
115 PF03209 PUCC: PUCC protein; 99.9 1.9E-18 4E-23 151.7 30.9 326 41-391 8-364 (403)
116 KOG2325 Predicted transporter/ 99.8 3.7E-19 8E-24 160.8 19.9 364 3-393 32-453 (488)
117 PF03137 OATP: Organic Anion T 99.8 8.6E-21 1.9E-25 178.2 -0.2 372 9-390 7-514 (539)
118 COG3104 PTR2 Dipeptide/tripept 99.8 5.5E-16 1.2E-20 138.9 24.5 370 3-385 19-451 (498)
119 KOG3626 Organic anion transpor 99.7 4.7E-17 1E-21 153.1 17.0 345 40-390 124-649 (735)
120 KOG2563 Permease of the major 99.7 6.9E-15 1.5E-19 129.7 23.0 324 46-392 77-423 (480)
121 PF05631 DUF791: Protein of un 99.6 1.3E-13 2.8E-18 119.5 21.8 270 11-319 40-322 (354)
122 TIGR00880 2_A_01_02 Multidrug 99.6 1.8E-15 4E-20 117.9 9.3 132 55-190 5-140 (141)
123 TIGR00889 2A0110 nucleoside tr 99.6 2.4E-14 5.2E-19 132.6 15.7 188 7-195 210-409 (418)
124 PRK09874 drug efflux system pr 99.6 1.1E-13 2.4E-18 128.3 15.5 171 12-190 226-400 (408)
125 PRK10642 proline/glycine betai 99.6 1E-13 2.3E-18 131.3 15.5 166 17-194 262-435 (490)
126 PRK09528 lacY galactoside perm 99.5 5.3E-14 1.1E-18 130.9 12.3 158 27-192 245-407 (420)
127 TIGR01299 synapt_SV2 synaptic 99.5 1.1E-13 2.4E-18 134.5 13.8 140 49-193 596-738 (742)
128 PRK10054 putative transporter; 99.5 8.4E-13 1.8E-17 121.6 16.6 152 237-389 5-157 (395)
129 PF03092 BT1: BT1 family; Int 99.5 1.5E-12 3.2E-17 120.6 17.9 340 40-393 17-383 (433)
130 PF01770 Folate_carrier: Reduc 99.5 1.1E-10 2.4E-15 104.3 28.9 320 53-380 46-392 (412)
131 PRK15011 sugar efflux transpor 99.5 6.3E-13 1.4E-17 122.5 15.3 163 15-190 226-392 (393)
132 PRK05122 major facilitator sup 99.5 1E-12 2.2E-17 121.5 13.9 160 17-191 228-391 (399)
133 PRK03893 putative sialic acid 99.5 6.6E-13 1.4E-17 126.4 12.7 145 24-177 294-442 (496)
134 TIGR00892 2A0113 monocarboxyla 99.5 1.6E-13 3.5E-18 128.7 8.2 164 7-182 243-415 (455)
135 TIGR00924 yjdL_sub1_fam amino 99.4 1.8E-12 3.9E-17 121.9 15.1 154 237-391 8-168 (475)
136 PRK10489 enterobactin exporter 99.4 2E-12 4.4E-17 120.2 15.0 160 24-194 242-405 (417)
137 TIGR00890 2A0111 Oxalate/Forma 99.4 5.8E-13 1.2E-17 122.0 11.0 164 7-180 207-374 (377)
138 PRK15462 dipeptide/tripeptide 99.4 3.4E-12 7.5E-17 118.5 16.0 154 237-391 7-165 (493)
139 TIGR00899 2A0120 sugar efflux 99.4 2E-12 4.3E-17 118.5 14.3 172 6-190 200-375 (375)
140 cd06174 MFS The Major Facilita 99.4 1.1E-12 2.3E-17 118.9 12.2 167 7-184 177-348 (352)
141 PRK11551 putative 3-hydroxyphe 99.4 1.2E-12 2.6E-17 121.3 12.6 154 21-186 236-394 (406)
142 PRK09556 uhpT sugar phosphate 99.4 2.6E-12 5.5E-17 121.2 13.8 167 7-184 260-445 (467)
143 PRK03545 putative arabinose tr 99.4 7.4E-12 1.6E-16 115.3 15.2 170 8-190 208-382 (390)
144 PRK11646 multidrug resistance 99.4 9.1E-12 2E-16 114.9 15.7 148 242-390 13-161 (400)
145 TIGR00902 2A0127 phenyl propri 99.4 4.7E-12 1E-16 116.2 13.3 165 5-182 205-373 (382)
146 PF06963 FPN1: Ferroportin1 (F 99.4 1.7E-09 3.6E-14 98.6 29.4 362 4-380 1-408 (432)
147 PRK12382 putative transporter; 99.4 6.8E-12 1.5E-16 115.7 13.3 158 18-189 229-390 (392)
148 PRK09705 cynX putative cyanate 99.4 1.1E-11 2.4E-16 114.1 14.1 177 7-196 207-389 (393)
149 PRK11195 lysophospholipid tran 99.4 2E-11 4.3E-16 112.4 14.9 148 239-390 3-150 (393)
150 PRK10207 dipeptide/tripeptide 99.3 2.4E-11 5.3E-16 114.4 15.7 154 237-391 12-170 (489)
151 PF07690 MFS_1: Major Facilita 99.3 3E-11 6.5E-16 109.6 15.5 145 246-391 3-148 (352)
152 PRK11663 regulatory protein Uh 99.3 2E-11 4.4E-16 114.0 14.5 147 243-391 27-174 (434)
153 PF05977 MFS_3: Transmembrane 99.3 2.8E-11 6E-16 114.0 15.3 167 6-183 219-389 (524)
154 PRK03633 putative MFS family t 99.3 3.1E-11 6.8E-16 110.8 14.7 151 238-390 5-156 (381)
155 PRK03699 putative transporter; 99.3 1.4E-11 3.1E-16 113.6 12.4 170 8-190 208-381 (394)
156 PRK10504 putative transporter; 99.3 3.5E-11 7.5E-16 113.8 14.8 151 239-391 10-161 (471)
157 TIGR00879 SP MFS transporter, 99.3 7.7E-12 1.7E-16 118.4 10.2 149 44-193 315-475 (481)
158 PF11700 ATG22: Vacuole efflux 99.3 4.7E-11 1E-15 111.2 15.0 178 3-192 279-471 (477)
159 TIGR02332 HpaX 4-hydroxyphenyl 99.3 5.1E-11 1.1E-15 110.4 15.3 132 256-389 25-157 (412)
160 TIGR00900 2A0121 H+ Antiporter 99.3 3.3E-11 7.1E-16 109.9 13.9 146 244-391 4-155 (365)
161 KOG0637 Sucrose transporter an 99.3 1.9E-11 4.1E-16 108.3 11.5 370 5-394 32-474 (498)
162 PRK09584 tppB putative tripept 99.3 6.9E-11 1.5E-15 111.9 16.2 155 236-391 18-177 (500)
163 PF02487 CLN3: CLN3 protein; 99.3 2.4E-09 5.2E-14 95.9 24.3 323 50-387 61-394 (402)
164 TIGR00893 2A0114 d-galactonate 99.3 3.2E-11 6.9E-16 111.1 13.1 167 6-184 216-395 (399)
165 TIGR00710 efflux_Bcr_CflA drug 99.3 6.6E-11 1.4E-15 108.8 14.9 139 251-391 17-156 (385)
166 PRK09952 shikimate transporter 99.3 7.3E-11 1.6E-15 110.3 14.9 167 14-191 259-435 (438)
167 PRK15034 nitrate/nitrite trans 99.3 1.2E-10 2.6E-15 107.2 15.8 147 239-387 34-186 (462)
168 PRK10213 nepI ribonucleoside t 99.3 1.7E-10 3.7E-15 106.3 16.8 133 257-391 38-171 (394)
169 TIGR00886 2A0108 nitrite extru 99.3 1.1E-10 2.3E-15 106.7 15.4 148 241-390 3-152 (366)
170 TIGR00891 2A0112 putative sial 99.3 1.5E-10 3.3E-15 107.1 16.6 148 242-391 15-163 (405)
171 PRK10077 xylE D-xylose transpo 99.3 4.9E-11 1.1E-15 113.1 12.6 144 49-194 307-463 (479)
172 TIGR00895 2A0115 benzoate tran 99.3 1.3E-10 2.8E-15 107.2 15.0 134 256-391 34-168 (398)
173 TIGR00883 2A0106 metabolite-pr 99.3 3.1E-11 6.8E-16 111.2 10.8 160 7-177 221-390 (394)
174 PRK10091 MFS transport protein 99.3 1.6E-10 3.5E-15 106.2 15.1 151 239-391 3-154 (382)
175 PRK11273 glpT sn-glycerol-3-ph 99.2 1.1E-10 2.3E-15 109.7 13.7 170 7-185 255-432 (452)
176 COG2814 AraJ Arabinose efflux 99.2 5.4E-10 1.2E-14 99.5 17.2 174 3-188 209-386 (394)
177 PRK11128 putative 3-phenylprop 99.2 1.5E-10 3.2E-15 106.4 13.9 162 6-180 206-371 (382)
178 TIGR00897 2A0118 polyol permea 99.2 2.6E-10 5.6E-15 105.5 15.4 152 238-391 12-169 (402)
179 TIGR00711 efflux_EmrB drug res 99.2 2E-10 4.4E-15 109.0 14.5 146 244-391 7-153 (485)
180 PLN00028 nitrate transmembrane 99.2 4.8E-10 1E-14 105.8 16.8 122 265-388 61-183 (476)
181 PRK11010 ampG muropeptide tran 99.2 2.3E-09 4.9E-14 101.5 21.3 170 10-191 227-405 (491)
182 TIGR00882 2A0105 oligosacchari 99.2 2.4E-10 5.3E-15 105.5 14.5 168 10-185 220-392 (396)
183 PRK11043 putative transporter; 99.2 5E-10 1.1E-14 103.6 15.9 140 251-391 15-157 (401)
184 PRK12307 putative sialic acid 99.2 4.2E-10 9.2E-15 105.0 15.5 145 244-390 23-168 (426)
185 COG2270 Permeases of the major 99.2 1.6E-10 3.5E-15 101.9 11.4 177 3-191 250-431 (438)
186 PRK14995 methyl viologen resis 99.2 4.6E-10 1E-14 106.6 15.5 149 241-391 8-158 (495)
187 PRK15402 multidrug efflux syst 99.2 4.5E-10 9.8E-15 104.1 15.1 146 43-190 246-397 (406)
188 PRK10473 multidrug efflux syst 99.2 5.4E-10 1.2E-14 103.1 15.5 150 239-390 3-153 (392)
189 TIGR00769 AAA ADP/ATP carrier 99.2 4.2E-08 9.2E-13 90.6 27.1 290 4-318 6-345 (472)
190 TIGR00898 2A0119 cation transp 99.2 3E-10 6.6E-15 108.4 13.6 136 56-194 363-500 (505)
191 PRK11652 emrD multidrug resist 99.2 7.1E-10 1.5E-14 102.3 15.2 134 256-391 25-159 (394)
192 TIGR00792 gph sugar (Glycoside 99.2 4.7E-10 1E-14 105.0 14.1 149 5-164 222-377 (437)
193 PRK08633 2-acyl-glycerophospho 99.2 3.4E-10 7.3E-15 118.9 13.7 162 7-179 234-401 (1146)
194 TIGR00806 rfc RFC reduced fola 99.2 2E-09 4.3E-14 97.8 16.6 132 256-389 42-175 (511)
195 TIGR02718 sider_RhtX_FptX side 99.2 5.9E-10 1.3E-14 102.8 13.7 165 6-182 209-385 (390)
196 PRK10133 L-fucose transporter; 99.2 1.4E-09 3E-14 101.5 16.0 145 242-388 29-177 (438)
197 TIGR00712 glpT glycerol-3-phos 99.2 4.8E-10 1E-14 104.9 13.0 175 9-192 255-437 (438)
198 COG2271 UhpC Sugar phosphate p 99.1 2.7E-10 5.8E-15 100.5 10.0 142 248-391 38-182 (448)
199 TIGR00885 fucP L-fucose:H+ sym 99.1 1.6E-09 3.5E-14 100.2 15.6 147 242-390 6-156 (410)
200 KOG3762 Predicted transporter 99.1 8.6E-11 1.9E-15 106.2 6.7 155 237-393 369-525 (618)
201 PRK11102 bicyclomycin/multidru 99.1 9.2E-10 2E-14 101.0 13.1 132 258-391 10-142 (377)
202 PF03825 Nuc_H_symport: Nucleo 99.1 1.7E-09 3.8E-14 98.8 14.5 177 4-191 206-398 (400)
203 PRK10406 alpha-ketoglutarate t 99.1 1.3E-09 2.7E-14 101.9 13.9 163 18-190 256-425 (432)
204 PRK09848 glucuronide transport 99.1 8.9E-10 1.9E-14 103.5 12.1 152 4-164 227-385 (448)
205 PRK06814 acylglycerophosphoeth 99.1 1.1E-09 2.5E-14 114.6 13.7 164 5-179 225-413 (1140)
206 PRK15075 citrate-proton sympor 99.1 1.6E-09 3.4E-14 101.4 13.0 139 17-164 250-391 (434)
207 TIGR00881 2A0104 phosphoglycer 99.1 6E-10 1.3E-14 102.1 9.9 137 251-389 7-145 (379)
208 PF01306 LacY_symp: LacY proto 99.1 5.1E-09 1.1E-13 94.3 14.9 166 21-194 236-406 (412)
209 KOG3098 Uncharacterized conser 99.1 8.3E-08 1.8E-12 87.5 22.7 303 54-383 56-407 (461)
210 PRK15403 multidrug efflux syst 99.1 4.8E-09 1E-13 97.3 15.0 128 261-390 38-166 (413)
211 COG3104 PTR2 Dipeptide/tripept 99.0 1.9E-09 4E-14 97.5 11.1 156 236-392 18-183 (498)
212 TIGR00903 2A0129 major facilit 99.0 4.8E-09 1E-13 95.5 13.4 131 258-391 10-141 (368)
213 COG2223 NarK Nitrate/nitrite t 99.0 3.5E-09 7.6E-14 93.6 11.5 135 255-391 29-166 (417)
214 TIGR00901 2A0125 AmpG-related 99.0 1.1E-09 2.3E-14 99.8 8.7 136 7-151 211-355 (356)
215 PRK10429 melibiose:sodium symp 99.0 2.4E-09 5.3E-14 101.1 11.3 150 5-164 231-390 (473)
216 PRK11902 ampG muropeptide tran 99.0 6.9E-09 1.5E-13 96.1 14.0 136 42-184 239-386 (402)
217 TIGR00880 2_A_01_02 Multidrug 99.0 2.3E-09 5.1E-14 83.1 8.3 108 283-391 6-114 (141)
218 KOG2615 Permease of the major 99.0 3.5E-09 7.6E-14 92.0 9.8 118 271-389 64-181 (451)
219 TIGR01272 gluP glucose/galacto 98.9 1.2E-08 2.7E-13 90.5 12.2 152 11-174 146-301 (310)
220 KOG2504 Monocarboxylate transp 98.9 4E-09 8.7E-14 99.0 9.4 172 5-189 298-476 (509)
221 TIGR00896 CynX cyanate transpo 98.9 6.5E-09 1.4E-13 94.5 10.5 144 8-164 200-345 (355)
222 KOG0569 Permease of the major 98.9 3.1E-08 6.7E-13 91.2 14.8 153 43-196 300-462 (485)
223 PF13347 MFS_2: MFS/sugar tran 98.9 2E-08 4.4E-13 93.7 13.9 150 3-164 223-381 (428)
224 PTZ00207 hypothetical protein; 98.9 5.4E-08 1.2E-12 92.4 16.6 129 256-388 44-179 (591)
225 KOG4686 Predicted sugar transp 98.9 2.2E-08 4.7E-13 83.6 11.9 147 5-164 264-411 (459)
226 TIGR00887 2A0109 phosphate:H+ 98.9 4.8E-08 1E-12 93.1 16.0 117 272-389 53-176 (502)
227 TIGR00926 2A1704 Peptide:H+ sy 98.9 6E-07 1.3E-11 86.9 23.5 140 44-184 19-178 (654)
228 KOG4332 Predicted sugar transp 98.9 3.3E-08 7.1E-13 81.8 12.6 317 12-370 44-386 (454)
229 TIGR00805 oat sodium-independe 98.9 5E-09 1.1E-13 101.8 9.2 135 256-391 49-235 (633)
230 KOG1330 Sugar transporter/spin 98.9 5.3E-09 1.1E-13 93.4 8.5 150 240-391 34-184 (493)
231 PRK09669 putative symporter Ya 98.9 2.2E-08 4.8E-13 93.9 13.2 151 4-164 228-385 (444)
232 TIGR01301 GPH_sucrose GPH fami 98.9 4E-08 8.8E-13 91.3 14.2 145 241-387 6-175 (477)
233 TIGR00894 2A0114euk Na(+)-depe 98.9 1.7E-08 3.6E-13 95.4 11.6 121 269-390 70-193 (465)
234 COG0477 ProP Permeases of the 98.9 6.3E-08 1.4E-12 85.8 14.8 162 10-179 7-176 (338)
235 TIGR00788 fbt folate/biopterin 98.8 1.3E-08 2.7E-13 95.8 9.7 121 40-164 280-410 (468)
236 COG0738 FucP Fucose permease [ 98.8 1.4E-07 3E-12 83.2 13.8 146 244-390 17-166 (422)
237 PF06813 Nodulin-like: Nodulin 98.8 1.7E-06 3.7E-11 73.1 18.6 150 40-192 29-185 (250)
238 KOG3574 Acetyl-CoA transporter 98.8 1.9E-06 4.2E-11 75.1 18.9 352 3-392 29-433 (510)
239 KOG3764 Vesicular amine transp 98.7 3.7E-08 8.1E-13 86.3 8.5 123 271-394 102-226 (464)
240 COG2211 MelB Na+/melibiose sym 98.7 1.3E-07 2.9E-12 86.3 10.9 152 3-163 234-392 (467)
241 PRK11462 putative transporter; 98.7 4.2E-07 9.2E-12 85.4 13.6 150 5-164 228-384 (460)
242 KOG3762 Predicted transporter 98.7 4.7E-08 1E-12 88.8 6.5 166 7-184 373-543 (618)
243 PF13000 Acatn: Acetyl-coenzym 98.6 1.8E-05 4E-10 72.0 22.0 369 7-392 2-469 (544)
244 KOG0253 Synaptic vesicle trans 98.6 3.4E-08 7.4E-13 85.6 4.6 126 58-189 391-519 (528)
245 PF03209 PUCC: PUCC protein; 98.6 2.4E-06 5.1E-11 76.1 15.2 171 5-183 208-393 (403)
246 KOG0254 Predicted transporter 98.6 1.2E-06 2.6E-11 83.7 14.5 110 277-388 91-201 (513)
247 COG2807 CynX Cyanate permease 98.6 1.2E-06 2.6E-11 76.3 12.1 167 7-186 210-383 (395)
248 PF12832 MFS_1_like: MFS_1 lik 98.5 1.7E-07 3.7E-12 63.6 4.6 73 8-88 3-75 (77)
249 KOG3810 Micronutrient transpor 98.5 3.9E-06 8.5E-11 72.4 13.2 311 61-379 55-377 (433)
250 KOG2532 Permease of the major 98.5 7E-07 1.5E-11 83.0 9.3 171 4-184 257-443 (466)
251 KOG0255 Synaptic vesicle trans 98.5 1.1E-06 2.3E-11 84.4 10.4 120 268-389 111-231 (521)
252 PF06609 TRI12: Fungal trichot 98.4 8.4E-06 1.8E-10 77.4 15.1 124 260-387 65-189 (599)
253 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00019 4.2E-09 67.1 22.7 282 5-312 24-355 (491)
254 PF06779 DUF1228: Protein of u 98.4 4.1E-07 9E-12 62.1 3.8 75 18-100 5-79 (85)
255 KOG0252 Inorganic phosphate tr 98.3 8.2E-07 1.8E-11 79.5 5.6 185 10-196 309-505 (538)
256 TIGR00939 2a57 Equilibrative N 98.2 0.00026 5.5E-09 65.7 20.3 104 278-383 310-427 (437)
257 PF05978 UNC-93: Ion channel r 98.2 1.3E-05 2.9E-10 62.4 9.4 104 55-163 44-147 (156)
258 KOG3880 Predicted small molecu 98.2 1.1E-05 2.4E-10 68.4 8.9 361 8-390 15-404 (409)
259 PF12832 MFS_1_like: MFS_1 lik 98.1 1.9E-05 4.1E-10 53.5 7.7 70 244-315 5-74 (77)
260 COG3202 ATP/ADP translocase [E 98.1 0.0066 1.4E-07 55.7 25.6 256 49-319 62-365 (509)
261 KOG2533 Permease of the major 98.1 0.00012 2.6E-09 68.7 14.2 121 268-389 74-195 (495)
262 PF05978 UNC-93: Ion channel r 98.0 0.00053 1.1E-08 53.6 15.2 111 279-390 41-151 (156)
263 KOG2325 Predicted transporter/ 98.0 0.0001 2.2E-09 67.9 11.7 148 239-387 34-188 (488)
264 PF06813 Nodulin-like: Nodulin 97.9 0.0002 4.3E-09 60.7 12.3 125 263-390 25-157 (250)
265 PF00854 PTR2: POT family; In 97.9 0.00029 6.3E-09 64.5 14.4 105 79-184 2-119 (372)
266 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00013 2.8E-09 71.0 11.9 136 254-390 2-150 (654)
267 PF00083 Sugar_tr: Sugar (and 97.9 3.5E-07 7.6E-12 86.1 -5.6 109 276-385 47-159 (451)
268 KOG1479 Nucleoside transporter 97.9 0.0016 3.5E-08 58.5 17.4 125 255-382 259-397 (406)
269 PF05631 DUF791: Protein of un 97.7 0.0017 3.7E-08 57.3 15.0 122 268-391 62-190 (354)
270 KOG2816 Predicted transporter 97.7 0.00041 9E-09 64.6 11.7 118 42-164 271-389 (463)
271 KOG1237 H+/oligopeptide sympor 97.7 0.0093 2E-07 57.3 19.9 135 48-183 73-240 (571)
272 KOG2563 Permease of the major 97.6 0.00061 1.3E-08 61.5 9.9 128 262-391 67-203 (480)
273 COG0477 ProP Permeases of the 97.4 0.0061 1.3E-07 53.5 14.9 130 259-390 22-158 (338)
274 PF06779 DUF1228: Protein of u 97.2 0.0035 7.7E-08 43.0 7.8 74 256-331 9-82 (85)
275 PF07672 MFS_Mycoplasma: Mycop 97.2 0.043 9.3E-07 46.3 15.5 51 137-187 2-61 (267)
276 PF03092 BT1: BT1 family; Int 97.2 0.0062 1.3E-07 56.9 12.0 132 260-393 10-153 (433)
277 KOG3098 Uncharacterized conser 97.0 0.013 2.7E-07 54.3 12.4 151 6-162 241-409 (461)
278 PF01770 Folate_carrier: Reduc 97.0 0.024 5.3E-07 51.6 13.8 136 255-390 19-155 (412)
279 KOG0637 Sucrose transporter an 97.0 0.00094 2E-08 60.4 4.8 144 240-385 33-200 (498)
280 PF03137 OATP: Organic Anion T 96.4 0.00054 1.2E-08 65.4 -1.2 137 255-392 18-205 (539)
281 PF01733 Nucleoside_tran: Nucl 96.4 0.001 2.2E-08 59.1 0.4 104 279-384 186-304 (309)
282 PF02487 CLN3: CLN3 protein; 96.3 0.051 1.1E-06 49.5 10.7 110 47-164 280-394 (402)
283 PRK03612 spermidine synthase; 96.3 0.12 2.6E-06 49.4 13.6 119 43-164 45-168 (521)
284 TIGR00769 AAA ADP/ATP carrier 96.2 0.22 4.9E-06 46.7 14.6 124 266-389 29-190 (472)
285 PF06963 FPN1: Ferroportin1 (F 95.7 0.13 2.7E-06 47.7 10.8 130 44-174 289-425 (432)
286 PRK03612 spermidine synthase; 95.5 0.77 1.7E-05 44.0 15.6 141 246-389 21-170 (521)
287 KOG3626 Organic anion transpor 95.2 0.044 9.5E-07 53.5 6.2 137 257-394 114-303 (735)
288 PF07857 DUF1632: CEO family ( 94.3 2.4 5.2E-05 36.1 13.6 25 245-269 184-208 (254)
289 KOG2601 Iron transporter [Inor 93.7 1.1 2.3E-05 40.3 10.5 76 5-87 27-102 (503)
290 TIGR00939 2a57 Equilibrative N 93.5 1 2.2E-05 42.2 11.1 148 7-162 271-429 (437)
291 KOG4332 Predicted sugar transp 92.7 0.61 1.3E-05 39.8 7.4 133 50-183 284-426 (454)
292 KOG3574 Acetyl-CoA transporter 92.5 2.1 4.6E-05 38.6 10.7 141 238-383 30-188 (510)
293 KOG3097 Predicted membrane pro 92.3 7.1 0.00015 34.6 13.4 71 60-135 70-140 (390)
294 KOG4830 Predicted sugar transp 92.2 0.011 2.4E-07 49.5 -3.3 56 237-292 199-254 (412)
295 PF00854 PTR2: POT family; In 89.7 1.9 4.1E-05 39.5 8.4 85 307-391 2-99 (372)
296 KOG1479 Nucleoside transporter 88.2 5.4 0.00012 36.5 9.8 131 22-162 260-400 (406)
297 KOG1237 H+/oligopeptide sympor 87.8 13 0.00028 36.2 12.8 145 244-389 42-219 (571)
298 KOG2881 Predicted membrane pro 84.4 24 0.00053 29.9 11.5 23 296-318 260-282 (294)
299 KOG3880 Predicted small molecu 84.2 5.2 0.00011 35.1 7.2 74 87-164 328-401 (409)
300 PF01733 Nucleoside_tran: Nucl 82.7 0.49 1.1E-05 42.1 0.6 150 6-162 144-305 (309)
301 PF02990 EMP70: Endomembrane p 79.2 63 0.0014 31.2 13.5 24 281-305 303-326 (521)
302 KOG3097 Predicted membrane pro 74.5 34 0.00075 30.5 9.2 34 285-319 68-101 (390)
303 PF07672 MFS_Mycoplasma: Mycop 73.6 31 0.00068 29.6 8.5 105 50-156 143-254 (267)
304 COG5336 Uncharacterized protei 64.2 17 0.00037 26.0 4.3 36 48-83 42-78 (116)
305 PF03219 TLC: TLC ATP/ADP tran 61.6 1.5E+02 0.0033 28.3 16.4 42 348-389 164-205 (491)
306 KOG3810 Micronutrient transpor 61.5 17 0.00037 32.7 4.8 97 48-148 271-369 (433)
307 PF11947 DUF3464: Protein of u 55.8 60 0.0013 25.3 6.4 37 343-379 109-145 (153)
308 PRK11469 hypothetical protein; 53.1 1.2E+02 0.0027 24.6 15.3 42 282-323 141-182 (188)
309 TIGR01667 YCCS_YHJK integral m 51.9 1.2E+02 0.0025 30.7 9.4 48 67-116 42-93 (701)
310 PRK13629 threonine/serine tran 48.7 2.4E+02 0.0052 26.6 17.2 33 135-167 18-50 (443)
311 KOG2601 Iron transporter [Inor 47.4 2.3E+02 0.0051 26.2 11.3 148 244-392 32-203 (503)
312 COG5336 Uncharacterized protei 47.0 1.1E+02 0.0023 22.2 6.4 19 296-314 62-81 (116)
313 TIGR00814 stp serine transport 45.9 2.5E+02 0.0054 26.1 18.1 34 135-168 2-35 (397)
314 PF11872 DUF3392: Protein of u 45.0 1.2E+02 0.0025 22.0 7.1 36 235-270 45-80 (106)
315 PF12805 FUSC-like: FUSC-like 44.7 1.4E+02 0.003 26.1 8.0 25 170-194 78-102 (284)
316 PF02694 UPF0060: Uncharacteri 42.3 23 0.00049 25.5 2.1 50 50-99 56-105 (107)
317 TIGR01666 YCCS hypothetical me 42.1 1.4E+02 0.003 30.2 8.2 47 68-116 43-93 (704)
318 COG3202 ATP/ADP translocase [E 41.5 3.3E+02 0.0071 26.1 14.7 124 266-390 49-210 (509)
319 COG2962 RarD Predicted permeas 40.5 2.5E+02 0.0055 24.6 10.8 45 283-330 107-151 (293)
320 TIGR02840 spore_YtaF putative 40.4 2.1E+02 0.0046 23.6 14.5 25 142-166 35-60 (206)
321 PRK02237 hypothetical protein; 38.1 45 0.00098 24.0 3.1 50 50-99 58-107 (109)
322 PF06912 DUF1275: Protein of u 37.6 2.3E+02 0.005 23.3 11.6 32 59-90 57-91 (209)
323 COG4262 Predicted spermidine s 37.5 3E+02 0.0064 25.2 8.5 173 1-189 6-192 (508)
324 COG3559 TnrB3 Putative exporte 37.1 3.6E+02 0.0077 25.3 16.7 25 119-143 175-199 (536)
325 PF02694 UPF0060: Uncharacteri 35.1 85 0.0018 22.6 4.1 49 275-324 54-102 (107)
326 COG1268 BioY Uncharacterized c 32.3 65 0.0014 26.0 3.6 20 58-77 92-111 (184)
327 PRK02237 hypothetical protein; 28.8 1.6E+02 0.0036 21.3 4.6 47 276-323 57-103 (109)
328 PF10183 ESSS: ESSS subunit of 28.4 1E+02 0.0023 22.2 3.8 30 164-193 57-86 (105)
329 KOG4830 Predicted sugar transp 28.2 1.1E+02 0.0025 26.4 4.4 52 254-307 32-92 (412)
330 PF13000 Acatn: Acetyl-coenzym 27.9 5.7E+02 0.012 24.8 11.3 51 104-155 405-455 (544)
331 PF03773 DUF318: Predicted per 27.5 4.4E+02 0.0095 23.4 12.5 50 118-170 65-114 (307)
332 TIGR00801 ncs2 uracil-xanthine 26.7 5.3E+02 0.012 24.1 10.9 46 255-302 18-63 (415)
333 KOG1278 Endosomal membrane pro 24.0 2E+02 0.0044 27.7 5.6 31 272-303 356-386 (628)
334 PF04341 DUF485: Protein of un 23.7 2.6E+02 0.0056 19.5 6.0 43 240-282 17-59 (91)
335 TIGR02230 ATPase_gene1 F0F1-AT 22.8 2.9E+02 0.0064 19.8 5.0 30 62-91 56-86 (100)
336 PF07168 Ureide_permease: Urei 22.3 5.6E+02 0.012 22.8 7.6 10 70-79 16-25 (336)
337 TIGR03173 pbuX xanthine permea 22.0 6.4E+02 0.014 23.4 9.0 33 260-292 13-45 (406)
338 PF13536 EmrE: Multidrug resis 21.9 3.1E+02 0.0068 19.7 8.8 22 299-320 82-103 (113)
339 cd02434 Nodulin-21_like_3 Nodu 21.7 4.9E+02 0.011 21.9 13.0 17 294-310 185-201 (225)
340 COG1457 CodB Purine-cytosine p 21.0 7.2E+02 0.016 23.6 20.5 33 276-309 129-161 (442)
341 PF11947 DUF3464: Protein of u 21.0 2.9E+02 0.0064 21.6 5.1 49 104-156 97-145 (153)
342 PF12273 RCR: Chitin synthesis 20.3 46 0.00099 25.1 0.7 16 167-182 1-16 (130)
343 PF02632 BioY: BioY family; I 20.2 1.6E+02 0.0035 22.9 3.7 23 57-79 62-84 (148)
344 PF01988 VIT1: VIT family; In 20.1 5.1E+02 0.011 21.5 13.9 15 295-309 176-190 (213)
345 KOG1277 Endosomal membrane pro 20.1 4.6E+02 0.01 24.8 6.9 11 296-306 347-357 (593)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=271.66 Aligned_cols=344 Identities=18% Similarity=0.197 Sum_probs=293.2
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.++.+.++.|.......+..+.+|++ .+|++.|..+.|+..++|.++..+++|+...+.||+.||++++...
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~i--------A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l 85 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPI--------AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLL 85 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHH--------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH
Confidence 45567888889999999999999999 5567888899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH--
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF-- 163 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-- 163 (396)
.++.++.+++++++| |+.++++|++.|+ +.|.+++...++..|..|+++|++++++...+.+++.++|.+++.+
T Consensus 86 ~lFi~~n~l~alAp~---f~~Ll~aR~~~g~-a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 86 ALFIVSNLLSALAPS---FAVLLLARALAGL-AHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999 9999999999999 9999999999999999999999999999999999999888776665
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhH
Q 016048 164 --ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTF 241 (396)
Q Consensus 164 --~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (396)
+|||..|+..++++++..+..+..+| |++.+ ++++.+.++.++.+ ++|.+
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~-------------------------~~~~~~~~~~~~~l-~~p~v 213 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS-------------------------GSLPGPLRTLLRLL-RRPGV 213 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC-------------------------CCCCcchhHHHHHh-cCchH
Confidence 48999999999999999999989999 22211 11112344445445 57888
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
+...+..++....++..++|+.+++++..|++.+..++.+..++++.++++ .++|++.|| +.|+.+.....+..+.++
T Consensus 214 ~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l~a~~~l 291 (394)
T COG2814 214 LLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLLLALALL 291 (394)
T ss_pred HHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHHHHHHHH
Confidence 888888888888999999999999999999999999999999999999999 888999999 888888888888888877
Q ss_pred HHHHhhhhhHHH-H-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 322 LYSVAWSSWVPY-A-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 322 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.+.+..+..... . ..+.++..............+ .-||.++.+.+++....++|..+|..++|.++|+++
T Consensus 292 ~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g 363 (394)
T COG2814 292 ALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG 363 (394)
T ss_pred HHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 777665544322 2 233444455555555556666 335899999999999999999999999999999854
No 2
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=5.2e-38 Score=289.99 Aligned_cols=372 Identities=13% Similarity=0.081 Sum_probs=273.0
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.+..+++..++++++........|.+ ++|++.+..+.|++.+++.+++.+++++.|+++||+|||+++..+
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l--------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~ 79 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTM--------GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGI 79 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhh--------HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHH
Confidence 344455666777788888887777766 557788899999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.++.+++.++++++++ ++.+++.|+++|+ +.+...+....++.|++|+++|++++++++...++|..+++.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 80 MVLWGIASTATMFATG---PESLYLLRILVGI-AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999 88988899999999999999999999999999999999999888653
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhh-hh---hh-h-hhhhhhhhccCCCh
Q 016048 165 ----------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEIS-AS---CE-E-STKKLQVFKRLPSI 228 (396)
Q Consensus 165 ----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~-~~---~~-~-~~~~~~~~~~~~~~ 228 (396)
+||+.|++.++..++..++.++++||+|++.+. +.+.+++.. +. ++ + ++.+++.++++...
T Consensus 156 ~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (412)
T TIGR02332 156 LALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKW---LDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQ 232 (412)
T ss_pred HhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCC---CCHHHHHHHHHHHHhccccccccccccccccccH
Confidence 899999999888887777777888998764220 000000000 00 00 0 00000000111112
Q ss_pred hHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh-ccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh
Q 016048 229 DDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK-FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR 307 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 307 (396)
++.++.++ ++.++...+..++....++.+.+++|.|+++. .++++.+.+.......+...++. ++.++++||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22233333 46677777777777778888899999999873 46788888889999999999999 77789999998776
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 308 L-LSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 308 ~-~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
. .........+++.+.....+...... ....+.+.....+.......|.+|+++|+++.|+.+...++|++++|.+.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 4 33344444444322222222221111 112222222233444455567899999999999999999999999999999
Q ss_pred hhhhcccC
Q 016048 386 PLTGDCRF 393 (396)
Q Consensus 386 ~l~~~~~~ 393 (396)
.+.|..++
T Consensus 391 ~i~~~~g~ 398 (412)
T TIGR02332 391 ILKDATGS 398 (412)
T ss_pred cccccCCC
Confidence 99997653
No 3
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.4e-36 Score=279.44 Aligned_cols=339 Identities=17% Similarity=0.192 Sum_probs=262.4
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
+.+..++.........+.+|.+ .++++.+..+.|+..+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~l--------~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 14 LALAAFIFNTTEFVPVGLLSDI--------AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred HHHHHHHHHhHHHHHHcchHHH--------HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3444444444444555667777 45678888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----h
Q 016048 90 IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----S 165 (396)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~ 165 (396)
++.++++++++ ++.++++|+++|+ +.+...+...+++.|++|+|+|++++++...+.++|..+||.+++.+ +
T Consensus 86 ~~~~~~~~~~~---~~~l~~~r~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g 161 (390)
T PRK03545 86 ASHVLSALAWN---FTVLLISRIGIAF-AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG 161 (390)
T ss_pred HHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 99999999999 9999999999999 88888899999999999999999999999999999999999888654 8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHH
Q 016048 166 TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAA 245 (396)
Q Consensus 166 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (396)
||+.|++.+++.++..+..+..+||++++++ .+.++..+.+ ++|.++...
T Consensus 162 w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~-~~~~~~~~~ 211 (390)
T PRK03545 162 WRTTFLAIGGGALITLLLLIKLLPLLPSEHS-----------------------------GSLKSLPLLF-RRPALVSLY 211 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc-----------------------------chHHHHHHHH-hCcHHHHHH
Confidence 9999999998887776666566676533211 0111112222 566666555
Q ss_pred HHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH-H
Q 016048 246 IVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY-S 324 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~-~ 324 (396)
...++..........+.+.|+++..|.++.+.+......+++.++++ +..+++.||+++|+... +..+..++...+ .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~ 289 (390)
T PRK03545 212 LLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLLI-AIALLLVCLLLLLP 289 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHH-HHHHHHHHHHHHHH
Confidence 55555555555566788888888889999999999999999999999 77789999999876544 444444443333 3
Q ss_pred HhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 325 VAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 325 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
...+.+.... ..+.+++.....+.....+.|..| ++|++++|+.+...++|..+||.+.|.+.|+..-
T Consensus 290 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~ 358 (390)
T PRK03545 290 AANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL 358 (390)
T ss_pred HhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 3333333333 445566666666777788888876 6889999999999999999999999999998643
No 4
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.8e-37 Score=279.69 Aligned_cols=350 Identities=15% Similarity=0.173 Sum_probs=279.3
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
+.++...++..++.++..+.+|.+..+ .+.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~ 73 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLA--------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLI 73 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHH
Confidence 346778889999999999999998554 466778999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcc-----CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 88 SIIPLAILAYSR-----SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 88 ~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
..++..+..+.+ + ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+||.+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 74 RAVLVAVLPFVALLGGLN---IWQVYVLAGILAI-AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 888888887776 6 8999999999999 889999999999999999999999999999999999999999887
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHh-cCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC
Q 016048 163 FI----STSAAFQAATAGSIISAVYMRIF-LPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKS 237 (396)
Q Consensus 163 ~~----~~~~~f~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
.+ +||+.|++.++..++..+..+.. .||+++++++ + . + + +.. + +.++..+.+++
T Consensus 150 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---------~--~-~~~---~----~~~~~~~~~~~ 208 (365)
T TIGR00900 150 LMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ-A-L---------S--N-AVL---R----DTREGIKFVLK 208 (365)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc-c-c---------c--h-hHH---H----HHHhHHHHHHc
Confidence 65 89999988877666554443222 2222211110 0 0 0 0 000 0 01111223346
Q ss_pred ChhHHHHHHHHHHHHHhhhhhh-hhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQ-GSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
+|.++......++......... .+.|.|.++.+|.++.+.+.......++.+++. +..+++.||.+||+.+..+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 287 (365)
T TIGR00900 209 NPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAIFVI 287 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHHHHH
Confidence 7777777777666666665555 778888888789999999999999999999999 66789999999999988887777
Q ss_pred HHHHHHHHHhhh-hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 317 CVHMFLYSVAWS-SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 317 ~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+++...+....+ .+.... .++.+++.+...+...++..|.+|+++|+++.|+.+...+++..++|.+.|.+.|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 288 GLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777777766553 333333 455677788888999999999999999999999999999999999999999999875
No 5
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.8e-36 Score=283.30 Aligned_cols=371 Identities=12% Similarity=0.097 Sum_probs=292.7
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.+..+++..++..++..++...+|.+ .+|++.+..+.+|+.+.+.++...+++++|+++||+|||++++.+.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i--------~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTL--------SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45567888999999999999999999 4456777788999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCC-CcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV-PPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
+++.++.++++++++ ++.++++|+++|+ +.+...+.....+.+.+ |+++|++++++......+|..+||.+++.+
T Consensus 79 ~~~~~~~~~~~~a~~---~~~li~~r~l~G~-g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 79 TLFGLASLAAAFSPT---ASWLIATRALLAI-GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHHHHHHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999 9999999999999 88888888888776665 789999999999999999999999999876
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-ccccccc------------hhhhhhhhhhh------------
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDL-YTPILSS------------KAEISASCEES------------ 215 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~l~~~------------~~~~~~~~~~~------------ 215 (396)
+||+.|++...+.++..++..+.+||+++++++ .|..... ..+..+.....
T Consensus 155 ~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (495)
T PRK14995 155 LEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGAL 234 (495)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHH
Confidence 899999999888887777777788886543221 1111100 00000000000
Q ss_pred ---hhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHH
Q 016048 216 ---TKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQ 292 (396)
Q Consensus 216 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 292 (396)
.-...+.+.+++..+ ++.+ ++|.+....+..++......+...++|.|+++.+|+++.+++.......+...++.
T Consensus 235 ~l~~f~~~e~~~~~p~~~-~~lf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~ 312 (495)
T PRK14995 235 LLGLFIRTQLAASRPMID-MRLF-THRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSG 312 (495)
T ss_pred HHHHHHHHHhcCCCCCcC-HHHh-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000011112223322 2223 56777777777777777777778889999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh---hhhHHH-HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhh
Q 016048 293 LIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW---SSWVPY-AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC 368 (396)
Q Consensus 293 ~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 368 (396)
++.|++.||+|+|+.+..+..+..++...+.... +.+..+ ..++.+++.+...+.......+..|+++++.+.++
T Consensus 313 -~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 313 -PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAI 391 (495)
T ss_pred -HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHH
Confidence 7778999999999998888888877776655432 233223 35566888888888888889999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcc
Q 016048 369 ISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 369 ~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.++.+++|+.+|+.+.|.++++.
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998864
No 6
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6.1e-36 Score=276.93 Aligned_cols=370 Identities=15% Similarity=0.185 Sum_probs=268.7
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
+...++..+.+.++.....+..|.+ +++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEV--------AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4456788888888888898888887 44567788899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
+.+++.++++++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+
T Consensus 86 ~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 86 LFSAGTLACGFAPG---YITMFIARLVIGI-GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHh-hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 9999999999999 88999999999999999999999999999999999999999887754
Q ss_pred --h--hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC-h
Q 016048 165 --S--TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS-P 239 (396)
Q Consensus 165 --~--~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (396)
+ ||+.|++.++..++. ++....+||+++.+++++..++..++.++..+..+..+ ...+.......+..+++ +
T Consensus 162 ~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 238 (405)
T TIGR00891 162 VWGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIA--NIVMTLAAAMVQSAGKRWP 238 (405)
T ss_pred hcCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhh--hhhhhhhHHhhhhhhhhhH
Confidence 4 999998766555443 33446678765432211100000000000000000000 00000001111111111 1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
.+...................++|.|+.+.+|+++.+.+.......++.+++. ++.+++.||++||+.+..+.....+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~ 317 (405)
T TIGR00891 239 TFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVCSLLAGQLL 317 (405)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHHHHHHHHHH
Confidence 12222333333344445566788999988889999999999999999999999 77789999999999888777665333
Q ss_pred HH-HHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 320 MF-LYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 320 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.. .+....+.+.... ..+.+.......+....+++|.+|+++|++++|+.+...++|..++|.+.|.+.|+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 318 IIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32 2222223333222 2444555566677788899999999999999999999999999999999999999865
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=6.7e-36 Score=276.63 Aligned_cols=349 Identities=16% Similarity=0.130 Sum_probs=272.1
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
..+...+++.++.....+..|.+ .++++.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRM--------AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 34566777777777778888877 3356778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----
Q 016048 89 IIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI---- 164 (396)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~---- 164 (396)
.++.+++.++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+....+|..+++.++..+
T Consensus 91 ~~~~~~~~~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 91 GLFSLATAQAWD---FPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999988 9999999999999 88888899999999999999999999999999999999999888654
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHH
Q 016048 165 STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQA 244 (396)
Q Consensus 165 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (396)
+||+.|++.+++.++..+....++||+++++++++. ++ +++...++.++.. +.+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~-----------~~~~~~~~~~~~~-~~~~~~~~ 225 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA---------GK-----------QRAPVLRALFGEG-RATATLLL 225 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---------ch-----------hhhhhHHHHhhhh-hhhHHHHH
Confidence 799999988877776666666778887653321000 00 0000011111000 11222333
Q ss_pred HHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 016048 245 AIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS 324 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 324 (396)
....++.....+....+.|.|+++ .|+++.+.+......+++.+++. +..+++.||+++|+.+..+.....++.+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 226 WISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 333444444556667788999877 59999999999999999999999 7778999999999998887777766666665
Q ss_pred HhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 325 VAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 325 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..++.+.... .++.+++.....+...++..|.+|+++|+++.|+.+....+|..++|.+.|.+.++..
T Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 372 (406)
T PRK11551 304 AAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR 372 (406)
T ss_pred hcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC
Confidence 5554443333 4445666667788889999999999999999999999999999999999999998643
No 8
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.1e-36 Score=277.09 Aligned_cols=359 Identities=17% Similarity=0.181 Sum_probs=266.7
Q ss_pred HHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHH
Q 016048 16 VHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAIL 95 (396)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~ 95 (396)
+..++.....+..|.+ .++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++..++
T Consensus 5 ~~~~~~~~~~~~~~~~--------~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 5 INYLDRANLSFAAPML--------QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHHHHhhhHhHHHH--------HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 4445555666666665 44567788899999999999999999999999999999999999999999999999
Q ss_pred HhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHH
Q 016048 96 AYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQ 171 (396)
Q Consensus 96 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~ 171 (396)
+++++ ++.++++|++.|+ +.+...+....++.|++|+|+|++.+++.+...++|.+++|.+++.+ +||+.|+
T Consensus 77 ~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 152 (399)
T TIGR00893 77 AFAGA---YVSLYILRVLLGA-AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFI 152 (399)
T ss_pred HHHcC---HHHHHHHHHHHHH-HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHH
Confidence 99998 9999999999999 88999999999999999999999999999999999999999988864 8999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHH
Q 016048 172 AATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLS 251 (396)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (396)
+.+++.++..+...+..||++++++..+..++.. ..+...++.+++++.++++.+.++ ..++|.++...+..++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 227 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYI-VVGGLLAEQQGKGPSTPKKYQIKE----LLKDRRVWGLALGQFLV 227 (399)
T ss_pred HHHHHHHHHHHHhhheecCCCCccccCCHHHHhh-cchhhccccccccccCCCccchHH----HhcCHHHHHHHHHHHHH
Confidence 9888887777766666777654332111000000 000000000000111111112222 23577888888888888
Q ss_pred HHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh--HHHHHHHHHH----HHHHHHHH
Q 016048 252 NLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR--LLSFGLLFGC----VHMFLYSV 325 (396)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~----i~~~~~~~ 325 (396)
.........+.|.|+++.+|.++.+.+.......+..+++. ++.+++.||++||+ .......... .+......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T TIGR00893 228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT 306 (399)
T ss_pred HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 88888888999999999889999999999999999999999 77789999999886 1111111111 11111111
Q ss_pred --hhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 326 --AWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
....+.......++.+.....+...++..|.+|+++|++++|+.+...++|+.++|.+.|.+.|..+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 307 NYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred ccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 1122222223333333334688999999999999999999999999999999999999999998764
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6e-36 Score=270.79 Aligned_cols=329 Identities=13% Similarity=0.049 Sum_probs=245.1
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA 96 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~ 96 (396)
+...+..+.|.+|.+ ++|++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.....
T Consensus 3 ~~~~~~~~~~~lp~i--------~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 3 SQAIWVTFSPVLSLV--------AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL 74 (368)
T ss_pred hhHHHHHHHhhHHHH--------HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 445566778888888 556788889999999999999999999999999999999987766555555443333
Q ss_pred hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHH
Q 016048 97 YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQA 172 (396)
Q Consensus 97 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~ 172 (396)
..++ ++.++++|+++|+ +.+. .+.....++|++|+|+|++++++.+.+..+|.+++++++..+ +||+.|++
T Consensus 75 ~~~~---~~~l~~~R~l~G~-g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~ 149 (368)
T TIGR00903 75 DPFN---YEWLLACQLLAAL-GQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIP 149 (368)
T ss_pred Hhcc---HHHHHHHHHHHHh-HhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 3367 9999999999999 8775 456666779999999999999999999999999998888776 99999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHH
Q 016048 173 ATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSN 252 (396)
Q Consensus 173 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
.++++++..++.++.+||+|++++++. + .++. . +++++.+ ++|.++...+..++..
T Consensus 150 ~~~l~~~~~~~~~~~lp~~p~~~~~~~-----------~-----~~~~-~---~~~~~ll----~~~~~~~~~~~~~~~~ 205 (368)
T TIGR00903 150 IAAVAAAGIILVLAALPALPFQAAEGF-----------G-----FKDA-V---KEFGALA----GRKDLWIIGAILGFGV 205 (368)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCc-----------c-----hHHH-H---HHHHHHH----cChhHHHHHHHHHHHH
Confidence 999888887778888999875432100 0 0000 0 0133332 6788888888899999
Q ss_pred HhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcc---hhH-HHHHHHHHHHHHHHHHHhhh
Q 016048 253 LADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGE---ARL-LSFGLLFGCVHMFLYSVAWS 328 (396)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---~~~-~~~~~~~~~i~~~~~~~~~~ 328 (396)
..++++.+|+|.|+++ .|++.. .+.......+.+.++. +++.||..| |+. ......+.++....+....+
T Consensus 206 ~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~ 279 (368)
T TIGR00903 206 ALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELN 279 (368)
T ss_pred HHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999976 478764 5666666666555554 567777643 333 22233444444444444333
Q ss_pred hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 329 SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
...... ..+.+++.....+..+++.+|.+|++.||++.|+.+..+++++..+|.+.+.+.
T Consensus 280 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 280 RLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred cHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 332222 333345556666778899999999999999999999999999999999998777
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.9e-35 Score=275.18 Aligned_cols=364 Identities=11% Similarity=0.052 Sum_probs=262.3
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
..++..+...+......+.+|.+ .++++.+..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEM--------LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 34555666666666677778877 4456788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----
Q 016048 89 IIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI---- 164 (396)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~---- 164 (396)
+++.++.+++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+...++|..++|.+++.+
T Consensus 99 ~~~~~~~~~~~~---~~~l~~~~~l~g~-~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 99 GIINILFGFSSS---LWAFALLWVLNAF-FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHHHhH---HHHHHHHHHHHHH-HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999998 9999999999998 88888889999999999999999999999999999999999887764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhh-hhcCChhHHH
Q 016048 165 STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVH-LLKSSPTFSQ 243 (396)
Q Consensus 165 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 243 (396)
+||+.|++.+++.++..+...+.+||+|++...++. ++.+++. .+ ..++.++++.+.++.++ ...+++.++.
T Consensus 175 gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (434)
T PRK11663 175 GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSV-GEWRHDA---LE---LAQQQEGAGLSRKEILTKYVLLNPYIWL 247 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCc-ccccccc---cc---cchhccccCCChhhhHHHHHhcChHHHH
Confidence 899999998887776666566677887643211100 0000000 00 00000111123333332 2335677777
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh--cchhHH-HHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV--GEARLL-SFGLLFGCVHM 320 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~-~~~~~~~~i~~ 320 (396)
..+..++....+.....++|.|+.+.+|++..+.+...+...++..++. ++.+++.||+ ++|+.. ........+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~ 326 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRGPMNLIFAAGILLSV 326 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCccHHHHHHHHHHHHHH
Confidence 7777777777777788899999988889999999999999999999999 7778999998 333222 22111111111
Q ss_pred HHHHH--hhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 321 FLYSV--AWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 321 ~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..+.. ..+...... .+.++++.............|..|+++||++.|+.+...++|..++|.+.|++.|+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 327 GSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred HHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc
Confidence 11111 111111111 2222222222222344567899999999999999999999999999999999999754
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.5e-35 Score=267.24 Aligned_cols=326 Identities=12% Similarity=0.078 Sum_probs=253.7
Q ss_pred cccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCc
Q 016048 22 SMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSR 101 (396)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~ 101 (396)
....|.+|.+ ++|++.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.++++++++
T Consensus 26 ~~~~~~lp~i--------~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQL--------RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 5667888888 5567888999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHH
Q 016048 102 NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATAG 176 (396)
Q Consensus 102 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~ 176 (396)
++.++++|+++|+ +.+...+....++.|++| ++|+++++.+..+...|..+|+.++..+ +||+.+...++.
T Consensus 97 --~~~ll~~r~l~Gi-g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGV-GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHh-HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999 888888899999999997 8899999999988878877777766653 799887766555
Q ss_pred HHHHHHHHHHhcCC-CCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhh
Q 016048 177 SIISAVYMRIFLPE-SVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLAD 255 (396)
Q Consensus 177 ~~~~~~~~~~~~~e-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (396)
.++..+ .++...+ .|++++ +++ .+.++ .+ ++++.+...+..++....+
T Consensus 173 ~~~~~~-~~~~~~~~~~~~~~-------------------------~~~-~~~~~---~l-~~~~~~~l~~~~~~~~~~~ 221 (393)
T PRK09705 173 AVVALF-AWWWQSAREVASSH-------------------------KTT-TTPVR---VV-FTPRAWTLGVYFGLINGGY 221 (393)
T ss_pred HHHHHH-HHHHHhcCCCcccc-------------------------CCC-cCCcc---cc-cCHhHHHHHHHHHHHHHHH
Confidence 443332 2222222 111100 000 01111 12 3455666666666666777
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAA 335 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 335 (396)
.....++|.|+++ +|++..+.+...+..+++.++++ +..+++.||++||+....+..+..++...+...+........
T Consensus 222 ~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK09705 222 ASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWA 299 (393)
T ss_pred HHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 7888899999987 69999999999999999999999 777899999999999888887777776655433322222223
Q ss_pred HHHHHhhhhhhhhhhHHHhhccC-CccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 336 AVFSILSVFSHPCLRTIVSKQVA-SNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.+.+++.+...|.......+..+ ++++|+.+|+.+...+++..++|.+.|++.|+.++
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44566677777777777677774 57899999999999999999999999999998654
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2e-35 Score=277.63 Aligned_cols=361 Identities=13% Similarity=0.069 Sum_probs=262.5
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
+++..++.+++.....+..|.+ .+|++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 34 ~~~~~~~~y~~r~~~~~~~~~i--------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 34 VFIGYLTMYLIRKNFKAAQNDM--------ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHhcChhhhhHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 3444555566677777888877 45678888999999999999999999999999999999999998888887
Q ss_pred HHHHHHHh-----ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 90 IPLAILAY-----SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 90 ~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
+.....++ +++ ++.+++.|+++|+ +.+...|...++++|++|+++|++++++.+.+.++|.++++.+....
T Consensus 106 ~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 106 ICMLGFGASLGSGSVS---LGLMIALWALSGF-FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHhcccch---HHHHHHHHHHHHH-HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 77766654 567 9999999999999 88888899999999999999999999999999999999998876532
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHH-hhhhc
Q 016048 165 -------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDM-VHLLK 236 (396)
Q Consensus 165 -------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (396)
+||..|.+.+++.++..++.+++.+|+|++.+..+. ++. .++... .++++.++++.+.++. .+...
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~----~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 255 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA----EEI-FGEPIS-EEDKETESTDMTKWQIFVEYVL 255 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh----hhc-ccCccc-hhhhccccccCcHHHHHHHHHH
Confidence 488888888888777766666667776543221000 000 000000 0000000111122222 22234
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
++|.++...+..++......+...++|.|+++.+|++..+.+...+...++..++. ++.|+++||+++|+.........
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~~~~~~ 334 (467)
T PRK09556 256 KNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVACIALA 334 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHHHHHHH
Confidence 67888888888888887778888999999999899999999999998999999999 78899999999988766554443
Q ss_pred HHHHHHHH--HhhhhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHH-HHHhhhhhhhhhhh
Q 016048 317 CVHMFLYS--VAWSSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSF-ANLVSPLAFSPLTG 389 (396)
Q Consensus 317 ~i~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~ 389 (396)
.++...+. ...+.... ...++++.+.............|.+|++++|++.|+.+...++ |..++|.+.|.+.|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 335 LIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 33322222 22222222 2223334322222223346677999999999999999999996 77999999999999
No 13
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=257.78 Aligned_cols=364 Identities=15% Similarity=0.147 Sum_probs=287.3
Q ss_pred hHHHHHHHHHHhhcc----ccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 8 SHLFITIFVHCFSTS----MVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
+.+++..++.+.++. ...-..|.+ .+|.++|..|.|++.+.+++.+.++-.+.|.++||.+.|+.+..
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l--------~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPAL--------IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 344555555555544 444555555 44556888999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH--
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA-- 161 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-- 161 (396)
+++++++..++++++++ ++.+.++-+++|+ .+|.-+|.+...++.|+|++|||+..++.+.+.++|..+.|++.
T Consensus 100 gLilsai~nil~Gfs~s---~~~~~~l~~lng~-fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l 175 (448)
T COG2271 100 GLILSAIVNILFGFSPS---LFLFAVLWVLNGW-FQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL 175 (448)
T ss_pred HHHHHHHHHHHHhhhhH---HHHHHHHHHHHHH-HhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH
Confidence 99999999999999998 9999999999999 99999999999999999999999999999999999999888877
Q ss_pred HHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhcc-CCChhHHhhhhc
Q 016048 162 RFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKR-LPSIDDMVHLLK 236 (396)
Q Consensus 162 ~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 236 (396)
+++ +||..|++.++++++..++.++..+|+|++..-.+. ++.++| ..+.++++++++ ...++...+.+.
T Consensus 176 a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i-e~~~~d-----~~e~~~~~~~~~~ls~~~i~~~YVL 249 (448)
T COG2271 176 AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI-EEYRGD-----PLEIYEEEKENEGLTAWQIFVKYVL 249 (448)
T ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH-HHhhcC-----chhhhhhhccCCCccHHHHHHHHHH
Confidence 554 799999999999999999998999999875431110 000000 000001111111 223445566677
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh--cchhHH-HHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV--GEARLL-SFGL 313 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~-~~~~ 313 (396)
+||.+|.++++.++....-++++.|.|.|+.|..|+|..+++...+.+-.++++++ ++.|+++||+ |||... .+..
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccccchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999 7889999996 555544 3444
Q ss_pred HHHHHHHHHHHHhhhh--hHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHH-HHHhhhhhhhhhhh
Q 016048 314 LFGCVHMFLYSVAWSS--WVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSF-ANLVSPLAFSPLTG 389 (396)
Q Consensus 314 ~~~~i~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~ 389 (396)
+...++...+...++. +.... .+++|+...+-.-..-....|..|.+..|++.|+...+.++ |...+....|++.|
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 4445555555555433 22222 34445555555556667789999999999999999999998 99999999999887
Q ss_pred c
Q 016048 390 D 390 (396)
Q Consensus 390 ~ 390 (396)
.
T Consensus 409 ~ 409 (448)
T COG2271 409 T 409 (448)
T ss_pred c
Confidence 6
No 14
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4.9e-36 Score=272.24 Aligned_cols=343 Identities=24% Similarity=0.350 Sum_probs=266.7
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
+++..++..++.....+.+|.+. .++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~ 73 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYL-------AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HH-------HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH-------HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence 45678888889999999999433 34567777889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----h
Q 016048 90 IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----S 165 (396)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~ 165 (396)
++.++..++++ .+.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+ +
T Consensus 74 ~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~ 149 (352)
T PF07690_consen 74 LGSLLLAFASN---FWLLLIARFLLGI-GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG 149 (352)
T ss_dssp HHHHHHHHHCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH
T ss_pred hHHHHhhhhhh---HHHHhhhcccccc-ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc
Confidence 99776667677 7799999999999 88999999999999999999999999999999999999999999876 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHH
Q 016048 166 TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAA 245 (396)
Q Consensus 166 ~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (396)
||+.|++.+++.++..++...+++++++++++++.. +++++.+ +++++.++.+++++.++...
T Consensus 150 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~--------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 212 (352)
T PF07690_consen 150 WRWAFLISAILSLIAAILFILFLPEPPPPRERESPK--------------ESESKKP---KPLKPGFKSLFKNPVLWILL 212 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST--------------TTT--HH---HCCCH-CTHHHHHHCCHHHH
T ss_pred cccccccccchhhhhhhhHhhhhhhccccccccccc--------------ccccccc---cccccccccccccchhhhhh
Confidence 999999999999888776556666655443311000 0000011 11222222233556555455
Q ss_pred HHHHHHHHhhhhhhhhHHHHhhhhcccc-ccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 016048 246 IVAFLSNLADAGLQGSMMYYLKAKFHFN-KNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS 324 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 324 (396)
...++..+.......+.|.|+.+.+|++ ..+.+......++...++. ++.+++.||+++|+..........+....+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 213 IAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILGALGLL 291 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 5555555566778889999988888999 7888988999999999998 7778999999987777766666666555554
Q ss_pred Hhhh----hhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhh
Q 016048 325 VAWS----SWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSP 381 (396)
Q Consensus 325 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 381 (396)
.... .+......+.+++.+...+...++..|.+|++++|++.|+.+...+++..++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 292 LLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3322 23333456678888888999999999999999999999999999999999987
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=6.1e-35 Score=276.62 Aligned_cols=369 Identities=14% Similarity=0.148 Sum_probs=289.4
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
+..+++..++..++..+..+.+|.+ .++++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~--------~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 75 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTI--------AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHH
Confidence 4456778888889999999999998 44556777889999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
+..++.++++++++ ++.++++|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++.+
T Consensus 76 ~~~~~~~~~~~~~~---~~~l~~~~~~~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 76 AFTLGSLLCGVAPN---LELMIIFRVIQGF-GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred HHHHHHHHHhCcCC---HHHHHHHHHHHHh-hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 99999999999999 9999999999999 88889999999999999999999999999999999999999998875
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc-ccccc----------------cchhhhhhhhhhhh---------
Q 016048 165 --STSAAFQAATAGSIISAVYMRIFLPESVRDEDL-YTPIL----------------SSKAEISASCEEST--------- 216 (396)
Q Consensus 165 --~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~l~----------------~~~~~~~~~~~~~~--------- 216 (396)
+||+.|++.+.+.++..++..+.+||+++++++ .|... +.+++++.+.....
T Consensus 152 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (485)
T TIGR00711 152 NYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVA 231 (485)
T ss_pred CcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHH
Confidence 899999998888877777776777775443221 11100 00000000000000
Q ss_pred ---hhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHH
Q 016048 217 ---KKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQL 293 (396)
Q Consensus 217 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 293 (396)
....+.+++++..+ .+.+ ++|.++...+..++..+..++...++|.|+++.+|+++.+.+.......++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~- 308 (485)
T TIGR00711 232 IIAFVVWELTDDNPLVD-LRLF-KYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS- 308 (485)
T ss_pred HHHHHHHHHcCCCCccC-HHHH-cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-
Confidence 00001111122221 1222 56777777777777777778888899999999899999999999999999999999
Q ss_pred HHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHh--h--hhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhh
Q 016048 294 IMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVA--W--SSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC 368 (396)
Q Consensus 294 ~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~--~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 368 (396)
++.+++.||++||+.+..+..+.+++..++... + +.+.. ....+.+++.+...+.......+..|++++++++|+
T Consensus 309 ~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~ 388 (485)
T TIGR00711 309 PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSL 388 (485)
T ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHH
Confidence 777899999999999998888888887776631 1 12222 224556777777777777888888999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhc
Q 016048 369 ISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 369 ~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.+..+.+|+.+++.+.|.++++
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.5e-34 Score=263.90 Aligned_cols=332 Identities=13% Similarity=0.148 Sum_probs=254.1
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA 96 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~ 96 (396)
.........+.+|.+ .++++.+..+.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~--------~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 32 LIIVEFLPVSLLTPM--------AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHHHhhHHHH--------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH
Confidence 333334555667776 446788889999999999999999999999999999999999999999999999999
Q ss_pred hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHH
Q 016048 97 YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQA 172 (396)
Q Consensus 97 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~ 172 (396)
++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.....++|..+||.+++.+ +||+.|++
T Consensus 104 ~~~~---~~~l~~~r~l~G~-~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~ 179 (394)
T PRK10213 104 FANS---FSLLLIGRACLGL-ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNA 179 (394)
T ss_pred HHCh---HHHHHHHHHHHHH-hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 9988 9999999999999 88889999999999999999999999999999999999999988865 89999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHH
Q 016048 173 ATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSN 252 (396)
Q Consensus 173 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
.+++.++..+.....+||+++++++ ..++.++ .+ ++|.++...+..++..
T Consensus 180 ~~~l~~~~~l~~~~~~p~~~~~~~~--------------------------~~~~~~~---~l-~~~~~~~~~~~~~~~~ 229 (394)
T PRK10213 180 AAVMGVLCIFWIIKSLPSLPGEPSH--------------------------QKQNTFR---LL-QRPGVMAGMIAIFMSF 229 (394)
T ss_pred HHHHHHHHHHHHHHHCCCCCccccc--------------------------chhHHHH---Hh-cCHHHHHHHHHHHHHH
Confidence 8877776555554556765422110 0001222 22 5677766655555555
Q ss_pred HhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 016048 253 LADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVP 332 (396)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 332 (396)
........+++.++.+++|+++.+.+......+++.+++. .+.+++.||.+++.............+++....++.+..
T Consensus 230 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 308 (394)
T PRK10213 230 AGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVA 308 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 5555556666444445669999999999999999999999 777899999654433443333344434444444444433
Q ss_pred HH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 333 YA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 333 ~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.. .++.+++.+...+...+.+.+..| ++++++.+......++|..+||.+.|.++|..+
T Consensus 309 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g 368 (394)
T PRK10213 309 TGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG 368 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33 455677788888888888998887 667788888888889999999999999999754
No 17
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=8.7e-35 Score=266.48 Aligned_cols=334 Identities=15% Similarity=0.088 Sum_probs=258.4
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccC
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRS 100 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
.....+.+|.+ .++++.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++
T Consensus 19 ~~~~~~~~~~~--------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPL--------GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 44556677776 4456788899999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHH
Q 016048 101 RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAG 176 (396)
Q Consensus 101 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~ 176 (396)
++.++++|++.|+ +.+...+.....+.|++| |+|+++.++...+.++|..+++.+...+ +||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASA-GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhH-HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999999999999 888888888888999987 6799999999999999987755444432 799999999998
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhh
Q 016048 177 SIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADA 256 (396)
Q Consensus 177 ~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (396)
.++..+..++++||+++++++++ + +.++++.+.++. + +++.++......++......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~-------------~------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 222 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTN-------------I------EVSVKDYTVWEM---L-RTPQFWVLYLSFFLNAVSGL 222 (377)
T ss_pred HHHHHHHHHHheecCchhccccC-------------c------ccchhhhhHHHH---H-cCccHHHHHHHHHHHhHHHH
Confidence 88877776666666543221100 0 000000112222 2 45666666555555555555
Q ss_pred hhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhh--HH-H
Q 016048 257 GLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSW--VP-Y 333 (396)
Q Consensus 257 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~--~~-~ 333 (396)
....+.+.|.++ +|.++.+.+.......+...+++ +..+++.||++||+.+..+.....++.+.+...++.. .. .
T Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T TIGR00890 223 LLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLA 300 (377)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHH
Confidence 555666777654 58888888889999999999999 7778999999999999888888888877766654322 12 1
Q ss_pred HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 334 AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
...+.+.+.+...+...++..|.+|+++|+++.|+.+....+|..++|.+.|.+.|+.+
T Consensus 301 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 359 (377)
T TIGR00890 301 TVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG 359 (377)
T ss_pred HHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 23344566666677778889999999999999999999999999999999999988654
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.9e-34 Score=268.96 Aligned_cols=362 Identities=14% Similarity=0.107 Sum_probs=253.4
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHH-HHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGF-QQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~-~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
+....++.+++.++..++....|....+.. ++.++ .......+ ..++..++..+++++.|+++||+|||+++..+.
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADP--SVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 444567889999999988888776644432 22211 11111122 357888999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHH--------HHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 86 TLSIIPLAILAYSRSRNFFY--------AYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
++++++.++++++++ ++ .++++|+++|+ +.|...+...++++|++|+++|+++.++...+..+|..+|
T Consensus 95 ~l~~i~~~~~a~~~~---~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 95 VIMSISTFCIGLIPS---YATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999 65 38899999999 9999999999999999999999999999998888888877
Q ss_pred HHHHH------------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccC
Q 016048 158 TISAR------------FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRL 225 (396)
Q Consensus 158 ~~~~~------------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 225 (396)
+.+.. ..+||+.|++.+++.++ .++....+||+|+..++++..+ ++++ +...++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~-------~~~~----~~~~~~~~ 238 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLE-------QGDR----EGLQDGPK 238 (490)
T ss_pred HHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh-------hhcc----cccccccc
Confidence 65442 24899999997765554 3444567888876432110000 0000 00001122
Q ss_pred CChhHHhhhhcCC-hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc
Q 016048 226 PSIDDMVHLLKSS-PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG 304 (396)
Q Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 304 (396)
.++++.++ ++ +.........++....+++...++|.|+++.+|++..+.+.......++..++. ++.++++||+|
T Consensus 239 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g 314 (490)
T PRK10642 239 VSFKEIAT---KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLSDRFG 314 (490)
T ss_pred CCHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc
Confidence 34555432 22 222222233344556677788899999988889988877777777778888888 67789999999
Q ss_pred chhHHHHHHHHHHHHHHH-HHHhh--hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhh
Q 016048 305 EARLLSFGLLFGCVHMFL-YSVAW--SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVS 380 (396)
Q Consensus 305 ~~~~~~~~~~~~~i~~~~-~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 380 (396)
||+.+..+.+...+.... +.... +...... .++.+++.+...+....+..|.+|++.|+++.|+.+.....++.++
T Consensus 315 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~ 394 (490)
T PRK10642 315 RRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLT 394 (490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHH
Confidence 999887776543332222 22211 2222222 3334555555566677788899999999999998777777888999
Q ss_pred hhhhhhhhhcc
Q 016048 381 PLAFSPLTGDC 391 (396)
Q Consensus 381 ~~~~g~l~~~~ 391 (396)
|.+.|++.+..
T Consensus 395 p~i~g~l~~~~ 405 (490)
T PRK10642 395 PTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 19
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.9e-35 Score=268.98 Aligned_cols=361 Identities=12% Similarity=0.082 Sum_probs=264.3
Q ss_pred HHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHH
Q 016048 14 IFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLA 93 (396)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~ 93 (396)
.+...+......+..|.+ .++++.+..+.|++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~--------~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYL--------VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhHHHHhHHhhhhhhHHH--------HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 345556666666777766 335677788999999999999999999999999999999999999999999999
Q ss_pred HHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHH-HHHHH----hhhHH
Q 016048 94 ILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGT-ISARF----ISTSA 168 (396)
Q Consensus 94 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~----~~~~~ 168 (396)
+.+++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++.+....+|..++| .++.. .+||+
T Consensus 76 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 76 FFGFSTS---LWVMAALWALNGI-FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred HHHHhhh---HHHHHHHHHHHHh-hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 9999998 9999999999999 88988999999999999999999999999999999999998 35443 38999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHH
Q 016048 169 AFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVA 248 (396)
Q Consensus 169 ~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (396)
.|++.+++.++..+..++..||++++++.++..++. + ++.++ ++++++++....++..+.+.++|.++...+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP-N---EEPDG--DAEKKEEELTKKQIFLQYVLLNKVLWYISLGY 225 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccCc-c---ccccc--ccccccccccchHHHHHHHHhcchHHHHHHHH
Confidence 999988888777676667777766543211100000 0 00000 00001111112222233344677788777777
Q ss_pred HHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc-chhHHH-HHH-HHHHHHHHHHHH
Q 016048 249 FLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG-EARLLS-FGL-LFGCVHMFLYSV 325 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~-~~~-~~~~i~~~~~~~ 325 (396)
++..........+.|.|+++.+|+++.+.+.......+..+++. ++.+++.||.. +|+... ... ....++......
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 226 VFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 77777778888899999998889999999999999999999999 77789999863 333222 211 112222222222
Q ss_pred h--hhhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 326 A--WSSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 326 ~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
. .+.... ......+.......+....+..|.+|+++|+++.|+.+....+|+.++|.+.|.+.|+.+-
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 305 NPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred CcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 1 111211 2233334444445556677889999999999999999999999999999999999998654
No 20
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=9.9e-34 Score=259.55 Aligned_cols=344 Identities=13% Similarity=0.145 Sum_probs=263.0
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
++.++.+....+....+.....|.+|.+ .+|++.+..+.|+..+.+.+++.+++++.|+++||+|||+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTEL--------AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHH--------HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 3556778888889999999999999988 44567788899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF 163 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 163 (396)
+.++.+++.++++++++ ++.+++.|++.|+ +.+...+....++.|+.|+++|+++++....+..+|..++|.+++.
T Consensus 74 ~~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 74 LVALCVIGNAMFTLSSS---YLMLAIGRLVSGF-PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 9999999999999 8888888888999999999999999999999999999999888776
Q ss_pred h----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCCh
Q 016048 164 I----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSP 239 (396)
Q Consensus 164 ~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (396)
+ +||+.|++.+++.++..+..+..+||.+++++. +.++.++.+ +++
T Consensus 150 l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~-----------------------------~~~~~~~~~-~~~ 199 (382)
T PRK10091 150 LSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG-----------------------------GLREQFHFL-RSP 199 (382)
T ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc-----------------------------CHHHHHHHh-cCh
Confidence 4 899999999988777766666678875432110 000111122 344
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
..+.......+..........+++.|+.+.+|+++.+.+...+..+++.++++ ++.+++.||+++|+.+..+..+..++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~~~i~ 278 (382)
T PRK10091 200 APWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFIIVLA 278 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHHHHHH
Confidence 44444444444333344445667778887789999999999999999999999 77789999999999988888887777
Q ss_pred HHHHHHh-hhhhHHHH-HHHHHHhhhhhhhhhh-HHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 320 MFLYSVA-WSSWVPYA-AAVFSILSVFSHPCLR-TIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 320 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.+++... ++.+.... ..+.+.+.....+... ....+..|++.++.+. .+....+|..+||.+.|.++|...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~ 352 (382)
T PRK10091 279 LLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGL 352 (382)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHccc
Confidence 7655443 33332222 2333444433344333 3444545555555543 467788999999999999999753
No 21
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.3e-34 Score=278.61 Aligned_cols=366 Identities=16% Similarity=0.178 Sum_probs=265.8
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
.+..+...+....+.+.+|.+ ..+++.+..+.+++.+++.++.+++++++|+++||+|||++++++.++.++
T Consensus 173 ~l~~~~~g~d~~~is~ilp~i--------~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i 244 (742)
T TIGR01299 173 GLALMADGVEVFVVGFVLPSA--------EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF 244 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 334444455555667777776 335667778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh------
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI------ 164 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~------ 164 (396)
+.++++++++ ++.++++|++.|+ +.++..+...+++.|++|+++|++.++++...+.+|.++++.++..+
T Consensus 245 ~~ll~afa~s---~~~llv~R~l~G~-g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 245 FAFFSSFVQG---YGFFLFCRLLSGF-GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999998 9999999999999 88999999999999999999999999999999999999988765432
Q ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-------ccccccccchhhhh-----hhhh-------h
Q 016048 165 -----------STSAAFQAATAGSIISAVYMRIFLPESVRDE-------DLYTPILSSKAEIS-----ASCE-------E 214 (396)
Q Consensus 165 -----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~-------~~~~~l~~~~~~~~-----~~~~-------~ 214 (396)
+||+.+++.++..++. ++..+++||+|+.. +..+.+++....+. +.+. .
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 5888888877765554 44568899998741 11222222111100 0000 0
Q ss_pred hhhhh---hhhccCC----------------ChhHHhhhhcC--ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh----
Q 016048 215 STKKL---QVFKRLP----------------SIDDMVHLLKS--SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK---- 269 (396)
Q Consensus 215 ~~~~~---~~~~~~~----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 269 (396)
..+.+ +.++... .|.+..+++++ .+....+++..++..+.++++..|+|.++++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~ 479 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADD 479 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 01122222221 12334566677788888999999999875431
Q ss_pred c-----------------ccccc---------------------------------------------------------
Q 016048 270 F-----------------HFNKN--------------------------------------------------------- 275 (396)
Q Consensus 270 ~-----------------g~~~~--------------------------------------------------------- 275 (396)
+ +++..
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 559 (742)
T TIGR01299 480 YAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENT 559 (742)
T ss_pred HHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcccc
Confidence 0 00000
Q ss_pred ------------------------------------chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 276 ------------------------------------QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 276 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
.......+.+++.+++. ++.++++||+|||+++..+.++.+++
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~lsai~ 638 (742)
T TIGR01299 560 DFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVLSCIS 638 (742)
T ss_pred chhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 01233455668888888 77789999999999999999999999
Q ss_pred HHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 320 MFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.+++++..+....++ .++++++.+..++...++++|.+|++.|++++|+.+....+|.+++|.+.|.+.+.
T Consensus 639 ~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 639 CFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888877665443333 44556666777888999999999999999999999999999999999999988764
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.2e-33 Score=259.78 Aligned_cols=346 Identities=18% Similarity=0.179 Sum_probs=270.1
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+++....+....++..++..+..|.+|.+ .++++.+..+.|++.+++.++..+++++.|+++||+|||+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--------~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 74 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPEI--------AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL 74 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 44445555666677778889999999988 4456778889999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
.+.++.+++.++..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|+++++..+....+|..++|.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 75 LGLFIFALSSLGLALSNN---IETLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 9999999999999 889999999999999999999999999999999999999998887
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 163 FI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 163 ~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
.+ +||+.|++.++..++..+..++..||+++++++++ .+ ...++.. ...++
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~~~-~~~~~ 205 (385)
T TIGR00710 151 YILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ-----------------IS-------TYFETFL-LLLKS 205 (385)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC-----------------HH-------HHHHHHH-HHHcC
Confidence 64 79999999888887777766667777654332100 00 0011111 12256
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|.++...+..............+.|.++++.+|+++.+.+.......++.+++. ++.+++.||+++|+.+..+..+..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~ 284 (385)
T TIGR00710 206 KMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLILFAV 284 (385)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 666666666555555566667778888888889999999999999999999999 7778999999999988888777777
Q ss_pred HHHHHHHhh----hhh-HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 319 HMFLYSVAW----SSW-VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 319 ~~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
+..++.... ..+ .... ..+.+.+.+...+.......|..| ++++++.++.+.....++.+.+.+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 285 SAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666555432 111 1222 334566777778888888888887 6899999999998886666666666643
No 23
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.5e-34 Score=266.86 Aligned_cols=353 Identities=16% Similarity=0.134 Sum_probs=273.5
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+++.+..++...++..++.++..+.+|.+..+ .+.+..+.|++.+.+.++..+++++.|+++||+|||+++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 15 THPAFRAVFIARFISIFGLGLLGVAVPVQIQM--------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 34566677888899999999999999998554 3456788999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHh-----ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 83 VPITLSIIPLAILAY-----SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
.+..+.+++.+..+. .++ ++.+++.|++.|+ +.+...+...+++.|+.|+++|+++.++.+...++|..+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 162 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS 162 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH
Confidence 988888777665542 345 7888999999999 8787888889999999999999999999999999999999
Q ss_pred HHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhh
Q 016048 158 TISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVH 233 (396)
Q Consensus 158 ~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
|.+++.+ +|++.|++.++..++..++ .+.+||+++++++++ ++.++.++.++
T Consensus 163 ~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~-----------------------~~~~~~~~~~~ 218 (417)
T PRK10489 163 PALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPALPPPPQPRE-----------------------HPLRSLLAGFR 218 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCCCCCCcccc-----------------------cchHHHHHHHH
Confidence 9988765 7899998877766655443 456776543321000 00001112222
Q ss_pred hhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHH
Q 016048 234 LLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGL 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 313 (396)
..+++|.++...+..++... ..+...++|.|.++.+|.++.+.+.+.+...++.+++. ++.+++.||.++++.+..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~~~~ 296 (417)
T PRK10489 219 FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLMLLST 296 (417)
T ss_pred HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHHHHH
Confidence 33456666555544444332 34567788999998789999999999999999999999 67789999877777888877
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 314 LFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 314 ~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.+..++.+++...++.+.... .++.+++.+...+...++..|..|+++||+++|+.+...++|..++|.+.|.+.|..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g 376 (417)
T PRK10489 297 LGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT 376 (417)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc
Confidence 777777776665555443333 4445666666677788899999999999999999999999999999999999999765
Q ss_pred C
Q 016048 393 F 393 (396)
Q Consensus 393 ~ 393 (396)
.
T Consensus 377 ~ 377 (417)
T PRK10489 377 P 377 (417)
T ss_pred h
Confidence 4
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=261.72 Aligned_cols=356 Identities=14% Similarity=0.103 Sum_probs=247.3
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhcc-CCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAV-CPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
+...++..+++.++........|.+..+.. +...++ ..........++..++..+++++.|+++||+|||+++..+.
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~ 101 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA--MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTV 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHH
Confidence 344566788888888877777665544422 111111 11111122234566778899999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHH--------HHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 86 TLSIIPLAILAYSRSRNFFY--------AYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
++++++.++++++++ ++ .++++|+++|+ +.+..++....++.|++|+|+|++..+..+.+..+|.+++
T Consensus 102 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 102 WMMGIATALIGLLPS---FSTIGWWAPVLLVTLRAIQGF-AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHh-hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999 55 58899999999 9999999999999999999999999999999999998888
Q ss_pred HHHHH------------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccC
Q 016048 158 TISAR------------FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRL 225 (396)
Q Consensus 158 ~~~~~------------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 225 (396)
+.+.. ..+||++|++.+++.++. +......||+|+..+++ ++.++.+++
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~------------------~~~~~~~~~ 238 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQ------------------HEQAAAKKR 238 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHH------------------hhccccccc
Confidence 65543 248999999887765443 33334566665432210 000000111
Q ss_pred CChhHHhhhhcCChhHHHHH-HHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc
Q 016048 226 PSIDDMVHLLKSSPTFSQAA-IVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG 304 (396)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 304 (396)
.+..+ .++++++.+... ...++.....+....+.|.|.++.+|++...........++...++. ++.|+++||++
T Consensus 239 ~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g~l~Dr~g 314 (438)
T PRK09952 239 IPVIE---ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFAWLADRFG 314 (438)
T ss_pred CCHHH---HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence 12222 122344444333 34445555667778899999988888888765555556677777777 67789999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHh--h-h-hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHH
Q 016048 305 EARLLSFGLLFGCVHMFLYSVA--W-S-SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FANL 378 (396)
Q Consensus 305 ~~~~~~~~~~~~~i~~~~~~~~--~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~ 378 (396)
||+.+..+.++..++.+.+... . + .+.... ..+.+++.+...+...++..|.+|+++|+++.|+.+.... +++.
T Consensus 315 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~ 394 (438)
T PRK09952 315 RRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGG 394 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHH
Confidence 9998887766655544333221 1 1 222222 2333556666678888999999999999999999766654 8999
Q ss_pred hhhhhhhhhhhcc
Q 016048 379 VSPLAFSPLTGDC 391 (396)
Q Consensus 379 ~~~~~~g~l~~~~ 391 (396)
++|.+.+++.|..
T Consensus 395 ~~p~i~g~l~~~~ 407 (438)
T PRK09952 395 FTPFIAAALVTYF 407 (438)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998854
No 25
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=2.3e-33 Score=258.08 Aligned_cols=345 Identities=12% Similarity=0.102 Sum_probs=268.3
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
..++...++...+.....|.+|.+..+ +++.+..+.|+..+...+...+.+++.|+++||+|||+++..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVD-------QLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 567788999999999999999988654 5677889999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh---
Q 016048 88 SIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--- 164 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--- 164 (396)
.+++.+.+.++++ ++.+++.|+++|+ +.+...+...+++.|++|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGL-GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999888 8999999999999 87888888999999999999999999999999999999999998876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHH
Q 016048 165 STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQA 244 (396)
Q Consensus 165 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (396)
+||+.|++.++..++..++..+.+||.+++++ + ++.++++++. + ++|.++..
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------~---~~~~~~~~~~---~-~~~~~~~~ 213 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV---------------------R---TPVREGMTRV---L-RDKRFVTY 213 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCccccccc---------------------c---hhhHHHHHHH---H-cCchHHHH
Confidence 89999998888777666555556665321100 0 0000112222 2 45555544
Q ss_pred HHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 016048 245 AIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS 324 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 324 (396)
.+..+...........++|.|.++.. .++.+.+...+..++..........++..||++.++.+..+..+.+++..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~ 292 (400)
T PRK11646 214 VLTLTGYYMLAVQVMLMLPIMVNDIA-GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG 292 (400)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 44433333333334567889888764 46778888888877777766645554444556666666777777777777776
Q ss_pred HhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 325 VAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 325 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..++.+.... ..+++.+.+...|...++..|..|+++||+++|+.+....+|..++|.+.|.+.|+.+
T Consensus 293 ~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 293 MVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 6655543333 3455667777788889999999999999999999999999999999999999999853
No 26
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=259.30 Aligned_cols=345 Identities=14% Similarity=0.084 Sum_probs=262.1
Q ss_pred CCc-cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCch
Q 016048 1 MEK-KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKA 79 (396)
Q Consensus 1 m~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~ 79 (396)
|++ +++++.++...++..++.+...|.+|.+.+ +++.|..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~--------~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA--------QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 443 567888899999999999999999999944 45677889999999999999999999999999999999
Q ss_pred hhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 80 LLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
++..+.++.+++..+++++++ ++.++++|+++|+ +.+...+...+.+.|..++++|+++++......++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGI-GCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 9999999999999 888888888888889999999999999999999999999999
Q ss_pred HHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhc
Q 016048 160 SARFIST---SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLK 236 (396)
Q Consensus 160 ~~~~~~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
+++.+.. +...+........... . .+.+.++++++ +++..+.++.+
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-------------------------~~~~~~~~~~~---- 197 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAILP-L-LFTRILNQQAE-------------------------NHDSTSIWPML---- 197 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHHHH-H-HHhcccCCCCC-------------------------CCCCCCHHHHH----
Confidence 9987632 2222222222222111 1 22222111111 00011222222
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
++|.++......+.....+.....++|.|.++. |.++.+.+...+...+..++++ +..+++.||+++|+.+..+....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~~~~~ 275 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQVFVV 275 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHHHHHH
Confidence 344444433333344444555667889998774 9999888999999999999999 66789999999999988887777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 317 CVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 317 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.++...+. ..........+++.+.....|...+.+.|..|+++++.+.+..+...++|..++|.+.|.+.|+.+
T Consensus 276 ~~~~~~~~--~~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g 349 (381)
T PRK03633 276 ILGSIAML--SQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS 349 (381)
T ss_pred HHHHHHHh--hhHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77665443 122222234445555566788899999999998888888888888899999999999999998764
No 27
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=262.53 Aligned_cols=345 Identities=12% Similarity=0.056 Sum_probs=239.6
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
.++.+++.++...+....|.+..+....+.+ ..+..+.+...+..+++..++++++|+++||+|||+++..+.+++++
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~ 105 (432)
T PRK10406 28 SSGNLVEWFDFYVYSFCSLYFAHIFFPSGNT--TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCF 105 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 4567888888888766666554442211111 12222445555666777779999999999999999999999999999
Q ss_pred HHHHHHhccCch-----hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH---
Q 016048 91 PLAILAYSRSRN-----FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR--- 162 (396)
Q Consensus 91 ~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--- 162 (396)
+.++++++++.. .+..++++|+++|+ +.|..++...+++.|++|+++|+++.+..+.+...|..+++.+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 106 GSLVIACLPGYETIGTWAPALLLLARLFQGL-SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HHHHHhhcCCchhHHHHHHHHHHHHHHHHHh-hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998821 12468899999999 999999999999999999999999999988888888777765532
Q ss_pred ---------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhh
Q 016048 163 ---------FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVH 233 (396)
Q Consensus 163 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
..+||+.|++.+++.++.. .....+||+++++++ +.+++.++++.+
T Consensus 185 ~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~~-----------------------~~~~~~~~~~l~- 239 (432)
T PRK10406 185 QTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQETR-----------------------ALKEAGSLKGLW- 239 (432)
T ss_pred HhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHHh-----------------------hhcccccHHHHH-
Confidence 2489999998877766543 334456665432110 001122455543
Q ss_pred hhcCChhHHHHHHHHHH-HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHH
Q 016048 234 LLKSSPTFSQAAIVAFL-SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFG 312 (396)
Q Consensus 234 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 312 (396)
++++.+...+...+ ....++....++|.|+++.+|++..+.+.......+...+++ .+.|+++||++||+.+..+
T Consensus 240 ---~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~Dr~grr~~~~~~ 315 (432)
T PRK10406 240 ---RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQ-PLIGALSDKIGRRTSMLCF 315 (432)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHH
Confidence 45555554444333 355667788899999988889998888888888888888888 5668999999999887766
Q ss_pred HHHHHHHHHHHH--Hh--hhhhHHHHHHHH-HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHH-HHHhhhhhhhh
Q 016048 313 LLFGCVHMFLYS--VA--WSSWVPYAAAVF-SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSF-ANLVSPLAFSP 386 (396)
Q Consensus 313 ~~~~~i~~~~~~--~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~ 386 (396)
..+..+....+. .. .+.........+ ....+...+....+.+|.+|+++|+++.|+.+...+. .+...|.+.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~ 395 (432)
T PRK10406 316 GSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS 395 (432)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH
Confidence 554433322121 11 112211111221 2233334456778899999999999999999988764 35557777774
Q ss_pred h
Q 016048 387 L 387 (396)
Q Consensus 387 l 387 (396)
+
T Consensus 396 l 396 (432)
T PRK10406 396 L 396 (432)
T ss_pred H
Confidence 4
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.6e-34 Score=265.51 Aligned_cols=357 Identities=15% Similarity=0.165 Sum_probs=258.8
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.+...++..+.+.++.....+.+|.+ +++++.+..+.+++.+++.++..+++++.|+++||+|||+++..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i--------~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~ 90 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLI--------KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSI 90 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34556677777788888888888877 4456778889999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.++++++++ ++.++++|+++|+ +.+...+....++.|++|+|+|++++++...+.++|.++++.+...+
T Consensus 91 ~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 91 VAYSVGTGLSGLASG---VIMLTLSRFIVGM-GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 999999999999998 9999999999999 88888999999999999999999999999999999999998877653
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhH
Q 016048 165 ---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTF 241 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (396)
+||+.|++.....++ .+......||+++.++++. ++ ++ + +++...+..+.++++. + +++.+
T Consensus 167 ~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~~~~~-------~~-~~-~--~~~~~~~~~~~~~~~~---~-~~~~~ 230 (426)
T PRK12307 167 EAYGWRAAFFVGLLPVLL-VIYIRARAPESKEWEEAKL-------SG-KG-K--HSQSAWSVFSLSMKGL---F-NRAQF 230 (426)
T ss_pred ccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHHHhhh-------hc-cc-c--ccccchhhhhHHHHHH---H-hhchH
Confidence 899999875443322 2222223344432111000 00 00 0 0000000001122232 2 44554
Q ss_pred HHHHHHH---HHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 242 SQAAIVA---FLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
+...... +...........++|.|+++. |+++.+.+...+...++.++++ ++.+++.||++||+.+..+.++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 231 PLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4333222 222223334567889988874 9999888988899999999999 7778999999999998888877666
Q ss_pred HHHHHHHhhhh-hHHHHHHHHHHh--hhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 319 HMFLYSVAWSS-WVPYAAAVFSIL--SVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 319 ~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..+.+...... .......+++.+ .....+....++.|.+|+++||++.|+.+...++++.++|.+.|++.++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 309 FIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 65544433222 222222233322 223345666788999999999999999999999999999999999998753
No 29
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=4.5e-33 Score=255.14 Aligned_cols=341 Identities=14% Similarity=0.117 Sum_probs=259.7
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH-HHHHhH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV-PITLSI 89 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~-~~~~~~ 89 (396)
.+..++..++.++..|.+|.+..+ +++.+..+.|++.+++.+...+.+++.|+++||+||||.++. +.....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSE-------EVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHc-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 456788889999999999998544 567788899999999999999999999999999999987655 566666
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhH--HHHHHHhhhhhhHHHHHHHHHh---
Q 016048 90 IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASV--FGIFSGIVSGAFVCGTISARFI--- 164 (396)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~~--- 164 (396)
++.++++++++ ++.+++.|++.|. ..+...|...++..|+.|+++|++. .+......++|.++||.+++.+
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77788889888 8889999999987 7777888888999999888777754 5777778888999998888755
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHH
Q 016048 165 -STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQ 243 (396)
Q Consensus 165 -~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (396)
+||+.|++.++..++..+..++.+||+|+++++++ ++.+.++ ..++|.++.
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~----~~~~~~~~~ 203 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL------------------------TRLEVRG----LLASRDTRL 203 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc------------------------Ccchhhh----hhcCcchHH
Confidence 79999999988887777777677888654322100 0001111 113455554
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
.....++..........+.|.|+++.+|.++.+.+...........++. +..+++.||+++|+.+..+.....+....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~ 282 (375)
T TIGR00899 204 LFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAFYTGL 282 (375)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 4444444444444556678889888889999998888877777777777 677899999999998887777666655555
Q ss_pred HHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 324 SVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
...++.+.... ..+.+++.+...+....+..|..|+ ++++++++.+...++|..++|.+.|.+.|..+
T Consensus 283 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 283 AADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55444443333 3444666777778888889998875 56799999999999999999999999988753
No 30
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=259.94 Aligned_cols=345 Identities=15% Similarity=0.082 Sum_probs=267.5
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
..+..++..++.........+.+|.+ .++++.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i--------~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPI--------AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455667777777777788888887 4456788889999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH--
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF-- 163 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-- 163 (396)
++.+++.++++++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++++..+...++|..++|.+.+.
T Consensus 80 ~~~~i~~~l~~~~~~---~~~~~~~~~l~G~-~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 80 ALMILAVAGLMFSHS---LALFSIAMFVLGV-VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHHHHcch---HHHHHHHHHHHHH-hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 8999999999999 8888888889999999999999999999888888888888877654
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh
Q 016048 164 ---ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT 240 (396)
Q Consensus 164 ---~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
.+||+.|.+.+++.++..++.+ . ++.|+.+++++ +++ + ...++. .++.
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~~~~~~------------------~~~-~---~~~~~~-----~~~~ 206 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFILTL-F-SEFPALGKHAP------------------KAD-K---PVAKEK-----WGIG 206 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHH-h-cCCccccccCc------------------ccc-C---cccccc-----CChH
Confidence 3799999988887766554432 2 22222111000 000 0 000110 1345
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
++...+..++....++....++|.|+++.+|+|+.+.+.+.+...++..++. ++.+++.||+++|+.+.....+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~~~~~~~~~ 285 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVLAGLALVLM 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence 5555666666666677788999999998889999999999999999999999 777899999999998887777766666
Q ss_pred HHHHHhhhhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 321 FLYSVAWSSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 321 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.++...++.+.. ...+..+++.+..++...+...|..| +++++..+......++|..++|.+.|++.|..+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~ 358 (394)
T PRK03699 286 YLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGL 358 (394)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCc
Confidence 665554444332 23455566667777887888888776 5567888999999999999999999999997543
No 31
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=6.4e-34 Score=262.72 Aligned_cols=363 Identities=16% Similarity=0.146 Sum_probs=261.5
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
+...+...+......+..|.+ .++++.+..+.|++.+.+.++..+++++.|+++||+|||+.+..+.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 23 FLIMLMDGYDLAAMGFAAPAI--------SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHhhHHHH--------hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 334445555556666677776 345677788999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hh
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----ST 166 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~ 166 (396)
+.++..++++ ++.+++.|++.|+ +.+...+...+++.|++|+++|++++++......+|..+++.+++.+ +|
T Consensus 95 ~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 95 FTLLCALATN---VTQLLILRFLAGL-GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHccc---hHHHHHHHHHHhc-ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999988 8999999999999 88999999999999999999999999999999999999999888765 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc--cccccchhhhhhh--hhhhhhhhhhhccCCChhHHhhhhcCCh---
Q 016048 167 SAAFQAATAGSIISAVYMRIFLPESVRDEDLY--TPILSSKAEISAS--CEESTKKLQVFKRLPSIDDMVHLLKSSP--- 239 (396)
Q Consensus 167 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 239 (396)
|+.|++.+++..+..++....+||+++...++ +..++..++..++ ++.+++..+++++....++..+.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 99999887777766666667788876432111 0000000000000 0000000000111112233333222222
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
.........++..........+.|. +.+.+|+++.+.+.......++.+++. ++.+++.||+++|+............
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPK-LMVELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 2333334444555556666777784 445569999999999999999999999 77789999999985544444333333
Q ss_pred HHHHHHhhhhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 320 MFLYSVAWSSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 320 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
..+.....+.+.. ...++.+++.+...+...++..|.+|+++|+++.|+.+....+|..++|.+.|.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 329 VLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3333323333333 3355667888888899999999999999999999999999999999999999976
No 32
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=5.6e-33 Score=255.79 Aligned_cols=342 Identities=18% Similarity=0.165 Sum_probs=250.9
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.++.+.+..++..++.++..|.+|.++.+ |++.+..+.|++.+++.++..+++++.|+++||+||||+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-------~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHH-------DLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG 87 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHH-------hcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH
Confidence 456667788889999999999999987654 4677888999999999999999999999999999999999998
Q ss_pred HHHhHHHHHHH---HhccC--chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 85 ITLSIIPLAIL---AYSRS--RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 85 ~~~~~~~~~~~---~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
.+...++.+.. .+.+. ..+++.++++|+++|+ +.+...+...+++.|+.|+|+|++++++.+.+.+.|..+||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~ 166 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGF-GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAP 166 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHH
Confidence 88877665433 22211 1127889999999999 888888888999999999999999999999999999999999
Q ss_pred HHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 160 SARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 160 ~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
+++.+ +||+.+.+..+..++..... ...||.+++++ ++.+.++..+.+
T Consensus 167 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------------~~~~~~~~~~~~ 218 (392)
T PRK12382 167 LGLLLHSHFGFAALALTTMVLPLLAWAFN-GTVRKVPAHAG---------------------------ERPSLWSVVGLI 218 (392)
T ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHHH-HhccCCCCCcc---------------------------cCchHHHHHHHH
Confidence 88764 78776665544433322211 22222211100 001122222111
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHH
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLF 315 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 315 (396)
++ +. +...+..........+.+.|+++. +++. .+......+++.++++ +..+++.||+++|+.+..+..+
T Consensus 219 ~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~ 288 (392)
T PRK12382 219 WK-PG-----LGLALQGVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGGVKVAIVSLLV 288 (392)
T ss_pred HH-hH-----HHHHHHHHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCCCeehHHHHHH
Confidence 11 11 112222334445566778887664 6653 4566666777778888 6778999999999999888888
Q ss_pred HHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 316 GCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 316 ~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..++.+++...++.+.... ..+.+++.+...+...+...|..|+++||++.|+.+....+|..++|.+.|.+.|+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 366 (392)
T PRK12382 289 ETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG 366 (392)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8888777766555443333 4455677777788888888999999999999999999999999999999999998754
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=4.3e-33 Score=257.27 Aligned_cols=344 Identities=13% Similarity=0.128 Sum_probs=258.4
Q ss_pred CccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhh
Q 016048 2 EKKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALL 81 (396)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~ 81 (396)
|.++++..+.+..++..++.++..|.+|.+..+ +++.|..+.|++.+++.++..+++++.|+++||+||||++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~-------~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHD-------QLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 456778889999999999999999999987654 4567788999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHhc---cCc--hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHH
Q 016048 82 TVPITLSIIPLAILAYS---RSR--NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~---~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 156 (396)
..+.++.+++.+.+.++ ++. .+++.+++.|+++|+ +.+...+...+++.|+.|+|+|++++++.+....+|.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGI-GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHh-hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 99999888877665543 221 126788999999999 888888999999999999999999999999999999999
Q ss_pred HHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHh
Q 016048 157 GTISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV 232 (396)
Q Consensus 157 g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
|+.+++.+ +||..+++..+..++..+.. ...||++++++ ++.++++.+
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------------~~~~~~~~~ 215 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVPPVKG---------------------------ERLPFRRVL 215 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCc---------------------------cchhHHHHH
Confidence 88888764 78888877666544332221 11222111000 001122221
Q ss_pred hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHH
Q 016048 233 HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFG 312 (396)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 312 (396)
+ +.+.......+....+.....+.+.|+.+. |++ +.+.......++.+++. +..+++.||+++|+.+..+
T Consensus 216 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~ 285 (399)
T PRK05122 216 G------RVWPYGMGLALASIGFGTIATFITLYYAAR-GWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRVAIVS 285 (399)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 1 111112222233344455567778887654 653 44666677888888888 6678999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 313 LLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 313 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..+..++...+...++.+.... ..+.+++.+..++.......|..|+++||++.|+.+....+|..++|.+.|.+.|+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 365 (399)
T PRK05122 286 LLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF 365 (399)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888777766655444333 455677777778888888889999999999999999999999999999999998864
No 34
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=6.1e-33 Score=256.70 Aligned_cols=344 Identities=13% Similarity=0.096 Sum_probs=266.0
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
.+..++..++.++..|.+|.+ .++++.+..+.++..+.+.+++.+++++.|+++||+||||++..+..+.++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 19 VLFEFATYIANDMIQPGMLAV--------VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHhhhhhHhcchHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 444555566788888999887 345667778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hh
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----ST 166 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~ 166 (396)
+.+.+.++++ ++.+++.|+++|+ +.+...+...+.+.|.+|+++|.+.+++......+|..+||.+++.+ +|
T Consensus 91 ~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 91 TCLAILLAQS---IEQFTLLRFLQGI-GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHcc---HHHHHHHHHHHHh-HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9999999998 8999999999999 88888888999999999999999999998888888888898887664 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHH
Q 016048 167 SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAI 246 (396)
Q Consensus 167 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
|+.|++.+++.++..+..++..||++++++++. +. .+..+..+.+.++|.++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~~~~~~~~~~~~~~~~~ 222 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEKL-----------------SL-------KELGRDYKLVLKNRRFVAGAL 222 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCccccccc-----------------cH-------HHHHHHHHHHHcCcHHHHHHH
Confidence 999999888887776666666777643322000 00 001111222335677776666
Q ss_pred HHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHh
Q 016048 247 VAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVA 326 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 326 (396)
...+..........+.|.|+.+.+|+++.+.+........+..++. ++.+++.||+++|+.+..+..+..++..++...
T Consensus 223 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~ 301 (406)
T PRK15402 223 ALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655555555566677888888889999888888777777888888 677899999999999888888777777766553
Q ss_pred h-----hhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 327 W-----SSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 327 ~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
. +.+.. ....+.+++.+...+......... +++++|++.+..+..+.++..+++.+.+.+++...
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 302 TVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 2 12222 224455667766666666655443 45899999999999999999999999999987654
No 35
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.1e-33 Score=263.71 Aligned_cols=372 Identities=13% Similarity=0.092 Sum_probs=284.2
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.++.++...++..++.....+.+|.+.+ +++.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQ--------SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHH--------HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 5667788888888888899999999843 45777788999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++.+......++|..+||.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~---~~~l~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 83 VLFTLGSLFCALSGT---LNELLLARVLQGV-GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHhCC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999999999888 8999999999999 88999999999999999999999999999999999999999988765
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccc------------hhhhhh-hhhh--h-----------
Q 016048 165 ---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSS------------KAEISA-SCEE--S----------- 215 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~------------~~~~~~-~~~~--~----------- 215 (396)
+||+.|++......+..+......|+.+.++++.+..... .++.+. .... .
T Consensus 159 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (471)
T PRK10504 159 EYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVAL 238 (471)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHH
Confidence 8999999988877776666656666554332221110000 000000 0000 0
Q ss_pred -hhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHH
Q 016048 216 -TKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLI 294 (396)
Q Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
....++++.+++..+ .+ ++++|.+.......++..........+.|+|.++..|.++.+.+.......+...++. .
T Consensus 239 ~~~~~~~~~~~~~~~~-~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~ 315 (471)
T PRK10504 239 LLYLLHARNNNRALFS-LK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMK-R 315 (471)
T ss_pred HHHHHHHhcCCCCccC-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-H
Confidence 000001111111111 11 3367778777777777777766667788899888789999999999888888888887 6
Q ss_pred HHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh--h-hhHHH-HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHH
Q 016048 295 MMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW--S-SWVPY-AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCIS 370 (396)
Q Consensus 295 ~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 370 (396)
+.+++.||+|+|+++..+..+..+...++.... . .+... ...+.+++.+...+.......+.+|+++++.++|+.+
T Consensus 316 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 316 IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHH
Confidence 678999999999999888887777766655532 1 11112 2344467777788888899999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhccc
Q 016048 371 GICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 371 ~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
+...+|..+++.+.|.+++...
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988764
No 36
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=257.84 Aligned_cols=352 Identities=15% Similarity=0.144 Sum_probs=275.0
Q ss_pred CccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhh
Q 016048 2 EKKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALL 81 (396)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~ 81 (396)
+.||.++.+.+..++...+.+...|.+|.++.+ +++.+..+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-------~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~ 76 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSR-------QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM 76 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH
Confidence 356678888889999999999999999998755 4678888999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH
Q 016048 82 TVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA 161 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 161 (396)
+.+.++.+++.++.+++++ ++.++++|.+.|. +.+...+...++..|..|+++|++++++.....++|..+||.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~ 152 (395)
T PRK10054 77 LLAITAFASGFIAIPLVNN---VTLVVLFFALINC-AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLG 152 (395)
T ss_pred HHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 8888889999887 76777888999999999999999999999999999999999999
Q ss_pred HHh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 162 RFI---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 162 ~~~---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
+.+ +|+..|++.+++.++..+...+.+||++++++++ +++. .+.++ ..++
T Consensus 153 ~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------------------~~~~----~~~~~----~~~~ 205 (395)
T PRK10054 153 TLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-------------------TGSV----WSPSV----LLQD 205 (395)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-------------------hhhh----hhhhh----hccC
Confidence 876 7999999888877776665556666654322100 0000 00112 2356
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh--ccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAK--FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
|.++......++..........+.+.|..+. .+.+....+.......+.....+ ...+++.||.++|+.+..+..+.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhHHHHHHHHH
Confidence 7776666666666555555555666666432 35566667777777777777777 55578999999999988888888
Q ss_pred HHHHHHHHHh-hhhhHHH-HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 317 CVHMFLYSVA-WSSWVPY-AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 317 ~i~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.++...+... .+.+... ...+++++.....|...+.+.+..|++.++++.+..+ ...+|..+||.++|.++|+.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~ 362 (395)
T PRK10054 285 VIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPP 362 (395)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcCh
Confidence 8877666553 2333222 3555677777777888899999999999999998765 6779999999999999998754
No 37
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.6e-33 Score=264.56 Aligned_cols=375 Identities=14% Similarity=0.114 Sum_probs=256.6
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
...++.+.+.++.+......|.+-.+.. ..+...+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~ 96 (502)
T TIGR00887 20 IAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIM 96 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 4566778888888888888887644321 1234566778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCch---hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 89 IIPLAILAYSRSRN---FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 89 ~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
.++.++++++++.. .++.++++|+++|+ +.+...+....+++|++|+++|++++++.+....+|.++++.++..+
T Consensus 97 ~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~-~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 97 IIATVASGLSPGSSPKSVMATLCFWRFWLGV-GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHHccCcccchHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888876421 15789999999999 99999999999999999999999999999999999998888776421
Q ss_pred --------------------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC---cccc-c-c---cccchhhh-h
Q 016048 165 --------------------------STSAAFQAATAGSIISAVYMRIFLPESVRD---EDLY-T-P---ILSSKAEI-S 209 (396)
Q Consensus 165 --------------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~---~~~~-~-~---l~~~~~~~-~ 209 (396)
+||+.|.+.++.+++..+ ..+++||+|+. ++++ + . +.+..+++ .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~ 254 (502)
T TIGR00887 176 AGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIE 254 (502)
T ss_pred HHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccc
Confidence 599999877776665444 45789999873 1111 1 1 11111100 0
Q ss_pred hhhhhhhh-hhhhhccCCChhHHhhhhcCChhHHHH---HHHHHHHHHhhhhhhhhHHHHhhhhccccccchhh------
Q 016048 210 ASCEESTK-KLQVFKRLPSIDDMVHLLKSSPTFSQA---AIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFAD------ 279 (396)
Q Consensus 210 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------ 279 (396)
++.++.++ ++++++.+.++++.++...+++..+.. ....+...+.+++...+.|.++++ .|+++.+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~ 333 (502)
T TIGR00887 255 AEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEEL 333 (502)
T ss_pred cCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHH
Confidence 00000000 000111112456655322222222222 222333444566777778888865 4877653221
Q ss_pred ------HHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhh---hHHHH-HHHHH-Hhhhhhhhh
Q 016048 280 ------LMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSS---WVPYA-AAVFS-ILSVFSHPC 348 (396)
Q Consensus 280 ------~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~ 348 (396)
......++.+++. ++.+++.||+|||+++..+..+..+++.++...... ..... ..+.. .+.....+.
T Consensus 334 ~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (502)
T TIGR00887 334 YKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNAT 412 (502)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCch
Confidence 1223344555566 667899999999999888887777776666543211 11111 11111 222334567
Q ss_pred hhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 349 LRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 349 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.+.+.+|.+|++.|+++.|+.+..++++++++|.+.+.+.|.
T Consensus 413 ~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 413 TFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred hhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 788889999999999999999999999999999999999884
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=4.8e-33 Score=263.20 Aligned_cols=371 Identities=15% Similarity=0.123 Sum_probs=254.4
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
...++.+.+.++...+.+..|.+.++...+...+.+.+..+.+++.+++.++.+++++++|+++||+|||++++.+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~ 95 (479)
T PRK10077 16 VATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLF 95 (479)
T ss_pred HHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34566777888888888888887665544445567888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc---------cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 89 IIPLAILAYS---------RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 89 ~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
.++.+.+++. ++.+.++.++++|+++|+ +.+...+...++++|++|+++|++++++.+.+..+|.++++.
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~ 174 (479)
T PRK10077 96 FISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGI-GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYF 174 (479)
T ss_pred HHHHHHHHhhccccccccccchhHHHHHHHHHHHHhh-hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9988887763 232335778899999999 999999999999999999999999999999999999998887
Q ss_pred HHHH------------hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc---ccc----cccchhhhhhhhhhhhhhhh
Q 016048 160 SARF------------ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDL---YTP----ILSSKAEISASCEESTKKLQ 220 (396)
Q Consensus 160 ~~~~------------~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~----l~~~~~~~~~~~~~~~~~~~ 220 (396)
++.. .+||+.|++.++..++..+ ..+++||+|++..+ ++. .++.....+.++..++.++.
T Consensus 175 ~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
T PRK10077 175 VNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHS 253 (479)
T ss_pred HHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHH
Confidence 7643 3799999988877777654 45778998753211 100 00000000000000000000
Q ss_pred hhccCCChhHHhhhhcCChhHHHHHHH----HHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q 016048 221 VFKRLPSIDDMVHLLKSSPTFSQAAIV----AFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMM 296 (396)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (396)
.+++....+..+ . ......... .+...........+.|.+..+ .|.+...........++...++. ++.
T Consensus 254 ~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~-~~~ 326 (479)
T PRK10077 254 LDHGRKTGGKLL----M-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFT-VLA 326 (479)
T ss_pred HHHhhhhhhhhc----c-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHH-HHH
Confidence 000000000000 0 000011111 111111122233344555544 58887777777777888888888 777
Q ss_pred HhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh---hhHH--HHHHHHHHhhhh-hhhhhhHHHhhccCCccchhHhhhHH
Q 016048 297 PVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS---SWVP--YAAAVFSILSVF-SHPCLRTIVSKQVASNEQGKAQGCIS 370 (396)
Q Consensus 297 ~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~---~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~ 370 (396)
+++.||+|||+.+..+..+.+++.+.+..... .... ....+++.+.+. ..|..+.+++|.+|+++|+++.|+.+
T Consensus 327 g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~ 406 (479)
T PRK10077 327 IMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAV 406 (479)
T ss_pred HHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHH
Confidence 89999999999999999988888777654321 1111 122233333333 34778899999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhh
Q 016048 371 GICSFANLVSPLAFSPLT 388 (396)
Q Consensus 371 ~~~~~g~~~~~~~~g~l~ 388 (396)
..++++.++++.+.+.+.
T Consensus 407 ~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 407 AAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHHHhHHHH
Confidence 999999999987776554
No 39
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=6.9e-33 Score=254.33 Aligned_cols=348 Identities=13% Similarity=0.113 Sum_probs=255.2
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
++++.++.+.++..++..+.....+....+ ++.+..+.+++.+.+.+++.+.+++.|+++||+||||+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE--------LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 456788899999999877776666666433 345567889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.++.+++.+.+.++++ . ++.|+++|+ +.+...|...+++.|++|+|+|++++++.+....+|.++||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~-~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGI-GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888877665 3 678999999 99999999999999999999999999999999999999999999887
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhH
Q 016048 165 ---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTF 241 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (396)
.|+..+.+.+...++. .+..+.+||+++++++++ .+.. .. .+ +.++..+.++++|.+
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~-------~~~~--~~---~~-------~~~~~~~~l~~~~~~ 207 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS-------WNPI--AL---LR-------DFFHACRVLWRDKLG 207 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC-------CCHH--HH---HH-------HHHHHHHHHHhCchh
Confidence 3444555444443333 334467787654322100 0000 00 00 001111223355665
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
+.......+...........+|.|+++.+|.++.+.|......+++.+++. +..+++.||.++++.+..+.. .++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~-~~~~~~ 285 (393)
T PRK11195 208 RFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGIL-MGLVVL 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHH-HHHHHH
Confidence 554444444444445556667888888889999999999999999999999 677899999888887777753 334444
Q ss_pred HHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCcc-chhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 322 LYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNE-QGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
.+...++.+.... ..+.+++.+...+...+..++..|++. +|++.++.+..++++..++..+.+.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 286 LMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred HHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4444444433333 445677777777778888888766554 7999999999999999999999986643
No 40
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.5e-32 Score=256.97 Aligned_cols=340 Identities=12% Similarity=0.063 Sum_probs=240.6
Q ss_pred hhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccC-chhHHHHHHHHHHHhhhccchh
Q 016048 44 SLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRS-RNFFYAYYVLRTLTAMVCEGSI 122 (396)
Q Consensus 44 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~ 122 (396)
+.+..+.|+..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++++++. ..+++.+++.|++.|+ +.+..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi-~~g~~ 137 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW-FQGMG 137 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHH-HHhcc
Confidence 777889999999999999999999999999999999999999999999988887641 1117888999999999 88888
Q ss_pred hHHHHHHHhcCCCcccchhHHHHHHHhhhhhh-HHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 016048 123 HCLSLAYVADNVPPGRRASVFGIFSGIVSGAF-VCGTISARF----ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDL 197 (396)
Q Consensus 123 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 197 (396)
.+.....+.|++|+|+|++++++.+.+.++|. ..+|+++.. .+||+.|++.+++.++..++..+++||+|++...
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL 217 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC
Confidence 88888889999999999999999999988886 445554322 2899999999888887777777888887654211
Q ss_pred ccccccchhhhhhhhhhhhhhhhhhccCCChhHHh-hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc
Q 016048 198 YTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV-HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQ 276 (396)
Q Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 276 (396)
.+ .++. +++.++ +.+++++++.+.++.+ +.+.+++.++...+..++.....++...++|.|+++..|++..+
T Consensus 218 ~~----~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~ 290 (452)
T PRK11273 218 PP----IEEY-KNDYPD--DYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK 290 (452)
T ss_pred CC----hhhh-hhcccc--ccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 00 0000 000000 0000011112233322 23456788888888877777777788889999999988999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhh--cchhHH-HHHHHHHHHHHHHHHHhh--hhhHHHH-HHHHHHhhhhhhhhhh
Q 016048 277 FADLMVIAGIAGTISQLIMMPVLAPTV--GEARLL-SFGLLFGCVHMFLYSVAW--SSWVPYA-AAVFSILSVFSHPCLR 350 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~-~~~~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~ 350 (396)
.+.......++.+++. ++.|+++||+ +||... .....+..++.+.+.... +.+.... ...++.......+...
T Consensus 291 ~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 369 (452)
T PRK11273 291 SSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIG 369 (452)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHH
Confidence 8888888888898888 7789999998 444332 222223333333322221 1221211 2222332222223344
Q ss_pred HHHhhccCCccchhHhhhHHHHHHHHHHh-hhhhhhhhhhccc
Q 016048 351 TIVSKQVASNEQGKAQGCISGICSFANLV-SPLAFSPLTGDCR 392 (396)
Q Consensus 351 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~ 392 (396)
.+..|.+|+++||+++|+.+...++|+.+ +|.+.|.+.|+.+
T Consensus 370 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 370 LHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 56789999999999999999999988765 7999999998754
No 41
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.1e-32 Score=256.72 Aligned_cols=355 Identities=13% Similarity=0.068 Sum_probs=240.5
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHH-HHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSG-FQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
+....++++.+++.++...+.+..|.+.+|. +.++.+.+ ....+ .......+...+++++.|+++||+|||++++.
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~-~~~~~~~~--~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFGFYATAIAKTF-FPAGNEFA--SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCchH--HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 3455578899999999999999999886653 22222211 00000 11222234446788999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhHH--------HHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhH
Q 016048 84 PITLSIIPLAILAYSRSRNFFY--------AYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFV 155 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 155 (396)
+..+..++.++++++++ ++ .++++|+++|+ +.+...+....+++|++|+++|++++++.+...++|..
T Consensus 92 ~~~~~~~~~~l~~~~~~---~~~~~~~~~~~l~~~R~l~G~-~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 92 TLSIMASGTLLIAFVPG---YATIGLAAPLLVLLGRLLQGF-SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhhc-cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999998 55 46899999999 88888888899999999999999999999888877777
Q ss_pred HHHHHHHH------------hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhc
Q 016048 156 CGTISARF------------ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFK 223 (396)
Q Consensus 156 ~g~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (396)
+++.++.. .+||+.|++...... .........||+++..+ ++ +
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~-~~~~~~~~~~e~~~~~~--------------------~~-~--- 222 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVP-FIFLIRRSLEETEEFLA--------------------RK-H--- 222 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHH-HHHHHHHhcCCCHHHHH--------------------hh-h---
Confidence 76666553 389999987544321 11111122222210000 00 0
Q ss_pred cCCChhHHhhhhcCChhHHHH-HHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 224 RLPSIDDMVHLLKSSPTFSQA-AIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT 302 (396)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (396)
+.+.++.++..++++..+.. ....++....++....+.|.|+++.+|++..+.+.......++.+++. ++.|++.||
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~Dr 300 (434)
T PRK15075 223 -RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-PIGGALSDR 300 (434)
T ss_pred -ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 00111222222233333322 333334455566778889999998889999888888888888899988 777899999
Q ss_pred hcchhHHHHHHHHHHHHHH-HHHH-hhhh--hHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HH
Q 016048 303 VGEARLLSFGLLFGCVHMF-LYSV-AWSS--WVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FA 376 (396)
Q Consensus 303 ~g~~~~~~~~~~~~~i~~~-~~~~-~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g 376 (396)
++||+....+..+..+... .+.. .... ..... ..+.+++.+...+....+..|.+|+++|+++.|+.+.+.. ++
T Consensus 301 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~ 380 (434)
T PRK15075 301 IGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIF 380 (434)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHH
Confidence 9999987766544432221 1111 1111 11112 2333555666667777889999999999999999766555 46
Q ss_pred HHhhhhhhhhhhhcccC
Q 016048 377 NLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 377 ~~~~~~~~g~l~~~~~~ 393 (396)
+.++|.+.|.+.|+.+.
T Consensus 381 g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 381 GGFTPAISTWLIHVTGD 397 (434)
T ss_pred hhhHHHHHHHHHHhcCC
Confidence 88899999999998653
No 42
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.3e-32 Score=253.32 Aligned_cols=354 Identities=15% Similarity=0.197 Sum_probs=265.4
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+....+++..++..++.+...|.+|.+.++. + .++.+....+.|++.+++.++..+++++.|+++||+|||+.+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 90 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL-G--VTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh-C--CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHH
Confidence 4566678888999999999999999997652 1 111112223569999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.++.+++.+++.++++ ++.+++.|++.|+ +.+ ..+....++.|+.|+++|+++++.......+|..++|.+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 91 ALGMGIVMVLMGLAQN---IWQFLILRALLGL-LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888 8999999999998 654 5677888999999999999999999999999999999888764
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT 240 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
+||+.|++.+++.++..+..++.+||+++++++++ +.+.++..+.+++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~ 220 (408)
T PRK09874 166 ADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-------------------------MLHMREVVTSLKNPKL 220 (408)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-------------------------hhHHHHHHHhCcCCch
Confidence 89999999988887777766677777543222000 0011222333333333
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccc---chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKN---QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
....................+++.|..+..+.... ..+.+....++...++. +..+++.||++||+.+..+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~ 299 (408)
T PRK09874 221 VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILITALIFSV 299 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHHHHHHHHH
Confidence 33233333333444445566778887765332221 23455556677777777 666899999999999988888877
Q ss_pred HHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 318 VHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 318 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
++.+......+.+.... .++.+++.+...|...+...+..|++++|+.+++.+....+|..++|.+.|.+.+...
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 300 LLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 77766665555544433 4556777888888888999999999999999999999999999999999999988653
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.3e-32 Score=253.66 Aligned_cols=346 Identities=12% Similarity=0.087 Sum_probs=261.0
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
..+.+..++..+......+.+|.+ +++++.+..+.|+..+.+.+++.+++++.|+++||+|||+++..+..+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i--------~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF--------QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 445666677777778888888887 446788889999999999999999999999999999999999999999
Q ss_pred hHHHHHHH---HhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH-
Q 016048 88 SIIPLAIL---AYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF- 163 (396)
Q Consensus 88 ~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~- 163 (396)
.+++.+++ .++++ ++.++++|+++|+ +.+...+..+.++.|+.|+++|.+.++..+..+.+|..+||.++..
T Consensus 101 ~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~-g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 101 YALGAALFWPAAEIMN---YTLFLVGLFIIAA-GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHhcCC---HHHHHHHHHHHHH-HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 45778 9999999999999 9999999999999998887777778999999999999998877642
Q ss_pred -----------------------------hhhHHHHHHHHHH-HHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhh
Q 016048 164 -----------------------------ISTSAAFQAATAG-SIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCE 213 (396)
Q Consensus 164 -----------------------------~~~~~~f~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~ 213 (396)
.+||++|+....+ .++..+......||.+++++
T Consensus 177 ~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~----------------- 239 (438)
T PRK10133 177 ILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH----------------- 239 (438)
T ss_pred HhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-----------------
Confidence 1455566543333 33322222233444221110
Q ss_pred hhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHh-hhhccccccchhhHHHHHHHHHHHHH
Q 016048 214 ESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYL-KAKFHFNKNQFADLMVIAGIAGTISQ 292 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~ 292 (396)
++++..+..++.++. + ++|.++...+..++......+...+.+.|+ ++.+|+++.+++..+....++.++++
T Consensus 240 ---~~~~~~~~~~~~~~l---l-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~ 312 (438)
T PRK10133 240 ---SDAKQGSFSASLSRL---A-RIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR 312 (438)
T ss_pred ---ccccccchhhhHHHH---H-hCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 000000000112222 2 567666666666666677777777888885 56679999999999999999999999
Q ss_pred HHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHH
Q 016048 293 LIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGI 372 (396)
Q Consensus 293 ~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 372 (396)
+..+++.||+++|+++..+..+..+.+++....+..+......+.+++.+..+|..++...|..|+ +.+++.++.. .
T Consensus 313 -~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~ 389 (438)
T PRK10133 313 -FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-M 389 (438)
T ss_pred -HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-H
Confidence 778899999999999888877776666655554443333345667899999999999999999874 5788888886 4
Q ss_pred HHHHHHhhhhhhhhhhhccc
Q 016048 373 CSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 373 ~~~g~~~~~~~~g~l~~~~~ 392 (396)
...|+.++|.+.|.+.|..+
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred HhccchHHHHHHHHHHHhcc
Confidence 56789999999999988754
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=9e-32 Score=248.21 Aligned_cols=351 Identities=12% Similarity=0.137 Sum_probs=253.4
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
+|++....++.++...+.+...+.+|.+.+ +++.+..+.|++.+.+.++..+++++.|+++||+||||++..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~ 83 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLK--------ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMI 83 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHH--------HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 466778888999999998888888888853 346777899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH---hc-cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhh-HHHH
Q 016048 84 PITLSIIPLAILA---YS-RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAF-VCGT 158 (396)
Q Consensus 84 ~~~~~~~~~~~~~---~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~ 158 (396)
+.++.+++.+++. .. ++ ++.+++.|++.|+ +.+...+...+++.|+.|+|+|++++|+.+...++|. +++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~-g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~ 159 (402)
T TIGR00897 84 GLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGL-GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHc-chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988876553 22 35 7888899999999 8777777888899999999999999999999999996 5788
Q ss_pred HHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhh
Q 016048 159 ISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHL 234 (396)
Q Consensus 159 ~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (396)
.+++.+ +|+..++.......+..++..+..+|.++++++++ + + +..+.++..+.
T Consensus 160 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~----~------~~~~~~~~~~~ 217 (402)
T TIGR00897 160 YYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQT------------R----E------KFSELGKAATI 217 (402)
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcccccC------------C----c------chhhHHHHHHH
Confidence 887653 65555444433333333334344454322211000 0 0 00011111222
Q ss_pred hcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHH-HHH
Q 016048 235 LKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLS-FGL 313 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~~ 313 (396)
+.++|.++...+..++.....++...+.|.|.++ +|+++.+.+.......++..++. +..+++.||++||+.+. .+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~ 295 (402)
T TIGR00897 218 LFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTVRWFGG 295 (402)
T ss_pred HHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHHHHHHH
Confidence 3467888877777777777778888899999866 69999998888888999999999 67789999999887653 333
Q ss_pred HHHHHHHHHHHHh-----hhhhHH-HHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 314 LFGCVHMFLYSVA-----WSSWVP-YAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 314 ~~~~i~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
....++...+... .+.+.. ...++.+.+.+...+ ......|. ++++||++.|+.+....+++.++|.+.|.+
T Consensus 296 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 373 (402)
T TIGR00897 296 VGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLF 373 (402)
T ss_pred HHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332232221 122222 223444555554444 34556665 457899999999999999999999999999
Q ss_pred hhccc
Q 016048 388 TGDCR 392 (396)
Q Consensus 388 ~~~~~ 392 (396)
+|..+
T Consensus 374 ~~~~g 378 (402)
T TIGR00897 374 IGFFG 378 (402)
T ss_pred Hhhcc
Confidence 98754
No 45
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3.8e-32 Score=257.08 Aligned_cols=374 Identities=14% Similarity=0.109 Sum_probs=256.1
Q ss_pred HHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHH
Q 016048 14 IFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLA 93 (396)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~ 93 (396)
.+...++.....+.+|....+..-..+.+.+.+..+.|++.+++.++..+++++.|+++||+|||++++.+.++..++.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 116 (481)
T TIGR00879 37 GLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAI 116 (481)
T ss_pred HHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 34455566677777777655521111223346678999999999999999999999999999999999999999999999
Q ss_pred HHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH---HH----hhh
Q 016048 94 ILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA---RF----IST 166 (396)
Q Consensus 94 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~----~~~ 166 (396)
++.+..+...++.++++|+++|+ +.+...+...++++|++|+++|++++++.+....+|..+++.++ .. .+|
T Consensus 117 ~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w 195 (481)
T TIGR00879 117 LMGLAAFALSVEMLIVGRVLLGI-GVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGW 195 (481)
T ss_pred HHHHhccccchHHHHHHHHHHHh-hhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccH
Confidence 98766553336789999999999 88999999999999999999999999999999999999999998 43 389
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCc---ccccc----cccchhhhhhhhh--------hhhhhhhhhccCCChhHH
Q 016048 167 SAAFQAATAGSIISAVYMRIFLPESVRDE---DLYTP----ILSSKAEISASCE--------ESTKKLQVFKRLPSIDDM 231 (396)
Q Consensus 167 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~----l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 231 (396)
|+.|++.++..++.. ...+++||+|+.. ++.+. .++..++.+++.+ ......+.+..+..+++.
T Consensus 196 ~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (481)
T TIGR00879 196 RIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSL 274 (481)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 999999665555443 4457788876421 11110 0000000000000 000000111112224444
Q ss_pred hhhhcC--ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHH
Q 016048 232 VHLLKS--SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLL 309 (396)
Q Consensus 232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 309 (396)
++..++ ++.++...+..+...........+.|.+.+ ..|++..+.+.......+..+++. ++.+++.||++||+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~ 352 (481)
T TIGR00879 275 FSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPLL 352 (481)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHH
Confidence 332221 122222222233333333344555566554 459998888888888899999999 7778999999999999
Q ss_pred HHHHHHHHHHHHHHHHh---hh-------hh-HHHHHHHHHHhhh-hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHH
Q 016048 310 SFGLLFGCVHMFLYSVA---WS-------SW-VPYAAAVFSILSV-FSHPCLRTIVSKQVASNEQGKAQGCISGICSFAN 377 (396)
Q Consensus 310 ~~~~~~~~i~~~~~~~~---~~-------~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 377 (396)
..+..+.+++++++... .. .. ......++..+.+ ...+....+..|.+|+++|+++.|+.+...++|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~ 432 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLAN 432 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHH
Confidence 88888877777766521 11 11 1122223333333 3346677788999999999999999999999999
Q ss_pred Hhhhhhhhhhhhcc
Q 016048 378 LVSPLAFSPLTGDC 391 (396)
Q Consensus 378 ~~~~~~~g~l~~~~ 391 (396)
+++|.+.+.+.++.
T Consensus 433 ~i~~~~~~~~~~~~ 446 (481)
T TIGR00879 433 FIVGFLFPTMLESI 446 (481)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998864
No 46
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=6e-32 Score=248.66 Aligned_cols=348 Identities=11% Similarity=0.070 Sum_probs=268.2
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.+..++...++.++..++..|.+|.+ +++++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~--------~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~ 75 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQF--------QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL 75 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 35566777888888889999999998 5567888899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.++...+...++++.+++.|++.|+ +.+...+....++.+..|+++|++.+++.+...++|..+||.++..+
T Consensus 76 ~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 76 FLYALGAFLFWPAAEIMNYTLFLVGLFILTA-GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHh-hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999886544211128999999999999 99999999999999999999999999999999999999998887644
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhh
Q 016048 165 -----------------------------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEES 215 (396)
Q Consensus 165 -----------------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~ 215 (396)
+||++|++.+++.++..++.. +.++++.++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~------------------ 215 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSD------------------ 215 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCccc------------------
Confidence 499999988887766544432 22222111110
Q ss_pred hhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhc-cccccchhhHHHHHHHHHHHHHHH
Q 016048 216 TKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKF-HFNKNQFADLMVIAGIAGTISQLI 294 (396)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
+ ++.+..++.++ +.++|+++...+..++....+.+..++++.|.++.. +.+....+...........+++ +
T Consensus 216 -~--~~~~~~~~~~~----~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR-~ 287 (410)
T TIGR00885 216 -A--KQISFSASLSR----LARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISR-F 287 (410)
T ss_pred -c--ccccchhhHHH----HHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH-H
Confidence 0 00000112222 225677777777777777777778888999987642 3344444555666667788899 7
Q ss_pred HHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH
Q 016048 295 MMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS 374 (396)
Q Consensus 295 ~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 374 (396)
+++++.||+++|+.+..+.....+..++....++....+...+.+.+.+..+|..++...+..+++.+..+.++... .
T Consensus 288 ~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~ 365 (410)
T TIGR00885 288 IGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--I 365 (410)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--H
Confidence 77899999999999988888888888887776665555557777888999999999999999986665444444443 3
Q ss_pred HHHHhhhhhhhhhhhcc
Q 016048 375 FANLVSPLAFSPLTGDC 391 (396)
Q Consensus 375 ~g~~~~~~~~g~l~~~~ 391 (396)
+|+.+.|.+.|.+.|..
T Consensus 366 ~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 366 IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred hccchHHHHHHHHHHHh
Confidence 99999999999999954
No 47
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.6e-32 Score=257.40 Aligned_cols=332 Identities=18% Similarity=0.182 Sum_probs=243.6
Q ss_pred CCcchhH---HHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhh
Q 016048 40 RDECSLA---IYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAM 116 (396)
Q Consensus 40 ~~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 116 (396)
.+|++++ ..+.++..+++.++.++++++.|+++||+|||++++++.++.+++.++.+++++ ++.+++.|++.|+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~ 192 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGM 192 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHh
Confidence 5677887 889999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 016048 117 VCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-STSAAFQAATAGSIISAVYMRIFLPESVRDE 195 (396)
Q Consensus 117 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 195 (396)
+.+...+...+++.|++|+++|+++.++...+..+|.+++|.++..+ +||+.|++.+++.++..+.. +++||+|+..
T Consensus 193 -~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l 270 (505)
T TIGR00898 193 -GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLS-WFVPESPRWL 270 (505)
T ss_pred -hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhcCCChHHH
Confidence 88998999999999999999999999999999999999999998766 79999999988877766555 7889988632
Q ss_pred cc-------ccccccchhhhhh----hhhhhh--hhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhH
Q 016048 196 DL-------YTPILSSKAEISA----SCEEST--KKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSM 262 (396)
Q Consensus 196 ~~-------~~~l~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (396)
.. ++.+++..+.+.. +..+.. ++.++++++.+.++.+ ++|.++...+......+........+
T Consensus 271 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (505)
T TIGR00898 271 ISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLF----RTPNLRKTTLCLMMLWFTTAFSYYGL 346 (505)
T ss_pred HHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHh----CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111111110000 000000 0000111112344433 56666655554444333322222223
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhh--hHHHH-HHHHH
Q 016048 263 MYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSS--WVPYA-AAVFS 339 (396)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~~~~~ 339 (396)
+.+.. ..+.+. .......++..+++. ++.+++.||+|||+.+..+.++.+++.+++...++. +.... ..+.+
T Consensus 347 ~~~~~-~~~~~~---~~~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 421 (505)
T TIGR00898 347 VLDLG-NLGGNI---YLDLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK 421 (505)
T ss_pred hcccc-ccCCCh---HHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 33332 234432 233445667777777 667899999999999999998888888777765543 22222 33345
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
++....++..+.+..|.+|++.|+++.|+.+....+|++++|.+.+
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 5566777888999999999999999999999999999999999988
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1e-31 Score=246.09 Aligned_cols=346 Identities=13% Similarity=0.010 Sum_probs=266.6
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+....+.+..+..+.+.++..|.+|.+.+ +.+.+..+.|++.+++.+...++++++|+++||+|||+.....
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~p~l~~~l~--------~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 75 (382)
T TIGR00902 4 QPFRWLALGFFGYFCAYGIFLPFFPAWLK--------GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRL 75 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 34456778888889999999999999954 4577889999999999999999999999999999985433222
Q ss_pred HH-HhHHHH-HHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 85 IT-LSIIPL-AILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 85 ~~-~~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
.. ...+.. ..+..+++ ++.+++.|.++|. +.+...|...++..|+ +++|++.++......++|.+++|.+++
T Consensus 76 ~~~~~~l~~~~~~~~~~~---~~~l~~~~~l~~~-~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g 149 (382)
T TIGR00902 76 LALASAIFAAAFSAGAHN---AWLLFIAIGLFAL-FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFG 149 (382)
T ss_pred HHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHH
Confidence 11 111111 23446677 9999999999998 7777788888887765 478899999999999999999999887
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 163 FI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 163 ~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
.+ +||..|++......+ .+.. +.++|+++++++++ +++.++.++.++ .+ |+
T Consensus 150 ~l~~~~g~~~~f~~~~~~~~~-~~~~-~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~---~l-~~ 204 (382)
T TIGR00902 150 GLIGMFDEQNILAILTAGLAF-MLIG-FLIKPTIPPKDAIP-------------------EDESQGDSAFIA---LL-KN 204 (382)
T ss_pred HHHHHcChhHHHHHHHHHHHH-HHHH-HHcCCCCCCCcccc-------------------ccccccchhHHH---HH-cC
Confidence 65 899998887655332 2222 33444322211000 000011112233 23 67
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|+++...+..++.........++.|.|+++ .|.++.+.|.......+..++.. ...+++.||+++|+.+..+.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHHHHHH
Confidence 888888888888888888888999999977 69999999999998888888887 7778999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHH-HHHHHHHhhhhhhhhhhhccc
Q 016048 319 HMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISG-ICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~ 392 (396)
....+...++.+..+. ..+-++..+...+....++++. |++++++++++++. ...+|..++|.++|.++|+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 283 RWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998888777766555 5555888899999999999998 99999999999875 566999999999999999864
No 49
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-32 Score=237.27 Aligned_cols=350 Identities=14% Similarity=0.122 Sum_probs=292.0
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
++++.-.....+....+.+..|+.+.+ ++++++|..|.+++.++..+...+.-++.|.+.||+|.|++...+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~i--------~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s 85 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVFI--------KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILS 85 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh--------ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHH
Confidence 455555666677777778888887777 578999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhh----hHHHHHH
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGA----FVCGTIS 160 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g----~~~g~~~ 160 (396)
.++..+..+..+++.++++++++++++++.|+ + |+...+...++++++|||++|.++|+.. ..|+| ..++|.+
T Consensus 86 ~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 86 MLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-A-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHccCCchHHHHHHHHHHhc-c-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 99999999999999886667899999999998 5 5556789999999999999999999998 66666 4456777
Q ss_pred HHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC
Q 016048 161 ARFIS---TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKS 237 (396)
Q Consensus 161 ~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
....+ ||....+..+..++..+..++...|.|+.+.+. ++. .+ +-++.+++
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-----------------------~~~-~~--~~~~~v~~ 216 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-----------------------KPQ-LP--AQLKAVFS 216 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-----------------------ccc-ch--hHHHHHhc
Confidence 77777 999988888888888888888888876632210 000 00 22233447
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
+++.|.+.+.++.....+.++..++|.|++++||.++.+++.......+.+.+.+ ..+|+++||+|.+|++...+..++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999 899999999999999999999988
Q ss_pred HHHHHHHHhh-------hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 318 VHMFLYSVAW-------SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 318 i~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
++..+..... +...... .+.+++..+......+.++...+| ++.|.+.|+...++.+|+..-|...|..+|
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~ 374 (417)
T COG2223 296 LAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLD 374 (417)
T ss_pred HHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHH
Confidence 8888877654 1222222 344466677777888888888887 688999999999999999999999999998
Q ss_pred cccC
Q 016048 390 DCRF 393 (396)
Q Consensus 390 ~~~~ 393 (396)
..++
T Consensus 375 ~tg~ 378 (417)
T COG2223 375 LTGS 378 (417)
T ss_pred hccc
Confidence 8763
No 50
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.6e-31 Score=242.85 Aligned_cols=333 Identities=14% Similarity=0.110 Sum_probs=253.8
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA 96 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~ 96 (396)
.........|.+|.+ .++++.+..+.|+..+.+.++..+++++.|+++||+||||++..+.++..++.+.+
T Consensus 12 ~~~~~~~~~~~lp~l--------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~- 82 (355)
T TIGR00896 12 LRPALTSVGPLLPQI--------RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR- 82 (355)
T ss_pred ccCccccCcccHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-
Confidence 333446678888888 55678888999999999999999999999999999999999999998888888777
Q ss_pred hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh------hhHHHH
Q 016048 97 YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI------STSAAF 170 (396)
Q Consensus 97 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~------~~~~~f 170 (396)
.+++ ++.+++.|++.|+ +.+...+....++.|++| ++|+++++..+...++|..+++.+++.+ +||+.|
T Consensus 83 ~~~~---~~~l~~~~~~~g~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f 157 (355)
T TIGR00896 83 SAPG---TALLFAGTALIGV-GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQAL 157 (355)
T ss_pred Hhcc---HHHHHHHHHHHHH-HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 6677 8889999999999 878777778888999886 6899999999999999998888776654 288888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHH
Q 016048 171 QAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFL 250 (396)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (396)
...++..++.. ...+||.+++++++ +++++.+.++. .++|.++...+...+
T Consensus 158 ~~~~~~~~~~~---~~~~~~~~~~~~~~----------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 158 AWWALPALLAL---LAWIPQVRRRVAAN----------------------QTTTRLTPVRI----WRSPLAWQVTVFFGL 208 (355)
T ss_pred HHHHHHHHHHH---HHHhhhhccccCCC----------------------CCCCCCCCchh----hcCHhHHHHHHHHHH
Confidence 77665443322 23345543221100 00001122222 256667666666666
Q ss_pred HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHHHHHHHHHHHHHHHHHhhhh
Q 016048 251 SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-GEARLLSFGLLFGCVHMFLYSVAWSS 329 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~ 329 (396)
....+.....++|.|+++ .|+++.+.+...+...++.++++ +..+++.||+ +||+.+..+..+..++...+.+.++.
T Consensus 209 ~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH 286 (355)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 666777778899999987 59999999999999999999999 7778999999 56667777777777777666655443
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHhhccC-CccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 330 WVPYAAAVFSILSVFSHPCLRTIVSKQVA-SNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
.......+++++.+..+|...+...+..+ ++++++..++.+...+++..++|.+.|.+.|+.++.
T Consensus 287 ~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 287 GLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33333556688888888887777665554 567799999999999999999999999999988654
No 51
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.1e-31 Score=250.32 Aligned_cols=340 Identities=13% Similarity=0.091 Sum_probs=238.8
Q ss_pred hhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCc-hhHHHHHHHHHHHhhhccchh
Q 016048 44 SLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSR-NFFYAYYVLRTLTAMVCEGSI 122 (396)
Q Consensus 44 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 122 (396)
+.+..+.|+..+++.++..+++++.|+++||+|||+.+..+.++.+++.++.++.++. .+++.+.+.|++.|+ +.+..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~-~~g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW-FQGMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH-Hhhcc
Confidence 6777899999999999999999999999999999999999999999998887765321 126778899999999 88888
Q ss_pred hHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 016048 123 HCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF-----ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDL 197 (396)
Q Consensus 123 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 197 (396)
.+.....+.|++|+++|++++++.+...++|..+++.+.+. .+||+.|++.+++.++..+..++.+||+|++.+.
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 88889999999999999999999999999998888766543 3799999999988888777777778887653221
Q ss_pred ccccccchhhhhhhhhhhhhhhhhhccCCChhHHh-hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc
Q 016048 198 YTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV-HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQ 276 (396)
Q Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 276 (396)
++ .++.+++..++. .+ + .+.+.+.++.. +.+.+++.++...+..++.....++...+.|.|+++..|+++.+
T Consensus 216 ~~-~~~~~~~~~~~~---~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 288 (438)
T TIGR00712 216 PP-IEEYRNDYPDDY---NE--K-AEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK 288 (438)
T ss_pred CC-chhccccccccc---cc--c-cccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh
Confidence 10 000000000000 00 0 00111122221 22446778887777777777777788889999999888999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH---HHHHHHHHhh--hhhHHHH-HHHHHHhhhhhhhhhh
Q 016048 277 FADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC---VHMFLYSVAW--SSWVPYA-AAVFSILSVFSHPCLR 350 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~---i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~ 350 (396)
.+.......+..++++ +..+++.||+++++....+..... ++...+...+ +.+.... .+.++.+.........
T Consensus 289 ~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 367 (438)
T TIGR00712 289 SSWAYFLYEYAGIPGT-LLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIG 367 (438)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHH
Confidence 9999999999999999 777899999964332222222211 1222222211 1222111 2222322222222223
Q ss_pred HHHhhccCCccchhHhhhHHHHHHHHH-Hhhhhhhhhhhhccc
Q 016048 351 TIVSKQVASNEQGKAQGCISGICSFAN-LVSPLAFSPLTGDCR 392 (396)
Q Consensus 351 ~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~ 392 (396)
....|.+|+++||++.|+.+...++++ .++|.+.|.+.|+.+
T Consensus 368 ~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 368 LHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred HHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 467799999999999999999988875 689999999998753
No 52
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=6.9e-32 Score=253.94 Aligned_cols=334 Identities=10% Similarity=0.029 Sum_probs=245.5
Q ss_pred cchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhc--cCchhHHHHHHHHHHHhhhcc
Q 016048 42 ECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYS--RSRNFFYAYYVLRTLTAMVCE 119 (396)
Q Consensus 42 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~ 119 (396)
|++.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+ ++.+++.|+++|+ +.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~-~~ 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGL-AQ 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHH-hc
Confidence 788999999999999999999999999999999999999999999999998887554 45 7789999999999 99
Q ss_pred chhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 120 GSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 120 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
+...+....++.|++|+++|++++++...+..+|..++|++++.+ +||+.|++.+++.++..++.+...+|+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999999887754 789999999988877776666666776653
Q ss_pred cccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccc
Q 016048 195 EDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNK 274 (396)
Q Consensus 195 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (396)
+++.+ +.+++ ..+ +..++++++.+.+.++++.+ +++.++...+..++.....+....++|.|+++.+|++.
T Consensus 226 ~~~~~---~~~~~-~i~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~ 296 (465)
T TIGR00894 226 HPCIS---KFEKK-YIN-SSLQGQKGSTRQSLPIKAIP----KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSG 296 (465)
T ss_pred CCCCC---HHHHH-HHH-hhcccccCCCCCCCCHHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence 32110 00000 000 00000000111122344433 67888888888888888888888999999999899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhH--------HHHHHHHHHHHHHH--HHHhh-hhhHHHH-HHHHHHhh
Q 016048 275 NQFADLMVIAGIAGTISQLIMMPVLAPTVGEARL--------LSFGLLFGCVHMFL--YSVAW-SSWVPYA-AAVFSILS 342 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~--------~~~~~~~~~i~~~~--~~~~~-~~~~~~~-~~~~~~~~ 342 (396)
.+.+...+...++..++. ++.|++.||+++|+. +..+......+... ..... +...... ..+.+.+.
T Consensus 297 ~~~g~~~~~~~~~~~i~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 375 (465)
T TIGR00894 297 KENGLLSSLPYLFAWLCS-IFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVS 375 (465)
T ss_pred HHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Confidence 999999999999999999 778899998764321 11111111111111 11111 2222222 22223333
Q ss_pred hhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 343 VFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 343 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+...+.......|..| +.+|.+.|+.+..+.+++.++|.+.|.+.+.
T Consensus 376 ~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 376 SGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred hhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 4444555556667776 5899999999999999999999999998764
No 53
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=4.8e-32 Score=247.49 Aligned_cols=343 Identities=15% Similarity=0.163 Sum_probs=251.3
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
..+..++..++.........|.+|.++ +++++.+..+.+++.+++.+++.+++++.|+++||+|||+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMI-------KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHH-------HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 455677788888888889999999643 3467888899999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhcc-CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH-
Q 016048 86 TLSIIPLAILAYSR-SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF- 163 (396)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~- 163 (396)
++..++.+++++++ + ++.+++.|+++|+ +.+. .+....++.|++|+++|++++++.....++|..+++.++..
T Consensus 75 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS---YSVLLLLRLFIGI-AGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHhhh---HHHHHHHHHHHHH-hchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999998 8 9999999999999 7554 46678999999999999999999987777776666555432
Q ss_pred -------------hhhHHHH-HHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChh
Q 016048 164 -------------ISTSAAF-QAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSID 229 (396)
Q Consensus 164 -------------~~~~~~f-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (396)
.+||+.| ...+++..+..++.....+|+|+++++++..+... ... ..+++..+
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~ 216 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG------ARW-------SVGTGALG 216 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccccc------ccc-------cccchhHH
Confidence 2699999 44455555555555566677654332111000000 000 00001111
Q ss_pred HHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHH
Q 016048 230 DMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLL 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 309 (396)
+..+.+ ++|.++...+..++..........+.|.|+++.+|+++.+.+.+.....+..++++ ++.+++.||+++|+..
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~ 294 (366)
T TIGR00886 217 DQLKVF-RDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGGARKL 294 (366)
T ss_pred HHHHHH-hccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhccchhH
Confidence 222233 45666666666666666667778899999999899999999988888999999998 7778999999998877
Q ss_pred HHHHHHHHHHHHHHHHhh----hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHH
Q 016048 310 SFGLLFGCVHMFLYSVAW----SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFA 376 (396)
Q Consensus 310 ~~~~~~~~i~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 376 (396)
..+......+..++.... +.+.... ..+...+.+...+..++...+..| +++|+++|+.+..+++|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 295 LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 777666666555544322 2222222 333455566667778888888887 79999999999888765
No 54
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=3.9e-31 Score=243.58 Aligned_cols=344 Identities=13% Similarity=0.106 Sum_probs=252.2
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
|.+...+...+....+.+...+.+|.+. ++++.+..+.++..+.+.++..+++++.|+++||+|||+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~--------~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIA--------ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHH--------HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 3445567777788888888889999984 34567778999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.++..++..++..+++ ++.+++.|+++|+ +.+...+...+++.|++|+++|+++++..+....+|..++|.+++.+
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGI-GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 8899999999999 88888889999999999999999999999999999999999888764
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT 240 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
+||+.|++.+++.++..++..+.+||+++++++++ ....++..+.+ +++.
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~-~~~~ 204 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAA-------------------------SSKPRENSESL-LNRF 204 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCc-------------------------cchHHHHHHHH-hCHH
Confidence 79999999988888777766677787643321000 00001111122 3444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
++.......+..........+.|.+.++.+|+++.+.+...+..++..+++. +..+++.||+++|+.+..+..+..++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~~~~~ 283 (392)
T PRK10473 205 FLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLFLAAG 283 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 4443333333333333445566778888889999999999999999999999 677899999999999998888887777
Q ss_pred HHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 321 FLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 321 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
..+......+.... ..+...+.+...+. ....+..|.++|+ |..+....++..+++.+.+++.++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 284 ITLALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77666544432222 23333333333333 3334455655443 33344455666666777777766543
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=5.7e-31 Score=242.12 Aligned_cols=343 Identities=15% Similarity=0.148 Sum_probs=243.3
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhH-HHHhhhhcccccccccCCchhh-hH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGL-GTLVMMPLVGNLSDKYGRKALL-TV 83 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~~-~~ 83 (396)
+....++..++..++..+..|.+|.+..+ +++.+..+.|++.+...+ +..++.++.|+ +||+||||.+ ..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-------~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~ 87 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTD-------EVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVF 87 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHH
Confidence 45567888999999999999999998655 567778899999876655 55555555555 9999999875 45
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccc--hhHHHHHHHhhhhhhHHHHHHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRR--ASVFGIFSGIVSGAFVCGTISA 161 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~ 161 (396)
+.+..+++..+.+++++ ++.+++.+.+.|. ..+...|...+++.|+.++++| +...+..+.+.++|.++||+++
T Consensus 88 ~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~ 163 (393)
T PRK15011 88 CCLLGVLACTLFAWNRN---YFVLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA 163 (393)
T ss_pred HHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence 66666677777888888 7777665555544 3456778888999998876655 3445788888999999999998
Q ss_pred HHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC
Q 016048 162 RFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKS 237 (396)
Q Consensus 162 ~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
+.+ +||..|++.++..++..+..++.+||+++++++.+ ++.+..++ +
T Consensus 164 ~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~------~ 214 (393)
T PRK15011 164 YALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT-----------------------GTLEAPRR------N 214 (393)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc-----------------------cccccccc------c
Confidence 765 89999999988888777777777888754322100 00000000 1
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
++..+..................+.|.|+++.+|+++.+.+.+........+++. ++.|++.||++||+.+..+.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~~~~~~~~~ 293 (393)
T PRK15011 215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLMRVAAVAGV 293 (393)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHHHHHH
Confidence 1222333333333344445556788999988889999888888877777777777 777899999999998777665555
Q ss_pred HHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 318 VHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 318 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.+..+....+.+.... ..+.++..+...+....+..|..| +++|+++++.+...++|..++|.+.|.+.|+.
T Consensus 294 ~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~ 367 (393)
T PRK15011 294 CFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW 367 (393)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54444433333333322 223344455555666677888888 56999999999999999999999999999864
No 56
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=3.6e-31 Score=244.44 Aligned_cols=342 Identities=16% Similarity=0.151 Sum_probs=252.6
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
....+...++..+..|.+|.+ .++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i--------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINV--------VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 344555666778999999987 345667778899999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hh
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----ST 166 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~ 166 (396)
+.+++.++++ ++.++++|+++|+ +.+...+...+++.|++|+++|++++++......+|..+||.+++.+ +|
T Consensus 94 ~~~~~~~a~~---~~~l~~~r~l~Gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 94 ACAATLFTTS---MTQFLIARFIQGT-SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred HHHHHHHcCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 9999999999 9999999999999 77776777788999999999999999999999999999999888754 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHH
Q 016048 167 SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAI 246 (396)
Q Consensus 167 ~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
|+.|++.++..++..+..++.+||++++++++. +.+..+++..+ +.++|.++...+
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~-----------------------~~~~~~~~~~~-ll~~~~~~~~~l 225 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPF-----------------------SAKSVLRDFRN-VFRNRLFLTGAA 225 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccccCCCC-----------------------ChHHHHHHHHH-HHcCHHHHHHHH
Confidence 999999998888776666667888754322100 00001122222 236788887777
Q ss_pred HHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHH-
Q 016048 247 VAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSV- 325 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~- 325 (396)
...+..........+.|.++++.+|+++.+.++.......+..++. .+.+++.+|..+++.......+..++..++..
T Consensus 226 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~ 304 (413)
T PRK15403 226 TLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN-AIVARFVKDPTEPRFIWRAVPIQLVGLALLIVG 304 (413)
T ss_pred HHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCchhHHHHHHHHHHHHHHHHHHH
Confidence 7777777677777788999999889999999998887888888877 44445544433433332222333333322221
Q ss_pred ---hhhhh--HHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 326 ---AWSSW--VPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 326 ---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
..+.+ ......+++.+.+...|...+..-+. .+..+|++.|+.+.....+...++...|++.++
T Consensus 305 ~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 305 NLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 12222 12234555677777777776533222 223479999999999999999999999988766
No 57
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=6e-31 Score=242.47 Aligned_cols=349 Identities=13% Similarity=0.097 Sum_probs=256.8
Q ss_pred CCccccchHHH---HHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCC
Q 016048 1 MEKKSGVSHLF---ITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGR 77 (396)
Q Consensus 1 m~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 77 (396)
|||+++...+. ...++..+......|.+|.+ .++++.+..+.+++.+++.++..+++++.|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADM--------ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 56665544443 44445556667888888888 44567888899999999999999999999999999999
Q ss_pred chhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 78 KALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 78 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
|+++..+..+..++.++..++++ ++.+++.|++.|+ +.+...+....+..|.+++++|+++.+..+.+..++..++
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGL-GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHh-hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 9999999999999 8788788888899999999999999999999999999999
Q ss_pred HHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhh
Q 016048 158 TISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVH 233 (396)
Q Consensus 158 ~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
|.+++.+ +||+.|++.++..++..+...+..||++++++++ + +.++.++
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~-------~~~~~~~ 201 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR--------------------T-------RVLASYR 201 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch--------------------h-------HHHHHHH
Confidence 8888764 7999999988877766665556778765432200 0 0111122
Q ss_pred hhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHH
Q 016048 234 LLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGL 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 313 (396)
...++|.++......+.............+.++++.+|+++.+.+.......++.+++. .+.+++.||.+++.......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~~~~~ 280 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMWQSVIC 280 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 22356666554444444444444445566778888789999988888888888888888 66678888887433322222
Q ss_pred HH-HHHHHHHHHHh--hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 314 LF-GCVHMFLYSVA--WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 314 ~~-~~i~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
.. ..+........ .+.+.... ..+.+.+.+...|...+...|..| +++|++.++.+....+|..+++.+.+.+.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 281 CLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 22 22221111111 12222222 455577778888999999999887 688999999999999999999999887764
Q ss_pred c
Q 016048 390 D 390 (396)
Q Consensus 390 ~ 390 (396)
.
T Consensus 360 ~ 360 (394)
T PRK11652 360 T 360 (394)
T ss_pred C
Confidence 3
No 58
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=9.3e-32 Score=252.61 Aligned_cols=344 Identities=14% Similarity=0.059 Sum_probs=238.7
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
..+...++..++.....|.+|.+ .++++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~l--------~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~ 111 (476)
T PLN00028 40 LSWISFFTCFVSTFAAAPLLPII--------RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 33445556666666667777777 4456788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH-----
Q 016048 89 IIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF----- 163 (396)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----- 163 (396)
+++.++.+++++ ++.+++.|++.|+ +.+.. +....+++|++|+++|++++++.....++|..+++.+...
T Consensus 112 ~~~~~~~~~~~s---~~~l~~~r~l~G~-~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~ 186 (476)
T PLN00028 112 APAVFCMSLVSS---ATGFIAVRFFIGF-SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLI 186 (476)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHH-HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 8899999999998 76654 3456789999999999999999987666666655433321
Q ss_pred --------hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 164 --------ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 164 --------~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
.+||+.|++.+++.++..+..+++.+|.|+.+. + + . . + +.+.++.+..+.++..
T Consensus 187 ~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~-~----~---~-~--------~-~~~~~~~~~~~~~~~~ 248 (476)
T PLN00028 187 KDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY-R----E---L-K--------K-SGTMPKDSFSKVLRYG 248 (476)
T ss_pred HhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch-h----h---H-H--------h-cCccccccHHHHHHHH
Confidence 379999999999888776666554444332210 0 0 0 0 0 0000011111222222
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh-------H
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR-------L 308 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-------~ 308 (396)
.++++.+...+..++.........+++|.|+.+.+|+++.+++.+.+..+++..+++ ++.|+++||++||+ .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r~~~~~r~~~ 327 (476)
T PLN00028 249 VTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARRFGMRGRLWA 327 (476)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhcCcchhHHH
Confidence 245666666665555555556677788999988889999999999999999999999 77889999997651 2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 309 LSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 309 ~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
......+.++..+++....+.+.... ..+++++.....+..+++..+..| +++|++.|+.+..+.+|+.++|.+.+
T Consensus 328 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~ 404 (476)
T PLN00028 328 LWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF 404 (476)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH
Confidence 22333333333333333333222222 334455555555666666666654 79999999998877777777776654
No 59
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=3.5e-31 Score=244.05 Aligned_cols=350 Identities=13% Similarity=0.071 Sum_probs=244.2
Q ss_pred HHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHH
Q 016048 16 VHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAIL 95 (396)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~ 95 (396)
.+.++.....+..+.+..+...+ .++...+........+...++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPP-SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCC-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555543211 11111212222223344455566789999999999999999999999999999999
Q ss_pred HhccCchh-----HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH-------
Q 016048 96 AYSRSRNF-----FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF------- 163 (396)
Q Consensus 96 ~~~~~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------- 163 (396)
+++++... .+.+++.|+++|+ +.+...+...+++.|++|+++|++..+..+.+..+|.++++.++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGF-SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHh-hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99988221 1257899999999 8888889999999999999999999999999999999999877643
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 164 -----ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 164 -----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
.+||+.|++.+++.++... .....||+++++++ ++++++.+.+.++.+ +++
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~---~~~ 217 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLY-LRRNLEETPVFEKA--------------------QEKHKKKRGPIRETL---TKH 217 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHHH--------------------HhccccccCCHHHHH---Hhc
Confidence 3789999887766554433 33455665432210 000111122333333 222
Q ss_pred h-hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 239 P-TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
+ .++......++..........+.|.|.++.+|.++.+.+.......+...++. ++.+++.||++||+.+.....+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLIIFTVLAA 296 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHH
Confidence 2 35555555666666667778889999988889999999999999999999998 777899999999997765544433
Q ss_pred HHH-HHH-HHh--hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhH-HHHHHHHHHhhhhhhhhhhhcc
Q 016048 318 VHM-FLY-SVA--WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCI-SGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 318 i~~-~~~-~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.. ... ... .+.+.... ..+.+++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+.|.+.|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 297 LLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 322 222 221 22222222 34456667778888999999999999999999985 4556688999999999999976
Q ss_pred c
Q 016048 392 R 392 (396)
Q Consensus 392 ~ 392 (396)
+
T Consensus 377 g 377 (394)
T TIGR00883 377 G 377 (394)
T ss_pred C
Confidence 5
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=5.9e-31 Score=238.68 Aligned_cols=321 Identities=22% Similarity=0.332 Sum_probs=279.7
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
..+....+...++.....+..|.+.++ .+.+..+.+++.+.+.++..+++++.|+++||+|||+.+..+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~ 73 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAED--------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLL 73 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHH
Confidence 345677788888999999999998544 356778899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh---
Q 016048 88 SIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--- 164 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--- 164 (396)
..++.+...++++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++.+++.+...++|..++|.+++.+
T Consensus 74 ~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 149 (352)
T cd06174 74 FALGSLLLAFASS---LWLLLVGRFLLGL-GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES 149 (352)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHc-ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 9999999999999 88999999999999999999999999999999999999999998876
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHH
Q 016048 165 -STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQ 243 (396)
Q Consensus 165 -~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (396)
+||+.+++.++..++..+...+ .+ |.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------------------------------~~~~~ 179 (352)
T cd06174 150 LGWRWLFLILAILGLLLALLLLF-LL-------------------------------------------------RLLLL 179 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-HH-------------------------------------------------HHHHH
Confidence 6899999888877776655422 22 34555
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh-HHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR-LLSFGLLFGCVHMFL 322 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~~~~i~~~~ 322 (396)
..+..++..........+.|.+.++.+|.++.+.+.......++..++. ++.+++.||++||+ .+..+..+..++.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 6666677777778888899999998889999999999999999999999 77789999999999 999999998888888
Q ss_pred HHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 323 YSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 323 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+...++.+.... ..+.+.+.+...+...++..|..|+++|++.+|+.+....++..++|.+.|.+.|..
T Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~ 328 (352)
T cd06174 259 LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328 (352)
T ss_pred HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 887765444444 556688888899999999999999999999999999999999999999999999754
No 61
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=6.5e-31 Score=239.54 Aligned_cols=343 Identities=13% Similarity=0.119 Sum_probs=258.8
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
|+++...+..++....+.+..|+.+.+. +.++++|..|.+++.+++.+++.++.++.|++.||+|.|+++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~-------~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~ 106 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLN-------KIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 4566667777777788888888877762 236889999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhc-----cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH--
Q 016048 85 ITLSIIPLAILAYS-----RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG-- 157 (396)
Q Consensus 85 ~~~~~~~~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-- 157 (396)
.++.++..+..+++ ++ ++.+++.|++.|+ + +..++.....+++|+|+|+||+++|+.....++|..++
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gi-g-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGF-A-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHH-H-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999986 67 9999999999999 7 66788999999999999999999999976666666544
Q ss_pred --HHHHH------------------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhh
Q 016048 158 --TISAR------------------FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTK 217 (396)
Q Consensus 158 --~~~~~------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~ 217 (396)
|.+.. ..+||..+++..++.++..++.++..+|.++++
T Consensus 182 l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~---------------------- 239 (462)
T PRK15034 182 VAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSR---------------------- 239 (462)
T ss_pred HHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc----------------------
Confidence 43321 123677777777777776666666655433211
Q ss_pred hhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q 016048 218 KLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMP 297 (396)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (396)
.+.++.++.+ |+|+.|...+.+++....+.++..++|.|.++.+ +............+...+.+ +++|
T Consensus 240 --------~~~~~~~~vl-k~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r-plgG 307 (462)
T PRK15034 240 --------ASIADQLPVL-QRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR-SVGG 307 (462)
T ss_pred --------cCHHHHHHHh-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH-HhhH
Confidence 1334444444 5788899999999988888889889999998865 33322223334566777777 7889
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHHHH-hh-----hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCC-----------
Q 016048 298 VLAPTVGEARLLSFGLLFGCVHMFLYSV-AW-----SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVAS----------- 359 (396)
Q Consensus 298 ~l~~~~g~~~~~~~~~~~~~i~~~~~~~-~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~----------- 359 (396)
+++||+|+++++..+.+...++...... .+ +.+.... .+.+.+..+..+...+-++.+.+|+
T Consensus 308 ~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 308 AISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccccc
Confidence 9999999999998888777666543222 22 1122222 2223455666677777777777774
Q ss_pred ----------ccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 360 ----------NEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 360 ----------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
++.|.+.|+....+.+|+++-|.+.|...+..++
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~ 431 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGS 431 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCC
Confidence 1678999999999999999999999999887654
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=8.4e-31 Score=240.25 Aligned_cols=330 Identities=14% Similarity=0.155 Sum_probs=246.1
Q ss_pred hhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhc
Q 016048 19 FSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYS 98 (396)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~ 98 (396)
++.++..|.+|.+. ++++.+..+.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+++.++
T Consensus 5 ~~~~~~~p~~~~~~--------~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 5 LAIDMYLPALPVIA--------ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA 76 (377)
T ss_pred hHHHHHhccHHHHH--------HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999984 4567788899999999999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHH
Q 016048 99 RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAAT 174 (396)
Q Consensus 99 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~ 174 (396)
++ ++.+++.|++.|+ +.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+ +||+.|++.+
T Consensus 77 ~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 152 (377)
T PRK11102 77 QT---IDQLIYMRFLHGL-AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLA 152 (377)
T ss_pred cc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 98 8999999999999 88888889999999999999999999999999999999999888764 8999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHh
Q 016048 175 AGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLA 254 (396)
Q Consensus 175 ~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (396)
++.++..++..+.+||+++++++++. +.++..++..+.+ ++|..+...+...+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 209 (377)
T PRK11102 153 LAAILAAALVFFFIPETLPKERRQPF----------------------HLRTTIRNFASLF-RHKRVLGYMLASGFSFAG 209 (377)
T ss_pred HHHHHHHHHHHHhCCccCcccccCCC----------------------ChHHHHHHHHHHH-cChHHHHHHHHHHHHHHH
Confidence 88877776666777876543221000 0000011112222 456665555555555555
Q ss_pred hhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH---Hhh-hhh
Q 016048 255 DAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS---VAW-SSW 330 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~---~~~-~~~ 330 (396)
......+.|.++.+.+|+++.+.+.......+..+++. +..+++.||+|+|+.+..+..+..+..+.+. ..+ +.+
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFW 288 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 55556667778888889999999999999999999999 7778999999999988887765443322222 111 122
Q ss_pred HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHHhhhhhhh
Q 016048 331 VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FANLVSPLAFS 385 (396)
Q Consensus 331 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g 385 (396)
.... ..+...+.+...+.......|..| +++|+++++.+.... +|..+++.+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 289 ALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222 222333344445555666777776 899999999877654 66666666543
No 63
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=1.1e-30 Score=241.37 Aligned_cols=338 Identities=17% Similarity=0.125 Sum_probs=254.3
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
.+.+...+..++.+++.|.+|.+ .++++.+..+.|+..+++.++..++++++|+++||+|||+.+..+..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i--------~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAI--------QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHH--------HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 34445666777888888988887 4456778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----
Q 016048 89 IIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI---- 164 (396)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~---- 164 (396)
.++.+++.++++ ++.+++.|+++|+ +.+...+...+++.|++|++++++..+.......+|..++|.+++.+
T Consensus 82 ~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 82 ALGSLGMLWVES---AAQLLVLRFVQAV-GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHHHHHHHHhcC---HHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999998 9999999999999 77777778889999999999999999998888888888888888764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHH
Q 016048 165 STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQA 244 (396)
Q Consensus 165 ~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (396)
+||+.|++.++..++..+.. +.++|+++++++ ++++.++++. + ++|.++..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------------~~~~~~~~~~---~-~~~~~~~~ 208 (401)
T PRK11043 158 GWQAIFATLFAITLLLILPT-LRLKPSKKARKQ------------------------SQDALTFKQL---L-KSKTYLGN 208 (401)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HHcCCCCCcccc------------------------chHHHHHHHH---H-cChhHHHH
Confidence 89999998888777765554 445554322110 0000112222 2 45555544
Q ss_pred HHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 016048 245 AIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS 324 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 324 (396)
.+...+....+.....+.|.+.++ +|+++.+.+.......++..++. +..+++.||+++|+..........++...+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~ 286 (401)
T PRK11043 209 VLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFAVSVIAIW 286 (401)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555666778888765 59999988988887888888888 6778999999988876555544444433222
Q ss_pred ---Hh--hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 325 ---VA--WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 325 ---~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.. ++.+.... ..+.+.+.+..+|...+...|..| +++|++.|+.+..+..+...++.+.|.+.|.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 287 LASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 21 12222222 344566777888888888777776 6899999999999999999999999988774
No 64
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.5e-31 Score=247.42 Aligned_cols=342 Identities=13% Similarity=0.064 Sum_probs=247.2
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHH-HHHHHhhhc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYV-LRTLTAMVC 118 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~ 118 (396)
.++++.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++ ++.+++ .|++.|+ +
T Consensus 46 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~l~G~-~ 121 (455)
T TIGR00892 46 QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN---VIELYLTAGFITGL-G 121 (455)
T ss_pred HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh-c
Confidence 4567788889999999999999999999999999999999999999999999999999988 777764 5799999 8
Q ss_pred cchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 119 EGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
.+...+...+++.|+++ ++|+++.++.+.+..+|..++|.+++.+ +||+.|++.+++.++..+..++..|+.+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~ 200 (455)
T TIGR00892 122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ 200 (455)
T ss_pred chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 77766777788899996 7899999999999999999998887754 899999999988776655544444432221
Q ss_pred cccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccc
Q 016048 195 EDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNK 274 (396)
Q Consensus 195 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (396)
+..++... +..+.+...+..+.+...++..+..+ ++.+ ++|.++......++....+.....++|.|.++ .|+++
T Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~ 275 (455)
T TIGR00892 201 RVSKSKSK--EGLPPDGSTKKLSKKSTAEKINRFLD-FSLF-THRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDE 275 (455)
T ss_pred cccccccc--ccCCCCCccccccccchhhhhhhhcc-hHHh-cCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCH
Confidence 11000000 00000000000000000000011111 1223 56778777777777777777778889999876 59999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhh--cchhHHH--HHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhh
Q 016048 275 NQFADLMVIAGIAGTISQLIMMPVLAPTV--GEARLLS--FGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCL 349 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 349 (396)
.+.+...+..+++.++++ +..+++.||. ++|+... .+....+++.++.....+.+.... .++.+++.+...+..
T Consensus 276 ~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~ 354 (455)
T TIGR00892 276 YEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALL 354 (455)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHH
Confidence 999999999999999998 6778999873 3333332 233333444444444444444333 556677888888889
Q ss_pred hHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 350 RTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 350 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.+++.|.+|++++++++|+.+...++|+.++|.++|.+.|...
T Consensus 355 ~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 355 FEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 9999999999999999999999999999999999999998754
No 65
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.6e-31 Score=253.92 Aligned_cols=373 Identities=14% Similarity=0.168 Sum_probs=258.1
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.+..+++..++..++.....+.+|.+ .++++.+..+.+++.+.+.+++.+++++.|+++||+|||+.+..+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i--------~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 92 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEV--------QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISI 92 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34466778888888888888888887 3456778889999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.++.+++++ ++.+++.|++.|+ +.+...+....++.|++|+++|+++++......++|..++|.+++.+
T Consensus 93 ~~~~~~~~~~~~~~~---~~~l~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 93 VLFSVGTLACGFAPG---YWTLFIARLVIGM-GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHHHHHhH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988 9999999999999 88888899999999999999999999999999999999999888765
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhh---hhhhhhhhh------------hhhhccCC
Q 016048 165 ---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEIS---ASCEESTKK------------LQVFKRLP 226 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~---~~~~~~~~~------------~~~~~~~~ 226 (396)
+||+.|++..+..++ .+.....+||+++.+++++...+.++..+ ..++..... ........
T Consensus 169 ~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (496)
T PRK03893 169 PVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQN 247 (496)
T ss_pred ccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 799999875443333 33333456665432111000000000000 000000000 00000000
Q ss_pred ChhH-------------H-hhh-hcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHH
Q 016048 227 SIDD-------------M-VHL-LKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTIS 291 (396)
Q Consensus 227 ~~~~-------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 291 (396)
.+.- . .+. .++.+.........+...........++|.|+++.+|+++.+.+.+.+...++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g 327 (496)
T PRK03893 248 AAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVG 327 (496)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000 0 000 000111111111111111112234578899998778999999999999999999999
Q ss_pred HHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhh--hHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhh
Q 016048 292 QLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSS--WVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC 368 (396)
Q Consensus 292 ~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 368 (396)
. ++.+++.||+++|+.+..+..+..+..+.+....+. +.... .++.+.......+...+++.|.+|+++||+++|+
T Consensus 328 ~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 406 (496)
T PRK03893 328 C-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGF 406 (496)
T ss_pred H-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccch
Confidence 9 777899999999998887776665554443332221 11111 1222223333456677889999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccc
Q 016048 369 ISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 369 ~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
.+....+|..++|.+.|.+.|+.+
T Consensus 407 ~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 407 TYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred hhhhhhHHHHHHHHHHHHHhccCC
Confidence 999999999999999999998754
No 66
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-30 Score=233.29 Aligned_cols=338 Identities=20% Similarity=0.237 Sum_probs=251.1
Q ss_pred HHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHH
Q 016048 48 YLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSL 127 (396)
Q Consensus 48 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 127 (396)
...+.+.+++.+|.++|++..|.++||+|||..+.++.++..++.++..++...+.+++++++|++.|+ ..+.......
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl-~~gl~~~~~p 138 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGL-ACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HhHHHHHHHH
Confidence 456899999999999999999999999999999999999999888888877655559999999999999 8899999999
Q ss_pred HHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH--h----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC-----cc
Q 016048 128 AYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF--I----STSAAFQAATAGSIISAVYMRIFLPESVRD-----ED 196 (396)
Q Consensus 128 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~--~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~-----~~ 196 (396)
.|+.|..|++.||......+.+..+|.+++..++.- + .|++.+....+++++..+.. .++||+|+. ++
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k~~ 217 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKKGD 217 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHcCC
Confidence 999999999999999999999999999998666532 2 58888888888777766644 889999972 22
Q ss_pred c---ccccccchhhh--hhhhhhh-hh---hhhhhccCCChhHHhhhhcCChhHHHH----HHHHHHHHHh-hhhhhhhH
Q 016048 197 L---YTPILSSKAEI--SASCEES-TK---KLQVFKRLPSIDDMVHLLKSSPTFSQA----AIVAFLSNLA-DAGLQGSM 262 (396)
Q Consensus 197 ~---~~~l~~~~~~~--~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~ 262 (396)
+ ++.++..+.++ +++.+++ ++ ++.+++++.++++.+ +++..+.- +...+.+.+. ......+.
T Consensus 218 ~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~----~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Ys 293 (485)
T KOG0569|consen 218 EEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLL----KNPTLRRPLLIGIVVSFAQQFSGINAIFFYS 293 (485)
T ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHh----cCcchhHHHHHHHHHHHHHHhcCcceeHHHH
Confidence 2 33444433332 2222111 11 111122445666765 34333332 2233333332 23333333
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh------hhHHHH--
Q 016048 263 MYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS------SWVPYA-- 334 (396)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~-- 334 (396)
..++++ .|++..++.+.....++..++.+ +++.++.||.|||+++..+..++.+..+++..... .|..+.
T Consensus 294 t~i~~~-aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 294 TSIFKT-AGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 444444 49999999999999999999999 88889999999999999999998888777664321 222221
Q ss_pred --HHHHHHhh-hhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 335 --AAVFSILS-VFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 335 --~~~~~~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.++..+.+ .+..|..+-+.+|++|++.|+.++++....+++.+++-...+.++.+..+.
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~ 433 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP 433 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22223333 345789999999999999999999999999999999999999888876653
No 67
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=1.9e-30 Score=242.25 Aligned_cols=357 Identities=15% Similarity=0.191 Sum_probs=292.6
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+.+.+..++.+..++.++..+....++.++.+ ..-|+...+++.++..+..++.+++.|.++||++|||+++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~--------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ--------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 45678889999999999999999999988655 3455678999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhc--cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHH
Q 016048 83 VPITLSIIPLAILAYS--RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTIS 160 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 160 (396)
.+.++.++..+..++. .+..+.+.+++.-++.|+ +.+...|+.++++.|..|+|+..+++++.+...++..++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~-~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI-GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9998877655444432 222238889999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhc
Q 016048 161 ARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLK 236 (396)
Q Consensus 161 ~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
+|.+ |-.+.|.+.++..++..... ...+.++++++ .+.++.....++.++.++
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~l-~~~~~~~~~~~----------------------~~~e~~~~~l~~G~ryv~ 215 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILAL-LRWKPPPPPSS----------------------LPRERFFSALREGLRYVR 215 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccccccccc----------------------cchhhhhhhHHHHHHHHh
Confidence 9875 66788888877666554433 33333221111 011122345777788888
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
++|.++..++..++..+........+|.+.++.+|.++...|++.+..+++.+++. ++.+++.+|+++++++..+.+..
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHHHHHH
Confidence 88888877776666666666667788999999999999999999999999999999 66778999999999998999999
Q ss_pred HHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 317 CVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 317 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
+++++.+++.++.+.... .++.|.+.........+..++..|++.||++++++++....+..+|..+.|.+.|+.+
T Consensus 295 a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 295 ALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998888888887776555 5555777888888889999999999999999999999999999999999999998764
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-33 Score=243.14 Aligned_cols=360 Identities=16% Similarity=0.185 Sum_probs=261.1
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.+..+++...+...+.+.+..+.+.. ++.++.+.+..|++++.+.+.+++.+|+.|+++|||+||+++.++
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v--------~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG 104 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEV--------QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVG 104 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHH--------HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeH
Confidence 345667888888888888887776666 667888889999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
..++.++.+.++++.. ||+++++|.+.|+ |.+...|+.+++++|.+|+++|++++++++....+|..+|.+.+..+
T Consensus 105 ~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 9999999999999977 9999999999999 99999999999999999999999999999999999988887777654
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCCh
Q 016048 165 -----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSP 239 (396)
Q Consensus 165 -----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (396)
.|||.|+..+++.+++.++..++.+|++++++++. +.+.+..++....++|..... +++
T Consensus 181 a~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~---------------~~~~~~~~~~ts~~kDl~~l~-~~~ 244 (493)
T KOG1330|consen 181 ASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV---------------DGENKMVKPFTSVWKDLKVLA-KIK 244 (493)
T ss_pred ccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccc---------------ccCCcCCCCccchHHHHHHHH-ccC
Confidence 49999999999999999999899998876432100 000111122333455554444 345
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhh---hhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcc----hhHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLK---AKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGE----ARLLSFG 312 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~----~~~~~~~ 312 (396)
.+....+......+....+..+.|.+.. +..|++..+..++..+...++.+|. +++|.++||+.| .......
T Consensus 245 v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~~~~~~~~~~~~~ 323 (493)
T KOG1330|consen 245 VFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLSRIFPNSGTLRAS 323 (493)
T ss_pred ceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHHHHhcccccchhHH
Confidence 5554455554444444444445554433 2336677776777777888888888 788899998432 1222222
Q ss_pred HHHHHHH-------HHHHHHhhh--hhHHHHHHHHHHhhhh-hhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHHhhh
Q 016048 313 LLFGCVH-------MFLYSVAWS--SWVPYAAAVFSILSVF-SHPCLRTIVSKQVASNEQGKAQGCISGICS-FANLVSP 381 (396)
Q Consensus 313 ~~~~~i~-------~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~ 381 (396)
.+..+.+ +.+...... .+..++.++++..... ......-+..|.+|+++|.++.++...+.. +|.+-+|
T Consensus 324 q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p 403 (493)
T KOG1330|consen 324 QLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASP 403 (493)
T ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCc
Confidence 2222221 222221111 2222333444443333 345666778899999999999999998877 5666666
Q ss_pred hhhhhhhhcccC
Q 016048 382 LAFSPLTGDCRF 393 (396)
Q Consensus 382 ~~~g~l~~~~~~ 393 (396)
.+.|.+.|+..+
T Consensus 404 ~ivGilsd~l~g 415 (493)
T KOG1330|consen 404 YIVGILSDKLRG 415 (493)
T ss_pred ceehhHHHHhhC
Confidence 699999987543
No 69
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.98 E-value=9.1e-31 Score=223.07 Aligned_cols=358 Identities=19% Similarity=0.289 Sum_probs=248.7
Q ss_pred cccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCc
Q 016048 22 SMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSR 101 (396)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~ 101 (396)
+-..|.....+.+......++.+.+....|++.+.+.+.+.+.++.+|.++||+|||+++++++...+++..+.+.+.|
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~- 120 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN- 120 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4444454444444222223333467788999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHhhh------HHHHHHH--
Q 016048 102 NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFIST------SAAFQAA-- 173 (396)
Q Consensus 102 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~~------~~~f~~~-- 173 (396)
+..+++.|++.|+ ..+.. ....++++|+.++|+|++.++.++..+++|.++||.+|+++.. +.+|...
T Consensus 121 --F~afv~aR~l~Gi-~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~ 196 (451)
T KOG2615|consen 121 --FAAFVLARFLGGI-FKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCL 196 (451)
T ss_pred --HHHHHHHHHhhhh-ccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHH
Confidence 9667777999999 76655 5789999999999999999999999999999999999998743 2233332
Q ss_pred --HHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCCh------hHHHHH
Q 016048 174 --TAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSP------TFSQAA 245 (396)
Q Consensus 174 --~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 245 (396)
.+....-.....+++||+-+.+++.+ + +.+..+.. +++ ++..+ .++..-...+++.| .+....
T Consensus 197 ~v~i~a~~~v~~~~~~lpETL~~rk~~~---~-~~~~~~~~-~~~--~~~~~--~~~~~~v~~lrn~p~~~~i~~~~i~~ 267 (451)
T KOG2615|consen 197 LVFILAAGDVTFFPWFLPETLPLRKRND---E-HSTLQEAA-DDR--LALLK--FARIFKVAALRNPPLLDFISVLRIFG 267 (451)
T ss_pred HHHHHHHHHHHHHHHhCCccccchhhcc---c-ccchhhhh-hhh--hhhcc--hhhhhhhhhhcCccccchHHHHHHHH
Confidence 22222212334578999865544320 0 00000000 000 00000 00111111122111 122334
Q ss_pred HHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc--chhHHHHHHHHHHHHHHHH
Q 016048 246 IVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG--EARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~ 323 (396)
+..+.+...+.+.....+.+..+.+|+++.+.|.+++..++...+.+.... ...||.. .+-.+..+..++.-.++++
T Consensus 268 l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~-~~l~~~~~~~~a~l~~~l~~~vP~~lll 346 (451)
T KOG2615|consen 268 LHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALV-PILPRYKGNIKAVLLFSLLLIVPAFLLL 346 (451)
T ss_pred HHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhcc-ccccccccchhhHHHHHHHHHHHHHHHH
Confidence 445555555555665566666678899999999999999999999994443 4556544 4445555666666666666
Q ss_pred HHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 324 SVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
.....+..... ..+..+......+....++.+..|+++||+++|+....+.++.++||.+.|.+..|...+
T Consensus 347 s~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~ 418 (451)
T KOG2615|consen 347 SLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGA 418 (451)
T ss_pred hccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCC
Confidence 66666555544 444566677778889999999999999999999999999999999999999999886543
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.98 E-value=5.2e-30 Score=234.95 Aligned_cols=340 Identities=15% Similarity=0.054 Sum_probs=253.2
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCc----hhhhHH
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRK----ALLTVP 84 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk----~~~~~~ 84 (396)
......+...++.++..|.+|.+.+| .+.|..+.|++.+++.++..++++++|+++||+||| +.+.+.
T Consensus 8 ~~~~~~~~~~~~~g~~~p~l~~~l~~--------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~ 79 (382)
T PRK11128 8 WLALSYFGYFFAYGVFLPFWSVWLKG--------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALL 79 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHh--------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHH
Confidence 34445667778889999999999644 467789999999999999999999999999999994 333322
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.... .......+++ +|.+++.|++.|+ +.+...|...++..|+ +++|+++++......++|..+||++++.+
T Consensus 80 ~~~~--~~~~~~~~~~---~~~l~i~~~l~g~-~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l 151 (382)
T PRK11128 80 TLLF--AVAFWFGAHS---FWLLFVAIGLFNL-FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKL 151 (382)
T ss_pred HHHH--HHHHHHhccc---HHHHHHHHHHHHH-HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 2221 2223344566 8999999999998 7788888888888876 36678888888888899999999999875
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT 240 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
+||..|++.++..++..+ ..+..||++++++++ ++.++...++++ +.|+|.
T Consensus 152 ~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~----i~~~~~ 206 (382)
T PRK11128 152 VSWFGEQAILWILTAGVASMLL-GQLLRPTIMPQGESR--------------------QQESAGWPAWKA----LLKEPT 206 (382)
T ss_pred HHHcChhHHHHHHHHHHHHHHH-HHHccCCCCCccccc--------------------cccccccchHHH----HHcChh
Confidence 899999887765444333 334445532221100 000011123333 336778
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
++...+..++..........+.|.|+++ .|.++.+.+.+.....+..++.. ...+++.||+++|+.+..+....+++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8777777776666677777888999866 69999999999998888888888 677899999999999999998888888
Q ss_pred HHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHH-HHHHHHhhhhhhhhhhhccc
Q 016048 321 FLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGI-CSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 321 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~ 392 (396)
+++...++.+..+. .++.+++.+...+....+..+. +++++++.++..+.. ..+|..++|.+.|.++|+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 285 GLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 87777776665544 4555777777788888888886 567779999988744 56788999999999999864
No 71
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.3e-30 Score=239.24 Aligned_cols=338 Identities=15% Similarity=0.117 Sum_probs=270.0
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhcc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCE 119 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 119 (396)
+.+++.+..+.|++.+.+..|+++++.+.|+++||+|-|+++..+.++.++++++...+.+.+ ++.+++.|+++|+ +.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-~~~~~~~R~lqGl-~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG-FYLLLVLRFLQGL-GQ 142 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-chhhHHHHHHhHH-HH
Confidence 457889999999999999999999999999999999999999999999999999999886644 5678999999999 99
Q ss_pred chhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 120 GSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 120 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
+...|+...+.++|.|++||++..++...+..+|.+++.++++.+ ||+.+|++.++++++..++..++..|+|.+
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999988888765 899999999999999988877778888776
Q ss_pred cccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccc
Q 016048 195 EDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNK 274 (396)
Q Consensus 195 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (396)
++... +.|. +.-++...+++.+++.+.++++++ +++.++...+..++.....+.+..+.|.|+++.+|++.
T Consensus 223 h~~is---~~El--~~I~~~k~~~~~~~~~~vP~~~i~----ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v 293 (466)
T KOG2532|consen 223 HPNIS---EKEL--KYIEKGKSEAHVKKKPPVPYKAIL----TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDV 293 (466)
T ss_pred CCCCC---HHHH--HHHHhcccccccCCCCCCCHHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCh
Confidence 43100 0000 000000001111111456888876 88999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhhcc---------hhHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHhhh
Q 016048 275 NQFADLMVIAGIAGTISQLIMMPVLAPTVGE---------ARLLSFGLLFGCVHMFLYSVAWSSW--VPYAAAVFSILSV 343 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---------~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~ 343 (396)
.+.|++.++..+...+.. +++|.++||..+ |-.-.++....+++++.+++.+... .....+.+..+..
T Consensus 294 ~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~ 372 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS 372 (466)
T ss_pred hhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc
Confidence 999999999999999999 788999998754 3344566677777777777766422 2333444444444
Q ss_pred hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 344 FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
+........-.....|++.+..+|+.+....+.++++|.+.|.+..
T Consensus 373 g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 373 GFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred ccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 4443333333333245999999999999999999999999999884
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.6e-30 Score=239.15 Aligned_cols=361 Identities=13% Similarity=0.042 Sum_probs=248.1
Q ss_pred CccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhh
Q 016048 2 EKKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALL 81 (396)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~ 81 (396)
.+++..+.+.+..++..++.+...|.+|.+..+ +++.+..+.|++.+++.++..++++++|+++||+|||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~ 79 (420)
T PRK09528 7 LKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-------INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL 79 (420)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 355677777888899999899999999999765 4678889999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHH---hccCc--hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHH
Q 016048 82 TVPITLSIIPLAILA---YSRSR--NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 156 (396)
+++..+.++...... .++.. .......++++..|. +.....+....+..+. ++++++.++......++|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i 156 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGF-GFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWAL 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHH
Confidence 887666554433221 11110 001122334444444 3333333344443332 245677888888889999999
Q ss_pred HHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhh
Q 016048 157 GTISARFI---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVH 233 (396)
Q Consensus 157 g~~~~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
+|.+++.+ +|+..|++.+++.++..++.+...||++++++.++ + +++++++.+.++..+
T Consensus 157 ~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-------~~~~~~~~~~~~~~~ 218 (420)
T PRK09528 157 CAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVAN-----------A-------LGANASAVSLKDALA 218 (420)
T ss_pred HHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhcc-----------c-------hhcccccccHHHHHH
Confidence 99998876 78999998888777666555444444332211000 0 000111223444444
Q ss_pred hhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHH
Q 016048 234 LLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKF---HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLS 310 (396)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 310 (396)
.+ ++|.++...+........+.....++|.|+.+.+ +.+..+.+.+.+...+...++. +..+++.||+++|+.+.
T Consensus 219 ~l-~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~ 296 (420)
T PRK09528 219 LL-KLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNALL 296 (420)
T ss_pred Hc-cCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchhhH
Confidence 44 4555554444444444444445556777776543 4556677888888888888888 77789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhh-HHHHHHHHHHhhhhhhhhhh
Q 016048 311 FGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC-ISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 311 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~ 388 (396)
.+..+.+++..++.+..+.+.... ..+.+.+.+...+....++.|.+|++.+++..+. .++...+|..++|.+.|++.
T Consensus 297 ~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 297 LAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777666654443 3344555666667777888999999999998776 67778899999999999999
Q ss_pred hccc
Q 016048 389 GDCR 392 (396)
Q Consensus 389 ~~~~ 392 (396)
|..+
T Consensus 377 ~~~G 380 (420)
T PRK09528 377 DSIG 380 (420)
T ss_pred HhhC
Confidence 9764
No 73
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=6.3e-30 Score=232.48 Aligned_cols=318 Identities=12% Similarity=0.057 Sum_probs=234.0
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-----CCchhh-hHHHHHhHHHHHH
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-----GRKALL-TVPITLSIIPLAI 94 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~~-~~~~~~~~~~~~~ 94 (396)
.+...+.+|.+. +|+++|..+.|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++....
T Consensus 4 ~~~~~~~~~~~~--------~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 4 LGLVGNTLPYWL--------RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred chhHHhHHHHHH--------HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 345667778773 3567888899999755 455554 88999999998 899974 5677778787777
Q ss_pred HHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----h-----
Q 016048 95 LAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----S----- 165 (396)
Q Consensus 95 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~----- 165 (396)
.++.++..+.+.+....++.++ +.+...+...+++.|++|+|+|+++.++...+.++|.++++.+++.+ +
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAF-FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 7777554447777788888888 77888899999999999999999999999999999999999888654 6
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh--
Q 016048 166 ---TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT-- 240 (396)
Q Consensus 166 ---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (396)
||..|++.++..++..+..++..||++++++++ + +++++ .++++++ ++++|.
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-----------~-----~~~~~---~~~~~~~----~~~~~~~~ 209 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP-----------K-----PLTQA---VLKPIRE----FFQRKNMI 209 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc-----------h-----hHHHH---HHHHHHH----HHHhcCch
Confidence 999999988877776555544567643321100 0 00000 0012222 223333
Q ss_pred -HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHH-HHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 241 -FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGI-AGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
++...+..++....++....+.|.|+++ +|+++.+.+......+. ..+++. ++++++.||+|+|+.+..+.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 5556666666677777888899999988 79999998888877764 566777 7788999999999998888887777
Q ss_pred HHHHHHHh-----------hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH
Q 016048 319 HMFLYSVA-----------WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS 374 (396)
Q Consensus 319 ~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 374 (396)
....+.+. .+.+.... .++.+++.+...+...++..|.+|+++||+.+|+.+...+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 288 TNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 76655443 12232332 3344777888999999999999999999999999887654
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=263.06 Aligned_cols=360 Identities=11% Similarity=0.057 Sum_probs=261.2
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+++.+..++...++..++.++....++.+...... ...-..+....++..+++.+.+++++++.|+++||+|||+++.
T Consensus 9 ~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~ 86 (1140)
T PRK06814 9 KSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLS--GALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAK 86 (1140)
T ss_pred hccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHH
Confidence 34566677788888888766554443333222111 1111223356789999999999999999999999999999864
Q ss_pred H---HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 83 V---PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 83 ~---~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
. ..+......+.....++ ++.++++|+++|+ +.+...|+..+++.|++|+++|++++++.+.+.++|.++||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi-~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~ 162 (1140)
T PRK06814 87 ILKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGI-HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTI 162 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH-HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHH
Confidence 3 22222222233334467 9999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 160 SARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 160 ~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
+++++ +|++.|....+..++ .++..+.+|++++.++..+. . .+......+.++.+
T Consensus 163 l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~ 221 (1140)
T PRK06814 163 IGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAAPDLKI-D-------------------RNIIRSTITLLKYA 221 (1140)
T ss_pred HHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCCCCCee-c-------------------cchHHHHHHHHHHH
Confidence 99986 788888444444443 44445667766443221000 0 00000112234445
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHH
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLF 315 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 315 (396)
++++.++...+..++..+.......++|.|+++.+|.++...+.+.+..+++.+++. +..+++.|+..+++.+..+.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 222 KADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHHHHH
Confidence 578888888887777777777788899999999999999999999999999999999 6778898887766665555555
Q ss_pred HHHHHHHHHHh--------------------hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH
Q 016048 316 GCVHMFLYSVA--------------------WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS 374 (396)
Q Consensus 316 ~~i~~~~~~~~--------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 374 (396)
.+++.+.+.+. .+.+...+ .++++++.+...+...+++++.+|++++|+++|+.+++..
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 54444433332 22333333 4556777888888899999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhc
Q 016048 375 FANLVSPLAFSPLTGD 390 (396)
Q Consensus 375 ~g~~~~~~~~g~l~~~ 390 (396)
++..+++.+.|.+.+.
T Consensus 381 ~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 381 AFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=2.8e-29 Score=231.46 Aligned_cols=358 Identities=12% Similarity=0.057 Sum_probs=253.1
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.++.+....++.+.+.+...|.+|.+..+ +++.+..+.|++.+++.++..+++++.|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-------VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 456777788899999999999999999765 3567788999999999999999999999999999999999987
Q ss_pred HHHhHHHHHHH---HhccC--chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 85 ITLSIIPLAIL---AYSRS--RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 85 ~~~~~~~~~~~---~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
....+++.... .+.+. ........+.+++.|+ +.+...+....+..|..+ ++++.++......++|..+||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGF-VFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 76665544322 22221 0113445677888998 778778888888877543 3455677788888999999999
Q ss_pred HHHHh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhc
Q 016048 160 SARFI---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLK 236 (396)
Q Consensus 160 ~~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
+++.+ +||..|++.+++.++..++.+...||+++++++++ ..+.++++.+.++..+.+
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l- 212 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVAN------------------ALGANASAFSLKLALELF- 212 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhc------------------ccccccCCCCHHHHHHHH-
Confidence 98865 89999999988888776655444444432211000 000001112233333334
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKF---HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGL 313 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 313 (396)
++|.++...+..++....+.....+.+.|+++.+ +.+....+...+...+...++. ...+++.||+++|+.+..+.
T Consensus 213 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l~~~~ 291 (396)
T TIGR00882 213 RQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNALLIAG 291 (396)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHH
Confidence 4566655555555555555555566788877654 4455567888888888888888 67789999999999999888
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhh-HHHHHHHHHHhhhhhhhhhhhcc
Q 016048 314 LFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC-ISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 314 ~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.++...+.....+.+.... ..+.+.+..........+..+..|++.++++.+. .+....+|+.++|.+.|++.|..
T Consensus 292 ~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 292 TIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 888887777666555544433 3333444444444555667777888888888776 67888999999999999999975
Q ss_pred c
Q 016048 392 R 392 (396)
Q Consensus 392 ~ 392 (396)
+
T Consensus 372 G 372 (396)
T TIGR00882 372 G 372 (396)
T ss_pred c
Confidence 3
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=6.8e-29 Score=233.62 Aligned_cols=353 Identities=13% Similarity=0.105 Sum_probs=252.7
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-----CCc
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-----GRK 78 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk 78 (396)
+|+...++...+..++......+.+|.+..+ .+.+..+.|.. +...... ++.+++|+++||+ |||
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~--------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grr 80 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTV--------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRR 80 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCc
Confidence 4556677777888888888999999999555 35666677775 3333333 5889999999999 999
Q ss_pred hh-hhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 79 AL-LTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 79 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
|. +..+.+..+++...+++.+...+++.+.+.+++.++ +.+...+...+++.|++|+|+|+++.++...+..+|.+++
T Consensus 81 r~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~-~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 81 RGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAF-CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHH
Confidence 86 557777777787777776443348889999999999 8888889999999999999999999999999999999998
Q ss_pred HHHHHH-----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHh
Q 016048 158 TISARF-----ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV 232 (396)
Q Consensus 158 ~~~~~~-----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
+.++.. .+||..|++.+++.++..+.. +..||+++++++++ + .+ ++...++++.
T Consensus 160 ~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~~~~~~~------------~----~~---~~~~~~l~~~- 218 (491)
T PRK11010 160 GGLALWLADRYLGWQGMYWLMAALLIPCIIAT-LLAPEPTDTIPVPK------------T----LE---QAVVAPLRDF- 218 (491)
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccccccc------------c----hh---hhHHHHHHHH-
Confidence 866654 379999999988777665544 45787643211000 0 00 0000123332
Q ss_pred hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHH
Q 016048 233 HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMV-IAGIAGTISQLIMMPVLAPTVGEARLLSF 311 (396)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 311 (396)
+ +++..+......++..........+.+.|+.+.+|+++.+.+.... ...++.+++. ++.|++.||+++|+.+..
T Consensus 219 --~-~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~~l~i 294 (491)
T PRK11010 219 --F-GRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFRALMI 294 (491)
T ss_pred --H-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHH
Confidence 2 3444554444445555555566677888887778999999999875 4456788888 788999999999887776
Q ss_pred HHHHHHHHHHHH---HHhh-hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhh
Q 016048 312 GLLFGCVHMFLY---SVAW-SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSP 386 (396)
Q Consensus 312 ~~~~~~i~~~~~---~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 386 (396)
+..+..+..+.+ .... +.+.... ..+..+..+...+...++..+..+++.+++.+|+.+....+|..+++.+.|.
T Consensus 295 ~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~ 374 (491)
T PRK11010 295 FGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGW 374 (491)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655544443322 2221 2222221 2232334455567778889999999999999999999999999999999999
Q ss_pred hhhccc
Q 016048 387 LTGDCR 392 (396)
Q Consensus 387 l~~~~~ 392 (396)
+.|..+
T Consensus 375 l~~~~G 380 (491)
T PRK11010 375 FVEAHG 380 (491)
T ss_pred HHHHhC
Confidence 999653
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=1.9e-29 Score=262.48 Aligned_cols=359 Identities=16% Similarity=0.130 Sum_probs=263.2
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+.+.+..+++..++..++.......+..++.... +...+....+++.+++.++..++++++|+++||+|||++++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY-----DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc-----CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 3445666677777766665444333333333321 22334567899999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHH---hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 83 VPITLSIIPLAILA---YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 83 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
.+.++..+..++.. .+++ ++.++++|+++|+ +.+...+...+++.|++|+++|++++++.+.+.++|.++|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGA-QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 98877666655544 3456 8999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHhh-------------hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCC
Q 016048 160 SARFIS-------------TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLP 226 (396)
Q Consensus 160 ~~~~~~-------------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (396)
+++++. |++.+.+..+...+..++..+.+||+++.....+ + . .......
T Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~---------~~~~~~~ 219 (1146)
T PRK08633 158 LFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF--D-------K---------KKYLFPK 219 (1146)
T ss_pred HHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc--c-------c---------cccccHH
Confidence 988752 2333333333333333344456777654432110 0 0 0000000
Q ss_pred ChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccc-chhhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 016048 227 SIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKN-QFADLMVIAGIAGTISQLIMMPVLAPTVGE 305 (396)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 305 (396)
..++.++.+++++.++...+..++..........++|.|+.+.+|++.. ..+++.+...++.+++. ++.+++.||+++
T Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~r~~~ 298 (1146)
T PRK08633 220 LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSGRHIE 298 (1146)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhCCceE
Confidence 1122233344677777766666666666666778899999998999998 88999999999999999 777899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhh
Q 016048 306 ARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAF 384 (396)
Q Consensus 306 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 384 (396)
++.+.++.++.+++.+++.+..+.+...+ .++++++.+...+...+++.+..|+++||+++|+.+.+..+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 299 LGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888777777776655444433 55567777778888899999999999999999999999999998888777
Q ss_pred hhhhh
Q 016048 385 SPLTG 389 (396)
Q Consensus 385 g~l~~ 389 (396)
+.+..
T Consensus 379 ~~l~~ 383 (1146)
T PRK08633 379 TLFSG 383 (1146)
T ss_pred HHHHH
Confidence 66543
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=1.4e-28 Score=227.34 Aligned_cols=343 Identities=12% Similarity=0.073 Sum_probs=250.5
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCC-chhhhHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGR-KALLTVPIT 86 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~~~~~~~ 86 (396)
..+....++.+..+++..|.++.+..+ +++.+..+.|++.+++.++.+++++++|+++||+|| |+++.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~ 77 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSK-------TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHF 77 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 456778888999999999999999765 457888899999999999999999999999999965 778888888
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHh--------cCCCcccchhHHHHHHHhhhhhhHHHH
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVA--------DNVPPGRRASVFGIFSGIVSGAFVCGT 158 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~ 158 (396)
+..++..+..+.++ ++.+++.|++.|+ +.+...+...++.. |..++..|.+..| .+|..+||
T Consensus 78 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~ 147 (418)
T TIGR00889 78 AGALLLFFAAQVTT---PAGMFPVLLANSL-AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAM 147 (418)
T ss_pred HHHHHHHHHHHhcC---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHH
Confidence 88888888888888 8889999999998 76666666555432 3333344555544 46788888
Q ss_pred HHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 159 ISARFIST---SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 159 ~~~~~~~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
.+++.++. +.+|++.+++.++..++ .+.+||+|+++++++ . +.++ ..+.+.++ +
T Consensus 148 ~l~g~l~~~~~~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~-------------~---~~~~--~~~~~~~~----~ 204 (418)
T TIGR00889 148 WAVSLLDIELSNIQLYITAGSSALLGVF-ALTLPDIPVAKSTAK-------------M---SIKV--MLGLDAFI----L 204 (418)
T ss_pred HHHHHhcccchhHHHHHHHHHHHHHHHH-HhcCCCCCCCccccc-------------c---CHHH--HhhhhHHH----H
Confidence 88876632 33567777666665544 467788754322100 0 0000 00011222 2
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccc--------cchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNK--------NQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR 307 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 307 (396)
.|+|.++...+..++..........+.+.|.++. |.++ +..+...+...+..+++. +..+++.||+|+|+
T Consensus 205 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g~r~ 282 (418)
T TIGR00889 205 FKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFGIKK 282 (418)
T ss_pred hcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHH
Confidence 3566666666666666555555667778887664 5443 566888898999999998 77789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-h---hHHH-HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHH-HHHHHHHHhhh
Q 016048 308 LLSFGLLFGCVHMFLYSVAWS-S---WVPY-AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCIS-GICSFANLVSP 381 (396)
Q Consensus 308 ~~~~~~~~~~i~~~~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~ 381 (396)
++..+.++..++..++..... . +... ..++.+++.+...+....++.|.+|+++|++++|+.+ ....+|..++|
T Consensus 283 ~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp 362 (418)
T TIGR00889 283 VMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGY 362 (418)
T ss_pred HHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999988888766665322 1 2222 2445567777778888899999999999999999997 56789999999
Q ss_pred hhhhhhhhccc
Q 016048 382 LAFSPLTGDCR 392 (396)
Q Consensus 382 ~~~g~l~~~~~ 392 (396)
.+.|.++|+.+
T Consensus 363 ~l~G~l~~~~g 373 (418)
T TIGR00889 363 ILSGVMVEKMF 373 (418)
T ss_pred HHHHHHHHHhc
Confidence 99999999864
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=2.1e-27 Score=219.30 Aligned_cols=343 Identities=15% Similarity=0.103 Sum_probs=237.2
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-----CCch-hhhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-----GRKA-LLTV 83 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~-~~~~ 83 (396)
++...+..++..+...+.+|.++++ .+.+..++|++..+... .+..+++|+++||+ |||| .+..
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~--------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~ 73 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV--------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLL 73 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHH
Confidence 3445666777788888999999665 37888899999777775 68899999999999 8876 6888
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF 163 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 163 (396)
+.++.+++....++.+...+++.+++..++.+. ..+...+...+++.|+.|+|+|+++.++...+.++|.++++.++..
T Consensus 74 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 74 TQVGLAASIAAMAFCPPHAALWPLAGLAVLVAF-LSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 888888888888887443337778888888887 7788889999999999999999999999999999999998876654
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 164 -----ISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 164 -----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
.+||..|++.++..++..+. .+..||+++++++++ +.++ +.++.++.+.++
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~----------------~~~~-------~~~~~~~~l~~~ 208 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPR----------------SLGE-------AVVGPLRDFFSR 208 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccc----------------hhHH-------HHHHHHHHHHhC
Confidence 38999999988877665443 456777654322100 0000 011112223367
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHH-HHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGI-AGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
|.++..++..++..........+.+.++.+.+|+++.+.+......+. +.+++. .+.+++.||+++|+.+..+..+..
T Consensus 209 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~~~~~ 287 (402)
T PRK11902 209 RGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFGVLQA 287 (402)
T ss_pred cCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHH
Confidence 777766666555554433333455566777779999999988866554 467777 778899999999988777666655
Q ss_pred HHHHHH---HHhh-hhhHHHHH-HH----HHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 318 VHMFLY---SVAW-SSWVPYAA-AV----FSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 318 i~~~~~---~~~~-~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
+..+.+ .... +.+..... .+ .+...+...+....++++..| ++..+..+....++...++.+.|.+.
T Consensus 288 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G~l~ 363 (402)
T PRK11902 288 VSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASVGRVYVGPTSGYLV 363 (402)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554333 2322 22322222 12 123334444555555555555 44556666666778877777899999
Q ss_pred hccc
Q 016048 389 GDCR 392 (396)
Q Consensus 389 ~~~~ 392 (396)
|+.+
T Consensus 364 ~~~G 367 (402)
T PRK11902 364 EAYG 367 (402)
T ss_pred HHhC
Confidence 8765
No 80
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.1e-29 Score=216.11 Aligned_cols=353 Identities=17% Similarity=0.148 Sum_probs=273.0
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccC------------------------------------------CCCCcch
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVC------------------------------------------PGRDECS 44 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------------------~~~~~~~ 44 (396)
+..+.+..+++.+-...+.|.+|.|..|..+ ....+.+
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 3456788889999999999999999988542 0123455
Q ss_pred hHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhH
Q 016048 45 LAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHC 124 (396)
Q Consensus 45 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 124 (396)
...+++|++.+.+.+.+++.+++.|.+.||+|+|-.++++.++...++++.++..+ ++.+++.|.+||+ |.+...+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgv-gsA~~~t 178 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGV-GSAFADT 178 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhh-hHHHHHh
Confidence 66789999999999999999999999999999999999999999999999999999 9999999999999 9999999
Q ss_pred HHHHHHhcCCCccc-chhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc
Q 016048 125 LSLAYVADNVPPGR-RASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYT 199 (396)
Q Consensus 125 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 199 (396)
+..++++|.+|+|+ |++++|+...+.++|.++||.+|+.+ |.+.+|.+.+++.++...+-++.++.+..+++
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--- 255 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--- 255 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc---
Confidence 99999999999765 79999999999999999999999986 88999999999999988877565554332221
Q ss_pred ccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhh
Q 016048 200 PILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFAD 279 (396)
Q Consensus 200 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 279 (396)
..++..++++++ ++|.++.........+.........++.+..|.+..+.-+.|.
T Consensus 256 ---------------------~~~~~~~~~~Ll----~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~ 310 (464)
T KOG3764|consen 256 ---------------------STEQGTPMWSLL----MDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGL 310 (464)
T ss_pred ---------------------ccccCccHHHHH----hCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceee
Confidence 122233455544 5777776666666666666777788888888888855558899
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcchh--HHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhc
Q 016048 280 LMVIAGIAGTISQLIMMPVLAPTVGEAR--LLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQ 356 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 356 (396)
.+....+...++. .+.+.+.||++..+ ....+.+..++......+..+....++ ...++++.+.............
T Consensus 311 ~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~l 389 (464)
T KOG3764|consen 311 AFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYL 389 (464)
T ss_pred eecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHh
Confidence 9999999999999 66679999999433 344445555555555555555444333 3333444444443333333333
Q ss_pred cCC---c---cchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 357 VAS---N---EQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 357 ~p~---~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
++. + .-|...++......+|.++||.++|.+.+..+
T Consensus 390 vd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 390 VDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred cchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 332 3 56899999999999999999999999987653
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=4.9e-27 Score=219.98 Aligned_cols=373 Identities=12% Similarity=0.064 Sum_probs=262.3
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc-cCCchhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK-YGRKALL 81 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~ 81 (396)
+++.++.+++..+...++.+...+.+|.|+.+. .+++.+..+.|++.+.+.++..++++++|+++|| +|||+++
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 445677888889999999999999999997652 1367888899999999999999999999999999 8999999
Q ss_pred hHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCccc---chhHHHHHHHhhhhhhHHHH
Q 016048 82 TVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGR---RASVFGIFSGIVSGAFVCGT 158 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~ 158 (396)
.++.++.+++.++.+++++ ++.++++|.+.|+ +.+...+...++++|++|+++ |+++++++....++|..+||
T Consensus 83 ~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~-g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAV-GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred HHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 9999999999999999888 7888899999999 888889999999999998764 88899999999999999999
Q ss_pred HHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cccccccchhhhhhh------------------hhhh
Q 016048 159 ISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDED-LYTPILSSKAEISAS------------------CEES 215 (396)
Q Consensus 159 ~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~l~~~~~~~~~~------------------~~~~ 215 (396)
.+++.+ +||+.|.+.++..++..+ .+...++..++.+ +++..++.+.+.... .+..
T Consensus 159 ~l~g~l~~~~g~~~~f~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (475)
T TIGR00924 159 LLAGVIAENYGYHVGFNLAAVGMVIGLL-TFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVV 237 (475)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHH-HHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 998875 899999988765544433 3333332211100 000000000000000 0000
Q ss_pred hh---------------hhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc----
Q 016048 216 TK---------------KLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQ---- 276 (396)
Q Consensus 216 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---- 276 (396)
.. .....+++.+..+ -+|.+.+..+++...+....+....+.++.+.++..+.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip 313 (475)
T TIGR00924 238 IANILLMTVTLAVIIFFFRLAFKPRLDAVA----RNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVP 313 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHH----HhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEEC
Confidence 00 0000000001111 001123344455555666666677777888877754444222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhcc-----hhHH--HHHHHHHHHHHHHHHHh---------hhhhH-HHHHHHHH
Q 016048 277 FADLMVIAGIAGTISQLIMMPVLAPTVGE-----ARLL--SFGLLFGCVHMFLYSVA---------WSSWV-PYAAAVFS 339 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-----~~~~--~~~~~~~~i~~~~~~~~---------~~~~~-~~~~~~~~ 339 (396)
.+++.+.+++..++.+.++. ++..|.+| +... ..|.++.++++..+... .+.+. ....++++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~-~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~ 392 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLA-MIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQT 392 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHH-HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 67888889999888884443 33333332 3333 67788888887776641 23333 33367779
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++.....|...+++.+..|++.||+++|+......+|..+++.+.+...+.
T Consensus 393 ~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 393 LGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999998888766543
No 82
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=2.6e-27 Score=221.50 Aligned_cols=344 Identities=14% Similarity=0.099 Sum_probs=252.2
Q ss_pred HHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc----cCCch-hhhHHHHHhHH
Q 016048 16 VHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK----YGRKA-LLTVPITLSII 90 (396)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~-~~~~~~~~~~~ 90 (396)
......++..+.++.+..+ +++++..+.|++.++..+..++..|+.|+++|| +|||| .++.+....++
T Consensus 10 ~~~~~~~~~~~~l~~~~~~-------~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i 82 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTD-------VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSI 82 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHH
Confidence 3444555666666666554 567888999999999999999999999999997 67755 56678888888
Q ss_pred HHHHHHhccCch---hHHHHHHHHHHHhhhccchhhHHHHHHHhcCC-CcccchhHHHHHHHhhhhhhHHHHHHHH----
Q 016048 91 PLAILAYSRSRN---FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV-PPGRRASVFGIFSGIVSGAFVCGTISAR---- 162 (396)
Q Consensus 91 ~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~---- 162 (396)
+.+++...++.+ ....+++.+++.++ +.+...+...++..|.. ++++|++..++.+....+|..+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~ 161 (437)
T TIGR00792 83 VLVLLFTTPDFSATGKLVYAYITYILLGL-FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVS 161 (437)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887766421 24567778888888 76776677788889987 4688999999988888887665543322
Q ss_pred -------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 163 -------FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 163 -------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
..+||+.+.+.+++.++..++.++..||+++++++ +++++.+.++.++.+
T Consensus 162 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~-----------------------~~~~~~~~~~~~~~l 218 (437)
T TIGR00792 162 YFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPK-----------------------NIEKKLSLKQIFKAL 218 (437)
T ss_pred HhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCc-----------------------ccccCCCHHHHHHHH
Confidence 23689999988888887777666677775422110 001112345555555
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHH
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLF 315 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 315 (396)
.++|.++...+..++..........+.+.|.++.++ ++...+.+.....+..+++. ++.+++.||+|+|+.+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~~~~~~ 296 (437)
T TIGR00792 219 FKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFAGGILL 296 (437)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHH
Confidence 678888887777777777666666666666665555 45556677777788888888 6778999999999999998888
Q ss_pred HHHHHHHHHHhh-hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccC-------CccchhHhhhHHHHHHHHHHhhhhhhhh
Q 016048 316 GCVHMFLYSVAW-SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVA-------SNEQGKAQGCISGICSFANLVSPLAFSP 386 (396)
Q Consensus 316 ~~i~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 386 (396)
.+++.+.+.+.. +.+.... ..+.+++.+...+..+++.+|..| ++++|.++|+.+....+|..+++.+.|.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 297 MVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777666543 2222222 445567777888888999888875 4568999999999999999999999999
Q ss_pred hhhccc
Q 016048 387 LTGDCR 392 (396)
Q Consensus 387 l~~~~~ 392 (396)
+.+..+
T Consensus 377 ll~~~G 382 (437)
T TIGR00792 377 ILGIIG 382 (437)
T ss_pred HHHHcC
Confidence 998754
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=6.5e-27 Score=202.29 Aligned_cols=349 Identities=14% Similarity=0.140 Sum_probs=285.2
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
+..+....++.++......+.+|.+ ++.++++..+.+++..+++.++.+++++.|++.+|+|+|+.+++++.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l--------~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~ 86 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHL--------KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLL 86 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHH--------HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHH
Confidence 3344556667777788888998888 66788999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
++++++.+..-+.+...+..++++-++.|. |.+...+....+++...|+++..+.+.+.+...++|.++||++++.+
T Consensus 87 l~avg~~lF~pAa~~~~y~~FL~~lFila~-Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 87 LYAVGAALFWPAASSKSYGFFLVALFILAS-GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHHHHh-hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999998644444448999999999999 99999999999999999999999999999999999999999998764
Q ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHH-HhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhh
Q 016048 165 ---------------------STSAAFQAATAGSIISAVYMR-IFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVF 222 (396)
Q Consensus 165 ---------------------~~~~~f~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (396)
.++++|...+...++..+... ...||.++.++ ++.+
T Consensus 166 s~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~----------------------~~~~ 223 (422)
T COG0738 166 SGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAP----------------------SLGA 223 (422)
T ss_pred hhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccc----------------------cccc
Confidence 146677776666655544331 12233222111 0001
Q ss_pred ccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 223 KRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT 302 (396)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (396)
+++....+ +.++|+++...+..+++........++++.|+.+..|.+..+.+...+....+.++|+ +++.++.+|
T Consensus 224 ~~~~~~~~----l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig~~lm~~ 298 (422)
T COG0738 224 SGSAGLSS----LFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIGSALMSR 298 (422)
T ss_pred cccchHHH----HHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 11112333 3378999999999999999999999999999999779999999999999999999999 777788889
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhh
Q 016048 303 VGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPL 382 (396)
Q Consensus 303 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 382 (396)
+...|.+.....+..+.++...+.++....+...+++.+.+..+|..++...+..| ++...+.+ .-.+.-.|+++.|.
T Consensus 299 ~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~-~l~maivGGAiiP~ 376 (422)
T COG0738 299 IKPEKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG-LLVMAIVGGAIIPP 376 (422)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce-eeeeheecchHHHH
Confidence 99999999988888888888888888877888888999999999999999999999 55555544 44566789999999
Q ss_pred hhhhhhhcccC
Q 016048 383 AFSPLTGDCRF 393 (396)
Q Consensus 383 ~~g~l~~~~~~ 393 (396)
+.|++.|..+.
T Consensus 377 l~G~i~d~~g~ 387 (422)
T COG0738 377 LQGVIADMFGI 387 (422)
T ss_pred HHHHHHHhhhh
Confidence 99999998754
No 84
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=4.1e-28 Score=233.29 Aligned_cols=366 Identities=14% Similarity=0.204 Sum_probs=257.9
Q ss_pred HHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHH
Q 016048 13 TIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPL 92 (396)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~ 92 (396)
..+...+..+...+.++.+ ++++++++.+.|++.+.+.++++++.++.|+++||+||||.+.++.++.+++.
T Consensus 41 ~~~~~~~~~g~~~~~l~~i--------ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTI--------ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhh--------hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 3444444556666777666 66788899999999999999999999999999999999999999999999999
Q ss_pred HHHHhcc----------------------------C--------------------chhHHHHHHHHHHHhhhccchhhH
Q 016048 93 AILAYSR----------------------------S--------------------RNFFYAYYVLRTLTAMVCEGSIHC 124 (396)
Q Consensus 93 ~~~~~~~----------------------------~--------------------~~~~~~l~~~r~l~G~~~~~~~~~ 124 (396)
+++++.+ + ...+..++++|+++|+ +.+...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~Gi-G~~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGI-GATPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhc-cCCcchh
Confidence 9988753 0 0025677899999999 9999999
Q ss_pred HHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--------------------------hhHHHHHHHHHHHH
Q 016048 125 LSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--------------------------STSAAFQAATAGSI 178 (396)
Q Consensus 125 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--------------------------~~~~~f~~~~~~~~ 178 (396)
...+++.|++|+++|+++++++.....+|..+|+++++.+ .||..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888753 16667888888777
Q ss_pred HHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhh
Q 016048 179 ISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGL 258 (396)
Q Consensus 179 ~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (396)
+..+.. +.+|++.+++++++..+..+++..++ .+.+...+..+...+..+..+.+.++|.++...+..++.....+++
T Consensus 272 l~~v~l-~~~p~~lp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~ 349 (633)
T TIGR00805 272 LTSIPF-FFFPKALPKEGKRVNVDVHETEKLEK-SEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGY 349 (633)
T ss_pred HHHHHH-HhCccccCCcccccchhhhhhhcccc-cccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 766544 55665533221100000000000000 0000000000000111122233447888998888888888899999
Q ss_pred hhhHHHHhhhhccccccchhhHHHHHHH-HHHHHHHHHHHhhhhhhc--chhHHHHHHHHHHHHHHHHHH----------
Q 016048 259 QGSMMYYLKAKFHFNKNQFADLMVIAGI-AGTISQLIMMPVLAPTVG--EARLLSFGLLFGCVHMFLYSV---------- 325 (396)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~~---------- 325 (396)
..++|.|+++.+|+++.+++.+.....+ +.+++. +++|++.||++ .|+.+..+..+..++.+....
T Consensus 350 ~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 428 (633)
T TIGR00805 350 ITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAP 428 (633)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCc
Confidence 9999999999999999999999887776 456666 78899999987 456666666666665443220
Q ss_pred -----------------hhh--------h---------------------------------------------------
Q 016048 326 -----------------AWS--------S--------------------------------------------------- 329 (396)
Q Consensus 326 -----------------~~~--------~--------------------------------------------------- 329 (396)
... .
T Consensus 429 ~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g 508 (633)
T TIGR00805 429 VAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKG 508 (633)
T ss_pred cceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCC
Confidence 000 0
Q ss_pred -------hHHHH---HH-HHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHHhhhhhhhhhhhc
Q 016048 330 -------WVPYA---AA-VFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FANLVSPLAFSPLTGD 390 (396)
Q Consensus 330 -------~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~ 390 (396)
..... .+ +..+............+-+.+|+++|+-+.|+...+.+ +|.+-+|+++|+++|.
T Consensus 509 ~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 509 LCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDV 581 (633)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhc
Confidence 00000 11 11122223344555667788999999999999988876 8889999999999996
No 85
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.2e-26 Score=218.31 Aligned_cols=335 Identities=19% Similarity=0.187 Sum_probs=239.5
Q ss_pred HHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHH
Q 016048 48 YLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSL 127 (396)
Q Consensus 48 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 127 (396)
.+.+++.+...++.++++++.|+++|++|||+.++++.+.+.++.+++++++| +++++++|++.|+ |.|......+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~---~~~l~~GR~l~G~-g~G~~~~~~p 164 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS---WYQLIVGRILTGL-GVGGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhcc-chhhhhhcch
Confidence 56799999999999999999999999999999999999999999999999999 9999999999999 9999999999
Q ss_pred HHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc------
Q 016048 128 AYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLPESVRDED------ 196 (396)
Q Consensus 128 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~------ 196 (396)
.+++|..|++.||...+..+....+|..++..++... +||..+.+..+.+++..+. .+++||+|+.--
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChH
Confidence 9999999999999999999999999999998877776 6999999999888888777 789999997321
Q ss_pred -cccccccchh-hhhhhhh---hhh-hh--hh-hhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhh
Q 016048 197 -LYTPILSSKA-EISASCE---EST-KK--LQ-VFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLK 267 (396)
Q Consensus 197 -~~~~l~~~~~-~~~~~~~---~~~-~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (396)
.++.+++.+. ++++.+. +.. +. +. ..+.+..+++.++...+++......+..+.+.........+.+.+++
T Consensus 244 ~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 244 EAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 1222222222 1111111 111 00 00 01111124444421111122222233333333333444555566655
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhh------------hHHHH-
Q 016048 268 AKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSS------------WVPYA- 334 (396)
Q Consensus 268 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~------------~~~~~- 334 (396)
.. |.+... .......++...++. .++.++.||+|||+.+..+...+.+++++++..... +..+.
T Consensus 324 ~~-g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
T KOG0254|consen 324 SA-GLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVF 400 (513)
T ss_pred hc-CCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHH
Confidence 43 665443 455566777777777 555799999999999999999999998888754321 11111
Q ss_pred H-HHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 335 A-AVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 335 ~-~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
. +.......+..|..+.+.+|.+|.+.|+++.++....++..+.+-......+.+.
T Consensus 401 ~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~ 457 (513)
T KOG0254|consen 401 LCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA 457 (513)
T ss_pred HHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 2223334455677788999999999999999999999998887766555554443
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=1e-25 Score=207.24 Aligned_cols=348 Identities=14% Similarity=0.078 Sum_probs=240.1
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHH--HHHHhHHHHhhhhccc-ccccccCCchhhhH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQ--QAIIGLGTLVMMPLVG-NLSDKYGRKALLTV 83 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~~~~~~~G-~l~Dr~Grk~~~~~ 83 (396)
+..+....+..++..++..|.+|.+.+| .+.+..+.|+. .+...+...+.+|+++ +.+||+||||.+++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~--------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE--------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 3456667788888889999999999655 36778899997 4677888888999994 47999999999766
Q ss_pred HHHHh-HHHHHHHH-hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH
Q 016048 84 PITLS-IIPLAILA-YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA 161 (396)
Q Consensus 84 ~~~~~-~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 161 (396)
...+. .......+ +........+++..-.+.++ ..+...+...++..|..++++++...+....+..+|.++|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASL-ASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 55332 22222222 21121113344445555555 66677778888889999888888888888888888999888654
Q ss_pred H----HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC
Q 016048 162 R----FISTSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKS 237 (396)
Q Consensus 162 ~----~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
+ ..+||..|++.+++.++..+..++..||+++++++ + ++ ..++..+.+ |
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-------------------~----~~---~~~~~~~~l-~ 206 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEA-------------------P----LA---RRASLFRFF-R 206 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-------------------c----hh---hHHHHHHHH-c
Confidence 4 45999999999988877666553433332211110 0 00 011222233 5
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHH-HHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAG-TISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
+|.++......++..........+.+.|++| .|+++++.+......+... +++. +..+++.||+|+|+.+..+..+.
T Consensus 207 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~~~ 284 (390)
T TIGR02718 207 RPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGC-GGGAWLVRRAGLWRTFILGVGLA 284 (390)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHH
Confidence 5667766667677777777778888999988 4999999999988877644 4555 77889999999999988777665
Q ss_pred HHHHHHHHHhh------hhhHHHHHHH-HHHhhhhhhhhhhHHHhhccCC-ccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 317 CVHMFLYSVAW------SSWVPYAAAV-FSILSVFSHPCLRTIVSKQVAS-NEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 317 ~i~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
.+......... .....+...+ .++..+...+...+...+..++ +++++.+++.+...++|..++|.+.|.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 285 GSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222111 1111122222 2345667777888887777776 88999999999999999999999999999
Q ss_pred hccc
Q 016048 389 GDCR 392 (396)
Q Consensus 389 ~~~~ 392 (396)
|+.+
T Consensus 365 ~~~G 368 (390)
T TIGR02718 365 DRFG 368 (390)
T ss_pred HHHc
Confidence 9764
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.5e-25 Score=188.74 Aligned_cols=342 Identities=16% Similarity=0.200 Sum_probs=275.1
Q ss_pred hHHHHHHHHHHhhc----cccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 8 SHLFITIFVHCFST----SMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 8 ~~l~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
+.+..+..+..++. ..+.|.++.+ ++|.++|.+..|+++++..+...+.+++..+++.|+|.++.+..
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~I--------r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~ 82 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEI--------RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFL 82 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHH--------HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHH
Confidence 44455555555554 4455666655 67889999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH--
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA-- 161 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-- 161 (396)
++++.+++.++-... + .+.++.+-.+.|. +.+......++++.+.+| |+-+..++++....++|..+++.++
T Consensus 83 ~Llli~~G~~iR~~~-~---~~~L~~gt~l~G~-gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavp 156 (395)
T COG2807 83 ALLLIAAGILIRSLG-G---LPLLFLGTLLAGA-GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVP 156 (395)
T ss_pred HHHHHHHHHHHHhcc-c---HHHHHHHHHHHHh-hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhH
Confidence 999999999999887 5 6889999999999 999999999999999998 7789999999998888777765544
Q ss_pred --HHh-hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 162 --RFI-STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 162 --~~~-~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
... +||....+-+.++++..+. ++|...+++.+ +.+++.++..+. .++
T Consensus 157 la~~~~gW~~aL~~WAl~allAl~~---WlPq~~r~~~~----------------------~~~~~~~~~~~v----w~~ 207 (395)
T COG2807 157 LAQHSGGWRGALGFWALLALLALLI---WLPQALREQAA----------------------SIATKLVSVRKV----WRS 207 (395)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHH---Hhhhccccccc----------------------cccccccccccc----ccC
Confidence 444 7999988888888776653 34543222110 011111122222 267
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-GEARLLSFGLLFGC 317 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~ 317 (396)
|.-|...+...++++.+|....|+|.++.|+ |+|+.++|.+.+...+.+++.. +..+.+.+|. ++|+.......++.
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~~~~l 285 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLALLLML 285 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHH
Confidence 8888899999999999999999999999997 9999999999999999999999 8889999975 56777777778888
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccC-CccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 318 VHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVA-SNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 318 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
++..-+.+.+........+++|++.+.++|.....+.+..+ +++.++-+|+.+.++++-...||.++|++.|..++-
T Consensus 286 ~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 286 VGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 88887777665444444688899999999999988877764 456788899999999999999999999999988763
No 88
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=9.7e-27 Score=214.08 Aligned_cols=333 Identities=15% Similarity=0.079 Sum_probs=249.2
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhcc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCE 119 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 119 (396)
.+|.+....+.+.+.+++++++++++++.|.+.||++-.+.+....+++++..++....+| ++.+++.|++.|+ .+
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl-~e 148 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGL-FE 148 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH-Hh
Confidence 5677788889999999999999999999999999999999999999999988888888888 9999999999999 99
Q ss_pred chhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHhcC
Q 016048 120 GSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----------STSAAFQAATAGSIISAVYMRIFLP 189 (396)
Q Consensus 120 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----------~~~~~f~~~~~~~~~~~~~~~~~~~ 189 (396)
+..+|....+++.|+.+++|+..++++.+..++|.++|++++..+ +|||.|++.+++.++..++.++++|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 999999999999999999999999999999999999999998762 8999999999999999999989999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh
Q 016048 190 ESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK 269 (396)
Q Consensus 190 e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
+.|.+.+ .+++.+.....++.+ ++..+..+++.++++..+.+ +++.++...++.++.....+++.+++|.|+++.
T Consensus 229 ~~P~~~~---fl~~~ek~~~~~~~~-~~~~~~~~~~~~~~~~~~a~-~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~ 303 (495)
T KOG2533|consen 229 DNPSKAW---FLTDEEKELVVERLR-ESPSGGIENKFKWKGFKEAL-KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN 303 (495)
T ss_pred CChhhcc---ccchHHHHHHHHHHH-hccCCCcccccCHHHHHHHH-hchhHHHHHHHHHHHhhccccHHHHHHHHHHcC
Confidence 9887542 000000000000000 00001111113455555444 689999999999999999999999999999996
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHhhhhh----hcchhHHHHHHHH-HHHHHHHHHHhhhhhHHHH-HHHHHHhhh
Q 016048 270 FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT----VGEARLLSFGLLF-GCVHMFLYSVAWSSWVPYA-AAVFSILSV 343 (396)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 343 (396)
.|++..+++.+.....++++++. +++++++|| ..+|........+ ..++...+........... ......+..
T Consensus 304 ~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~ 382 (495)
T KOG2533|consen 304 GGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLI 382 (495)
T ss_pred CCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhH
Confidence 67999999999999999999999 778899999 4455554444433 3344344444432333333 233344456
Q ss_pred hhhhhhhHHHhhccCCccchhH-hhhHHHHHHHHHHhhhh
Q 016048 344 FSHPCLRTIVSKQVASNEQGKA-QGCISGICSFANLVSPL 382 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~-~g~~~~~~~~g~~~~~~ 382 (396)
...+......++....+.|... .+........++.++|.
T Consensus 383 ~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 383 ATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred HHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhh
Confidence 6677788888888765554443 33333334444444443
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.2e-25 Score=208.82 Aligned_cols=366 Identities=12% Similarity=0.074 Sum_probs=245.3
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc-cCCchhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK-YGRKALL 81 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~ 81 (396)
+++.++.++...+...++++...+.++.|+.+ +++.+..+.+++.+.+.....+..+++|+++|| +||||++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~-------~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVK-------QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 45667777888888999999999999999766 356666778888898988888888999999999 9999999
Q ss_pred hHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcc--cchhHHHHHHHhhhhhhHHHHH
Q 016048 82 TVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPG--RRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
+.+.++++++.+.++++.+. ...++++|.++|+ +.|...|...+++.|.+|++ +|+++++++..+.++|..+||.
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~--~~ll~~~~~l~~i-g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLK--PDLIFIALGTIAV-GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHh-ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 99999999999999998762 2235589999999 99999999999999999877 4577899999999999999888
Q ss_pred HHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc----cc--ccccccch----------hhhh-hhhhhhhhh
Q 016048 160 SARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDE----DL--YTPILSSK----------AEIS-ASCEESTKK 218 (396)
Q Consensus 160 ~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~----~~--~~~l~~~~----------~~~~-~~~~~~~~~ 218 (396)
+++++ +||+.|++.++ ..+..++.+...++..++. ++ .|...... .... .+.......
T Consensus 162 l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (489)
T PRK10207 162 LAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANL 240 (489)
T ss_pred HHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 87765 89999998655 3333333333334322111 00 01000000 0000 000000000
Q ss_pred -------------hhhhccCCChhHHhhhhcCChhHHHHHH--HHHHHHHhhhhhhhhHHHHhhhhccccc----cchhh
Q 016048 219 -------------LQVFKRLPSIDDMVHLLKSSPTFSQAAI--VAFLSNLADAGLQGSMMYYLKAKFHFNK----NQFAD 279 (396)
Q Consensus 219 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~ 279 (396)
..++.+ .+ + .. |+|.+....+ ...+....+......++.|.++..+.+. -....
T Consensus 241 ~~~~~~~i~~~~f~~~~~~-~~--~---~~-r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~ 313 (489)
T PRK10207 241 VLIVLSIVVTIIFFREAFK-LD--K---TG-RNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVS 313 (489)
T ss_pred HHHHHHHHHHHHHHHHHhc-CC--H---HH-HHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHH
Confidence 000000 01 1 11 2343332222 2333444455555677777775333221 01244
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcchhH-------HHHHHHHHHHHHHHHH-----Hh-----hhhh-HHHHHHHHHHh
Q 016048 280 LMVIAGIAGTISQLIMMPVLAPTVGEARL-------LSFGLLFGCVHMFLYS-----VA-----WSSW-VPYAAAVFSIL 341 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-------~~~~~~~~~i~~~~~~-----~~-----~~~~-~~~~~~~~~~~ 341 (396)
+.+.+.+..++.. ++.+++.||+++|+. +..|.++.+++++.+. .. .+.+ ......+.+++
T Consensus 314 ~~~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G 392 (489)
T PRK10207 314 FQALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG 392 (489)
T ss_pred HHhHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 5555666666777 455789999988863 6677777777765432 11 1122 22235667899
Q ss_pred hhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 342 SVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 342 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
..+..|...+.+.+..|++.+|.++|+.+....+|+.++..+.+..
T Consensus 393 e~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 393 ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988777544
No 90
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=6.9e-32 Score=253.25 Aligned_cols=373 Identities=17% Similarity=0.221 Sum_probs=249.0
Q ss_pred HHHHHHHHhhccccccchhhhhhhc---cCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSA---VCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
.++.+..+++.....+..+...... ......+.+.+..+.++..+...++..+|+++.|.++||+|||+.+..+.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3444777777777666655554221 1111222333667889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcc---CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 88 SIIPLAILAYSR---SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 88 ~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
..++.++.++++ + ++.+.++|+++|+ +.|...+....++.|..|+++|++..++.+....+|.+++..++...
T Consensus 86 ~~i~~~~~~~~~~~~~---~~~~~~~R~~~G~-~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNN---FWMLLIGRFLIGF-GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred cccccccccccccccc---ccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 7 9999999999999 99999999999999999999999999999999999988887776533
Q ss_pred ----h---hHHHHHHHHHHHHHHHHHHHHhcCCCCCC-------cccccccccchhhhhhhhhhhh---hhhhhhccCCC
Q 016048 165 ----S---TSAAFQAATAGSIISAVYMRIFLPESVRD-------EDLYTPILSSKAEISASCEEST---KKLQVFKRLPS 227 (396)
Q Consensus 165 ----~---~~~~f~~~~~~~~~~~~~~~~~~~e~~~~-------~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~ 227 (396)
+ ||..+.+..++.++..+. ..++||+|+. +++++.+++.++++.++++.++ +.++.++++.+
T Consensus 162 ~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T PF00083_consen 162 SYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKAS 240 (451)
T ss_pred cccccccccccccccccccccccccc-ccccccccceeccccccccccccccccccccccccccccccccccccccccee
Confidence 4 899998888888765554 4789999873 2223344442222111111111 11111111133
Q ss_pred hhHHhhhhcCChhHHHHHHHHHHHHHhh-hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcch
Q 016048 228 IDDMVHLLKSSPTFSQAAIVAFLSNLAD-AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEA 306 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 306 (396)
+++.++..+..++....+.......... .....+.+.+. +..+.+.. -.......+...++. +.+..+.||+|||
T Consensus 241 ~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~-~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~GRr 316 (451)
T PF00083_consen 241 WRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF-ENAGISNS--FLATLILGLVNFLGT-LLAIFLIDRFGRR 316 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccc-cccccccc--ccccccccccccccc-ccccccccccccc
Confidence 4444322110112222222222222211 22333334333 33466665 122234445556666 4556899999999
Q ss_pred hHHHHHHHHHHHHHHHHH--H--hhhh-----hHHHH-HHHHHHhhh-hhhhhhhHHHhhccCCccchhHhhhHHHHHHH
Q 016048 307 RLLSFGLLFGCVHMFLYS--V--AWSS-----WVPYA-AAVFSILSV-FSHPCLRTIVSKQVASNEQGKAQGCISGICSF 375 (396)
Q Consensus 307 ~~~~~~~~~~~i~~~~~~--~--~~~~-----~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 375 (396)
+++..+...++++.+.++ . ..+. ..... ..+.....+ +..+..+.+..|.+|++.|+++.|+....+++
T Consensus 317 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i 396 (451)
T PF00083_consen 317 KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI 396 (451)
T ss_pred cccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 999999888888777664 1 1111 11111 222222222 45677788999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhccc
Q 016048 376 ANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 376 g~~~~~~~~g~l~~~~~ 392 (396)
++.++|.+...+.+...
T Consensus 397 ~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 397 GGFIIPFLFPYLFNNLG 413 (451)
T ss_pred ccccccccccccccccc
Confidence 99999999888877653
No 91
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=4.8e-25 Score=200.27 Aligned_cols=348 Identities=19% Similarity=0.197 Sum_probs=265.3
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccC-CchhhhHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYG-RKALLTVPIT 86 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rk~~~~~~~~ 86 (396)
..+....++..+..+...|.+|.++++ .+.|..|+|.+.++..+...++++++|.++||++ +||.+.+..+
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~--------~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l 76 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLES--------RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSL 76 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHH
Confidence 346677788888899999999999654 4688899999999999999999999999999986 5788878888
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHH-----H
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTIS-----A 161 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-----~ 161 (396)
+.++........++ ++.+++.-++..+ ......|...++..+... ++++-.|-.....++|.+++... .
T Consensus 77 ~~~~~~~~~~~~~~---f~~~~~~~~l~~~-~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~ 150 (400)
T PF03825_consen 77 LSALALLLLAFSSS---FWWLFVIMLLFSF-FFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLG 150 (400)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHH
Confidence 88887777777788 8888888888887 677778888888888876 34445677777788888777443 2
Q ss_pred HHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 162 RFIST---SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 162 ~~~~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
+..++ ...+++.+...++.... .+.+|+.|++++++ ++.++...++.++.+ |+
T Consensus 151 ~~~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~----------------------~~~~~~~~~~~~~ll-k~ 206 (400)
T PF03825_consen 151 GYLGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAK----------------------ESVKKLLGLDALKLL-KN 206 (400)
T ss_pred hhhccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccC----------------------CCcccccchHHHHHh-cC
Confidence 22222 24556655555444333 35678876333210 011112233444445 56
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|++...++..++........+.+.+.|+++.-|.+....+...+...+.+++.- ...+++.+|+|.++++.++.+..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 777777778888888888899999999998744777888888888888888887 7778999999999999999999999
Q ss_pred HHHHHHHh-hhhhHHHHHH-----HHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHH-HHHHHhhhhhhhhhhhcc
Q 016048 319 HMFLYSVA-WSSWVPYAAA-----VFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGIC-SFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 319 ~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~~ 391 (396)
-..++... ++.+...... +-|..++..+.....++.+.+|++.|++++++++... .+|..+|..++|+++|++
T Consensus 286 R~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 286 RWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF 365 (400)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999887 3433333222 3478888889999999999999999999999998875 599999999999999987
Q ss_pred cCC
Q 016048 392 RFS 394 (396)
Q Consensus 392 ~~~ 394 (396)
+.+
T Consensus 366 g~~ 368 (400)
T PF03825_consen 366 GAR 368 (400)
T ss_pred cch
Confidence 644
No 92
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.95 E-value=8.6e-25 Score=200.94 Aligned_cols=368 Identities=14% Similarity=0.051 Sum_probs=264.0
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc----ccCCchh
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD----KYGRKAL 80 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~ 80 (396)
.++..+....+-..+++....+.++.|.. +++.+..+.+++..+..+..++.+|+.|+++| |+||||.
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~--------~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQ--------ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 34555667777778888999999999854 35667789999999999999999999999999 5999999
Q ss_pred hhHH-HHHhHHHHHHHHhccCch--------------hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccc--hhHH
Q 016048 81 LTVP-ITLSIIPLAILAYSRSRN--------------FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRR--ASVF 143 (396)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~--------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r--~~~~ 143 (396)
+++. .....++..+.+++++.. ..+.++++-.+..+ +.+...+...++++|.+|+++| +.+.
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~-~~n~~~~p~rALiaDl~p~~~~~~~~a~ 154 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDV-ANNMLQGPCRAFLADLTGGDARRTRIAN 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccCchhHHHHHHH
Confidence 8884 666667777777776511 01233444445555 6677778889999999998865 5789
Q ss_pred HHHHHhhhhhhHHHHHHHHHh-------------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccc
Q 016048 144 GIFSGIVSGAFVCGTISARFI-------------------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSS 204 (396)
Q Consensus 144 ~~~~~~~~~g~~~g~~~~~~~-------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~ 204 (396)
++.+...++|.++|+.+++.. +.|..|++.+++.++..++..+..||.|..++++...+
T Consensus 155 ~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-- 232 (477)
T TIGR01301 155 AYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--
Confidence 999999999999999988764 23678888888888888888888899764322110000
Q ss_pred hhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC-ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhh-hccccccc------
Q 016048 205 KAEISASCEESTKKLQVFKRLPSIDDMVHLLKS-SPTFSQAAIVAFLSNLADAGLQGSMMYYLKA-KFHFNKNQ------ 276 (396)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~------ 276 (396)
+. ++.++.+....+++.++.+++ +|.++.++++.++.+++...+..+.+.|..+ .++-++.+
T Consensus 233 ----~~------~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~ 302 (477)
T TIGR01301 233 ----EA------APPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDD 302 (477)
T ss_pred ----hc------ccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHH
Confidence 00 000000111234555554433 5678899999999999888888888887664 45433221
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHhhhhhhcc-hhHHHHHHHHHHHHHHHHHHhhh----------------------h
Q 016048 277 ----FADLMVIAGIAGTISQLIMMPVLAPTVGE-ARLLSFGLLFGCVHMFLYSVAWS----------------------S 329 (396)
Q Consensus 277 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~i~~~~~~~~~~----------------------~ 329 (396)
..+....+++...+.+ ++.+++.+|+|+ |++...+.++.++++....+... .
T Consensus 303 gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (477)
T TIGR01301 303 GVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKA 381 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHH
Confidence 1233445566666666 556789999985 67778888888888877765432 1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHhhccCC--ccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 330 WVPYAAAVFSILSVFSHPCLRTIVSKQVAS--NEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
........+|+..+..+...++++++..|+ +..|..+|+.|.+..+.+.+.....|.+.+.++++
T Consensus 382 ~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~ 448 (477)
T TIGR01301 382 SALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGG 448 (477)
T ss_pred HHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 122235566888888999999999999995 45699999999999999999999999976666543
No 93
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.3e-27 Score=208.77 Aligned_cols=377 Identities=14% Similarity=0.113 Sum_probs=262.0
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
--.+.+.+.++...+.++.|.+-....+.....-+.++-..+.+..+..+|.++||++.|+++||+|||+++...+++..
T Consensus 46 AG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImI 125 (538)
T KOG0252|consen 46 AGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMI 125 (538)
T ss_pred hhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHH
Confidence 34567788888888888877776554433333345777788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCc----hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 90 IPLAILAYSRSR----NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 90 ~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
+++++++++... ...+++...|++.|+ |.|+.+|...++.+|...+++||...+.+.+..+.|.+.|.+++-.+
T Consensus 126 i~t~~~~~s~~~~~~~~~m~~L~~~R~~LGi-GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 126 ICSALSGLSVGTTSPLGVMMTLCFFRFLLGI-GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred HHHHHhccCCCCCCCcchhhHHHHHHHHhhc-cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 999988876432 246889999999999 99999999999999999999999999999888888888887766543
Q ss_pred ------------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccc-cccccchhhhhh-----hhhhhhhhhh
Q 016048 165 ------------------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLY-TPILSSKAEISA-----SCEESTKKLQ 220 (396)
Q Consensus 165 ------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~l~~~~~~~~~-----~~~~~~~~~~ 220 (396)
-||..|.+.+++++.... .++.+||+++.+.-. +..+...+|... .++++....+
T Consensus 205 ~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~ 283 (538)
T KOG0252|consen 205 AIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESD 283 (538)
T ss_pred HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccC
Confidence 388888887777766544 567899998754100 000000000000 0000000111
Q ss_pred hhccCCChhHHhhhhcCC--hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhh-H---HHHHHH----HH-H
Q 016048 221 VFKRLPSIDDMVHLLKSS--PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFAD-L---MVIAGI----AG-T 289 (396)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~---~~~~~~----~~-~ 289 (396)
...++.+.+...+.+.+. +++.-.+...++.-.+++..+.+....+++. |+.+.+... . .+..+. .+ +
T Consensus 284 ~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~~v 362 (538)
T KOG0252|consen 284 VPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCSTV 362 (538)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHccC
Confidence 111112222222222222 4555566777888888888887777777654 766654333 1 111111 11 1
Q ss_pred HHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHhhhhhhhhhhHHHhhccCCccch
Q 016048 290 ISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWV------PYAAAVFSILSVFSHPCLRTIVSKQVASNEQG 363 (396)
Q Consensus 290 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 363 (396)
.+. .+...++|++|||+....+++++.+..+.++...+... ....+...++..+-......+.+|.+|.+.||
T Consensus 363 PGy-w~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 363 PGY-WFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred Cce-eEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 122 23346789999999999999999999988887655211 11122333445555667788899999999999
Q ss_pred hHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 364 KAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 364 ~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+..|+....+.+|++++...++++.++
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 999999999999999999999998873
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=6.2e-25 Score=209.55 Aligned_cols=333 Identities=16% Similarity=0.150 Sum_probs=232.2
Q ss_pred cchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccch
Q 016048 42 ECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGS 121 (396)
Q Consensus 42 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 121 (396)
....+.....+..+++.+|.++|++++|+++||+|||++++.+.++..++.+..++++| ++.+++.|++.|+ +.++
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~-~~~~ 187 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGF-FGSG 187 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHh-hccc
Confidence 34456678899999999999999999999999999999999999999999999999999 9999999999999 8899
Q ss_pred hhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--
Q 016048 122 IHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--STSAAFQAATAGSIISAVYMRIFLPESVRDEDL-- 197 (396)
Q Consensus 122 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~-- 197 (396)
.......+++|+.++++|+.+..+ ......+..+++..++++ +||+.+++..++..+..++ ++..||+|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 999999999999999999999999 666666666666666555 7999999999988877665 5666799874221
Q ss_pred -----ccccccchhh----hhhh--hhhhhhhhhhh----ccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhH
Q 016048 198 -----YTPILSSKAE----ISAS--CEESTKKLQVF----KRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSM 262 (396)
Q Consensus 198 -----~~~l~~~~~~----~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (396)
.+.+++..+. .... .+.....+..+ +++..+.+.+ +.++++...+...+..+.......-+
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~l~~~~~~~~~~~~~~~~~y~gl 341 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLF----RTPRLRYRTLYLLFIWFVFSLVYYGL 341 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhh----cCHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 1122221110 0000 00000001111 1112233332 34434333333333332222222222
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhH---HHHH-HHH
Q 016048 263 MYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWV---PYAA-AVF 338 (396)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~~ 338 (396)
+... ..+|-+. .......+....... ...+...|+.|||.....+..+..++++...+...... .+.. .+.
T Consensus 342 ~~~~-~~lg~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (521)
T KOG0255|consen 342 SLNV-SGLGGNI---YLNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLG 416 (521)
T ss_pred hhhh-hhcCchH---HHHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 2222 2223322 333444445666666 56578899999999999999999999999888765332 3333 333
Q ss_pred HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 339 SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
..+.+..+...+.+..|.+|+..|..+.+..+....++++++|.+.-....
T Consensus 417 ~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 417 KFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666777779999999999999999999999999999999988754433
No 95
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=4.1e-25 Score=187.61 Aligned_cols=336 Identities=13% Similarity=0.059 Sum_probs=236.1
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhcc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCE 119 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 119 (396)
+..++.+.-+..++......+..+++..+|..+|++|||+.+....+...+...+.+.++| +.++.+.|.+.|+ |.
T Consensus 105 ~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~-g~ 180 (528)
T KOG0253|consen 105 DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGF-GV 180 (528)
T ss_pred HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhc-cC
Confidence 5567788889999999999999999999999999999999999999999999999999999 9999999999999 88
Q ss_pred chhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 016048 120 GSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF----ISTSAAFQAATAGSIISAVYMRIFLPESVRDE 195 (396)
Q Consensus 120 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~----~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 195 (396)
|+ .|...++-.|..|..+|..-+-.. ..+.+|.+....++.. +||||.......+..+.+.. .+++||+|+..
T Consensus 181 gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ESpRf~ 257 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYESPRFY 257 (528)
T ss_pred CC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccCcchh
Confidence 88 789999999999999998876666 8889998888777654 49999888877655555554 47899999732
Q ss_pred ----cccc---ccccch----------------hhhhhhhhhhh---hhhhhhccCCChhHHhhhhcCChhHHHHHHHHH
Q 016048 196 ----DLYT---PILSSK----------------AEISASCEEST---KKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAF 249 (396)
Q Consensus 196 ----~~~~---~l~~~~----------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (396)
+..+ .+++.. .+..++++.+. ..+..++...+..+++.--. ++.-..+....+
T Consensus 258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~l-rkttlllw~iwf 336 (528)
T KOG0253|consen 258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKL-RKTTLLLWRIWF 336 (528)
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHH-HHHHHHHHHHHH
Confidence 1111 122210 01111111010 11111222223333331100 122223344445
Q ss_pred HHHHhhhhhhhhHHHHhh-----------------hhc--cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHH
Q 016048 250 LSNLADAGLQGSMMYYLK-----------------AKF--HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLS 310 (396)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~-----------------~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 310 (396)
...+.+++..-......+ ... ..+...--.=.....+....|. ++.+++.||+|||+.+.
T Consensus 337 gnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGl-LIt~~iverlGRKkTMa 415 (528)
T KOG0253|consen 337 GNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGL-LITGVIVERLGRKKTMA 415 (528)
T ss_pred hhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHH
Confidence 555555554332222222 110 0111111111345677788888 77789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhh
Q 016048 311 FGLLFGCVHMFLYSVAWSSW-VPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAF 384 (396)
Q Consensus 311 ~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 384 (396)
.++++++++.+++....+.. .....+..-++..+.+...+.|..|++|+..|+++.|..+.++++|+++.|.++
T Consensus 416 l~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 416 LSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 99999999888877655433 233345556777888899999999999999999999999999999999999887
No 96
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.1e-24 Score=202.73 Aligned_cols=347 Identities=15% Similarity=0.124 Sum_probs=264.6
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHH-HHHHHhhhc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYV-LRTLTAMVC 118 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~ 118 (396)
+++++.+..+.+|+.++......+..|+.+.+.||+|.|++.+++.++..++.++..++++ +|.+++ .-++.|+ |
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~-G 148 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGL-G 148 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhc-c
Confidence 4455666677999999999999999999999999999999999999999999999999999 777665 5677788 8
Q ss_pred cchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 119 EGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
.+..+......+..+++ |+|+.+.|+...+.++|.++-|.+..++ |||+.+++.+.+.+-..+......|.+++.
T Consensus 149 ~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~ 227 (509)
T KOG2504|consen 149 LGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPK 227 (509)
T ss_pred chhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 89998888999998776 8999999999999999988887777654 999999999988877777665665633332
Q ss_pred ccc-c----------ccc-----ccc-hhhhhhhh---hhhhhhhhhhccCC--ChhHHhh----hhcCChhHHHHHHHH
Q 016048 195 EDL-Y----------TPI-----LSS-KAEISASC---EESTKKLQVFKRLP--SIDDMVH----LLKSSPTFSQAAIVA 248 (396)
Q Consensus 195 ~~~-~----------~~l-----~~~-~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~ 248 (396)
.+. . +.. ++. .++....+ ....+.++.+++.. +.+..+. .+.+++.++...+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~ 307 (509)
T KOG2504|consen 228 KPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSN 307 (509)
T ss_pred CchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHH
Confidence 111 0 000 000 00000000 00000000000000 1111111 133578898888888
Q ss_pred HHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc--chhHHHHHHHHHHHHHHHHHHh
Q 016048 249 FLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG--EARLLSFGLLFGCVHMFLYSVA 326 (396)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~~~ 326 (396)
.+....+.....++|.|..+ .+++..+++.+++..++..++++ ++.|++.|+.. ++.+..++.+..+++....+..
T Consensus 308 ~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 308 LFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999985 59999999999999999999999 77789999976 4556667777777777777777
Q ss_pred hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 327 WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 327 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.+.+.... ..++|+..+.........+.|+++.++-..+.|+...++.++..+||++.|.+.|...+
T Consensus 386 ~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 386 TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN 453 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC
Confidence 77765555 56667777777777778999999999999999999999999999999999999988764
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=2.4e-23 Score=196.18 Aligned_cols=361 Identities=12% Similarity=0.054 Sum_probs=231.2
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc-cCCchhhh
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK-YGRKALLT 82 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~~ 82 (396)
++.++.++...+...++.....+.++.|+.+ +++.+..+.+++.+.+........+++|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-------~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVK-------QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 4457778888889999988888888988765 455666677777777766666666789999999 59999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCccc--chhHHHHHHHhhhhhhHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGR--RASVFGIFSGIVSGAFVCGTIS 160 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~ 160 (396)
.+.++.+++..+++++++. .+.+.++|.++|+ +.|...+...+++.|++|+++ |..++++++...++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gi-g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAV-GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHH-hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999887531 5667788999999 888888888999999998654 4567888899999999999999
Q ss_pred HHHh----hhHHHHHHHHHHHHHHH---HHHHHhcCCCCCCccc--ccccccch-----------hh-hhhhhhhhhh--
Q 016048 161 ARFI----STSAAFQAATAGSIISA---VYMRIFLPESVRDEDL--YTPILSSK-----------AE-ISASCEESTK-- 217 (396)
Q Consensus 161 ~~~~----~~~~~f~~~~~~~~~~~---~~~~~~~~e~~~~~~~--~~~l~~~~-----------~~-~~~~~~~~~~-- 217 (396)
++++ +||+.|.+.++...+.. +.....++|.+++.++ .|..+... .. ...+.+....
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMAL 249 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 8876 89999998876444432 2233344543221111 11000000 00 0000000000
Q ss_pred --------hh-hhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhh----hc-----cccccchhh
Q 016048 218 --------KL-QVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKA----KF-----HFNKNQFAD 279 (396)
Q Consensus 218 --------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----g~~~~~~~~ 279 (396)
.. .....+.+..+ ++| ....+. .+.....++......+.++.. .. |+. ...++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~ 320 (500)
T PRK09584 250 GVVALGIVVIFGKEAFAMKGAA------RRK-MIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQ 320 (500)
T ss_pred HHHHHHHHHHHHHHHhhcCHHH------HHH-HHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHH
Confidence 00 00000000001 112 221111 222223333344444444332 11 211 12466
Q ss_pred HHHHHHHHHHHHHHHHH----HhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh---------h-hHHHHHHHHHHhhhhh
Q 016048 280 LMVIAGIAGTISQLIMM----PVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS---------S-WVPYAAAVFSILSVFS 345 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~~~----~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~ 345 (396)
+.+...+..++.. ++. +++.+|.+..+.+.++.++.+++++.+..... . +......+.+++....
T Consensus 321 ~~s~n~i~iil~~-p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~ 399 (500)
T PRK09584 321 YQALNPFWIMIGS-PILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMI 399 (500)
T ss_pred HHHHhHHHHHHHH-HHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 6677777777776 333 34444555557788889999999888776544 2 3344467779999999
Q ss_pred hhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhh
Q 016048 346 HPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAF 384 (396)
Q Consensus 346 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 384 (396)
.|...+++.+..|++.||+++|.......+|..++..+.
T Consensus 400 ~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 400 SGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred hHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999977666665555554444
No 98
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.93 E-value=8.4e-23 Score=189.07 Aligned_cols=328 Identities=15% Similarity=0.164 Sum_probs=249.2
Q ss_pred HHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH-HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHH
Q 016048 47 IYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV-PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCL 125 (396)
Q Consensus 47 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 125 (396)
.+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+++....+.+ +..++...+..++.-+ +.+.....
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~-~~~~~~~~~l~iia~v-~~~~~~vf 146 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVS-PGQWWLALVLFIIANV-GYEASNVF 146 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhC-cchHHHHHHHHHHHHH-HHHHHHHH
Confidence 4566889999999999999999999999987666655 5555556666666652 2224555555666665 66777788
Q ss_pred HHHHHhcCCCcccc--------------------------hhHHHHHHHhhhhhhHHHHHHHHHh------------hhH
Q 016048 126 SLAYVADNVPPGRR--------------------------ASVFGIFSGIVSGAFVCGTISARFI------------STS 167 (396)
Q Consensus 126 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~------------~~~ 167 (396)
..+++.|..+++++ ++..+.-.....+|.++.-++.-.+ +-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999999988 8888887777777777665554332 137
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHH
Q 016048 168 AAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIV 247 (396)
Q Consensus 168 ~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (396)
..+.+.++..++..+...+++||.|+.++.++ ..+.....-+..++.++.+++.|.....+++
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~-----------------~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia 289 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPS-----------------GSSYLRFGFKRLWRTFKEIRKLRQLFLFLIA 289 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCc-----------------chhHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 78888888888888888888998876322100 0000001111233344556678889999999
Q ss_pred HHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcch--hHHHHHHHHHHHHHHHHHH
Q 016048 248 AFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEA--RLLSFGLLFGCVHMFLYSV 325 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~~~~~~~~~~i~~~~~~~ 325 (396)
.++..-+...+......|.++.+|++..+...+.....+.++++. ++.+++.||+|.| +++..+.....+..+.-.+
T Consensus 290 ~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 290 YFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 999998889999999999999999999999999999999999999 7778999999998 7777776665333333222
Q ss_pred --------hhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 326 --------AWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 326 --------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
..+.+..++ ..+.|...+..++...++.+|+.|+++.+..+|++...+...+.+||.+.|.+.+..++.
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~ 446 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQ 446 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 233444444 667789999999999999999999999999999999999999999999999999998754
No 99
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=7.9e-23 Score=190.49 Aligned_cols=359 Identities=13% Similarity=0.064 Sum_probs=244.0
Q ss_pred HhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHh
Q 016048 18 CFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAY 97 (396)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~ 97 (396)
++........++.+..| +++.. ...|+.+...++..++.++.|+++|.+|||..++.+.++..+|.++++.
T Consensus 57 ~~~~~~~a~~l~~I~~d-iG~~~--------~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 57 YFVLVLPASILPYINAD-IGGSD--------NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHhccHHHHHHHHHh-cCCCc--------cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 34444445556655333 33221 3477888899999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHH
Q 016048 98 SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAA 173 (396)
Q Consensus 98 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~ 173 (396)
++| ...++++..+.|+ +.|... .....++|..|.|.|....++.....-.....+|.++..+ +|||.|++.
T Consensus 128 A~~---~~~~iag~~l~Gv-gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~ 202 (599)
T PF06609_consen 128 AQN---MNTFIAGMVLYGV-GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIF 202 (599)
T ss_pred CCc---HHHHHHHHHHHHH-hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHH
Confidence 999 9999999999999 765554 5667799999999998877776665555555677777654 799999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccc------ccccccc-----------------------hh-hhhhhhhhhh-------
Q 016048 174 TAGSIISAVYMRIFLPESVRDEDL------YTPILSS-----------------------KA-EISASCEEST------- 216 (396)
Q Consensus 174 ~~~~~~~~~~~~~~~~e~~~~~~~------~~~l~~~-----------------------~~-~~~~~~~~~~------- 216 (396)
.+...+.+++..++...+++++.+ ++.+++. .. ..+++.+...
T Consensus 203 ~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~ 282 (599)
T PF06609_consen 203 IIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV 282 (599)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH
Confidence 888777665544443322221111 1122220 00 0111111000
Q ss_pred ------hhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccc---chhhHHHHHHHH
Q 016048 217 ------KKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKN---QFADLMVIAGIA 287 (396)
Q Consensus 217 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~ 287 (396)
-.+.....++++.. .++++++|.+...+++.++....++....+.|......++-++. ..++.....+.+
T Consensus 283 ~Lv~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg 361 (599)
T PF06609_consen 283 LLVAFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFG 361 (599)
T ss_pred HHHHHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHH
Confidence 00111111222221 12344446677777777777777788888888888777776653 567777888888
Q ss_pred HHHHHHHHHHhhhhhhcc-hhHHHHHHHHHHHHHHHHHHhh--hhhH-HHHHHHHHHhhhhhhhhhhHHHhhccCCccch
Q 016048 288 GTISQLIMMPVLAPTVGE-ARLLSFGLLFGCVHMFLYSVAW--SSWV-PYAAAVFSILSVFSHPCLRTIVSKQVASNEQG 363 (396)
Q Consensus 288 ~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~i~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 363 (396)
..++. .+.+.+..+++| |+.+..+..++.+++.++.... +... ....++.+++.+..........+-.+|+++-|
T Consensus 362 ~~~g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig 440 (599)
T PF06609_consen 362 SCAGA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIG 440 (599)
T ss_pred HHHHH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHH
Confidence 88888 556778887776 4455567666666655555432 2222 22245557777777777777778889999999
Q ss_pred hHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 364 KAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 364 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
++.|+...++.+|+.++..+...++..-.
T Consensus 441 ~a~gL~~s~R~~GGsIg~aIy~~I~~n~~ 469 (599)
T PF06609_consen 441 TATGLTGSIRSIGGSIGYAIYNAIFTNKL 469 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhh
Confidence 99999999999999999999988876543
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.93 E-value=4.6e-23 Score=193.89 Aligned_cols=351 Identities=13% Similarity=0.086 Sum_probs=240.1
Q ss_pred HHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc----ccCC-chhhhHHHH
Q 016048 12 ITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD----KYGR-KALLTVPIT 86 (396)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-k~~~~~~~~ 86 (396)
++.+...+..++..+.++.|..+ .+++++.+.|.+..+..+..++..|+.|.++| |+|| |+.++.+..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~-------v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i 85 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTD-------VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTL 85 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhH
Confidence 44455566667777777888655 45788899999999999999999999999999 6699 455555777
Q ss_pred HhHHHHHHHHhccCc---hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCC-CcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 87 LSIIPLAILAYSRSR---NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV-PPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
..+++..+....++. ..+..+++...+.++ +.....+...++..|.+ ++++|.+..+......++|..+.+.+..
T Consensus 86 ~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 86 ANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGM-TYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHH-HHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666443321 124455666667677 66777778889999998 5889999988877666766555443322
Q ss_pred H----h-------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHH
Q 016048 163 F----I-------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDM 231 (396)
Q Consensus 163 ~----~-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
. + +|+....+.+++.++..+...+..||.++++++ +++++++.++++.
T Consensus 165 ~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~---------------------~~~~~~~~~~~~~ 223 (473)
T PRK10429 165 PFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQ---------------------VSAEGSHLTLKDI 223 (473)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccc---------------------ccccccCCCHHHH
Confidence 1 2 344455555555555444454445664322110 0011223457777
Q ss_pred hhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHH
Q 016048 232 VHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSF 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 311 (396)
++.++++|.++..+...++..........+.++|.+...+ ++...+.+.....+..+++. ++.+++.||+|+|+.+..
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLSRRILWAG 301 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHH
Confidence 7767688888888887777777666666666656554433 44555666666678888888 667899999999999888
Q ss_pred HHHHHHHHHHHHHHh----h-hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccC-------CccchhHhhhHHHHHHHHHH
Q 016048 312 GLLFGCVHMFLYSVA----W-SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVA-------SNEQGKAQGCISGICSFANL 378 (396)
Q Consensus 312 ~~~~~~i~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~ 378 (396)
+..+..++.+.+... + +.+...+ ..+.+++.+...+...++++|..| .+..|..+|..+....++..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~a 381 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSA 381 (473)
T ss_pred HHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHH
Confidence 877666555444321 1 2222222 445567778888888999999976 33456699999999999999
Q ss_pred hhhhhhhhhhhcccC
Q 016048 379 VSPLAFSPLTGDCRF 393 (396)
Q Consensus 379 ~~~~~~g~l~~~~~~ 393 (396)
+++.+.|.+++..+.
T Consensus 382 l~~~i~g~~l~~~Gy 396 (473)
T PRK10429 382 FAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999987643
No 101
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=1.6e-23 Score=186.74 Aligned_cols=358 Identities=15% Similarity=0.115 Sum_probs=252.8
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
|+++.+......++..+.++...|..|.++++ +.|++..++|.+.++..+..++.+|+.|.++||+|.||-++
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~-------~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll 77 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQ-------VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL 77 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence 45577788888899999999999999999765 35789999999999999999999999999999999777655
Q ss_pred HHHHHhH---HHHHHHHh----ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhH
Q 016048 83 VPITLSI---IPLAILAY----SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFV 155 (396)
Q Consensus 83 ~~~~~~~---~~~~~~~~----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 155 (396)
....... .......+ ..| .+...+++-...|+ ......|+..+++.++. ++.+.-.|-.....++|.+
T Consensus 78 ~~i~~l~~l~~pff~~v~~pll~~n--~~lg~iig~i~l~~-~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 78 WFIAILLLLFGPFFIYVFGPLLQSN--FWLGAIIGGIYLGL-VFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp HHHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTT-TTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-HHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHH
Confidence 4332221 12222122 122 02334444455566 55666778888877765 4445567788889999999
Q ss_pred HHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHh
Q 016048 156 CGTISARFI---STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV 232 (396)
Q Consensus 156 ~g~~~~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
++..++|.+ +.+..||+.....++..++..+..|+.+++.+.++ .+..++++.+.++..
T Consensus 153 i~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~ 214 (412)
T PF01306_consen 153 IASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD------------------ALGAKKDKVSLKDVL 214 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST------------------TSSS------HHHHH
T ss_pred HHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc------------------ccccCCCCCcHHHHH
Confidence 999999876 45677887666655555544344444333222110 111122333566666
Q ss_pred hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHH
Q 016048 233 HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKF---HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLL 309 (396)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 309 (396)
+.+ |+|++|...+........+......++.|..+.+ +.++...|.+.+..-+...+.. .+.+++.+|+|.|+.+
T Consensus 215 ~l~-k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k~~L 292 (412)
T PF01306_consen 215 SLF-KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAKNLL 292 (412)
T ss_dssp HHT-TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHH
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChHhHH
Confidence 655 5788887777666666666777666777776543 4556678999998888888888 7889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHhhhhhhhhhhHHHhhccCCccchhHhhhH-HHHHHHHHHhhhhhhhhh
Q 016048 310 SFGLLFGCVHMFLYSVAWSSWVPYAAAVF-SILSVFSHPCLRTIVSKQVASNEQGKAQGCI-SGICSFANLVSPLAFSPL 387 (396)
Q Consensus 310 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l 387 (396)
.++..++.+-....++.++++.....=++ +.-.........-++.+.+|++..++.+.+. +...++|..+.+.+.|.+
T Consensus 293 llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~l 372 (412)
T PF01306_consen 293 LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYL 372 (412)
T ss_dssp HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhh
Confidence 99999999999999998888776664444 6667788889999999999999999999986 677889999999999999
Q ss_pred hhccc
Q 016048 388 TGDCR 392 (396)
Q Consensus 388 ~~~~~ 392 (396)
+|+.+
T Consensus 373 yd~~G 377 (412)
T PF01306_consen 373 YDRIG 377 (412)
T ss_dssp HHHHH
T ss_pred HhhcC
Confidence 99875
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=2.3e-22 Score=188.06 Aligned_cols=337 Identities=13% Similarity=0.061 Sum_probs=221.8
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc----cCCchh-hhHHHHHhHHHHHHH
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK----YGRKAL-LTVPITLSIIPLAIL 95 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~-~~~~~~~~~~~~~~~ 95 (396)
.......++.+..+ +++++..+.|.+.++..+..++..|+.|.++|| +||||. ++.+.+..+++..+.
T Consensus 25 ~~~~~~~l~~~~t~-------~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~ 97 (444)
T PRK09669 25 WQTVMLFLAYFYTD-------VFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT 97 (444)
T ss_pred HHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 34444555555444 578899999999999999999999999999998 788555 445767777777665
Q ss_pred HhccCc---hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCC-CcccchhHHHHHHHhhhhhhHHHHHHH----HHh---
Q 016048 96 AYSRSR---NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV-PPGRRASVFGIFSGIVSGAFVCGTISA----RFI--- 164 (396)
Q Consensus 96 ~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~----~~~--- 164 (396)
...++. ..++.+++...+.+. +.........++.+|+. ++++|++..+.......+|..+++.+. ..+
T Consensus 98 f~~p~~~~~~~~~~~~~~~~l~~~-~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~ 176 (444)
T PRK09669 98 FYTPDFGATGKIIYACVTYILLSL-VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKG 176 (444)
T ss_pred HhCCCCCcchHHHHHHHHHHHHHH-HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 555431 124556666666676 55566667788999998 457899888888877777776665433 222
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChh
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPT 240 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
+|+..+.+.+++..+..+..++..+|.+++++ +++.+.++.++.+.++|.
T Consensus 177 ~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~--------------------------~~~~~~~~~~~~~~~n~~ 230 (444)
T PRK09669 177 DEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV--------------------------DNSSSVWKDLKLLLGNSQ 230 (444)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--------------------------cCCCCHHHHHHHHhCCch
Confidence 46666666666666655545444455322111 011223333444456787
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
++..+...++............++|.+...+. ++..+.......+..+++. ++.+++.||+|+|+....+.....+..
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 87777666665555544444444444443332 2233444444456666666 677899999999999888776655443
Q ss_pred HHHHHh-h-hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCC-------ccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 321 FLYSVA-W-SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVAS-------NEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 321 ~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
..+... . +.+...+ ..+.+++.+...+...++++|..+. +..|..+|..+....+|..++|.+.|.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 309 ALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333222 2 2332233 4556888888889999999998862 3356788999999999999999999999987
Q ss_pred ccC
Q 016048 391 CRF 393 (396)
Q Consensus 391 ~~~ 393 (396)
.+-
T Consensus 389 ~Gy 391 (444)
T PRK09669 389 VDY 391 (444)
T ss_pred cCC
Confidence 654
No 103
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=7.1e-23 Score=178.61 Aligned_cols=354 Identities=11% Similarity=0.075 Sum_probs=269.2
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH-HHHHhHHHHHHHHhcc
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV-PITLSIIPLAILAYSR 99 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~-~~~~~~~~~~~~~~~~ 99 (396)
.-....+.|.|+.+....+..+..-+....|+..++..+..++.+|+.|.++|+.|+||.... ...+..++..+..+.+
T Consensus 31 ~ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~ 110 (438)
T COG2270 31 AIVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP 110 (438)
T ss_pred eeeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC
Confidence 345566778888886544333444455678999999999999999999999999997666555 5555556666667776
Q ss_pred CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH--HHh-------------
Q 016048 100 SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA--RFI------------- 164 (396)
Q Consensus 100 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~~------------- 164 (396)
+...++..++...+..+ +.....+...+++.|..++++-++..+.-.....+|.++.-+.. ...
T Consensus 111 ~~s~~~~~l~~~il~~i-~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~ 189 (438)
T COG2270 111 PGSYLLLLLLFLILASI-GFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLG 189 (438)
T ss_pred CCchHHHHHHHHHHHHH-hcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeec
Confidence 63336667777888888 88888889999999999998888876665555555555443322 111
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcC
Q 016048 165 -------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKS 237 (396)
Q Consensus 165 -------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
.-|..+.+.++..++..+...+..||.++..++. .+...+.-++.++.++..++
T Consensus 190 l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-------------------~~~l~~g~k~L~~t~k~i~~ 250 (438)
T COG2270 190 LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-------------------PTALRNGFKELKSTFKEIRG 250 (438)
T ss_pred cCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-------------------hHHHHHHHHHHHHHHHHHhc
Confidence 2377888888888888887777777765432110 00000111123333444557
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
++++...+++.++..-........-..|....+|++..+...+.....+.+++++ ++.|++.||+|.|+++..+.++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHHHHH
Confidence 7888888999998888888888888999998999999999999999999999999 788899999999999999988877
Q ss_pred HHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCCC
Q 016048 318 VHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRFSS 395 (396)
Q Consensus 318 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 395 (396)
+..+...+.......+. .++++...+..+....++..+++|+++.++.+|+++..++..+.++|.+.+.+.+.+++.+
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r 408 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSR 408 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchh
Confidence 77666655554444444 5777999999999999999999999999999999999999999999999999999887653
No 104
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=7.4e-23 Score=183.40 Aligned_cols=334 Identities=10% Similarity=0.057 Sum_probs=223.0
Q ss_pred CCcchhHHHH-HHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhc
Q 016048 40 RDECSLAIYL-SGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVC 118 (396)
Q Consensus 40 ~~~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 118 (396)
.++++++..+ .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++..++.+++++ ++.+.+.|++.|+ +
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGv-a 128 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSV-T 128 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-H
Confidence 3367888888 999999999999999999999999999999999999999999999999999 9999999999999 9
Q ss_pred cchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh---hhHHHHHH---HHHHHHHHHHHHHHhcCCCC
Q 016048 119 EGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI---STSAAFQA---ATAGSIISAVYMRIFLPESV 192 (396)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~~f~~---~~~~~~~~~~~~~~~~~e~~ 192 (396)
.|... +...++.+|+|+++|+++.++...+..+|.++++++++.+ +||+-+.+ ......+ .++..+++|..+
T Consensus 129 EA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~-a~~~a~~LP~~~ 206 (511)
T TIGR00806 129 MAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTF-SVFLALFLKRPK 206 (511)
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH-HHHHHHhCCCCc
Confidence 99998 9999999999999999999999999999999999888765 78764433 3332333 344457888544
Q ss_pred CC-----ccccc-ccccchhhhhhhhhhhhhhhhhhccCC----ChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhH
Q 016048 193 RD-----EDLYT-PILSSKAEISASCEESTKKLQVFKRLP----SIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSM 262 (396)
Q Consensus 193 ~~-----~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (396)
+. +++.+ ......++..+++.....+..+.+... -+.++.+.. +++.+....+=..+....++...++.
T Consensus 207 ~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y-~n~~vl~WSlWwa~a~~g~~qv~~Y~ 285 (511)
T TIGR00806 207 RSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIY-RNPQLLLWSLWWVFNSAGYYLITYYV 285 (511)
T ss_pred hhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHh-cCcchhhhhHHHHHHhhHHHHHHHHH
Confidence 31 10000 000000000000000000000000001 122222223 34444333333334444445555555
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcch--hHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHH
Q 016048 263 MYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEA--RLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFS 339 (396)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 339 (396)
.....+..+-.+...|..-++..+.+.+.. +..|++-.+..+. ..+.+..++.+..++++....+.|..+. .+++.
T Consensus 286 Q~LW~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~ 364 (511)
T TIGR00806 286 HTLWGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFR 364 (511)
T ss_pred HHHHHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHH
Confidence 555544322122245777777777777777 6667765544332 3344445555666777777788888777 45557
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhh
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSP 381 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 381 (396)
..+....++....+++....+.-|-.+|+.+++.-+-..+-.
T Consensus 365 ~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT 406 (511)
T TIGR00806 365 GIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIIT 406 (511)
T ss_pred HHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheE
Confidence 778888888888888888878889999988887765554433
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.92 E-value=3.7e-23 Score=192.44 Aligned_cols=325 Identities=15% Similarity=0.123 Sum_probs=252.8
Q ss_pred cchhHHHHHHHHHHHHhHHHHhhhhccccccc----ccCCchhhh-HHHHHhHHHHHHHHhc-c-Cch---hHHHHHHHH
Q 016048 42 ECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD----KYGRKALLT-VPITLSIIPLAILAYS-R-SRN---FFYAYYVLR 111 (396)
Q Consensus 42 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~~~-~~~~~~~~~~~~~~~~-~-~~~---~~~~l~~~r 111 (396)
.+++++...|++..+..+..++..|+.|.++| |+||||.++ .+....+++..++... + +.. ....+.+..
T Consensus 31 ~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~ 110 (428)
T PF13347_consen 31 VLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFY 110 (428)
T ss_pred HcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHH
Confidence 45788899999999999999999999999999 899876666 5778888887777766 4 111 134456777
Q ss_pred HHHhhhccchhhHHHHHHHhcCCC-cccchhHHHHHHHhhhhhhHHHHHHHHH----h-------hhHHHHHHHHHHHHH
Q 016048 112 TLTAMVCEGSIHCLSLAYVADNVP-PGRRASVFGIFSGIVSGAFVCGTISARF----I-------STSAAFQAATAGSII 179 (396)
Q Consensus 112 ~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~----~-------~~~~~f~~~~~~~~~ 179 (396)
++..+ +.........++..|.++ +++|.+..+.-+....+|.++.+.+... + +|++...+.+++.++
T Consensus 111 ~l~~~-~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v 189 (428)
T PF13347_consen 111 ILFDI-AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLV 189 (428)
T ss_pred HHHHH-hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHH
Confidence 77787 778888888999999998 5789999998888888877644433332 2 478888888888888
Q ss_pred HHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhh
Q 016048 180 SAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQ 259 (396)
Q Consensus 180 ~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (396)
..++..+..||.+++.+ +++++.++++.++.++++|.++......++.........
T Consensus 190 ~~~i~~~~~ke~~~~~~------------------------~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~ 245 (428)
T PF13347_consen 190 FFLITFFFVKERSVEVT------------------------EQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMN 245 (428)
T ss_pred Hhhhhhheeeecccccc------------------------ccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhh
Confidence 77777777888222111 122333455555666688899988888888888888888
Q ss_pred hhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh--hhhHHHH-HH
Q 016048 260 GSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW--SSWVPYA-AA 336 (396)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~-~~ 336 (396)
...++|.++..|.+ ...+.......+..+++. ++.+++.||+|+|+....+..+.+++.+.+.+.. +.+...+ ..
T Consensus 246 ~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 323 (428)
T PF13347_consen 246 TFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFI 323 (428)
T ss_pred hHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 88888888887777 455777777888888888 6778999999999999999999999988887775 4444444 55
Q ss_pred HHHHhhhhhhhhhhHHHhhccCC-------ccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 337 VFSILSVFSHPCLRTIVSKQVAS-------NEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
+.+++.+..+....++.+|..+. ++.|..+|+.+....++..+++.+.|.+.+..+.
T Consensus 324 l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 324 LAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 66888888889999999998873 4469999999999999999999999999887543
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=7.7e-22 Score=184.81 Aligned_cols=345 Identities=12% Similarity=0.050 Sum_probs=227.4
Q ss_pred HHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc----CCchhh-hHHHH
Q 016048 12 ITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY----GRKALL-TVPIT 86 (396)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grk~~~-~~~~~ 86 (396)
.+.+...+..++..+.++.|..+ ..+++..+.|.+.++..+..++..++.|+++||. ||||.+ ..+.+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~-------~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTD-------VAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 34445566666677777777655 4577889999999999999999999999999996 777765 44555
Q ss_pred HhHHHHHHHHhcc-C---chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-ccchhHHHHHHHh-----hhhhhHH
Q 016048 87 LSIIPLAILAYSR-S---RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-GRRASVFGIFSGI-----VSGAFVC 156 (396)
Q Consensus 87 ~~~~~~~~~~~~~-~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~g~~~ 156 (396)
...+...+....+ . ....+.+++...+.++ +.+...+...++..|..++ ++|.+..+.-..+ ..++..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ 166 (448)
T PRK09848 88 PLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGL-CYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLI 166 (448)
T ss_pred HHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHH-HHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444332111 1 0113334455566777 6677777777777776654 6788776655443 3355666
Q ss_pred HHHHHHHhhh----HH--HHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhH
Q 016048 157 GTISARFIST----SA--AFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDD 230 (396)
Q Consensus 157 g~~~~~~~~~----~~--~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (396)
+|.++...+. .+ ...+.+++..+..++.....||++++++ ++.+.++
T Consensus 167 ~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~---------------------------~~~~~~~ 219 (448)
T PRK09848 167 GPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV---------------------------AQPSLKI 219 (448)
T ss_pred HHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc---------------------------cCCCHHH
Confidence 7776655321 11 1122222222222223333454422111 0112333
Q ss_pred HhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHH
Q 016048 231 MVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLS 310 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 310 (396)
.++.+.++|.+....+..++....+.......|+|.++.+|.++...+.......+..+++. ++.+++.||+++|+.+.
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~r~g~~~~~~ 298 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMVARIGKKNTFL 298 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHH
Confidence 34445578888888887777777777777778888888888776654444444455666677 67789999999999999
Q ss_pred HHHHHHHHHHHHHHHhh--hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCc-------cchhHhhhHHHHHHHHHHhh
Q 016048 311 FGLLFGCVHMFLYSVAW--SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASN-------EQGKAQGCISGICSFANLVS 380 (396)
Q Consensus 311 ~~~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~ 380 (396)
.+..+..++.+.+.+.+ +.+.... ..+.+++.+...+...++.+|..|++ ++|..+|+.+....+|..++
T Consensus 299 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 299 IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 99888888777666543 2232222 44567888888888999999988754 45999999999999999999
Q ss_pred hhhhhhhhhccc
Q 016048 381 PLAFSPLTGDCR 392 (396)
Q Consensus 381 ~~~~g~l~~~~~ 392 (396)
+.+.|.+++..+
T Consensus 379 ~~i~g~~l~~~G 390 (448)
T PRK09848 379 GSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHcC
Confidence 999999987654
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=1.2e-21 Score=173.27 Aligned_cols=260 Identities=10% Similarity=0.114 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-------------------
Q 016048 104 FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI------------------- 164 (396)
Q Consensus 104 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~------------------- 164 (396)
++.++++-++.|. |.+...+..+.++++..|+|++.+.+++.+..+++|..+||.+++.+
T Consensus 10 ~~~~l~~~f~~g~-G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLAS-GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHh-hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 8999999999999 99999999999999999999999999999999999999999998742
Q ss_pred -hhHHHHHHHHHHHHHHHHH-HHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHH
Q 016048 165 -STSAAFQAATAGSIISAVY-MRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFS 242 (396)
Q Consensus 165 -~~~~~f~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (396)
.|+++|++.+.+..+..+. .+..+||.++++++ +... ++..+.++ ..++|.++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~--------------------~~~~-~~~~~~~~----~~~~~~~~ 143 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA--------------------RVSS-GDTTQKTS----AFQFTHLV 143 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc--------------------cccc-ccccchhh----HHhhHHHH
Confidence 4788888666665544432 22333443221110 0000 00001111 12466777
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHhhhh--ccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 243 QAAIVAFLSNLADAGLQGSMMYYLKAK--FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
...+..+++.....+...|.+.|+.+. +|+++.+.+...+....+.++++ ++.+++.||+++|+.+..+..+..++.
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 777777888878889999999999864 69999999999999999999999 788899999999999888887777776
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 321 FLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
++....+.....+...+++++.+..+|...+...+..| ++.+++.++. .+..+|+.+.|.+.|.+.|...
T Consensus 223 ~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 223 IGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 65555444434444566788899999999999999888 4567777775 6778999999999999999754
No 108
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=5.6e-22 Score=181.47 Aligned_cols=367 Identities=32% Similarity=0.533 Sum_probs=274.3
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcch-hHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECS-LAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
...+....++..+++++..+..........|....+.+ .+....+.-.....+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 44566778888888888887777776664443322211 22222233333446788899999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhh-hccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAM-VCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~-~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
..+.+......+.. |++++ +.++ ++.+.......++++|...+++|...+++.+.....+..++|.+++..
T Consensus 100 ~~~~l~~~~~~~~~-----~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~ 171 (463)
T KOG2816|consen 100 FGTILPALCLLFQG-----YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL 171 (463)
T ss_pred HHHHHhHHHHHHHH-----HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99988888777765 23333 4444 233566678889999999999999999999999999999999998876
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccc-ccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCCh
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYT-PILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSP 239 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (396)
+.-..|.+..+..++..+..++++||+..++++.+ ...+...+.. ...+..+..+...+ .+.+|
T Consensus 172 ~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~r 240 (463)
T KOG2816|consen 172 VKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSL----------DSSHVADAFQSLTK-VGPDR 240 (463)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcc----------cchhhhhhhhhhcc-cCCCc
Confidence 66778999999999999999999999876655321 0000000000 00000011111111 22344
Q ss_pred hHHHHHHHHHHHHHhhhh-hhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAG-LQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
....++...+.......+ ....++.|++.+++++..+.+.+.+..+....+++++..+.+...++.|+.+..|.....+
T Consensus 241 ~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~ 320 (463)
T KOG2816|consen 241 LLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFL 320 (463)
T ss_pred cchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHH
Confidence 454444444444433332 3325578888999999999999999999999999988878899999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 319 HMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
....+++..+.|..+...+.........|...+..+...+++++|+++++...+..+...++|.+.+.++..+.
T Consensus 321 ~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 321 QLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTL 394 (463)
T ss_pred HHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 99999999999999998888888899999999999999999999999999999999999999999999987653
No 109
>PTZ00207 hypothetical protein; Provisional
Probab=99.90 E-value=1.6e-21 Score=183.10 Aligned_cols=342 Identities=11% Similarity=0.065 Sum_probs=236.1
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhc------cCchhHHHHHHHHHH
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYS------RSRNFFYAYYVLRTL 113 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l 113 (396)
+++++.+..+.+++.++.. ....++++.|+++||+|||+++.++.+++.++.++++++ ++ ++.+++.|++
T Consensus 54 ~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l 129 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGL 129 (591)
T ss_pred HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHH
Confidence 4466777788888887743 445677789999999999999999999999999999987 45 8999999999
Q ss_pred HhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHH-HHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 114 TAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVC-GTISARFI--STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 114 ~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
.|+ +.+...+.....+.+++| ++||++.|+.....++|..+ +++...++ +|+..|++.+++.++..++.+.++++
T Consensus 130 ~G~-G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 130 MTL-GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHH-HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 999 888888888999999997 78999999999999999875 55555555 78888999888888887777677665
Q ss_pred CCCCc---------ccccccccc-----------------------------------h---------------------
Q 016048 191 SVRDE---------DLYTPILSS-----------------------------------K--------------------- 205 (396)
Q Consensus 191 ~~~~~---------~~~~~l~~~-----------------------------------~--------------------- 205 (396)
+|... ++++.+++. .
T Consensus 208 p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~ll 287 (591)
T PTZ00207 208 PPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLT 287 (591)
T ss_pred CcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 54211 111110000 0
Q ss_pred ---h----------------hhhhhhhhhhh------hhhh------hc-cCCChh-HHhhhhcCChhHHHHHHHHHHHH
Q 016048 206 ---A----------------EISASCEESTK------KLQV------FK-RLPSID-DMVHLLKSSPTFSQAAIVAFLSN 252 (396)
Q Consensus 206 ---~----------------~~~~~~~~~~~------~~~~------~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
+ +.+.++.+..+ +++. .+ ...... ..++.+ ++..+|.+++..++..
T Consensus 288 l~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l-~~~d~Wll~~~~~cg~ 366 (591)
T PTZ00207 288 VIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGL-KTARLWCLLWSIFCCV 366 (591)
T ss_pred HHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHH-hchhHHHHHHHHHHhh
Confidence 0 00000000000 0000 00 000000 233333 4678999999998888
Q ss_pred HhhhhhhhhHHHHhhhhccccccc--hhhHHHHHHHHHHHHHHHHHHhhhhhhcch--------h-HHHHHHHHHHHHHH
Q 016048 253 LADAGLQGSMMYYLKAKFHFNKNQ--FADLMVIAGIAGTISQLIMMPVLAPTVGEA--------R-LLSFGLLFGCVHMF 321 (396)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--------~-~~~~~~~~~~i~~~ 321 (396)
.........+.+..+..-|.+.+. ...+.++.++.+.+|+ +.+|.+.....+| + .+.+..+ +.++.+
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GR-l~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~l 444 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGR-LCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITML 444 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhH-HHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHH
Confidence 877777777777766543553322 2337788999999999 7777766222211 2 2333344 566666
Q ss_pred HHHHhhh-hhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhh-hhhhhhhhhcc
Q 016048 322 LYSVAWS-SWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVS-PLAFSPLTGDC 391 (396)
Q Consensus 322 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~-~~~~g~l~~~~ 391 (396)
++....+ .......++.|+++|..++.....++|++. ++-|+-+-+.....-+|+.+- -.++|.++|.-
T Consensus 445 ll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~e 515 (591)
T PTZ00207 445 TLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQ 515 (591)
T ss_pred HHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544 344445778899999999999999999999 999998888887777877776 67888888864
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=6.7e-20 Score=169.43 Aligned_cols=363 Identities=12% Similarity=0.073 Sum_probs=226.1
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-CCchhhh
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALLT 82 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~~ 82 (396)
++.++.++.......++.......+|.|+.+ +++.+..+.+.+.+.+.....++.+++|+++||+ ||||++.
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~-------~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il 80 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTN-------QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM 80 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 3456667778888888888888888988765 3567778899999999999999999999999999 9999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcc--cchhHHHHHHHhhhhhhHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPG--RRASVFGIFSGIVSGAFVCGTIS 160 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~ 160 (396)
++.++..++.++.+..++. ...+.++..+..+ +.|...+...++++|.+|++ +|...+++.....++|..++|.+
T Consensus 81 iG~il~~lg~lll~~~~~~--~~~~~l~l~li~i-G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 81 LGALLMAIGHVVLGASEIH--PSFLYLSLAIIVC-GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHH-hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 9999999998777654321 2223334334444 55666677789999999976 68889999999999999999999
Q ss_pred HHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc--ccccccccchhhh----------------hhhhhhhhhh
Q 016048 161 ARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDE--DLYTPILSSKAEI----------------SASCEESTKK 218 (396)
Q Consensus 161 ~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~l~~~~~~~----------------~~~~~~~~~~ 218 (396)
.+++ +||+.|.+.++..++..+.. +..++...+. .+++..++.+... ......+...
T Consensus 158 ~g~L~~~~Gw~~~F~iaaigm~l~li~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (493)
T PRK15462 158 CGYAQEEYSWAMGFGLAAVGMIAGLVIF-LCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWS 236 (493)
T ss_pred HHHHHhhhChHHHHHHHHHHHHHHHHHH-HHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8876 79999988765443333322 2222111110 0000010000000 0000000000
Q ss_pred h---------------hhhccCCChhHHhhhhcCChh--HHHHHHHHHHHHHhhhhhhhhHHHHhhhhc-----cccccc
Q 016048 219 L---------------QVFKRLPSIDDMVHLLKSSPT--FSQAAIVAFLSNLADAGLQGSMMYYLKAKF-----HFNKNQ 276 (396)
Q Consensus 219 ~---------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~ 276 (396)
. ...+.+.+..| |+|- +..+++...+....+....+.+..|.+++. |++- .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~e------r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p 309 (493)
T PRK15462 237 VYALIVATIIGLGVLAKIYRKAENQKQ------RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTV-P 309 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceee-C
Confidence 0 00000011111 1111 222233333444444455556666766543 3332 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhc--chh-----HHHHHHHHHHHHHHHHHHhh---------h-hhHHHHHHHHH
Q 016048 277 FADLMVIAGIAGTISQLIMMPVLAPTVG--EAR-----LLSFGLLFGCVHMFLYSVAW---------S-SWVPYAAAVFS 339 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~-----~~~~~~~~~~i~~~~~~~~~---------~-~~~~~~~~~~~ 339 (396)
..+..+.+.+..++..++++ ++-.|.. +|. =...++++.+++++.+.... + .|......+..
T Consensus 310 ~~~~qslNp~~ii~l~P~~a-~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLA-WVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHH-HHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 46777888888888885554 4434442 221 15677788888877765421 1 23333356668
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHH-HHHHHhhhhhhh
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGIC-SFANLVSPLAFS 385 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~~~~~~g 385 (396)
++.-+..|...+.++++.|++.+|..+|...... .+|..++..+.+
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999885433 455555544444
No 111
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.88 E-value=2.4e-21 Score=181.18 Aligned_cols=361 Identities=11% Similarity=0.014 Sum_probs=236.4
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccC-----CchhhhH
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYG-----RKALLTV 83 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~~~~ 83 (396)
.+....+..++. +.....++.++. ++++++..+.+...+...+...+-.+ +|+++||++ ||+.+++
T Consensus 30 ~~~~~y~~qGl~-~l~~~~~~~~l~-------~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~ 100 (468)
T TIGR00788 30 IGLQVLFVKGIA-GLMRLPLSPMLT-------DDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVL 100 (468)
T ss_pred HHHHHHHHhhHH-HHhhhhhhHHHH-------HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHH
Confidence 334455666666 555555555543 35788889999999999999998655 999999998 7777777
Q ss_pred HHHHhH-HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhH---HHHHHHhhhhhhHHHHH
Q 016048 84 PITLSI-IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASV---FGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~~ 159 (396)
+.++.. +.....+..++ ......+..++.++ +.+...++..++..|..+ |++... .+......++|.++|+.
T Consensus 101 ~~~l~~~~~~~~l~~~~~--~~~~~~~~~~l~~~-~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~ 176 (468)
T TIGR00788 101 SGLLGSAILYGLLPGKVS--SAKVAAAFIFLAAL-AKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSL 176 (468)
T ss_pred HHHHHHHHHHHhcccccc--hHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHH
Confidence 776663 43333333334 13444458889998 888888999999999998 554443 23333344578888887
Q ss_pred HHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhh
Q 016048 160 SARFI----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLL 235 (396)
Q Consensus 160 ~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
+++.+ +|+..|++.+++.++. .....++||+++....+. ++.+.. .......... +..++..++..+.+
T Consensus 177 l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~--~~~~~~--~~~~~~~~~~--~~~~~~~~~l~~~l 249 (468)
T TIGR00788 177 LGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRI--GTYLEM--NMALLTLGVL--ANVKVQILGLRGAI 249 (468)
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccccccccccc--cccchh--hhhhhhhhHH--HHHHHHHHHHHHHH
Confidence 77764 7999999988888776 344577788642111000 000000 0000000000 00011133444443
Q ss_pred cCChhHHHHHHHHHH-HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHH
Q 016048 236 KSSPTFSQAAIVAFL-SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLL 314 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 314 (396)
++|.++...+..++ ...... .......+..+..|+++.+.|......+++.+++. ...+++.+|++.|+++..+.+
T Consensus 250 -~~~~i~~~l~fifl~~~~~~~-~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~~l~~~~~ 326 (468)
T TIGR00788 250 -QLLEIAKPLIFIFLSYANLPG-ASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRLLFGVTTL 326 (468)
T ss_pred -hcHHHHHHHHHHHHHHhhcCC-CCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHHHHHHHHH
Confidence 45666654444444 222211 11111113345679999999999999999999999 666788899999999999998
Q ss_pred HHHHHHHHHHHh----------hhhhHHH-HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhh
Q 016048 315 FGCVHMFLYSVA----------WSSWVPY-AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLA 383 (396)
Q Consensus 315 ~~~i~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 383 (396)
+.+++.+..... ++.+... ...+.+++.+..+.....++.+.+|++++|+.+++.+.+.++|..+++.+
T Consensus 327 l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 327 LYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 888876543211 1111122 24455677777888889999999999999999999999999999999999
Q ss_pred hhhhhhccc
Q 016048 384 FSPLTGDCR 392 (396)
Q Consensus 384 ~g~l~~~~~ 392 (396)
+|.+.++.+
T Consensus 407 gg~l~~~~g 415 (468)
T TIGR00788 407 GVLLMETIG 415 (468)
T ss_pred HHHHHHHcC
Confidence 999998865
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.3e-21 Score=160.73 Aligned_cols=331 Identities=11% Similarity=0.078 Sum_probs=224.8
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc-cCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK-YGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVC 118 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 118 (396)
+.+.+++.++..++.++|.....+...++|++.|| +|-|..-++-+....++.++.+.-.-...+|....+|++.|+ |
T Consensus 71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGI-G 149 (459)
T KOG4686|consen 71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGI-G 149 (459)
T ss_pred hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeecc-C
Confidence 44566777788899999999999999999999996 588777666666666777666543222229999999999999 6
Q ss_pred cchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hh------HHHH---HHHHHHHHHHHHHHH
Q 016048 119 EGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----ST------SAAF---QAATAGSIISAVYMR 185 (396)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~------~~~f---~~~~~~~~~~~~~~~ 185 (396)
+-..-.+...+...|++.|+.+.++|+......+|..+--.+..++ +- +... ...........+...
T Consensus 150 gESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slica 229 (459)
T KOG4686|consen 150 GESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICA 229 (459)
T ss_pred chhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666778899999999999999999999988888866543333322 10 1111 111111111111010
Q ss_pred HhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHH
Q 016048 186 IFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYY 265 (396)
Q Consensus 186 ~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (396)
.-+--+.++.| +.++ .++....+..++.+. ..-+|.+|.+.+..++...+..-+...-|.+
T Consensus 230 l~lg~~D~rAe--rilh--------------~e~g~~Ge~pkLtdv---~~f~ppfw~~~iicv~yyva~fPFi~lg~~f 290 (459)
T KOG4686|consen 230 LSLGLSDDRAE--RILH--------------LEEGFLGEEPKLTDV---NTFYPPFWVLVIICVLYYVAWFPFITLGPMF 290 (459)
T ss_pred HHhhhhhhHHH--HHHh--------------hhcCcccCCcccccc---cccCccHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 11100000000 0000 000000011111111 1125778888888888888777778888999
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHH-HHHHHHHHHHhhhhhHHH-HHHHHHHhhh
Q 016048 266 LKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLF-GCVHMFLYSVAWSSWVPY-AAAVFSILSV 343 (396)
Q Consensus 266 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~-~~~~~~~~~~ 343 (396)
.++++|+|+..++.+.+.....+.+.. .+.|.++||.|++.....+..+ ...+-..+.+. .+..+ .+.++|..+.
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHH
Confidence 999999999999999998888888888 6668999999998765554433 33333333222 22233 3666788888
Q ss_pred hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 344 FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
..-...+..++.++|+++.|++.|.++.++++|-.+.|.+.|.+.|.-++
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 87788889999999999999999999999999999999999999987653
No 113
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=7.2e-19 Score=164.44 Aligned_cols=338 Identities=11% Similarity=0.012 Sum_probs=218.6
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccc----cCCchhhhH-HHHHhHHH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK----YGRKALLTV-PITLSIIP 91 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~~~~-~~~~~~~~ 91 (396)
......+....+..+..+ ..++++...|.+..+.-+--++.-|+.|.++|| +||||.+++ +.+..+++
T Consensus 21 ~~~~~~~~~~~l~~fyt~-------~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~ 93 (460)
T PRK11462 21 SHIIFDNVMLYMMFFYTD-------IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIV 93 (460)
T ss_pred hhHHHHHHHHHHHHHHHH-------hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHH
Confidence 344444555555555444 568889999999999999999999999999995 798776665 66777777
Q ss_pred HHHHHhccCc---hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-cccchhHHHHHHHhhhhhhHHHHHHHHH----
Q 016048 92 LAILAYSRSR---NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-PGRRASVFGIFSGIVSGAFVCGTISARF---- 163 (396)
Q Consensus 92 ~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~---- 163 (396)
..++...++. ..+..+.+...+..+ +.........++.+|.++ ++||++..++...+..+|..+++.+...
T Consensus 94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~-~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 94 CVLAYSTPDLSMNGKMIYAAITYTLLTL-LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666555431 113445566666676 667777778889999987 7899999999998888887776555322
Q ss_pred h-------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhc
Q 016048 164 I-------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLK 236 (396)
Q Consensus 164 ~-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
. +|+....+.+++.+++..+.+...+|.+++++ ++.+.++.++...
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---------------------------~~~~~~~~l~~~~ 225 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---------------------------TTTSMREDLRDIW 225 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc---------------------------cCCCHHHHHHHHh
Confidence 2 35555555555555544444344444322111 1123455555555
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
++|.++..+...++.............+|.+...|.+. ..+.++....+..+++. ++++++.||+++|+....+....
T Consensus 226 ~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 226 QNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGS-ALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHHHHHHHH
Confidence 77777766666555555544444555555555444333 34556667778888888 77789999999988876554443
Q ss_pred HHHHHHHHHhhhh---hHHHHHHHHHHhhhhhhhhhhHHHhhccC-------CccchhHhhhHHHHHHHHHHhhhhhhhh
Q 016048 317 CVHMFLYSVAWSS---WVPYAAAVFSILSVFSHPCLRTIVSKQVA-------SNEQGKAQGCISGICSFANLVSPLAFSP 386 (396)
Q Consensus 317 ~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 386 (396)
.+..+++.+.+.. ......++.+++.+...+..+++..|..+ .+..|...+..+....+|..+++.+.|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 304 AVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333232221 11222334455556666667778887776 3334556677778999999999999999
Q ss_pred hhhcc
Q 016048 387 LTGDC 391 (396)
Q Consensus 387 l~~~~ 391 (396)
+++..
T Consensus 384 iL~~~ 388 (460)
T PRK11462 384 MLAYG 388 (460)
T ss_pred HHHHc
Confidence 99874
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.4e-19 Score=159.98 Aligned_cols=351 Identities=14% Similarity=0.080 Sum_probs=261.8
Q ss_pred HHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc----ccCCchhhhH-HHHH
Q 016048 13 TIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD----KYGRKALLTV-PITL 87 (396)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~~~~-~~~~ 87 (396)
+-+...+........+..+..| .+++++...|.+..+.-+--++.-|+.|.++| |+||+|.+++ +.+-
T Consensus 20 gd~~~~~~~~~~~~yLl~fYTd-------v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip 92 (467)
T COG2211 20 GDFASNFAFGIVVLYLLFFYTD-------VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP 92 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHhc-------ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence 3344444555555566666444 57899999999999999999999999999999 5888665555 7688
Q ss_pred hHHHHHHHHhccC---chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-cccchhHHHHHHHhhhhhhHHHHHHHH-
Q 016048 88 SIIPLAILAYSRS---RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-PGRRASVFGIFSGIVSGAFVCGTISAR- 162 (396)
Q Consensus 88 ~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~- 162 (396)
.++...++-.+++ .......++...+.++ +.........++.+|+++ ++||.+..+.-+...++|.++...+..
T Consensus 93 ~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l-~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 93 FAIVAVLLFITPDFSMTGKLIYALVTYMLLGL-GYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHcCCCcccCcchHHHHHHHHHHHH-HHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877774 1224556677788888 777777778888999886 688999999998888888665433322
Q ss_pred ---Hh-------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHh
Q 016048 163 ---FI-------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMV 232 (396)
Q Consensus 163 ---~~-------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
.+ +|+..-.+.+++..+..+..++..+|.+.+.++ .+++.+.++++.+
T Consensus 172 lv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~----------------------~~~~~~~~~~~~~ 229 (467)
T COG2211 172 LVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQP----------------------TKTGVKLKLKDSF 229 (467)
T ss_pred HHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcccc----------------------CcccccccHHHHH
Confidence 22 456666666666666666666777776543221 1112344666666
Q ss_pred hhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHH
Q 016048 233 HLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFG 312 (396)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 312 (396)
...++||.+...++...+.........+...+|.+...|.+.......+.......+++. ++.+++.+|+|+|++...+
T Consensus 230 ~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~~gkk~~~~~~ 308 (467)
T COG2211 230 LLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKKFGKKKLFLIG 308 (467)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhchHHHHHHH
Confidence 666688888888888877777777778888888888888888777777776666666666 7778999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh--hHHHH-HHHHHHhhhhhhhhhhHHHhhccC-------CccchhHhhhHHHHHHHHHHhhhh
Q 016048 313 LLFGCVHMFLYSVAWSS--WVPYA-AAVFSILSVFSHPCLRTIVSKQVA-------SNEQGKAQGCISGICSFANLVSPL 382 (396)
Q Consensus 313 ~~~~~i~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~ 382 (396)
.++.+++.+++.+.+.. +..++ .++.+++.+...+..+++++|..+ .+..|...|..+++..+|.+++..
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 99999998888877632 22233 355578888999999999999875 345688999999999999999999
Q ss_pred hhhhhhhcccCC
Q 016048 383 AFSPLTGDCRFS 394 (396)
Q Consensus 383 ~~g~l~~~~~~~ 394 (396)
+.|++++..+..
T Consensus 389 ~~g~~L~~~Gyv 400 (467)
T COG2211 389 IPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHcCCC
Confidence 999999886543
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.86 E-value=1.9e-18 Score=151.66 Aligned_cols=326 Identities=16% Similarity=0.132 Sum_probs=245.1
Q ss_pred CcchhHHHHHHHHHHHHhHHHHhhhhcccccccccC-----CchhhhH-HHHHhHHHHHHHHhc-----c-----C-chh
Q 016048 41 DECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYG-----RKALLTV-PITLSIIPLAILAYS-----R-----S-RNF 103 (396)
Q Consensus 41 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~~~~-~~~~~~~~~~~~~~~-----~-----~-~~~ 103 (396)
.|++++.+..+...+...+.+. ..+.+|+.+|+.+ ||..+++ +.++...+..+..++ . + ...
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 3678899999999999888766 5889999999999 8887777 555555555444432 2 0 111
Q ss_pred H--HHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-h---h-H--HHHHHHH
Q 016048 104 F--YAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-S---T-S--AAFQAAT 174 (396)
Q Consensus 104 ~--~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-~---~-~--~~f~~~~ 174 (396)
. ....+...+.|+ +.+...+...++++|..|||+|+++.++...+.-+|.+++..+.+.+ . . | ..+...+
T Consensus 87 ~g~~~a~l~F~l~G~-G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 87 LGLALAALAFLLYGL-GVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHh-hHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 2 234567778898 88888899999999999999999999999999999999999888865 1 1 2 2233333
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHh
Q 016048 175 AGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLA 254 (396)
Q Consensus 175 ~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (396)
++.....++. .+-.|++.++.. +..++++.++++.++.+..+|+.++.+...++....
T Consensus 166 ~i~~~l~~ia-~wg~E~r~~~~~---------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a 223 (403)
T PF03209_consen 166 LIALLLNLIA-LWGQEPRRSRRA---------------------AAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLA 223 (403)
T ss_pred HHHHHHHHHH-HHhcccCCcccc---------------------cCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHH
Confidence 3333333333 222343322220 122334456666666666888888888888888888
Q ss_pred hhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhh-hhcchhHHHHHHHHHHHHHHHHHHhh---hhh
Q 016048 255 DAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAP-TVGEARLLSFGLLFGCVHMFLYSVAW---SSW 330 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~i~~~~~~~~~---~~~ 330 (396)
+..-...+=+|--+.+|++..+...+....+.+..++. ...+++.. |.++++....++....+++.++.... +.+
T Consensus 224 ~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~ 302 (403)
T PF03209_consen 224 FFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPW 302 (403)
T ss_pred HHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 88888888899999999999999999999999999988 44455544 77888888888888888877765543 334
Q ss_pred HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 331 VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 331 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..-. .+++|++.+.......+...+..++++.|...|.....+.++..++..++|.+.|..
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333 677899999999999999999999999999999999999999999999999998853
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.83 E-value=3.7e-19 Score=160.77 Aligned_cols=364 Identities=19% Similarity=0.177 Sum_probs=243.3
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCC-chhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGR-KALL 81 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~~ 81 (396)
++|.++...+..++.....+++.|..-.|.++. |.+.+....|++.++..++.+++++..|++..|.++ |+.+
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl 105 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL 105 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH
Confidence 345677778889999999999999998887662 234455688999999999999999999999999997 9999
Q ss_pred hHHHHHhHHHHHHH-HhccCch-hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHH
Q 016048 82 TVPITLSIIPLAIL-AYSRSRN-FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTI 159 (396)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 159 (396)
+.+.++..++.++. +...-.+ ..+.++++|++.|+ |.+. .....+|+++....++|.++++....+..+|..+||.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gv-g~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGV-GVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-Cccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 99999999999988 4432222 37889999999999 7555 4678999999999999999999999999999999998
Q ss_pred HHHHh------h-----------hHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhh
Q 016048 160 SARFI------S-----------TSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVF 222 (396)
Q Consensus 160 ~~~~~------~-----------~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (396)
+...+ | +..+-|+.+++.++..++..++++|.++..++++..+. ++++.+.+
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~-----------~~~~~~~~ 252 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV-----------EEEKSDIE 252 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-----------hhhccchh
Confidence 88665 1 13466788888888888888889998765542111000 00000101
Q ss_pred ccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccch----hhHHHHHHHHHHHHHHHHHHh
Q 016048 223 KRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQF----ADLMVIAGIAGTISQLIMMPV 298 (396)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 298 (396)
+.+.+..| .+......+..+...+.+....+..+......++++.+++ +...+..++..+...+.. ..
T Consensus 253 ~~~~~~~d-------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~-~f 324 (488)
T KOG2325|consen 253 KVKKPKLD-------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLY-IF 324 (488)
T ss_pred hhccCChh-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHH-HH
Confidence 11111111 1223334444455555555556666777777778877664 344444444444444222 11
Q ss_pred hh-hhhcchhHHHHHHHHHHHHHHHH--HHh--hh---------------------------hhHHHH--HHHHHHhhhh
Q 016048 299 LA-PTVGEARLLSFGLLFGCVHMFLY--SVA--WS---------------------------SWVPYA--AAVFSILSVF 344 (396)
Q Consensus 299 l~-~~~g~~~~~~~~~~~~~i~~~~~--~~~--~~---------------------------~~~~~~--~~~~~~~~~~ 344 (396)
.. .++.+|+.+..++........+. .+. .. .+.... .+++|.+.-.
T Consensus 325 ~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~ 404 (488)
T KOG2325|consen 325 TRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPF 404 (488)
T ss_pred HHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheecccccc
Confidence 11 23334444444433333332222 111 00 000111 1223444444
Q ss_pred hhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 345 SHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 345 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
......++.+|...|+++++++|+.+.....+..++|.+...++...+.
T Consensus 405 ~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~ 453 (488)
T KOG2325|consen 405 ISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGP 453 (488)
T ss_pred ccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCc
Confidence 5567888999999999999999999999999999999999888876643
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.79 E-value=8.6e-21 Score=178.18 Aligned_cols=372 Identities=16% Similarity=0.234 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
.+++..++.....+.....++.+ ++.+++++++.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.
T Consensus 7 ~~~~~~~~q~~~~g~~~~~ltti--------ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~ 78 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTI--------ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLM 78 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHH
Confidence 34444555555555555555555 7789999999999999999999999999999999988888888899999
Q ss_pred HHHHHHHHhc----cC-------------------------------------------chhHHHHHHHHHHHhhhccch
Q 016048 89 IIPLAILAYS----RS-------------------------------------------RNFFYAYYVLRTLTAMVCEGS 121 (396)
Q Consensus 89 ~~~~~~~~~~----~~-------------------------------------------~~~~~~l~~~r~l~G~~~~~~ 121 (396)
+++.+++++= .. ...++.++++.++.|+ |...
T Consensus 79 ~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~Gi-G~~p 157 (539)
T PF03137_consen 79 GLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGI-GATP 157 (539)
T ss_dssp -------------------------------------------------------------------------SS-S---
T ss_pred HHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhc-cccC
Confidence 9998877631 00 0025778899999999 9999
Q ss_pred hhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--------------------------hhHHHHHHHHH
Q 016048 122 IHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--------------------------STSAAFQAATA 175 (396)
Q Consensus 122 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--------------------------~~~~~f~~~~~ 175 (396)
.++...+|+-|..++++-+..+|++.....+|.++|-++++.. .||..|.+.+.
T Consensus 158 l~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~ 237 (539)
T PF03137_consen 158 LYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGI 237 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988887642 15667777777
Q ss_pred HHHHHHHHHHHhcCCCCCCccc-ccccccchhhhhhhhhhh-hhhhhh---hccCCChhHHhhhhcCChhHHHHHHHHHH
Q 016048 176 GSIISAVYMRIFLPESVRDEDL-YTPILSSKAEISASCEES-TKKLQV---FKRLPSIDDMVHLLKSSPTFSQAAIVAFL 250 (396)
Q Consensus 176 ~~~~~~~~~~~~~~e~~~~~~~-~~~l~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (396)
+.++..+.. +..|+..++.++ ++..+..+.+.++.+++. .+.++. .+..+++.+..+.+.+||.+....+...+
T Consensus 238 ~~~l~aipl-~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~ 316 (539)
T PF03137_consen 238 LLFLSAIPL-FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVF 316 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHH
Confidence 777766655 444544332211 110000000100000000 000000 11111222222334478888888888888
Q ss_pred HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhc--chhHHHHHHHHHHHHHHHH---HH
Q 016048 251 SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVG--EARLLSFGLLFGCVHMFLY---SV 325 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~---~~ 325 (396)
......++.+++|-|++.+|+.++++++.+.....+.......+++|++.+|++ .|+.+....+...++.+.+ .+
T Consensus 317 ~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~ 396 (539)
T PF03137_consen 317 ESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFF 396 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHe
Confidence 888899999999999999999999998888877777555555588899999874 4555444444444443321 11
Q ss_pred h--h---------hh---------------------------------------hHHH-H-HHHHHHhhhhhhhhhhHHH
Q 016048 326 A--W---------SS---------------------------------------WVPY-A-AAVFSILSVFSHPCLRTIV 353 (396)
Q Consensus 326 ~--~---------~~---------------------------------------~~~~-~-~~~~~~~~~~~~~~~~~~~ 353 (396)
. + .. .... + .++..+..+..........
T Consensus 397 ~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~ 476 (539)
T PF03137_consen 397 LGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLIT 476 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheee
Confidence 0 0 00 0001 1 1111223344445566667
Q ss_pred hhccCCccchhHhhhHHHHHH-HHHHhhhhhhhhhhhc
Q 016048 354 SKQVASNEQGKAQGCISGICS-FANLVSPLAFSPLTGD 390 (396)
Q Consensus 354 ~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~ 390 (396)
-+.+|+++|+.|.|+...+.+ +|.+-+|+++|.++|.
T Consensus 477 LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 477 LRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------
T ss_pred eccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 789999999999999987766 8899999999999996
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.76 E-value=5.5e-16 Score=138.89 Aligned_cols=370 Identities=14% Similarity=0.082 Sum_probs=243.2
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-CCchhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALL 81 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~ 81 (396)
+.|.++.++..-+...++++-....+..|+..+..++ ++.+.++..-+.+.|..-.-+...++|+++||+ |+|+.+
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 4567888999999999999877778888888766433 777777777777777776677788999999997 999999
Q ss_pred hHHHHHhHHHHHHHHhcc--CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcc--cchhHHHHHHHhhhhhhHHH
Q 016048 82 TVPITLSIIPLAILAYSR--SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPG--RRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g 157 (396)
..+.++..+|.++.+.+. + ...++++-.+.++ |.|..-+...+++.|.+|++ +|...++++..+.++|..++
T Consensus 96 ~lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~i-G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSG---PGGLYIGLALIIV-GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred HHHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHh-ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH
Confidence 999999999999999884 5 6778888899999 99999999999999999865 46777888899999999999
Q ss_pred HHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCC----CCCCcccccc-cccchh-----------hh-hh---hhh
Q 016048 158 TISARFI----STSAAFQAATAGSIISAVYMRIFLPE----SVRDEDLYTP-ILSSKA-----------EI-SA---SCE 213 (396)
Q Consensus 158 ~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e----~~~~~~~~~~-l~~~~~-----------~~-~~---~~~ 213 (396)
|++.+++ +|+..|...++-..+..+.. ...+. ++..++.... .++... .. .. .+.
T Consensus 172 p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 250 (498)
T COG3104 172 PIITGLLAINYGWHVGFGLAAVGMIIGLVIF-LLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNT 250 (498)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH-HHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9888876 78888888777666554433 22222 1111111000 000000 00 00 000
Q ss_pred hhh---------hh---hhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccc----ccch
Q 016048 214 EST---------KK---LQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFN----KNQF 277 (396)
Q Consensus 214 ~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~ 277 (396)
... +. .+..+.++...| . +|-.....+++.....+..+....+.+..|..+..+.+ .-..
T Consensus 251 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~e-r---~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~ 326 (498)
T COG3104 251 FSGVLLVISILIAIIYFAEAFRSPKVFDE-R---RRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPP 326 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCccHHH-H---HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCH
Confidence 000 00 000000110111 0 01112223333333444444444555666665533222 1234
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhcch-------hHHHHHHHHHHHHHHHHHHh-------h---h-hhHHHHHHHHH
Q 016048 278 ADLMVIAGIAGTISQLIMMPVLAPTVGEA-------RLLSFGLLFGCVHMFLYSVA-------W---S-SWVPYAAAVFS 339 (396)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-------~~~~~~~~~~~i~~~~~~~~-------~---~-~~~~~~~~~~~ 339 (396)
.+..+.+.+..++..++++ ++..|.+++ .-...+..+++.+++++... . + .|.....++..
T Consensus 327 ~~fQslNp~~Iii~~pI~a-~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 327 AWFQSLNPFFIILFSPILA-ALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHhhCHHHHHHHHHHHH-HHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 6778888888888885554 555553322 12456666677776666554 1 1 22333356678
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
++.-+..|...+++.+..|+...+.++|..-.....++.++..+.+
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 8999999999999999999999999999888888888777766665
No 119
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=4.7e-17 Score=153.11 Aligned_cols=345 Identities=16% Similarity=0.192 Sum_probs=251.0
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc------------------Cc
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR------------------SR 101 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~------------------~~ 101 (396)
++.++++.++.|++.+.+-++..+...+..+..-|..|-|.+-++.++.+++.+++++=+ +.
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 567788888999999999999999999999999999999999999999999999887520 00
Q ss_pred -------------------------------hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhh
Q 016048 102 -------------------------------NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIV 150 (396)
Q Consensus 102 -------------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 150 (396)
..+..++++.++.|+ |....++...+|+-|...+++-...+|++....
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GI-G~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGI-GATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhc-CCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 013467889999999 999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhh
Q 016048 151 SGAFVCGTISARFI-----------------------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAE 207 (396)
Q Consensus 151 ~~g~~~g~~~~~~~-----------------------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~ 207 (396)
.+|.++|-+++++. .||..|++.+.+.++..+.. +++|...++.++++..++.+..
T Consensus 283 ~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~-f~fPk~lp~~~~~~~~~~~~~~ 361 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL-FFFPKELPKSQKRKRARDLHVL 361 (735)
T ss_pred HhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-HhCcccCccccccchhhhhccc
Confidence 99999999888864 26778888888888877766 5566554433321111100000
Q ss_pred hhhhhhhhhhhhhhhccCCChhH---HhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHH
Q 016048 208 ISASCEESTKKLQVFKRLPSIDD---MVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIA 284 (396)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 284 (396)
..++ ...++..+..+..+| ..+.+.++|.+....+...+....+.++.+++|-|++++||.+++.+..+....
T Consensus 362 k~~~----~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i 437 (735)
T KOG3626|consen 362 KTES----GGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSI 437 (735)
T ss_pred cccc----ccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhh
Confidence 0000 000011111112222 223344789999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhhhhhhc--chhHHHHHHHHHHHHHHHHH---Hh---------------------h-h---------
Q 016048 285 GIAGTISQLIMMPVLAPTVG--EARLLSFGLLFGCVHMFLYS---VA---------------------W-S--------- 328 (396)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~---~~---------------------~-~--------- 328 (396)
++.......+++|++.+|+. .|.......+...+.++.+. +. . .
T Consensus 438 ~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~ 517 (735)
T KOG3626|consen 438 GVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSD 517 (735)
T ss_pred hhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcC
Confidence 88877777789999999874 45555555544444444311 10 0 0
Q ss_pred ---------------------------------------------hh-----------------------HHHHHHHHH-
Q 016048 329 ---------------------------------------------SW-----------------------VPYAAAVFS- 339 (396)
Q Consensus 329 ---------------------------------------------~~-----------------------~~~~~~~~~- 339 (396)
.. ..++.++++
T Consensus 518 C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~s 597 (735)
T KOG3626|consen 518 CSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGS 597 (735)
T ss_pred CCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHH
Confidence 00 011122222
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHHhhhhhhhhhhhc
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FANLVSPLAFSPLTGD 390 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~ 390 (396)
+..+...+..+.++-+.+|+|+|.-+.|+..++.+ +|.+-+|.++|+++|.
T Consensus 598 f~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 598 FIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 22334456677778889999999999999988766 8999999999999996
No 120
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.70 E-value=6.9e-15 Score=129.72 Aligned_cols=324 Identities=12% Similarity=0.010 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCc---hhHH--HHHHHHHHHhhhccc
Q 016048 46 AIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSR---NFFY--AYYVLRTLTAMVCEG 120 (396)
Q Consensus 46 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~l~G~~~~~ 120 (396)
+....-|..-+|.+.+....+++-|+.||+|-|...+++..+..++..+-..+..+ +.++ ....+..+.+. +.-
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~-Aq~ 155 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA-AQP 155 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH-hhh
Confidence 44456788899999999999999999999999999999999999999988877554 3345 66778888887 666
Q ss_pred hhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----------hhHH--HHHHHHHHHHHHHHHHHHhc
Q 016048 121 SIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----------STSA--AFQAATAGSIISAVYMRIFL 188 (396)
Q Consensus 121 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----------~~~~--~f~~~~~~~~~~~~~~~~~~ 188 (396)
........+-.-|+|+++|..+..+-..+..+|..+|.++...+ .|.. .|+...++..+..++..+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~ 235 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF 235 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65555567778899999999999888888778877776665543 3433 35544444444444454555
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhh
Q 016048 189 PESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKA 268 (396)
Q Consensus 189 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (396)
+|.|+..... . .......+..+..+...+++++..+.+++......+++..+.+..-+..
T Consensus 236 ~~~P~tPps~-------------------s-~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~ 295 (480)
T KOG2563|consen 236 TKKPPTPPSA-------------------S-QAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP 295 (480)
T ss_pred CCCCCCCCch-------------------h-HhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc
Confidence 5544432210 0 0000012233333333368888888888887777777777666644444
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcch-hHHHHHHHHHHHHHHHHHHhh----h-hhHHHHHHHHHHhh
Q 016048 269 KFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEA-RLLSFGLLFGCVHMFLYSVAW----S-SWVPYAAAVFSILS 342 (396)
Q Consensus 269 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~i~~~~~~~~~----~-~~~~~~~~~~~~~~ 342 (396)
. |.+...+|.......+.++++. .+.|.+.||.+.- ...........++...+.... . ........+++.+.
T Consensus 296 s-gY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 296 S-GYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred c-cCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 3 7777888999999999999999 7788999998753 344444444444422222111 1 22223356678888
Q ss_pred hhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 343 VFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 343 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
....|....+..|..-|..-++..|+.+..+++-+++-..+.+...+...
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 88899999999998877888999999999999999888888887776543
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.63 E-value=1.3e-13 Score=119.55 Aligned_cols=270 Identities=13% Similarity=0.095 Sum_probs=175.9
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
.....+...+..+..|.+-...+ +.+.+..+++.+........++..++.|.++||+|||+.-+..+++.++
T Consensus 40 l~vY~La~~aDWLQGpY~Y~LY~--------~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLYALYE--------SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHhhcchhHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 44555667777788887665532 4567778899999999999999999999999999999999999999988
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHH-hcC----CCcccchhHHHHHH-HhhhhhhHHHHHHHHHh
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYV-ADN----VPPGRRASVFGIFS-GIVSGAFVCGTISARFI 164 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~~ 164 (396)
+++ +-.+++ ++.++++|++.|+ +.+....+-.++. .|+ +|++..+..++... ...++-.+.+..++..+
T Consensus 112 scl-~k~~~~---~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 112 SCL-TKHSSN---YPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHH-HHhccc---cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 886 445567 9999999999999 8888888888875 444 23333333333322 22222233344444433
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCC
Q 016048 165 ------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSS 238 (396)
Q Consensus 165 ------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
+...+|....++.++..+++...-+|...+.++ ..+.....++..+.++++
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~-----------------------~~~~~~~~~~a~~~i~~d 243 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSS-----------------------SSSLSGSFREAWRAILSD 243 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCccc-----------------------ccchHHHHHHHHHHHHcC
Confidence 236789888888887777665556665433220 011112344555566678
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhh-hhhcchhHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLA-PTVGEARLLSFGLLFGC 317 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~~~ 317 (396)
|+++.+.++..+.-...+.+....++-++.. + .....|.+++...+..++|+. +.+++. ++......+.....+.+
T Consensus 244 ~ril~LG~~qslFE~smy~FVflWtPaL~~~-~-~~~P~GlIFssFM~a~MlGS~-lf~~l~s~~~~~e~~l~~v~~~aa 320 (354)
T PF05631_consen 244 PRILLLGLIQSLFEGSMYLFVFLWTPALDPD-D-EELPLGLIFSSFMVAMMLGSS-LFSRLLSKSLRPESLLRYVFAVAA 320 (354)
T ss_pred chhHHHHHHHHHHHHHHHHheeeeeceecCC-C-CCCCchHHHHHHHHHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHH
Confidence 8888888877777766665544444444421 1 223469999999999999994 444444 44333344444344333
Q ss_pred HH
Q 016048 318 VH 319 (396)
Q Consensus 318 i~ 319 (396)
++
T Consensus 321 ~~ 322 (354)
T PF05631_consen 321 VS 322 (354)
T ss_pred HH
Confidence 33
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=1.8e-15 Score=117.88 Aligned_cols=132 Identities=25% Similarity=0.373 Sum_probs=116.8
Q ss_pred HHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCC
Q 016048 55 AIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV 134 (396)
Q Consensus 55 s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 134 (396)
+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++ ++.+.+.+++.|+ +.+...+....++.|..
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGF-GAAFALVAGAALIADIY 80 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHhHHHHHHHHC
Confidence 3456788899999999999999999999999999999988888888 8899999999999 88888899999999999
Q ss_pred CcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 135 PPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
|+++|++.++..+....+|..++|.+.+.+ +|++.+++.+...++..+...+..||
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999888876 68899988888877777666666665
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.60 E-value=2.4e-14 Score=132.61 Aligned_cols=188 Identities=12% Similarity=0.079 Sum_probs=142.7
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
++.+.+..++............|.+..+........-+.+..+.+...++..++..++.++.|+++||+|||+++..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~ 289 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV 289 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 33445555555444444555556665542100000012445678999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhcc-CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHH-HhhhhhhHHHHHHHHHh
Q 016048 87 LSIIPLAILAYSR-SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFS-GIVSGAFVCGTISARFI 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~~ 164 (396)
+.+++..+..... +...++.+++.+++.|+ +.+...+....++.|++|+++|++++++.+ ...++|..+||.+++.+
T Consensus 290 ~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~-~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 290 AWALRFGFFAYGDPEYFGYALLFLSMIVYGC-AFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHHHcCcchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9988877776643 21124667788999999 888888888999999999999999999997 67889999999999864
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 016048 165 ----------STSAAFQAATAGSIISAVYMRIFLPESVRDE 195 (396)
Q Consensus 165 ----------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~ 195 (396)
+|+..|.+.+++.++..++.++++||+.+.-
T Consensus 369 ~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 369 VEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 3788999998888888888888899875543
No 124
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.55 E-value=1.1e-13 Score=128.27 Aligned_cols=171 Identities=19% Similarity=0.279 Sum_probs=136.2
Q ss_pred HHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHH
Q 016048 12 ITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIP 91 (396)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~ 91 (396)
...+......+...+.+|.+..+... +.+......+.+.++..++..++.+..|+++||+|||+.+..+..+..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 301 (408)
T PRK09874 226 VTTLIIQVATGSIAPILTLYVRELAG----NVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHH
Confidence 33344445555666777877666321 11222334677778888899999999999999999999999998888888
Q ss_pred HHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhH
Q 016048 92 LAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STS 167 (396)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~ 167 (396)
.+...+.++ .+.+++.+++.|+ +.+...+...+.+.|..|+++|++.++..+....+|..+||.+++.+ +|+
T Consensus 302 ~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~ 377 (408)
T PRK09874 302 LIPMSFVQT---PLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFR 377 (408)
T ss_pred HHHHHHhcc---HHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchh
Confidence 877777777 7888889999999 88888899999999999999999999999999999999999998875 789
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 016048 168 AAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 168 ~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
..|++.+++.++..+..++..++
T Consensus 378 ~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 378 AVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888877766555444
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=1e-13 Score=131.31 Aligned_cols=166 Identities=13% Similarity=0.074 Sum_probs=116.0
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHH--
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAI-- 94 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~-- 94 (396)
...........+|.+..+. .+.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..+....
T Consensus 262 ~~~~~~~~~~~~p~~l~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 334 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHN-------LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAF 334 (490)
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3344445556677776542 3444456677778888999999999999999999999988877654433322
Q ss_pred -HHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHH
Q 016048 95 -LAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSA 168 (396)
Q Consensus 95 -~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~ 168 (396)
...+++ ...+++++++.|+ +.+........++.|.+|++.|++.++.......++..++|.+.+++ +|+.
T Consensus 335 ~~~~~~~---~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~ 410 (490)
T PRK10642 335 ILINSNV---IGLIFAGLLMLAV-ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMM 410 (490)
T ss_pred HHHhCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 223344 6777888999887 66666677788899999999999999975444455556677776654 3676
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 169 AFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 169 ~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
+++...+.+++..+.. +++||+|++
T Consensus 411 ~~~~~~~~~~i~~~~~-~~~pes~~~ 435 (490)
T PRK10642 411 PAYYLMVVAVIGLITG-VTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHHH-HHhccccCC
Confidence 7666666555555544 567999875
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=5.3e-14 Score=130.88 Aligned_cols=158 Identities=11% Similarity=0.048 Sum_probs=127.7
Q ss_pred chhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHH
Q 016048 27 AITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYA 106 (396)
Q Consensus 27 ~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (396)
..|.+..+.. .+.+.+..+.|++.++..++..++.++.|+++||+|||+.+..+.++.+++..+.+++++ .+.
T Consensus 245 ~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~---~~~ 317 (420)
T PRK09528 245 QFPNFFASFF----ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG---PLE 317 (420)
T ss_pred HHHHHHHHHH----hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc---HHH
Confidence 3566655432 112344567899999999999999999999999999999999999999999888888888 888
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHH-HHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHH
Q 016048 107 YYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGI-FSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISA 181 (396)
Q Consensus 107 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~ 181 (396)
+++.+++.|+ +.+...+....++.|..|++.|+...+. ++....+|..++|.+.+.+ ||+..|...+++.++..
T Consensus 318 ~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~ 396 (420)
T PRK09528 318 VSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFT 396 (420)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHH
Confidence 8899999998 7777777788999999999998877655 5667788999998888875 88999999888887766
Q ss_pred HHHHHhcCCCC
Q 016048 182 VYMRIFLPESV 192 (396)
Q Consensus 182 ~~~~~~~~e~~ 192 (396)
++.+..+++++
T Consensus 397 ~~~~~~~~~~~ 407 (420)
T PRK09528 397 LISVFTLSGDR 407 (420)
T ss_pred HHHHHHhcCCc
Confidence 66656666543
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=1.1e-13 Score=134.48 Aligned_cols=140 Identities=21% Similarity=0.201 Sum_probs=119.1
Q ss_pred HHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHH
Q 016048 49 LSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLA 128 (396)
Q Consensus 49 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 128 (396)
...+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++ ...+++.+++.|+ ..+..++...+
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s---~~~ll~~~~l~g~-~~~~~~~~~~a 671 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS---ESAMIALLCLFGG-LSIAAWNALDV 671 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3456677778999999999999999999999999999999999999999888 7778888888888 77778889999
Q ss_pred HHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 016048 129 YVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI---STSAAFQAATAGSIISAVYMRIFLPESVR 193 (396)
Q Consensus 129 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 193 (396)
+++|++|.++|++++|+......+|.++||.+++.+ +...+|++.+++.++.+++. .++||+..
T Consensus 672 ~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~-~~LPET~~ 738 (742)
T TIGR01299 672 LTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLA-LKLPDTRG 738 (742)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HhCCCCcc
Confidence 999999999999999999999999999999998865 33567777777766655544 56788654
No 128
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=8.4e-13 Score=121.59 Aligned_cols=152 Identities=13% Similarity=0.078 Sum_probs=129.5
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
.+|.++.+.+..++..........++|.|+++++|+++.+.++..+...+...+.+ +..|+++||+|||+.+..+....
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS-LGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCcchhHHHHHHHH
Confidence 34567777778888888888888899999999899999999999999999999999 77789999999999999999888
Q ss_pred HHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 317 CVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 317 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
.++.+++.+.++.+.... ..+.+.+.+...+...++..|..|+++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776655444 2334555566678889999999999999999999999999999999999998875
No 129
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.50 E-value=1.5e-12 Score=120.61 Aligned_cols=340 Identities=14% Similarity=0.146 Sum_probs=208.2
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-----CCchhhhHHHHHhHHHHHHHHhccC-chhHHHHHHHHHH
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-----GRKALLTVPITLSIIPLAILAYSRS-RNFFYAYYVLRTL 113 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l 113 (396)
++++++++.+.....+...+...+ -+++|.++|.+ .||+-++++.++..++....+..+. ..+.....+.-++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 446778888888888877777665 57899999976 3555666677777666665655433 1225556666777
Q ss_pred HhhhccchhhHHHHHHHhcCCC--cccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHh
Q 016048 114 TAMVCEGSIHCLSLAYVADNVP--PGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIF 187 (396)
Q Consensus 114 ~G~~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~ 187 (396)
..+ +......+..+.+.|... +++|+...+.......+|.+++..+++.+ +++..|.+.+.+..+..+...+.
T Consensus 96 a~~-g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 96 ASF-GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHH-HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 777 778888899999999874 33467778888888889999988888776 66888888888877776666566
Q ss_pred cCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHH-HHHHHHHhhhhhhhhHHHHh
Q 016048 188 LPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAI-VAFLSNLADAGLQGSMMYYL 266 (396)
Q Consensus 188 ~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 266 (396)
.+|.+++++ .+..... ++ +........++..++.++.+ +++.++...+ ..++.............++.
T Consensus 175 ~~e~~~~~~-~~~~~~~-------~~--~~~~~~~~~~~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~ 243 (433)
T PF03092_consen 175 LEERKVRPA-DEVFSFG-------KE--EVPCLFGSFREQLSELWRAL-QQRAIWQPILFFIFFFNLPPSISSASSFYFQ 243 (433)
T ss_pred hhhcccccc-chhhccc-------cc--ccchhhHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHhccCCCCccEEEEE
Confidence 666222111 1000000 00 00000000111233333334 3455554444 22222222111111011222
Q ss_pred hhhcc---ccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHH----------hhhhhHHH
Q 016048 267 KAKFH---FNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSV----------AWSSWVPY 333 (396)
Q Consensus 267 ~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~ 333 (396)
.+..+ +++...+.+..+..++.+++. .+..+...+..-|+++....++.++..+.-.. .++.+...
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~-~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGI-LLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 33345 888888888877777777777 44344444556667766666555443332110 01112112
Q ss_pred H-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 334 A-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 334 ~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
. ..+........+-....+++|++|+...|+.+++...+.++|..++..++..+.+.++-
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~v 383 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGV 383 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 34445555666667778899999999999999999999999999999999998887653
No 130
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.49 E-value=1.1e-10 Score=104.27 Aligned_cols=320 Identities=13% Similarity=0.089 Sum_probs=204.6
Q ss_pred HHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhc
Q 016048 53 QQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVAD 132 (396)
Q Consensus 53 ~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~ 132 (396)
+.-+..-.++...++...+.|..+.|++++++.+...+...+..+.++ ...+-+..++.|+ +.+. ..+..+++-.
T Consensus 46 i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~-~~a~-evay~sYiys 120 (412)
T PF01770_consen 46 IYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS---VLAMQLMQFFYGL-ATAA-EVAYYSYIYS 120 (412)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHH-HHHH-HHHHHHHhee
Confidence 333445566777788999999999999999999999999999999999 9999999999998 6444 5778899999
Q ss_pred CCCcccchhHHHHHHHhhhhhhHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCc---ccc---cc
Q 016048 133 NVPPGRRASVFGIFSGIVSGAFVCGTISARFI------STSAAFQAATAGSIISAVYMRIFLPESVRDE---DLY---TP 200 (396)
Q Consensus 133 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~---~~~---~~ 200 (396)
..|+++-.++.+...+..-+|..++.++|..+ +.+...++......+..+ ..+++|..++.. ++. +.
T Consensus 121 ~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~-~~~fLP~~~~S~~f~r~~~~~~~ 199 (412)
T PF01770_consen 121 VVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL-IALFLPMPKRSLFFHRKPPAEQD 199 (412)
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHcCCCCcccceeccCccccc
Confidence 99999999999999999999988888888765 345555555554444444 336788765421 100 00
Q ss_pred cccchhhhhhhhhhh--hhhhhhhccCC--------ChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh-
Q 016048 201 ILSSKAEISASCEES--TKKLQVFKRLP--------SIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK- 269 (396)
Q Consensus 201 l~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 269 (396)
.++.+.+..++.++. +.++++...+. -+++..+.. ++|.+....+=..+...++....++......+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y-~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~ 278 (412)
T PF01770_consen 200 ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCY-SNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVP 278 (412)
T ss_pred cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 000001100000000 00001111111 122222223 455555544444444555555555555555443
Q ss_pred -ccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchh--HHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHhhhhh
Q 016048 270 -FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEAR--LLSFGLLFGCVHMFLYSVAWSSWVPYAA-AVFSILSVFS 345 (396)
Q Consensus 270 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 345 (396)
-+-+..-.|.+-+...+.+.++. +..|++..+..+.. .+....++.+..++++....+.|..... +++...+...
T Consensus 279 ~~~~~~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fl 357 (412)
T PF01770_consen 279 PSDNESVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFL 357 (412)
T ss_pred CCCCCcccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 12333345777777777788777 66677755554433 3344445566667777777788877774 4456667777
Q ss_pred hhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhh
Q 016048 346 HPCLRTIVSKQVASNEQGKAQGCISGICSFANLVS 380 (396)
Q Consensus 346 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 380 (396)
.+.....++.....|.-|-.+|+.+++..+-..+-
T Consensus 358 iTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 358 ITIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HHHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 78888888888888889999998887776555443
No 131
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=6.3e-13 Score=122.49 Aligned_cols=163 Identities=16% Similarity=0.187 Sum_probs=122.2
Q ss_pred HHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHH
Q 016048 15 FVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAI 94 (396)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~ 94 (396)
+............+|.+.++ +++.+..+.|+..+...++.+++.++.|+++||+|||+.+..+.....+....
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~-------~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIIN-------ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 33333344444566777554 34566677888888878888889999999999999999888777666665555
Q ss_pred HHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHH
Q 016048 95 LAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAF 170 (396)
Q Consensus 95 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f 170 (396)
....++ .+.+++.+++.++ +.+...+....+..|..| ++|++++++++...++|..+||.+++.+ +|+..|
T Consensus 299 ~~~~~~---~~~~l~~~~l~~~-~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~ 373 (393)
T PRK15011 299 MLMAHS---PAILLGLQLLNAI-YIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVF 373 (393)
T ss_pred HHHHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 555666 6777788888887 667666777788899988 4699999999888899999999888875 788888
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 016048 171 QAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~e 190 (396)
++..++.++..+.. ++.||
T Consensus 374 ~~~~~~~~~~~~~~-~~~~~ 392 (393)
T PRK15011 374 WFALVMIIATLFCL-LRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHH-HhhcC
Confidence 88777776655544 45565
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.46 E-value=1e-12 Score=121.48 Aligned_cols=160 Identities=17% Similarity=0.176 Sum_probs=125.5
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA 96 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~ 96 (396)
..++.....+.+|.+..+. +. ...++..+.+.++..++.++.|++.||+|||+.+..+..+.+++..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 228 ASIGFGTIATFITLYYAAR--------GW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHHHHHHHHHHHHHc--------cc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 3444444555666665442 11 1335566778888899999999999999999999999888888888888
Q ss_pred hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHH
Q 016048 97 YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQA 172 (396)
Q Consensus 97 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~ 172 (396)
+.++ .+.+++.+++.|+ +.+...+.....+.|..|+++|+++.++++....+|..++|.+.+.+ +|+..|++
T Consensus 298 ~~~~---~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 298 LAPS---PWMALIGAALTGF-GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred Hhcc---HHHHHHHHHHHHH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 8877 7778888999999 88888888888888999999999999999999999988888777765 78999998
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 016048 173 ATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 173 ~~~~~~~~~~~~~~~~~e~ 191 (396)
.+++.++..+..++ ++++
T Consensus 374 ~~~~~~~~~~~~~~-~~~~ 391 (399)
T PRK05122 374 AALAALLGLALTWL-LYRR 391 (399)
T ss_pred HHHHHHHHHHHHHH-hccc
Confidence 88877776665544 4443
No 133
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=6.6e-13 Score=126.43 Aligned_cols=145 Identities=12% Similarity=0.070 Sum_probs=108.1
Q ss_pred cccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchh
Q 016048 24 VAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNF 103 (396)
Q Consensus 24 ~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
..+.+|.+.++ +.+.+..+.+++.+...++..++.++.|+++||+|||+++..+..+..+..+......+. .
T Consensus 294 ~~~~lp~~l~~-------~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-~ 365 (496)
T PRK03893 294 IQALLPTYLKT-------DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGA-N 365 (496)
T ss_pred HHHHHHHHHHh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcccc-H
Confidence 34567777544 456777889999999999999999999999999999999998877766665544443331 1
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHH
Q 016048 104 FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGS 177 (396)
Q Consensus 104 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~ 177 (396)
.+...+..++.+. ......+...+++.|.+|+++|++.+++......+|..+||.+++.+ +|+..+...+...
T Consensus 366 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 366 VWVLGLLLFFQQM-LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHHHHHHH-HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 3444455555544 33334566778899999999999999999999999999999998876 5666665544433
No 134
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=1.6e-13 Score=128.68 Aligned_cols=164 Identities=13% Similarity=0.114 Sum_probs=126.4
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc--CCchhhhH-
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY--GRKALLTV- 83 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grk~~~~~- 83 (396)
++......++..++.......+|.+..+ .+.+..+.++..++..++..+++++.|+++||. ++|+...+
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKD--------KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 4444455556666666666667777543 356667889999999999999999999999984 34443333
Q ss_pred -HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 84 -PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
+.+..+++.++....++ ++.+++.+++.|+ +.+...+...+++.|.+|++++++.+++++...++|..+||.+++
T Consensus 315 ~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~-~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 315 FALLFNGLTHLLCALAGD---YTGLVIYCIFFGL-SFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHHHHHHHhch---HHHHHHHHHHHHH-HhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 33444455556667777 8888899999999 888888899999999999999999999999999999999999988
Q ss_pred Hh-----hhHHHHHHHHHHHHHHHH
Q 016048 163 FI-----STSAAFQAATAGSIISAV 182 (396)
Q Consensus 163 ~~-----~~~~~f~~~~~~~~~~~~ 182 (396)
.+ +|++.|++.+++.++..+
T Consensus 391 ~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 391 RLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeehhcCCcchHHHHhhHHHHHHHH
Confidence 65 488888888877665544
No 135
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.45 E-value=1.8e-12 Score=121.90 Aligned_cols=154 Identities=11% Similarity=0.105 Sum_probs=132.8
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh--ccccccchhhHHHHHHHHHHHHHHHHHHhhhhh-hcchhHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK--FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT-VGEARLLSFGL 313 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~ 313 (396)
+++.++.+....++..+.+++...++|.|+++. +|++..+++...+...+...++. +.+|+++|| +|||+++..+.
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~-~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLT-SVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhcchHHHHHHHH
Confidence 456667777777788889999999999999887 89999999999999999999999 788999999 89999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCcc---chhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 314 LFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNE---QGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 314 ~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~---~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
.+.+++.+++...++.+.... ..+.+++.+...|...++++|.+|+++ |+++.++.+...++|..++|.+.|++.+
T Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 87 IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988887765444433 455677888888999999999998764 8899999999999999999999999987
Q ss_pred cc
Q 016048 390 DC 391 (396)
Q Consensus 390 ~~ 391 (396)
+.
T Consensus 167 ~~ 168 (475)
T TIGR00924 167 NY 168 (475)
T ss_pred hc
Confidence 53
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.45 E-value=2e-12 Score=120.22 Aligned_cols=160 Identities=14% Similarity=0.096 Sum_probs=129.6
Q ss_pred cccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchh
Q 016048 24 VAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNF 103 (396)
Q Consensus 24 ~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
....+|.+.++ ..+.+..+.|++.+...++..++.++.+++.||.++|+.+..+.++.+++.++..+.++
T Consensus 242 ~~~~~p~~~~~-------~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--- 311 (417)
T PRK10489 242 VRVLYPALADE-------VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM--- 311 (417)
T ss_pred HHHhhHHHHHh-------ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch---
Confidence 34456767544 24556678899999999999999999999999988888888888888888888877777
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHH
Q 016048 104 FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSII 179 (396)
Q Consensus 104 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~ 179 (396)
.+...++.++.|+ +.+...+...+++.|..|+++|++++++......+|..+||.+.+.+ +.+..+...++..++
T Consensus 312 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 312 WILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 7777888889998 77777777889999999999999999999999999999999888876 556677777776666
Q ss_pred HHHHHHHhcCCCCCC
Q 016048 180 SAVYMRIFLPESVRD 194 (396)
Q Consensus 180 ~~~~~~~~~~e~~~~ 194 (396)
..++....+||.++.
T Consensus 391 ~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 391 IGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHhccccccc
Confidence 666666777776543
No 137
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.44 E-value=5.8e-13 Score=121.96 Aligned_cols=164 Identities=18% Similarity=0.187 Sum_probs=124.9
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
.+.+....+.............+.+.+ +.+.+..+.+...+...++..++.++.|+++||+|||+.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 278 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQ--------SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFG 278 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 333444444444444334444455532 234555678899999999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
+.+++.++..+.++.. ...++...++.|+ +.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 279 ISAVGMAAMLFIPMLN-DVLFLATVALVFF-TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHHHHHcccch-hHHHHHHHHHHHH-HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988888887776521 2334456777887 77777777888999999999999999999999999999999988765
Q ss_pred --hhHHHHHHHHHHHHHH
Q 016048 165 --STSAAFQAATAGSIIS 180 (396)
Q Consensus 165 --~~~~~f~~~~~~~~~~ 180 (396)
+|++.|.+.+++.++.
T Consensus 357 ~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhchhhHHHHHHHHHHHh
Confidence 7888888877766554
No 138
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.44 E-value=3.4e-12 Score=118.53 Aligned_cols=154 Identities=10% Similarity=0.151 Sum_probs=125.9
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-GEARLLSFGLLF 315 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~ 315 (396)
+++.++..+.......+.+++...++|.|+.+.+|+++.+++...........++. +++|+++||+ |||+.+..+.++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHH
Confidence 45667777777778888899999999999999899999999999998888888888 7889999999 999999999999
Q ss_pred HHHHHHHHHHhhh-hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCc--cchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 316 GCVHMFLYSVAWS-SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASN--EQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 316 ~~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..++.+++..... ...... ..+..++.+...+...+++.|.+|++ +|.++.++.+...++|+.++|.+.|++.+..
T Consensus 86 ~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~ 165 (493)
T PRK15462 86 MAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY 165 (493)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9888776654321 121222 33344666666777889999999976 6999999999999999999999999997653
No 139
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.44 E-value=2e-12 Score=118.49 Aligned_cols=172 Identities=16% Similarity=0.242 Sum_probs=127.0
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
+.+.+....++...........+|.+..+ +.+.+..+.|+..+.......++.++.|++.||+|||+.+..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIH-------ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHH-------HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHH
Confidence 33434444444444344444555666544 23455567788888777778888899999999999999998887
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++..+......+.++ .+.+++.+++.|+ +.+...+....++.|..|+ ++++++++.+....+|..++|.+++.+
T Consensus 273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 273 LAGVAFYTGLAADNS---LWALLMLQLLNAI-FIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666666666666 7777888999998 7787888888999999875 567999999999999999999888765
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 165 ---STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
+|+..|++.++..++..+.. .+++|
T Consensus 348 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 375 (375)
T TIGR00899 348 ERWSYHAVYWFAIVMLIVALFCL-LLIKD 375 (375)
T ss_pred HhccchhHHHHHHHHHHHHHHHH-heecC
Confidence 78889988888776665544 44443
No 140
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.44 E-value=1.1e-12 Score=118.92 Aligned_cols=167 Identities=22% Similarity=0.286 Sum_probs=144.6
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCch-hhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKA-LLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~-~~~~~~ 85 (396)
++...+..+.............|.+..+. .+.+..+.++..+...++..++.++.|++.||+|||+ .+..+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-------LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGL 249 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 34455566667777777777888886552 2556678899999999999999999999999999999 999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
.+..++.+.....++ .+...+..++.|+ +.+...+...+++.|..|+|+|++.++..+...++|..++|.+.+.+
T Consensus 250 ~~~~i~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 250 LLAALGLLLLALAPS---LALLLVALLLLGF-GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred HHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999888 8889999999999 88999999999999999999999999999999999999999998875
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH
Q 016048 165 ---STSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~ 184 (396)
+|+..+.+.+++.++..+..
T Consensus 326 ~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 326 DTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred cccCcchHHHHHHHHHHHHHHHh
Confidence 78899998888887766544
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.43 E-value=1.2e-12 Score=121.28 Aligned_cols=154 Identities=16% Similarity=0.133 Sum_probs=120.3
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccC
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRS 100 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
.......+|.+..+ .+.+..+.++..+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++
T Consensus 236 ~~~~~~~~p~~~~~--------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (406)
T PRK11551 236 LYFLLNWLPSLLVG--------QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS 307 (406)
T ss_pred HHHHHHHHHHHHHh--------CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33334445666433 3555667899999999999999999999999999999998877777777777777777
Q ss_pred chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHH
Q 016048 101 RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATA 175 (396)
Q Consensus 101 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~ 175 (396)
.+.+.+..++.|+ +.+...+...++..|.+|+++|++.+++.+....+|..+||.+++.+ +|...++....
T Consensus 308 ---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~ 383 (406)
T PRK11551 308 ---FAGMLLAGFAAGL-FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIP 383 (406)
T ss_pred ---HHHHHHHHHHHHH-HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHH
Confidence 7777778888888 76777788899999999999999999999999999999999999876 34455555555
Q ss_pred HHHHHHHHHHH
Q 016048 176 GSIISAVYMRI 186 (396)
Q Consensus 176 ~~~~~~~~~~~ 186 (396)
..++..+..+.
T Consensus 384 ~~~~~~~~~~~ 394 (406)
T PRK11551 384 VILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHH
Confidence 55554444433
No 142
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.42 E-value=2.6e-12 Score=121.20 Aligned_cols=167 Identities=16% Similarity=0.043 Sum_probs=116.4
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
++.+.+..++...........+|.|..+ +.+.+..+.++..+...++..++.+++|+++||+|||+.+.....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~-------~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~ 332 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQ-------ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 3444445555555444456677888655 356677788999999999999999999999999999988776554
Q ss_pred HhHHHHHHH--HhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhh-hhHHHHHHHHH
Q 016048 87 LSIIPLAIL--AYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSG-AFVCGTISARF 163 (396)
Q Consensus 87 ~~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~ 163 (396)
+..++..+. ...++ .+...+.+++.|+ ..............|..|+++|+.+.|+.+...++ |..++|.+.+.
T Consensus 333 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 333 LALIIFTLGVYQHATS---EYMYLASLFALGF-LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHhcCc---HHHHHHHHHHHHH-HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 444433222 23344 6666778888886 43333333346777999999999999999988886 66777766654
Q ss_pred h-h---------------hHHHHHHHHHHHHHHHHHH
Q 016048 164 I-S---------------TSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 164 ~-~---------------~~~~f~~~~~~~~~~~~~~ 184 (396)
+ + |+..|++..+..++..+..
T Consensus 409 i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 409 IADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 4 3 7888888766666655443
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=7.4e-12 Score=115.35 Aligned_cols=170 Identities=16% Similarity=0.160 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
+..+...++...........++.+..+. .+.+..+.+++.+...++..+++++.|+++||+|||+.... ..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~ 279 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQV-------AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IAL 279 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHH
Confidence 3333333333333333344556565442 34555678889999999999999999999999998876444 444
Q ss_pred hHHHH-HHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 88 SIIPL-AILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
..++. .+....++ .+.++++.++.|+ +.+...+...+.+.|..| ++|+++++..+....+|..+||.+++.+
T Consensus 280 ~~~~~~~l~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~ 354 (390)
T PRK03545 280 LLVCLLLLLPAANS---EWHLSVLSIFWGI-AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL 354 (390)
T ss_pred HHHHHHHHHHHhch---HHHHHHHHHHHHH-HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44443 33345566 7778888889998 766666777888888876 6889999999998999999999888875
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 165 --STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 165 --~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
+++..|+..+.+.++..+......++
T Consensus 355 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 355 HLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred ccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 78999999988888877766565543
No 144
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.40 E-value=9.1e-12 Score=114.94 Aligned_cols=148 Identities=12% Similarity=0.070 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
+.++...++.....+....+++.|++++.|+++.+.|...+...+...+.. ++.|+++||+|||+.+..+.....++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~-~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLG-IFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-hhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 445566677777777788889999988889999999999999999999988 7778999999999999999999999998
Q ss_pred HHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 322 LYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.+...++.+.... .++.+++.+...|...+++.|.+|+++|+++.|+.+....+|..++|.+.|.+.++
T Consensus 92 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 92 TMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887766655444 44557777777888899999999999999999999999999999999999998743
No 145
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=4.7e-12 Score=116.23 Aligned_cols=165 Identities=13% Similarity=0.127 Sum_probs=136.7
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
++++...+..++...+.....+..|.+.+| .+.+..+.|++.++..++..+..++.+++.||+|+|+.+.++
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--------~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~ 276 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--------AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLIS 276 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHH
Confidence 344555666677777777777788888643 466677889999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHH-HhhhhhhHHHHHHHHH
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFS-GIVSGAFVCGTISARF 163 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~ 163 (396)
.+...+.....+++++ .+.+++.+.+.|+ +.+...+....++.+. |+++|++..++++ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~-~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 277 AIACVGRWAIIGAIEA---FPLIFLLQILHCG-TFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHHHHHHHHHHHhHhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 8999999999999 8899999999999998 9999999999986 4678999999999988
Q ss_pred hhh---HHHHHHHHHHHHHHHH
Q 016048 164 IST---SAAFQAATAGSIISAV 182 (396)
Q Consensus 164 ~~~---~~~f~~~~~~~~~~~~ 182 (396)
+-. ...|+..+++.++..+
T Consensus 352 l~~~~g~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 352 IYPTLGAGTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHhccHHHHHHHHHHHHHHHH
Confidence 732 2456666666655433
No 146
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.39 E-value=1.7e-09 Score=98.57 Aligned_cols=362 Identities=17% Similarity=0.150 Sum_probs=200.6
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
|+..+.++...++...+..+.--..|.++.+..+. .+ . ..+...-.-.+..++.++..|.+.||..|+++...
T Consensus 1 ~~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~---sL-l---~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~ 73 (432)
T PF06963_consen 1 KRALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPG---SL-L---PVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRT 73 (432)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---Cc-H---HHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHH
Confidence 34567788999999999888888888887774321 11 1 22333333456678888999999999999998877
Q ss_pred HHHHhHHHHHHHH------hccC------chhHHHHHHHHHHHhhhccch-hhHHHHHHHhcC----C--CcccchhHHH
Q 016048 84 PITLSIIPLAILA------YSRS------RNFFYAYYVLRTLTAMVCEGS-IHCLSLAYVADN----V--PPGRRASVFG 144 (396)
Q Consensus 84 ~~~~~~~~~~~~~------~~~~------~~~~~~l~~~r~l~G~~~~~~-~~~~~~~~i~~~----~--~~~~r~~~~~ 144 (396)
+.+.--++..+.. +... ......+++.-.+.|. ..-. ......+.=.|| . +++++.+.++
T Consensus 74 ~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~-i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA 152 (432)
T PF06963_consen 74 SLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGA-IERLASIANTIAVERDWVVVIAGGDPGALARMNA 152 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHH-HHHHHHhhhhheeccchhhhhcCCChhhHHHHHH
Confidence 6655332222111 2111 1112222222222221 1111 111112222344 2 3445566666
Q ss_pred HHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhc-------CCCCCCcccccc-cccchhhhhhhh
Q 016048 145 IFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFL-------PESVRDEDLYTP-ILSSKAEISASC 212 (396)
Q Consensus 145 ~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~-l~~~~~~~~~~~ 212 (396)
.+.-.=-+..+++|++.+.+ +.+....+.++..++..+.-++++ |+=..++++++. ..+..++..+++
T Consensus 153 ~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~ 232 (432)
T PF06963_consen 153 TMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESS 232 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccccccccccccc
Confidence 66666667788888888776 455555555555555544432322 221111111000 000000000000
Q ss_pred h----hhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHH
Q 016048 213 E----ESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAG 288 (396)
Q Consensus 213 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 288 (396)
+ .....+...+....|+.++ +++.+.. .+...+..+...++......|+..+ |+++...|..-....+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~w~~Y~----~q~vfla-s~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~G 306 (432)
T PF06963_consen 233 SDPSILKRLWNPLRTIIRGWRTYF----RQPVFLA-SFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFG 306 (432)
T ss_pred chhhHHHHHHHHHHHHhccHHHHH----hCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHH
Confidence 0 0001111122233455544 4554443 3333344444455677778888887 999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH---Hhhh-h--hHHHHHHHHH-----HhhhhhhhhhhHHHhhcc
Q 016048 289 TISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS---VAWS-S--WVPYAAAVFS-----ILSVFSHPCLRTIVSKQV 357 (396)
Q Consensus 289 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~---~~~~-~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 357 (396)
+.++ .+.+++.+|+|..+.-..+......++.+-. +.+. + ......++.+ +|.=.......-+++|.+
T Consensus 307 l~gT-~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V 385 (432)
T PF06963_consen 307 LLGT-WVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENV 385 (432)
T ss_pred HHHH-HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccC
Confidence 9999 8889999999988876666665444333221 1111 1 1111122222 333344567778899999
Q ss_pred CCccchhHhhhHHHHHHHHHHhh
Q 016048 358 ASNEQGKAQGCISGICSFANLVS 380 (396)
Q Consensus 358 p~~~~g~~~g~~~~~~~~g~~~~ 380 (396)
|+++||+.+|+-+..+++...+.
T Consensus 386 ~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 386 PESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred CHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999988776654
No 147
>PRK12382 putative transporter; Provisional
Probab=99.37 E-value=6.8e-12 Score=115.70 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=126.2
Q ss_pred HhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHh
Q 016048 18 CFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAY 97 (396)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~ 97 (396)
...........|.+..+. +.+ ..++..+.+.++..+++++.|++.||+||||.+..+..+.+++.++..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 229 GVGFAVIGTFVSLYFASK--------GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHHHhHHHHHHHHHHHhc--------CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH
Confidence 344444555566665442 111 2355666778888999999999999999999999999999888888888
Q ss_pred ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHH
Q 016048 98 SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAA 173 (396)
Q Consensus 98 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~ 173 (396)
.++ .+.+++..++.|+ +.+...+...+.+.|.+|+|+|++++++.+....+|..+||.+.+.+ +|+..|.+.
T Consensus 299 ~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~ 374 (392)
T PRK12382 299 APT---AWVALAGAALTGA-GCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAG 374 (392)
T ss_pred ccc---HHHHHHHHHHHHH-HHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 887 7778889999998 87888888888899999999999999999999999999999888865 789999998
Q ss_pred HHHHHHHHHHHHHhcC
Q 016048 174 TAGSIISAVYMRIFLP 189 (396)
Q Consensus 174 ~~~~~~~~~~~~~~~~ 189 (396)
+++.++..+..+...+
T Consensus 375 ~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 375 AISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 8887777666544433
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=1.1e-11 Score=114.15 Aligned_cols=177 Identities=11% Similarity=0.066 Sum_probs=128.8
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
.+.+.+..++...+.......+|.+..+ .+.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~--------~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~ 278 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE--------IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALV 278 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHH
Confidence 3444445555555655666667777544 25566788999999999999999999999999999999999888
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-cccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-PGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
+..++..+....++. ...+. -++.|+ +.+...+.......|..+ +++|++.++..+....++..++|.+.+++
T Consensus 279 l~~~~~~~~~~~~~~--~~~~~--~~l~g~-g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 279 LQLVGFCGFIWLPLQ--LPVLW--AMVCGL-GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHHHHHHHccch--HHHHH--HHHHHH-hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777665543331 22222 245677 667777777767777775 67899999999999999999999998877
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESVRDED 196 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 196 (396)
+++..|.+..+..++..+......||++.++.
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 354 SISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 35667777777777766666677787765443
No 149
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.35 E-value=2e-11 Score=112.44 Aligned_cols=148 Identities=17% Similarity=0.145 Sum_probs=120.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|+++.+.+..++..+.........+... +.++.++.+.++..+...+...+.. ++.|++.||+|||+++..+..+..+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~-~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLA-PFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHH-hhhhHhhhccCCchhhHHHHHHHHH
Confidence 4566667777776665555555555554 4558888888999999999999999 7778999999999999999988887
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 319 HMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+.+......+. ...-++.+++.+...|...+++.|.+|+++|++++|+.+....++..+||.++|.+.++
T Consensus 81 ~~~~~~~~~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 81 GCLLMLFGIHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665554443 33345668888999999999999999999999999999999999999999999999875
No 150
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=2.4e-11 Score=114.40 Aligned_cols=154 Identities=11% Similarity=0.059 Sum_probs=130.1
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh-hcchhHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT-VGEARLLSFGLLF 315 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~ 315 (396)
++|.++..+...+...+.+++...+++.|+++.+|++..+.++....+.....+.. +++|+++|| +|||+++..+.++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHHHHH
Confidence 45677777788888889999999999999999999999998888888777777777 678999999 9999999999999
Q ss_pred HHHHHHHHHHhhhhhH-H-HHHHHHHHhhhhhhhhhhHHHhhccCCcc--chhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 316 GCVHMFLYSVAWSSWV-P-YAAAVFSILSVFSHPCLRTIVSKQVASNE--QGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 316 ~~i~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..++.+......+... . ....+.+++.+...|...+++.|.+|+++ |++++++.+...++|..++|.+.|++.++.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999888877654332 2 23455678888888999999999998874 578999999999999999999999998864
No 151
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.34 E-value=3e-11 Score=109.56 Aligned_cols=145 Identities=21% Similarity=0.284 Sum_probs=118.7
Q ss_pred HHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHH
Q 016048 246 IVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSV 325 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 325 (396)
+..++...........+|.++.+++|.++.+.++..+...+...+++ +..|++.||+|||+.+..+.++.+++.++..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFS-PFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHH-HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 34455555555666667757777789999999999999999999999 77789999999999999999999998555555
Q ss_pred hhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 326 AWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 326 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..+.+.... .++.+++.+...+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.++.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 148 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF 148 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc
Confidence 444443333 556688888999999999999999999999999999999999999999999998654
No 152
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.34 E-value=2e-11 Score=113.96 Aligned_cols=147 Identities=11% Similarity=0.144 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHH
Q 016048 243 QAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFL 322 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~ 322 (396)
..++..++..+........+|.+.++ +|+++.+.+...+...++..+++ +..|++.||+|||+.+..+.++..++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~ 104 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSK-FVSGIVSDRSNARYFMGIGLIATGIINIL 104 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 34444444444445566677777665 79999999999999999999999 77789999999999999999999999888
Q ss_pred HHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 323 YSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 323 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
....++.+.... .++.+++.+...+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+.+
T Consensus 105 ~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 105 FGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888777665544 344577777778899999999999999999999999999999999999999988754
No 153
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=2.8e-11 Score=113.95 Aligned_cols=167 Identities=20% Similarity=0.215 Sum_probs=134.8
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.+..+....++..+....+...+|.+..+ +++.++...|++.+++.+|.++++++.+++.+|+++++.+..+.
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~-------~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~ 291 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARD-------VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLAS 291 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHH-------HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHH
Confidence 34444444455555555566678888665 34556678899999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.+..+++++ .+..++.-++.|+ +.....+...+.+.+..|++.|||++++++.....+..+|..+.|.+
T Consensus 292 ~~~a~~~~~lal~~~---~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 292 LLFALALLLLALSPS---FWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHhcchH---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 8888889999998 88888888889999999999999999999888887777777777765
Q ss_pred ---hhHHHHHHHHHHHHHHHHH
Q 016048 165 ---STSAAFQAATAGSIISAVY 183 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~ 183 (396)
+-+..+.+.++..++..++
T Consensus 368 ~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 368 DHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHhCHHHHHHHHHHHHHHHHHH
Confidence 5667777766655544443
No 154
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.33 E-value=3.1e-11 Score=110.81 Aligned_cols=151 Identities=13% Similarity=0.049 Sum_probs=128.9
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
++.++.+....++...........+|.|.++ +|.|..+.|+..+...++..+++ +..|++.||+|||+.+..+..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~-~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGT-LLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557777777778888888888899999876 59999999999999999999999 677899999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 318 VHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 318 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++.....+.++.+.... .++.|++.+...|.......+..|+++|+++.+..+....+|..++|.+.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888887777665554 45557777777888888888889999999999999999999999999999988765
No 155
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=1.4e-11 Score=113.62 Aligned_cols=170 Identities=10% Similarity=0.026 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
+.+.+..++...........+|.+..+ +.+.+..+.+...+.+.++..++.++.|+++||+|||+.+.....+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~~l~~-------~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~ 280 (394)
T PRK03699 208 LFLAIAALLYILAQLTFISWVPEYAQK-------KFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 334445555555555556677888655 3456677889999999999999999999999999999999988877
Q ss_pred hHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh---
Q 016048 88 SIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI--- 164 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--- 164 (396)
..+...+....++ .+.+.+..++.|+ +.+...+...++..|..| +++++..+.......+|..++|.+.+.+
T Consensus 281 ~~~~~~~~~~~~~---~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 281 ALVLMYLFVNTDD---PSHLLYAILGLGF-FSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHHHcCC---chHHHHHHHHHHH-HHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 7777777667776 6666677788888 777777887888888776 5567788888888899999999988765
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 165 -STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 165 -~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
+++..++..+++.++..+.. ..+++
T Consensus 356 ~g~~~~~~~~~~~~~~~~~~~-~~~~~ 381 (394)
T PRK03699 356 FGLQAALLTANGLYAVVFVMC-ILLGF 381 (394)
T ss_pred hCchhhhhhhHHHHHHHHHHH-HHHHH
Confidence 77888888877777665543 34443
No 156
>PRK10504 putative transporter; Provisional
Probab=99.32 E-value=3.5e-11 Score=113.82 Aligned_cols=151 Identities=11% Similarity=0.006 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
+.++......++...........+|.+.++ +|.++.+.++..+...+...++. ++.|++.||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVML-PASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 455666667777777777778888988876 69999999999988888888888 7778999999999999988888888
Q ss_pred HHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 319 HMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.+.....++.+..+. ..+.+++.+...|...+.+.|.+|+++|+++.|+.+....+|..++|.+.|.+.++.
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~ 161 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc
Confidence 8777766655554444 556688888888999999999999999999999999999999999999999998764
No 157
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.32 E-value=7.7e-12 Score=118.36 Aligned_cols=149 Identities=16% Similarity=0.108 Sum_probs=111.5
Q ss_pred hhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHh---ccCch-----hHHHHHHHHHHHh
Q 016048 44 SLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAY---SRSRN-----FFYAYYVLRTLTA 115 (396)
Q Consensus 44 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~l~~~r~l~G 115 (396)
+.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.++.++ ..... ....+....++.+
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 315 GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 444456788888889999999999999999999999999998888887776662 11110 1223333333333
Q ss_pred hhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016048 116 MVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 191 (396)
. ......+....++.|.+|+++|++++++.+....+|..++|.+.+.+ +|++.|++.++++++..+...++.||+
T Consensus 395 ~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 395 F-FAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred H-HHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 3 22334466778889999999999999999999999999999887764 688889988888888777776677775
Q ss_pred CC
Q 016048 192 VR 193 (396)
Q Consensus 192 ~~ 193 (396)
++
T Consensus 474 ~~ 475 (481)
T TIGR00879 474 KG 475 (481)
T ss_pred CC
Confidence 54
No 158
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=4.7e-11 Score=111.19 Aligned_cols=178 Identities=19% Similarity=0.243 Sum_probs=143.9
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCc--hh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRK--AL 80 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk--~~ 80 (396)
|.+++...++..++..-+.+.+......|..+ +++.+..+...+.-+..+...+|++++|++.||+|.| ++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-------~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~ 351 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATE-------VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT 351 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 34556666777777777777777777777544 6677888888888889999999999999999999999 89
Q ss_pred hhHHHHHhHHHHHHHHh--------ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhh
Q 016048 81 LTVPITLSIIPLAILAY--------SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSG 152 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 152 (396)
+..+.++..+..+...+ .++ .+.+.+.-++.|+ ..|..++...++.+|..|+++.+..+|++....-.
T Consensus 352 l~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 352 LLISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 88888887555554444 445 6788889999999 99999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016048 153 AFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLPESV 192 (396)
Q Consensus 153 g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 192 (396)
...+||++-+.+ +.|+.+....++.++..++. ..+++++
T Consensus 428 ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~ 471 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchh
Confidence 999999998876 35888887777777666554 5555543
No 159
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.31 E-value=5.1e-11 Score=110.44 Aligned_cols=132 Identities=8% Similarity=-0.022 Sum_probs=113.4
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA- 334 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 334 (396)
.......| .+++++|++..+.++..+...++..+++ +..|++.||+|||+.+..+.++..++.++..+.++.+....
T Consensus 25 ~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (412)
T TIGR02332 25 INIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICG-IPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLL 102 (412)
T ss_pred hhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 33333344 6777889999999999999999999999 66689999999999999999999999988888777655544
Q ss_pred HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 335 AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
-++.|++.+...|....++.|.+|+++|+++.|+.+....+|..++|.+.+++.+
T Consensus 103 r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 103 RILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566888888889999999999999999999999999999999999999998874
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=3.3e-11 Score=109.85 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=121.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
.....++...........+|.|..+ .+.++.+.++..+...+...++. +..|++.||+|||+.+..+..+..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLS-PIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHH-HhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 3455555666666667777888776 48999999999999999999999 777899999999999999988888877777
Q ss_pred HHhh-----hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 324 SVAW-----SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 324 ~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.... +.+.... ..+.+++.+...+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6665 5454444 455578888888999999999999999999999999999999999999999988754
No 161
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.9e-11 Score=108.32 Aligned_cols=370 Identities=15% Similarity=0.123 Sum_probs=207.8
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc----ccCCchh
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD----KYGRKAL 80 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~ 80 (396)
+.+..+....+-..+++..-...+|+|+.+ .+++....+.+--...+...+.+|+.|..+| ||||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~--------lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS--------LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH--------cCCCcccccccccccccccceecccccccccccccccccccc
Confidence 344555666667777777777888888555 3444456677777778888999999999999 5899888
Q ss_pred hhH-HHHHhHHHHHHHHhccCch--------------hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchh-HHH
Q 016048 81 LTV-PITLSIIPLAILAYSRSRN--------------FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRAS-VFG 144 (396)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~-~~~ 144 (396)
++. +.....++..+.+++.+.. ....++++..+.=+ +.........+++.|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~-A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDV-ANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHh-hhhhhhhhHHHHHHHhccChhhhhccch
Confidence 777 5555667777777765421 12344555555666 666777889999999998777777 999
Q ss_pred HHHHhhhhhhHHHHHHHHHhhhHH--HHHHHHHHHHHHHHHHH-------HhcCCCCC--Ccccccccccchhhhhhhhh
Q 016048 145 IFSGIVSGAFVCGTISARFISTSA--AFQAATAGSIISAVYMR-------IFLPESVR--DEDLYTPILSSKAEISASCE 213 (396)
Q Consensus 145 ~~~~~~~~g~~~g~~~~~~~~~~~--~f~~~~~~~~~~~~~~~-------~~~~e~~~--~~~~~~~l~~~~~~~~~~~~ 213 (396)
.+....++|..+|..++.+.+|+- +|.....+-+.+..+-. +..+++.. ....++.++....+.+..
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~-- 260 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSK-- 260 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCccccccc--
Confidence 999999999999999998888753 33322222222221111 11111111 000000000000000000
Q ss_pred hhhhhhhhhccCCChhHHhh-hhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhh-hcccccc----------------
Q 016048 214 ESTKKLQVFKRLPSIDDMVH-LLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKA-KFHFNKN---------------- 275 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------------- 275 (396)
..+.....+.+. ..+.+|.++.+++...+.+++.....-+...++-+ .|+=++.
T Consensus 261 --------~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~ 332 (498)
T KOG0637|consen 261 --------SSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVR 332 (498)
T ss_pred --------ccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccc
Confidence 000000111111 12245778888888888877766665555555433 2322211
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HH------------------
Q 016048 276 QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AA------------------ 336 (396)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~------------------ 336 (396)
.-.+=+.++.+...+.+ ....++.||+|-|+.++.+.....++..+.+...+...... ..
T Consensus 333 ~G~~GL~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~ 411 (498)
T KOG0637|consen 333 MGCLGLMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALA 411 (498)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHH
Confidence 12333556777777777 55678999999555555444433344333333222111111 00
Q ss_pred ---HHHHhhhhhhhhhhHHHhhccCCc--cchhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 337 ---VFSILSVFSHPCLRTIVSKQVASN--EQGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 337 ---~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
..+.-....+.+.++..+...... -+|...|+.+..-.+...+.....|.+.+..+..
T Consensus 412 ~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~ 474 (498)
T KOG0637|consen 412 LYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGG 474 (498)
T ss_pred HHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCc
Confidence 011111222233333333222222 2366667777777788888888888888776543
No 162
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.31 E-value=6.9e-11 Score=111.93 Aligned_cols=155 Identities=15% Similarity=0.106 Sum_probs=123.4
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh-hcchhHHHHHHH
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT-VGEARLLSFGLL 314 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~ 314 (396)
++++.++..+...++..+.+++...+++.|+++.+|++..+.+.............. +++|++.|| +|||+.+..+.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchHHHHHHHHH
Confidence 345568888888888889999999999999999999999888777766555545444 577999999 599999999999
Q ss_pred HHHHHHHHHHHhhh-hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCcc--chhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 315 FGCVHMFLYSVAWS-SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNE--QGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 315 ~~~i~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+..++..++.+..+ .+.... ..+.+++.+...+...++..|.+|+++ ++.+.++.+...++|..++|.+.|++.|+
T Consensus 97 ~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~ 176 (500)
T PRK09584 97 VLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK 176 (500)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988887776543 222222 355677778788888899999998654 45688888999999999999999999886
Q ss_pred c
Q 016048 391 C 391 (396)
Q Consensus 391 ~ 391 (396)
.
T Consensus 177 ~ 177 (500)
T PRK09584 177 Y 177 (500)
T ss_pred h
Confidence 4
No 163
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.30 E-value=2.4e-09 Score=95.85 Aligned_cols=323 Identities=16% Similarity=0.115 Sum_probs=178.5
Q ss_pred HHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHH
Q 016048 50 SGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAY 129 (396)
Q Consensus 50 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 129 (396)
.|.+.-+..+...+..+.+.++.+|...+.=.....+++.++.++.+++++ .+.=+++-.+.++ +.|........+
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~-ssg~GE~tfL~l 136 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASL-SSGLGEVTFLSL 136 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhh-hhhhhHHHHHHH
Confidence 344555566677777778888999998766667777788899999999998 8888899999998 777776666665
Q ss_pred HhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccc
Q 016048 130 VADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSS 204 (396)
Q Consensus 130 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~ 204 (396)
.. .+++ ...+-+..+.+.+.++|+..-..+ +.|..+.....++++..+..++.+|+++.+++..+.-.+.
T Consensus 137 t~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~ 211 (402)
T PF02487_consen 137 TH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED 211 (402)
T ss_pred HH-hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC
Confidence 44 5553 345667777777777776544332 4477788877777766665556666543322111100000
Q ss_pred hhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhH-HHHh-hhhccccccchhhHHH
Q 016048 205 KAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSM-MYYL-KAKFHFNKNQFADLMV 282 (396)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~g~~~~~~~~~~~ 282 (396)
+.+++..+++..+.+++...+.++++-++.+ |.+...++-.+...+..+.++.-+ +... .....-..++..++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~---k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~ 288 (402)
T PF02487_consen 212 EAEDDLLESETSESKPDSSSKLSFKEKLKRL---KPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQL 288 (402)
T ss_pred cccccccccccccccccccchhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHH
Confidence 0000000000011111111222333322222 222222222233333333332222 2221 1222222345566667
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH---HhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccC
Q 016048 283 IAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS---VAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVA 358 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p 358 (396)
.+.++..+++ -... +. |+.+.+.+..-..+..+.+++-. +.++.|..+. ++.-|+..|..+.-.+..+.|..|
T Consensus 289 ~YQ~GVFISR-SS~~-~~-rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~ 365 (402)
T PF02487_consen 289 LYQLGVFISR-SSLP-FF-RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVP 365 (402)
T ss_pred HHHHHHhhhh-ccee-ee-ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC
Confidence 7777766666 2211 11 23332332222222222222222 2234444443 334477777888888888899999
Q ss_pred CccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 359 SNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 359 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
+++|.-++|.......+|..++..++-++
T Consensus 366 ~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 366 PEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999888888877665443
No 164
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.30 E-value=3.2e-11 Score=111.12 Aligned_cols=167 Identities=20% Similarity=0.199 Sum_probs=118.1
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchh--hhH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKAL--LTV 83 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~--~~~ 83 (396)
.++...+..++............|.+..+ +.+.+..+.++..+...++..++.++.|+++||+|||+. ...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQ-------ERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHH-------HhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 34455666677777777777778888655 335566788999999999999999999999999999961 111
Q ss_pred ------HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH
Q 016048 84 ------PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 84 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 157 (396)
+.++..+........++ .+.......+.+. +.+ ..+...+++.|..|+++|++++++.+....+|..++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 363 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNI---PYAALALVALGFF-GLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVG 363 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchh---HHHHHHHHHHHHh-chh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhh
Confidence 11111111111111222 4444444444444 444 778899999999999999999999999999999999
Q ss_pred HHHHHHh----h-hHHHHHHHHHHHHHHHHHH
Q 016048 158 TISARFI----S-TSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 158 ~~~~~~~----~-~~~~f~~~~~~~~~~~~~~ 184 (396)
|.+.+.+ + |+..|.+.++..++..+..
T Consensus 364 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 364 PIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9998876 5 8888888877776665544
No 165
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.29 E-value=6.6e-11 Score=108.83 Aligned_cols=139 Identities=11% Similarity=0.005 Sum_probs=115.6
Q ss_pred HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 251 SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSW 330 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 330 (396)
...........+|.+. +++|.++.+.++..+...++..+++ ++.|++.||+|||+.+..+..+..++.+.....++.+
T Consensus 17 ~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQ-LLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHHHHHhcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 3333344444555554 5579999999999999999999999 7778999999999999999999999888888777665
Q ss_pred HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 331 VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 331 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.... .++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5554 455677788888999999999999999999999999999999999999999888754
No 166
>PRK09952 shikimate transporter; Provisional
Probab=99.29 E-value=7.3e-11 Score=110.32 Aligned_cols=167 Identities=14% Similarity=0.142 Sum_probs=110.8
Q ss_pred HHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHH
Q 016048 14 IFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLA 93 (396)
Q Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~ 93 (396)
.+...+......+..|.+..+. .+.+......+..+..+...++.++.|+++||+|||+.+..+.++..++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~-------~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQN-------LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3333444455556667776543 233333334444455666778888999999999999999888776655543
Q ss_pred HHHh---ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHH-hhhhhhHHHHHHHHHh-----
Q 016048 94 ILAY---SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSG-IVSGAFVCGTISARFI----- 164 (396)
Q Consensus 94 ~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~~----- 164 (396)
.... ..+ ..+.+++..++.++ +.+...+...++++|.+|++.|+...++... +..+|..++|.+.+.+
T Consensus 332 ~~~~~~~~~~--~~~~~~~~~~l~~~-~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 332 PFFMALEAQS--IFWIVFFSIMLANI-AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HHHHHHHcCC--hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3322 222 14444556666677 6677778889999999999999888888544 4457888888888775
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016048 165 -STSAAFQAATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 165 -~~~~~f~~~~~~~~~~~~~~~~~~~e~ 191 (396)
+|+..+...++..++..+.. +.+||+
T Consensus 409 ~~~~~~~~~~~~~~~i~~v~~-~~~~~~ 435 (438)
T PRK09952 409 GSWHSVAIYLLAGCLISAMTA-LLMKDN 435 (438)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHcccc
Confidence 36777777666666655544 456664
No 167
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.28 E-value=1.2e-10 Score=107.15 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|.+....+.........+......+.+-++.+|+|+++.+++.+...+...+.+ +..|++.||+|.|++...+.++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~r-ip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLR-VPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHH
Confidence 444444444333333333333334444444689999999999999999999998 4558999999999999999999888
Q ss_pred HHHHHHHh-----hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 319 HMFLYSVA-----WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 319 ~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
..+..++. ++.+...+ .++.|++ +..++.....+++.+|+++||++.|+....+++|..+++.+.+.+
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 88888875 44444444 4555665 668888999999999999999999999777777777666655543
No 168
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.28 E-value=1.7e-10 Score=106.31 Aligned_cols=133 Identities=11% Similarity=-0.005 Sum_probs=114.2
Q ss_pred hhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-H
Q 016048 257 GLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-A 335 (396)
Q Consensus 257 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~ 335 (396)
.....+|.+. +.+|+++.+.+...+...+...+++ ++.+.+.||+|||+.+..+..+.+++.++....++.+..+. -
T Consensus 38 ~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 38 LPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFAS-LFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred HHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 3344566655 4569999999999999999999999 66689999999999999999999998888887776666555 4
Q ss_pred HHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 336 AVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.+++.+...+...+++.|.+|+++|+++.++......+|..++|.+.+.+.++.
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~ 171 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI 171 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56688888888999999999999999999999999999999999999999998764
No 169
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.28 E-value=1.1e-10 Score=106.67 Aligned_cols=148 Identities=18% Similarity=0.194 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
++..++..+...........+.|.++++.+|+|+.+.++..+...++..++. +..|++.||+|||+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3445555556566666677778877888899999999999999999999999 777899999999999999999999998
Q ss_pred HHHHHhh-hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 321 FLYSVAW-SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 321 ~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++..+.+ +.+...+ .++.+++.+ ..+....++.|.+|+++|+++.++.....++|..+++.+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 8888877 6555544 344465543 4566778899999999999999999988888888888888777653
No 170
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.28 E-value=1.5e-10 Score=107.13 Aligned_cols=148 Identities=13% Similarity=0.029 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
....+..+...+.........|. +++.+|+++.+.++..+...++..++. +..|++.||+|||+.+..+.++.+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 92 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGA-LMFGLWGDRYGRRLPMVTSIVLFSAGTL 92 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 33444444444444445555554 456679999999999999999999999 7778999999999999999999888888
Q ss_pred HHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 322 LYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 322 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+..+.++.+.... .++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 93 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 93 ACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8877776665544 455678888888999999999999999999999999999999999999999887654
No 171
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.26 E-value=4.9e-11 Score=113.08 Aligned_cols=144 Identities=16% Similarity=0.117 Sum_probs=103.6
Q ss_pred HHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc--CchhHHHHHHHHHHHhhhccc-hhhHH
Q 016048 49 LSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR--SRNFFYAYYVLRTLTAMVCEG-SIHCL 125 (396)
Q Consensus 49 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~-~~~~~ 125 (396)
..++......+...++.++.|+++||+|||+.++.+.++.+++.++.+... +.. ......+-++.+. +.+ ...|.
T Consensus 307 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~ 384 (479)
T PRK10077 307 IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP-GIVALLSMLFYVA-AFAMSWGPV 384 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHH-HHhccccch
Confidence 345555667778889999999999999999999999999888877765432 211 1122223333333 222 23467
Q ss_pred HHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH----------HhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 126 SLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR----------FISTSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 126 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~----------~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
...++.|.+|+++|++++++......+|..+++.+.. ..+|++.|++.+++.++..++.+++.||++++
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 7899999999999999999999988888887754433 23677888888887777777776777876543
No 172
>TIGR00895 2A0115 benzoate transport.
Probab=99.26 E-value=1.3e-10 Score=107.22 Aligned_cols=134 Identities=17% Similarity=0.100 Sum_probs=112.0
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA- 334 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 334 (396)
.......|.+ .+.+|.++.+.+...+...++..++. ++.+++.||+|||+.+..+..+..++.++.....+.+...+
T Consensus 34 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (398)
T TIGR00895 34 AAMGFAAPAI-SAEWGLDPVQLGFLFSAGLIGMAFGA-LFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLIL 111 (398)
T ss_pred HHHHhhHHHH-hhccCCCHHHHHHHHHHHHHHHHHHH-HHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 3334444544 45579999999999999999999999 77789999999999999999888888888777766555444
Q ss_pred HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 335 AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
..+.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 455677788888999999999999999999999999999999999999999988754
No 173
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.26 E-value=3.1e-11 Score=111.17 Aligned_cols=160 Identities=14% Similarity=0.057 Sum_probs=115.3
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
+.......+..........+.+|.+..+. .+.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQT-------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 34444555555555666667778886552 34555678888899999999999999999999999998876554
Q ss_pred HhHHHH--HHHHhc--cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHH-HHhhhhhhHHHHHHH
Q 016048 87 LSIIPL--AILAYS--RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIF-SGIVSGAFVCGTISA 161 (396)
Q Consensus 87 ~~~~~~--~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~ 161 (396)
+..+.. ....+. ++ .+.+....++.|+ +.+...+...+++.|.+|+++|++++++. +....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLAL-IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHH-HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 444333 222222 33 6667777888888 77788888999999999999999999874 555667888888888
Q ss_pred HHh----h-hHHHHHHHHHHH
Q 016048 162 RFI----S-TSAAFQAATAGS 177 (396)
Q Consensus 162 ~~~----~-~~~~f~~~~~~~ 177 (396)
+.+ + |+..++...+..
T Consensus 370 g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHcCcchhHHHHHHHHH
Confidence 875 4 666655554433
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=1.6e-10 Score=106.15 Aligned_cols=151 Identities=11% Similarity=0.067 Sum_probs=125.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
+.++......+............+|.+. +++|.+..+.++..+...++..+++ +..|++.||+|||+.+..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGA-PIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHH-HHHHHHHccCccHHHHHHHHHHHHH
Confidence 4455566666666666666667777765 4569999999999999999999999 7778999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 319 HMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.++....++.+...+ -++.|++.+...+.....+.|..|+++|+++.+.......++..++|.+.+.+.+..
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 9998888887766655 455677777777888888999999999999999999999999999999999887753
No 175
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.24 E-value=1.1e-10 Score=109.74 Aligned_cols=170 Identities=12% Similarity=0.010 Sum_probs=108.5
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc--CCchhhh-H
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY--GRKALLT-V 83 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grk~~~~-~ 83 (396)
++...+..++...........+|.++.+. .+.+..+.++....+.++..++.++.|+++||+ |||+... .
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-------~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~ 327 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEV-------KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVF 327 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHH
Confidence 44445555555555555667888887652 345556778888889999999999999999999 5554322 2
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhH-HHHHHHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFV-CGTISAR 162 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~ 162 (396)
...+..++.++..+.+..+ .+...+..++.|. ...........+..|.+|+++|++++|+.+....+|.. .+|.+.+
T Consensus 328 ~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 328 FMTLVTIATIVYWLNPAGN-PTVDMACMIVIGF-LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHHHhcccC-hHHHHHHHHHHHH-HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 2233333333322222111 4444445555555 32222233445678999999999999999887777654 4777776
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHH
Q 016048 163 FI----STSAAFQAATAGSIISAVYMR 185 (396)
Q Consensus 163 ~~----~~~~~f~~~~~~~~~~~~~~~ 185 (396)
.+ +|+..|++.++.+++..+...
T Consensus 406 ~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 406 YTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 55 788999888877776655543
No 176
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5.4e-10 Score=99.50 Aligned_cols=174 Identities=13% Similarity=0.100 Sum_probs=137.3
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+++.++..+..+++...+.....+++.++++|. .+.+....+++.-.+.++..+|+.+.|+++|| +.|+.+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-------~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~ 280 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESV-------AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALI 280 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc-------cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHH
Confidence 345677788889999999999998888887763 35666789999999999999999999999999 9999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
....+.++..+...+..+. .+..++.-++.|+ +...........+++ ..+|+++.+.++.....++|..+|..+++
T Consensus 281 ~~~~l~a~~~l~l~~~~~~--~~~~~~~~~~wg~-a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 281 AALLLLALALLALTFTGAS--PALALALLFLWGF-AFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred HHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHH-HhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888887777776665552 5666666777787 655555555566666 33689999999999999999999999988
Q ss_pred Hh----hhHHHHHHHHHHHHHHHHHHHHhc
Q 016048 163 FI----STSAAFQAATAGSIISAVYMRIFL 188 (396)
Q Consensus 163 ~~----~~~~~f~~~~~~~~~~~~~~~~~~ 188 (396)
.. ++....++.+++.++..++.....
T Consensus 357 ~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 357 LVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 677788888888777766654433
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.24 E-value=1.5e-10 Score=106.40 Aligned_cols=162 Identities=10% Similarity=0.140 Sum_probs=124.1
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
.++...+..++...........+|.+.+| .+.+..+.|...+...++..+..++.|++.||+|+|+.+..+.
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~ 277 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQA--------AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSA 277 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHHH--------CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 34444555555555555556666777543 3555667889989999999999999999999999999999999
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHH-HhhhhhhHHHHHHHHHh
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFS-GIVSGAFVCGTISARFI 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~~ 164 (396)
+..+++.++.+..++ .+.+++..++.|+ +.+...+....++.+. +++++++..+..+ ...++|..+||.+++.+
T Consensus 278 ~~~~~~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 278 ICGVVRWGLMGSTTA---LPWLIVIQILHCG-TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred HHHHHHHHHHHhhhh---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888888888 8888999999999 8888888889998887 5667788888876 55677888899998887
Q ss_pred hhH---HHHHHHHHHHHHH
Q 016048 165 STS---AAFQAATAGSIIS 180 (396)
Q Consensus 165 ~~~---~~f~~~~~~~~~~ 180 (396)
-.+ ..|+..+++.++.
T Consensus 353 ~~~~g~~~~~~~~~~~~~~ 371 (382)
T PRK11128 353 YQHLGAGVFWVMALVALPA 371 (382)
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 322 3555555555443
No 178
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.23 E-value=2.6e-10 Score=105.52 Aligned_cols=152 Identities=18% Similarity=0.130 Sum_probs=118.7
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC 317 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 317 (396)
+|.+....++.++..........+++.+.++ +|+++.+.+...+...+...+++ ++.|++.||+|||+.+..+..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISA-WISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4566667777777777777677788888855 69999999999999999999999 777899999999999999988888
Q ss_pred HHHHHHHH---h-hhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHH-Hhhhhhhhhhhhcc
Q 016048 318 VHMFLYSV---A-WSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFAN-LVSPLAFSPLTGDC 391 (396)
Q Consensus 318 i~~~~~~~---~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~ 391 (396)
++.++... . .+.+.... ..+.+++.+...+...+.+.+.+|+++|++++|+.+....+|. .++|.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 87654422 1 22333222 3344666666667777888899999999999999999999986 58899888887654
No 179
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.22 E-value=2e-10 Score=109.03 Aligned_cols=146 Identities=13% Similarity=0.015 Sum_probs=120.5
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
..+..+.............|.+.+ .+|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAG-DLGSSLSQVQWVITSYMLANAISI-PLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhhhhHHHHHHHHHHHHHH-HhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 334444444444555555666654 469999999999999999999999 777899999999999999999999998888
Q ss_pred HHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 324 SVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
...++.+.... .++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.|.+.++.
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 153 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY 153 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc
Confidence 87776665554 455578888888999999999999999999999999999999999999999998754
No 180
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.22 E-value=4.8e-10 Score=105.84 Aligned_cols=122 Identities=14% Similarity=0.107 Sum_probs=96.6
Q ss_pred HhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhh
Q 016048 265 YLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSV 343 (396)
Q Consensus 265 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 343 (396)
.+.+.+|++..+.+...+...++..+++ ++.|++.||+|||+++..+.+..+++.++.++..+.+...+ .++.|++.+
T Consensus 61 ~l~~~~gls~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~ 139 (476)
T PLN00028 61 IIRDNLNLTKSDIGNAGIASVSGSIFSR-LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLA 139 (476)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 4456679999999998888888888888 77789999999999999988888888887777766555444 344565555
Q ss_pred hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 344 FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
.. .....++.|.+|+++||++.|+.+...++|..+++.+.+.+.
T Consensus 140 ~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~ 183 (476)
T PLN00028 140 TF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVF 183 (476)
T ss_pred hh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 334567889999999999999999888888888877776554
No 181
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=2.3e-09 Score=101.54 Aligned_cols=170 Identities=12% Similarity=0.104 Sum_probs=116.9
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHH-HHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQA-IIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
+....++............+.+..+ +.+.+..+.|+... ...++.+++.++.|+++||+|||+.+.++.++.
T Consensus 227 ~ll~~~l~~~~~~~~~~~~~~~l~~-------~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 227 ILLLIVLYKLGDAFAMSLTTTFLIR-------GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3333344444433333444555433 34677788899874 556899999999999999999999887766655
Q ss_pred HHHHHHH---Hhc-cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 89 IIPLAIL---AYS-RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 89 ~~~~~~~---~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
+++.+.. +.. ++ .+.+.+.-++..+ +.+...+...++..+..+++.+++..++.+...++|..+++.+++.+
T Consensus 300 ~l~~l~~~~l~~~~~~---~~~l~~~~~l~~~-~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l 375 (491)
T PRK11010 300 GVSNAGYWLLSITDKN---LYSMGAAVFFENL-CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWF 375 (491)
T ss_pred HHHHHHHHHHHhcccc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544322 333 23 4445555566555 44555566788899999999999999999999999988777777654
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 191 (396)
||+..|.+..+++++..+.. ..++++
T Consensus 376 ~~~~G~~~~f~~~~~~~l~~l~~~-~~~~~~ 405 (491)
T PRK11010 376 VEAHGWPTFYLFSVAAAVPGLLLL-LVCRQT 405 (491)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHH-HHHHhc
Confidence 78888988888887766555 344544
No 182
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.22 E-value=2.4e-10 Score=105.52 Aligned_cols=168 Identities=11% Similarity=0.076 Sum_probs=124.9
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
.....+.............|.+..+... +.+.+..+.|+..++..+...++.+..|++.||+|||+.+.++.++.+
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~y~~~~~~----~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 220 FVLYVVGVACVYDVFDQQFANFFTSFFA----TPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc----ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 3333333333333333345666665431 123444567888999999999999999999999999999999999888
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHH-HHHhhhhhhHHHHHHHHHh----
Q 016048 90 IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGI-FSGIVSGAFVCGTISARFI---- 164 (396)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~~---- 164 (396)
+...+...+++ .+.+++.+++.|+ +..........+..+..|++.++...+. .+....+|..+++.+++.+
T Consensus 296 l~~~~~~~~~~---~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 296 VRIIGSSFATT---ALEVVILKMLHAF-EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHHHHHHhcCC---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 88888788888 7888889999998 7666555666778888888888776665 5678889999998888775
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 016048 165 STSAAFQAATAGSIISAVYMR 185 (396)
Q Consensus 165 ~~~~~f~~~~~~~~~~~~~~~ 185 (396)
|++..|.+.+++.++..++..
T Consensus 372 G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 372 GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 778999998888777666543
No 183
>PRK11043 putative transporter; Provisional
Probab=99.21 E-value=5e-10 Score=103.62 Aligned_cols=140 Identities=11% Similarity=0.048 Sum_probs=112.7
Q ss_pred HHHhhhhhhhhHHHH--hhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh
Q 016048 251 SNLADAGLQGSMMYY--LKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS 328 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 328 (396)
....+.....+.|.+ +++++|.++.+.+...+...++..+++ +..|++.||+|||+.+..+..+..++.++....++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 93 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQ-LLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVES 93 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 333444455555654 556779999999999999999999999 77789999999999999998888888887777766
Q ss_pred hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 329 SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.... .++.+++.+...+...+.+.|.+|++++++..+..+....++..++|.+.+.+.++.
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 555444 344566666666777888999999999999999999889999999999999988764
No 184
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=4.2e-10 Score=105.01 Aligned_cols=145 Identities=14% Similarity=0.078 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
..+..+.............| .+++++|.++.+.+...+...++..+++ ++.|++.||+|||+++..+....+++.+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~l~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 100 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAFIGRPFGG-ALFGLLADKFGRKPLMMWSIVAYSVGTGLS 100 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333 4556679999999999999999999999 777899999999999999999999998888
Q ss_pred HHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 324 SVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
...++.+.... -++.|++.+..++....++.|.+|+++|+++.++......+|..++|.+.+.+.+.
T Consensus 101 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 101 GLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 88777665555 45668888888999999999999999999999999999999999999888877664
No 185
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=1.6e-10 Score=101.92 Aligned_cols=177 Identities=15% Similarity=0.206 Sum_probs=141.8
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
+++++....+..++..=+.+.+...-..+. .++++++..+..++.....+..+++++++|++.||+|.|+++.
T Consensus 250 ~~~~i~~FLiA~~~~~DGv~til~~~~~fg-------~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 250 GRKNLVLFLIARFFYIDGVNTILAMGGVFG-------AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHH-------HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh
Confidence 344666666666666666666655555563 4478888999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
.+.++..+.++..-+... ...+.++-.+.|. ..|..+....++.++..|+++-++.+|+++...-.+..+||.+-+
T Consensus 323 ~~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~-s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~ 398 (438)
T COG2270 323 IGLVILSIAALYLIFLEG---ELDFWILGLLVGT-SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVA 398 (438)
T ss_pred HHHHHHHHHHHHHHHccc---cHHHHHHHHHHHH-hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHH
Confidence 999999888887777766 5566677888998 899999999999999999999999999999999999999999888
Q ss_pred Hh-----hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016048 163 FI-----STSAAFQAATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 163 ~~-----~~~~~f~~~~~~~~~~~~~~~~~~~e~ 191 (396)
.+ +-|..+....++..+..+ ....+|++
T Consensus 399 v~t~iTg~~r~g~~~i~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 399 VITQITGSSRAGVLSIIVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred HHHHHhcchhhHHHHHHHHHHhhHh-hEEeecCC
Confidence 76 347666666665555444 33556655
No 186
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.20 E-value=4.6e-10 Score=106.62 Aligned_cols=149 Identities=14% Similarity=0.060 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
+...++..++...-....+..+|.+..+ +|.+..+.++..+.+.++..... +..|+++||+|||+.+..+..+..++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~-~~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMV-LPMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3344445555555555666667777654 69999999999999999988888 677899999999999999999999999
Q ss_pred HHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhcc-CCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 321 FLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQV-ASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 321 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
++.+..++.+..++ -.+.|++.+...|.....+.+.+ |+++|++++|+......+|..++|.+.|.+.++.
T Consensus 86 ~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 86 LAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99888877776665 45668888888888777776665 6789999999999999999999999999998864
No 187
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.20 E-value=4.5e-10 Score=104.10 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=104.6
Q ss_pred chhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc--CchhHHHHHHHHHHHhhhccc
Q 016048 43 CSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR--SRNFFYAYYVLRTLTAMVCEG 120 (396)
Q Consensus 43 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~ 120 (396)
.+.+..+.|+......++..++.++.|+++||+|+|+.+..+.++..++..+..+.+ .....+.+++..++.|+ +.+
T Consensus 246 ~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-g~~ 324 (406)
T PRK15402 246 EQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF-GIG 324 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH-HHH
Confidence 355667788887778888999999999999999999999998888777777666532 11125667788888998 777
Q ss_pred hhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHhcCC
Q 016048 121 SIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 121 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~~~~~~e 190 (396)
...+......... ++++|+++.+..+....+|..+|+.+++.+ ++....+...+..++...+...+.++
T Consensus 325 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 325 LANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred HHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7666666655444 458999999999999999999999999876 33333333333343333333344443
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.19 E-value=5.4e-10 Score=103.08 Aligned_cols=150 Identities=11% Similarity=0.009 Sum_probs=119.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
|.+.......+............+|.+.++ +|.++.+.++..+...++..++. +..|++.||+|||+.+..+.....+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAM-LFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHhHHHHHhCChHHHHHHHHHHHH
Confidence 334444444444555545555667776655 69999999999999999999998 7778999999999999999988888
Q ss_pred HHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 319 HMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+.......++.+.... .++.+.+.+...+...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8888877666554443 44557777777888999999999999999999999999999999999998887654
No 189
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.19 E-value=4.2e-08 Score=90.57 Aligned_cols=290 Identities=12% Similarity=0.144 Sum_probs=175.8
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhh-hhcccccccccCCchhhh
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVM-MPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grk~~~~ 82 (396)
.+.+....+..|+..+++++..|.=..+..+. .+.+.....++-+...+...+. .++.+++++|++|++++-
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~-------~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~ 78 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLVVTA-------KGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFY 78 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhheeecc-------cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHH
Confidence 34556667777777777777776633332211 1122245677777776766666 889999999999999999
Q ss_pred HHHHHhHHHHHHHHhc--cCch--------------------------hHHHHHHHHHHHhhhccchhhH-HHHHHHhcC
Q 016048 83 VPITLSIIPLAILAYS--RSRN--------------------------FFYAYYVLRTLTAMVCEGSIHC-LSLAYVADN 133 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~--~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~-~~~~~i~~~ 133 (396)
.....+.....+.++. ++.. ..|...+..+...+ -+....+ .-..+.+|.
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el-w~~~vvS~lFW~fandi 157 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL-WGSVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 8887777777776654 1100 02333344445555 2233333 678899999
Q ss_pred CCcccchhHHHHHHHhhhhhhHHHHHHHHHhh------------hH----HHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Q 016048 134 VPPGRRASVFGIFSGIVSGAFVCGTISARFIS------------TS----AAFQAATAGSIISAVYMRIFLPESVRDEDL 197 (396)
Q Consensus 134 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~------------~~----~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~ 197 (396)
++.+|-.|..+++..+.++|.++++.+..++. |. ..+.+..+...+...+. ..+.+....+++
T Consensus 158 ~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~-~~l~~~~~~~~~ 236 (472)
T TIGR00769 158 TTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLY-WWVNRNVLTDPR 236 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCcc
Confidence 99999999999999999999999998877653 21 22233333333333333 333222111110
Q ss_pred ccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc-
Q 016048 198 YTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQ- 276 (396)
Q Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 276 (396)
. .+. ++++++++++.+..+.++.+.++|.+..+.+...+........+...-...++.+ -|+.+
T Consensus 237 -~----------~~~---~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~ 301 (472)
T TIGR00769 237 -S----------YNP---ALKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEY 301 (472)
T ss_pred -c----------cch---hhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHH
Confidence 0 000 0111223335567788887778998888887777777666555544444454443 23222
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Q 016048 277 ---FADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 277 ---~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
.|......++..++.+ ++.+++.+|+|-+....+.-++..+
T Consensus 302 ~~f~g~~~~~~gi~tl~~~-l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 302 SAFMGDFSTWTGVVSVTMM-LLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3455556677777777 4448999999887665554444333
No 190
>TIGR00898 2A0119 cation transport protein.
Probab=99.18 E-value=3e-10 Score=108.42 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=105.8
Q ss_pred HHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC
Q 016048 56 IIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP 135 (396)
Q Consensus 56 ~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 135 (396)
...+..+++.++.+++.||+|||+.+..+.++.+++.++..+.++.. .+...+.-++.++ +.+...+....+..|.+|
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKF-GITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHH-HHHHHHHHHHHHhccccc
Confidence 34566677888899999999999999999999999888888776521 2444455556665 666677888999999999
Q ss_pred cccchhHHHHHHHhhhhhhHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 136 PGRRASVFGIFSGIVSGAFVCGTISARFI--STSAAFQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 136 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
++.|+.++++.+....+|.+++|.+.+.. ++..++.+.++..++..+.. +++||+..+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~~ 500 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILT-LFLPETKGV 500 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCcCCCCC
Confidence 99999999999999999999999988832 34567777777666665554 678887543
No 191
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.17 E-value=7.1e-10 Score=102.35 Aligned_cols=134 Identities=15% Similarity=0.073 Sum_probs=108.6
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA- 334 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 334 (396)
......+|.+. +.+|.|+.+.+...+...+...++. +..|+++||+|||+.+..+.....++.+.....++.+....
T Consensus 25 ~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (394)
T PRK11652 25 TIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQ-LFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAA 102 (394)
T ss_pred HHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 33334455555 5569999999999999999999999 77789999999999999999888888887777666554444
Q ss_pred HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 335 AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.++.+++.+...+....+..|.+++++++++.+..+....++..++|.+.+.+.+..
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 103 SAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred HHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444566666667777888889999999999999999999999999999999887753
No 192
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=4.7e-10 Score=105.04 Aligned_cols=149 Identities=17% Similarity=0.147 Sum_probs=111.3
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.++.++...++...+........+.+..+.. + +..+.++..++..++.+++.+++++++||+|||+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVL-------G-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeec-------C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 34444555555555555554444444433321 1 223566777788999999999999999999999999999
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-------cccchhHHHHHHHhhhhhhHHH
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-------PGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g 157 (396)
..+.+++.+...+.++ ..+.+++..++.|+ +.+...+...++++|..| ++++|..+++.+....+|..++
T Consensus 294 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGS--NLPLILVLIILAGF-GQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcch--hHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 9888888877766542 15667778888888 888888889999999875 4567999999999999999999
Q ss_pred HHHHHHh
Q 016048 158 TISARFI 164 (396)
Q Consensus 158 ~~~~~~~ 164 (396)
+.+.+.+
T Consensus 371 ~~i~g~l 377 (437)
T TIGR00792 371 GFLVGLI 377 (437)
T ss_pred HHHHHHH
Confidence 8888765
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=3.4e-10 Score=118.86 Aligned_cols=162 Identities=14% Similarity=0.074 Sum_probs=125.8
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHH-HHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIY-LSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~-~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
++...+..++...........+|.+..+. ++.+.. +.|++.+...++.++++++.|+++||+++|+.+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~ 306 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEV-------LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA 306 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHH-------hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH
Confidence 33344444444444455556677776553 345555 7899999999999999999999999999999999988
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI- 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~- 164 (396)
++.+++.++..+..+ .+.+++..++.|+ +.+...+...+++.+..|+++|+++++..+....+|.++++.+++.+
T Consensus 307 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 307 LGLALSLFLLPTAPS---LASVLVLFFLFGF-SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHhhh---HHHHHHHHHHHHH-HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777 7888888999998 88888888899999999999999999999999999988887777654
Q ss_pred ----hhHHHHHHHHHHHHH
Q 016048 165 ----STSAAFQAATAGSII 179 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~ 179 (396)
++...|++.+.+.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 383 GLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhccCHHHHHHHHHHHHHH
Confidence 234455554444433
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.16 E-value=2e-09 Score=97.79 Aligned_cols=132 Identities=11% Similarity=0.073 Sum_probs=115.8
Q ss_pred hhhhhhHHHHhhhhccccccc-hhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQ-FADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA 334 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 334 (396)
-....+...++.+.+|++..+ .|.+......+..+.. +.+|++.||+|.|+++..+.+..++..+++++..+...+.+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666777788999999 9999999999999999 77789999999999999999999999999998877655554
Q ss_pred -HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 335 -AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 335 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
-+++|++.+... ....++.+.+|+++|+++.|+.+....+|.++++++.+.+..
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s 175 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT 175 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567789998888 999999999999999999999999999999999999998543
No 195
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.16 E-value=5.9e-10 Score=102.75 Aligned_cols=165 Identities=7% Similarity=-0.041 Sum_probs=116.3
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhH-HHHhhhhcccccccccCCchhhhHH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGL-GTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
.++......++...+........+.+..| .+.+..+.|++...... ...++.++.|++.||+|+|+.+..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD--------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG 280 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh--------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34445555566666565666666777443 46777888998887764 6667789999999999999999887
Q ss_pred HHHhHHHHHHHHh------ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-ccchhHHHHHHHhhhhhhHHH
Q 016048 85 ITLSIIPLAILAY------SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-GRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 85 ~~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g 157 (396)
..+.++..+.... .++ .+.+.....+.++ +.+...+...+.+.+..++ +++++.++..+...++|..+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g 356 (390)
T TIGR02718 281 VGLAGSLALLWFAQAAFWLAPG---IAVAWSCSAFGSL-ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA 356 (390)
T ss_pred HHHHHHHHHHHHHHHHcccCCc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 7665333332221 122 3444455556666 5666667777787777776 889999999999999999999
Q ss_pred HHHHHHh----hhHHHHHHHHHHHHHHHH
Q 016048 158 TISARFI----STSAAFQAATAGSIISAV 182 (396)
Q Consensus 158 ~~~~~~~----~~~~~f~~~~~~~~~~~~ 182 (396)
|.+++.+ +++..|...+++.++..+
T Consensus 357 ~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 357 SSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999875 667788777766655443
No 196
>PRK10133 L-fucose transporter; Provisional
Probab=99.15 E-value=1.4e-09 Score=101.49 Aligned_cols=145 Identities=10% Similarity=-0.022 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
..+.+..+...+.........|.+ ++.+|.|+.+.+...+...++..+++ +..|++.||+|||+++..+..+..++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~-~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIP-IPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 444455555566666666667776 77789999999999999999999999 6778999999999999999999999987
Q ss_pred HHH---HhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 322 LYS---VAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 322 ~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
+.. ..++.+.... .++.|++.+...+..+.++.|..|+++|+...++.+....+|..++|.+++.+.
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 753 3344444433 566688889999999999988877666667899999999999999999887654
No 197
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.15 E-value=4.8e-10 Score=104.93 Aligned_cols=175 Identities=11% Similarity=0.000 Sum_probs=110.4
Q ss_pred HHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHh
Q 016048 9 HLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLS 88 (396)
Q Consensus 9 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~ 88 (396)
.+.+..++...........+|.+..+ +.+.+..+.++..+.+.++..++.++.|+++||+++|+....+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~p~~l~~-------~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~ 327 (438)
T TIGR00712 255 YIAIANVFVYLLRYGVLDWSPTYLKE-------VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFM 327 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHH-------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHH
Confidence 33344444444444555677888665 23556667888889999999999999999999997544323333222
Q ss_pred H---HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhh-hHHHHHHHHHh
Q 016048 89 I---IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGA-FVCGTISARFI 164 (396)
Q Consensus 89 ~---~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~~ 164 (396)
. ++.+.....+..+ .+...+..+..|. +.............|.+|+++|+++.|+.+....+| ..+||.+.+.+
T Consensus 328 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 328 TLVTIAVIVYWMNPAGN-PLVDMICMIVIGF-LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred HHHHHHHHHHHhcCCCc-hHHHHHHHHHHHH-HHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 1 2222222222111 3333344445554 322222222356789999999999999998776665 56788777765
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016048 165 ----STSAAFQAATAGSIISAVYMRIFLPESV 192 (396)
Q Consensus 165 ----~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 192 (396)
+|...|++..+..++..+...+..||.+
T Consensus 406 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 406 VDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6788888888877777777777777753
No 198
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.14 E-value=2.7e-10 Score=100.48 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=119.4
Q ss_pred HHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016048 248 AFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW 327 (396)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 327 (396)
+....+.--.++.-.| ++.+..++|..+.|.+.+...+.--++. ++.|.++||.+.|+.+..++++.++..+++++.+
T Consensus 38 Ya~fYl~RknF~~a~p-~l~e~~~lsk~~lG~i~s~f~i~YG~sK-f~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~ 115 (448)
T COG2271 38 YAAFYLTRKNFNLAMP-ALIEDGGLSKTQLGILGSAFSITYGVSK-FVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP 115 (448)
T ss_pred HHHHHHHHHhHhhccH-HHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh
Confidence 3333333333333334 4455558999999999999999999999 8889999999999999999999999999999998
Q ss_pred hhhHHHHH-HHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhh--hhhhhcc
Q 016048 328 SSWVPYAA-AVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAF--SPLTGDC 391 (396)
Q Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~~ 391 (396)
+.+...+. .+-+.+.+...|.....+.+-+|+++||+..++.|...++|+.+.|.+. +.+.+++
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 77766664 4458899999999999999999999999999999999999999999999 7777653
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.14 E-value=1.6e-09 Score=100.19 Aligned_cols=147 Identities=10% Similarity=0.014 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH
Q 016048 242 SQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF 321 (396)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~ 321 (396)
...+...+...+........+|.+ ++.+|.++.+.+.+.+...++..++. +..+++.||+|||+.+..+..+.+++.+
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~-~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMA-IPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 334444445555444444555555 67789999999999999999999999 6678999999999999999999999887
Q ss_pred HHHHhh---hhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 322 LYSVAW---SSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 322 ~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++.... +.+.... .++.+.+.+...+....++.+..|+++|++..++.+....+|..++|.+.+.+...
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 765432 3333333 55668888999999999999999999999999999999999999999999988644
No 200
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=8.6e-11 Score=106.15 Aligned_cols=155 Identities=14% Similarity=0.148 Sum_probs=124.6
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFG 316 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 316 (396)
.+++....++...........+.+++--+++|. +-.+...|......-.+.++.- +...++.+|+|+.+++..++.+.
T Consensus 369 ~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~-ffs~klI~kiGHv~v~~lgLa~~ 446 (618)
T KOG3762|consen 369 ASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFY-FFSFKLIEKIGHVNVMYLGLACN 446 (618)
T ss_pred cCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHH-HHHHHHHHHhcccceeeehhhHH
Confidence 345555555555556665566666666666665 6666666777777777777777 67789999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHH-HHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHH-HHHHhhhhhhhhhhhcccC
Q 016048 317 CVHMFLYSVAWSSWVPYAA-AVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICS-FANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 317 ~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~ 393 (396)
.+-++.+....++|..+.+ ++-++..+..+....++++...||+.+.+++++...... +|..+|.+++|.+.+.++.
T Consensus 447 ~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 447 VGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred HHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh
Confidence 9999999999999887775 445888999999999999999999999999999987764 9999999999999887654
No 201
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.12 E-value=9.2e-10 Score=100.97 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=113.0
Q ss_pred hhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HH
Q 016048 258 LQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AA 336 (396)
Q Consensus 258 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 336 (396)
....+|.+.++ +|+++.+.+...+...++..++. +..|++.||+|||+.+..+..+..++.......++.+.... .+
T Consensus 10 ~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 10 YLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQ-LFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred HhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34566777665 69999999999999999999999 77789999999999999999999999888887766555444 45
Q ss_pred HHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 337 VFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5577777788889999999999999999999999999999999999999988754
No 202
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.11 E-value=1.7e-09 Score=98.83 Aligned_cols=177 Identities=16% Similarity=0.198 Sum_probs=137.9
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
++++...++..++...+.+......+.|.+|.. +.+....|.+.++..++.++.-...+++..|+|.|+++.+
T Consensus 206 ~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~g-------g~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~ 278 (400)
T PF03825_consen 206 NPRFLVFLLAAFLIGISHAAYYTFFSIYLQELG-------GYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLL 278 (400)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 344556667778888888888888888866631 1344566777788888899999999999999999999999
Q ss_pred HHHHhHHHHHHHHhc-cCchhHHHH----HHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHH-hhhhhhHHH
Q 016048 84 PITLSIIPLAILAYS-RSRNFFYAY----YVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSG-IVSGAFVCG 157 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~l----~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g 157 (396)
+.+..++=..+.+.. ++ .+.. +....++|+ ..+..+.....++.+..|++.|+++.+++.. ..++|..+|
T Consensus 279 a~~~~~vR~~l~a~~~~~---~~~~~~~~~l~q~lhG~-tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG 354 (400)
T PF03825_consen 279 ALVAYAVRWLLYAYFSDP---WPFIVALQLLGQLLHGL-TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIG 354 (400)
T ss_pred HHHHHHHHHHHHHHhcCC---cHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHH
Confidence 999999998888887 44 2332 334567999 8899999999999999999999999999876 568999999
Q ss_pred HHHHHHh----------hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016048 158 TISARFI----------STSAAFQAATAGSIISAVYMRIFLPES 191 (396)
Q Consensus 158 ~~~~~~~----------~~~~~f~~~~~~~~~~~~~~~~~~~e~ 191 (396)
..++|++ .|...+.+.+++.++..++.+++.||+
T Consensus 355 ~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 355 SLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999886 233455666666666666665666654
No 203
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.11 E-value=1.3e-09 Score=101.92 Aligned_cols=163 Identities=15% Similarity=0.121 Sum_probs=97.7
Q ss_pred HhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH-
Q 016048 18 CFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA- 96 (396)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~- 96 (396)
..........+|.++.+. .+.+..+.+...++..+...+++++.|+++||+|||+.+....++.++......
T Consensus 256 ~~~~~~~~~~lp~~l~~~-------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 328 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNT-------AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILS 328 (432)
T ss_pred HHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 334444556678776552 345556778888888888889999999999999999988776655433332111
Q ss_pred -hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhh-hhHHHHHHHHHh---h-hHHHH
Q 016048 97 -YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSG-AFVCGTISARFI---S-TSAAF 170 (396)
Q Consensus 97 -~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~~---~-~~~~f 170 (396)
...... ....+..-.+.+. ..+...+....+++|++|+|.|+.++|+.+...++ .....|.+.+.+ + |...+
T Consensus 329 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~ 406 (432)
T PRK10406 329 ALQNVSS-PYAAFGLVMCALL-IVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFF 406 (432)
T ss_pred HHHcCCc-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHH
Confidence 111101 2222222222222 23334455678899999999999999998765443 233466666654 3 44455
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 016048 171 QAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~e 190 (396)
+..++..++..+.. +++++
T Consensus 407 ~~~~~~~~i~~~~~-~~l~~ 425 (432)
T PRK10406 407 WYVTLMAVVAFLVS-LMLHR 425 (432)
T ss_pred HHHHHHHHHHHHHH-HHhhh
Confidence 55555555544444 34443
No 204
>PRK09848 glucuronide transporter; Provisional
Probab=99.09 E-value=8.9e-10 Score=103.47 Aligned_cols=152 Identities=16% Similarity=0.116 Sum_probs=111.8
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
++.+....+..++...+........|.+..+. ++.+....++......++.+++.+++++++||+|+|+.+..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYV-------LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeee-------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34455555556666665555555556664442 33444454555555567788899999999999999999999
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcc-------cchhHHHHHHHhhhhhhHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPG-------RRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~ 156 (396)
+.++..++.++..+.+.. +++.+++..++.|+ +.+...+...++.+|..|++ ++|...+..+....+|..+
T Consensus 300 g~~~~~i~~~~~~~~~~~-~~~~~~~~~~l~g~-G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 300 GALLGTCGYLLFFWVSVW-SLPVALVALAIASI-GQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHcCch-hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 999888888777765421 26667777888998 88888899999999988754 3588889999999999999
Q ss_pred HHHHHHHh
Q 016048 157 GTISARFI 164 (396)
Q Consensus 157 g~~~~~~~ 164 (396)
|+.+.+.+
T Consensus 378 g~~i~g~~ 385 (448)
T PRK09848 378 GGSIPAFI 385 (448)
T ss_pred HHHHHHHH
Confidence 88877653
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=1.1e-09 Score=114.63 Aligned_cols=164 Identities=15% Similarity=0.062 Sum_probs=125.2
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.++...+..++..+..+.....+|.|..+. ++.+..+.|++.+.+.++.++++++.|+++||.++++.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKET-------LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHH
Confidence 4455555555555555556666778887663 456667899999999999999999999999998888777766
Q ss_pred HHHhHHHHHHHHhc--------------------cCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHH
Q 016048 85 ITLSIIPLAILAYS--------------------RSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFG 144 (396)
Q Consensus 85 ~~~~~~~~~~~~~~--------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 144 (396)
.++.+++.+...+. ++ .+.+++..++.|+ +.+...+...+++.+.+|+++||+++|
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~G~v~g 373 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRILIDLFGLAA-AGGLYIVPLFAALQAWANPAHRARVIA 373 (1140)
T ss_pred HHHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHHHHHHHHHHH-HHHHhHHHHHHHHHhhCCcccceeeeH
Confidence 66666655544443 44 6778888899999 888888889999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHh-----hhHHHHHHHHHHHHH
Q 016048 145 IFSGIVSGAFVCGTISARFI-----STSAAFQAATAGSII 179 (396)
Q Consensus 145 ~~~~~~~~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~ 179 (396)
..+....+|..+++++.+.+ +....+++.+++.++
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999999999888766 334455544444333
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=99.08 E-value=1.6e-09 Score=101.36 Aligned_cols=139 Identities=15% Similarity=0.178 Sum_probs=92.1
Q ss_pred HHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHH-HH
Q 016048 17 HCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLA-IL 95 (396)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~-~~ 95 (396)
............|.+.++. .+.+..+.++....+.++..++.++.|+++||+|||+.+..+.++..+... ..
T Consensus 250 ~~~~~~~~~~~~p~~l~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTV-------LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3344445556678776552 345556778888888999999999999999999999998876554433221 11
Q ss_pred H-hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHH-hhhhhhHHHHHHHHHh
Q 016048 96 A-YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSG-IVSGAFVCGTISARFI 164 (396)
Q Consensus 96 ~-~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~~ 164 (396)
. ...+. .+....+...+.|+ +.+...+....++.|..|+++|+..+++... +..++..++|.+.+.+
T Consensus 323 ~~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 323 SWLVAAP-SFARMLAVELWLSF-LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHcCC-chHHHHHHHHHHHH-HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 1 11111 14444444555566 5556666677889999999999999998644 3334456677777654
No 207
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.07 E-value=6e-10 Score=102.06 Aligned_cols=137 Identities=19% Similarity=0.216 Sum_probs=112.3
Q ss_pred HHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 251 SNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSW 330 (396)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 330 (396)
............| ++.+.+|+++.+.+.+.+...++..++. +..|+++||+|||+.+..+..+..++.++....++.+
T Consensus 7 ~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (379)
T TIGR00881 7 YYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISK-FVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLW 84 (379)
T ss_pred HHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhh-hhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHH
Confidence 3333344444455 4556679999999999999999999999 7778999999999999999999999988888877766
Q ss_pred HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhh-hhhhhhh
Q 016048 331 VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPL-AFSPLTG 389 (396)
Q Consensus 331 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~-~~g~l~~ 389 (396)
...+ .++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 5555 455577788888999999999999999999999999999999999994 5554444
No 208
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.06 E-value=5.1e-09 Score=94.33 Aligned_cols=166 Identities=10% Similarity=0.049 Sum_probs=133.0
Q ss_pred ccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccC
Q 016048 21 TSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRS 100 (396)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
++....-.|.|..+. -++.+.+....|++.++..+..++...+..++.+|+|.|+.++++.++..+=.+.++++++
T Consensus 236 Y~vfdqqf~~y~~~~----f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~ 311 (412)
T PF01306_consen 236 YDVFDQQFPIYFASF----FQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN 311 (412)
T ss_dssp HHHHHHHHHHHHHHT----SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S
T ss_pred HHHHHHHHHHHHHHH----hcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc
Confidence 334333356665554 2344566778999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHH-HHhhhhhhHHHHHHHHHh----hhHHHHHHHHH
Q 016048 101 RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIF-SGIVSGAFVCGTISARFI----STSAAFQAATA 175 (396)
Q Consensus 101 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~~----~~~~~f~~~~~ 175 (396)
.+.+.+.+.+.|+ -.+........|+++.+|+|-.++...+. +...++|..+.+.++|.+ |.+..|++.+.
T Consensus 312 ---~~~i~~~klLH~~-e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~ 387 (412)
T PF01306_consen 312 ---PWVISLIKLLHAL-EFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGL 387 (412)
T ss_dssp ---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHH
Confidence 9999999999999 88899999999999999988877777764 678888888888888876 66778889998
Q ss_pred HHHHHHHHHHHhcCCCCCC
Q 016048 176 GSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 176 ~~~~~~~~~~~~~~e~~~~ 194 (396)
+.+...++..+.+++++++
T Consensus 388 iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 388 IVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHheeeecCCCcc
Confidence 8888888887888765543
No 209
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.06 E-value=8.3e-08 Score=87.54 Aligned_cols=303 Identities=15% Similarity=0.077 Sum_probs=185.7
Q ss_pred HHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcC
Q 016048 54 QAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADN 133 (396)
Q Consensus 54 ~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 133 (396)
.++-+....+..++.+.+.|+.|.|..+.++........+..-+-++ +-++..-.+.|+ |.+..+...-.+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~-Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGF-GAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhh-hHHheecccceehhhc
Confidence 66667778888899999999999999999999999888777766654 667889999999 8898899999999999
Q ss_pred CCcccchhHHHHHHHhhhhhhHHHHHHHHHh------------hhH-HH-------H---HHHHHHHHHHHHHHHHhcCC
Q 016048 134 VPPGRRASVFGIFSGIVSGAFVCGTISARFI------------STS-AA-------F---QAATAGSIISAVYMRIFLPE 190 (396)
Q Consensus 134 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~------------~~~-~~-------f---~~~~~~~~~~~~~~~~~~~e 190 (396)
.++|++.+..++.-+....+.++|..+-..+ +.+ .. + .+.+++.....+...-...+
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999888888888886665443 111 11 1 11111111111101011111
Q ss_pred CCCCcccccccccchhhhhhhhhhhhhhhhh-hccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhh
Q 016048 191 SVRDEDLYTPILSSKAEISASCEESTKKLQV-FKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAK 269 (396)
Q Consensus 191 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
+.+... .+.+.. ....+..+...+.+ +++++..+....+..++.........|..+.-.
T Consensus 211 p~~~~~-------------------~~~~~~~~~~~~~l~~~~~l~-~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft 270 (461)
T KOG3098|consen 211 PSKDVV-------------------NCKSSSETSFSELLKLTFKLL-KTPKMLLLFPFFFYTGLETSFWISIYPTCISFT 270 (461)
T ss_pred Cccchh-------------------hhhhhccccHHHHHHHHHHHh-cCHhHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence 111100 000000 11112234444445 356666555555544444343444444433222
Q ss_pred --ccccc-cchhhHHHHHHHHHHHHHHHHHHhhhhh---hcchhHHHHHHHHHHHHHHHHHHhhh---------------
Q 016048 270 --FHFNK-NQFADLMVIAGIAGTISQLIMMPVLAPT---VGEARLLSFGLLFGCVHMFLYSVAWS--------------- 328 (396)
Q Consensus 270 --~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~i~~~~~~~~~~--------------- 328 (396)
.+.+. .-.+......+.+.+++. ...+.+.|| +|+++....+..+..+..++.....+
T Consensus 271 ~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~ 349 (461)
T KOG3098|consen 271 RKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLF 349 (461)
T ss_pred hhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccc
Confidence 22222 224445555666666666 333456554 57788888887777666666544211
Q ss_pred ---h-hHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhh
Q 016048 329 ---S-WVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLA 383 (396)
Q Consensus 329 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 383 (396)
. ...++.++.|.+-.......+.++.+.. +++|.++.++...-..+++.++-..
T Consensus 350 ~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 350 TPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred ccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 1 1222345567777788888999999999 4888888888877777766654433
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.05 E-value=4.8e-09 Score=97.28 Aligned_cols=128 Identities=14% Similarity=0.064 Sum_probs=106.7
Q ss_pred hHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHH
Q 016048 261 SMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFS 339 (396)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~ 339 (396)
.+|. ..+.+|.+..+.+...+.+.++..+++ +..|.++||+|||+++..+..+..++.+.....++.+...+ -++.|
T Consensus 38 ~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 115 (413)
T PRK15403 38 GIIN-VVRDFNADVSLAPASVSLYLAGGMALQ-WLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG 115 (413)
T ss_pred CHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3444 345679999999999999999999999 67789999999999999999999888888888777655544 45556
Q ss_pred HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 340 ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++.+...+.......|.+|+++++++.++.+....++..++|.+++.+.++
T Consensus 116 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~ 166 (413)
T PRK15403 116 TSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF 166 (413)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666655667778899999999999999999999999999999999988765
No 211
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.04 E-value=1.9e-09 Score=97.47 Aligned_cols=156 Identities=13% Similarity=0.192 Sum_probs=133.9
Q ss_pred cCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcc----ccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHH
Q 016048 236 KSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFH----FNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-GEARLLS 310 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~ 310 (396)
+++|.++.++..-+.--+++|++...+..|+....+ +|.+++..++..++...-+.. +++|+++||+ |+|+.+.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchhHHHH
Confidence 357788888888899999999999999999988887 999998888888888777777 8889999995 9999999
Q ss_pred HHHHHHHHHHHHHHHhh--hhhHHH-HHHHHHHhhhhhhhhhhHHHhhccCCc--cchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 311 FGLLFGCVHMFLYSVAW--SSWVPY-AAAVFSILSVFSHPCLRTIVSKQVASN--EQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 311 ~~~~~~~i~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
.+.+++.++.++++... ...... ...++.++.|..=|...+++.|.+|++ +|-.++++..+..++|+.++|.+.+
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHH
Confidence 99999999999998874 333333 356667899999999999999999876 4777899999999999999999999
Q ss_pred hhhhccc
Q 016048 386 PLTGDCR 392 (396)
Q Consensus 386 ~l~~~~~ 392 (396)
++.+++.
T Consensus 177 ~~~~~~g 183 (498)
T COG3104 177 LLAINYG 183 (498)
T ss_pred HHHHhhC
Confidence 9988764
No 212
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.02 E-value=4.8e-09 Score=95.46 Aligned_cols=131 Identities=9% Similarity=-0.108 Sum_probs=97.1
Q ss_pred hhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HH
Q 016048 258 LQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AA 336 (396)
Q Consensus 258 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~ 336 (396)
+...+|.+. +++|+|+.+.++..+...++..+++ +..|++.||+|||+++..+......+........+.+.... -+
T Consensus 10 ~~~~lp~i~-~~~~~s~~~~g~~~s~~~~g~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 10 FSPVLSLVA-EDIDVSKEELGLLAITYPAAFLALT-IPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHhhHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 344455554 4579999999999999999999999 66789999999998876655555444332222233333333 45
Q ss_pred HHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 337 VFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
+.|++.+. .+......+|.+|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 88 l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~ 141 (368)
T TIGR00903 88 LAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG 141 (368)
T ss_pred HHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 55666664 4555566689999999999999999999999999999999987653
No 213
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=3.5e-09 Score=93.57 Aligned_cols=135 Identities=15% Similarity=0.084 Sum_probs=108.6
Q ss_pred hhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhh---H
Q 016048 255 DAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSW---V 331 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~---~ 331 (396)
......-+...+++.+|+|+.|.+++.+...+.+.+.+ +..+.+.||+|.|++...+.++..+-.+.+.+..+.+ .
T Consensus 29 VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallR-l~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ 107 (417)
T COG2223 29 VWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLR-LPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ 107 (417)
T ss_pred HHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHH-HHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 33444455556668899999999999999999999999 5567999999999999999999999988888876655 3
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 332 PYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.+-++....+..+......+++-+|+|++|.++|+.. .+++|..+...+.+.+....
T Consensus 108 ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 108 LLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 333333333346678889999999999999999999998 88888888887777766544
No 214
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.01 E-value=1.1e-09 Score=99.75 Aligned_cols=136 Identities=14% Similarity=0.108 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHh-HHHHhhhhcccccccccCCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIG-LGTLVMMPLVGNLSDKYGRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~-l~~~~~~~~~G~l~Dr~Grk~~~~~~~ 85 (396)
++.+.+..++...........+|.+..+ .+.+..+.|.+.++.. ++..++.+++|++.||+|||+.+..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 282 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD--------MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFG 282 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 4444555555566666666777877544 3566678888777665 577899999999999999999999888
Q ss_pred HHhHHHHHHHHhc-cCc-------hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhh
Q 016048 86 TLSIIPLAILAYS-RSR-------NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVS 151 (396)
Q Consensus 86 ~~~~~~~~~~~~~-~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 151 (396)
++.+++..+..+. .+. .+.+.+..+.++.++ +.+...+...+++.|.+|+|+|++.+++.+...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 283 IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAV-TGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8887776655543 111 126777888889998 8899999999999999999999999999887654
No 215
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.01 E-value=2.4e-09 Score=101.09 Aligned_cols=150 Identities=13% Similarity=0.133 Sum_probs=106.3
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+.+..++...++............+.+..... + +....+++.++..++.+++.+++++++||+|+|+.+..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~-------~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~ 302 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVI-------G-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGA 302 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEEC-------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 44555566666666666666666554533321 1 123456777777788899999999999999999999988
Q ss_pred HHHhHHHHHHHHh---ccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-------cccchhHHHHHHHhhhhhh
Q 016048 85 ITLSIIPLAILAY---SRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-------PGRRASVFGIFSGIVSGAF 154 (396)
Q Consensus 85 ~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~ 154 (396)
..+..++.+...+ ... ...+.+++.-++.|+ +.+...+...++++|..+ +++.|..++......-+|.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~g~-~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLAAP-HNALLIVIAGILLNI-GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH
Confidence 8777766655433 121 125667777788888 888888889999999976 2334557888888888888
Q ss_pred HHHHHHHHHh
Q 016048 155 VCGTISARFI 164 (396)
Q Consensus 155 ~~g~~~~~~~ 164 (396)
.+++.+.+.+
T Consensus 381 al~~~i~g~~ 390 (473)
T PRK10429 381 AFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 216
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.01 E-value=6.9e-09 Score=96.05 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=90.4
Q ss_pred cchhHHHHHHHHHHHHh-HHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHH---HhccCchhHHHHHHHH----HH
Q 016048 42 ECSLAIYLSGFQQAIIG-LGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAIL---AYSRSRNFFYAYYVLR----TL 113 (396)
Q Consensus 42 ~~~~s~~~~g~~~s~~~-l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~r----~l 113 (396)
+.+.+..+.|++.+... .+..++.++.|++.||+|||+.+..+..+..+..+.. ++.++. .+.+.+.- +.
T Consensus 239 ~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~ 316 (402)
T PRK11902 239 GAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH--LWTMALAIGIENLC 316 (402)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHH
Confidence 34667778888876654 5688999999999999999998887776665554333 344321 45554444 34
Q ss_pred HhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHH----HHhhhHHHHHHHHHHHHHHHHHH
Q 016048 114 TAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISA----RFISTSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 114 ~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~----~~~~~~~~f~~~~~~~~~~~~~~ 184 (396)
.|+ +.+...+....++.+..|+++++. .+...++|..+++.++ ..+||+..|.+.++++++..++.
T Consensus 317 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 317 GGM-GTAAFVALLMALCNRSFSATQYAL----LSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHH-HHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 555 556667777888888888766554 3333344444333344 44589999999888887765554
No 217
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.98 E-value=2.3e-09 Score=83.08 Aligned_cols=108 Identities=15% Similarity=0.128 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCcc
Q 016048 283 IAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNE 361 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~ 361 (396)
...++..++. +..+++.||++||+.+..+.....++.+......+.+.... ..+.+++.+...+....+..|..|+++
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 4566677777 66789999999999999988888888777776665554444 455677778888999999999999999
Q ss_pred chhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 362 QGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 362 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
|+++.++.+....++..++|.+.+.+.+..
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 114 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFL 114 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhccc
Confidence 999999999999999999999999988754
No 218
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=3.5e-09 Score=91.98 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=97.7
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 271 HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLR 350 (396)
Q Consensus 271 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (396)
+-+..-.|.+-+.+++...+.+ ...|.++||+|||.++..|....++...+.+...+.......=+.+...-+......
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS-~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISS-PLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhh-hhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH
Confidence 3355567888999999999999 777899999999999999999999988888888776322222223333344557789
Q ss_pred HHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 351 TIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 351 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
++++|++++|+|+.+++.++....+|-++||.++|++.+
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999999999999999999999999999999999987
No 219
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.94 E-value=1.2e-08 Score=90.47 Aligned_cols=152 Identities=10% Similarity=0.008 Sum_probs=112.1
Q ss_pred HHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHH
Q 016048 11 FITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSII 90 (396)
Q Consensus 11 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~ 90 (396)
.+..|+...........++.|..+ ..+++.+..+.++..+.+..+..++.++.+++.||+|+||.+..+..+..+
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~-----~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSD-----PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 444444444555666677888754 234577788999999999999999999999999999999999888888888
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh----hh
Q 016048 91 PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI----ST 166 (396)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~----~~ 166 (396)
+.++....++ ... ...-.+.|+ +.+..+|...+...+..|++ .+++.++. ....+|..+.|.+.+.+ +.
T Consensus 221 ~~~l~~~~~~---~~~-~~~~~l~g~-~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 221 LSIGAALTHG---YVA-MWFVLALGL-FNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred HHHHHHHcCC---HHH-HHHHHHHHH-HHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 7766666555 322 235557888 88999999999998888743 45566665 55668889999877776 34
Q ss_pred HHHHHHHH
Q 016048 167 SAAFQAAT 174 (396)
Q Consensus 167 ~~~f~~~~ 174 (396)
+..|++..
T Consensus 294 ~~a~~v~~ 301 (310)
T TIGR01272 294 QLAFALPV 301 (310)
T ss_pred hHHHHHHH
Confidence 55555333
No 220
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.93 E-value=4e-09 Score=99.03 Aligned_cols=172 Identities=17% Similarity=0.253 Sum_probs=145.1
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccC--Cchhhh
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYG--RKALLT 82 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G--rk~~~~ 82 (396)
+.++.+.+...+..++.......+|.+.. +.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~--------~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK--------SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 45566677788888888888788888844 45666678999999999999999999999999988 556667
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
++.+..+++...+++.++ ++.+.....+.|+ +.|.........+.|..+.++-..+.|+.....+++.++||++++
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~-~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGF-CVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 788888888889999999 9999999999999 888888888889999999999999999999999999999999999
Q ss_pred Hh-----hhHHHHHHHHHHHHHHHHHHHHhcC
Q 016048 163 FI-----STSAAFQAATAGSIISAVYMRIFLP 189 (396)
Q Consensus 163 ~~-----~~~~~f~~~~~~~~~~~~~~~~~~~ 189 (396)
.+ +|...|+..++..++..... +..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~~-~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVLL-LILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHHH-HHhH
Confidence 76 47778888888777766543 3344
No 221
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=6.5e-09 Score=94.53 Aligned_cols=144 Identities=11% Similarity=0.097 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-CCchhhhHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALLTVPIT 86 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~~~~~~ 86 (396)
+.+.+..++...........+|.+.++ .+.+..+.+...+...++.+++.++.|+++||+ +||+.+..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~lp~~~~~--------~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~ 271 (355)
T TIGR00896 200 WQVTVFFGLQSGLYYSLIGWLPAILIS--------HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAV 271 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Confidence 333333444444444555667777544 245567889999999999999999999999999 56777777888
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-cccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-PGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
+.+++.+...+.++ ..... .-.+.|+ +.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+
T Consensus 272 ~~~~~~~~~~~~~~---~~~~~-~~~l~g~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 272 LQLVGLCGLLFAPM---HGLWA-WALVLGL-GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHHHHHHHHhhh---hHHHH-HHHHHHH-hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777655 22222 4567798 888888887777765554 56678888998888888889999888876
No 222
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=3.1e-08 Score=91.15 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=111.1
Q ss_pred chhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHH------HHHHHHHHHhh
Q 016048 43 CSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFY------AYYVLRTLTAM 116 (396)
Q Consensus 43 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~r~l~G~ 116 (396)
.+++..+.-+..........+..+++..+.||+|||+.++.+..++.+..+++.......... ..+++.++..+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFII 379 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 345556677778888888899999999999999999999999999888887776542211011 12344444443
Q ss_pred hccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHH----HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016048 117 VCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCG----TISARFISTSAAFQAATAGSIISAVYMRIFLPESV 192 (396)
Q Consensus 117 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g----~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~e~~ 192 (396)
..+-+..|...-+.+|.+|++.|..+++.......+...+- |.+-..+|- +.|....+.+.+..+..++.+||++
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 22234467888999999999999999988877766665543 444444555 7778888888888888999999997
Q ss_pred CCcc
Q 016048 193 RDED 196 (396)
Q Consensus 193 ~~~~ 196 (396)
.+..
T Consensus 459 gr~~ 462 (485)
T KOG0569|consen 459 GRTP 462 (485)
T ss_pred CCCH
Confidence 6543
No 223
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.92 E-value=2e-08 Score=93.72 Aligned_cols=150 Identities=16% Similarity=0.224 Sum_probs=125.3
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
++|++..++...++..++..+..+..+.+.++..+.+ ...+....+..++..++.+++++++||+|+|+.+.
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~--------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~ 294 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE--------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI 294 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh
Confidence 4466777888888899999998888888877754322 24577777889999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhcc--CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-------ccchhHHHHHHHhhhhh
Q 016048 83 VPITLSIIPLAILAYSR--SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-------GRRASVFGIFSGIVSGA 153 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g 153 (396)
.+.++.+++.++..+.+ + .+.+++.-++.|+ +.+...+...++++|..+. ++.|..++..+....+|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi-~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGPGS---PWLVLILFILAGI-GYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred hhHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHh-hhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 99999999999888886 6 8899999999999 8899999999999999874 33477788888888888
Q ss_pred hHHHHHHHHHh
Q 016048 154 FVCGTISARFI 164 (396)
Q Consensus 154 ~~~g~~~~~~~ 164 (396)
..+++.+.+.+
T Consensus 371 ~~la~~i~g~~ 381 (428)
T PF13347_consen 371 QGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHHHHH
Confidence 88887776654
No 224
>PTZ00207 hypothetical protein; Provisional
Probab=98.92 E-value=5.4e-08 Score=92.44 Aligned_cols=129 Identities=6% Similarity=0.077 Sum_probs=94.8
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHh------hhh
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVA------WSS 329 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~------~~~ 329 (396)
+.+..+.+ .+++.+|+|..+.+.+..... .....+ +..|++.||+|+|+++.++.++..++.++.++. .+.
T Consensus 44 y~fsv~s~-~L~~~lgls~~~l~~i~svg~-~~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 44 YAFNLISG-AMQARYNLTQRDLSTITTVGI-AVGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHH-HHHHHhCcCHHHHHHHHHHHH-HHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 33443334 456778999999888876533 333455 456899999999999999999999999988876 233
Q ss_pred hHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 330 WVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 330 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
+...+ ..+.+.+.+..++.....+.+.+| ++||++.|+......+|+.+.+.+...++
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333 445567777777777888888887 78999999999999999986444444443
No 225
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.92 E-value=2.2e-08 Score=83.65 Aligned_cols=147 Identities=18% Similarity=0.180 Sum_probs=112.6
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
..++.+.+..++.+..+.=....-|.+..| .+++|+...+-+.+.-....++.+++.|.++||+|++-..+.+
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~-------rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~ 336 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQK-------RFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS 336 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-------hhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH
Confidence 456777777777777766555555666544 5678888888888888888999999999999999999998886
Q ss_pred HHHhHH-HHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH
Q 016048 85 ITLSII-PLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF 163 (396)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 163 (396)
..+..+ +-....++ ++.=+++..+.|+ +.+..-......++...|+++.|.+.+..+...++|..+.|+++++
T Consensus 337 a~~~tl~~H~~l~Ft-----~lsPy~~m~~lGL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFT-----FLSPYTSMTFLGL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHHHHhhhHHhh-----hccHHHHHHHHhh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 655443 33444443 2223356677788 6555554566778889999999999999999999999999999998
Q ss_pred h
Q 016048 164 I 164 (396)
Q Consensus 164 ~ 164 (396)
+
T Consensus 411 i 411 (459)
T KOG4686|consen 411 I 411 (459)
T ss_pred e
Confidence 7
No 226
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.91 E-value=4.8e-08 Score=93.15 Aligned_cols=117 Identities=13% Similarity=0.069 Sum_probs=96.9
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh------hhHH-HHHHHHHHhhhh
Q 016048 272 FNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS------SWVP-YAAAVFSILSVF 344 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~------~~~~-~~~~~~~~~~~~ 344 (396)
.+..+.+.+.+...++..++. ++.+++.||+|||+.+..+.++..++.++.....+ .+.. ..-++.|++.+.
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~-~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQ-LFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 445566788888999999999 77789999999999999998888888777766543 2222 235566888999
Q ss_pred hhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 345 SHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 345 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
..+....++.|.+|+++||++.++.+....+|..+++.+...+..
T Consensus 132 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred hhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988876543
No 227
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.91 E-value=6e-07 Score=86.88 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=103.6
Q ss_pred hhHHHHHHHHHHHHhHHHHhhhhcccccccc-cCCchhhhHHHHHhHHHHHHHHhccCc-----hhHHHHHHHHHHHhhh
Q 016048 44 SLAIYLSGFQQAIIGLGTLVMMPLVGNLSDK-YGRKALLTVPITLSIIPLAILAYSRSR-----NFFYAYYVLRTLTAMV 117 (396)
Q Consensus 44 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~ 117 (396)
+.+......+...+....-+...++|.++|+ +||++.+.++.++..++..+.+++... ......+++-.+..+
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~- 97 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL- 97 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh-
Confidence 4444555556666666666777889999996 599999999999999999888775321 112335566666676
Q ss_pred ccchhhHHHHHHHhcCCCccc---chhHHHHHHHhhhhhhHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHH
Q 016048 118 CEGSIHCLSLAYVADNVPPGR---RASVFGIFSGIVSGAFVCGTISARFI-----------STSAAFQAATAGSIISAVY 183 (396)
Q Consensus 118 ~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~~-----------~~~~~f~~~~~~~~~~~~~ 183 (396)
|.|+.-|...+...|-+++++ |.+.+.++..+.++|.++++.+..++ +|+..|.+.++..++..++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 889999999999999988653 56677788888899998887776654 3778888888877776654
Q ss_pred H
Q 016048 184 M 184 (396)
Q Consensus 184 ~ 184 (396)
.
T Consensus 178 f 178 (654)
T TIGR00926 178 F 178 (654)
T ss_pred H
Confidence 4
No 228
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=3.3e-08 Score=81.83 Aligned_cols=317 Identities=11% Similarity=0.042 Sum_probs=159.9
Q ss_pred HHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHH
Q 016048 12 ITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIP 91 (396)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~ 91 (396)
...++...+.....|.+-.... +.+...-++|.+.....-..++...+.|.++||-|||+.-+.-++...++
T Consensus 44 lVyslmmAgDWLQgPYvYyLYs--------tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs 115 (454)
T KOG4332|consen 44 LVYSLMMAGDWLQGPYVYYLYS--------TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS 115 (454)
T ss_pred HHHHHHHhhhhhcCceeeeeeh--------hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH
Confidence 3444555556666776544422 22222234555555555566777778899999999999765544444333
Q ss_pred HHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHH-HhcCCCcccchhHHHHHHHhh----hhh----hHHHHHHHH
Q 016048 92 LAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAY-VADNVPPGRRASVFGIFSGIV----SGA----FVCGTISAR 162 (396)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~~~~----~~g----~~~g~~~~~ 162 (396)
++ .-.++. +-.+.++|.+-|+ +.+....+-.++ ++|.-+ +|+.---+..... -.| .+++.+.+.
T Consensus 116 Ci-TKhSpq---YkVLmVGR~LGGi-aTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn 188 (454)
T KOG4332|consen 116 CI-TKHSPQ---YKVLMVGRVLGGI-ATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGN 188 (454)
T ss_pred HH-hhcCCc---eEEEeehhhhhhH-HHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHH
Confidence 32 334455 8889999999999 878777777776 566553 3332222221111 122 222222222
Q ss_pred Hh------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhc
Q 016048 163 FI------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLK 236 (396)
Q Consensus 163 ~~------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
.+ |.-.+|-..+....+...++.---.|.-.+.. ++++. ....+...+.+.
T Consensus 189 ~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps--------------------~~kdl---ltqf~gaa~aia 245 (454)
T KOG4332|consen 189 LLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPS--------------------ENKDL---LTQFKGAARAIA 245 (454)
T ss_pred HHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChh--------------------hhHHH---HHHhhHhHHHHh
Confidence 22 33455655544443333222121122111111 00000 001222222233
Q ss_pred CChhHHHHHHHHHHHHHhhhh-hhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcch--hHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAG-LQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEA--RLLSFGL 313 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~~~~~~ 313 (396)
.++++..+-....+.-...+. ..-|-|..-.+ -...--|.+++.+.+..++++ -+..++..|-..| ....+.+
T Consensus 246 SD~ki~LLG~iqsLFE~smytFVFLWTPaLspn---~e~iPhGfiFatFMlASmLGS-Sla~Rl~s~s~~~ve~ymqivf 321 (454)
T KOG4332|consen 246 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN---DEEIPHGFIFATFMLASMLGS-SLASRLLSRSSPKVESYMQIVF 321 (454)
T ss_pred cchHHHHHHHHHHHHhhhhheeeeeecccCCCC---cccCCchhHHHHHHHHHHHhh-HHHHHHHhcCCcccchHHHHHH
Confidence 445544433333222222222 22222222111 111234788888888899988 5555565554332 3344444
Q ss_pred HHHHHHHHHHHHhh----h---h-hHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHH
Q 016048 314 LFGCVHMFLYSVAW----S---S-WVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCIS 370 (396)
Q Consensus 314 ~~~~i~~~~~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 370 (396)
.+....+.+..... + + ...+..+++-...+..+|...-+-++..|++.|++.+-...
T Consensus 322 ~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFR 386 (454)
T KOG4332|consen 322 LVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFR 386 (454)
T ss_pred HHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhhee
Confidence 44444443333222 1 1 12233445567788899999999999999999988766543
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.90 E-value=5e-09 Score=101.79 Aligned_cols=135 Identities=15% Similarity=0.122 Sum_probs=110.9
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh--------
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW-------- 327 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~-------- 327 (396)
.++....-.-++++++++..+.|++.+...++..++. +..+++.||.+||+.+..+.++.+++.+++++..
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 3333333344567789999999999999999999999 5667999999999999999999999988876542
Q ss_pred -----------------------------------------h-hhH-H-HHHHHHHHhhhhhhhhhhHHHhhccCCccch
Q 016048 328 -----------------------------------------S-SWV-P-YAAAVFSILSVFSHPCLRTIVSKQVASNEQG 363 (396)
Q Consensus 328 -----------------------------------------~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 363 (396)
+ .+. . ..-++.|++.+..++...+++.|.+|+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 0 111 1 2245567888888999999999999999999
Q ss_pred hHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 364 KAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 364 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.|+.+....+|..+|+.+++.+.+.+
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 9999999999999999999999988764
No 230
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.90 E-value=5.3e-09 Score=93.36 Aligned_cols=150 Identities=11% Similarity=0.153 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
....++++..+...-.+.+-...+- .++.+|.+++..|++.....+..+++. ++.|++.||++|++++.+|..+-.++
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 3444444444444433433332222 345579999999999999999999999 77789999999999999999999999
Q ss_pred HHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 320 MFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.+.-++....|...+ -.+.|+|.+...|...++++|.+|+++|++++++.+.....|..+|-..++.+.++.
T Consensus 112 v~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 112 VFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 999999877777666 566799999999999999999999999999999999999999998877777666554
No 231
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=2.2e-08 Score=93.93 Aligned_cols=151 Identities=15% Similarity=0.052 Sum_probs=102.2
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
++.++.++...++...+........+.+..+..+ . ....+.+.....+..+++.+++++++||+|+|+.+..
T Consensus 228 n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-------~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~ 299 (444)
T PRK09669 228 NSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-------R-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKW 299 (444)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-------C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 3445555555555555555444444444333221 1 1233455566678888899999999999999999998
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-------ccchhHHHHHHHhhhhhhHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-------GRRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~ 156 (396)
+.++.++......+.+. ++.+.+++..++.|+ +.+...+...++++|..+. ++.|..++.......+|..+
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~g~-~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~al 377 (444)
T PRK09669 300 TIVAFVILSALIFFIPP-SNVWLIFALNILFNF-IQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAI 377 (444)
T ss_pred HHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHH
Confidence 87766654443333221 116777888889999 8889999999999998862 22355678888888899999
Q ss_pred HHHHHHHh
Q 016048 157 GTISARFI 164 (396)
Q Consensus 157 g~~~~~~~ 164 (396)
|+.+++.+
T Consensus 378 g~~i~g~l 385 (444)
T PRK09669 378 GGAVVGWI 385 (444)
T ss_pred HHHHHHHH
Confidence 98888764
No 232
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.89 E-value=4e-08 Score=91.26 Aligned_cols=145 Identities=13% Similarity=0.062 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhh----hhcchhHHHH-HHHH
Q 016048 241 FSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAP----TVGEARLLSF-GLLF 315 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~~~~~~~-~~~~ 315 (396)
+..+....+...+.+.....+++.|+++ +|.++...+.+.....+...+.+ ++.|+++| |+|||+.... +...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~-Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQ-PLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 4444445555566666677788888754 69999999999999999999999 77789999 5999988766 4666
Q ss_pred HHHHHHHHHHhhhhh-----------------HHHH-HHHHHHhhhhhhhhhhHHHhhccCCccc--hhHhhhHHHHHHH
Q 016048 316 GCVHMFLYSVAWSSW-----------------VPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQ--GKAQGCISGICSF 375 (396)
Q Consensus 316 ~~i~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~ 375 (396)
..+++.++++..+.. .... ..+..+......+...+++.|.+|+++| +.++++.+....+
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 667777776654321 1111 2223446666778889999999998865 6799999999999
Q ss_pred HHHhhhhhhhhh
Q 016048 376 ANLVSPLAFSPL 387 (396)
Q Consensus 376 g~~~~~~~~g~l 387 (396)
|+.+++.+++..
T Consensus 164 G~ilg~~~g~~~ 175 (477)
T TIGR01301 164 GNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 233
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.88 E-value=1.7e-08 Score=95.41 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=103.6
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh--hhhHHHH-HHHHHHhhhhh
Q 016048 269 KFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW--SSWVPYA-AAVFSILSVFS 345 (396)
Q Consensus 269 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~-~~~~~~~~~~~ 345 (396)
++++++.+.|.+.+...++..+++ +..|++.||+|+|+.+..+.++..++.++..... +.+..++ -++.|++.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQ-IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHH-cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccc
Confidence 468899999999999999999999 7778999999999999999888888777665432 2323333 56668888999
Q ss_pred hhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 346 HPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 346 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.|....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998876
No 234
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.88 E-value=6.3e-08 Score=85.78 Aligned_cols=162 Identities=20% Similarity=0.283 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI 89 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~ 89 (396)
.....+....+.....+..+.+..+...... . .+.++..+.+.++..+++++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSG-----R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCch-----h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 4445555556777777777777555321111 0 467899999999999999999999999999988888887666
Q ss_pred HHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-ccchhHHHHHHH-hhhhhhHHHHHHHHHh---
Q 016048 90 IPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-GRRASVFGIFSG-IVSGAFVCGTISARFI--- 164 (396)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~~--- 164 (396)
++.++..+..+ ...+.+++.|..+|+ +.+...+...+++.|+.|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGL-GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666655 338889999999999 8888999999999999998 688888888888 5888888888777654
Q ss_pred ---hhHHHHHHHHHHHHH
Q 016048 165 ---STSAAFQAATAGSII 179 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~ 179 (396)
+||..|.........
T Consensus 159 ~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 159 LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HhcchHHHHHHHHHHHHH
Confidence 577766555554443
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.85 E-value=1.3e-08 Score=95.81 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=102.7
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhc----------cCchhHHHHHH
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYS----------RSRNFFYAYYV 109 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~ 109 (396)
...++.++.+.|+..+...++.+++....+++.+|++.|+++.++.++.+++.+..... ++ .+.+..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~---~~~~~~ 356 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD---EVFVLG 356 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCC---eeeeee
Confidence 34678888999999999999999999999999999999999999999998887654321 22 334555
Q ss_pred HHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 110 LRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 110 ~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.-++.++ +.+........++.+.+|+++++...++.....++|..+++.+++.+
T Consensus 357 ~~~l~~~-~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 357 DSIIAEV-LAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred hhHHHHH-HHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677887 77777888899999999999999999999999999999999888876
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.4e-07 Score=83.16 Aligned_cols=146 Identities=14% Similarity=-0.011 Sum_probs=121.1
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
...+.+..+......+..+.+.+++.++++..+++.+......+-.+.. +..+++.+|+|.|+-+..++.++++++.++
T Consensus 17 ~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~-lpa~~~~kk~gyk~gi~lgL~l~avg~~lF 95 (422)
T COG0738 17 LLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMS-LPAGLLIKKLGYKAGIVLGLLLYAVGAALF 95 (422)
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3334444455556667777788899999999999999999988888888 666899999999999999999999999988
Q ss_pred HHhhh---hhHHHH-HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 324 SVAWS---SWVPYA-AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 324 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
.-+.+ ...... .++++.|.+......+.++..+-|++....-..+.+.++.+|.+++|.+++.+..+
T Consensus 96 ~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 96 WPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred hhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 64433 222222 56678888899999999999999999889999999999999999999999999874
No 237
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.76 E-value=1.7e-06 Score=73.09 Aligned_cols=150 Identities=15% Similarity=0.124 Sum_probs=106.2
Q ss_pred CCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCc----hhHHHHHHHHHHHh
Q 016048 40 RDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSR----NFFYAYYVLRTLTA 115 (396)
Q Consensus 40 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G 115 (396)
++.++.+.+|...+.....+|..+| ++.|.+.||+|+|.++.++.+...++..+...+-+. .++|.+.+..++.|
T Consensus 29 k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 29 KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence 4467788889999999999998874 889999999999999999999999998877654221 23777877777877
Q ss_pred hhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh-h-h-HHHHHHHHHHHHHHHHHHHHhcCCCC
Q 016048 116 MVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-S-T-SAAFQAATAGSIISAVYMRIFLPESV 192 (396)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-~-~-~~~f~~~~~~~~~~~~~~~~~~~e~~ 192 (396)
. +.+...........+.+| ++||.+.|+.-...+++..+-..+...+ + . ..-+.+.+....+..+...+++++.|
T Consensus 108 ~-s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 108 N-SSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred c-cHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 7 656666666666667887 6899999999999888877655554433 2 2 22333334433333333334555443
No 238
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.75 E-value=1.9e-06 Score=75.14 Aligned_cols=352 Identities=12% Similarity=0.014 Sum_probs=193.5
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc-----ccCC
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD-----KYGR 77 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Gr 77 (396)
.++++..+.....+.+.-.+... .+|.+++.. +.|.+..+...-++. . .---++|.++.| |+||
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~Gr 97 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGR 97 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhcc
Confidence 34567777888888888888888 778886531 333334443222211 1 112357899999 9999
Q ss_pred chhhhH-HHHHhHHHHHHHHhccCc--------hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHH
Q 016048 78 KALLTV-PITLSIIPLAILAYSRSR--------NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSG 148 (396)
Q Consensus 78 k~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 148 (396)
||..++ +..+.+......+...+. +....+....++.-+ ..+.--.+...+.-.+.++++.|.+......
T Consensus 98 rksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnf-laAtQDIAVDgwALtmLs~e~lgyaST~q~V 176 (510)
T KOG3574|consen 98 RKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNF-LAATQDIAVDGWALTMLSRENLGYASTCQSV 176 (510)
T ss_pred ccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHH-HHhhhhhhhhHHHHHhcCHhhcCchhHHHHH
Confidence 998777 444444444444332221 012333334455555 5566666778888888888999888777777
Q ss_pred hhhhhhHHHHHHHHHh-----------hh---------HHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhh
Q 016048 149 IVSGAFVCGTISARFI-----------ST---------SAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEI 208 (396)
Q Consensus 149 ~~~~g~~~g~~~~~~~-----------~~---------~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~ 208 (396)
+.+.|..+|..+--.+ +| ..-.++.+.+..+...+..+.-+|.+.+.+
T Consensus 177 g~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~------------ 244 (510)
T KOG3574|consen 177 GQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVD------------ 244 (510)
T ss_pred HHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh------------
Confidence 7777776664332111 12 112334444444444444333333222111
Q ss_pred hhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHH
Q 016048 209 SASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAG 288 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 288 (396)
++.+...+..++-+++.+ +-|....+.......-..+.+-....+.-+.|. |.+..+.+......--.+
T Consensus 245 ---------~e~~~~i~~~yk~l~~vL-klk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~~plq 313 (510)
T KOG3574|consen 245 ---------EELELGIHESYKLLRDVL-KLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPLVPLQ 313 (510)
T ss_pred ---------hhhhcCHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeehhhHH
Confidence 001111111232333333 456666666666666667777676677777765 998887665553333333
Q ss_pred HHHHHHHHHhhhhhhcchhHH------HHHHHHHHHHHHHHHHhhhh-------h-HHHH--H---HHHHHhhhhhhhhh
Q 016048 289 TISQLIMMPVLAPTVGEARLL------SFGLLFGCVHMFLYSVAWSS-------W-VPYA--A---AVFSILSVFSHPCL 349 (396)
Q Consensus 289 ~~~~~~~~~~l~~~~g~~~~~------~~~~~~~~i~~~~~~~~~~~-------~-~~~~--~---~~~~~~~~~~~~~~ 349 (396)
++....+ |++.. |+|++. ..=.........+..+.+.. . ...+ + .+-.......+...
T Consensus 314 I~l~~~~-gk~ta--~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~ 390 (510)
T KOG3574|consen 314 IALPLYI-GKWTA--GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSG 390 (510)
T ss_pred Hhhhhhh-eeecC--CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHH
Confidence 4433222 22222 122111 11111111222222222210 0 0111 1 11233344455677
Q ss_pred hHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 350 RTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 350 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
++..+++.||...|+.+.+.|...++|+---..+..++.|...
T Consensus 391 maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 391 MAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 8889999999999999999999999999999999999998764
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.75 E-value=3.7e-08 Score=86.26 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=110.5
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhh
Q 016048 271 HFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCL 349 (396)
Q Consensus 271 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 349 (396)
+-+..+.|+++....+.+++.+ ++.|.+.||+|+|..+.+|+.++....+++++..+.+..++ =.+-|++.++.....
T Consensus 102 ~~e~~~iG~LFaskA~~qllvn-p~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVN-PFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred cccccchhHHHHHHHHHHHHhc-ccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 5566789999999999999999 66678999999999999999999999999999988876655 456689999999999
Q ss_pred hHHHhhccCCcc-chhHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 350 RTIVSKQVASNE-QGKAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 350 ~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
.++++|.+|+++ |++++|+.-.+..+|-.++|.++|.+||..+.+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~ 226 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS 226 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCc
Confidence 999999999875 799999999999999999999999999987654
No 240
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.3e-07 Score=86.27 Aligned_cols=152 Identities=15% Similarity=0.156 Sum_probs=116.4
Q ss_pred ccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhh
Q 016048 3 KKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLT 82 (396)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~ 82 (396)
++|++..+++..++...+.++....+..|....+ +.+..+..+.......+.+++.+++.++++|+|+|+++.
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l-------g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~ 306 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL-------GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL 306 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc-------CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH
Confidence 4556667777788888888888888777765543 333355667777777888888999999999999999999
Q ss_pred HHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc-------ccchhHHHHHHHhhhhhhH
Q 016048 83 VPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP-------GRRASVFGIFSGIVSGAFV 155 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~ 155 (396)
++.++..++.++..+.+. ++.+.+++..++.++ +.+...+...++++|..+- +.-|...+......=+|..
T Consensus 307 ~~~~~~~i~~~~~~f~~~-~~~~l~~~~~~i~~~-g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a 384 (467)
T COG2211 307 IGLLLLAVGYLLLYFTPA-GSVVLIVVALIIAGV-GTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA 384 (467)
T ss_pred HHHHHHHHHHHHHHhhcC-cchHHHHHHHHHHHH-HhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 999999999999988873 337888889999998 8899999999999988763 2335556666666666666
Q ss_pred HHHHHHHH
Q 016048 156 CGTISARF 163 (396)
Q Consensus 156 ~g~~~~~~ 163 (396)
++..+.++
T Consensus 385 la~~~~g~ 392 (467)
T COG2211 385 LAGFIPGW 392 (467)
T ss_pred HHHHHHHH
Confidence 66655444
No 241
>PRK11462 putative transporter; Provisional
Probab=98.66 E-value=4.2e-07 Score=85.45 Aligned_cols=150 Identities=8% Similarity=0.001 Sum_probs=91.2
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
|.+..+....++..............+.....+ .. ...+.+...+.++.+++.+++++++||+|+|+++..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-------~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~ 299 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-------TP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWT 299 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 344445545555555555554444444333221 11 1335567778888899999999999999999998765
Q ss_pred HHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC-------cccchhHHHHHHHhhhhhhHHH
Q 016048 85 ITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP-------PGRRASVFGIFSGIVSGAFVCG 157 (396)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g 157 (396)
..+..+..++..+.++.+ .+.+++.-++.|+ +.+...+...++++|..+ +++.|..++......-+|..+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~-~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg 377 (460)
T PRK11462 300 NALLAVISLAMFFVPMQA-SITMFVFIFVIGV-LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFG 377 (460)
T ss_pred HHHHHHHHHHHHHhchhH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 554444344433333321 2234445566787 666766777788888776 2333444566666777777777
Q ss_pred HHHHHHh
Q 016048 158 TISARFI 164 (396)
Q Consensus 158 ~~~~~~~ 164 (396)
+.+++.+
T Consensus 378 ~~i~g~i 384 (460)
T PRK11462 378 GALIGWM 384 (460)
T ss_pred HHHHHHH
Confidence 7666543
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=4.7e-08 Score=88.84 Aligned_cols=166 Identities=14% Similarity=0.219 Sum_probs=135.2
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPIT 86 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~ 86 (396)
+..+++..++.+.+.+.+...+-..++| .+......|........+-++.-++.+++.+|+|+-+++.+++.
T Consensus 373 ~llff~~av~mG~g~~lv~tFLfWHled--------~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 373 ILLFFFVAVVMGAGVGLVFTFLFWHLED--------LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred EEehhHHHHHHHHHHHHHHHHHHHHHhh--------cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence 3445666677777777777777666444 33444567777778888888888999999999999999999999
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHH-hhhhhhHHHHHHHHHh-
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSG-IVSGAFVCGTISARFI- 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~~- 164 (396)
+..+=.+..+..+| .|..+-..+++|+ ..+..+.+..+|+++..||+-|..+.++++. ..++|--+|.++++.+
T Consensus 445 ~~~~Rf~~~S~L~n---~W~vLPieilqgi-t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v 520 (618)
T KOG3762|consen 445 CNVGRFLYYSYLQN---PWMVLPIEILQGI-THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV 520 (618)
T ss_pred HHHHHHHHHHHhcC---chheeeHHHHHHH-HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh
Confidence 99999999999999 8999999999999 9999999999999999999999999998865 4566666777777664
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH
Q 016048 165 ---STSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 165 ---~~~~~f~~~~~~~~~~~~~~ 184 (396)
+-|..|...++.+++.+++.
T Consensus 521 ~~fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 521 ERFGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred eeehhHHHHHHHHHHHHHHHHHH
Confidence 67888888888777765543
No 243
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.63 E-value=1.8e-05 Score=71.97 Aligned_cols=369 Identities=11% Similarity=0.050 Sum_probs=189.2
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHH-HhHHHHhhhhccccccc-----ccCCchh
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAI-IGLGTLVMMPLVGNLSD-----KYGRKAL 80 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~-~~l~~~~~~~~~G~l~D-----r~Grk~~ 80 (396)
+..+.+..++.+.-.++....+|.++++. .-+.|.++.|...-+ +... .-++|.++.| |+||||.
T Consensus 2 ~~lL~~LY~lQGiP~GL~~gsiPflL~~~------~~~~sy~q~~~fSla~~PfS---lKlLWaPiVDs~y~~~~GRRKS 72 (544)
T PF13000_consen 2 IALLVLLYFLQGIPLGLAFGSIPFLLQSM------AKKVSYSQQAIFSLASYPFS---LKLLWAPIVDSVYSKRIGRRKS 72 (544)
T ss_pred eeHHHHHHHHcCcccccccccchhhhccc------cCCCChhHheeeeeeechhH---HHHhhhhhhhhhcccccCCcch
Confidence 45667778888888888877778887661 112333444432111 1111 1234555555 8999999
Q ss_pred hhH-HHHHhHHHHHHHHhccC----------------c---h--hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCccc
Q 016048 81 LTV-PITLSIIPLAILAYSRS----------------R---N--FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGR 138 (396)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~----------------~---~--~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~ 138 (396)
.++ .-.+.++..+..+...+ . . ....+....++.-+ -.+.--.+...+.-...++++
T Consensus 73 WiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~f-l~ATQDIAVDGWALT~Ls~~n 151 (544)
T PF13000_consen 73 WIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVF-LCATQDIAVDGWALTMLSPEN 151 (544)
T ss_pred hhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHH-HHccCCceeehhhhhhcChhh
Confidence 887 33444444444433220 0 0 01122233323333 234444456667777778899
Q ss_pred chhHHHHHHHhhhhhhHHHHHHHHHhh-------h-H------------HHHHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q 016048 139 RASVFGIFSGIVSGAFVCGTISARFIS-------T-S------------AAFQAATAGSIISAVYMRIFLPESVRDEDLY 198 (396)
Q Consensus 139 r~~~~~~~~~~~~~g~~~g~~~~~~~~-------~-~------------~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 198 (396)
++.+......+.+.|..++..+--.++ | | .-..+.+.+.++..+...++-+|.|..+...
T Consensus 152 ~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~ 231 (544)
T PF13000_consen 152 VGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP 231 (544)
T ss_pred cchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc
Confidence 988877777777777776644332221 0 1 1123334444444555545556655332211
Q ss_pred c--ccccchhhhhhhh-hhhhh----hhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcc
Q 016048 199 T--PILSSKAEISASC-EESTK----KLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFH 271 (396)
Q Consensus 199 ~--~l~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (396)
+ ..++.+++..+.. +.+++ .++...-++..+.+++.+ +-|.+..+.+.....-.++..-......-+.|. |
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~il-kLp~V~~li~ilL~~KigF~a~da~T~LKLlEk-G 309 (544)
T PF13000_consen 232 KIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKIL-KLPNVQTLIIILLTAKIGFQANDAVTSLKLLEK-G 309 (544)
T ss_pred cccccccccccccccceecccccccchhhhhhHHHHHHHHHHHH-cCchHHHHHHHHHHHHhccccchhhhHHHHHHc-C
Confidence 1 0010000000000 00000 011111122344444445 467777777777777777776666666666665 9
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhhhhhh--cchh-----------------------------HHHHHHHHHHHH-
Q 016048 272 FNKNQFADLMVIAGIAGTISQLIMMPVLAPTV--GEAR-----------------------------LLSFGLLFGCVH- 319 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~-----------------------------~~~~~~~~~~i~- 319 (396)
++.++.+....+.-=.+++.. +.+.|+ |+++ ....++..-.+.
T Consensus 310 ~~KE~LAl~~li~~P~qii~~-----~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a 384 (544)
T PF13000_consen 310 LSKEDLALLVLIDFPFQIILP-----YYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAA 384 (544)
T ss_pred CCHHHhHHHHHHhhhHHHHHH-----HHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHH
Confidence 998886555444433444444 333332 2221 111111111111
Q ss_pred ---HHHHHHhh-h----hhHHHHH---HHH-HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 320 ---MFLYSVAW-S----SWVPYAA---AVF-SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 320 ---~~~~~~~~-~----~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
.......+ + .+..... -++ .+.....+....++-+++.+|..-|+.+-+.|...++|+---..+.=++
T Consensus 385 ~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~l 464 (544)
T PF13000_consen 385 LLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWL 464 (544)
T ss_pred HHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHH
Confidence 11111111 1 1111111 112 2334455678889999999999999999999999999999888888888
Q ss_pred hhccc
Q 016048 388 TGDCR 392 (396)
Q Consensus 388 ~~~~~ 392 (396)
.|.+.
T Consensus 465 VD~fT 469 (544)
T PF13000_consen 465 VDYFT 469 (544)
T ss_pred hhhcc
Confidence 88764
No 244
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.63 E-value=3.4e-08 Score=85.56 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=97.1
Q ss_pred hHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchh-HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCc
Q 016048 58 GLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNF-FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP 136 (396)
Q Consensus 58 ~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~ 136 (396)
.+....|.++.+++.||+|||+.+..+.+++++..++...+.+.+. ..+++.+|++... .+.+.+.|..|++|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg-----~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG-----AFQVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc-----hheEEEEecCcccch
Confidence 4666778889999999999999999999999999988877755332 2344566666543 345789999999999
Q ss_pred ccchhHHHHHHHhhhhhhHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHhcC
Q 016048 137 GRRASVFGIFSGIVSGAFVCGTISARFI--STSAAFQAATAGSIISAVYMRIFLP 189 (396)
Q Consensus 137 ~~r~~~~~~~~~~~~~g~~~g~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~ 189 (396)
+-|+...|....+.-+|.++.|.++-.. +-..+..+.+.+.++..+.. .++|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIav-cffP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAV-CFFP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHh-eeee
Confidence 9999999999999999999999999433 23345556666666666655 4555
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=2.4e-06 Score=76.13 Aligned_cols=171 Identities=17% Similarity=0.196 Sum_probs=136.1
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccc-ccCCchhhhH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSD-KYGRKALLTV 83 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grk~~~~~ 83 (396)
++....+...++..++.++..+++.+| +.+-++.+..++.-+++....|.+++....|++.. |.++|+.-.+
T Consensus 208 ~~a~~f~~fl~l~t~a~~~QD~iLEPy-------gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~ 280 (403)
T PF03209_consen 208 PQARRFFVFLFLGTLAFFMQDVILEPY-------GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAAL 280 (403)
T ss_pred CChhHHHHHHHHHHHHHHhhHHHcCCc-------hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 344556677778888888888777777 34567888889999999999999999999998877 7788888888
Q ss_pred HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHH
Q 016048 84 PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARF 163 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 163 (396)
++....++..+..++....+.+.+...-++.|+ +.|.+.....+.+.|..++++.|..+|.+.....++..+|..+++.
T Consensus 281 G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~-g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 281 GCLLGALAFALIILAGPLGSPWLFRPGVFLLGL-GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH-hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887766555333337899999999999 9999999999999999999999999999999999888888888876
Q ss_pred h--------------hhHHHHHHHHHHHHHHHHH
Q 016048 164 I--------------STSAAFQAATAGSIISAVY 183 (396)
Q Consensus 164 ~--------------~~~~~f~~~~~~~~~~~~~ 183 (396)
. ++-.+|.+.++..+++..+
T Consensus 360 ~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 360 LRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 4 2344566666655554443
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.58 E-value=1.2e-06 Score=83.70 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=96.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhhhhhhHHHhh
Q 016048 277 FADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSHPCLRTIVSK 355 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 355 (396)
.+++.+...++..++. ++.++++|++|||+.+..+.+...++.++...+.+...... -++.|++.+........+.+|
T Consensus 91 ~s~~~s~~~lga~~g~-l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGS-LLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 3799999999999999 77789999999999999999999999999999988776666 567789999999999999999
Q ss_pred ccCCccchhHhhhHHHHHHHHHHhhhhhhhhhh
Q 016048 356 QVASNEQGKAQGCISGICSFANLVSPLAFSPLT 388 (396)
Q Consensus 356 ~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 388 (396)
..|++.||...+..+....+|..++ .+.+...
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 9999999999999999988887777 4444444
No 247
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.56 E-value=1.2e-06 Score=76.29 Aligned_cols=167 Identities=14% Similarity=0.139 Sum_probs=125.3
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhccccccccc-CCchhhhHHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALLTVPI 85 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~~~~~ 85 (396)
-+.+.+..-+..+..+....-+|.+..| .+.|+.+.|...+...+.++..++....+++|. ++|+..+...
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~--------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILID--------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHH--------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3445555556667777778888998665 478888999999999999999999999999965 6677777788
Q ss_pred HHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccc-hhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 86 TLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRR-ASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
+++.++...+.+.+....++ .-++.|+ +.|..++.....+.+.+++.++ ++..++.+....+=..+||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~l----w~~llG~-G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPIL----WALLLGL-GQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHH----HHHHHhC-ccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 88888888888887632222 2488999 9899999999999998875554 3434455555555556689999987
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHH
Q 016048 165 -----STSAAFQAATAGSIISAVYMRI 186 (396)
Q Consensus 165 -----~~~~~f~~~~~~~~~~~~~~~~ 186 (396)
+|+..+.......+...+..+.
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 6888887777777666655433
No 248
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.51 E-value=1.7e-07 Score=63.58 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
..+-...++...+.+...|.+|.+ .++.+.++.++|.+.++..+...++.+++|.++||++|++..+.....
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~--------~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLY--------LKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHh--------hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 345566777888889999999999 445689999999999999999999999999999999998888776544
Q ss_pred h
Q 016048 88 S 88 (396)
Q Consensus 88 ~ 88 (396)
.
T Consensus 75 ~ 75 (77)
T PF12832_consen 75 M 75 (77)
T ss_pred H
Confidence 3
No 249
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.49 E-value=3.9e-06 Score=72.38 Aligned_cols=311 Identities=15% Similarity=0.123 Sum_probs=181.6
Q ss_pred HHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccch
Q 016048 61 TLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRA 140 (396)
Q Consensus 61 ~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~ 140 (396)
+++.-.+.=.+.|-.-.|++++.-.+.......+.-+.++ .+..-+..++.|. .. ....+.++++-+..+++++.
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~-~t-AaEIAYysYIYs~Vd~~~Yq 129 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGP-AT-AAEIAYYSYIYSKVDPEMYK 129 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcCh-HH-HHHHhhhheeeeecCHHHHH
Confidence 3444445556889999999999988888888888889999 8888889999998 53 44567899999999999999
Q ss_pred hHHHHHHHhhhhhhHHHHHHHHHh---hh---HHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-cccccccchhhhhhhhh
Q 016048 141 SVFGIFSGIVSGAFVCGTISARFI---ST---SAAFQAATAGSIISAVYMRIFLPESVRDED-LYTPILSSKAEISASCE 213 (396)
Q Consensus 141 ~~~~~~~~~~~~g~~~g~~~~~~~---~~---~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~l~~~~~~~~~~~~ 213 (396)
++.+...+..-.|...|..++..+ .| ...=.+... .........+++|..++..- +++..+....+.++...
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~-~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~ 208 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLA-EVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNP 208 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHH-HHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCc
Confidence 999999998888888888888765 22 222222222 22223334467776653210 00000111111111100
Q ss_pred hhhhhhhhhc-cCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhcc-ccccchhhHHHHHHHHHHHH
Q 016048 214 ESTKKLQVFK-RLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFH-FNKNQFADLMVIAGIAGTIS 291 (396)
Q Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 291 (396)
+.+..+..+. ...-++++.... ++|.+....+=..+....++...++.....++.-. -...-.|..=+...+.+.++
T Consensus 209 ~~~~~~~l~~~~~~l~~~l~~~y-~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~ 287 (433)
T KOG3810|consen 209 QASYMSYLRGAFVLLWRDLQECY-SNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIA 287 (433)
T ss_pred cchhhHHHHHHHHHHHHHHHHHh-cCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHH
Confidence 0000000000 000122322223 34544443333344444445555555544444321 11112355555666666666
Q ss_pred HHHHHHhhhhhhcch--hHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHhhhhhhhhhhHHHhhccCCccchhHhhh
Q 016048 292 QLIMMPVLAPTVGEA--RLLSFGLLFGCVHMFLYSVAWSSWVPYAA-AVFSILSVFSHPCLRTIVSKQVASNEQGKAQGC 368 (396)
Q Consensus 292 ~~~~~~~l~~~~g~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 368 (396)
. +..|.+--+..|. .++.++.+..+-..+.+....+.|...+. .++...+....++....+++....|.-|-.+|+
T Consensus 288 ~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGi 366 (433)
T KOG3810|consen 288 A-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGI 366 (433)
T ss_pred H-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeeh
Confidence 6 5556655444433 34556666666666677777777777664 445666777777887888888888888999998
Q ss_pred HHHHHHHHHHh
Q 016048 369 ISGICSFANLV 379 (396)
Q Consensus 369 ~~~~~~~g~~~ 379 (396)
.+++.-+-..+
T Consensus 367 NTFvAl~lQsi 377 (433)
T KOG3810|consen 367 NTFVALILQSI 377 (433)
T ss_pred HHHHHHHHHHh
Confidence 87766554433
No 250
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.47 E-value=7e-07 Score=83.04 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=124.7
Q ss_pred cccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCC------
Q 016048 4 KSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGR------ 77 (396)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr------ 77 (396)
.+.++.+++..+....+.......+|.|+.|. ++.+..+.|+..++..+...+..+++|.++||.-+
T Consensus 257 s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~V-------L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t 329 (466)
T KOG2532|consen 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEV-------LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSET 329 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-------hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchH
Confidence 34577889999999999999999999998874 35555688999999999999999999999998755
Q ss_pred ---chhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhh
Q 016048 78 ---KALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAF 154 (396)
Q Consensus 78 ---k~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 154 (396)
|-.-.++....+++.+..++.++.+....+...-+-.++ .|...+....-..|..| ++-+..+++.+....+..
T Consensus 330 ~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~--~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 330 TVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL--SGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAG 406 (466)
T ss_pred hHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH--cccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHH
Confidence 222333555566666666666643322233333332343 23333334444445454 888999999999999999
Q ss_pred HHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHH
Q 016048 155 VCGTISARFI-------STSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 155 ~~g~~~~~~~-------~~~~~f~~~~~~~~~~~~~~ 184 (396)
.++|.+.+.+ .||+.|++.+++.++..+..
T Consensus 407 ~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 407 FIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 9999998765 69999999999888876544
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.45 E-value=1.1e-06 Score=84.40 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=105.7
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhh
Q 016048 268 AKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSH 346 (396)
Q Consensus 268 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (396)
+.+..+........++..++..+|. ++.|.++||+|||+++..+.++..++-+..++.++.+...+ -++.|++.+...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~-~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGS-LIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHH-hhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 3445666777788888999999999 67789999999999999999999999999999988877666 567788999999
Q ss_pred hhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 347 PCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 347 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
.....+..|.+++++|+.+..+ ......++.++|...+++.+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 88888999999999988876
No 252
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.42 E-value=8.4e-06 Score=77.41 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=89.5
Q ss_pred hhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHH
Q 016048 260 GSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVF 338 (396)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~ 338 (396)
+.++...++ .|-++. ..++.....+...+.. ++.|+++|.+|||...+.+.++..++.++.+...+....+. ..+.
T Consensus 65 ~~l~~I~~d-iG~~~~-~~w~~~~~~l~~av~~-~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 65 SILPYINAD-IGGSDN-WSWFSTAWTLASAVSF-PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHh-cCCCcc-chHHHHHHHHHHHHHH-HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 334444444 466544 4677777888888888 66789999999999999999999999999998888766666 4555
Q ss_pred HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 339 SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
+++.+... .....++|..|.+.|..+.++.....-.....+|.+...+
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 77655444 4455689999999998887766654444444555555444
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.37 E-value=0.00019 Score=67.07 Aligned_cols=282 Identities=13% Similarity=0.124 Sum_probs=161.6
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhH-HHHhhhhcccccccccCCchhhhH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGL-GTLVMMPLVGNLSDKYGRKALLTV 83 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~~~~ 83 (396)
+++..+.+..|+..+.++.....=...+.+. . .+..+.++-....+ ...+...+..+++||++|++++-.
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~----~-----gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~ 94 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILRDLKDTLVVTA----Q-----GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCeEEEec----C-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3455566666666666655443322111111 1 22233444332233 334556679999999999999888
Q ss_pred HHHHhHHHHHHHHhc---------cCch-------------------hHHHHHHHHHHHhhhccchhhH-HHHHHHhcCC
Q 016048 84 PITLSIIPLAILAYS---------RSRN-------------------FFYAYYVLRTLTAMVCEGSIHC-LSLAYVADNV 134 (396)
Q Consensus 84 ~~~~~~~~~~~~~~~---------~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~-~~~~~i~~~~ 134 (396)
....+.....+.++. ++.. ..|.+.+..+..-+ -+....+ .-..+..|.+
T Consensus 95 ~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aEl-wgsvvlSlLFW~fAN~it 173 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAEL-WGSVVLSLLFWGFANEIT 173 (491)
T ss_pred HHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcC
Confidence 777776666666543 1100 12333344444444 2223222 4578899999
Q ss_pred CcccchhHHHHHHHhhhhhhHHHHHHHHHhh-------------hHHHHH-HHHHHHH--HHHHHHHHhcCCCCCCcccc
Q 016048 135 PPGRRASVFGIFSGIVSGAFVCGTISARFIS-------------TSAAFQ-AATAGSI--ISAVYMRIFLPESVRDEDLY 198 (396)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~-------------~~~~f~-~~~~~~~--~~~~~~~~~~~e~~~~~~~~ 198 (396)
+.+|-.|..+++..+.++|.++++.+...+. |...+. +..++.+ +..+.....+.+...++++
T Consensus 174 t~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~- 252 (491)
T PF03219_consen 174 TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPR- 252 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccc-
Confidence 9999999999999999999998877766552 222221 1111111 1112222233222111110
Q ss_pred cccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccc--
Q 016048 199 TPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQ-- 276 (396)
Q Consensus 199 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-- 276 (396)
..+...++++++++.+.+|.++.+.++|.+..+++...+............-..+++.+. ++.+
T Consensus 253 -------------~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ys 318 (491)
T PF03219_consen 253 -------------FYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYS 318 (491)
T ss_pred -------------cchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHH
Confidence 001112233445556788888888899999988888887777766666555555555432 2222
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHH
Q 016048 277 --FADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFG 312 (396)
Q Consensus 277 --~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 312 (396)
.|......++..++.. ++++.+.+|+|-+....+.
T Consensus 319 afmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 319 AFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 3555666777777777 6778889999877665544
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.37 E-value=4.1e-07 Score=62.07 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=67.8
Q ss_pred HhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHh
Q 016048 18 CFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAY 97 (396)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~ 97 (396)
+++...+.|.+|.+ ++|.++|..+.|++.+..++|+++|.+...++.++..+++.+..+.+...+..+.+++
T Consensus 5 GigRFayTplLP~M--------~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 5 GIGRFAYTPLLPLM--------QADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhHHHHHHhHhHHH--------HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 45566788999999 4556788899999999999999999999999999988899999999999999999999
Q ss_pred ccC
Q 016048 98 SRS 100 (396)
Q Consensus 98 ~~~ 100 (396)
.++
T Consensus 77 ~~~ 79 (85)
T PF06779_consen 77 THS 79 (85)
T ss_pred Hhc
Confidence 988
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.32 E-value=8.2e-07 Score=79.52 Aligned_cols=185 Identities=14% Similarity=0.122 Sum_probs=120.2
Q ss_pred HHHHHHHHHhhccccccchhhhhhh-ccCCCCCcchhHHHHHHHHHHHH-hHHHHhhhhcccccccccCCchhhhHHHHH
Q 016048 10 LFITIFVHCFSTSMVAPAITDVTMS-AVCPGRDECSLAIYLSGFQQAII-GLGTLVMMPLVGNLSDKYGRKALLTVPITL 87 (396)
Q Consensus 10 l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~-~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~ 87 (396)
.+...|+..++..-..-....++.+ ...+.+++.+ ..........+- ..+++.+-.+...+.|+.|||++.+.+.++
T Consensus 309 t~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~-~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~ 387 (538)
T KOG0252|consen 309 TAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYH-ELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFI 387 (538)
T ss_pred HHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHH-HHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHH
Confidence 4455566656665555555555553 1222333321 111222222222 334455778889999999999999999999
Q ss_pred hHHHHHHHHhccC-chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh--
Q 016048 88 SIIPLAILAYSRS-RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI-- 164 (396)
Q Consensus 88 ~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~-- 164 (396)
+.+..+..+...+ ......+++...+..+++.-+-......+-+|.+|.+-|+..-|+..+..-.|.++|...-..+
T Consensus 388 ~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 388 MTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTD 467 (538)
T ss_pred HHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhh
Confidence 9999998888766 2222333444444444333333445667789999999999999999988888888886554433
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 016048 165 -------STSAAFQAATAGSIISAVYMRIFLPESVRDED 196 (396)
Q Consensus 165 -------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~ 196 (396)
+.++.+++.+....+..+.. +++||+..+..
T Consensus 468 ~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~l 505 (538)
T KOG0252|consen 468 HNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKSL 505 (538)
T ss_pred ccCCccccchHHHHHHHHHHHHhHhee-EEeecccccCH
Confidence 56889999988887766554 77888876543
No 256
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.24 E-value=0.00026 Score=65.71 Aligned_cols=104 Identities=9% Similarity=0.063 Sum_probs=65.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhcch-hHHHHHHHHHHHHHHHHHHh------------hh-hhHHHHHHHHHHhhh
Q 016048 278 ADLMVIAGIAGTISQLIMMPVLAPTVGEA-RLLSFGLLFGCVHMFLYSVA------------WS-SWVPYAAAVFSILSV 343 (396)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~i~~~~~~~~------------~~-~~~~~~~~~~~~~~~ 343 (396)
-.....++++..+|+ .+..+. ..-++| +.+.+..+.-.+..-++... .+ .+..+..+++++..|
T Consensus 310 ~i~~~~fNvgD~vGR-~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 310 IICFLLFNLFDWLGR-SLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHh-hhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 456677888888988 443222 111222 13333333332222222111 12 223344677788899
Q ss_pred hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhh
Q 016048 344 FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLA 383 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 383 (396)
......+.+..+.+++++|..+-.+....-.+|-.+|..+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9889999999999999999888888888888888777665
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.21 E-value=1.3e-05 Score=62.44 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=85.7
Q ss_pred HHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCC
Q 016048 55 AIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNV 134 (396)
Q Consensus 55 s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 134 (396)
++.+....+.+++.+.+.+++|.|+.++++.+...+-.... +-++ .+.++.+-.+.|+ +.+..++..-.++.+..
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~---~~~l~~~s~l~G~-~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPN---SYTLYPASALLGF-GAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhhh---HHHHHHHHHHHhh-hhHHhhHhhhHHHHHcC
Confidence 34455566667778889999999999999999887555443 4556 7888999999999 99999999999999999
Q ss_pred CcccchhHHHHHHHhhhhhhHHHHHHHHH
Q 016048 135 PPGRRASVFGIFSGIVSGAFVCGTISARF 163 (396)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 163 (396)
++++|++..+++-.....+.++|.++...
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888765543
No 258
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.18 E-value=1.1e-05 Score=68.40 Aligned_cols=361 Identities=16% Similarity=0.118 Sum_probs=179.0
Q ss_pred hHHHHHHHHHHhhccccccchhhhhhhccCC---------CCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCc
Q 016048 8 SHLFITIFVHCFSTSMVAPAITDVTMSAVCP---------GRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRK 78 (396)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk 78 (396)
...++.-.+.++++-+...+--+++.++.+. ...+++.- -.|.+.-.-.+..++-.+....+.||+---
T Consensus 15 ~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~--stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 15 VAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSV--STGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred hHHHHHHHhcccceEeehhhhhhhhccccCCCCCCccccccccccccc--ccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 3344555555566555555555555554330 12233322 235555556677777778888889987654
Q ss_pred hhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHH
Q 016048 79 ALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGT 158 (396)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 158 (396)
.=..+..++.+.+..+.+++++ .++-+.+-.+..+ +.|.-...-.++ +..+|+. ..+-++.+.+.+.++|.
T Consensus 93 ~Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSi-ssGlGEiTFL~l-ss~Y~~~----~i~~WSSGTGgAGliGa 163 (409)
T KOG3880|consen 93 FRIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASI-SSGLGEITFLAL-SSRYPSI----VIAGWSSGTGGAGLIGA 163 (409)
T ss_pred hHHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhh-cCCcceeehhhh-hccCCCc----eeccccCCCCcchhhhh
Confidence 4445566778888999999999 8888888888888 666554333333 3333322 23334444555555554
Q ss_pred HHHHHh------hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhh--hhhhhhhhhhhhccCCChhH
Q 016048 159 ISARFI------STSAAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISA--SCEESTKKLQVFKRLPSIDD 230 (396)
Q Consensus 159 ~~~~~~------~~~~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 230 (396)
.--..+ +.|...++...+.++.+...++.+++++.... ..+++..+.... ...+..+++.........++
T Consensus 164 ~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~--ptl~~~~~~~~~~~~~~~a~e~~sv~s~~~~~~e 241 (409)
T KOG3880|consen 164 SSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS--PTLQPSTEIIPSQYLPFEAAEEKSVPSRRLGLKE 241 (409)
T ss_pred hHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC--CCcCccceeccCCCCcccccccccCchhhhcHHH
Confidence 332222 44777777777777766666666665443221 111110000000 00000011101111223333
Q ss_pred HhhhhcCChhHHHHHHHHHHHHHhhhhhhhhHHHHh-hh-hccccc---cchhhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 016048 231 MVHLLKSSPTFSQAAIVAFLSNLADAGLQGSMMYYL-KA-KFHFNK---NQFADLMVIAGIAGTISQLIMMPVLAPTVGE 305 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 305 (396)
.++.+ +.+...++=.....+..+.++.-+...+ -+ ..|++. .|+-++...+.++..+.+ =+-|+=+
T Consensus 242 ~~~~i---~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSR------SS~~~~~ 312 (409)
T KOG3880|consen 242 TLKRI---KPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISR------SSINLFT 312 (409)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEe------ccceEEe
Confidence 33222 1222222223333333333333222211 10 113322 234455555554433333 1112222
Q ss_pred hhHHHHHHHHHHHHHH------HHHHhhhhhHHHHHHHH-HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHH
Q 016048 306 ARLLSFGLLFGCVHMF------LYSVAWSSWVPYAAAVF-SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANL 378 (396)
Q Consensus 306 ~~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 378 (396)
-+.+..-.++..+-+. .+.+.++.+...+.+++ |...|..+.-.+--+.+-.++++|--+++.......+|-.
T Consensus 313 ~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~ 392 (409)
T KOG3880|consen 313 MPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIF 392 (409)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHH
Confidence 2222222223222222 22334445544444444 5555566666666677778889999999999988888888
Q ss_pred hhhhhhhhhhhc
Q 016048 379 VSPLAFSPLTGD 390 (396)
Q Consensus 379 ~~~~~~g~l~~~ 390 (396)
++..+.=++-++
T Consensus 393 lA~~lalplh~~ 404 (409)
T KOG3880|consen 393 LAGLLALPLHNW 404 (409)
T ss_pred HHHHHhccchhh
Confidence 887776555443
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.13 E-value=1.9e-05 Score=53.55 Aligned_cols=70 Identities=21% Similarity=0.235 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLF 315 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 315 (396)
+-...++..........++|.|+++. |+|+.+.|.+.++..+..+++. ++.|.++||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~-Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQL-GLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 34456667777788889999999975 9999999999999999999999 7778999999988876655443
No 260
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.11 E-value=0.0066 Score=55.71 Aligned_cols=256 Identities=11% Similarity=0.090 Sum_probs=150.4
Q ss_pred HHHHHHHHHhH-HHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc---------C-----------c----h-
Q 016048 49 LSGFQQAIIGL-GTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR---------S-----------R----N- 102 (396)
Q Consensus 49 ~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~---------~-----------~----~- 102 (396)
...++-+..-+ +.++..++.+++.+++.|.+++-.-...+....+++++.- + + +
T Consensus 62 ~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ 141 (509)
T COG3202 62 SISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWF 141 (509)
T ss_pred hhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceee
Confidence 44555555555 5677888999999999999999988888777777776531 1 0 0
Q ss_pred ----hHHHHHHHHHHHhhhccchhhH-HHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHhh-hH---------
Q 016048 103 ----FFYAYYVLRTLTAMVCEGSIHC-LSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFIS-TS--------- 167 (396)
Q Consensus 103 ----~~~~l~~~r~l~G~~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~-~~--------- 167 (396)
+.|...+.....-+ -.+.... .-.....|.++.+|-.|..++++...+++..+++.+..+++ ++
T Consensus 142 ili~~~Ws~s~~Yi~aEL-WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~ 220 (509)
T COG3202 142 ILIVGEWSYSLFYIMAEL-WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKD 220 (509)
T ss_pred eEeecchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHH
Confidence 01343344444444 2222222 45577889999999999999999999999998888777662 22
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCCCCCcccccccccchhhhhhhhhhhhhhhhhhccCCChhHHhhhhcCChhHHH
Q 016048 168 ----AAFQAATAGSIISAVYMRIFLPESVRDEDLYTPILSSKAEISASCEESTKKLQVFKRLPSIDDMVHLLKSSPTFSQ 243 (396)
Q Consensus 168 ----~~f~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (396)
..+.+.....+++..+. .++.+...+++. -......+++.++.+.+..+.++.+.++|.+..
T Consensus 221 ~~~~~~~~vi~~~~~i~~~l~-~~~~r~il~~~~-------------f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ 286 (509)
T COG3202 221 LLLQILFIVIVILGIIAILLY-RYINRNVLTDPL-------------FYLRAKKKKKKKKLKLGLIESFKMILRSKYLGA 286 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCcc-------------hhHHHhcccccccccCcHHHHHHHHHhhhHHHH
Confidence 22333333333333322 222211111110 000011122233444567788888888898888
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccc---cchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNK---NQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
+.+...+.+.+...+....-.-.++.+--+. +-.+.+....++...+.....++.+.+|.|-.....+.-++..++
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8888777777665555443333333222211 123445566677755666577788888888766555554444444
No 261
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.06 E-value=0.00012 Score=68.65 Aligned_cols=121 Identities=17% Similarity=0.093 Sum_probs=97.9
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhh
Q 016048 268 AKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSH 346 (396)
Q Consensus 268 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (396)
+..++...+.+...+.+.++-+++. +..+.+.||++..+.+....++..+..++-....+.+..++ -++.|+..+..+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~-~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQ-FPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHH-hhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 4457778889999999999999999 67789999999666555555554444434444455555544 677799999999
Q ss_pred hhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 347 PCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 347 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
|....++..-+.+++||.-+|+.+....+|+++|+++...+++
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999988665
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.04 E-value=0.00053 Score=53.56 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccC
Q 016048 279 DLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVA 358 (396)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 358 (396)
.-+++......+.. ++.|.+.+++|.|+.+.++.+...+-.................+.|++.+..+...-.++.+..+
T Consensus 41 ~slai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34455566666777 66788999999999999999988876666554444444444778899999999999999999999
Q ss_pred CccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 359 SNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 359 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
++.+++..++.-.+.+.+.++|..+.-.+.+.
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~ 151 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQG 151 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998888888777666544
No 263
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.97 E-value=0.0001 Score=67.91 Aligned_cols=148 Identities=16% Similarity=0.158 Sum_probs=102.8
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhHHHHhhh-hccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcc-hhHHHHHHHHH
Q 016048 239 PTFSQAAIVAFLSNLADAGLQGSMMYYLKA-KFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGE-ARLLSFGLLFG 316 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~ 316 (396)
|.++...+..++....+.......-.|+++ ..+-+.+..|++.+...++..++. +..+++..|.+. |+.++.+.+++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~-liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFS-LIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcc-hhhcccccccCCcccCHHHHHHHH
Confidence 445556666666666555554445556665 136677778999999999999999 555788888775 77788888999
Q ss_pred HHHHHHHHHhh-hhh-HHHHHHHH--HHhhh-hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 317 CVHMFLYSVAW-SSW-VPYAAAVF--SILSV-FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 317 ~i~~~~~~~~~-~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
.++.++..... .+. ..+.+++. ..|.+ .......+++++...+++|.++++..+....+|.++||.+...+
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 89988874322 111 22222222 22333 34567889999988889999999999988888888888776544
No 264
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.95 E-value=0.0002 Score=60.70 Aligned_cols=125 Identities=18% Similarity=0.275 Sum_probs=89.8
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh-------hhHHHHH
Q 016048 263 MYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS-------SWVPYAA 335 (396)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~ 335 (396)
...+++++|+|.++...+-....++..++ +..|.+.||+|++.++.++.+...++...+..... .|.....
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~ 102 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLF 102 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHH
Confidence 34466788999999998888888888775 45689999999999999999999999888876432 1222221
Q ss_pred HHH-HHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 336 AVF-SILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 336 ~~~-~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
..+ +.+....+........+.+| ++||++.|+.-....+++.+-..+...+++.
T Consensus 103 ~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 103 LFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 111 22223334555566668898 6899999999999888888776666555543
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.94 E-value=0.00029 Score=64.48 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=79.2
Q ss_pred hhhhHHHHHhHHHHHHHHhccCch------hHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcc---cchhHHHHHHHh
Q 016048 79 ALLTVPITLSIIPLAILAYSRSRN------FFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPG---RRASVFGIFSGI 149 (396)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~ 149 (396)
|.+.++.++..+|.++..++.... ..+.++++-.+.++ |.|+.-|...++.+|-++++ +|.+.+.++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~-G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAV-GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHH-HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHh-ccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 567788888888888854432211 13678888889999 99999999999999999876 356677788899
Q ss_pred hhhhhHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHH
Q 016048 150 VSGAFVCGTISARFI----STSAAFQAATAGSIISAVYM 184 (396)
Q Consensus 150 ~~~g~~~g~~~~~~~----~~~~~f~~~~~~~~~~~~~~ 184 (396)
.++|..+++.+..++ +|.+.|.+.++..++..+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 999999988776665 78999998888777665543
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.91 E-value=0.00013 Score=70.97 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=106.2
Q ss_pred hhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh-hcchhHHHHHHHHHHHHHHHHHHhhhh---
Q 016048 254 ADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT-VGEARLLSFGLLFGCVHMFLYSVAWSS--- 329 (396)
Q Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~~--- 329 (396)
+++++...+..|+.+.+|++...+..+........-+.. +++++++|+ +|+++.+..+.++..++..++......
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 467778888899888889998887777777666666666 677899996 699999999999999998887764211
Q ss_pred -----h-HHHHHHHHHHhhhhhhhhhhHHHhhccCCc---cchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 330 -----W-VPYAAAVFSILSVFSHPCLRTIVSKQVASN---EQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 330 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
. ....+.+..+|.+++-|...+...|.++++ ++-+.+.+.....++|+.+++.+.+++-+.
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~ 150 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGD 150 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 122245557778888899999999988754 367788888899999999999999888744
No 267
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.90 E-value=3.5e-07 Score=86.08 Aligned_cols=109 Identities=13% Similarity=0.049 Sum_probs=93.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh---hhhHHHH-HHHHHHhhhhhhhhhhH
Q 016048 276 QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW---SSWVPYA-AAVFSILSVFSHPCLRT 351 (396)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~ 351 (396)
+.+...+...++..+|. ++.|.+.||+|||+.+..+..+..++.++..+.+ +.+.... -++.|++.+...+....
T Consensus 47 ~~~~~~~~~~~g~~~G~-~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGA-LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHhhhcccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 35778888999999999 7778999999999999999999999999998888 5555544 46678899999999999
Q ss_pred HHhhccCCccchhHhhhHHHHHHHHHHhhhhhhh
Q 016048 352 IVSKQVASNEQGKAQGCISGICSFANLVSPLAFS 385 (396)
Q Consensus 352 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 385 (396)
++.|..|+++|+...++.+....+|..++..+.-
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999888888777766543
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.89 E-value=0.0016 Score=58.50 Aligned_cols=125 Identities=11% Similarity=0.089 Sum_probs=70.0
Q ss_pred hhhhhhhHHHHhhhhcccc--ccc-hhhHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH------
Q 016048 255 DAGLQGSMMYYLKAKFHFN--KNQ-FADLMVI-AGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS------ 324 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~--~~~-~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~------ 324 (396)
+....+.+|-+..+..+-. +.. .-..... +++...+|. ..+.++.++ +||.+ .+....-.+..-++.
T Consensus 259 y~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~-~~a~~~~~~-~~r~l-~i~v~lR~lfiPlF~~cn~~~ 335 (406)
T KOG1479|consen 259 YFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGS-ILAALLTWP-DPRKL-TIPVLLRLLFIPLFLLCNYPP 335 (406)
T ss_pred eeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhh-hhhhcccCC-CCcee-hHHHHHHHHHHHHHHHhccCC
Confidence 3344456677766543221 122 2333344 677788886 444443332 33333 333333222222222
Q ss_pred ----HhhhhhHHHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhh
Q 016048 325 ----VAWSSWVPYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPL 382 (396)
Q Consensus 325 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~ 382 (396)
+.+..+......++++..|......+.+..+.+|++++..+-.+....-..|-..|..
T Consensus 336 ~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 336 LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 2223445555778889999999999999999999888776666665555555555433
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.75 E-value=0.0017 Score=57.33 Aligned_cols=122 Identities=11% Similarity=0.010 Sum_probs=81.5
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHhhhhhh
Q 016048 268 AKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPYA-AAVFSILSVFSH 346 (396)
Q Consensus 268 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (396)
+.+|++..+++.++........+.. .+.|.+.||+|||+.-+..+++..++++..-. ++...+++ =++-|+.....+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHH
Confidence 4579999999999988888888888 66689999999999998888888888865444 34444444 355567777777
Q ss_pred hhhhHH-Hhhc----cCCccchhHhhhHH-HHHHHHHHhhhhhhhhhhhcc
Q 016048 347 PCLRTI-VSKQ----VASNEQGKAQGCIS-GICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 347 ~~~~~~-~~~~----~p~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~ 391 (396)
...-++ +.|. +|++..+...+... ..+.+-.+.+..++..+.|+.
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~ 190 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF 190 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh
Confidence 666555 3443 45444555555444 223344455555555555543
No 270
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.73 E-value=0.00041 Score=64.57 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=101.5
Q ss_pred cchhHHHHHHHHHHHHhHHHHhhhhccc-ccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccc
Q 016048 42 ECSLAIYLSGFQQAIIGLGTLVMMPLVG-NLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEG 120 (396)
Q Consensus 42 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G-~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 120 (396)
.++.+..+.+...+.......+++.+.. .+...+|-|+.+..++..-.+...+.+++++ .|+.+....+.++ ..
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~---~w~~~~~~v~~~~--~~ 345 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE---TWMMFAAGVVVAL--AG 345 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc---chhhhHHHHHHHh--hc
Confidence 5566667788777777777777777766 7788889999999999999999999999999 8888888888886 46
Q ss_pred hhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 121 SIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 121 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
...|...+.++.+.+++++|+++++......+..+++|.+-+.+
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 77899999999999999999999999999999999998876654
No 271
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0093 Score=57.27 Aligned_cols=135 Identities=19% Similarity=0.165 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhHHHHhhhhccccccccc-CCchhhhHHHHHhHHHHHHHHhccC----------------------chhH
Q 016048 48 YLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALLTVPITLSIIPLAILAYSRS----------------------RNFF 104 (396)
Q Consensus 48 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 104 (396)
....-..+.+.-......+.++.++|-| ||-+.+.++.++..++..+...+.. ....
T Consensus 73 ~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~ 152 (571)
T KOG1237|consen 73 GGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQL 152 (571)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHH
Confidence 3444455555555666778899999976 9999999998888888544433211 1123
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHHHhcCCCc---cc-c--hhHHHHHHHhhhhhhHHHHHHHHHh----hhHHHHHHHH
Q 016048 105 YAYYVLRTLTAMVCEGSIHCLSLAYVADNVPP---GR-R--ASVFGIFSGIVSGAFVCGTISARFI----STSAAFQAAT 174 (396)
Q Consensus 105 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~---~~-r--~~~~~~~~~~~~~g~~~g~~~~~~~----~~~~~f~~~~ 174 (396)
..++.+.-+..+ |.|+..|...++-+|-+++ ++ + ...+.++....+.|..++-.+-.+. +|.+.|.+..
T Consensus 153 ~~~~~~l~lia~-G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~ 231 (571)
T KOG1237|consen 153 AVLYGALYLIAL-GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPT 231 (571)
T ss_pred HHHHHHHHHhee-ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHH
Confidence 466777777787 8899999999999999882 22 2 2456677777788877776555443 8888888887
Q ss_pred HHHHHHHHH
Q 016048 175 AGSIISAVY 183 (396)
Q Consensus 175 ~~~~~~~~~ 183 (396)
+...+..++
T Consensus 232 ~~~~lai~i 240 (571)
T KOG1237|consen 232 VLNALAILI 240 (571)
T ss_pred HHHHHHHHH
Confidence 776665443
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.00061 Score=61.54 Aligned_cols=128 Identities=9% Similarity=0.002 Sum_probs=88.6
Q ss_pred HHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhh---hHHH-HHHH
Q 016048 262 MMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSS---WVPY-AAAV 337 (396)
Q Consensus 262 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~-~~~~ 337 (396)
...|..+-|| +.+.+-+...++.+..+... +.+-|+.||+|-|....++....+++..+=.....+ .... -...
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g-f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFG-FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH 144 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHh-hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence 4445666667 56666788888888888888 666799999999999999999999987766554332 1111 1111
Q ss_pred HH-Hhhhhhhhhhh----HHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhcc
Q 016048 338 FS-ILSVFSHPCLR----TIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 338 ~~-~~~~~~~~~~~----~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 391 (396)
.| ...+..++-.. -+..--+|+++|+++..+..+.+.+|..++-++-..+..+.
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 11 11222333222 23334479999999999999999999999988877777655
No 273
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.44 E-value=0.0061 Score=53.52 Aligned_cols=130 Identities=16% Similarity=0.155 Sum_probs=90.4
Q ss_pred hhhHHHHhhhhccccc--cchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh--hhHHHH
Q 016048 259 QGSMMYYLKAKFHFNK--NQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS--SWVPYA 334 (396)
Q Consensus 259 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~ 334 (396)
....+.+..+. +.+. ...+.......+...++. +..|.+.||.|||+....+.....++.+....... .+....
T Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (338)
T COG0477 22 SPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLI 99 (338)
T ss_pred HHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 33445554443 3333 356788888888888888 77789999999997777777654444444444443 222222
Q ss_pred -HHHHHHhhhhhhhhhhHHHhhccCC-ccchhHhhhHHH-HHHHHHHhhhhhhhhhhhc
Q 016048 335 -AAVFSILSVFSHPCLRTIVSKQVAS-NEQGKAQGCISG-ICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 335 -~~~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~ 390 (396)
....+.+.+...+...++..|..|+ ++|+...+.... ....+..++|.+.+.+.+.
T Consensus 100 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 100 LRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334667777889999999999997 678999998888 5778888888777766654
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.18 E-value=0.0035 Score=42.95 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=61.0
Q ss_pred hhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhH
Q 016048 256 AGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWV 331 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 331 (396)
+.+...+|...+| .++|.++.+++-+.+.++..+|. +...++.++.++++.+..+.+...+..+.+++..+.+.
T Consensus 9 FayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 9 FAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred HHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 4445566776655 49999999999999999999999 66678888878888999999999999999988776553
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.16 E-value=0.043 Score=46.27 Aligned_cols=51 Identities=6% Similarity=-0.106 Sum_probs=32.0
Q ss_pred ccchhHHHHHHHhhhhhhHHH--HHHHH-----Hh--hhHHHHHHHHHHHHHHHHHHHHh
Q 016048 137 GRRASVFGIFSGIVSGAFVCG--TISAR-----FI--STSAAFQAATAGSIISAVYMRIF 187 (396)
Q Consensus 137 ~~r~~~~~~~~~~~~~g~~~g--~~~~~-----~~--~~~~~f~~~~~~~~~~~~~~~~~ 187 (396)
|+|+........+.++|.++. |.+-. .+ .|++.+.+.+++..+-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566666666677777777664 33222 11 68888888887776665554343
No 276
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.16 E-value=0.0062 Score=56.86 Aligned_cols=132 Identities=17% Similarity=0.247 Sum_probs=94.4
Q ss_pred hhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-----cchhHHHHHHHHHHHHHHHHHHhhh----hh
Q 016048 260 GSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-----GEARLLSFGLLFGCVHMFLYSVAWS----SW 330 (396)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~~~~~~~~~~~i~~~~~~~~~~----~~ 330 (396)
.-..+|+++.+|+++.+...+.....+--.+-. +.|.++|-+ +||+.+.++.++..++...+...+. ..
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp--~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKP--LYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhh--hHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 345667888899999998888777776666654 447899976 3566677777777666665555433 22
Q ss_pred HH-HHHHHHHHhhhhhhhhhhHHHhhccC--CccchhHhhhHHHHHHHHHHhhhhhhhhhhhcccC
Q 016048 331 VP-YAAAVFSILSVFSHPCLRTIVSKQVA--SNEQGKAQGCISGICSFANLVSPLAFSPLTGDCRF 393 (396)
Q Consensus 331 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 393 (396)
.. ...++..++.........+...|... ++.+|..++.......+|+.++..+.|++.+....
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~ 153 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP 153 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence 22 22344466777777888888888762 23488999999999999999999999999887643
No 277
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.04 E-value=0.013 Score=54.29 Aligned_cols=151 Identities=20% Similarity=0.197 Sum_probs=96.3
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccc---cccCCchhhh
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLS---DKYGRKALLT 82 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~---Dr~Grk~~~~ 82 (396)
+...+....+..++.........|....-.. ..-..+....++..-...++..++..+.+.+. +|+||++.+.
T Consensus 241 ~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~----~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 241 KMLLLFPFFFYTGLETSFWISIYPTCISFTR----KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhhhhhh----hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 3444444445554554444444444322210 11111223344444445566666666677776 4689999999
Q ss_pred HHHHHhHHHHHHHHhccCc---------------hhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHH
Q 016048 83 VPITLSIIPLAILAYSRSR---------------NFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFS 147 (396)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 147 (396)
++..+..+..++.-.+... +.+....+.-++.|+ +.+......+.++.+.. +++|..+.++..
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k 394 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLFK 394 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHHH
Confidence 9988888888777654221 125567788899999 99999999999999999 588888888888
Q ss_pred HhhhhhhHHHHHHHH
Q 016048 148 GIVSGAFVCGTISAR 162 (396)
Q Consensus 148 ~~~~~g~~~g~~~~~ 162 (396)
.-.+++..++-....
T Consensus 395 fyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 395 FYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHhhhhh
Confidence 777777766544443
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.01 E-value=0.024 Score=51.58 Aligned_cols=136 Identities=12% Similarity=0.020 Sum_probs=100.8
Q ss_pred hhhhhhhHHHHhhhh-ccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 016048 255 DAGLQGSMMYYLKAK-FHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSWVPY 333 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 333 (396)
+--...++..|+.+. .|++.++...-.-+...-.-+..++....+.|.++.|++++.+.+...+...++.+..+.....
T Consensus 19 frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq 98 (412)
T PF01770_consen 19 FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQ 98 (412)
T ss_pred cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHH
Confidence 355677888888886 7999888665544444444444445667899999999999999999988888888887766655
Q ss_pred HHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhhc
Q 016048 334 AAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTGD 390 (396)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 390 (396)
+.-++-........+.++++-..+|+++--++.+......-+|..++..++-.+...
T Consensus 99 ~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 99 LMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544433333344667788888888999888899988888888888887777666553
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.01 E-value=0.00094 Score=60.41 Aligned_cols=144 Identities=13% Similarity=0.075 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh----hcch-hHHHHHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT----VGEA-RLLSFGLL 314 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~-~~~~~~~~ 314 (396)
.+.....+.+...+....-.+++++|+++. |.+....+......-+.+.+.+ ++.|..+|| +||| +.+..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQ-P~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQ-PLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceec-ccccccccccccccccccchHHHhhH
Confidence 334444445555555666678889998875 9999988899888999999999 666899996 5655 45666677
Q ss_pred HHHHHHHHHHHhhhhh-------------HHHHHHHH-----HHhhhhhhhhhhHHHhhccCCccchh-HhhhHHHHHHH
Q 016048 315 FGCVHMFLYSVAWSSW-------------VPYAAAVF-----SILSVFSHPCLRTIVSKQVASNEQGK-AQGCISGICSF 375 (396)
Q Consensus 315 ~~~i~~~~~~~~~~~~-------------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~g~-~~g~~~~~~~~ 375 (396)
...++++++++..... ..+...++ =+....++....++..|+..++++-+ +++....+..+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 7778888877754311 11222222 23345677889999999998887777 99999999999
Q ss_pred HHHhhhhhhh
Q 016048 376 ANLVSPLAFS 385 (396)
Q Consensus 376 g~~~~~~~~g 385 (396)
|+.+|-.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 9988755544
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.40 E-value=0.00054 Score=65.40 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=1.9
Q ss_pred hhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh------
Q 016048 255 DAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS------ 328 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~------ 328 (396)
..++....-.-++++|+++..+.|.+.+.+-++..+..+++ .++.+|..|-+.+..+.++++++.+++.+..-
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~v-sy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~ 96 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFV-SYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYS 96 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCc
Confidence 33333333445678899999999999999999999999444 58888888888899999999999887764210
Q ss_pred ----------------------------------------hhHHHH-----HHHHHHhhhhhhhhhhHHHhhccCCccch
Q 016048 329 ----------------------------------------SWVPYA-----AAVFSILSVFSHPCLRTIVSKQVASNEQG 363 (396)
Q Consensus 329 ----------------------------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 363 (396)
....+. -++.|++....++...+++-|.+++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~sp 176 (539)
T PF03137_consen 97 YEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSP 176 (539)
T ss_dssp -------------------------------------------------------SSS----------------------
T ss_pred cccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCc
Confidence 000011 23346666778899999999999999999
Q ss_pred hHhhhHHHHHHHHHHhhhhhhhhhhhccc
Q 016048 364 KAQGCISGICSFANLVSPLAFSPLTGDCR 392 (396)
Q Consensus 364 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 392 (396)
...|+...+..+|-.+|-.+++.+.+.+.
T Consensus 177 lYiGi~~~~~~lGPa~Gf~lg~~~L~~yv 205 (539)
T PF03137_consen 177 LYIGILYAMSILGPALGFLLGSFCLRIYV 205 (539)
T ss_dssp -----------------------------
T ss_pred cchhhhhHHhhccHHHHHHHHHHHHhcee
Confidence 99999999999999999888888877653
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.38 E-value=0.001 Score=59.12 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=3.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHHHHHHHHHHH--HHHHH-H----------hhh-hhHHHHHHHHHHhhh
Q 016048 279 DLMVIAGIAGTISQLIMMPVLAPTV-GEARLLSFGLLFGCVH--MFLYS-V----------AWS-SWVPYAAAVFSILSV 343 (396)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~i~--~~~~~-~----------~~~-~~~~~~~~~~~~~~~ 343 (396)
..+..++++..+|+ .+..+..-+. ++|++ ....+.-.+. ++++. . ..+ .+..+..+++++..|
T Consensus 186 ~~fl~Fn~gD~iGR-~l~~~~~~~~~~~~~l-~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGR-FLASWPRWPGPSPRWL-WILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcc-hhcceeEecccccccH-HHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc
Confidence 34667899999999 5544422111 23333 3322222221 11111 1 112 223334667788889
Q ss_pred hhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhh
Q 016048 344 FSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAF 384 (396)
Q Consensus 344 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 384 (396)
......+.+..+.+++++|..+-.+....-..|-.+|..+.
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---HHHH----------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888887777777777766543
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.29 E-value=0.051 Score=49.49 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHH-----HHHHHhccCchhHHHHHHHHHHHhhhccch
Q 016048 47 IYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIP-----LAILAYSRSRNFFYAYYVLRTLTAMVCEGS 121 (396)
Q Consensus 47 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 121 (396)
..+..+...+|.+|..++.--...+ |+ |+..+.+.+-..-. ....-+.++ .|..++.-+..|+ .+|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGL-lGGa 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGL-LGGA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHH-hhhH
Confidence 3466777778888877765433222 33 44444443332221 222334566 8888899999999 7788
Q ss_pred hhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 122 IHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 122 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
.+.-....+.|-.|+++|...++....+-+.|.+++.+++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999998887654
No 283
>PRK03612 spermidine synthase; Provisional
Probab=96.26 E-value=0.12 Score=49.44 Aligned_cols=119 Identities=13% Similarity=-0.003 Sum_probs=68.5
Q ss_pred chhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhH---HHHHHHHhccC--chhHHHHHHHHHHHhhh
Q 016048 43 CSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSI---IPLAILAYSRS--RNFFYAYYVLRTLTAMV 117 (396)
Q Consensus 43 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~l~~~r~l~G~~ 117 (396)
++.+....+.+.+++.+|..+|+.+.+++.++.-|+.. .+-..+.. ++..+...... .......+..-++.++
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~- 122 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL- 122 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 45566778999999999999999998888744332222 11111111 11111111111 0001222334455666
Q ss_pred ccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 118 CEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 118 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
..|...|....+..+... ++-++..|.......+|.++|+++.+++
T Consensus 123 l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 123 LIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 667777877776665332 3345667778888888888888777654
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.18 E-value=0.22 Score=46.70 Aligned_cols=124 Identities=8% Similarity=0.005 Sum_probs=79.7
Q ss_pred hhhhcccc-----ccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh----h--------
Q 016048 266 LKAKFHFN-----KNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW----S-------- 328 (396)
Q Consensus 266 ~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~----~-------- 328 (396)
++|....+ .+...++....-+...+.-.++.+++++|++|+++.-.........+.++++.- +
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~ 108 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALA 108 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHH
Confidence 35555552 245556655554544444225567999999999987766666555555544330 0
Q ss_pred -------------------hhHHHHHHHH-HHhhhhhhh-hhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 329 -------------------SWVPYAAAVF-SILSVFSHP-CLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 329 -------------------~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
.|......+. ........+ ..+++++|.+++++..+-.++....+++|..+++.+..++
T Consensus 109 ~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 109 DKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011111 222233334 7889999999999999999999999999999999998887
Q ss_pred hh
Q 016048 388 TG 389 (396)
Q Consensus 388 ~~ 389 (396)
.+
T Consensus 189 ~~ 190 (472)
T TIGR00769 189 SK 190 (472)
T ss_pred HH
Confidence 64
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.73 E-value=0.13 Score=47.75 Aligned_cols=130 Identities=13% Similarity=0.036 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH---hccCc----hhHHHHHHHHHHHhh
Q 016048 44 SLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA---YSRSR----NFFYAYYVLRTLTAM 116 (396)
Q Consensus 44 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~l~~~r~l~G~ 116 (396)
+.+..+.|..-+...+..+.+.....++.+|+|..|.=+++...-.++..++. +.++. .+...++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999998887777665444433332 22321 123444444444433
Q ss_pred hccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHhhhHHHHHHHH
Q 016048 117 VCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFISTSAAFQAAT 174 (396)
Q Consensus 117 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~f~~~~ 174 (396)
|-=++.....-++.|..|+++||...|.-....++-.++-..++-.++...-|....
T Consensus 369 -GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv 425 (432)
T PF06963_consen 369 -GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLV 425 (432)
T ss_pred -HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHH
Confidence 333445577888999999999999999999888888887777666655444444333
No 286
>PRK03612 spermidine synthase; Provisional
Probab=95.51 E-value=0.77 Score=44.02 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=76.2
Q ss_pred HHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHH---HHHHH
Q 016048 246 IVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGC---VHMFL 322 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~---i~~~~ 322 (396)
+..++..++.........-.+...+|-+....+.+.+.+..+..+|. .+++++.++..++ ....-..+.. ++..+
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRDAAAG-FVAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHH
Confidence 33344444444445555555555568787777788887777777777 5555554332222 1111111111 11111
Q ss_pred HHHhhhh----hH--HHHHHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 323 YSVAWSS----WV--PYAAAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 323 ~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
+...... .. ....++.++..|...|....+..+... ++.|+..|-....+.+|+++|+++.++++-
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 1111111 01 111333456667777776666554322 345677888889999999999999987764
No 287
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.21 E-value=0.044 Score=53.46 Aligned_cols=137 Identities=10% Similarity=0.097 Sum_probs=107.9
Q ss_pred hhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhh---------
Q 016048 257 GLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAW--------- 327 (396)
Q Consensus 257 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~--------- 327 (396)
++....-.-++++++++.++.|++...+-++..+... ...+...|..|-+++..+.++++++.++..+..
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~-fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLII-FVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhH-hHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhh
Confidence 4444444456788999999999999999999999884 446888888888999999999999988776421
Q ss_pred ----------h--------------------------------hhHHHH--HHHHHHhhhhhhhhhhHHHhhccCCccch
Q 016048 328 ----------S--------------------------------SWVPYA--AAVFSILSVFSHPCLRTIVSKQVASNEQG 363 (396)
Q Consensus 328 ----------~--------------------------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 363 (396)
. ++..+. -++.|+|....++...+++-|.+.+++..
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~Sp 272 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSP 272 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCc
Confidence 0 111111 23447777778899999999999999999
Q ss_pred hHhhhHHHHHHHHHHhhhhhhhhhhhcccCC
Q 016048 364 KAQGCISGICSFANLVSPLAFSPLTGDCRFS 394 (396)
Q Consensus 364 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 394 (396)
...|+...+..+|-++|-++++.+.+.+.+.
T Consensus 273 lYlgi~~~~~~lGPaiGfllgS~~l~lYvD~ 303 (735)
T KOG3626|consen 273 LYLGILYSMAILGPAIGFLLGSFCLKLYVDF 303 (735)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHeeecc
Confidence 9999999999999999999999988876553
No 288
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.29 E-value=2.4 Score=36.10 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhhhhhhhHHHHhhhh
Q 016048 245 AIVAFLSNLADAGLQGSMMYYLKAK 269 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (396)
.+.........++.+..=..|.+++
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333344444566554444566665
No 289
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=93.67 E-value=1.1 Score=40.27 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchhhhHH
Q 016048 5 SGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVP 84 (396)
Q Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~ 84 (396)
+....++.+.++...+.-+---....++.+.. +.|....+.-..+-....++..++.|...|+..|+|++...
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~-------gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLG-------GNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHc-------CceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 34455677777777776665555555544432 11112233333334455677788899999999999998876
Q ss_pred HHH
Q 016048 85 ITL 87 (396)
Q Consensus 85 ~~~ 87 (396)
+.+
T Consensus 100 L~l 102 (503)
T KOG2601|consen 100 LLL 102 (503)
T ss_pred Hhh
Confidence 655
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.54 E-value=1 Score=42.17 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=90.1
Q ss_pred chHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHH-HHHHHHHHHHhHHHHhhhhcccccccccCCc-hhhhHH
Q 016048 7 VSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAI-YLSGFQQAIIGLGTLVMMPLVGNLSDKYGRK-ALLTVP 84 (396)
Q Consensus 7 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~-~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk-~~~~~~ 84 (396)
++...+..++.++..-.+.|.+....... +.+.+. +..-....++.++-.+|-.+..+.. .-++| +.+.+.
T Consensus 271 i~~~~~~vf~~F~vTL~vFPgv~~~i~~~------~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~ 343 (437)
T TIGR00939 271 VWLLAFSVVFVFTVTLSVFPAITTAVTSS------GLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPIL 343 (437)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEeecc------CCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHH
Confidence 44456666666655555555554332221 111111 3556777888899998887554431 11222 133333
Q ss_pred HHHhHHH---HHHHHhcc------CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhH
Q 016048 85 ITLSIIP---LAILAYSR------SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFV 155 (396)
Q Consensus 85 ~~~~~~~---~~~~~~~~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 155 (396)
.+.-.+. .++|..-+ -.++-+..++.-++.|+ ..|-.......+..+..++++|..+-.+......+|..
T Consensus 344 s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl-tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~ 422 (437)
T TIGR00939 344 SFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF-SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLA 422 (437)
T ss_pred HHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3333222 23332221 00125677778999999 88988888999999999999999888888888888888
Q ss_pred HHHHHHH
Q 016048 156 CGTISAR 162 (396)
Q Consensus 156 ~g~~~~~ 162 (396)
+|..++-
T Consensus 423 ~Gs~l~~ 429 (437)
T TIGR00939 423 LGAVLSF 429 (437)
T ss_pred HHHHHHH
Confidence 8876653
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.72 E-value=0.61 Score=39.76 Aligned_cols=133 Identities=17% Similarity=0.158 Sum_probs=83.6
Q ss_pred HHHHHHHHhHHHHhhhhcccccccccCCc--hhhhHHHHHhHHHHHHHH----hccCchhHHHHHHHHHHHhhhccchhh
Q 016048 50 SGFQQAIIGLGTLVMMPLVGNLSDKYGRK--ALLTVPITLSIIPLAILA----YSRSRNFFYAYYVLRTLTAMVCEGSIH 123 (396)
Q Consensus 50 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~r~l~G~~~~~~~~ 123 (396)
-|.+.+.+.++.++|+-+..++..|-..| +.+.+..++.+....+.. .+++..+...-+++..+.-. +.|..+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~-cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA-CVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH-HHhhcc
Confidence 38899999999999999888887765543 455555555444443322 33333223333455555555 678899
Q ss_pred HHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHH----HHHhhhHHHHHHHHHHHHHHHHH
Q 016048 124 CLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTIS----ARFISTSAAFQAATAGSIISAVY 183 (396)
Q Consensus 124 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~----~~~~~~~~~f~~~~~~~~~~~~~ 183 (396)
|....+-.+..|+++|...+.++..-.++=..++-.. +...+-|..|-+..+...+..+.
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 9999999999999999988887765444333332111 01124467777766665555443
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.46 E-value=2.1 Score=38.64 Aligned_cols=141 Identities=11% Similarity=0.038 Sum_probs=75.0
Q ss_pred ChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhh-----hhcchhH-HHH
Q 016048 238 SPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAP-----TVGEARL-LSF 311 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~g~~~~-~~~ 311 (396)
++++..+...+..+...... ...+|..++.. |.|-...+.......=. --. ++...+.| |+||||. +.-
T Consensus 30 ~~~illLl~LYllQGiP~GL-~~~iP~lL~ak-~vSyt~~a~fS~ay~P~--sLK-llWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGL-IGAIPLLLQAK-GVSYTSQAIFSFAYWPF--SLK-LLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhH-hhhhHHHhcCC-CcchhhhhhhhhhhhHH--HHH-HHHHhhhHHHHHHhhccccceeee
Confidence 35566666666666665444 44788888754 66655433332221111 111 22334556 8998775 344
Q ss_pred HHHHHHHHHHHHHHhhhhh---------HHHH---HHHHHHhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHh
Q 016048 312 GLLFGCVHMFLYSVAWSSW---------VPYA---AAVFSILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLV 379 (396)
Q Consensus 312 ~~~~~~i~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 379 (396)
+..+.+..+.++....+.+ .... .+++-+..+.-..+...+.-.+..+++.|-++.........|.++
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 4555555555555432211 1111 223333344444566777777788888877766555555566665
Q ss_pred hhhh
Q 016048 380 SPLA 383 (396)
Q Consensus 380 ~~~~ 383 (396)
+-.+
T Consensus 185 ~~~i 188 (510)
T KOG3574|consen 185 GNVV 188 (510)
T ss_pred hcce
Confidence 5443
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.31 E-value=7.1 Score=34.61 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=49.5
Q ss_pred HHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCC
Q 016048 60 GTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVP 135 (396)
Q Consensus 60 ~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 135 (396)
.-+..+.+.+.+.+++|-|..+.++......... .+-.+.++.++-.-...|+ +.+..+..--+|+++...
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA----~Nl~pr~~tlVPa~~~~G~-aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA----ANLEPRYETLVPAGLVLGM-AAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hhcchhHHhhccHHHhhcc-ccccccccCcceecHHHH
Confidence 3344455555889999999999988776654322 2222337888888999999 888888777777766544
No 294
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.18 E-value=0.011 Score=49.49 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=35.8
Q ss_pred CChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHH
Q 016048 237 SSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQ 292 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 292 (396)
++-.+....+.+.+.-........+++.|..+..+++.+..+++-++..+.....+
T Consensus 199 ~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS 254 (412)
T KOG4830|consen 199 GHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVS 254 (412)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHH
Confidence 34556666666666655555566778888877767776665666555555555555
No 295
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=89.72 E-value=1.9 Score=39.50 Aligned_cols=85 Identities=11% Similarity=0.074 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh---------hHHHH-HHHHHHhhhhhhhhhhHHHhhccCCc---cchhHhhhHHHHH
Q 016048 307 RLLSFGLLFGCVHMFLYSVAWSS---------WVPYA-AAVFSILSVFSHPCLRTIVSKQVASN---EQGKAQGCISGIC 373 (396)
Q Consensus 307 ~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~ 373 (396)
+++..+.++..++.+++.....+ ....+ ..++++|.|+.-|...++..|.++++ +|.+.+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888885554321 22333 56678999999999999999999866 4677888889999
Q ss_pred HHHHHhhhhhhhhhhhcc
Q 016048 374 SFANLVSPLAFSPLTGDC 391 (396)
Q Consensus 374 ~~g~~~~~~~~g~l~~~~ 391 (396)
++|..+++.+.+++-++.
T Consensus 82 n~G~~~~~~~~~~i~~~~ 99 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY 99 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS
T ss_pred hhhhHhhcccchhhcccc
Confidence 999999999999887653
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.22 E-value=5.4 Score=36.53 Aligned_cols=131 Identities=14% Similarity=0.193 Sum_probs=85.0
Q ss_pred cccccchhhhhhhccCCCCCcchhHHHHHHHHHHH-HhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHH----
Q 016048 22 SMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAI-IGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILA---- 96 (396)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~-~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~---- 96 (396)
.....+.|-+..+. +.+...+.+..-+.... +.+...+|.+...++-++= ||.. .+..++-.+..-+..
T Consensus 260 ~VTLsiFPg~~~~~----~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~ 333 (406)
T KOG1479|consen 260 FVTLSIFPGFCSEV----KSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNY 333 (406)
T ss_pred eeeeEecchhhccc----ccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhcc
Confidence 34444566665553 22222345666777777 8999999988777776653 3333 333333333222222
Q ss_pred -----hccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHH
Q 016048 97 -----YSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISAR 162 (396)
Q Consensus 97 -----~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 162 (396)
+-.+ -++++..-.+.|+ ..|-.....+.+..+-.|++++..+-.+.......|...|..++.
T Consensus 334 ~~~~v~~~~---~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 334 PPLPVVFES---DGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred CCCCceecC---chHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 1233 5778888999999 889888889999999999888877777777777777766665543
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=87.84 E-value=13 Score=36.25 Aligned_cols=145 Identities=16% Similarity=0.103 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhh-cchhHHHHHHHHHHHHHHH
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTV-GEARLLSFGLLFGCVHMFL 322 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~i~~~~ 322 (396)
.+....+-..++++....+..|+.+.++.+...+.-......-...... +.+++++|.+ ||-+++.++.++..+++.+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 3444455566667777778888888888887666655555555555555 6778999974 8989999988888888666
Q ss_pred HHHhhhhh-------------------------HHHH-HHHHHHhhhhhhhhhhHHHhhccCCc----c--chhHhhhHH
Q 016048 323 YSVAWSSW-------------------------VPYA-AAVFSILSVFSHPCLRTIVSKQVASN----E--QGKAQGCIS 370 (396)
Q Consensus 323 ~~~~~~~~-------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~----~--~g~~~g~~~ 370 (396)
+....... .... ..+..+|.++.-|...++-.|.++++ . +..-+....
T Consensus 121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y 200 (571)
T KOG1237|consen 121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY 200 (571)
T ss_pred HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence 65432110 1111 22334567777899999999988832 2 235666677
Q ss_pred HHHHHHHHhhhhhhhhhhh
Q 016048 371 GICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 371 ~~~~~g~~~~~~~~g~l~~ 389 (396)
...+.|..++-.+.-++-|
T Consensus 201 f~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 201 FSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 7777888777766666543
No 298
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=84.38 E-value=24 Score=29.91 Aligned_cols=23 Identities=13% Similarity=0.085 Sum_probs=14.4
Q ss_pred HHhhhhhhcchhHHHHHHHHHHH
Q 016048 296 MPVLAPTVGEARLLSFGLLFGCV 318 (396)
Q Consensus 296 ~~~l~~~~g~~~~~~~~~~~~~i 318 (396)
+.+++.|+..|++...+-.++.+
T Consensus 260 Gk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred hHHHhhhheeEEEEEecchhHHH
Confidence 35677888877766655444433
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.24 E-value=5.2 Score=35.09 Aligned_cols=74 Identities=14% Similarity=0.101 Sum_probs=57.1
Q ss_pred HhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHh
Q 016048 87 LSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFI 164 (396)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~ 164 (396)
++.+.-.+..+.++ +|..++.-+.-|+ -+|..++-..--+.+-.++++|..+++....+-++|..++..++-.+
T Consensus 328 ~ff~~~a~~~ftps---i~ivf~lI~~EGL-lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 328 LFFLLQAWYWFTPS---IWIVFALILFEGL-LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHhccH---HHHHHHHHHHHhh-cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 34444455667788 8888888899999 55666766666677777889999999999999999988887776544
No 300
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=82.72 E-value=0.49 Score=42.06 Aligned_cols=150 Identities=18% Similarity=0.180 Sum_probs=3.7
Q ss_pred cchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHH-HHHHHHhHHHHhhhhcccccccc-cCCchhhhH
Q 016048 6 GVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSG-FQQAIIGLGTLVMMPLVGNLSDK-YGRKALLTV 83 (396)
Q Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~~~~ 83 (396)
+.+...+..++..+..-...|.+........ ..+ .+.+... ....++.++-.+|..+.++.-=+ -.+|+.. +
T Consensus 144 ~i~~~~~~i~~~f~vTl~~FP~it~~v~s~~---~~~--~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~ 217 (309)
T PF01733_consen 144 KIWPYALSIFLVFFVTLSVFPGITSAVQSSN---NPD--WSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-I 217 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhheeeeccceeeeeeccc---cCC--CccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHH-H
Confidence 3445556666666666666666633322211 111 1112222 45667888888888877664211 0244433 3
Q ss_pred HHHHhHHH---HHHHHhccC-------chhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhh
Q 016048 84 PITLSIIP---LAILAYSRS-------RNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGA 153 (396)
Q Consensus 84 ~~~~~~~~---~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 153 (396)
..+.-.+. .++|-.-++ .++-+..++.-++.|+ ..|-..+..+.+..+..++++|..+-.+.......|
T Consensus 218 ~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~-TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 218 LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF-TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp --------------------------------------------------HHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH-ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 32332222 222211111 0114667788889999 899988999999999999999988888888888888
Q ss_pred hHHHHHHHH
Q 016048 154 FVCGTISAR 162 (396)
Q Consensus 154 ~~~g~~~~~ 162 (396)
..+|..++-
T Consensus 297 l~~Gs~ls~ 305 (309)
T PF01733_consen 297 LFIGSVLSF 305 (309)
T ss_dssp ---------
T ss_pred HHHHHHHHH
Confidence 888776653
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=79.20 E-value=63 Score=31.24 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcc
Q 016048 281 MVIAGIAGTISQLIMMPVLAPTVGE 305 (396)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~g~ 305 (396)
.....+.+.++. ..++++.+.++.
T Consensus 303 i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 334444444544 444455555553
No 302
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=74.51 E-value=34 Score=30.53 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHH
Q 016048 285 GIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVH 319 (396)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~ 319 (396)
...-+..+ .+.+.+++++|.|.++..+.......
T Consensus 68 y~~l~~s~-m~~~~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 68 YLSLIDSS-MFMPLLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred hHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33344445 44458889999999887776665443
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=73.58 E-value=31 Score=29.58 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=57.0
Q ss_pred HHHHHHHHhHHHHhhhhccccccc-ccCCchhhh----HHHHHhHHHHHHH-HhccCc-hhHHHHHHHHHHHhhhccchh
Q 016048 50 SGFQQAIIGLGTLVMMPLVGNLSD-KYGRKALLT----VPITLSIIPLAIL-AYSRSR-NFFYAYYVLRTLTAMVCEGSI 122 (396)
Q Consensus 50 ~g~~~s~~~l~~~~~~~~~G~l~D-r~Grk~~~~----~~~~~~~~~~~~~-~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 122 (396)
.....-++..+..+|....|.+.. ++.||+-+. .+.+...+..++. .+..+. ..+..+++.-++.|. +.=+.
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~-f~Wgi 221 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGF-FLWGI 221 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HHHhh
Confidence 345555667777788888888877 456666554 2344444444442 122221 125667788888887 32222
Q ss_pred hHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHH
Q 016048 123 HCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 123 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 156 (396)
.+ ....+..-+++.++.+.--.++..+++|.++
T Consensus 222 Q~-ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 222 QG-VILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hH-HHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 22 2333444444444444444555566666654
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.17 E-value=17 Score=26.04 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhHHHHhhhhccccccccc-CCchhhhH
Q 016048 48 YLSGFQQAIIGLGTLVMMPLVGNLSDKY-GRKALLTV 83 (396)
Q Consensus 48 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~~~~ 83 (396)
...++-.+.-.++..+.....||+.||| |-++..++
T Consensus 42 ~~~a~klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 42 YAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 3445555666677777777789999987 44544443
No 305
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=61.64 E-value=1.5e+02 Score=28.35 Aligned_cols=42 Identities=7% Similarity=-0.066 Sum_probs=38.2
Q ss_pred hhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhhhh
Q 016048 348 CLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPLTG 389 (396)
Q Consensus 348 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 389 (396)
..+.+++|.++.++..+..++.....++|..++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999888887776
No 306
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=61.51 E-value=17 Score=32.72 Aligned_cols=97 Identities=19% Similarity=0.124 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhHHHHhhhhcccccccccCCchhhhH--HHHHhHHHHHHHHhccCchhHHHHHHHHHHHhhhccchhhHH
Q 016048 48 YLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTV--PITLSIIPLAILAYSRSRNFFYAYYVLRTLTAMVCEGSIHCL 125 (396)
Q Consensus 48 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 125 (396)
...|..-++..+..+++.+..|.+--++.|..-+++ +.+.-+...+++..+++ +|..+++.++... .-....+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~---Iw~~Ya~yvlfr~-~y~l~iti 346 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH---IWVCYAGYVLFRV-IYQLTITI 346 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc---eehhhhhHHHHHh-hHhhhhhH
Confidence 356888888899999999999999888887644444 44444444455556666 7887777777766 55666777
Q ss_pred HHHHHhcCCCcccchhHHHHHHH
Q 016048 126 SLAYVADNVPPGRRASVFGIFSG 148 (396)
Q Consensus 126 ~~~~i~~~~~~~~r~~~~~~~~~ 148 (396)
+..-+++..++|.-|..+|+...
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHH
Confidence 88888888887777777766544
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.80 E-value=60 Score=25.29 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=28.7
Q ss_pred hhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHh
Q 016048 343 VFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLV 379 (396)
Q Consensus 343 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 379 (396)
.+...+.|..++...++++.|+..|+-.+-.+++...
T Consensus 109 ~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 109 LGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3344567788888899999999999998888776543
No 308
>PRK11469 hypothetical protein; Provisional
Probab=53.09 E-value=1.2e+02 Score=24.59 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 282 VIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
.............++.++.+++++|.-+..+.++..++.-.+
T Consensus 141 g~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 141 GCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333332454555666777777777777777776544
No 309
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=51.91 E-value=1.2e+02 Score=30.69 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=29.6
Q ss_pred ccccccccc----CCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhh
Q 016048 67 LVGNLSDKY----GRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAM 116 (396)
Q Consensus 67 ~~G~l~Dr~----Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 116 (396)
+.+-++|.= ||.+-++++.++++++++...+.... .|.+...-.+.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~--p~~~~~~l~~~tf 93 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPK--PWLFPFLLTLLTF 93 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHH
Confidence 345556633 56777888888888888877766552 3444444444443
No 310
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=48.74 E-value=2.4e+02 Score=26.62 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=25.9
Q ss_pred CcccchhHHHHHHHhhhhhhHHHHHHHHHhhhH
Q 016048 135 PPGRRASVFGIFSGIVSGAFVCGTISARFISTS 167 (396)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 167 (396)
.+.+.+...++.+...+.|.+.-|...+..|..
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~Gf~ 50 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLI 50 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcchHH
Confidence 346678888999999999999888888766543
No 311
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=47.39 E-value=2.3e+02 Score=26.15 Aligned_cols=148 Identities=14% Similarity=0.037 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHH--
Q 016048 244 AAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMF-- 321 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~-- 321 (396)
+....++....--........|+.+..|-+-...+..-..-+...++.. .+.|...|+..|+|++.....+.=++..
T Consensus 32 Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg-~ivGq~vDg~sr~Kvi~~~L~lqNlSv~va 110 (503)
T KOG2601|consen 32 LYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLG-PIVGQWVDGMSRVKVIQTWLLLQNLSVIVA 110 (503)
T ss_pred hhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhH-HHHHHHhcchhHHHHHHHHHhhccHHHHHH
Confidence 3344444444444444455666666555444444444444444444444 3335677888898876655443222211
Q ss_pred ----HHHH-hh-----hhhHHHHHHHHHHhh---hhhhhhhhH------HH---hhccCCccchhHhhhHHHHHHHHHHh
Q 016048 322 ----LYSV-AW-----SSWVPYAAAVFSILS---VFSHPCLRT------IV---SKQVASNEQGKAQGCISGICSFANLV 379 (396)
Q Consensus 322 ----~~~~-~~-----~~~~~~~~~~~~~~~---~~~~~~~~~------~~---~~~~p~~~~g~~~g~~~~~~~~g~~~ 379 (396)
+..+ .+ +.+....+.++.... +-....... ++ +|--+++.....++.....-.....+
T Consensus 111 gglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~L 190 (503)
T KOG2601|consen 111 GGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLL 190 (503)
T ss_pred HHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhch
Confidence 1111 11 111111122221111 111111111 11 11122233344446666677788889
Q ss_pred hhhhhhhhhhccc
Q 016048 380 SPLAFSPLTGDCR 392 (396)
Q Consensus 380 ~~~~~g~l~~~~~ 392 (396)
.|.+.|.+.++..
T Consensus 191 apv~tg~Iitfvs 203 (503)
T KOG2601|consen 191 APVITGLIITFVS 203 (503)
T ss_pred hhhhhcccceeec
Confidence 9999999887754
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.04 E-value=1.1e+02 Score=22.16 Aligned_cols=19 Identities=16% Similarity=0.069 Sum_probs=10.2
Q ss_pred HHhhhhhh-cchhHHHHHHH
Q 016048 296 MPVLAPTV-GEARLLSFGLL 314 (396)
Q Consensus 296 ~~~l~~~~-g~~~~~~~~~~ 314 (396)
.||+.||+ +.+++-++.++
T Consensus 62 iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 62 IGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHhcCCCcHHHHHHH
Confidence 36777775 44544433333
No 313
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=45.85 E-value=2.5e+02 Score=26.05 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=26.2
Q ss_pred CcccchhHHHHHHHhhhhhhHHHHHHHHHhhhHH
Q 016048 135 PPGRRASVFGIFSGIVSGAFVCGTISARFISTSA 168 (396)
Q Consensus 135 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 168 (396)
.+++.+....+.+...+.|.+.-|..++.-+|..
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i~ 35 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLWV 35 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 4567788889999999999998888766555543
No 314
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=44.99 E-value=1.2e+02 Score=21.99 Aligned_cols=36 Identities=8% Similarity=-0.006 Sum_probs=24.8
Q ss_pred hcCChhHHHHHHHHHHHHHhhhhhhhhHHHHhhhhc
Q 016048 235 LKSSPTFSQAAIVAFLSNLADAGLQGSMMYYLKAKF 270 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (396)
+++.+.+.+.......+.+.+.....+..+++.+.+
T Consensus 45 l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 45 LSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555666666667777777778888888887653
No 315
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=44.65 E-value=1.4e+02 Score=26.12 Aligned_cols=25 Identities=12% Similarity=0.025 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCC
Q 016048 170 FQAATAGSIISAVYMRIFLPESVRD 194 (396)
Q Consensus 170 f~~~~~~~~~~~~~~~~~~~e~~~~ 194 (396)
+.+.++...+..++.+.+.|..|.+
T Consensus 78 ~~~Gglwy~~lsl~~~~l~p~r~~r 102 (284)
T PF12805_consen 78 FLAGGLWYLLLSLLWWPLRPYRPVR 102 (284)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 3344455555555566666765543
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.34 E-value=23 Score=25.46 Aligned_cols=50 Identities=20% Similarity=0.136 Sum_probs=41.2
Q ss_pred HHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc
Q 016048 50 SGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR 99 (396)
Q Consensus 50 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~ 99 (396)
.|=+.+.|.-.+++.++++++..|+.-+.+-=.++..++.++..+..+.+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 47777888888999999999999999988888888888888777665544
No 317
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=42.08 E-value=1.4e+02 Score=30.21 Aligned_cols=47 Identities=15% Similarity=0.086 Sum_probs=28.5
Q ss_pred ccccccc----cCCchhhhHHHHHhHHHHHHHHhccCchhHHHHHHHHHHHhh
Q 016048 68 VGNLSDK----YGRKALLTVPITLSIIPLAILAYSRSRNFFYAYYVLRTLTAM 116 (396)
Q Consensus 68 ~G~l~Dr----~Grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 116 (396)
.+-++|. -||.+-++++.+++.++++...+.... .|.+..+-++.++
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~--p~lf~~~l~~~tf 93 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK--PWLFAVGLTVSTF 93 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHH
Confidence 4556663 366677778888888887777765442 3444444444444
No 318
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=41.49 E-value=3.3e+02 Score=26.12 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=74.7
Q ss_pred hhhhccc---cccchhhHHHHHHH-HHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhh-------------
Q 016048 266 LKAKFHF---NKNQFADLMVIAGI-AGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWS------------- 328 (396)
Q Consensus 266 ~~~~~g~---~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~------------- 328 (396)
++|.+.. +++....+-...-+ .+++.. .+..++.++..+.++...-.......++++++.-.
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~-~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~ 127 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFT-IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFS 127 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHH
Confidence 4454433 34444444443333 344444 45568888888888776666555555555553210
Q ss_pred -------h------------hHHHHHHHHH--HhhhhhhhhhhHHHhhccCCccchhHhhhHHHHHHHHHHhhhhhhhhh
Q 016048 329 -------S------------WVPYAAAVFS--ILSVFSHPCLRTIVSKQVASNEQGKAQGCISGICSFANLVSPLAFSPL 387 (396)
Q Consensus 329 -------~------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 387 (396)
+ |......++. .+.-...-..+...+|.+..++..+-.++.+...+++..++..+..++
T Consensus 128 ~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 128 RDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111221 112222336778899999999999999999999999998888887777
Q ss_pred hhc
Q 016048 388 TGD 390 (396)
Q Consensus 388 ~~~ 390 (396)
.++
T Consensus 208 ~k~ 210 (509)
T COG3202 208 SKH 210 (509)
T ss_pred hhc
Confidence 653
No 319
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=40.48 E-value=2.5e+02 Score=24.56 Aligned_cols=45 Identities=13% Similarity=0.254 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 283 IAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYSVAWSSW 330 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 330 (396)
++.+..++...+ ++-||++|-+.+.++....++.....-...-+|
T Consensus 107 InPL~~VllG~l---flkErls~~Q~iAV~lA~~GV~~~~~~~g~lpw 151 (293)
T COG2962 107 INPLVNVLLGRL---FLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPW 151 (293)
T ss_pred HHHHHHHHHHHH---HHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 344444444413 456999988888877777766655554443333
No 320
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=40.43 E-value=2.1e+02 Score=23.64 Aligned_cols=25 Identities=20% Similarity=0.511 Sum_probs=12.1
Q ss_pred HHHHHHH-hhhhhhHHHHHHHHHhhh
Q 016048 142 VFGIFSG-IVSGAFVCGTISARFIST 166 (396)
Q Consensus 142 ~~~~~~~-~~~~g~~~g~~~~~~~~~ 166 (396)
..+.++. +..+|..+|..++.+++-
T Consensus 35 ~ig~~~~~~~~lg~~~G~~~~~~i~~ 60 (206)
T TIGR02840 35 IIAVISGLFIFISMLLGKFLAKFLPP 60 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 3444433 334555555555555543
No 321
>PRK02237 hypothetical protein; Provisional
Probab=38.12 E-value=45 Score=24.05 Aligned_cols=50 Identities=14% Similarity=0.025 Sum_probs=40.9
Q ss_pred HHHHHHHHhHHHHhhhhcccccccccCCchhhhHHHHHhHHHHHHHHhcc
Q 016048 50 SGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTVPITLSIIPLAILAYSR 99 (396)
Q Consensus 50 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~~~~~~~~~~~~~~~~~~~~ 99 (396)
.|=+.+.|.-.+++.++++++..|+.-+-+-=.++..++.++..+..+.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 57778888888999999999999999887777788888877776665544
No 322
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.64 E-value=2.3e+02 Score=23.28 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=13.8
Q ss_pred HHHHhhhhccccc---ccccCCchhhhHHHHHhHH
Q 016048 59 LGTLVMMPLVGNL---SDKYGRKALLTVPITLSII 90 (396)
Q Consensus 59 l~~~~~~~~~G~l---~Dr~Grk~~~~~~~~~~~~ 90 (396)
.+..+|..+.+.+ .+|..+|+.......+..+
T Consensus 57 ~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ 91 (209)
T PF06912_consen 57 LSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAI 91 (209)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 3344444445555 2334444444444444333
No 323
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=37.51 E-value=3e+02 Score=25.21 Aligned_cols=173 Identities=11% Similarity=-0.015 Sum_probs=0.0
Q ss_pred CCccccchHHHHHHHHHHhhccccccchhhhhhhccCCCCCcchhHHHHHHHHHHHHhHHHHhhhhcccccccccCCchh
Q 016048 1 MEKKSGVSHLFITIFVHCFSTSMVAPAITDVTMSAVCPGRDECSLAIYLSGFQQAIIGLGTLVMMPLVGNLSDKYGRKAL 80 (396)
Q Consensus 1 m~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 80 (396)
|+.+..+....+.+...++.+......+..+ -.+-+..+.+.+.+.|.....+|+...-++.|.--.-+.
T Consensus 6 ~~~~alL~laVf~~aa~GlvyElal~tLaty----------LlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~F 75 (508)
T COG4262 6 NRWRALLLLAVFVCAACGLVYELALGTLATY----------LLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARF 75 (508)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------hcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHH
Q ss_pred hhHHHHHhHHHHHHHHhcc---------CchhHHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhh
Q 016048 81 LTVPITLSIIPLAILAYSR---------SRNFFYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVS 151 (396)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 151 (396)
+..-.++..++..-.+... + -+.+++.-.+.|. -.|...|..+.++.. ..++-....+.....-.
T Consensus 76 v~vElllgligg~Sa~~ly~~FA~~~~~~---~~Vly~lt~vIG~-LVG~EiPL~mrml~~--r~a~~k~~~s~vl~~DY 149 (508)
T COG4262 76 VDVELLLGLIGGVSAAALYLLFALESAPS---RLVLYALTAVIGV-LVGAEIPLLMRMLQR--RQAKAKDLGSRVLTLDY 149 (508)
T ss_pred HHHHHHHHHhccchHHHHHHHHHhccchH---HHHHHHHHHHHHH-HHhcchHHHHHHHHH--HHHHHHhhhhhhhhhHh
Q ss_pred hhhHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhcC
Q 016048 152 GAFVCGTISARFI-----STSAAFQAATAGSIISAVYMRIFLP 189 (396)
Q Consensus 152 ~g~~~g~~~~~~~-----~~~~~f~~~~~~~~~~~~~~~~~~~ 189 (396)
+|.+.+.++-.++ |--..-...+.+.++.++...+.++
T Consensus 150 LGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~fllr 192 (508)
T COG4262 150 LGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLFLLR 192 (508)
T ss_pred hhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHH
No 324
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=37.11 E-value=3.6e+02 Score=25.29 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=15.6
Q ss_pred cchhhHHHHHHHhcCCCcccchhHH
Q 016048 119 EGSIHCLSLAYVADNVPPGRRASVF 143 (396)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~r~~~~ 143 (396)
.+..+.+..++.++.+|+.+-.+.+
T Consensus 175 tg~~~~avaalf~qL~~~a~~t~g~ 199 (536)
T COG3559 175 TGMVFTAVAALFAQLSPSARFTRGV 199 (536)
T ss_pred HHHHHHHHHHHHHHhCccccccchh
Confidence 3556667777888888755433333
No 325
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=35.13 E-value=85 Score=22.62 Aligned_cols=49 Identities=14% Similarity=0.078 Sum_probs=36.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Q 016048 275 NQFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLYS 324 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 324 (396)
+..|-.+..++-.-++.+ ++.++..|+..+.+.=.++..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~S-l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVAS-LLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHH-HHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 456788888888888888 7778999998877766666666666655443
No 326
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=32.28 E-value=65 Score=26.02 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=14.0
Q ss_pred hHHHHhhhhcccccccccCC
Q 016048 58 GLGTLVMMPLVGNLSDKYGR 77 (396)
Q Consensus 58 ~l~~~~~~~~~G~l~Dr~Gr 77 (396)
.+++.+.+.+.|+++||.-+
T Consensus 92 L~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 92 LIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 45666777777777777764
No 327
>PRK02237 hypothetical protein; Provisional
Probab=28.78 E-value=1.6e+02 Score=21.30 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=35.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHH
Q 016048 276 QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLLSFGLLFGCVHMFLY 323 (396)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 323 (396)
..|-.+..++-.-++.+ ++.++..|+..+-+.=.++..++.++..++
T Consensus 57 ~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 46788888888888888 777899999877666666666666665544
No 328
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=28.39 E-value=1e+02 Score=22.21 Aligned_cols=30 Identities=13% Similarity=0.147 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 016048 164 ISTSAAFQAATAGSIISAVYMRIFLPESVR 193 (396)
Q Consensus 164 ~~~~~~f~~~~~~~~~~~~~~~~~~~e~~~ 193 (396)
.+|+.+|++...++++.+.+.+.+.||+..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 378889988887777777767677787653
No 329
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=28.20 E-value=1.1e+02 Score=26.42 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=36.5
Q ss_pred hhhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHH---------hhhhhhcchh
Q 016048 254 ADAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMP---------VLAPTVGEAR 307 (396)
Q Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~~g~~~ 307 (396)
......+++-.|+.+. |.++...+.++....+...+.. ++.| +-.||+|||+
T Consensus 32 tAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st-~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 32 TASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAIST-PFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred HHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhc-ccccccccccccHHHhhhhccee
Confidence 3344456677777776 9999888888877778787777 4443 3357888875
No 330
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=27.86 E-value=5.7e+02 Score=24.78 Aligned_cols=51 Identities=10% Similarity=0.142 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhH
Q 016048 104 FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFV 155 (396)
Q Consensus 104 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 155 (396)
+..+++..++..+ ..-....+..++-+.+.+|.-=|..|.+.+...++|.-
T Consensus 405 f~lvI~~~~l~sf-~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 405 FLLVIIQHVLSSF-MSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 4445556666666 66777888899999999999999999999999998854
No 331
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=27.48 E-value=4.4e+02 Score=23.37 Aligned_cols=50 Identities=4% Similarity=-0.002 Sum_probs=28.3
Q ss_pred ccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHHHHHHHHHhhhHHHH
Q 016048 118 CEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVCGTISARFISTSAAF 170 (396)
Q Consensus 118 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~f 170 (396)
+.....|....+...=.| .+.++++.-+...+....-......++|+...
T Consensus 65 C~c~~~P~~~~l~~~Ga~---~~~~~aFl~a~p~~n~~~~~~~~~~lg~~~~~ 114 (307)
T PF03773_consen 65 CSCGAVPVARGLLRKGAP---LGAAMAFLLASPLLNPIVLLLTWAALGWKFTL 114 (307)
T ss_pred CcccHHHHHHHHHHCCCC---cchhHHHHHhhHHhhHHHHHHHHHHhCcHHHH
Confidence 334444555555554333 45566666666666655555556667876543
No 332
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=26.66 E-value=5.3e+02 Score=24.08 Aligned_cols=46 Identities=11% Similarity=-0.016 Sum_probs=29.8
Q ss_pred hhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 016048 255 DAGLQGSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQLIMMPVLAPT 302 (396)
Q Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (396)
..+-....|....+.. +++++...+.....+...+++ ++.....++
T Consensus 18 ~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~T-llq~~~~~~ 63 (415)
T TIGR00801 18 MFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGT-LLQLFRTGG 63 (415)
T ss_pred HHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHH-HHHHhhhcC
Confidence 3344445566666666 888887888777777777777 454444443
No 333
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.99 E-value=2e+02 Score=27.70 Aligned_cols=31 Identities=6% Similarity=0.042 Sum_probs=16.3
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHhhhhhh
Q 016048 272 FNKNQFADLMVIAGIAGTISQLIMMPVLAPTV 303 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 303 (396)
++|+.=|.+++..-+.-++.. +.+|+.+.|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G-~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMG-FVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHH-Hhhhhhhhhh
Confidence 455555555555555555554 4555555553
No 334
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.74 E-value=2.6e+02 Score=19.47 Aligned_cols=43 Identities=2% Similarity=-0.160 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccchhhHHH
Q 016048 240 TFSQAAIVAFLSNLADAGLQGSMMYYLKAKFHFNKNQFADLMV 282 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 282 (396)
..+.+....+...+.+.....+.|..+.....-+....|+...
T Consensus 17 ~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g 59 (91)
T PF04341_consen 17 LAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLG 59 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHH
Confidence 3344455555555566666666677666543322344445443
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=22.79 E-value=2.9e+02 Score=19.77 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=16.6
Q ss_pred Hhhhhccccccc-ccCCchhhhHHHHHhHHH
Q 016048 62 LVMMPLVGNLSD-KYGRKALLTVPITLSIIP 91 (396)
Q Consensus 62 ~~~~~~~G~l~D-r~Grk~~~~~~~~~~~~~ 91 (396)
.+...+.|.+.| ++|-++.+.+..++.++.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344445666666 567666555554444433
No 336
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=22.33 E-value=5.6e+02 Score=22.80 Aligned_cols=10 Identities=30% Similarity=0.634 Sum_probs=6.9
Q ss_pred ccccccCCch
Q 016048 70 NLSDKYGRKA 79 (396)
Q Consensus 70 ~l~Dr~Grk~ 79 (396)
.+++|-||++
T Consensus 16 kL~~r~gR~~ 25 (336)
T PF07168_consen 16 KLAERRGRLP 25 (336)
T ss_pred HHHHhcCCcc
Confidence 3567778876
No 337
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=21.99 E-value=6.4e+02 Score=23.39 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=22.8
Q ss_pred hhHHHHhhhhccccccchhhHHHHHHHHHHHHH
Q 016048 260 GSMMYYLKAKFHFNKNQFADLMVIAGIAGTISQ 292 (396)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 292 (396)
...|..+.+..|+++++...+.....+...+++
T Consensus 13 i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~t 45 (406)
T TIGR03173 13 VAVPLIVGGALGLSAEQTAYLISADLFACGIAT 45 (406)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 345666666668888776777776777777777
No 338
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=21.86 E-value=3.1e+02 Score=19.72 Aligned_cols=22 Identities=18% Similarity=0.214 Sum_probs=12.8
Q ss_pred hhhhhcchhHHHHHHHHHHHHH
Q 016048 299 LAPTVGEARLLSFGLLFGCVHM 320 (396)
Q Consensus 299 l~~~~g~~~~~~~~~~~~~i~~ 320 (396)
+-+|..+|+.........++.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~l 103 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVIL 103 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHH
Confidence 3477777777655554444433
No 339
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=21.73 E-value=4.9e+02 Score=21.89 Aligned_cols=17 Identities=0% Similarity=0.165 Sum_probs=9.1
Q ss_pred HHHHhhhhhhcchhHHH
Q 016048 294 IMMPVLAPTVGEARLLS 310 (396)
Q Consensus 294 ~~~~~l~~~~g~~~~~~ 310 (396)
++.|++..|++.++...
T Consensus 185 ~~~G~~~~~~~~~~~~~ 201 (225)
T cd02434 185 FLLGSFKSKLYNGKWII 201 (225)
T ss_pred HHHHHHHHHhcCCchHH
Confidence 44456666665554433
No 340
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=21.03 E-value=7.2e+02 Score=23.55 Aligned_cols=33 Identities=12% Similarity=0.018 Sum_probs=18.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhcchhHH
Q 016048 276 QFADLMVIAGIAGTISQLIMMPVLAPTVGEARLL 309 (396)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 309 (396)
.........++...+.. +++-+..+++.|-...
T Consensus 129 ~~~~~ili~g~l~~l~~-ifG~r~l~~l~~~a~~ 161 (442)
T COG1457 129 PVWAGILIIGVLMTLVT-IFGYRALHKLERIAVP 161 (442)
T ss_pred cHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHH
Confidence 34455555666666666 5555555555554333
No 341
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=20.98 E-value=2.9e+02 Score=21.57 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhccchhhHHHHHHHhcCCCcccchhHHHHHHHhhhhhhHH
Q 016048 104 FYAYYVLRTLTAMVCEGSIHCLSLAYVADNVPPGRRASVFGIFSGIVSGAFVC 156 (396)
Q Consensus 104 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 156 (396)
...+++.-.+.|+ | ...+.+.+++--.++++.|..+|+-..-.+++.+.
T Consensus 97 ~~~~~~S~~~Fg~-g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGL-G---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHH-H---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4555555656565 3 23456777777778888999999988887777554
No 342
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.31 E-value=46 Score=25.11 Aligned_cols=16 Identities=13% Similarity=-0.041 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 016048 167 SAAFQAATAGSIISAV 182 (396)
Q Consensus 167 ~~~f~~~~~~~~~~~~ 182 (396)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555555444444433
No 343
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=20.21 E-value=1.6e+02 Score=22.86 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=18.4
Q ss_pred HhHHHHhhhhcccccccccCCch
Q 016048 57 IGLGTLVMMPLVGNLSDKYGRKA 79 (396)
Q Consensus 57 ~~l~~~~~~~~~G~l~Dr~Grk~ 79 (396)
|.++..+.+.+.|++.||..+++
T Consensus 62 yl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 62 YLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 46777888888999999988764
No 344
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=20.13 E-value=5.1e+02 Score=21.47 Aligned_cols=15 Identities=0% Similarity=0.118 Sum_probs=7.3
Q ss_pred HHHhhhhhhcchhHH
Q 016048 295 MMPVLAPTVGEARLL 309 (396)
Q Consensus 295 ~~~~l~~~~g~~~~~ 309 (396)
+.|....|+..++..
T Consensus 176 ~~G~~~a~~~~~~~~ 190 (213)
T PF01988_consen 176 ILGYFKARISGQSWW 190 (213)
T ss_pred HHHHHHHHHcCCcHH
Confidence 335555555544433
No 345
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.10 E-value=4.6e+02 Score=24.76 Aligned_cols=11 Identities=9% Similarity=0.090 Sum_probs=5.2
Q ss_pred HHhhhhhhcch
Q 016048 296 MPVLAPTVGEA 306 (396)
Q Consensus 296 ~~~l~~~~g~~ 306 (396)
+|-+..|.|-|
T Consensus 347 ~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 347 SGSFYARLGGR 357 (593)
T ss_pred cceeeehhccH
Confidence 33444566543
Done!