BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016049
(396 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118486579|gb|ABK95128.1| unknown [Populus trichocarpa]
Length = 523
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 309/395 (78%), Positives = 346/395 (87%), Gaps = 8/395 (2%)
Query: 1 MQTVKLAAIPAAFSSSCFMFRPVTKTLGL--ISRRNH---SQKPPFRLLARAFSAPALQT 55
+QT+KLAAIPA SS F+ +P++KTL L SR N+ Q+ PF+LL RA S+ A+QT
Sbjct: 12 IQTLKLAAIPA---SSRFILKPISKTLVLNPFSRHNYVICPQRNPFKLLVRALSSTAVQT 68
Query: 56 IDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK 115
T++ VKPQWKAAIDFKWIRDNK+AV+ NI+NRNSNANLELVLELYEKML VQK
Sbjct: 69 APITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQK 128
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
EV+RLR ERNAVANKMKGKLE SERQKLIEEGKNLKEGL TLEEDLVKLTDELQ EAQCI
Sbjct: 129 EVERLRAERNAVANKMKGKLEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQCI 188
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
PN+THP VP+GGED S +RK G P F FPVKDH QLGK LD+FDFDAAAEVSGSKFYY
Sbjct: 189 PNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVKDHLQLGKELDLFDFDAAAEVSGSKFYY 248
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
LKNEAVMLEM L+NWTLSEV+K+GFTPLTTPE+VRSSVVEKCGFQPRG NTQVYSIEG+D
Sbjct: 249 LKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGSD 308
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
QCLIGTAEIPVGGIHMD+IL+E+ LPLKY A+SHCFRTEAGAAGTATRGLYRVHQF+K+E
Sbjct: 309 QCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKVE 368
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
MFV C+PEESDSYHEELI+IEEDL+S+LGLH+K L
Sbjct: 369 MFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTL 403
>gi|224063277|ref|XP_002301073.1| predicted protein [Populus trichocarpa]
gi|222842799|gb|EEE80346.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/395 (77%), Positives = 346/395 (87%), Gaps = 8/395 (2%)
Query: 1 MQTVKLAAIPAAFSSSCFMFRPVTKTLGL--ISRRNH---SQKPPFRLLARAFSAPALQT 55
+QT+KLAAIPA SS F+ +P++KTL L SR N+ Q+ PF+LL RA SA A+QT
Sbjct: 12 IQTLKLAAIPA---SSRFILKPISKTLVLNPFSRHNYVICPQRNPFKLLVRALSATAVQT 68
Query: 56 IDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK 115
T++ VKPQWKAAIDFKWIRDNK+AV+ NI+NRNSNANLELVLELYEKML VQK
Sbjct: 69 APITESLDNKVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQK 128
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
EV+RLR ERNAVANKMKGK+E SERQKLIEEGKNLKEGL TLEEDLVKLTDELQ EAQCI
Sbjct: 129 EVERLRAERNAVANKMKGKVEISERQKLIEEGKNLKEGLATLEEDLVKLTDELQLEAQCI 188
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
PN+THP VP+GGED S +RK G P F FPV+DH QLGK LD+FDFDAAAEVSGSKFYY
Sbjct: 189 PNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVRDHLQLGKELDLFDFDAAAEVSGSKFYY 248
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
LKNEAVMLEM L+NWTLSEV+K+GFTPLTTPE+VRSSVVEKCGFQPRG NTQVYSIEG+D
Sbjct: 249 LKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQVYSIEGSD 308
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
QCLIGTAEIPVGGIHMD+IL+E+ LPLKY A+SHCFRTEAGAAGTATRGLYRVHQF+K+E
Sbjct: 309 QCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYRVHQFTKVE 368
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
MFV C+PEESDSYHEELI+IEEDL+S+LGLH+K L
Sbjct: 369 MFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTL 403
>gi|449437300|ref|XP_004136430.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 539
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 304/393 (77%), Positives = 340/393 (86%), Gaps = 5/393 (1%)
Query: 2 QTVKLAAIPAAFSSSCFMFRPVTKTLGLISRRN--HSQKPPFRLLARAFSAPALQTIDTT 59
QT+KL A PA+ S+S M P TKT L S + +PP RLL RAFS P+++
Sbjct: 28 QTLKLPAFPAS-STSRLMVLPPTKTPSLTSLHPCVRTHRPPSRLLVRAFSLPSVEFDHPP 86
Query: 60 DNKGG--VAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV 117
G VKPQWKA+IDFKWIRDNK+ V++NI+NR S ANLELVL+LY+KMLN+QKEV
Sbjct: 87 STIAGEEKVVKPQWKASIDFKWIRDNKDLVASNIQNRKSGANLELVLQLYDKMLNLQKEV 146
Query: 118 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++LR ERN VANKMKGKLEPSERQKLIEEGKNLKEGLV+LEE+L+KLTD+LQQEAQCIPN
Sbjct: 147 EQLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPN 206
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
THPDVP+GGEDCSIIRK VG+P F+FPVKDH +LGK LDIFDFDAAAEVSGSKFYYLK
Sbjct: 207 TTHPDVPIGGEDCSIIRKMVGSPREFSFPVKDHLELGKQLDIFDFDAAAEVSGSKFYYLK 266
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 297
N AV LE+GLINWTLSEV+KRGFTPL TPEIVRS+VVEKCGFQPRG NTQVYSIEG+DQC
Sbjct: 267 NAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIEGSDQC 326
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
LIGTAEIPVGGIHMDSILSES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF
Sbjct: 327 LIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMF 386
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+FC+PEES+SYHEELIRIEEDL+SSLGLHFK L
Sbjct: 387 IFCRPEESESYHEELIRIEEDLFSSLGLHFKTL 419
>gi|356508070|ref|XP_003522784.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 506
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 328/393 (83%), Gaps = 10/393 (2%)
Query: 3 TVKLAAIPAAFSSSCFMFRPVTKTLGLISRRNHSQKPPFRLLARAFSAPALQTIDTTDNK 62
T+KLA++P FSS F+F+ T TL QK P RA S+ AL TT
Sbjct: 8 TLKLASVPN-FSSPTFLFK--TPTLRF-------QKSPLSRPIRALSSSALVQTSTTKAT 57
Query: 63 GGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLRE 122
VKPQWKA IDFKWI+DNKEAV+AN++NRNS+A+L LVL LY+KM +QKEV+R+R
Sbjct: 58 EDQGVKPQWKATIDFKWIKDNKEAVAANLKNRNSDADLNLVLHLYDKMFTLQKEVERVRG 117
Query: 123 ERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
ERNAVANKMKGKLE SERQ+LIEEGKNLKEGL LEEDL KL DELQQEAQCIPNMTHPD
Sbjct: 118 ERNAVANKMKGKLEQSERQRLIEEGKNLKEGLAALEEDLAKLNDELQQEAQCIPNMTHPD 177
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VP+GGEDCS IRK VG+ F+FPVKDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+
Sbjct: 178 VPIGGEDCSTIRKMVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVL 237
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
LEM L+NWTLSEV+KRGFTPLTTPE+VRSSVVEKCGFQPR NTQ+YSI +DQCLIGTA
Sbjct: 238 LEMALVNWTLSEVMKRGFTPLTTPELVRSSVVEKCGFQPRANNTQIYSIADSDQCLIGTA 297
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EIPVGG+HMDSILS+SLLPLKY AFSHCFRTEAGAAGTATRGLYRVHQFSK+EMF+FC+P
Sbjct: 298 EIPVGGLHMDSILSDSLLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFIFCRP 357
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
EES+ YH+ELI IEEDL+SSLGLHFK L +E
Sbjct: 358 EESEHYHQELITIEEDLFSSLGLHFKTLDMASE 390
>gi|255545800|ref|XP_002513960.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223547046|gb|EEF48543.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 517
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 307/397 (77%), Positives = 347/397 (87%), Gaps = 12/397 (3%)
Query: 6 LAAIPAAFSSSCFMF---RPVTKTLGL--ISRR------NHSQKPPFRLLARAFSA-PAL 53
+AAIPA+FSSS F +PV+KTL L ISRR ++S++P F L+ RA SA A+
Sbjct: 1 MAAIPASFSSSSSRFIFMKPVSKTLNLNPISRRFINNKVSYSERPFFTLITRALSATAAV 60
Query: 54 QTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNV 113
Q TT++ VKPQWKA+IDFKWIRDNKE V+ NI+NRNSNANLELVLELYEKML V
Sbjct: 61 QEPLTTESVDSKVVKPQWKASIDFKWIRDNKEEVALNIKNRNSNANLELVLELYEKMLAV 120
Query: 114 QKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQ 173
QKEV+RLR ERNAVANKMKGKLEPSER KLI+EGKNLKEGL+TLEED++KLTDELQQEAQ
Sbjct: 121 QKEVERLRGERNAVANKMKGKLEPSERSKLIDEGKNLKEGLMTLEEDMLKLTDELQQEAQ 180
Query: 174 CIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKF 233
CIPNMTHP VP+G EDCS +RK VG+P F+FPVKDH QLGK LD+FDFDAAAEVSGSKF
Sbjct: 181 CIPNMTHPAVPIGVEDCSTVRKMVGSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKF 240
Query: 234 YYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEG 293
YYLKNEAVMLEM L+NWTLSEV+KRGFTPLTTPE+VR+SVVEKCGFQPRG NTQVYSIEG
Sbjct: 241 YYLKNEAVMLEMALVNWTLSEVMKRGFTPLTTPELVRASVVEKCGFQPRGDNTQVYSIEG 300
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
+DQCLIGTAEIPVGGIHM+SIL+ S+LPLKY AFSHCFRTEAGAAGTATRGLYRVHQFSK
Sbjct: 301 SDQCLIGTAEIPVGGIHMESILTASMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSK 360
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+EMF+ C EES+S+HEELI+IEEDL+SSLGLHFK +
Sbjct: 361 VEMFILCPAEESESHHEELIKIEEDLFSSLGLHFKTI 397
>gi|449497050|ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
Length = 563
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/373 (78%), Positives = 326/373 (87%), Gaps = 4/373 (1%)
Query: 22 PVTKTLGLISRRN--HSQKPPFRLLARAFSAPALQTIDTTDNKGG--VAVKPQWKAAIDF 77
P TKT L S + +PP RLL RAFS P+++ G VKPQWKA+IDF
Sbjct: 71 PPTKTPSLTSLHPCVRTHRPPSRLLVRAFSLPSVEFDHPPSTIAGEEKVVKPQWKASIDF 130
Query: 78 KWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEP 137
KWIRDNK+ V++NI+NR S ANLELVL+LY+KMLN+QKEV++LR ERN VANKMKGKLEP
Sbjct: 131 KWIRDNKDLVASNIQNRKSGANLELVLQLYDKMLNLQKEVEQLRAERNMVANKMKGKLEP 190
Query: 138 SERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTV 197
SERQKLIEEGKNLKEGLV+LEE+L+KLTD+LQQEAQCIPN THPDVP+GGEDCSIIRK V
Sbjct: 191 SERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNTTHPDVPIGGEDCSIIRKMV 250
Query: 198 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIK 257
G+P F+FPVKDH +LGK LDIFDFDA AEVSGSKFYYLKN AV LE+GLINWTLSEV+K
Sbjct: 251 GSPREFSFPVKDHLELGKQLDIFDFDAVAEVSGSKFYYLKNAAVTLELGLINWTLSEVMK 310
Query: 258 RGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSE 317
RGFTPL TPEIVRS+VVEKCGFQPRG NTQVYSIEG+DQCLIGTAEIPVGGIHMDSILSE
Sbjct: 311 RGFTPLITPEIVRSTVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILSE 370
Query: 318 SLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEE 377
S LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEES+SYHEELIRIEE
Sbjct: 371 SSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEE 430
Query: 378 DLYSSLGLHFKLL 390
DL+SSLGLHFK L
Sbjct: 431 DLFSSLGLHFKTL 443
>gi|357465105|ref|XP_003602834.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491882|gb|AES73085.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 546
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/402 (72%), Positives = 333/402 (82%), Gaps = 21/402 (5%)
Query: 1 MQTVKLAAIPAAFSSSCFMFRPVTKTLGLISRRNHSQKPPF-RLLARAFS--APALQTID 57
QT+KL++ P SSS F+ + KT K PF RL +A S + A+QT
Sbjct: 45 FQTLKLSSTPTC-SSSRFLSPSLHKT----------HKFPFPRLTTKALSTSSAAVQTSP 93
Query: 58 TT----DNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNV 113
TT D++GG K QWKA IDFKWI+DNKE V+ NI+NRNS+ANLE +L LY+K+ +
Sbjct: 94 TTTTISDDQGG---KHQWKATIDFKWIKDNKETVAVNIKNRNSDANLEFILHLYDKLFIL 150
Query: 114 QKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQ 173
QKEV+R+R ERNAVANKMKGKLEPSERQ LIE+GKNLKEGL LEEDL KL DELQ+EAQ
Sbjct: 151 QKEVERVRGERNAVANKMKGKLEPSERQTLIEQGKNLKEGLTALEEDLAKLNDELQREAQ 210
Query: 174 CIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKF 233
CIPNMTHPDVP+GGED S IRKTVG+ F+FPVKDH QLGK LD+FDFDAAAEVSGSKF
Sbjct: 211 CIPNMTHPDVPIGGEDSSTIRKTVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKF 270
Query: 234 YYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEG 293
YYLKNEAV+LEM L+NWTLSEV+KRGFTPLTTPEIVRSSVVEKCGFQPR NTQVYSI+
Sbjct: 271 YYLKNEAVLLEMALLNWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQVYSIDD 330
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
+DQCLIGTAEIPVGG+HMDSIL+ES+LPLKY AFSHCFRTEAGAAGTATRGLYRVHQFSK
Sbjct: 331 SDQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSK 390
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
+EMF+FC+PEESD YHEELI+IEED++SSLGLHFK L +E
Sbjct: 391 IEMFIFCRPEESDYYHEELIKIEEDMFSSLGLHFKTLDMASE 432
>gi|42571443|ref|NP_973812.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190685|gb|AEE28806.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 402
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/390 (74%), Positives = 327/390 (83%), Gaps = 17/390 (4%)
Query: 7 AAIPAAFSSSCFMFRPVTKTL--GLISRRNHSQKPPFRLLARAFSA-------PALQTID 57
AA+P FSS F+ +P T TL GL SR + P LL RAFSA PA QT D
Sbjct: 10 AAVPVTFSSRLFL-KPFTNTLTLGLFSRHLQPRNKP--LLVRAFSASAAVQDIPATQTSD 66
Query: 58 TTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV 117
++ VA +P WKAAIDFKWIRDNKEAV NIRNRNSNANLE VL+LYE M+N+QKEV
Sbjct: 67 SS-----VAARPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEV 121
Query: 118 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+RLREERN VA KMKGKLEPSER++L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPN
Sbjct: 122 ERLREERNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPN 181
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
MTHPDVPVGGED S IR+ VG+P F+FP+KDH QLGK LD+ DFD+AAEVSGSKF+YLK
Sbjct: 182 MTHPDVPVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLK 241
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 297
NEAV+LEM L+NWTLS+V+K+G+TPLTTPEIVRSS+VEKCGFQPRG NTQVYSI+G DQC
Sbjct: 242 NEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQC 301
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
LIGTAEIPVGGIHMDSIL ES LPLKY AFSHCFRTEAGAAG AT+GLYRVHQFSK EMF
Sbjct: 302 LIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMF 361
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHF 387
V CQPE+S+S+H+ELI+IEEDL++SLGLHF
Sbjct: 362 VICQPEDSESFHQELIQIEEDLFTSLGLHF 391
>gi|30682484|ref|NP_849647.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|20268723|gb|AAM14065.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|21689901|gb|AAM67511.1| putative seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190684|gb|AEE28805.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 514
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/393 (74%), Positives = 329/393 (83%), Gaps = 17/393 (4%)
Query: 7 AAIPAAFSSSCFMFRPVTKTL--GLISRRNHSQKPPFRLLARAFSA-------PALQTID 57
AA+P FSS F+ +P T TL GL SR + P LL RAFSA PA QT D
Sbjct: 10 AAVPVTFSSRLFL-KPFTNTLTLGLFSRHLQPRNKP--LLVRAFSASAAVQDIPATQTSD 66
Query: 58 TTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV 117
++ VA +P WKAAIDFKWIRDNKEAV NIRNRNSNANLE VL+LYE M+N+QKEV
Sbjct: 67 SS-----VAARPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEV 121
Query: 118 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+RLREERN VA KMKGKLEPSER++L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPN
Sbjct: 122 ERLREERNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPN 181
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
MTHPDVPVGGED S IR+ VG+P F+FP+KDH QLGK LD+ DFD+AAEVSGSKF+YLK
Sbjct: 182 MTHPDVPVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLK 241
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 297
NEAV+LEM L+NWTLS+V+K+G+TPLTTPEIVRSS+VEKCGFQPRG NTQVYSI+G DQC
Sbjct: 242 NEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQC 301
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
LIGTAEIPVGGIHMDSIL ES LPLKY AFSHCFRTEAGAAG AT+GLYRVHQFSK EMF
Sbjct: 302 LIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMF 361
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V CQPE+S+S+H+ELI+IEEDL++SLGLHFK L
Sbjct: 362 VICQPEDSESFHQELIQIEEDLFTSLGLHFKTL 394
>gi|297844038|ref|XP_002889900.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
gi|297335742|gb|EFH66159.1| hypothetical protein ARALYDRAFT_471334 [Arabidopsis lyrata subsp.
lyrata]
Length = 511
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/393 (73%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 1 MQTVKLAAIPAAFSSSCFMFRPV--TKTLGLISRRNHSQKPPFRLLARAFSAPA-LQTID 57
+ ++LAA+P FSS F +P T TLGL SR KP LL RAFSA A ++ I
Sbjct: 3 LHKLRLAAVPITFSSRLFFLKPFPNTLTLGLFSRHLQPHKP---LLVRAFSASAAVEDIP 59
Query: 58 TTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV 117
T A +PQWKAAIDFKWIRDNKEAV NI+NRNSNANLE VLELYE M+N+QKEV
Sbjct: 60 ATQASDSSA-RPQWKAAIDFKWIRDNKEAVEINIKNRNSNANLEAVLELYENMVNLQKEV 118
Query: 118 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++LREERN VA KMKGKLEPS+R+ L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPN
Sbjct: 119 EQLREERNNVAKKMKGKLEPSQRETLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPN 178
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
MTHPDVPVGGED S IRK VG+P F+FP+KDH QLGK LD+ DFD+AAEVSGSKF+YLK
Sbjct: 179 MTHPDVPVGGEDSSAIRKEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLK 238
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 297
NEAV+LEM L+NWTLS+V+K+GFTPLTTPEIVRS++VEKCGFQPRG NTQVYSI+G DQC
Sbjct: 239 NEAVLLEMALLNWTLSQVMKQGFTPLTTPEIVRSAIVEKCGFQPRGDNTQVYSIDGTDQC 298
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
LIGTAEIPVGGIHMDSIL ES+LPLKY AFSHCFRTEAGAAG AT+GLYRVHQF+K EMF
Sbjct: 299 LIGTAEIPVGGIHMDSILLESVLPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFNKAEMF 358
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V C+PE+S+S+H+ELI+IEEDL++SLGLHFK L
Sbjct: 359 VICRPEDSESFHQELIQIEEDLFTSLGLHFKTL 391
>gi|15221121|ref|NP_172651.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
gi|332190686|gb|AEE28807.1| Seryl-tRNA synthetase [Arabidopsis thaliana]
Length = 512
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/387 (74%), Positives = 326/387 (84%), Gaps = 7/387 (1%)
Query: 7 AAIPAAFSSSCFMFRPVTKTL--GLISRRNHSQKPPFRLLARAFSAPA-LQTIDTTDNKG 63
AA+P FSS F+ +P T TL GL SR + P LL RAFSA A +Q I T
Sbjct: 10 AAVPVTFSSRLFL-KPFTNTLTLGLFSRHLQPRNKP--LLVRAFSASAAVQDIPATQTSD 66
Query: 64 GVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREE 123
A +P WKAAIDFKWIRDNKEAV NIRNRNSNANLE VL+LYE M+N+QKEV+RLREE
Sbjct: 67 SSA-RPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREE 125
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
RN VA KMKGKLEPSER++L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPNMTHPDV
Sbjct: 126 RNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDV 185
Query: 184 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
PVGGED S IR+ VG+P F+FP+KDH QLGK LD+ DFD+AAEVSGSKF+YLKNEAV+L
Sbjct: 186 PVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLL 245
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
EM L+NWTLS+V+K+G+TPLTTPEIVRSS+VEKCGFQPRG NTQVYSI+G DQCLIGTAE
Sbjct: 246 EMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAE 305
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
IPVGGIHMDSIL ES LPLKY AFSHCFRTEAGAAG AT+GLYRVHQFSK EMFV CQPE
Sbjct: 306 IPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPE 365
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S+S+H+ELI+IEEDL++SLGLHFK L
Sbjct: 366 DSESFHQELIQIEEDLFTSLGLHFKTL 392
>gi|16226853|gb|AAL16281.1|AF428351_1 At1g11870/F12F1_29 [Arabidopsis thaliana]
Length = 512
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/387 (74%), Positives = 326/387 (84%), Gaps = 7/387 (1%)
Query: 7 AAIPAAFSSSCFMFRPVTKTL--GLISRRNHSQKPPFRLLARAFSAPA-LQTIDTTDNKG 63
AA+P FSS F+ +P T TL GL SR + P LL RAFSA A +Q I T
Sbjct: 10 AAVPVTFSSRLFL-KPFTNTLTLGLFSRHLQPRNKP--LLVRAFSASAAVQDIPATQTSD 66
Query: 64 GVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREE 123
A +P WKAAIDFKWIRDNKEAV NIRNRNSNANLE VL+LYE M+N+QKEV+RLREE
Sbjct: 67 SSA-RPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREE 125
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
RN VA KMKGKLEPSER++L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPNMTHPDV
Sbjct: 126 RNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDV 185
Query: 184 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
PVGGED S IR+ VG+P F+FP+KDH QLGK LD+ DFD+AAEVSGSKF+YLKNEAV+L
Sbjct: 186 PVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLL 245
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
EM L+NWTLS+V+K+G+TPLTTPEIVRSS+VEKCGFQPRG NTQVYSI+G DQCLIGTAE
Sbjct: 246 EMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGTAE 305
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
IPVGGIHMDSIL ES LPLKY AFSHCFRTEAGAAG AT+GLYRVHQFSK EMFV CQPE
Sbjct: 306 IPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPE 365
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S+S+H+ELI+IEEDL++SLGLHFK L
Sbjct: 366 DSESFHQELIQIEEDLFTSLGLHFKTL 392
>gi|3157938|gb|AAC17621.1| Similar to seryl-tRNA synthetase gb|U10400 from S cerevisiae. EST
gb|N96627 comes from this gene [Arabidopsis thaliana]
Length = 573
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 290/408 (71%), Positives = 326/408 (79%), Gaps = 28/408 (6%)
Query: 7 AAIPAAFSSSCFMFRPVTKTL--GLISRRNHSQKPPFRLLARAFSAP-ALQTIDTTDNKG 63
AA+P FSS F+ +P T TL GL SR + P LL RAFSA A+Q I T
Sbjct: 10 AAVPVTFSSRLFL-KPFTNTLTLGLFSRHLQPRNKP--LLVRAFSASAAVQDIPATQTSD 66
Query: 64 GVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREE 123
A +P WKAAIDFKWIRDNKEAV NIRNRNSNANLE VL+LYE M+N+QKEV+RLREE
Sbjct: 67 SSA-RPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLREE 125
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
RN VA KMKGKLEPSER++L+EEGKNLKE LVTLEEDLVKL DELQ AQ IPNMTHPDV
Sbjct: 126 RNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDV 185
Query: 184 PVGGEDCSIIRK---------------------TVGNPSVFNFPVKDHFQLGKALDIFDF 222
PVGGED S IR+ VG+P F+FP+KDH QLGK LD+ DF
Sbjct: 186 PVGGEDSSAIRQEVSYFCQNSLNSCVDEGILLSKVGSPREFSFPIKDHLQLGKDLDLIDF 245
Query: 223 DAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR 282
D+AAEVSGSKF+YLKNEAV+LEM L+NWTLS+V+K+G+TPLTTPEIVRSS+VEKCGFQPR
Sbjct: 246 DSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPR 305
Query: 283 GANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTAT 342
G NTQVYSI+G DQCLIGTAEIPVGGIHMDSIL ES LPLKY AFSHCFRTEAGAAG AT
Sbjct: 306 GDNTQVYSIDGTDQCLIGTAEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAAT 365
Query: 343 RGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+GLYRVHQFSK EMFV CQPE+S+S+H+ELI+IEEDL++SLGLHFK L
Sbjct: 366 KGLYRVHQFSKAEMFVICQPEDSESFHQELIQIEEDLFTSLGLHFKTL 413
>gi|242069129|ref|XP_002449841.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
gi|241935684|gb|EES08829.1| hypothetical protein SORBIDRAFT_05g024270 [Sorghum bicolor]
Length = 514
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/324 (79%), Positives = 291/324 (89%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
V+PQWKAAIDFKWIRDN++AV+ NIR+RNS ANL+LVLELY++ L +QKEV+RLR ERNA
Sbjct: 68 VRPQWKAAIDFKWIRDNRDAVADNIRSRNSTANLDLVLELYDQYLALQKEVERLRAERNA 127
Query: 127 VANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
VANKMKGKL+PS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPDVPVG
Sbjct: 128 VANKMKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVG 187
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
GE+ S++RK VG+ FNF +KDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM
Sbjct: 188 GEESSVLRKEVGSQRSFNFTIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMA 247
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+NW +SEV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSIE +DQCLIGTAEIPV
Sbjct: 248 LVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIEDSDQCLIGTAEIPV 307
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GGIHMDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+P+ESD
Sbjct: 308 GGIHMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPDESD 367
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
HEELI IEEDLY+SLGLHFK L
Sbjct: 368 KLHEELITIEEDLYASLGLHFKTL 391
>gi|195625240|gb|ACG34450.1| seryl-tRNA synthetase [Zea mays]
gi|413920455|gb|AFW60387.1| seryl-tRNA synthetase [Zea mays]
Length = 512
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/324 (79%), Positives = 289/324 (89%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
V+PQWKAAIDFKWIRDN++AV+ NIR RNS ANL+LV ELY++ L +QKEV+RLR ERNA
Sbjct: 66 VRPQWKAAIDFKWIRDNRDAVADNIRTRNSTANLDLVFELYDQYLTLQKEVERLRAERNA 125
Query: 127 VANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
VANKMKGKL+PS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPDVPVG
Sbjct: 126 VANKMKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVG 185
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
GE+ S++RK VG+ FNF +KDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM
Sbjct: 186 GEESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMA 245
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+NW +SEV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSIE +DQCLIGTAEIPV
Sbjct: 246 LVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQVYSIEDSDQCLIGTAEIPV 305
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GGIHMDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEES
Sbjct: 306 GGIHMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESG 365
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+HEELI IEEDLY+SLGLHFK L
Sbjct: 366 KWHEELITIEEDLYASLGLHFKTL 389
>gi|413920454|gb|AFW60386.1| hypothetical protein ZEAMMB73_399106 [Zea mays]
Length = 511
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/368 (72%), Positives = 302/368 (82%), Gaps = 17/368 (4%)
Query: 40 PFRLLARAF---SAP--------------ALQTIDTTDNKGGVAVKPQWKAAIDFKWIRD 82
PFR L R+ AP L T D + G V+PQWKAAIDFKWIRD
Sbjct: 21 PFRTLTRSLVRRPAPHLLSSASAAAATAVELDTNDGSAGGGAGVVRPQWKAAIDFKWIRD 80
Query: 83 NKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQK 142
N++AV+ NIR RNS ANL+LV ELY++ L +QKEV+RLR ERNAVANKMKGKL+PS RQ
Sbjct: 81 NRDAVADNIRTRNSTANLDLVFELYDQYLTLQKEVERLRAERNAVANKMKGKLDPSVRQA 140
Query: 143 LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSV 202
L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPDVPVGGE+ S++RK VG+
Sbjct: 141 LVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEESSVLRKEVGSQRS 200
Query: 203 FNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
FNF +KDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM L+NW +SEV K+GFTP
Sbjct: 201 FNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNWAISEVSKKGFTP 260
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
L TPEIVRSSVVEKCGFQPR NTQVYSIE +DQCLIGTAEIPVGGIHMDSIL+ES LPL
Sbjct: 261 LITPEIVRSSVVEKCGFQPRAKNTQVYSIEDSDQCLIGTAEIPVGGIHMDSILAESALPL 320
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
KY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEES +HEELI IEEDLY+S
Sbjct: 321 KYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHEELITIEEDLYAS 380
Query: 383 LGLHFKLL 390
LGLHFK L
Sbjct: 381 LGLHFKTL 388
>gi|225466909|ref|XP_002269287.1| PREDICTED: seryl-tRNA synthetase-like [Vitis vinifera]
Length = 352
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/348 (76%), Positives = 297/348 (85%), Gaps = 14/348 (4%)
Query: 2 QTVKLAAIPAAFSSSCFMFRP-VTKTLGL---ISRRNHSQKPPF--RLLARAFSAPALQT 55
QT+KL IP F RP V++TL L + R N SQ+PPF + ARA SAP +Q
Sbjct: 13 QTLKLTTIPIPF-------RPLVSRTLTLNLLLYRHNCSQRPPFPFQARARAPSAPDVQA 65
Query: 56 IDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK 115
++ V VKPQWKAAI+FKWIRDNK V+ NI+NRNSNANLEL+LELYE++ N+QK
Sbjct: 66 SPVANSNDKV-VKPQWKAAINFKWIRDNKAVVANNIKNRNSNANLELILELYERVSNLQK 124
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
EV+RLR ERN VA+KMKGK+EPSERQKLIEEGKNLKEG++ LEEDL++LTDELQQEAQCI
Sbjct: 125 EVERLRGERNIVASKMKGKMEPSERQKLIEEGKNLKEGVMNLEEDLLRLTDELQQEAQCI 184
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
PNMTHPDVP+GGEDCS +RK VG+P F F +KDH QLGK LD+FDFDAAAEVSGSKFYY
Sbjct: 185 PNMTHPDVPIGGEDCSTLRKMVGSPRKFGFTIKDHLQLGKELDLFDFDAAAEVSGSKFYY 244
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
LKNEAVMLEM LINWTLSEV+KRGFTPLTTPEIVRSSVVEKCGFQPRG+NTQVYSIEG+D
Sbjct: 245 LKNEAVMLEMALINWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRGSNTQVYSIEGSD 304
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
QCLIGTAEIPVGGIHMDSIL+ESLLPLKY AFSHCFRTEAGAAGTATR
Sbjct: 305 QCLIGTAEIPVGGIHMDSILAESLLPLKYVAFSHCFRTEAGAAGTATR 352
>gi|296084761|emb|CBI14794.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/347 (76%), Positives = 296/347 (85%), Gaps = 14/347 (4%)
Query: 2 QTVKLAAIPAAFSSSCFMFRP-VTKTLGL---ISRRNHSQKPPF--RLLARAFSAPALQT 55
QT+KL IP F RP V++TL L + R N SQ+PPF + ARA SAP +Q
Sbjct: 13 QTLKLTTIPIPF-------RPLVSRTLTLNLLLYRHNCSQRPPFPFQARARAPSAPDVQA 65
Query: 56 IDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK 115
++ V VKPQWKAAI+FKWIRDNK V+ NI+NRNSNANLEL+LELYE++ N+QK
Sbjct: 66 SPVANSNDKV-VKPQWKAAINFKWIRDNKAVVANNIKNRNSNANLELILELYERVSNLQK 124
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
EV+RLR ERN VA+KMKGK+EPSERQKLIEEGKNLKEG++ LEEDL++LTDELQQEAQCI
Sbjct: 125 EVERLRGERNIVASKMKGKMEPSERQKLIEEGKNLKEGVMNLEEDLLRLTDELQQEAQCI 184
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
PNMTHPDVP+GGEDCS +RK VG+P F F +KDH QLGK LD+FDFDAAAEVSGSKFYY
Sbjct: 185 PNMTHPDVPIGGEDCSTLRKMVGSPRKFGFTIKDHLQLGKELDLFDFDAAAEVSGSKFYY 244
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
LKNEAVMLEM LINWTLSEV+KRGFTPLTTPEIVRSSVVEKCGFQPRG+NTQVYSIEG+D
Sbjct: 245 LKNEAVMLEMALINWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRGSNTQVYSIEGSD 304
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTAT 342
QCLIGTAEIPVGGIHMDSIL+ESLLPLKY AFSHCFRTEAGAAGTAT
Sbjct: 305 QCLIGTAEIPVGGIHMDSILAESLLPLKYVAFSHCFRTEAGAAGTAT 351
>gi|3355717|emb|CAA73496.1| seryl-tRNA synthetase [Zea mays]
Length = 489
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/324 (78%), Positives = 287/324 (88%), Gaps = 1/324 (0%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
V+PQWKAAIDFKWIRDN++AV+ NIR RNS ANL+LV ELY++ L +QKEV+RLR ERNA
Sbjct: 44 VRPQWKAAIDFKWIRDNRDAVADNIRTRNSTANLDLVFELYDQYLTLQKEVERLRAERNA 103
Query: 127 VANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
VANKMKGKL+PS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPDVPVG
Sbjct: 104 VANKMKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVG 163
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
GE+ S++RK VG+ FNF +KDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM
Sbjct: 164 GEESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMA 223
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+ W +SEV K+GFTPL TPEIVRSSVVEKCGF +G NTQVYSIE +DQCLIGTAEIPV
Sbjct: 224 LVIWAISEVSKKGFTPLITPEIVRSSVVEKCGFS-KGKNTQVYSIEDSDQCLIGTAEIPV 282
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GGIHMDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEES
Sbjct: 283 GGIHMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESG 342
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+HEELI IEEDLY+SLGLHFK L
Sbjct: 343 KWHEELITIEEDLYASLGLHFKTL 366
>gi|357156188|ref|XP_003577370.1| PREDICTED: seryl-tRNA synthetase-like [Brachypodium distachyon]
Length = 517
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/324 (77%), Positives = 286/324 (88%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
++PQWKAAIDFKWIRDNKE V+ NI NRNS ANL++VL+LY++ L +QKEV+RLR ERNA
Sbjct: 67 LRPQWKAAIDFKWIRDNKETVATNILNRNSVANLDVVLQLYDQYLALQKEVERLRAERNA 126
Query: 127 VANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
VANKMKGKLEPS RQ +EEGKNLKE L+ LEEDLV+LTD+LQ EAQ IPN THPDVPVG
Sbjct: 127 VANKMKGKLEPSVRQAFVEEGKNLKESLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVG 186
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
GE+ S+IRK VG+ F+F +KDH QLGK LD+FDFDAA+EVSGSKFYYLKN AV+LEM
Sbjct: 187 GEENSVIRKEVGSQRNFDFTIKDHLQLGKDLDLFDFDAASEVSGSKFYYLKNAAVLLEMA 246
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+NW ++EV K+GFTPL TPEIVRSSVVE+CGFQPR NTQVYSI+ +DQCLIGTAEIPV
Sbjct: 247 LVNWAIAEVSKKGFTPLITPEIVRSSVVERCGFQPRAQNTQVYSIDNSDQCLIGTAEIPV 306
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GGIHM+SIL +S LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEESD
Sbjct: 307 GGIHMNSILLDSDLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESD 366
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
YHEELI IEEDLY+SLGLHFK L
Sbjct: 367 KYHEELITIEEDLYASLGLHFKTL 390
>gi|148907095|gb|ABR16691.1| unknown [Picea sitchensis]
Length = 542
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/399 (64%), Positives = 307/399 (76%), Gaps = 13/399 (3%)
Query: 2 QTVKLAAIPAAFSS--SCFMFRPVTKTLGLISRRNHSQKPPFRLLARAFSAPALQTIDTT 59
Q + ++P SS SC + P G S P R R + A+ ++DT
Sbjct: 24 QLLPCRSLPFCSSSVLSCRTWVPCRGWNGTTQLVKISHNSPKR---RLYICRAVASVDTQ 80
Query: 60 DN--------KGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKML 111
KG + WKA+IDFKWIRDNKEAV+ N RNR S AN+ELV+ELYE++
Sbjct: 81 QGPTPAKEEIKGDGQSRSLWKASIDFKWIRDNKEAVALNARNRKSVANVELVVELYEQLC 140
Query: 112 NVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE 171
N+Q EV+ LR ERN VAN+MK KL+PSER+KLI EGK+LK+ LV LEEDL +LTD+LQ+E
Sbjct: 141 NLQTEVESLRAERNVVANRMKQKLDPSEREKLIAEGKHLKDNLVALEEDLAQLTDKLQRE 200
Query: 172 AQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
AQ IPN THPDVP+GGED + +RK VG F+FPVKDH LG+ LD+FDFDAAAEVSG+
Sbjct: 201 AQSIPNSTHPDVPIGGEDAASLRKMVGTKCEFDFPVKDHVDLGQELDLFDFDAAAEVSGT 260
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI 291
KFYYLKNEAV+LE+GLINW LSE++KRG+TPL+TP+IVRSSV+EKCGFQPR NTQVYSI
Sbjct: 261 KFYYLKNEAVLLEIGLINWALSELVKRGYTPLSTPDIVRSSVLEKCGFQPRALNTQVYSI 320
Query: 292 EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQF 351
EG DQCL GTAEIPVGG++MD I+ +SLLPLK+ AFSHCFRTEAGAAG ATRGLYRVHQF
Sbjct: 321 EGTDQCLAGTAEIPVGGMYMDQIIDDSLLPLKFVAFSHCFRTEAGAAGYATRGLYRVHQF 380
Query: 352 SKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
SK+EMF+ C+PE+SDS+HEELI IEE L+SSLGLHFK L
Sbjct: 381 SKVEMFIICRPEDSDSFHEELISIEESLFSSLGLHFKTL 419
>gi|326529173|dbj|BAK00980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/324 (75%), Positives = 284/324 (87%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
+PQWKAAIDFKWIRDN++ V+ NIRNRNS ANL++VL+LY++ L +QKEV+RLR ERNA
Sbjct: 63 TRPQWKAAIDFKWIRDNRDVVATNIRNRNSAANLDVVLQLYDQYLALQKEVERLRAERNA 122
Query: 127 VANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
VANKMKGKL+PS R L++EGKNLKE L+ LEEDLV LTD+LQ EAQ IPN THPDVP+G
Sbjct: 123 VANKMKGKLDPSLRHALVDEGKNLKEILIALEEDLVHLTDKLQLEAQSIPNTTHPDVPLG 182
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
E+ S+ RK VG+ F+F +KDH QLGK LD+FDFDAA+EVSGSKFYYLKNEAV+LEM
Sbjct: 183 DEESSVTRKEVGSQRNFSFTIKDHLQLGKDLDLFDFDAASEVSGSKFYYLKNEAVLLEMA 242
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+NW ++EV K+GFTPL TPEIVRSSVVE+CGFQPR NTQVYSI+ +DQCLIGTAEIPV
Sbjct: 243 LVNWGIAEVSKKGFTPLITPEIVRSSVVERCGFQPRAQNTQVYSIDNSDQCLIGTAEIPV 302
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GGIH++SIL +S LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEESD
Sbjct: 303 GGIHINSILPDSDLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESD 362
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
YHEELI IEE+LY+SLGLHFK L
Sbjct: 363 KYHEELITIEENLYASLGLHFKTL 386
>gi|115486243|ref|NP_001068265.1| Os11g0610900 [Oryza sativa Japonica Group]
gi|108864576|gb|ABA94784.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
Japonica Group]
gi|113645487|dbj|BAF28628.1| Os11g0610900 [Oryza sativa Japonica Group]
Length = 509
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/334 (77%), Positives = 292/334 (87%)
Query: 57 DTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKE 116
DT GG A KPQWKAAIDFKWIR+N +AV+ANIR+RNS ANL+LVL+LY++ L +QKE
Sbjct: 54 DTKGGAGGGAAKPQWKAAIDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKE 113
Query: 117 VDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIP 176
V+RLR ERNAVANKMKGKLEPS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IP
Sbjct: 114 VERLRAERNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIP 173
Query: 177 NMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
N THPD PVGGE+ S++RK VG+ FNF ++DH QLGK LD+FDFDAAAEVSGSKFYYL
Sbjct: 174 NTTHPDAPVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYL 233
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
KNEAV+LEM L+NW ++EV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSI+ +DQ
Sbjct: 234 KNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQ 293
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
CLIGTAEIPVGGIHMDSIL +S LP KY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EM
Sbjct: 294 CLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEM 353
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
FVFC+PEESD HEELI IEE+LY+SLGLHFK L
Sbjct: 354 FVFCRPEESDKCHEELITIEEELYASLGLHFKTL 387
>gi|222640339|gb|EEE68471.1| hypothetical protein OsJ_26871 [Oryza sativa Japonica Group]
Length = 527
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/352 (73%), Positives = 292/352 (82%), Gaps = 18/352 (5%)
Query: 57 DTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKE 116
DT GG A KPQWKAAIDFKWIR+N +AV+ANIR+RNS ANL+LVL+LY++ L +QKE
Sbjct: 54 DTKGGAGGGAAKPQWKAAIDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKE 113
Query: 117 VDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIP 176
V+RLR ERNAVANKMKGKLEPS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IP
Sbjct: 114 VERLRAERNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIP 173
Query: 177 NMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
N THPD PVGGE+ S++RK VG+ FNF ++DH QLGK LD+FDFDAAAEVSGSKFYYL
Sbjct: 174 NTTHPDAPVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYL 233
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ--------- 287
KNEAV+LEM L+NW ++EV K+GFTPL TPEIVRSSVVEKCGFQPR NTQ
Sbjct: 234 KNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQLLELVVLGG 293
Query: 288 ---------VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAA 338
VYSI+ +DQCLIGTAEIPVGGIHMDSIL +S LP KY A+SHCFRTEAGAA
Sbjct: 294 SYAHNFKKKVYSIDNSDQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAA 353
Query: 339 GTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
G ATRGLYRVHQFSK+EMFVFC+PEESD HEELI IEE+LY+SLGLHFK L
Sbjct: 354 GAATRGLYRVHQFSKVEMFVFCRPEESDKCHEELITIEEELYASLGLHFKTL 405
>gi|255545812|ref|XP_002513966.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223547052|gb|EEF48549.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 380
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/306 (77%), Positives = 264/306 (86%), Gaps = 8/306 (2%)
Query: 29 LISRR------NHSQKPPFRLLARAFSA-PALQTIDTTDNKGGVAVKPQWKAAIDFKWIR 81
LISRR ++S++P F L+ RA SA A Q TT++ VKPQW AAIDFKWIR
Sbjct: 31 LISRRFIHNKVSYSKRPFFTLITRAPSATAAAQEPVTTESFNSKVVKPQWIAAIDFKWIR 90
Query: 82 DNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQ 141
DNKE V+ NI+NRNSNA LELVLELYEKML VQKEV+RLR ERNAVANKMKGKLEPSERQ
Sbjct: 91 DNKEEVALNIKNRNSNAKLELVLELYEKMLAVQKEVERLRGERNAVANKMKGKLEPSERQ 150
Query: 142 KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPS 201
KLI+EGKNLK GL+TLEED++K TDELQQEAQCIPNMTHP VP+G EDCS +RK VG+P
Sbjct: 151 KLIDEGKNLK-GLMTLEEDMLKHTDELQQEAQCIPNMTHPAVPIGVEDCSTVRKMVGSPH 209
Query: 202 VFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFT 261
F+FPVKDH QLGK LD+FDFDA AEVSGSKFYYLKNEAVMLEM LI+WTLSEV+KRGF
Sbjct: 210 EFSFPVKDHLQLGKELDLFDFDATAEVSGSKFYYLKNEAVMLEMALIDWTLSEVMKRGFI 269
Query: 262 PLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLP 321
PLTTPE+VR+SVVEKCGFQPRG NTQVYSIEG+DQCLIGTAEIPVGGIHM+SIL+ES+LP
Sbjct: 270 PLTTPELVRASVVEKCGFQPRGDNTQVYSIEGSDQCLIGTAEIPVGGIHMESILTESMLP 329
Query: 322 LKYAAF 327
LKY AF
Sbjct: 330 LKYVAF 335
>gi|357465107|ref|XP_003602835.1| Seryl-tRNA synthetase [Medicago truncatula]
gi|355491883|gb|AES73086.1| Seryl-tRNA synthetase [Medicago truncatula]
Length = 379
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/265 (83%), Positives = 243/265 (91%)
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
MKGKLEPSERQ LIE+GKNLKEGL LEEDL KL DELQ+EAQCIPNMTHPDVP+GGED
Sbjct: 1 MKGKLEPSERQTLIEQGKNLKEGLTALEEDLAKLNDELQREAQCIPNMTHPDVPIGGEDS 60
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
S IRKTVG+ F+FPVKDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM L+NW
Sbjct: 61 STIRKTVGSSPKFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALLNW 120
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
TLSEV+KRGFTPLTTPEIVRSSVVEKCGFQPR NTQVYSI+ +DQCLIGTAEIPVGG+H
Sbjct: 121 TLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQVYSIDDSDQCLIGTAEIPVGGLH 180
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MDSIL+ES+LPLKY AFSHCFRTEAGAAGTATRGLYRVHQFSK+EMF+FC+PEESD YHE
Sbjct: 181 MDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKIEMFIFCRPEESDYYHE 240
Query: 371 ELIRIEEDLYSSLGLHFKLLLFLAE 395
ELI+IEED++SSLGLHFK L +E
Sbjct: 241 ELIKIEEDMFSSLGLHFKTLDMASE 265
>gi|413920453|gb|AFW60385.1| hypothetical protein ZEAMMB73_399106 [Zea mays]
Length = 347
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/276 (80%), Positives = 247/276 (89%)
Query: 115 KEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
+EV+RLR ERNAVANKMKGKL+PS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ
Sbjct: 33 QEVERLRAERNAVANKMKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQS 92
Query: 175 IPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
IPN THPDVPVGGE+ S++RK VG+ FNF +KDH QLGK LD+FDFDAAAEVSGSKFY
Sbjct: 93 IPNTTHPDVPVGGEESSVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFY 152
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA 294
YLKNEAV+LEM L+NW +SEV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSIE +
Sbjct: 153 YLKNEAVLLEMALVNWAISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQVYSIEDS 212
Query: 295 DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
DQCLIGTAEIPVGGIHMDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+
Sbjct: 213 DQCLIGTAEIPVGGIHMDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKV 272
Query: 355 EMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EMF+FC+PEES +HEELI IEEDLY+SLGLHFK L
Sbjct: 273 EMFIFCRPEESGKWHEELITIEEDLYASLGLHFKTL 308
>gi|255580580|ref|XP_002531114.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223529310|gb|EEF31279.1| seryl-tRNA synthetase, putative [Ricinus communis]
Length = 355
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/358 (68%), Positives = 276/358 (77%), Gaps = 39/358 (10%)
Query: 6 LAAIPAAFSSSCFM---FRPVTKTLGL--ISRR------NHSQKPPFRLLARAFSA-PAL 53
+AAIPA+FSSS + V+KTL L ISRR ++S++P F L+ RA SA A+
Sbjct: 1 MAAIPASFSSSSSRFSFMKAVSKTLNLNPISRRFINNKVSYSKRPFFTLITRALSATAAV 60
Query: 54 QTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNV 113
Q TT++ VK KAAIDFKWIRDNKE V+ NI+NRNSNANLELVLELYEKML V
Sbjct: 61 QEPVTTESFNSKVVK---KAAIDFKWIRDNKEEVALNIKNRNSNANLELVLELYEKMLAV 117
Query: 114 QKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQ 173
QKEV+RLR ERNAVANKMKGKLEP ERQKLI+E EAQ
Sbjct: 118 QKEVERLRGERNAVANKMKGKLEPLERQKLIDE------------------------EAQ 153
Query: 174 CIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKF 233
CIPNMTHP VP+G EDC +RKT+ +P F+FPVKDH QLGK LD+FDFDAAAEVSGSKF
Sbjct: 154 CIPNMTHPHVPIGVEDCLTVRKTMCSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKF 213
Query: 234 YYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEG 293
YYLKNEAVMLEM L+NWTLSEV+KRGFTPLTTPE+VR+SVVEKCGFQPR NTQVYSIEG
Sbjct: 214 YYLKNEAVMLEMALVNWTLSEVMKRGFTPLTTPELVRASVVEKCGFQPREDNTQVYSIEG 273
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQF 351
+DQCLIGT +IPVGGIHM+SIL+ES+LPLKY AFSHCFRTEAGAAGTATR L + F
Sbjct: 274 SDQCLIGTRKIPVGGIHMESILTESMLPLKYVAFSHCFRTEAGAAGTATRYLSEHYLF 331
>gi|168051005|ref|XP_001777947.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670707|gb|EDQ57271.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 273/332 (82%), Gaps = 4/332 (1%)
Query: 59 TDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVD 118
TDN K WKA+IDFK+IRDNKEA++ NI+NR ++E V++LYE+ +++ +EVD
Sbjct: 1 TDNSS----KQTWKASIDFKFIRDNKEAIAKNIQNRKCGGDVEQVVQLYEQTVSLNQEVD 56
Query: 119 RLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
+LR ERNAVAN MK KL+ S R++LIE+GK LK+ + LE +L L ++LQ E Q IPNM
Sbjct: 57 KLRAERNAVANAMKTKLDASRREELIEKGKQLKDQVSELEIELSLLQEKLQLEGQRIPNM 116
Query: 179 THPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKN 238
THPDVPVG ED + +RK VG+ F FPVKDH ++G ALD+FDF+AAAEVSG+KFYYLKN
Sbjct: 117 THPDVPVGSEDVATLRKEVGSQRKFTFPVKDHVEVGLALDLFDFEAAAEVSGTKFYYLKN 176
Query: 239 EAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL 298
EA +LEM LINWT+S+++ +GF P++TP++VRS+VVEKCGFQPRG NTQVYS+EG D CL
Sbjct: 177 EAFLLEMALINWTMSKLLPKGFIPMSTPDLVRSTVVEKCGFQPRGQNTQVYSVEGTDLCL 236
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
GTAEIPVGG++MDS+L ES LPLK A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMFV
Sbjct: 237 AGTAEIPVGGMYMDSMLPESALPLKIVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFV 296
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PEESDS HEELI IEE+LY+SLGLHFK L
Sbjct: 297 ICRPEESDSLHEELISIEEELYASLGLHFKTL 328
>gi|224035863|gb|ACN37007.1| unknown [Zea mays]
Length = 383
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/260 (80%), Positives = 232/260 (89%)
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
MKGKL+PS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPDVPVGGE+
Sbjct: 1 MKGKLDPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDVPVGGEES 60
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
S++RK VG+ FNF +KDH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM L+NW
Sbjct: 61 SVLRKEVGSQRSFNFAIKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 120
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+SEV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSIE +DQCLIGTAEIPVGGIH
Sbjct: 121 AISEVSKKGFTPLITPEIVRSSVVEKCGFQPRAKNTQVYSIEDSDQCLIGTAEIPVGGIH 180
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF+FC+PEES +HE
Sbjct: 181 MDSILAESALPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESGKWHE 240
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
ELI IEEDLY+SLGLHFK L
Sbjct: 241 ELITIEEDLYASLGLHFKTL 260
>gi|125555413|gb|EAZ01019.1| hypothetical protein OsI_23053 [Oryza sativa Indica Group]
Length = 409
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/276 (78%), Positives = 244/276 (88%)
Query: 115 KEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
+EV+RLR ERNAVANKMKGKLEPS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ
Sbjct: 12 QEVERLRAERNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQS 71
Query: 175 IPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
IPN THPD PVGGE+ S++RK VG+ FNF ++DH QLGK LD+FDFDAAAEVSGSKFY
Sbjct: 72 IPNTTHPDAPVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFY 131
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA 294
YLKNEAV+LEM L+NW ++EV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSI+ +
Sbjct: 132 YLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNS 191
Query: 295 DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
DQCLIGTAEIPVGGIHMDSIL +S LP KY A+SHCFRTEAGAAG ATRGLYRVHQFSK+
Sbjct: 192 DQCLIGTAEIPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKV 251
Query: 355 EMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EMFVFC+PEESD HEELI IEE+LY+SLGLHFK L
Sbjct: 252 EMFVFCRPEESDKCHEELITIEEELYASLGLHFKTL 287
>gi|108864577|gb|ABA94785.2| seryl-tRNA synthetase family protein, expressed [Oryza sativa
Japonica Group]
Length = 382
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/260 (78%), Positives = 229/260 (88%)
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
MKGKLEPS RQ L+EEGKNLKEGL+ LEEDLV+LTD+LQ EAQ IPN THPD PVGGE+
Sbjct: 1 MKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDAPVGGEES 60
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
S++RK VG+ FNF ++DH QLGK LD+FDFDAAAEVSGSKFYYLKNEAV+LEM L+NW
Sbjct: 61 SVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLLEMALVNW 120
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
++EV K+GFTPL TPEIVRSSVVEKCGFQPR NTQVYSI+ +DQCLIGTAEIPVGGIH
Sbjct: 121 AITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAEIPVGGIH 180
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MDSIL +S LP KY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMFVFC+PEESD HE
Sbjct: 181 MDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEESDKCHE 240
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
ELI IEE+LY+SLGLHFK L
Sbjct: 241 ELITIEEELYASLGLHFKTL 260
>gi|307110880|gb|EFN59115.1| hypothetical protein CHLNCDRAFT_55978 [Chlorella variabilis]
Length = 551
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 243/350 (69%), Gaps = 28/350 (8%)
Query: 69 PQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
P ++A IDFK +RDN EAV+AN RNR S A+ LV LYE+ + Q+E D+LR RN +
Sbjct: 66 PAYRAYIDFKSLRDNVEAVAANCRNRLSKADPHLVARLYEEYVGAQQETDKLRAARNENS 125
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD------ 182
MKGKL+P +R LIE GK +KEGL LE L L ELQ+E Q +PNMTHP
Sbjct: 126 GAMKGKLDPEQRAALIERGKQIKEGLEGLEARLEALEAELQREGQRLPNMTHPGACGRRH 185
Query: 183 ----------------------VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIF 220
VP+GGE+ S + TVG F+FPVKDH QLG+ LD+
Sbjct: 186 GSRVASDELAGAPFSTGQSQCHVPIGGEEASAVLATVGQRPAFDFPVKDHLQLGEELDLI 245
Query: 221 DFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQ 280
DF+ VSG+KFYYL+NEA +LE+ L+NWT+ V+ GFTP+ TP++VR SV EKCGFQ
Sbjct: 246 DFETGGVVSGAKFYYLRNEAALLELALVNWTMQRVVAAGFTPIITPDLVRESVFEKCGFQ 305
Query: 281 PRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
PR NTQ+YS++ + CL GTAEIP+GG+ MD IL+E+ LPL+ AAF HCFRTEAGAAG+
Sbjct: 306 PRADNTQIYSVQDSAMCLTGTAEIPLGGVAMDRILAEAQLPLRMAAFGHCFRTEAGAAGS 365
Query: 341 ATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
A++GLYRVHQFSK+EMFV C PE+SD+ H++L+ +E L+S LGLHFK+L
Sbjct: 366 ASKGLYRVHQFSKVEMFVVCTPEQSDAVHQQLLDLEVGLFSDLGLHFKVL 415
>gi|308802754|ref|XP_003078690.1| seryl-tRNA synthetase, putative / serine--tRNA ligase, putative
(ISS) [Ostreococcus tauri]
gi|116057143|emb|CAL51570.1| seryl-tRNA synthetase, putative / serine--tRNA ligase, putative
(ISS) [Ostreococcus tauri]
Length = 506
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/373 (50%), Positives = 250/373 (67%), Gaps = 12/373 (3%)
Query: 22 PVTKTLGLISRRNHSQKPPFRLLARAFSAPALQTIDTTDNKGGVAVKPQ----WKAAIDF 77
P T + R + +Q FR +AR+ SA A D A +P WKAAIDF
Sbjct: 31 PTRATASAVRRASRAQ---FRGIARSASATAEAPSDAPR-----ASEPHAATVWKAAIDF 82
Query: 78 KWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEP 137
K++RDN EAV N R + N+ V+ YE + + + D +RE+RNA A MKGK+E
Sbjct: 83 KFVRDNAEAVQKNAGVRRVDVNVAEVVAKYEALNALSFKCDEIREKRNANAKSMKGKMEK 142
Query: 138 SERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTV 197
R LI EGK LK+ L LE +L L +ELQ AQ +PN+THPDVPVGGE+ + + V
Sbjct: 143 ETRDALIAEGKALKDSLAELEVELATLENELQTMAQRLPNLTHPDVPVGGEENATVVAEV 202
Query: 198 GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIK 257
G+ F FPV++H +G+ L +FDF+ ++VSGS+F YL MLE+ LINW ++V+
Sbjct: 203 GSQRAFTFPVQNHVDIGEKLGMFDFETGSKVSGSRFVYLTGVGAMLELALINWAFAKVLS 262
Query: 258 RGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSE 317
+GF P+ P++VRSSVVEKCGFQPR NTQVYSIE +D C+ GTAE+ +GG++MD ++ E
Sbjct: 263 KGFKPMMVPDMVRSSVVEKCGFQPRAENTQVYSIENSDLCMAGTAELLLGGVYMDEVVEE 322
Query: 318 SLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEE 377
S LP+K AAFSHCFRTEAGAAG TRG+YR+HQFSK+EMFV PE+SD+ H+EL IE
Sbjct: 323 SQLPIKMAAFSHCFRTEAGAAGAQTRGMYRLHQFSKVEMFVVATPEQSDAIHQELKDIEI 382
Query: 378 DLYSSLGLHFKLL 390
+++ LG HFK+L
Sbjct: 383 EMFQELGFHFKVL 395
>gi|145345412|ref|XP_001417206.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577433|gb|ABO95499.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 502
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 247/366 (67%), Gaps = 11/366 (3%)
Query: 30 ISRRNHSQKPPFR--LLARAFS---APALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNK 84
++RR +P R L RA + APAL T+ WKAAIDFK++RDN
Sbjct: 30 VARRWTPGRPAQRATLATRASATSEAPALNASGETNKALA------WKAAIDFKFVRDNA 83
Query: 85 EAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLI 144
E V N R + +++ ++ YE + + + D LRE RNA A MKGK++ R LI
Sbjct: 84 ELVQKNATTRKVDVDVQEIIAKYEALNALNFKCDELRERRNANAKSMKGKMDKEVRDGLI 143
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN 204
EGK +K+ L LE DL L ELQ AQ +PN+THPDVP+G E+ ++ R TVG F
Sbjct: 144 AEGKAIKDELAALEGDLAGLESELQTMAQRLPNLTHPDVPIGSEENTVTRATVGEQRAFT 203
Query: 205 FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLT 264
FPV++H +G+ L +FDF+ ++VSGS+F YL MLE+ LINW ++V+ +GF P+
Sbjct: 204 FPVQNHVDVGEKLGMFDFETGSKVSGSRFVYLTGVGAMLELALINWAFAKVLSKGFKPMM 263
Query: 265 TPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
P++VRSSVVEKCGFQPR NTQVYSIE +D C+ GTAE+ +GG++MD ++ ES LP+K
Sbjct: 264 VPDMVRSSVVEKCGFQPRAENTQVYSIENSDLCMAGTAELLLGGVYMDEVVEESQLPIKM 323
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLG 384
AAFSHCFRTEAGAAG TRG+YR+HQFSK+EMFV PE+SD+ HEELI IE ++++ LG
Sbjct: 324 AAFSHCFRTEAGAAGAQTRGMYRLHQFSKVEMFVVATPEQSDALHEELIGIETEMFAELG 383
Query: 385 LHFKLL 390
HFK+L
Sbjct: 384 FHFKVL 389
>gi|255076447|ref|XP_002501898.1| seryl-tRNA synthetase [Micromonas sp. RCC299]
gi|226517162|gb|ACO63156.1| seryl-tRNA synthetase [Micromonas sp. RCC299]
Length = 512
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/388 (48%), Positives = 254/388 (65%), Gaps = 17/388 (4%)
Query: 6 LAAIPAAFSSSCFMFRPVTKTLGLISRRNHSQKPPFRLLARAFSA-PALQTIDTTDNKGG 64
LAA P+A +S+ V RR+ + + AR F A A++ + G
Sbjct: 23 LAARPSAANSATLRAAAV--------RRDGAHR------ARLFCASAAVKEPEVAAKAGT 68
Query: 65 VAVKPQ--WKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLRE 122
A P WKAAIDFK I++N +A+ AN R + ++ V+ YE+ + +E D +RE
Sbjct: 69 DAPTPTLAWKAAIDFKRIKENPDAIQANADKRAAPCDVAKVVSTYERYQALNRECDEIRE 128
Query: 123 ERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
+RNA A MKGK+E R L+EEGK LK+ L +E DL L ELQ E Q IPN THPD
Sbjct: 129 KRNANAKSMKGKMEADVRAALVEEGKALKDQLAAIEGDLNALEVELQIEGQKIPNDTHPD 188
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VP+GGE+ +++R+ VG F+F V +H +G+ L +FDF ++V GS+F YL M
Sbjct: 189 VPIGGEEMAVLRREVGAKRDFSFEVANHVDIGERLGMFDFGTGSKVCGSRFVYLTGAGAM 248
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
LE+ LINW + +V+ +GF P+ P++VR S +EKCGFQPR NTQVY+IE ++ CL GTA
Sbjct: 249 LELALINWAMQKVVSKGFKPMVVPDLVRQSTMEKCGFQPRAENTQVYNIESSELCLAGTA 308
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EI +GG++MD ++ E LP+K AAFSHCFRTEAGAAG +TRG+YR+HQFSK+EMFV P
Sbjct: 309 EILLGGVYMDEVVDEKQLPIKMAAFSHCFRTEAGAAGASTRGMYRLHQFSKVEMFVVSTP 368
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+SD H+ELI IEE++Y LG HFK+L
Sbjct: 369 EQSDELHDELIGIEEEMYRELGFHFKVL 396
>gi|412990057|emb|CCO20699.1| seryl-tRNA synthetase [Bathycoccus prasinos]
Length = 508
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/327 (52%), Positives = 229/327 (70%), Gaps = 4/327 (1%)
Query: 68 KPQ--WKAAIDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREER 124
KPQ WKA+IDFK IR+N+ V N NRN +N +++ V+ YE + + ++ D LR R
Sbjct: 69 KPQEVWKASIDFKSIRENQSHVETNCLNRNVTNVSVQFVVSQYEAFVALDQKADLLRASR 128
Query: 125 NAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
N A KMKGK+E R +LIEEGK +K+ L +E +L ++D LQ+EAQ IPN THPDVP
Sbjct: 129 NENAKKMKGKMEKVIRDELIEEGKRIKDELALIEVELNDISDALQREAQKIPNDTHPDVP 188
Query: 185 VGGEDCSIIRKTVGNPSVFN-FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+GGE+ + + + VG F +DH +G+ L++FDF+ A+ VSG++F YL ML
Sbjct: 189 IGGEEFATVMEVVGTQRDFGAMKCRDHVTIGETLNMFDFETASRVSGTRFVYLTGVGAML 248
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
E+ LINW + + I +GF P+ P++VR SVVEKCGFQPR NTQVYS+E +D CL GTAE
Sbjct: 249 ELALINWAMQKAIAKGFEPMVVPDLVRKSVVEKCGFQPRAENTQVYSVENSDLCLAGTAE 308
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ +GG MD E LP K+ AFSHCFRTEAGAAG ATRG+YR+HQFSK+EMF PE
Sbjct: 309 LLLGGKCMDQTYEEKDLPKKFVAFSHCFRTEAGAAGAATRGMYRLHQFSKVEMFAVSTPE 368
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
S++ HEEL IE+++Y+ LGLHFK+L
Sbjct: 369 ASNAMHEELSNIEKEMYAELGLHFKVL 395
>gi|384246532|gb|EIE20022.1| putative seryl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
Length = 464
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/323 (49%), Positives = 236/323 (73%)
Query: 68 KPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAV 127
+P ++A +DF++++ N + + N++NRNS+A+ +LV LY+ + V +E++ +R +RN+
Sbjct: 19 RPAFRAYLDFRFVKSNLDKLRENVKNRNSSADPDLVARLYDNWVRVLEELESVRADRNSN 78
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
A MKGKL+P +R +L+++GK LK L LE ++ + D LQ+E Q +PN++HPDVPVGG
Sbjct: 79 ARAMKGKLDPEKRSELVDQGKALKARLAVLEAEVEMVEDALQREGQKLPNISHPDVPVGG 138
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E+ + + K VG+ VKDH +G ALD+ DF+ A VSG+KF YL+ A +LE+ L
Sbjct: 139 EEAARVIKMVGSRRNLGLEVKDHMAVGTALDLIDFETGANVSGAKFVYLRRAAALLELAL 198
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ + +V +GF P+TTP++VR SV+ KCGFQPRG NTQVYSI CL GTAE+P+
Sbjct: 199 CNYAMQKVASKGFLPMTTPDLVRESVLIKCGFQPRGDNTQVYSIRDTGLCLTGTAEVPLA 258
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
++MD I+ E LP++ AAF HCFRTEAG+AG+A+RGLYRVHQFSK+EMFV PE+S++
Sbjct: 259 AVYMDQIIPEEQLPIRLAAFGHCFRTEAGSAGSASRGLYRVHQFSKVEMFVLSTPEQSEA 318
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+EL IEE++++ LGLHF++L
Sbjct: 319 MLQELCDIEEEIFTELGLHFQML 341
>gi|449017083|dbj|BAM80485.1| serine--tRNA ligase, chloroplast or mitochondrial [Cyanidioschyzon
merolae strain 10D]
Length = 546
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/320 (50%), Positives = 219/320 (68%), Gaps = 4/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D +++RD+ V NI+ R + N LV++LYE+ + EVD +R++RN VA +MK
Sbjct: 102 VDLRYVRDHLAQVQENIQRRGVDVNATLVVQLYERFCALTAEVDLVRKQRNEVAARMKNM 161
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
KL P ER + I GK LKE + LE +L + +L EA IPN THPD PVGGED +
Sbjct: 162 QKLSPEERSECIALGKQLKERVTALEAELAETEQQLYAEAVRIPNRTHPDAPVGGEDQAR 221
Query: 193 IRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G P F +F KDH +L + LDI DF+AAA+V+G++FY+L+N MLE+ L+NW
Sbjct: 222 LLRMAGKPRDFTDFSPKDHVELAQRLDIVDFEAAAKVAGARFYFLRNAGAMLELALVNWA 281
Query: 252 LSEVI-KRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + K GF PL P++VR V CGFQPRG +QVYS+ CL GTAEIP+GG +
Sbjct: 282 MQHLTGKHGFIPLIAPDLVREETVWGCGFQPRGEASQVYSVADTSLCLAGTAEIPLGGYY 341
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL E+ LP+K AA SHCFR EAGAAGT TRGLYRVHQF+K+EMFV +PEESD H+
Sbjct: 342 ANEILDETQLPIKMAAVSHCFRREAGAAGTETRGLYRVHQFTKVEMFVLSRPEESDRVHQ 401
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
EL IEE+L+ +LGLH+++L
Sbjct: 402 ELRSIEEELFDALGLHYRVL 421
>gi|333995154|ref|YP_004527767.1| serine--tRNA ligase [Treponema azotonutricium ZAS-9]
gi|333737291|gb|AEF83240.1| serine--tRNA ligase [Treponema azotonutricium ZAS-9]
Length = 430
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 217/317 (68%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I DN +AV NI +R A+ + V+ L+ + + + L+++RNA A MKGK
Sbjct: 2 LDYRFIVDNLDAVKKNIESRYMKADADAVVRLFNRRTELTTSLQGLQQQRNANAAAMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
LEP R LIEEGK LKE + E +L + L+ EA+ IPNM HP+ P+G ED +
Sbjct: 62 LEPDARNALIEEGKKLKESIAASEAELSGVESSLETEARKIPNMAHPEAPLGKEDKDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P+ F+F DH +LG+ LDI DFD+ +VSG+KFYYLKNE V LE+GL+ + L
Sbjct: 122 VKRVGEPTKFDFEPADHVKLGQDLDIIDFDSGTKVSGTKFYYLKNEGVFLELGLVRYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GFTP TP++ + ++E GF PRGA + VY+IEG D CL+GTAEI +GG + +
Sbjct: 182 ILQKNGFTPFITPDVAKEEILEGIGFNPRGAESNVYTIEGEDSCLVGTAEITLGGYYSNM 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + LPL+ A SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PEES +HEEL
Sbjct: 242 ILPKEKLPLRMAGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEESGKFHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE+++S L + F+++
Sbjct: 302 GVEEEIFSGLEIPFRVV 318
>gi|339499194|ref|YP_004697229.1| Seryl-tRNA synthetase [Spirochaeta caldaria DSM 7334]
gi|338833543|gb|AEJ18721.1| Seryl-tRNA synthetase [Spirochaeta caldaria DSM 7334]
Length = 425
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/317 (50%), Positives = 222/317 (70%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I+DN EAV NIRNRN A+ + V L++ + ++ L+++RN A MKGK
Sbjct: 2 LDYRFIKDNLEAVKENIRNRNMKADADKVAMLFDTRNELVTQLQNLQQQRNTNAQAMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L+ R +LIEEGK LKE + E +L ++ EL E + IPNM HP P+G ED +
Sbjct: 62 LDADTRNRLIEEGKKLKEDIAAAEAELEQVEKELDTEGRRIPNMAHPSAPIGKEDKDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VGNP+ FNF KDH QLG+ LDI DFD+A +V+G+KFYYLKNE V LE+GLI + L
Sbjct: 122 VKRVGNPTTFNFEPKDHVQLGQELDIIDFDSATKVTGTKFYYLKNEGVFLELGLIRYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K+GFTP TP++ + ++E GF PRGA + VY++EG CL+GTAEI +GG + +
Sbjct: 182 ILQKKGFTPFITPDLAKEEILEGIGFNPRGAESNVYTVEGEGTCLVGTAEITLGGYYSGT 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
ILS+ LPL+ A SHCFR EAGAAG ++GLYRVHQF+K+EMF +C PEESD+ HEEL
Sbjct: 242 ILSKDKLPLRMAGLSHCFRREAGAAGQFSKGLYRVHQFTKVEMFAYCLPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ L + F+++
Sbjct: 302 SIEEEIFAGLEIPFRVV 318
>gi|325971623|ref|YP_004247814.1| seryl-tRNA synthetase [Sphaerochaeta globus str. Buddy]
gi|324026861|gb|ADY13620.1| Seryl-tRNA synthetase [Sphaerochaeta globus str. Buddy]
Length = 429
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 211/317 (66%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K ++ ++ ++ NIR RN + +++ ++EL E + +E + LR +RN A KMKGK
Sbjct: 2 IDLKELKARRDEIAQNIRVRNMHVDIDAIIELQESRSALMQEAENLRAKRNENAQKMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
L+ R LI EGK LKE + ++EE L + Q +A+ IPN HP PVG ED +
Sbjct: 62 LDAETRTTLITEGKMLKESIASVEEQLSAVEQTFQSQARTIPNYAHPQAPVGKEDKDNTA 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH QLG+ LD+ DFD A VSG KFYYLK EAV+L+M L +
Sbjct: 122 IKFVGTVPQFSFKAKDHVQLGETLDLIDFDTATRVSGPKFYYLKREAVLLQMALERYATD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
VI+RGFTP TP+I + ++ GF PRG + +Y++EG CL+GTAEI +GG + D
Sbjct: 182 IVIRRGFTPFITPDIAKEEILSGIGFNPRGEESNIYTLEGTGTCLVGTAEITLGGYYADQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL LP+K A SHCFR EAG AG ++GLYRVHQFSKLEMF++C PE+S++YH+EL+
Sbjct: 242 ILDREQLPIKMAGLSHCFRREAGGAGQYSKGLYRVHQFSKLEMFIYCLPEQSEAYHQELL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++S LGL ++++
Sbjct: 302 SIEEEIFSGLGLAYRVV 318
>gi|332297813|ref|YP_004439735.1| seryl-tRNA synthetase [Treponema brennaborense DSM 12168]
gi|332180916|gb|AEE16604.1| Seryl-tRNA synthetase [Treponema brennaborense DSM 12168]
Length = 425
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 218/317 (68%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I++N EAV NI +RN +A+ ++V+ L+++ + E+ L+++RN A MK K
Sbjct: 2 LDYRFIKENLEAVKKNIADRNMSADADMVVSLFDQRTALVTELQSLQQKRNDNAKAMKAK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L ER+KLIEEGK+ K+ + E+ L + + L+ E + IPNM HPD PVG D +
Sbjct: 62 LSDEERRKLIEEGKSFKDLIADCEKRLAETEERLELEGRKIPNMAHPDAPVGSVDSENLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F F KDH QLG+ LD+ DFDAA +VSG+KFYYLKNEAV LE L+ + L+
Sbjct: 122 VKRVGTPRTFTFKAKDHVQLGQELDLIDFDAATKVSGNKFYYLKNEAVFLEQSLVMYALN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GFTP TP++ R V++ GF PRG + VY++E CL+ TAEI +GG H
Sbjct: 182 ILRKHGFTPFITPDVAREEVLQGIGFNPRGNESNVYALEDEHACLVATAEITLGGYHSGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL +S LPL Y SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PE+SD+ HE+L
Sbjct: 242 ILDKSKLPLLYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEQSDALHEKLR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LGL F+++
Sbjct: 302 LIEEEIFTGLGLPFRVV 318
>gi|374815548|ref|ZP_09719285.1| seryl-tRNA synthetase [Treponema primitia ZAS-1]
Length = 426
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 216/317 (68%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I +N AV NI +R A+ + V+ L+ + + + L+++RNA A MKGK
Sbjct: 2 LDYRFIVENLPAVKKNIADRYMKADADAVVRLFNRRTELTTALQSLQQQRNANAAAMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
LEP R +LIEEGK KE + E +L K EL E + +PNM HP P+G ED +
Sbjct: 62 LEPEARNRLIEEGKKFKEDIAAAEAELGKTEAELDTEGRRVPNMAHPQAPLGKEDKDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P+ F+F DH +LG+ LDI DFD+A +VSG+KFYYLKNE V LE+GL+ + L
Sbjct: 122 VKRVGEPTKFDFEPVDHVKLGQDLDIIDFDSATKVSGTKFYYLKNEGVFLELGLVRYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ KRGFTP TP++ + ++E GF PRGA + VY++E CL+GTAEI +GG + ++
Sbjct: 182 ILQKRGFTPFITPDVAKEEILEGIGFNPRGAESNVYTVEDEGTCLVGTAEITLGGYYSNT 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
ILS LPL+ A SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PE+SD +HEEL
Sbjct: 242 ILSREKLPLRMAGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEDSDRFHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ L + F+++
Sbjct: 302 SIEEEIFTGLEIPFRVV 318
>gi|374317524|ref|YP_005063952.1| seryl-tRNA synthetase [Sphaerochaeta pleomorpha str. Grapes]
gi|359353168|gb|AEV30942.1| seryl-tRNA synthetase [Sphaerochaeta pleomorpha str. Grapes]
Length = 426
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 216/317 (68%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K ++ + ++ NI +RN + N++ ++EL +K + +E + R +RN A KMK K
Sbjct: 2 IDLKELKTRHDEIAKNISDRNMHVNIDEIIELQDKRSALMQESEAFRAKRNENAQKMKTK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
L+ RQ LI EGK +KE + +E +L ++ + Q++A+ IPN +P PVG ED +
Sbjct: 62 LDNETRQALIAEGKQIKEAIAAMEAELNEIEKDYQEKAKTIPNYYNPKAPVGKEDKDNTA 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F DH QLG++LD+ DFD A VSG KFYYLKN+AV+L+M L + +
Sbjct: 122 IKFVGEPPKFDFKPLDHVQLGESLDLIDFDTATRVSGPKFYYLKNQAVILQMALERYAMD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
V+K GFTP TP+I + ++ GF PRGA + +Y++EG CL+GTAEI +GG + +
Sbjct: 182 IVMKHGFTPFITPDIAKEEILNGIGFNPRGAESNIYTVEGTGTCLVGTAEITLGGYYANQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL +S LP+K SHCFR EAG AG ++GLYRVHQFSKLEMF++C PE+SDSYHE+L+
Sbjct: 242 ILDQSQLPIKMTGLSHCFRREAGGAGQYSKGLYRVHQFSKLEMFIYCLPEDSDSYHEQLL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++S LGL ++++
Sbjct: 302 AIEEEIFSGLGLAYRIV 318
>gi|330836880|ref|YP_004411521.1| seryl-tRNA synthetase [Sphaerochaeta coccoides DSM 17374]
gi|329748783|gb|AEC02139.1| seryl-tRNA synthetase [Sphaerochaeta coccoides DSM 17374]
Length = 428
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 212/317 (66%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K ++ +E ++ NI NRN +++ ++ L E+ L + +E + LR +RN A KMK K
Sbjct: 2 IDAKDLKTRREEIARNIANRNMKVDIDGIIALQEQRLALMQETENLRSDRNENARKMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
L ER LIEEGK +KE + +LE L + Q+ + IPN HPD PVG E+ S +
Sbjct: 62 LSQDERLILIEEGKAIKERIASLETGLETVEARYQEGLRSIPNFAHPDAPVGKEESDSTV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P VF F DH QLG+ LD+ DF+ A +VSG KFYY+KN+ V+L+MGL + L
Sbjct: 122 MKHVGIPPVFAFKPLDHVQLGEKLDLIDFETATKVSGPKFYYIKNQGVLLQMGLERYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
V+K GFTP TP++ + +++ GF PRGA + +Y++EG L+GTAEI +GG +
Sbjct: 182 IVMKHGFTPFITPDVAKDEILQGIGFNPRGAESNIYALEGTGTSLVGTAEITLGGYYSGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL ++ LPLK A SHCFR EAG AG ++GLYRVHQFSKLEMF+FC PEESD +H L+
Sbjct: 242 ILDKANLPLKLAGLSHCFRREAGGAGQYSKGLYRVHQFSKLEMFIFCLPEESDVFHARLL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEED++S LGL +++L
Sbjct: 302 AIEEDIFSGLGLAYRVL 318
>gi|320535443|ref|ZP_08035552.1| seryl-tRNA synthetase [Treponema phagedenis F0421]
gi|320147730|gb|EFW39237.1| seryl-tRNA synthetase [Treponema phagedenis F0421]
Length = 468
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/317 (49%), Positives = 215/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I++N AV NI +RN +A+ + V+ L++ + E+ L+ +RN A KMK K
Sbjct: 45 LDYRFIKENLAAVKKNITDRNMHADADAVVTLFDARTELVTELQGLQAKRNENAQKMKQK 104
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
LEP ER +L+E GK LK + +E L + +L++ A+ IPNM HPD P+G ED
Sbjct: 105 LEPEERNQLVEAGKVLKTEIAEVEAKLGETEKKLEEAARLIPNMAHPDAPIGKEDKDNTE 164
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH QLG+ALDI DFDA +VSG KFYYLKNE V LE LI + L+
Sbjct: 165 VKRVGVVPSFDFEPKDHVQLGEALDIVDFDAGTKVSGVKFYYLKNEGVFLEQALILYGLN 224
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GFTP TP+I + +++ GF PRG + VY++EG CL+ TAEI +GG H D
Sbjct: 225 VLRKHGFTPFITPDIAKEEILQGIGFIPRGEESNVYTLEGEGTCLVATAEITLGGYHADE 284
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
ILS++ LPL Y SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PEESDS+HE+L
Sbjct: 285 ILSQTKLPLLYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEESDSWHEKLR 344
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+L+ L + F+++
Sbjct: 345 AIEEELFIGLDIPFRVV 361
>gi|333999257|ref|YP_004531869.1| serine--tRNA ligase [Treponema primitia ZAS-2]
gi|333740917|gb|AEF86407.1| serine--tRNA ligase [Treponema primitia ZAS-2]
Length = 427
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+ +I DN AV NI +R A+ + V+ L+ + + + L+++RNA A MKGK
Sbjct: 2 LDYHFIADNLPAVKKNITDRYMKADADAVVRLFNRRTELVTALQSLQQQRNANAAAMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
LEP +R LIEEGK LK+ + E +L + EL E + IPNM HP PVG ED +
Sbjct: 62 LEPDKRAALIEEGKKLKDDIAGEETELGSVEAELDTEGRRIPNMAHPQAPVGKEDKDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P+ F+F DH +LG+ LDI DFD+A +VSG+KFYYLKNE V LE+GL+ + L
Sbjct: 122 VKRVGEPTKFDFEPVDHVKLGQDLDIIDFDSATKVSGTKFYYLKNEGVFLELGLVRYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ KRGFTP TP+I + ++E GF PRGA + VY++E CL+GTAEI +GG + +
Sbjct: 182 ILQKRGFTPFITPDIAKEEILEGIGFNPRGAESNVYTVEDEGTCLVGTAEITLGGYYSNV 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL LPL+ A SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PE+SD HEEL
Sbjct: 242 ILPREKLPLRMAGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCLPEDSDRLHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE++++ L + F+++
Sbjct: 302 AVEEEIFAGLEIPFRVV 318
>gi|381181448|ref|ZP_09890282.1| seryl-tRNA synthetase [Treponema saccharophilum DSM 2985]
gi|380766668|gb|EIC00673.1| seryl-tRNA synthetase [Treponema saccharophilum DSM 2985]
Length = 442
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I++N EAV NI NRN NA+ +LV+ L+++ ++ ++ L+++RNA A MK K
Sbjct: 2 LDYRFIKENLEAVKQNIVNRNMNADADLVVRLFDERTSLATKLQELQQKRNANAAAMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQK I+EGK +KE + T E++L + +L + + IPNM HP+ P+G D +
Sbjct: 62 LTPEERQKYIDEGKQIKEAVATAEKELSECEAKLDEAGRQIPNMAHPETPIGKLDTENLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F F KDH QLG+ LDI DF+ +VSG KFYYLKNEAV LE LI + L+
Sbjct: 122 VKKVGTPRKFGFKPKDHVQLGEELDIIDFERGTKVSGPKFYYLKNEAVFLEEALIMYALN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GFTP TP++ + +++ GF PRG + VY+IE CL+ TAEI +GG H
Sbjct: 182 ILRKHGFTPFITPDVAKEDILKGIGFNPRGNESNVYAIEEEGTCLVATAEITLGGFHSGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL++ LPL Y SHCFR EAG AG ++GLYRVHQF K+EMFV+C PE+SD HE+L
Sbjct: 242 ILAKEALPLYYCGLSHCFRREAGGAGQFSKGLYRVHQFDKVEMFVYCLPEQSDEIHEKLR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++ LG+ F ++
Sbjct: 302 LIEEEIFEGLGIPFHVV 318
>gi|386347714|ref|YP_006045963.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
gi|339412681|gb|AEJ62246.1| Seryl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
Length = 425
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 223/318 (70%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++++++ + V N+RNR ++E V+ LY++ +++ VD LR RN A MK
Sbjct: 2 LDLRFVKEHVDLVKENVRNRFMEVDVEGVVALYDRRNDLKARVDELRARRNEHARLMKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE--DCSI 192
P ER L+EEG+ LKE + LE +L + +EL++EA IPN++HP+ PVG E D
Sbjct: 62 -SPEERPALVEEGRRLKEEIARLEGELAAVEEELRREALRIPNLSHPEAPVGKEEKDNLE 120
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
IR+ PS F+F +DH +LG+ LDI DFD AA+VSG+KFYYLKNE +LE+ LI + L
Sbjct: 121 IRRWGEVPS-FDFEPRDHLELGRLLDIVDFDRAAKVSGAKFYYLKNEGTLLELALIRYAL 179
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++GF TTP++ R S+VE GFQPRGA + +Y++E D CL+GTAEI +GG++ D
Sbjct: 180 DVLREKGFDLFTTPDLARESIVEGIGFQPRGAESNIYTVEETDLCLVGTAEITLGGMYAD 239
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ LPL++A SHCFR EAGAAG ++GLYRVHQF+K+EMFV+C+PEES+ H EL
Sbjct: 240 EIIPGQALPLRFAGLSHCFRKEAGAAGQYSKGLYRVHQFTKVEMFVYCRPEESEGMHREL 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ IEE++++ LG+ ++++
Sbjct: 300 LAIEEEIHAGLGIPYRVV 317
>gi|430744117|ref|YP_007203246.1| seryl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
gi|430015837|gb|AGA27551.1| seryl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
Length = 431
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/321 (46%), Positives = 218/321 (67%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL----ELVLELYEKMLNVQKEVDRLREERNAVANK 130
+D K++ N EAV N RNRN ++ ++V+EL +K + +EV+ +R +NA A
Sbjct: 2 LDIKYLLANVEAVKQNCRNRNVPTDILDAVDVVVELEQKRKTLLQEVEEVRRLQNANAQA 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-ED 189
+ +P +RQ I EGK LK + E +L L L+ IPN+THPD P+G ED
Sbjct: 62 TGKEKDPEKRQAFIAEGKQLKASIGDNETELKSLDAHLKSHLARIPNLTHPDAPIGALED 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
S+ + VG P F+F +DH ++GKALD+ DF++ A+VSG FY+LKN+AV+LE+ L
Sbjct: 122 ESLELRKVGTPRAFDFKARDHVEIGKALDLIDFESGAKVSGHGFYFLKNDAVLLELALQQ 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + ++ +GF+P+ TP++ R+ ++E GF PRG TQ+YS+E +D LIGTAEI +GG+
Sbjct: 182 FAIRTLVAKGFSPIVTPDLARNQILEGIGFTPRGTETQIYSVEESDLSLIGTAEITLGGM 241
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D I E++LPLKY SHCFRTEAGAAG A++GLYRVHQF+K+EMF F PE S+ H
Sbjct: 242 HADEIFDEAVLPLKYVGLSHCFRTEAGAAGRASKGLYRVHQFTKIEMFAFTTPEASNQAH 301
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EL+ IEE+++++LG+ +++L
Sbjct: 302 AELLAIEEEIFTALGIPYRVL 322
>gi|328948174|ref|YP_004365511.1| seryl-tRNA synthetase [Treponema succinifaciens DSM 2489]
gi|328448498|gb|AEB14214.1| Seryl-tRNA synthetase [Treponema succinifaciens DSM 2489]
Length = 445
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/320 (48%), Positives = 219/320 (68%), Gaps = 4/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D+++I+DN EAV NI +RN + A+ +LV++L+++ + E+ L+++RNA A M
Sbjct: 2 LDYRFIKDNLEAVKKNIIDRNMDPAKADADLVVKLFDERTALTTELQNLQQKRNANAAAM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K KL+P R K IEEGKN+K+ + + E L +L +L++ + IPNM +P+VPVG D
Sbjct: 62 KQKLDPETRAKYIEEGKNIKDAVSSAESKLSELEVKLEEAGRQIPNMANPEVPVGKVDTE 121
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ K VG P F+F K H +LG++LD+ DF+ +VSG+KFYYLKNEAV LE LI +
Sbjct: 122 NLEVKKVGQPRKFDFKPKSHVELGESLDLIDFERGTKVSGAKFYYLKNEAVFLEQSLIMY 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L+ + K GFT TP+I R +++ GF PRG + VY+IE CL+ TAEI +GG H
Sbjct: 182 ALNILRKHGFTTFITPDIAREEILKGIGFNPRGNESNVYAIEDEGTCLVATAEITLGGYH 241
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL +S LPL Y SHCFR EAGAAG ++GLYRVHQF K+EMFV+C PE+SDS HE
Sbjct: 242 SGEILDKSKLPLMYCGLSHCFRREAGAAGQFSKGLYRVHQFDKVEMFVYCLPEQSDSLHE 301
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L IEE+++S LGL F+++
Sbjct: 302 KLRLIEEEIFSGLGLPFRVV 321
>gi|384108580|ref|ZP_10009472.1| seryl-tRNA synthetase [Treponema sp. JC4]
gi|383869821|gb|EID85428.1| seryl-tRNA synthetase [Treponema sp. JC4]
Length = 426
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 210/317 (66%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I+DN EAV NI NRN A ++V+ELY+K + ++ L+++RN A MK K
Sbjct: 2 LDYKFIKDNLEAVKQNIINRNMKAEADIVVELYDKRTALVTKLQALQQKRNENAQAMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
LE ER KLIE GK +K + +E + + ++L++ A+ +PNM HPD PVG D +
Sbjct: 62 LEADERAKLIEAGKQIKAEIADVESESKAIEEKLEEAARQLPNMVHPDAPVGKLDTENLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH QLG+ LDI DFD +VSG KFYYLKN+AV LE LI + L+
Sbjct: 122 VKKVGTPRKFDFEPKDHVQLGEELDIIDFDRGTKVSGPKFYYLKNDAVFLEQALIMYALN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF TP++ + V++ GF PRG + VYSIE CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKLFITPDVAKEEVLKGIGFNPRGNESNVYSIEEEGTCLVATAEITLGGYHKDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL ++ LPL Y SHCFR EAGAAG ++GLYRVHQF K+EMFV+ PE+SD HE+L
Sbjct: 242 ILDKASLPLLYGGLSHCFRREAGAAGQFSKGLYRVHQFDKVEMFVYSTPEQSDELHEKLR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+IEE+++ LG+ F ++
Sbjct: 302 QIEEEIFEGLGIPFHVV 318
>gi|452819462|gb|EME26520.1| seryl-tRNA synthetase [Galdieria sulphuraria]
Length = 501
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 237/371 (63%), Gaps = 10/371 (2%)
Query: 26 TLGLISRR--NHSQKPPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDN 83
TL I+ R N S P R AR S P + T+ V + +DF++ D+
Sbjct: 32 TLSRITNRCCNLSHTCPLR--ARKRSTPLWYCV--TEKTVNVVKNAPTRNILDFRYFCDH 87
Query: 84 KEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPS---ER 140
E NIRNR +++ + LY++ + ++ +LR+ERN VA ++K S E+
Sbjct: 88 LEVYRENIRNRGLQIDVDGIKSLYQRQCELISQIQQLRKERNQVAERLKNIANISSTKEK 147
Query: 141 QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTV-GN 199
+ E+GK LK + LE+ L + + L EA +PN+THPDVP+G E+ + + K V
Sbjct: 148 NEYKEQGKVLKTDIANLEKQLETVEETLFIEAMKVPNLTHPDVPIGAEEQARVLKVVDAA 207
Query: 200 PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRG 259
S V +H + + LD+ DF++AA+VSG KFYYLKN A +LE+ LINW+L+ V+ +G
Sbjct: 208 QSAPPEHVDNHLLIAERLDLADFESAAKVSGQKFYYLKNAAALLEVALINWSLNHVVSKG 267
Query: 260 FTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESL 319
FTPL+TP++VR+ VV CGFQPRG +Q+Y + +D CL+GTAEIP+GG +M+ IL E
Sbjct: 268 FTPLSTPDLVRTEVVLACGFQPRGEASQIYRVADSDLCLVGTAEIPLGGYYMNQILDEQS 327
Query: 320 LPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDL 379
LP++ AF HCFR E G+AG A++GLYRVHQF+K+EMFV C+P +SD+ E+L+ I+ ++
Sbjct: 328 LPIRMVAFGHCFRKEVGSAGQASKGLYRVHQFTKVEMFVLCKPNQSDALLEDLLNIQMEM 387
Query: 380 YSSLGLHFKLL 390
+SSLG +++L
Sbjct: 388 FSSLGFSYRVL 398
>gi|449128175|ref|ZP_21764422.1| seryl-tRNA synthetase [Treponema denticola SP33]
gi|448941508|gb|EMB22409.1| seryl-tRNA synthetase [Treponema denticola SP33]
Length = 422
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 212/317 (66%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E DL + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEADLAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRSGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP++ + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDVAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGISHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++ LG+ F+++
Sbjct: 302 LIEEEIFDGLGIPFRVV 318
>gi|422341387|ref|ZP_16422328.1| seryl-tRNA synthetase [Treponema denticola F0402]
gi|325474958|gb|EGC78144.1| seryl-tRNA synthetase [Treponema denticola F0402]
Length = 422
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAETEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP+I + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449105451|ref|ZP_21742155.1| seryl-tRNA synthetase [Treponema denticola ASLM]
gi|451969755|ref|ZP_21922984.1| seryl-tRNA synthetase [Treponema denticola US-Trep]
gi|448967154|gb|EMB47796.1| seryl-tRNA synthetase [Treponema denticola ASLM]
gi|451701514|gb|EMD55978.1| seryl-tRNA synthetase [Treponema denticola US-Trep]
Length = 422
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK++KE + E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKSIKEKIAQAETELTEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP+I + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|302339395|ref|YP_003804601.1| seryl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301636580|gb|ADK82007.1| seryl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 434
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/317 (45%), Positives = 203/317 (64%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
++ K+++++ V NI NR+ + + LY+K + + V+ R RN A MKGK
Sbjct: 2 LEMKFVKEHLAEVQQNIINRHMKVDAAEAVRLYDKRNELLRSVEEKRRARNENARAMKGK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L ER KLIE+GK LK + LE++L + LQ IPNM HPD PVG ED +
Sbjct: 62 LSQEERTKLIEDGKELKRSIAELEKNLEETETALQGYTSAIPNMAHPDAPVGKEDKDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+FP KDH +LG ALDI DF+ A+ V+G KFYYL+NE V LE+ L+ + L
Sbjct: 122 IKRWGTVPHFDFPSKDHVELGSALDIVDFETASRVTGQKFYYLRNEGVFLELALVRYALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ KRGFTP TP++ R +VE GF PRG + +Y++EG CL+GTAEI +GG H
Sbjct: 182 ILTKRGFTPTITPDLAREEIVEGIGFNPRGEESNIYTLEGTGTCLVGTAEITLGGYHAGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
++ LP+K A SHCFR EAGAAG ++GLYRVHQF+K+EMFV+C PEES++ H L+
Sbjct: 242 LIDGQRLPIKLAGLSHCFRREAGAAGQFSKGLYRVHQFTKVEMFVYCTPEESEAMHHSLL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++ L + ++++
Sbjct: 302 AIEEEIFQGLEIPYRIV 318
>gi|303276687|ref|XP_003057637.1| seryl-tRNA synthetase [Micromonas pusilla CCMP1545]
gi|226460294|gb|EEH57588.1| seryl-tRNA synthetase [Micromonas pusilla CCMP1545]
Length = 376
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/260 (55%), Positives = 190/260 (73%)
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
MKGK++ +R LIEEGK LK+ L LE++L L +Q E Q IPN THPDVP+GGE+
Sbjct: 1 MKGKMDKEKRDALIEEGKALKDELAGLEQELGALETTMQIEGQKIPNDTHPDVPIGGEEV 60
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ +R+ VG F+F V +H +G+ L +FDF+ +V GS+F YL MLE+ LINW
Sbjct: 61 AALRREVGAKRDFSFAVANHVDVGERLGMFDFETGGKVCGSRFVYLTGAGAMLELALINW 120
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ +V+ +GF P+ P++VR S +EKCGFQPR NTQVYSI+ ++ CL GTAEI +GG++
Sbjct: 121 AMQKVVAKGFKPMVVPDLVRQSTMEKCGFQPRAENTQVYSIQDSELCLAGTAEILLGGVY 180
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD L E LP+K AAFSHCFRTEAGAAG ATRG+YR+HQFSK+EMFV PE+SD+ H+
Sbjct: 181 MDEALEEKQLPIKMAAFSHCFRTEAGAAGAATRGMYRLHQFSKVEMFVVSTPEQSDAIHD 240
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
ELI IEE++Y LG HFK+L
Sbjct: 241 ELIAIEEEMYDELGFHFKVL 260
>gi|320104218|ref|YP_004179809.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644]
gi|319751500|gb|ADV63260.1| seryl-tRNA synthetase [Isosphaera pallida ATCC 43644]
Length = 432
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 218/322 (67%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL----ELVLELYEKMLNVQKEVDRLREERNAVANK 130
+D K++ + + V AN RNR ++ + ++ L + + + V+ +R +N +A
Sbjct: 2 LDLKYVIAHADEVKANCRNRCVAQDIIDEVDQIVRLDAERRELTQAVEEVRRRQNEIAQA 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--E 188
+ P R +L+ EG+ LK+ + E L L D+L++ IPN THPD P+G E
Sbjct: 62 TSKEKNPDARARLVAEGRALKDSIADREASLKALEDDLKRRLARIPNRTHPDAPIGRTEE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D +R+ VG+ F FP KDH +LGKALD+ DF++AA+VSG FY+LKN+AV+L++ L
Sbjct: 122 DSRELRR-VGSIPTFTFPPKDHVELGKALDLIDFESAAKVSGHGFYFLKNDAVLLDLALQ 180
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + +I++G+TP+ TP++ R++++E GF PRG TQVYSIE D L+GTAEI +GG
Sbjct: 181 RFAIDLLIRKGYTPVVTPDLARNAILEGIGFAPRGPETQVYSIEDTDLSLVGTAEITLGG 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D +L E+ LP++Y SHCFRTEAGAAG A++GLYRVHQF+K+EMFVF PE SD+
Sbjct: 241 LHADDLLDEADLPIRYVGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFVFSTPETSDAL 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H+EL+ IEE+++ +LG+ +++L
Sbjct: 301 HKELLAIEEEIFQALGIPYRVL 322
>gi|383790986|ref|YP_005475560.1| seryl-tRNA synthetase [Spirochaeta africana DSM 8902]
gi|383107520|gb|AFG37853.1| seryl-tRNA synthetase [Spirochaeta africana DSM 8902]
Length = 430
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 209/320 (65%), Gaps = 1/320 (0%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ID K ++++ + ANI R A+ E LELYE+ +Q E+D LR RN A +M
Sbjct: 3 QGMIDVKHLKEHLDQHKANITARGMVADPERALELYERRNRLQTELDELRRLRNDTAARM 62
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
KGKLE SER++LI EGK LK + E + + +L+ E + IPN+ HPD P+G ED
Sbjct: 63 KGKLEQSEREELIAEGKRLKNEIPAREHEFEQTDHQLRGELERIPNLAHPDAPIGKEDKD 122
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ +T G F+F KDH QLG LD+ DF+ A V+G KFY+LKN+AV LE+ L +
Sbjct: 123 NLQLRTWGEIPKFDFTPKDHVQLGSELDLIDFETATRVTGPKFYFLKNQAVFLELALARF 182
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ GFTP TP+I R VV GF PRG + +Y++EG CL+GTAEI +GG H
Sbjct: 183 ALDKLQGHGFTPTITPDIAREEVVSGIGFNPRGEESNIYTLEGTGTCLVGTAEITLGGYH 242
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+L+ S LP++ A SHCFR EAGAAG ++GLYRVHQF+K+EMFV+ PEES++ H+
Sbjct: 243 AGKMLTASELPIRLAGLSHCFRREAGAAGQFSKGLYRVHQFTKVEMFVYTTPEESEAEHD 302
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L IEE+++ +L + ++++
Sbjct: 303 RLCAIEEEIFQALEIPYRVV 322
>gi|307719618|ref|YP_003875150.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
gi|306533343|gb|ADN02877.1| seryl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
Length = 425
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 223/318 (70%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++++++ E V N+RNR ++E V+ LY++ +++ VD LR RN A MK
Sbjct: 2 LDLRFVKEHVELVKENVRNRFMEVDVEGVVALYDRRNDLKARVDELRARRNEHARLMKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE--DCSI 192
P ER +EEG+ LKE + LEE+L + +EL++EA IPN++HP+ PVG E D
Sbjct: 62 -SPDERPARVEEGRRLKEEIARLEEELAAVEEELRREALRIPNLSHPEAPVGKEEKDNLE 120
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
IR+ PS F+F +DH +LG+ LDI DFD AA+VSG+KFYYLKNE +LE+ L+ + L
Sbjct: 121 IRRWGKVPS-FDFEPRDHLELGRLLDIVDFDRAAKVSGAKFYYLKNEGALLELALVRYAL 179
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++GF TTP++ R S+VE GFQPRGA + +Y++E D CL+GTAEI +GG++ D
Sbjct: 180 DVLREKGFDLFTTPDLARESIVEGIGFQPRGAESNIYTVEETDLCLVGTAEITLGGMYAD 239
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ LPL++A SHCFR EAGAAG ++GLYRVHQF+K+EMFV+C+PEES+ H EL
Sbjct: 240 EIIPGETLPLRFAGVSHCFRKEAGAAGQYSKGLYRVHQFTKVEMFVYCRPEESEGIHREL 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ IEE++++ LG+ ++++
Sbjct: 300 LAIEEEIHAGLGIPYRVV 317
>gi|42527809|ref|NP_972907.1| seryl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|449111198|ref|ZP_21747797.1| seryl-tRNA synthetase [Treponema denticola ATCC 33521]
gi|449113982|ref|ZP_21750465.1| seryl-tRNA synthetase [Treponema denticola ATCC 35404]
gi|449116564|ref|ZP_21753012.1| seryl-tRNA synthetase [Treponema denticola H-22]
gi|67461817|sp|Q73KB2.1|SYS_TREDE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|41818637|gb|AAS12826.1| seryl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|448953457|gb|EMB34248.1| seryl-tRNA synthetase [Treponema denticola H-22]
gi|448958065|gb|EMB38804.1| seryl-tRNA synthetase [Treponema denticola ATCC 35404]
gi|448959461|gb|EMB40182.1| seryl-tRNA synthetase [Treponema denticola ATCC 33521]
Length = 422
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP+I + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449104496|ref|ZP_21741236.1| seryl-tRNA synthetase [Treponema denticola AL-2]
gi|448963515|gb|EMB44193.1| seryl-tRNA synthetase [Treponema denticola AL-2]
Length = 422
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP+I + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449119376|ref|ZP_21755772.1| seryl-tRNA synthetase [Treponema denticola H1-T]
gi|449121766|ref|ZP_21758112.1| seryl-tRNA synthetase [Treponema denticola MYR-T]
gi|448949207|gb|EMB30032.1| seryl-tRNA synthetase [Treponema denticola MYR-T]
gi|448950366|gb|EMB31188.1| seryl-tRNA synthetase [Treponema denticola H1-T]
Length = 422
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP++ + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDVAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449129366|ref|ZP_21765597.1| seryl-tRNA synthetase [Treponema denticola SP37]
gi|448946208|gb|EMB27073.1| seryl-tRNA synthetase [Treponema denticola SP37]
Length = 422
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP++ + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDVAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDAIHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449124353|ref|ZP_21760672.1| seryl-tRNA synthetase [Treponema denticola OTK]
gi|448942684|gb|EMB23578.1| seryl-tRNA synthetase [Treponema denticola OTK]
Length = 422
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP+ PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP++ + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDVAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGISHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|449108692|ref|ZP_21745333.1| seryl-tRNA synthetase [Treponema denticola ATCC 33520]
gi|448960967|gb|EMB41675.1| seryl-tRNA synthetase [Treponema denticola ATCC 33520]
Length = 422
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 212/317 (66%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+K+I++N EAV NI+NR+ NA+ + +ELY+K + + L+++RN + MK K
Sbjct: 2 LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L P ERQKL+++GK +KE + +E +L + L + IPNM HP PVG ED +
Sbjct: 62 LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPKAPVGKEDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GF P TP++ + ++ GF PRG + VYS+EG CL+ TAEI +GG H D
Sbjct: 182 ILRKHGFKPFITPDVAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LPLKY SHCFR EAGAAG ++GLYRVHQFSKLEMFV+C PEESD+ HEEL
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE++++ LG+ F+++
Sbjct: 302 LIEEEIFNGLGIPFRVV 318
>gi|119953022|ref|YP_945231.1| seryl-tRNA synthetase [Borrelia turicatae 91E135]
gi|119861793|gb|AAX17561.1| seryl-tRNA synthetase [Borrelia turicatae 91E135]
Length = 425
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/317 (46%), Positives = 211/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN E + NI++R +++L++ L ++ + ++ L RN AN MKGK
Sbjct: 3 LDLKFIRDNLELIQKNIKDRGLELDIDLLISLDDERKKLVTKIGELNAIRNENANAMKGK 62
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
++ S R IE GK LK + LEE L +T +L E + IPN++ PDVPVG GED +I+
Sbjct: 63 IDDSRRHSFIETGKVLKSEIAILEEKLSHITSKLLIEHKRIPNISAPDVPVGEGEDGNIV 122
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G+ F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ LIN+ L+
Sbjct: 123 LKVSGSIPNFDFKPKDHLEIGIDLDLFDFERAREVSGNKFYYLKNEAVFLELALINFALN 182
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP+I R +V+ GF PRG + +Y IE D+ LIGTAEI +GG + ++
Sbjct: 183 KLKPKGFDLFITPDIAREFIVDGIGFNPRGTESNIYKIEDTDKYLIGTAEITLGGYYYNT 242
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL PLK A SHCFR EAGAAG ++GLYRVHQFSK+EMF C+ E+SD H E +
Sbjct: 243 ILDLK-SPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCLCKSEDSDRIHNEFL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE++++ L + +++L
Sbjct: 302 ALEEEIFTELEIPYRVL 318
>gi|257457271|ref|ZP_05622442.1| seryl-tRNA synthetase [Treponema vincentii ATCC 35580]
gi|257445193|gb|EEV20265.1| seryl-tRNA synthetase [Treponema vincentii ATCC 35580]
Length = 425
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 206/319 (64%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++I++N EAV NI NR +A+ E + L+++ + + L+ +RN + MK
Sbjct: 2 LDYRFIKNNLEAVKRNIINRAMHADAEAAVRLFDERTEMVTALQGLQAKRNENSLAMKKA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED---CS 191
+ +ER LIE GK +K + E L + L IPNM HPD P+G ED C
Sbjct: 62 KDAAERTALIETGKAIKAEIAAAETALKEKEAALDAAMMQIPNMAHPDAPIGKEDKDNCE 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ K VG F+F KDH QLG+ LD+ DFDAA +V+G KFYYLKNEAV LE L+ +
Sbjct: 122 V--KRVGTVPQFDFEPKDHVQLGEELDLIDFDAATKVAGVKFYYLKNEAVFLEQALVLYG 179
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L+ + K GFTP TP++ + ++ GF PRG+ + VY+IE CL+ TAEI +GG H
Sbjct: 180 LNILRKHGFTPFITPDVAKEEILRGIGFNPRGSESNVYTIEDEGTCLVATAEITLGGYHS 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL ++ LPL Y SHCFR EAGAAG ++GLYRVHQF+KLEMFV+C PEESD+ HE+
Sbjct: 240 DEILEKAKLPLMYCGLSHCFRREAGAAGQFSKGLYRVHQFTKLEMFVYCTPEESDAIHEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L IEE+++S LG+ F+++
Sbjct: 300 LRLIEEEIFSGLGIAFRVV 318
>gi|301108605|ref|XP_002903384.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
gi|262097756|gb|EEY55808.1| seryl-tRNA synthetase [Phytophthora infestans T30-4]
Length = 491
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 207/329 (62%), Gaps = 10/329 (3%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERN------ 125
+A +D+K + +N +A N + R S+ N +LV +LY++ ++ V+ LR ERN
Sbjct: 54 QARLDYKKLVENVDAAIENGKKRCSDGNPQLVADLYQRQAKLRHSVNLLRAERNTHAKQL 113
Query: 126 ---AVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
A A K +G+ + L G+ LK + +E +L +++ EL+ EA IPN THPD
Sbjct: 114 GQAAAAKKKQGQEAEQVFETLRLRGQELKREIADVEAELGQVSAELELEALKIPNDTHPD 173
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VPVGGE+ S + G VFNF KDH+ L AL++ D AA+V+GSKF YL NE M
Sbjct: 174 VPVGGEEESRVVMKYGEKPVFNFKPKDHYDLATALELLDTQTAAKVAGSKFTYLCNEGAM 233
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
+E+ L++WTLS++ RGF + P++ +VE CGFQPRG TQ+YSI +D CL T+
Sbjct: 234 MEIALVHWTLSKLRARGFKVMFPPDVAHYKLVEGCGFQPRGEATQIYSIANSDLCLTATS 293
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EI + + ILS LPLKYA FSHCFRTE G G TRG+YR+HQFSK+EMF FC
Sbjct: 294 EITLAAAKSNEILSTPTLPLKYAGFSHCFRTEIGHGGRLTRGIYRIHQFSKVEMFAFCAN 353
Query: 363 E-ESDSYHEELIRIEEDLYSSLGLHFKLL 390
E ++ + +E++ I+ +Y+ LGLH++L+
Sbjct: 354 ETQAQEFFDEMVEIQTSMYAELGLHYELM 382
>gi|15639634|ref|NP_219084.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025872|ref|YP_001933644.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|378973155|ref|YP_005221760.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|378974222|ref|YP_005222829.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378975280|ref|YP_005223889.1| serine--tRNA ligase [Treponema pallidum subsp. pallidum DAL-1]
gi|378982131|ref|YP_005230437.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str. CDC2]
gi|384422150|ref|YP_005631509.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Chicago]
gi|408502509|ref|YP_006869953.1| serine--tRNA ligase [Treponema pallidum subsp. pallidum str. Mexico
A]
gi|6094414|sp|O83653.1|SYS_TREPA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|238689335|sp|B2S3N6.1|SYS_TREPS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3322945|gb|AAC65620.1| seryl-tRNA synthetase (serS) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018447|gb|ACD71065.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|291060016|gb|ADD72751.1| seryl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Chicago]
gi|374677479|gb|AEZ57772.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374678549|gb|AEZ58841.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679618|gb|AEZ59909.1| serine--tRNA ligase [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|374680679|gb|AEZ60969.1| serine--tRNA ligase [Treponema pallidum subsp. pallidum DAL-1]
gi|408475872|gb|AFU66637.1| serine--tRNA ligase [Treponema pallidum subsp. pallidum str. Mexico
A]
Length = 426
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++IR+N +AV N++ RN +A+++ ++ LY++ + + E+ L+ RN A MK
Sbjct: 2 LDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNENAQTMKSS 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L+ R +E G+ LK+ + E LV+++D+L Q +PNMTH P G D +
Sbjct: 62 LDALARSACVETGRALKDRIAHSERLLVQISDQLLSATQALPNMTHMCTPHGRSDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G P F+F +DH +L + LDI DF+A +VSG KFYYLK E V+LE LI + L
Sbjct: 122 IKRCGVPPCFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALIMFGLQ 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +RGF P TP+I R +V GF PRG+ + +Y IEG +CL+ TAEI +G H
Sbjct: 182 FLQERGFVPFLTPDIAREGMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLGAYHAGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L E LP YA SHCFR EAGAAG +RGLYRVHQF+KLEMF +C P +S+ HE L
Sbjct: 242 VLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSECLHERLR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE+++++L + F+++
Sbjct: 302 SLEEEIFTALEIPFRVV 318
>gi|108803927|ref|YP_643864.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
gi|123069166|sp|Q1AX26.1|SYS_RUBXD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|108765170|gb|ABG04052.1| seryl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
Length = 424
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 208/317 (65%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IR+N EAV N R+R A+++LV+EL ++ + +E++ LR +N +A + +
Sbjct: 2 LDLRYIRENAEAVKKNCRDRGVEADVDLVVELADRRSALIRELEGLRARQNQLAKAVAKE 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+ R +LIEE + LK + EE+L + + L +E IPNMTHP+ PVG +D +
Sbjct: 62 RDERSRGRLIEESRELKGLIPRREEELRGVEERLAEEQLKIPNMTHPEAPVGRDDSENVE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F F KDH +LG+AL I DFDA A+ +GSKFY+L+ EAV+LE+GL+ + L
Sbjct: 122 IRRWGEAPEFGFEPKDHVELGEALGIIDFDAGAKTTGSKFYFLRGEAVLLELGLVRFALD 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ RG+ TP++ R ++ GF PRG TQ+YS+E D LI TAEI + G +D
Sbjct: 182 LLAGRGYELAMTPDLARDRMLLGTGFVPRGPETQIYSVENTDLSLIATAEITLAGQLVDE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I++E LP ++A SHCFRTEAGA G A+RGLYRVHQF+K+EMF F PE+S HEE++
Sbjct: 242 IVAEESLPRRFAGLSHCFRTEAGAHGRASRGLYRVHQFTKVEMFAFTTPEQSGEMHEEML 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE+++ +L + ++++
Sbjct: 302 SIEEEIFRTLEIPYRVV 318
>gi|381205844|ref|ZP_09912915.1| seryl-tRNA synthetase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 421
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 207/317 (65%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D + IR + +S N R RN + +LE E +++ E+D LR+ RN ++N+M+ K
Sbjct: 2 LDLRVIRQDPAKISENCRLRNLPDLVAPLLEQDELARSLKGELDMLRQRRNEISNQMRAK 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
L E+Q LIEE K+LK+ L E IPN+THPD P+G E+ + +
Sbjct: 62 LSTDEKQILIEESKSLKQNEEVLNVAHQSAEFERGNLLSQIPNLTHPDSPIGTDEEANKV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +G P +F+F KDH L ++L++ DF+ ++V G KFYYLKN+AV LE+ L + L
Sbjct: 122 IREIGKPRIFDFEPKDHLALMESLELVDFEGGSKVVGQKFYYLKNQAVFLELALAQYALK 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT TP++ R+SVV+ GFQPRG + Q+YS+E ++ CLI TAEI +GG+ +
Sbjct: 182 LLQDEGFTVHITPDLARASVVQGTGFQPRGDSAQIYSLENSELCLIATAEITLGGLLSEQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
ILS+ LP+ A FSHCFRTEAGAAG +RGLYRVHQFSK+EMF F PE+S+ HE+L+
Sbjct: 242 ILSDDELPILMAGFSHCFRTEAGAAGRESRGLYRVHQFSKIEMFAFTHPEKSNEMHEKLL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+IEE +Y LG+ ++++
Sbjct: 302 KIEERIYCDLGIPYRVV 318
>gi|187918098|ref|YP_001883661.1| seryl-tRNA synthetase [Borrelia hermsii DAH]
gi|119860946|gb|AAX16741.1| seryl-tRNA synthetase [Borrelia hermsii DAH]
Length = 441
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/317 (45%), Positives = 206/317 (64%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN E + NI++R NL+L++ ++ + ++ L RN AN MK K
Sbjct: 19 LDLKFIRDNLELIQKNIKDRGLKLNLDLLISFDDERRKLVTKIGELNAARNENANAMKEK 78
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
++ S R LIE GK LK + LEE L + L E + IPN+ PDVPVG GED +++
Sbjct: 79 MDDSRRNYLIETGKALKSEIAVLEEKLNYIASRLLIEHKQIPNIAAPDVPVGEGEDGNVV 138
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K GN F+F KDH +G LD+FDF+ A EVSG+KFYYLKNEAV LE+ LIN+ L+
Sbjct: 139 LKLSGNIPKFDFKPKDHLAIGIDLDLFDFERAGEVSGNKFYYLKNEAVFLELALINFALN 198
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GTAEI +GG + ++
Sbjct: 199 KLKLKGFDLFITPDVAREFIVDGIGFNPRGTESNIYKIEDTDKYLVGTAEITLGGYYYNT 258
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL PL+ A SHCFR EAGAAG ++GLYRVHQFSK+EMF C+ E+SD H E +
Sbjct: 259 ILDLK-SPLRMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCLCKSEDSDRIHNEFL 317
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE++++ L + +++L
Sbjct: 318 ALEEEIFTELEIPYRVL 334
>gi|168700966|ref|ZP_02733243.1| seryl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 431
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 203/324 (62%), Gaps = 12/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D +I DN +AV N +NR S+ ++ V+ +K +KE++R R E A N++
Sbjct: 2 LDAGFICDNADAVKLNCKNRGVSDVAVDRVIAFEQK----RKELERTRGETAAKKNEISK 57
Query: 134 KLEPS----ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED 189
K + E+Q L ++G + + + ++ +L + D+L IPNMTHP PVGGED
Sbjct: 58 KFPTAKTAEEKQALKDQGAAVDKEVGVIDAELKIVKDDLTLNLLQIPNMTHPAAPVGGED 117
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+F KDH L +ALD+ DF+A +V+G KFY+LKNEA +LE+ L+
Sbjct: 118 ANKVVAQFGEPRAFDFKPKDHVDLCEALDLADFEAGTKVAGQKFYFLKNEAALLEIALVQ 177
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN---TQVYSIEGADQCLIGTAEIPV 306
+ + +K G+TP+ TP++ R V+E GF PR N QVY++ D CLI TAEI +
Sbjct: 178 YAMQTAVKAGYTPIITPDLARVEVLEGIGFMPRDPNPDTRQVYTVADTDLCLIATAEITL 237
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
GG+H D I E+ LP +Y SHCFRTEAGAAG TRGLYRVHQF+K+EMF FC PE SD
Sbjct: 238 GGMHRDRIFDEAELPKRYVGLSHCFRTEAGAAGRDTRGLYRVHQFTKVEMFAFCTPETSD 297
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ HEE+ +EE ++ LGL F ++
Sbjct: 298 AIHEEIRALEEKIFQGLGLCFHVI 321
>gi|203284145|ref|YP_002221885.1| seryl-tRNA synthetase [Borrelia duttonii Ly]
gi|238690556|sp|B5RL50.1|SYS_BORDL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|201083588|gb|ACH93179.1| seryl-tRNA synthetase [Borrelia duttonii Ly]
Length = 424
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 194/296 (65%), Gaps = 2/296 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN E V NI+NR L+L++ ++ + ++ L RN AN MK
Sbjct: 2 LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKDN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
++ S R LIE+GK LK ++ LEE L LT L E + IPN++ PDVPVG ED +++
Sbjct: 62 IDDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K GN F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ +IN+ S
Sbjct: 122 LKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRGA + +Y IE D+ L+GTAEI +GG + ++
Sbjct: 182 KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNT 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
IL PLK A SHCFR EAGAAG ++GLYRVHQFSK+EMF FC+ E+SD H
Sbjct: 242 ILDLK-SPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRIH 296
>gi|219684738|ref|ZP_03539681.1| seryl-tRNA synthetase [Borrelia garinii PBr]
gi|219672100|gb|EED29154.1| seryl-tRNA synthetase [Borrelia garinii PBr]
Length = 425
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/318 (44%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+DFK+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDFKFIRDNLDLVKKSIKARGLVLDIDKLVSLDDKRKKIITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + L+E GK LK+ L+ LEE+L K++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDNVLKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP+I R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|338706601|ref|YP_004673369.1| serine--tRNA ligase [Treponema paraluiscuniculi Cuniculi A]
gi|335344662|gb|AEH40578.1| serine--tRNA ligase [Treponema paraluiscuniculi Cuniculi A]
Length = 426
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 200/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D+++IR+N +AV N++ RN +A+++ ++ LY++ + + E+ L+ RN A MK
Sbjct: 2 LDYRFIRENVDAVKENVKVRNVHADVDAIVHLYDQRVKLLAELQELQRARNENAQAMKNS 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L+ R +E G+ LK+ + LV+++D+L Q +PNMTH P G D +
Sbjct: 62 LDALARSACVETGRALKDRIAHSGRLLVQISDQLLSATQALPNMTHMCTPHGRSDSDNLE 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G P F+F +DH +L + LDI DF+A +VSG KFYYLK E V+LE LI + L
Sbjct: 122 IKRCGVPPRFSFSPRDHVELARLLDIVDFEAGKKVSGIKFYYLKREGVLLEQALIMFGLQ 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +RGF P TP+I R +V GF PRG+ + +Y IEG +CL+ TAEI +G H
Sbjct: 182 FLQERGFVPFLTPDIAREDMVCGLGFNPRGSGSNIYRIEGEHRCLVATAEITLGAYHAGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L E LP YA SHCFR EAGAAG +RGLYRVHQF+KLEMF +C P +S+ HE L
Sbjct: 242 VLEERSLPRLYAGLSHCFRKEAGAAGQFSRGLYRVHQFTKLEMFAYCTPSDSECLHERLR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+EE+++++L + F+++
Sbjct: 302 SLEEEIFTALEIPFRVV 318
>gi|203287683|ref|YP_002222698.1| seryl-tRNA synthetase [Borrelia recurrentis A1]
gi|238690587|sp|B5RR43.1|SYS_BORRA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|201084903|gb|ACH94477.1| seryl-tRNA synthetase [Borrelia recurrentis A1]
Length = 424
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 193/296 (65%), Gaps = 2/296 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN E V NI+NR L+L++ ++ + ++ L RN AN MK
Sbjct: 2 LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKDN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+ S R LIE+GK LK ++ LEE L LT L E + IPN++ PDVPVG ED +++
Sbjct: 62 IGDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K GN F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ +IN+ S
Sbjct: 122 LKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRGA + +Y IE D+ L+GTAEI +GG + ++
Sbjct: 182 KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNT 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
IL PLK A SHCFR EAGAAG ++GLYRVHQFSK+EMF FC+ E+SD H
Sbjct: 242 ILDLK-SPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRIH 296
>gi|219685837|ref|ZP_03540645.1| serine--tRNA ligase [Borrelia garinii Far04]
gi|219672611|gb|EED29642.1| serine--tRNA ligase [Borrelia garinii Far04]
Length = 425
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/318 (44%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+DFK+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDFKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + L+E GK LK+ L+ LEE+L K++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDNVLKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP+I R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDIAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|386859451|ref|YP_006272157.1| seryl-tRNA synthetase [Borrelia crocidurae str. Achema]
gi|384934332|gb|AFI31005.1| Seryl-tRNA synthetase [Borrelia crocidurae str. Achema]
Length = 424
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 193/296 (65%), Gaps = 2/296 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN E V NI+NR L+L++ ++ + ++ L RN AN MK
Sbjct: 2 LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKNN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
++ S R LIE+GK LK ++ LEE L LT L E + IPN++ PDVPVG ED +++
Sbjct: 62 IDDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K GN F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ +IN+ S
Sbjct: 122 LKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRGA + +Y IE D+ L+GTAEI +GG + ++
Sbjct: 182 KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNT 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
IL PLK A SHCFR EAGAAG ++GLYRVHQFSK+EMF FC+ +SD H
Sbjct: 242 ILDLK-SPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSGDSDRIH 296
>gi|406991107|gb|EKE10665.1| hypothetical protein ACD_15C00217G0013 [uncultured bacterium]
Length = 423
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/317 (43%), Positives = 205/317 (64%), Gaps = 8/317 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V N +NR SN +++ L L ++ ++ ++ LR +RNA + K
Sbjct: 2 LDIKFIRENAELVRDNCKNRLSNVDIDEFLNLDAEIRKMETALEDLRAKRNAAS-----K 56
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+PS Q IEE K + + +EE+LV + ++ IPNMTHP+V V ED + +
Sbjct: 57 TKPSPEQ--IEEMKAVGAEIKVIEENLVPMKARFREIWMSIPNMTHPEVAVSLNEDDNPV 114
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
T P+VF+F DH QL + D+ DF+ A +VSG+KFYYLKNE ++E LI + L
Sbjct: 115 LDTFMEPTVFDFEALDHVQLAEINDLIDFERATKVSGAKFYYLKNELALMEFALIQYALQ 174
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+K+GF P +TP++ + V+E GF PRG +TQVY+IE +D CL+GTAEI +GG HMD
Sbjct: 175 IAMKKGFVPFSTPDLAKREVLEGLGFNPRGESTQVYNIENSDLCLVGTAEITMGGYHMDE 234
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L E LP KY A SHCFRTEAGA ++G++RVHQF+K+EMF + PE+S+ H E++
Sbjct: 235 VLDEKDLPKKYVAVSHCFRTEAGAYSKFSKGIFRVHQFTKIEMFQYVMPEKSEEAHREML 294
Query: 374 RIEEDLYSSLGLHFKLL 390
IE +++ L + F+++
Sbjct: 295 AIEREIFEGLQIPFRVI 311
>gi|348674131|gb|EGZ13950.1| hypothetical protein PHYSODRAFT_562384 [Phytophthora sojae]
Length = 496
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 204/329 (62%), Gaps = 10/329 (3%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
KA +D+K + +N +A N R R S + +LV +LY++ ++ + LR ERNA A ++
Sbjct: 59 KARLDYKKLVENVDAAVENGRKRFSEGDPQLVADLYQRQAKLRHSANLLRAERNAHAKQL 118
Query: 132 -----KGKLEPSERQKLIE----EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
K + +E Q+ E G+ LK + LE +L +++ +L+ EA IPN THPD
Sbjct: 119 GQAAAARKKQGAEAQEAFEALRVRGQELKREIAELEGELAQVSTQLELEALKIPNDTHPD 178
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VPVG E+ S + T G F F KDH+ L L++ D AA V+GSKF YL NE M
Sbjct: 179 VPVGAEEDSRVVLTHGEKPEFGFKPKDHYDLATELELLDTQTAARVAGSKFTYLCNEGAM 238
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
+E+ L++WTLS++ RGF + P++ +VE CGFQPRG TQ+YSI +D CL T+
Sbjct: 239 MEIALVHWTLSKLRARGFKVMFPPDVAHYKLVEGCGFQPRGEATQIYSIANSDLCLTATS 298
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EI + + + IL LPLKYA FSHCFRTE G G TRG+YR+HQFSK+EMF FC
Sbjct: 299 EITLAAMKSNEILPTPTLPLKYAGFSHCFRTEIGHGGRLTRGIYRIHQFSKVEMFAFCAN 358
Query: 363 E-ESDSYHEELIRIEEDLYSSLGLHFKLL 390
E ++ + +E++ I+ +Y+ LGLH++L+
Sbjct: 359 ETQAQEFFDEMVEIQTSMYAELGLHYELM 387
>gi|325186768|emb|CCA21315.1| seryltRNA synthetase putative [Albugo laibachii Nc14]
Length = 462
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 207/331 (62%), Gaps = 11/331 (3%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA 126
VKP+ +D+K + + E N+RNR +AN E V+ LY+ ++ E++ LR RN
Sbjct: 20 VKPR----LDYKKLTETLEEWVQNVRNRMCDANPERVVALYQHQRTLKTELNHLRARRNV 75
Query: 127 VANKMKG--KLEPSERQKLIEE----GKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
+K + L EE GK L+E ++ E+ L ++T EL+ EA +PN TH
Sbjct: 76 FVQHVKSTKSQHVATTNDLSEEMQRNGKQLRETIICKEKKLEQVTSELELEAMNLPNDTH 135
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEA 240
P+ P+G ED S + + G F+F VKDH L L + D + A+V+GSKF YL+NEA
Sbjct: 136 PNTPIGAEDASKLLVSYGQKPRFDFAVKDHSDLMHDLGLIDTISGAKVAGSKFIYLRNEA 195
Query: 241 VMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIG 300
MLE+ L+ +TL ++ RGF + P++ +SS++E CGFQPRG TQ+YSI +D CL
Sbjct: 196 AMLEIALVQYTLQKLRHRGFEIVFPPDVAQSSLIEGCGFQPRGEATQIYSIADSDLCLTA 255
Query: 301 TAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC 360
T+EI + G+ + IL + LPLKYAAFSHCFRTE G G TRG+YR+HQFSK+EMF FC
Sbjct: 256 TSEITLAGMKTNEILPTNDLPLKYAAFSHCFRTEIGHGGRPTRGMYRIHQFSKVEMFAFC 315
Query: 361 -QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S+ + +E++ I+ ++Y LGLHF ++
Sbjct: 316 ANVTQSEHFFQEMLTIQCEMYQELGLHFNVV 346
>gi|386853634|ref|YP_006202919.1| SerS protein [Borrelia garinii BgVir]
gi|365193668|gb|AEW68566.1| SerS [Borrelia garinii BgVir]
Length = 425
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITQIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + L+E GK LK+ L+ LEE+L K++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDNVFKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGIVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|51598487|ref|YP_072675.1| seryl-tRNA synthetase [Borrelia garinii PBi]
gi|67461723|sp|Q662D8.1|SYS_BORGA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51573058|gb|AAU07083.1| seryl-tRNA synthetase [Borrelia garinii PBi]
Length = 425
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITQIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + L+E GK LK+ L+ LEE+L K++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDNVFKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|224531827|ref|ZP_03672459.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
gi|224511292|gb|EEF81698.1| seryl-tRNA synthetase [Borrelia valaisiana VS116]
Length = 425
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSKMQRN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ R LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDEGLRISLIETGKILKKQLIDLEEELKRVSIDFDLENRRVPNILSPDVPIGNIEEDHFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSG+KFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVIPNFDFKPKDHLELGRDLDLLDFDRAREVSGNKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +VE GF PRG + +Y IEG D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDVAREFIVEGIGFNPRGNESNIYKIEGTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAG G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGTYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LGIQEQIFTELEIPYRVL 317
>gi|406830088|ref|ZP_11089682.1| seryl-tRNA ligase [Schlesneria paludicola DSM 18645]
Length = 425
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 200/318 (62%), Gaps = 2/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +++ DN E V N + R+ + NL+ +LEL E + +DR R+ +N +A + +
Sbjct: 2 LDLQFVCDNLETVRKNCQERHVDVNLDGLLELRESRSQMIVALDRDRQRQNEIAQAIPKE 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P RQ LIE+GK LK + LE L ++ ++ IPN+THPD P G E S
Sbjct: 62 KTPEARQALIEQGKALKLSVPGLELQLKEIEANIRSVLVTIPNLTHPDAPRGDEADSKAV 121
Query: 195 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE 254
+T G F F DH L + D+ D + A V+G FY+LKNEAV+LE+ L +T+ +
Sbjct: 122 RTWGEIPKFGFKPLDHVALAEKHDLIDLEGGARVAGHGFYFLKNEAVLLELALTQYTVQK 181
Query: 255 VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSI 314
+I+ GFT TTP++ + V+E G+QPRG TQ+YSI G D CL+ TAEI +GG+ D I
Sbjct: 182 LIQHGFTLHTTPDMAKMEVLEGTGYQPRGNETQIYSIAGMDLCLVATAEITLGGLLKDHI 241
Query: 315 LSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEEL 372
L S LP+K A SHCFRTEAGA G A+RG+YRVHQF+K+EMF F P E SD+ H E+
Sbjct: 242 LDASQLPIKMAGISHCFRTEAGAHGKASRGIYRVHQFTKVEMFGFTAPDVEASDALHREI 301
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ IEE+++ LG+ +++L
Sbjct: 302 VAIEEEVFQGLGIPYRVL 319
>gi|224534318|ref|ZP_03674896.1| serine--tRNA ligase [Borrelia spielmanii A14S]
gi|224514420|gb|EEF84736.1| serine--tRNA ligase [Borrelia spielmanii A14S]
Length = 425
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V ++I+ R +++ ++ L +K + ++ L +RN + KM+
Sbjct: 2 LDLKFIRDNLDLVKSSIKARGLVLDIDKLIYLDDKRKKIITKISELNAKRNENSYKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + LIE GK LK+ L+ LE++L +++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDKVLKNSLIEGGKILKKQLIDLEKELERISIDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG S F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVVSKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFNVFITPDVAREFIVDGIGFNPRGDESNIYKIEDTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-SPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|111115050|ref|YP_709668.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|384206724|ref|YP_005592445.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|123341391|sp|Q0SNT6.1|SYS_BORAP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110890324|gb|ABH01492.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
gi|342856607|gb|AEL69455.1| seryl-tRNA synthetase [Borrelia afzelii PKo]
Length = 425
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSIIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|216263748|ref|ZP_03435742.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
gi|215979792|gb|EEC20614.1| seryl-tRNA synthetase [Borrelia afzelii ACA-1]
Length = 425
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 212/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSIIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|296121107|ref|YP_003628885.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
gi|296013447|gb|ADG66686.1| seryl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
Length = 452
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 210/319 (65%), Gaps = 3/319 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++I DN E ++ N +RN +L +LEL +K + + ++ D+ R + ++ +
Sbjct: 25 LDLQFICDNLELITKNCADRNVTIDLSRLLELRDKRIELIQQADQTRHAQKELSAAIPKV 84
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
+P+E+QKL+ EG+ L+E + T E ++ L++ +PN+THPD PVG ++ S +
Sbjct: 85 ADPAEKQKLVAEGRTLREKIATFETQQQEVEAALREIQAQVPNLTHPDAPVGPDETFSKV 144
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T G P F+F V+DH +L + D+ DF A +V+G FY+LKNEAV+LE+ L+ + +
Sbjct: 145 IRTWGTPKAFDFKVRDHVELAEICDLIDFQAGTKVAGHGFYFLKNEAVLLELALVQFAIQ 204
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+++ +GFTP TP++ R V+E G+ PRG TQ+YSI G D L+ TAEIP+GG D
Sbjct: 205 KLVAKGFTPYVTPDLARHEVLEGTGYNPRGNETQIYSINGTDLSLVATAEIPLGGSLKDE 264
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE--ESDSYHEE 371
IL LP++ A SHCFRTEAGA G A+RG+YRVHQF+K+EMF F P+ S++ HEE
Sbjct: 265 ILDIEQLPIRMAGLSHCFRTEAGAHGRASRGIYRVHQFTKVEMFAFTAPDLAASNAMHEE 324
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ IEE+++ LG+ +++L
Sbjct: 325 IVAIEEEVFQQLGIPYQVL 343
>gi|195941420|ref|ZP_03086802.1| seryl-tRNA synthetase [Borrelia burgdorferi 80a]
gi|216264477|ref|ZP_03436469.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223888685|ref|ZP_03623276.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225549035|ref|ZP_03770010.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|387825880|ref|YP_005805333.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
gi|215980950|gb|EEC21757.1| seryl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|223885501|gb|EEF56600.1| seryl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|225370261|gb|EEG99699.1| seryl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|312148176|gb|ADQ30835.1| seryl-tRNA synthetase [Borrelia burgdorferi JD1]
Length = 425
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 210/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENSSKMQEN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRIL 317
>gi|224532643|ref|ZP_03673264.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
gi|224512423|gb|EEF82803.1| serine--tRNA ligase [Borrelia burgdorferi WI91-23]
Length = 425
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 210/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENSSKMQEN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNVLSPDVPIGSSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRIL 317
>gi|15594571|ref|NP_212360.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218249339|ref|YP_002374749.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221217803|ref|ZP_03589271.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224533697|ref|ZP_03674285.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225550215|ref|ZP_03771175.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226321544|ref|ZP_03797070.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|387827142|ref|YP_005806424.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
gi|3915062|sp|O51244.1|SYS_BORBU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226701651|sp|B7J1F4.1|SYS_BORBZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2688129|gb|AAC66622.1| seryl-tRNA synthetase [Borrelia burgdorferi B31]
gi|218164527|gb|ACK74588.1| seryl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|221192480|gb|EEE18699.1| seryl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224512990|gb|EEF83353.1| seryl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225369327|gb|EEG98780.1| seryl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|226232733|gb|EEH31486.1| seryl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|312148980|gb|ADQ29051.1| seryl-tRNA synthetase [Borrelia burgdorferi N40]
Length = 425
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 210/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITKIGELNAKRNENSSKMQEN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRVL 317
>gi|410678989|ref|YP_006931391.1| seryl-tRNA synthetase [Borrelia afzelii HLJ01]
gi|408536377|gb|AFU74508.1| seryl-tRNA synthetase [Borrelia afzelii HLJ01]
Length = 380
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/317 (42%), Positives = 210/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ DVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSFDFDLENKRVPNILSSDVPIGNSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSIIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRVL 317
>gi|225552155|ref|ZP_03773095.1| seryl-tRNA synthetase [Borrelia sp. SV1]
gi|225371153|gb|EEH00583.1| seryl-tRNA synthetase [Borrelia sp. SV1]
Length = 425
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 210/317 (66%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L K + ++ L +RN ++KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDYKRKKLITKIGELNAKRNENSSKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLREKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRVL 317
>gi|226321201|ref|ZP_03796738.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805]
gi|226233398|gb|EEH32142.1| seryl-tRNA synthetase [Borrelia burgdorferi 29805]
Length = 425
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 208/317 (65%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + + L +RN + KM+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKLITIIGELNAKRNENSYKMQEN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
L+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G E+ +
Sbjct: 62 LDKVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKKVPNILSPDVPIGSSEEDNFE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+
Sbjct: 122 IKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 182 KLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNK 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E +
Sbjct: 242 IIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
I+E +++ L + +++L
Sbjct: 301 SIQEQIFTELEIPYRIL 317
>gi|343127544|ref|YP_004777475.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
gi|342222232|gb|AEL18410.1| seryl-tRNA synthetase [Borrelia bissettii DN127]
Length = 425
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 211/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN +++M+
Sbjct: 2 LDLKFIRDNLDLVKRSIKARGLVLDIDKLIYLDDKRKKIITKIGELNAKRNENSSRMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
+ + LIE GK LK+ L+ LEE+L +++ + E + +PN+ PDVP+G ED
Sbjct: 62 PDEVLKISLIETGKILKKQLIDLEEELERVSVDFDLENKRVPNILSPDVPIGSSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGVVPKFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP++ A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|281200603|gb|EFA74821.1| hypothetical protein PPL_11854 [Polysphondylium pallidum PN500]
Length = 2954
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 208/325 (64%), Gaps = 7/325 (2%)
Query: 70 QWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN 129
Q K ++F++I+DN+ + N + RN+ +++ ++ Y++ V++E+D +R+++N VA
Sbjct: 784 QLKPTVNFQYIKDNQVELQENAKKRNTLVDIQSIVAKYDEYRVVKREIDAVRKQKNDVAA 843
Query: 130 KMKGK-LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+K K L ERQ LI++GK +K+ L +E L +EL EA IPN THPD P+G E
Sbjct: 844 AVKQKSLSKEERQALIDQGKQVKDRLAEMEISHDTLFNELTSEALKIPNNTHPDSPIGPE 903
Query: 189 DCSIIRKTVGNPSVFN--FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D ++ VG FN F KDH +LG++L + A+ +G K+YY +A MLEM
Sbjct: 904 DKAVTVLNVGKIPEFNDGFQPKDHVELGESLGLLK--PASHTTGHKYYYFTRDAAMLEMA 961
Query: 247 LINWTLSEV-IKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
L W S + +K GFTP+ TP++V ++ E CGFQPR TQ+Y + + CL TAEIP
Sbjct: 962 LSYWAFSTMQLKYGFTPIITPDVVHPALAEACGFQPRSEATQLYWMRDHELCLTATAEIP 1021
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ GIH +S+L ++ LPLK +SHCFR E G G +G+YRVHQFSK+EMFV PE+S
Sbjct: 1022 MAGIHSNSVLDQAELPLKMVGYSHCFRAETG-RGVINKGIYRVHQFSKVEMFVISTPEQS 1080
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+S +EL+ I+ +++SSL L F++L
Sbjct: 1081 ESILKELLDIQIEMFSSLELPFRVL 1105
>gi|325108605|ref|YP_004269673.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
gi|324968873|gb|ADY59651.1| seryl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
Length = 428
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 211/319 (66%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +++ DN + V+AN NR +L +L+L ++ + + D+LR E+ + K+ K
Sbjct: 2 LDLQFLCDNLDDVAANCENRGIKVDLSALLKLRDRRRELIAQGDQLRTEQKETSGKIP-K 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
E+ +LI GK L+E + +E++ ++ +EL+ +PNMTHPD PVG +D S+
Sbjct: 61 ASAEEKPQLIARGKELREQVNQIEQEQKQVEEELRGIQSQVPNMTHPDAPVGKTDDDSVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F F +DH +L ++ D+ D ++ ++V+G FYYLKNEAV+LE+ L+ + +
Sbjct: 121 VREWGDKPQFEFKARDHVELMESNDLLDLESGSKVTGHGFYYLKNEAVLLELALVQFAVE 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+++K GFT ++TP++ R+ V+E GF PRG Q+YS+E D L+ TAEI +GG+ D
Sbjct: 181 KLVKEGFTIISTPDLARNEVLEGVGFNPRGDEAQIYSVENTDLSLVATAEITLGGMLKDE 240
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE--SDSYHEE 371
IL E+ LP+K A SHCFRTEAGA G ATRG+YRVHQF+K+E+F F P+ SD YH+
Sbjct: 241 ILDEANLPVKTAGISHCFRTEAGAHGRATRGIYRVHQFTKVEIFGFTTPDTAVSDEYHQM 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++RIEE+++ LG+ +++L
Sbjct: 301 ILRIEEEIFQGLGIPYRVL 319
>gi|217967764|ref|YP_002353270.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|226701462|sp|B8E0R9.1|SYS_DICTD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|217336863|gb|ACK42656.1| seryl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 425
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
ID K +R+N E + NI RN +++ ++EL K ++QKE+D LR +RN ++ ++
Sbjct: 2 IDIKILRENPEIMKENIILRNLDPQKYDVDYIIELDAKRRSLQKELDNLRAQRNKISQEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
GK + ER+KLI+E K LKE + L ++ + EL +PN P P G ++
Sbjct: 62 -GKHQGEEREKLIKEAKILKEKIEELAKEYDNVEKELFSRLWQLPNFLSPKAPRGKDEKD 120
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ K G FNF KDH L D+ DF+ ++V+GS FYYLKNEAV+LE L
Sbjct: 121 NVEIKKWGEIKTFNFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFALFRL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++ GF TP++ R +++ GFQPRG Q+Y +E D LI TAEI +GG H
Sbjct: 181 VIDTLLPEGFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEITLGGYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL E LPLKY FSHCFRTEAGA G RGLYRVHQFSK E+F+ C+PE+S+ HE
Sbjct: 241 KDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ +EE ++ L + +++L
Sbjct: 301 YILGLEEKIFQKLEIPYRVL 320
>gi|149179060|ref|ZP_01857633.1| seryl-tRNA synthetase [Planctomyces maris DSM 8797]
gi|148842100|gb|EDL56490.1| seryl-tRNA synthetase [Planctomyces maris DSM 8797]
Length = 426
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 202/319 (63%), Gaps = 3/319 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++I +N+E + N RNR +LE + +L ++ + + D LR+E+ +V++++
Sbjct: 2 LDLQFICENQEVILENCRNRGIEVDLEQLSKLDQRRRELIVQGDNLRQEQKSVSSQIPKA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED-CSII 193
+ RQ LI +GK L+E + +E +L ++ L+ E +PN+ HPDVPVG ED + +
Sbjct: 62 ADNDARQPLIAQGKELREQISAIEIELREVESLLKSEQARVPNLAHPDVPVGKEDKANTV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F F DH L + D+ DF+A V+G FYYLKNEAV+LEM L + +
Sbjct: 122 VRMWGEKPAFEFTPLDHVALAEKHDLIDFEAGTRVAGHGFYYLKNEAVLLEMALCQYAMQ 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++++ GF +TP++ R ++E GF PRG TQ+YS+E D L+ TAEI +GG D
Sbjct: 182 KLVQEGFVLHSTPDLARKEILEGIGFNPRGDETQIYSVENTDLSLVATAEITLGGSMKDQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE--SDSYHEE 371
I+ LP K A SHCFRTEAGA G ATRG+YRVHQFSK+EMF F +P SD HEE
Sbjct: 242 IMDRETLPYKIAGLSHCFRTEAGAHGKATRGIYRVHQFSKVEMFAFTEPTNAASDKMHEE 301
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++RIEE+++ LGLH++++
Sbjct: 302 IVRIEEEIFQGLGLHYRVV 320
>gi|388491464|gb|AFK33798.1| unknown [Lotus japonicus]
Length = 265
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/151 (82%), Positives = 141/151 (93%)
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
M L+NWTLSEV+KRGFTP+TTPEIVRSSVVEKCGFQPR NTQ+YSIE +DQCLIGTAEI
Sbjct: 1 MALLNWTLSEVMKRGFTPITTPEIVRSSVVEKCGFQPRADNTQIYSIEDSDQCLIGTAEI 60
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
PVGG+HMDSIL++SLLPLKY AFSHCFRTEAGAAG ATRGLYRVHQFSK+EMFVFC+PEE
Sbjct: 61 PVGGLHMDSILADSLLPLKYVAFSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPEE 120
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
S+ YH+ELI+IEED++SSLGLHFK+L +E
Sbjct: 121 SEYYHQELIKIEEDIFSSLGLHFKILDMASE 151
>gi|421610977|ref|ZP_16052137.1| seryl-tRNA synthetase [Rhodopirellula baltica SH28]
gi|408498215|gb|EKK02714.1| seryl-tRNA synthetase [Rhodopirellula baltica SH28]
Length = 426
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 202/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 2 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E + +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 62 KDNDERQELIAKGRSLREQKDAAGAEQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 122 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 182 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL+Y SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 242 ILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 302 ELECEIFDALEVPYRVI 318
>gi|440719062|ref|ZP_20899496.1| seryl-tRNA synthetase [Rhodopirellula baltica SWK14]
gi|436435650|gb|ELP29479.1| seryl-tRNA synthetase [Rhodopirellula baltica SWK14]
Length = 426
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 202/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 2 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E + +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 62 KDNDERQELIAKGRSLREQKDAAGAEQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 122 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 182 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL+Y SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 242 ILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 302 ELECEIFDALEVPYRVI 318
>gi|403366713|gb|EJY83160.1| Seryl-tRNA synthetase [Oxytricha trifallax]
Length = 732
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 210/328 (64%), Gaps = 15/328 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN--ANLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
++FK + N+ NRN+ AN +LV LYE+ + E+D LR+ RN ++ +K
Sbjct: 9 LNFKDFNQKLPLIKQNVINRNAQKYANADLVNHLYEEYRKKRYEIDMLRKRRNEHSSALK 68
Query: 133 GKL---EPSERQKLIEE----GKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
L + +++KL+E GK+ K L E+DL + +L EA +PN THPD PV
Sbjct: 69 AILVMGDEEKKEKLMESHHKIGKSFKTDLQNYEKDLDNIELQLITEALKLPNKTHPDSPV 128
Query: 186 GGE-DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G E + +IR+ + K H ++G+ D+FDF A++++G+KF +LKNEA +LE
Sbjct: 129 GTELNNKVIRQN--SEKYKGLHKKSHLEIGEQFDLFDFQNASKLTGNKFVFLKNEAAILE 186
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
+ LIN+ +++V K+GFTP+TTP+ R+ VVE CGFQPR Q+Y ++ ++CLI T+EI
Sbjct: 187 LALINYAINKVGKKGFTPVTTPDFARAHVVEACGFQPRDEAGQIYMLDNMNECLIATSEI 246
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP-- 362
P+ G+HM ++ + LP+KY +FSHCFR EAG G +++GLYR+HQFSK+EMF +
Sbjct: 247 PMAGMHMGELVKKDSLPVKYVSFSHCFRKEAG-RGESSKGLYRLHQFSKVEMFGLSEGDY 305
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
++S+ E + I+E++ SLGLH++LL
Sbjct: 306 QKSEDLLNEFVSIQEEIVESLGLHYRLL 333
>gi|326435386|gb|EGD80956.1| hypothetical protein PTSG_01539 [Salpingoeca sp. ATCC 50818]
Length = 491
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 203/330 (61%), Gaps = 12/330 (3%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN-- 129
+ +++FK RDN E ANIRNRN AN++ +E YE+ + + V++LR ERN + +
Sbjct: 57 RPSLNFKGWRDNLEYHRANIRNRNVEANVDAAVEAYEQYVAQLQRVEQLRHERNRLTDSI 116
Query: 130 -KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
KMK K + SE Q+L+ + K K L +E + + + + E IPN THPDVPVG E
Sbjct: 117 KKMKDK-KGSEFQELLRQSKQNKTILQEVESQMPWVEEAMLIEGLAIPNETHPDVPVGSE 175
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ + + +TV F F +DH + + ++ +F + A V+GS+FY+L + +LE L+
Sbjct: 176 EQATVLQTVNEAPSFCFEPRDHLAIAQPNNLINFRSGAAVTGSRFYFLHGKVALLEFALV 235
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY------SIEGADQCLIGTA 302
++ ++ + +RG+ P+T P+IV++ V E CGFQPR +Q+Y S+ A+ CL GTA
Sbjct: 236 HYAINFMTQRGYEPVTVPDIVKTRVAESCGFQPRDDASQIYHLDQQHSVGQAELCLAGTA 295
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EIP+ G+ M +S L KY A H FR EAG AG RGLYRVHQF+K E+FV
Sbjct: 296 EIPLAGMWMGHTFDDSELTKKYIAVGHAFRCEAGGAGATNRGLYRVHQFTKAELFVISPG 355
Query: 363 --EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E S H+E+++ + DL++SLGLHFK+L
Sbjct: 356 DLETSCGLHDEMLQDQIDLFASLGLHFKVL 385
>gi|161579037|ref|NP_864198.2| seryl-tRNA synthetase [Rhodopirellula baltica SH 1]
gi|46577192|sp|Q7UXX6.2|SYS_RHOBA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
Length = 426
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 2 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 62 KDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 122 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 182 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL+Y SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 242 ILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 302 ELECEIFDALEVPYRVI 318
>gi|32396907|emb|CAD71875.1| seryl-tRNA synthetase [Rhodopirellula baltica SH 1]
Length = 442
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 18 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 77
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 78 KDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 137
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 138 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 197
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 198 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 257
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL+Y SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 258 ILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 317
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 318 ELECEIFDALEVPYRVI 334
>gi|417302894|ref|ZP_12089973.1| seryl-tRNA synthetase [Rhodopirellula baltica WH47]
gi|327540801|gb|EGF27366.1| seryl-tRNA synthetase [Rhodopirellula baltica WH47]
Length = 426
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 2 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 62 KDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 122 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 182 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL+Y SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 242 ILASEELPLRYCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 302 ELECEIFDALEVPYRVI 318
>gi|449132822|ref|ZP_21768822.1| seryl-tRNA synthetase [Rhodopirellula europaea 6C]
gi|448888057|gb|EMB18394.1| seryl-tRNA synthetase [Rhodopirellula europaea 6C]
Length = 426
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 201/317 (63%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N + V+ N R + +++ + L + ++ K+ + L + N V+ ++K
Sbjct: 2 LDRKFILQNAQLVAENSAKRGVSVDVDAICRLEAERMDALKQAEELNRQANEVSKQIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ERQ+LI +G++L+E +L E+ + +PNMTHPDVP GGE D + I
Sbjct: 62 KDNDERQELIAKGRSLREQKDAAGAAQDRLEAEILELQTILPNMTHPDVPEGGEHDANEI 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +F DH QLG+ D+FDF+ A V+GS FY+L+N AV L++ L + +S
Sbjct: 122 GRGKTPVPEMDFQPLDHLQLGEKHDLFDFEGGARVAGSGFYFLRNAAVRLDLALQQFAIS 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +GFTP++TP++ +SV++ GF PRG TQ+YSIE + L+ TAEIP+GG+
Sbjct: 182 HLAGKGFTPVSTPDLALTSVLQGTGFNPRGPETQIYSIENTELNLVATAEIPLGGMLSGQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL+ LPL++ SHCFRTEAGAAG A++GLYRVHQF+K+EMF F P++S + HEE+
Sbjct: 242 ILASEELPLRFCGLSHCFRTEAGAAGRASKGLYRVHQFTKVEMFAFTLPDQSTAMHEEMR 301
Query: 374 RIEEDLYSSLGLHFKLL 390
+E +++ +L + ++++
Sbjct: 302 ELECEIFDALEVPYRVI 318
>gi|66827607|ref|XP_647158.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|60475320|gb|EAL73255.1| seryl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 525
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 205/330 (62%), Gaps = 14/330 (4%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
K IDF++I+DN+ + NI R S LE +++ Y++ ++KE+D R +RN +A+KM
Sbjct: 52 KPRIDFQFIKDNENQIKENIIKRKSPVELEKLIKNYDEYRIIKKELDTFRAKRNEIASKM 111
Query: 132 K------GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
K G+ ++R +L+E+GK +KE L+ LEE +E+ EA IPN THP VP+
Sbjct: 112 KLMMKGGGESNKNDRLELVEQGKQVKEDLIALEEKHDIYFNEITSEALKIPNNTHPSVPI 171
Query: 186 GGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
G E + I K VG + + P+KDH +LG++L + +A++ +G K+YY E M
Sbjct: 172 GAESNANIIKMVGEKPNYLKPDEPIKDHLELGESLGVIR--SASKTTGHKYYYFTREGAM 229
Query: 243 LEMGLINWTLSEVI-KRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGT 301
LEM L W S++ K GF + TP+++ ++ E CGF R Q++ I+ D CL T
Sbjct: 230 LEMALSYWAFSKLTYKYGFQSVITPDLIHPNLAEACGFHARSDADQLFWIKDRDLCLSAT 289
Query: 302 AEIPVGGIHMDS-ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC 360
+EIP+ G++ + L + LP+K +SHCFR EAG G +G+YRVHQFSK+EMF+
Sbjct: 290 SEIPLAGMYANEEPLQSAELPIKMVGYSHCFRPEAGR-GLQNKGIYRVHQFSKVEMFIIS 348
Query: 361 QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+P ES+ EEL++I+ +L+S LGLHF++L
Sbjct: 349 KPHESNEILEELLKIQIELFSELGLHFRVL 378
>gi|87310730|ref|ZP_01092857.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645]
gi|87286487|gb|EAQ78394.1| seryl-tRNA synthetase [Blastopirellula marina DSM 3645]
Length = 426
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 198/318 (62%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++ DN + V N R R +A++ V L Q+E + N + K+ GK
Sbjct: 2 LDRKFVLDNVDLVQENCRLRGVDADVAKVAALETARRQKQQETEDFNRRANETS-KLIGK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII- 193
ER ++IEEG+ L+E ++++ +L E+ + IPN+THP P+G +D + +
Sbjct: 61 ASAEERPQIIEEGRKLREEKDAAQKEVDRLDAEIVDLLRLIPNLTHPAAPIGADDQANLE 120
Query: 194 -RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
R+ P F+F V DH +LG+ LD+ DF++ A+V+G+ FY+LKNEAV+LE+ L + L
Sbjct: 121 LRRGKTEPRKFDFKVLDHVELGENLDLIDFESGAQVAGAGFYFLKNEAVLLELALQRYVL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++K GFTP TP++ R+ ++ GF PRG TQ+YS+E D L+ TAEI +GG++
Sbjct: 181 EILMKEGFTPTITPDLARTEILHGVGFIPRGPETQIYSVENTDLNLVATAEITLGGMNAG 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
+L LP Y SHC+RTEAG+AG A+RGLYRVHQF+K+EMF F P++SD+ ++
Sbjct: 241 KVLEAEDLPKLYCGMSHCYRTEAGSAGRASRGLYRVHQFTKVEMFAFTLPDQSDATLDKF 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+E ++ LG+ ++++
Sbjct: 301 CDLECQIFDGLGIPYRVV 318
>gi|440792825|gb|ELR14033.1| serine-tRNA ligase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 534
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 207/336 (61%), Gaps = 21/336 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK- 132
+D KW++++ + ++ +IR R A++ + L+++ + + E+ ++R +RN V +++K
Sbjct: 70 LDLKWMKEHADELATSIRARKIEGADIHRTVALHDRFVRLDFEIQQMRAQRNRVTDELKQ 129
Query: 133 ------------GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
G ++ ++L+ +GK L+E L E+++ ++ EL +EA+ IPN+ H
Sbjct: 130 LKKKMNNKSLKGGDGNDADVERLVAQGKELREQLHAAEKEVKEVEAELYREAKRIPNVCH 189
Query: 181 PDVPVGGEDCSIIRKTVGNPSV------FNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
P VP G ED + + G P+ F F DH L + LD+ +F+A + V+G+ F
Sbjct: 190 PAVPHGSEDQARV-VCHGGPAKKQHAADFGFEPVDHVTLCQRLDLANFEAGSRVAGNNFV 248
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA 294
+ +NEA ++E+ L+ W + + RGFTP+ TP++VR E CGFQPRG TQ YSIEG+
Sbjct: 249 FFRNEAALMELALVQWVMGKAAARGFTPVLTPDVVRPVTAEGCGFQPRGTGTQTYSIEGS 308
Query: 295 DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
D CL+ T+E+ + G + L LP++ AFSHCFR EAG G RGLYR+HQFSK+
Sbjct: 309 DLCLVATSELALAGYYQMCALPPESLPVRMVAFSHCFRAEAGGTGLRDRGLYRLHQFSKV 368
Query: 355 EMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+F PE+SD E ++++++++++ LGLH+++L
Sbjct: 369 ELFALTAPEQSDDVLESIVQLQQEIFTELGLHYRVL 404
>gi|283780181|ref|YP_003370936.1| seryl-tRNA synthetase [Pirellula staleyi DSM 6068]
gi|283438634|gb|ADB17076.1| seryl-tRNA synthetase [Pirellula staleyi DSM 6068]
Length = 427
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 197/317 (62%), Gaps = 1/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I DN + N +R ++ +++L + ++ +V L + N VA +
Sbjct: 2 LDRKFIVDNVSLIQQNCTSRGVTCEVDRLVDLETRRRDIASQVQELNRQANEVAKSIGKA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSII 193
+ ER++ E+G+ L++ + +L +L ++ IPN+THPD PVGGE D +
Sbjct: 62 KDAEEREQRKEDGRRLRDQKDAAQAELDRLETQIHAIQITIPNLTHPDAPVGGEADARDV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ V F +DH +L + + DFD+ A V+G FY+LKNE V+LE+ L + L
Sbjct: 122 KLGVTPIRPLGFKARDHVELSEKCQLIDFDSGARVAGHGFYFLKNEGVLLELALERYALE 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+++RGFTP TTP++ R ++ GF PRG TQ+YSIE +D L+GTAEI +GG++ D
Sbjct: 182 ILMRRGFTPTTTPDLAREEILVGIGFNPRGPETQIYSIENSDLSLVGTAEITLGGMYADQ 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+ LP+K A SHCFRTEAGAAG A+RG+YRVHQF+K+EMF F P++SD+ HEEL+
Sbjct: 242 TVDLEQLPIKLAGISHCFRTEAGAAGKASRGIYRVHQFTKVEMFAFTLPDQSDAMHEELL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
IE +L+ LG+ ++++
Sbjct: 302 EIECELFDGLGIPYRVI 318
>gi|406986383|gb|EKE06986.1| hypothetical protein ACD_18C00219G0002 [uncultured bacterium]
Length = 419
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 202/319 (63%), Gaps = 13/319 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E + N NR N++ +L+L ++ E++ LR +RN + KGK
Sbjct: 2 LDIKFIRENSELIKQNCVNRRVKINIDSLLDLDKQKREKMTEIEELRAKRNTGS---KGK 58
Query: 135 LEPSERQKLIEEG---KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
E +++ E G K+L+E L T+EE + L LQ +PN+THP P+GGE+
Sbjct: 59 PTDEEIKQMREVGEKIKSLEEELKTIEESYLDLM--LQ-----VPNLTHPQSPIGGEEDF 111
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G F+FP KDH +L LD+ DF+ A+V+GSKFY++KN+ V L ++N+
Sbjct: 112 VTVEERGTIPNFDFPAKDHEELMLNLDLIDFERGAKVTGSKFYFVKNDMVRLNQAMLNYG 171
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + K G+ + TP++ + ++ GF PRG+ Q+Y+I+ L+GTAEI + G H
Sbjct: 172 MDILAKHGYNLVETPDLAKHEILLGAGFNPRGSEKQIYNIDDEGLSLVGTAEITMLGYHA 231
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D +L S P KYAA SHCFRTEAGA G ++GLYRVHQF+KLEMF+FC+PEES++ H+E
Sbjct: 232 DEVLDLSSGPKKYAAMSHCFRTEAGAYGRTSKGLYRVHQFTKLEMFIFCKPEESEALHQE 291
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ IE+++ L + ++++
Sbjct: 292 LLSIEKEICDGLEIPYRVI 310
>gi|167534977|ref|XP_001749163.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772316|gb|EDQ85969.1| predicted protein [Monosiga brevicollis MX1]
Length = 473
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 198/330 (60%), Gaps = 14/330 (4%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
K +DF+ +++ AV N R RN +L+LVL ++ +++ + +LR RN + +
Sbjct: 32 KTTLDFRTWKEDPAAVLQNARRRNVRLDLDLVLARHDAFTDLEYQSRQLRARRNEITADI 91
Query: 132 KGKLEPSE---RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K + + +Q L EE K+L+ L +E + EL QEA +PN THP VP +
Sbjct: 92 KSAHQAGDDAVKQALAEEAKSLRSRLADVEAERDATYLELMQEALHVPNHTHPAVP---D 148
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ + + VG+ VF+F +DH LG+ ++FDF+A A +G+ FYYLKN A LEM LI
Sbjct: 149 EEPTVLQVVGSKPVFDFEPRDHIALGEMHELFDFEAGARTTGTSFYYLKNAAAALEMALI 208
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-----EGADQ-CLIGTA 302
L+ ++ G+ P++ P++VR S+V CGFQPR +QVY + GA CL GTA
Sbjct: 209 QLALNRMMLAGYMPVSPPDVVRESLVAGCGFQPRDEASQVYELASKHASGAGTLCLAGTA 268
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EIP+ G++M + LPL AF FR EAG+ GTATRGLYRVHQFSK+E+F
Sbjct: 269 EIPLAGLNMQRTFAAEELPLNMVAFGRAFRCEAGSHGTATRGLYRVHQFSKVELFSIMPN 328
Query: 363 EE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
+E S++ HE+++ + L++ LGLHF++L
Sbjct: 329 DEALSNAMHEKILADQVQLFTDLGLHFEVL 358
>gi|395334441|gb|EJF66817.1| seryl-tRNA synthetase [Dichomitus squalens LYAD-421 SS1]
Length = 1050
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 200/339 (58%), Gaps = 20/339 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D++ I +N S N NR + ++ V LYE+ ++ + ++ R R+
Sbjct: 71 KPRLDYRDISENVVFKSHNAFNRKAPLPVGAVQTVARLYEEQKDLSQTLNAKRHARSVFG 130
Query: 129 NKMKG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
+++ +P ++Q +++E K LK + LE+ + +L DEL + IPN THP+VP+G
Sbjct: 131 ERIRTLAQDPQKKQAVLDEAKALKAEISELEDRVAQLEDELHTLSLAIPNDTHPEVPIGP 190
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E ++ T G + P +DH + +ALDI D +A A V+GS +YYLKNEA +LE+ L
Sbjct: 191 ESVAVTLSTHGPEPIPASPARDHVSICRALDILDLEAGATVTGSSWYYLKNEAALLELAL 250
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR----GANTQVYSI-EGADQC----- 297
N+ LS +K G+TP+TTP++VR+ + +CGFQPR GA +Q+Y + AD
Sbjct: 251 TNYALSIALKYGYTPVTTPDVVRADIARRCGFQPRDPVDGAASQMYHLAHTADPAALPSH 310
Query: 298 ------LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQF 351
L GTAEIP+ G+ + ILS S LP K H FR EAGA G TRGLYRVHQF
Sbjct: 311 GHPELVLAGTAEIPLAGMFANRILSASELPAKVVGLGHAFRAEAGARGADTRGLYRVHQF 370
Query: 352 SKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+KLE+FV E S + EE+ +++ +++ LGL F++L
Sbjct: 371 TKLELFVVSGEESSGAVMEEMRKMQAEIFEGLGLSFRVL 409
>gi|406901054|gb|EKD43820.1| hypothetical protein ACD_72C00104G0001 [uncultured bacterium]
Length = 411
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 197/316 (62%), Gaps = 7/316 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K+IR+N E + N NR+ +L+ +L+L E+ + K+V+ LR RN K KGK
Sbjct: 2 IDIKFIRENIELIKQNCLNRHVKLDLDKLLQLDEQRRVLLKQVEDLRAARN---QKSKGK 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
E K+ E G+ +K+ +E DL + E + +PN+THPD P+GGE+ +
Sbjct: 59 PTEEEITKMREVGEQIKQ----IETDLETVELEYKNYLMQVPNLTHPDSPIGGEEDYKVV 114
Query: 195 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE 254
N +F KDH +L D+ DF+ A+V+G+KFY+ KN V L M L+N+ +
Sbjct: 115 FQSPNAFKLDFTPKDHEELMVQNDLIDFERGAKVAGTKFYFTKNNLVRLNMALLNYGIDV 174
Query: 255 VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSI 314
K G+T + TP++ ++ ++ GF PRG TQ YSIE D LIGTAEI +GG H + +
Sbjct: 175 ATKHGYTLMETPDVAKNEILTGIGFNPRGNETQTYSIENTDLSLIGTAEITMGGYHSNEV 234
Query: 315 LSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIR 374
L + P KY A SHCFRTEAGA G +GLYRVHQF+KLEMFV+C+PE+S++ H+E++
Sbjct: 235 LDLTNGPKKYIAISHCFRTEAGAYGRTNKGLYRVHQFTKLEMFVYCKPEDSETLHQEILA 294
Query: 375 IEEDLYSSLGLHFKLL 390
IE+++ L L+++++
Sbjct: 295 IEKEIIDGLELNYRVI 310
>gi|408670853|ref|YP_006870924.1| seryl-tRNA synthetase [Borrelia garinii NMJW1]
gi|407240675|gb|AFT83558.1| seryl-tRNA synthetase [Borrelia garinii NMJW1]
Length = 425
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 210/318 (66%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V +I+ R +++ ++ L +K + ++ L +RN + KM+
Sbjct: 2 LDLKFIRDNLDLVKKSIKARGLVLDIDKLVYLDDKRKKIITQIGELNAKRNENSYKMREN 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCSI 192
L+ + L+E GK LK+ L+ LEE+L K++ + E + +PN+ PDVP+G ED
Sbjct: 62 LDNVFKSSLMETGKILKKQLIDLEEELKKISFDFDLENKRVPNILSPDVPIGNSEEDNFE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I+K VG F+F KDH LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L
Sbjct: 122 IKK-VGIVPKFDFKPKDHLDLGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + +
Sbjct: 181 NKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP+K A FSHCFR EAGA G ++GLYRVHQFSK+EMF FC+ EES H+E
Sbjct: 241 KIIDLT-LPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEF 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ I+E +++ L + +++L
Sbjct: 300 LSIQEQIFTELEIPYRVL 317
>gi|206901603|ref|YP_002251096.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
gi|238065098|sp|B5YEY8.1|SYS_DICT6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|206740706|gb|ACI19764.1| seryl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
Length = 425
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 198/320 (61%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN---LELVLELYEKMLNVQKEVDRLREERNAVANKM 131
ID K +R+N E + NI RN + N ++ +LEL K ++QKE+D L+ +RN ++ ++
Sbjct: 2 IDIKVLRENPELMKENIVLRNLDPNKYDVDYILELDAKRRSLQKELDTLKAQRNKISQEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
GK + ER++LI++ K LKE + LE++ K+ EL + +PN P P G ++
Sbjct: 62 -GKRKGEEREELIKKAKTLKEKIEELEKEYEKIEKELYLKLWQLPNFLSPKAPKGKDEKD 120
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
I K GN F F KDH L D+ DF+ ++V+GS FYYLKNEAV+LE L
Sbjct: 121 NIEIKRWGNIKTFTFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFALFRL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++ GF TP++ R +++ GFQPRG Q+Y +E D LI TAEI +GG H
Sbjct: 181 VIDTLLPEGFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEITLGGYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL E LPLKY FSHCFRTEAGA G RGLYRVHQFSK E+F+ C+PE+S+ HE
Sbjct: 241 KDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ +EE ++ L + ++++
Sbjct: 301 YILSLEEKIFQKLEIPYRVV 320
>gi|406993037|gb|EKE12257.1| hypothetical protein ACD_13C00249G0021 [uncultured bacterium]
Length = 411
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 199/318 (62%), Gaps = 12/318 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D +IR+N + V + N+ + ++ + VLEL EK + EV++LR +RN +A
Sbjct: 2 LDINFIRENVDLVKKGVSNKQFDPSIVDKVLELDEKRRKLLLEVEQLRAKRNRIA----- 56
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
E +K EEGK LKE L E +L K+ E ++ IPN+ PVG E ++
Sbjct: 57 -----EEKKPSEEGKKLKEELKDKEPELEKVQVEYKETLFKIPNLPSEKAPVGSSEKENV 111
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ GNP+ F F KDH ++GK L I DF+ A+V+GS+F++L + V+LE+ L N+ L
Sbjct: 112 EIRKWGNPTKFGFEPKDHLEIGKGLGILDFETGAKVTGSQFFFLYGDGVLLELALTNFVL 171
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++ KRG+ P+ TP++ +S G+ P+G Q Y+I+ D LI TAE+ + G H D
Sbjct: 172 DKLAKRGYLPVMTPDLAKSRYYLGTGYSPKGQEAQTYTIDDTDLGLIATAEVTLAGAHSD 231
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
++ E LPLKY +SHCFR EAGA G ++GLYRVHQF+K EMF++C+PEES+ +HEE+
Sbjct: 232 EVIPEGKLPLKYVGYSHCFRQEAGAYGKYSKGLYRVHQFTKTEMFIYCKPEESEKFHEEI 291
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +EE+++ L + ++++
Sbjct: 292 LSVEEEIFQDLEIPYRVV 309
>gi|384490361|gb|EIE81583.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 434
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 177/298 (59%), Gaps = 10/298 (3%)
Query: 103 VLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLV 162
V L+E+ ++++ + R+ER+ V ++ ER+ I + K+ KE L +EE LV
Sbjct: 14 VKNLFEEKTGLKQKAESFRQERDQVNQSIRSAKSKEERETYISKAKHWKEQLRQVEEKLV 73
Query: 163 KLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN-FPVKDHFQLGKALDIFD 221
K+ EL +A IPN THP PVG E + I KTVG P + F +KDH + + LD+ D
Sbjct: 74 KIESELVNQALLIPNDTHPQTPVGPEANAKILKTVGTPRRSSEFSLKDHLTIAENLDMVD 133
Query: 222 FDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQP 281
F+ AA V+GSKFYYLKN LE L + + + +GFTP+ P++VR+S+ CGFQP
Sbjct: 134 FEQAALVTGSKFYYLKNGGAWLEFALTQYAMHKAASKGFTPVLAPDLVRTSIAYGCGFQP 193
Query: 282 RGAN-TQVYSIEGADQ--------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFR 332
R +Q+Y + A CL+GTAEIP+ G+ +L E LP K FSH FR
Sbjct: 194 RKKEASQIYDVSTASTINTTAPKLCLVGTAEIPLAGMFAQKLLKEEELPKKLVGFSHSFR 253
Query: 333 TEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EAG RGLYRVHQFSK+E+F P +S+ +EL ++E+++S LGL F++L
Sbjct: 254 AEAGHGSAEERGLYRVHQFSKVELFTVTTPAQSEDMLQELRSLQEEMFSELGLCFRVL 311
>gi|392597750|gb|EIW87072.1| seryl-tRNA synthetase [Coniophora puteana RWD-64-598 SS2]
Length = 495
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 194/332 (58%), Gaps = 13/332 (3%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D++ I + S N NR + ++ + YE+ + E+D R RN++
Sbjct: 40 KPRLDYRAITEAATYKSHNAFNRKAPVPVGAIKSITRHYEERKAISGELDFKRHARNSIG 99
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+++ P E++ + EE K LK + LE L +L D+L + A +PN THP P+G E
Sbjct: 100 QRIRNTKTPEEKKSVTEEAKALKADIHLLEMRLSELDDKLLELALVVPNDTHPSTPLGPE 159
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ +++ T G + P +DH +G+AL +F F+A A V+GS +YYL+ EA +LEM L
Sbjct: 160 EAAVVLSTHGPEPLPCNPKRDHVSVGQALGLFGFEAGALVTGSSWYYLQAEAALLEMALT 219
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA----NTQVYSI------EGADQCL 298
N+ +S +K G+ P+ TP+++R+ + +CGFQPR ++Q+Y I D L
Sbjct: 220 NYAMSIAVKHGYQPVMTPDVIRADIATRCGFQPRDERDVLDSQMYHIAQNSSSSHPDLVL 279
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
GTAEIP+ G+H + +L ES LPL+ FR EAGA G TRGLYRVHQFSKLE+FV
Sbjct: 280 SGTAEIPLAGLHANRVLEESSLPLRMVGLGRSFRAEAGARGADTRGLYRVHQFSKLELFV 339
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
S++ E++ R++ +++ LG+ F++L
Sbjct: 340 LSTENASEAAMEDIRRVQVEIFEGLGIPFRVL 371
>gi|302844263|ref|XP_002953672.1| hypothetical protein VOLCADRAFT_82377 [Volvox carteri f.
nagariensis]
gi|300261081|gb|EFJ45296.1| hypothetical protein VOLCADRAFT_82377 [Volvox carteri f.
nagariensis]
Length = 516
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 193/329 (58%), Gaps = 12/329 (3%)
Query: 69 PQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
P ++A +DFK+I++N E V+ N +NR S+A+ V+ LY++ + ++ + D LR ERN +
Sbjct: 51 PSFRANLDFKFIKENVELVATNCKNRFSSADPHKVVALYDEFVALKTQADSLRAERNENS 110
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
N MKGKL+ +R LI G+ LK+ L +EE L ++ L E Q PN+THPDVP+ E
Sbjct: 111 NAMKGKLDAEKRAALIARGQQLKDQLAEVEELLTRVESSLHPEGQREPNLTHPDVPLERE 170
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ VG F+FP +DH L +ALD+ DF++AAEV+G KFYYL+N +LE+ L+
Sbjct: 171 EAQ-----VGAQRHFSFPPRDHVTLAEALDLVDFESAAEVTGQKFYYLRNAGALLELALV 225
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
N+ ++V+ RGFTP+ TP++V++SV+EKCGFQPRG TQV G + L+ E+ G
Sbjct: 226 NYAFNKVVSRGFTPIMTPDLVKASVLEKCGFQPRGTGTQVRVWWGTRRGLLRYREVGGTG 285
Query: 309 IHMDSILSESLL-PLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP----- 362
I ++ P + C R G + LY + F+ P
Sbjct: 286 IGLEKEEGPCRRDPGRAVKCPACGRGAVTVTGLQSLSLYVYFIGTHGACFLLISPPFFLS 345
Query: 363 -EESDSYHEELIRIEEDLYSSLGLHFKLL 390
S + H++LI IE +++ LGLHFK+L
Sbjct: 346 APSSSALHQQLIDIEAEMFEELGLHFKVL 374
>gi|196007454|ref|XP_002113593.1| hypothetical protein TRIADDRAFT_57175 [Trichoplax adhaerens]
gi|190583997|gb|EDV24067.1| hypothetical protein TRIADDRAFT_57175 [Trichoplax adhaerens]
Length = 477
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 208/348 (59%), Gaps = 25/348 (7%)
Query: 62 KGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLR 121
K G+ +P + DF + R + + NI+NR +A+++ V++L+ K + E+ LR
Sbjct: 29 KDGIGYRPIF----DFDYYRKKTDIIRENIKNRCCDADIDEVVKLHNKFGKICTEISALR 84
Query: 122 EERNAVANKMK---GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
ERN ++ K+K K + KL++ GK +KE + LE+ + ++L + A IPN
Sbjct: 85 HERNEISKKIKLQEVKKGEDDYVKLVDLGKKIKEKMPQLEDTKLHYENQLFEAASKIPND 144
Query: 179 THPDV-----------PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAE 227
THPD P+G E+ + I T G+ VF+ +K+H Q+G+ L++F +AA
Sbjct: 145 THPDTSHVELHFLLLKPIGDEENATILSTFGDKPVFDLDLKNHIQIGEKLNLFR--SAAL 202
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
S KF YL +A +LE+ +I + + ++ ++GFT + P+IV+ ++E CG+ PR + Q
Sbjct: 203 QSDPKFCYLLGDAALLELAIIQYAIQKLTQKGFTTILPPDIVKPRLIEGCGYHPRTEHAQ 262
Query: 288 VYSIEGA--DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGL 345
+YS++ + + L GT+EIP+ G+ MDS+L LPL+Y A SHCFR EA + RGL
Sbjct: 263 IYSLDPSHGELRLAGTSEIPLCGMFMDSMLDAKDLPLRYVAVSHCFRAEAARHTSEERGL 322
Query: 346 YRVHQFSKLEMFVFCQPE---ESDSYHEELIRIEEDLYSSLGLHFKLL 390
YR+HQF+K+EMF E ESD+ E + I++DLYS+LGLH ++L
Sbjct: 323 YRLHQFTKVEMFGITTNEGHNESDALFNEFVEIQKDLYSNLGLHARIL 370
>gi|330842970|ref|XP_003293439.1| hypothetical protein DICPUDRAFT_8517 [Dictyostelium purpureum]
gi|325076224|gb|EGC30028.1| hypothetical protein DICPUDRAFT_8517 [Dictyostelium purpureum]
Length = 449
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 208/329 (63%), Gaps = 10/329 (3%)
Query: 69 PQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
P K I+F++I+DN +++ NI R S +LE +++ Y++ V+KE+D R +RN +A
Sbjct: 1 PYIKPRINFQFIKDNFKSIQENINIRKSGIDLESLIKNYDEYRIVKKELDFKRSKRNEIA 60
Query: 129 NKMKGKLE---PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
++MK L+ S+R +L+E+GK +KE +++LE+ KL + + E+ IPN THP+ P+
Sbjct: 61 SQMKSLLKNSPQSDRLQLVEQGKLVKEEVISLEKQHDKLFNHITLESLKIPNNTHPESPI 120
Query: 186 GGEDCSIIRKTVGNPSVF--NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
G E + + + V F + VKDH ++G+ + +A++ +G K+YY EA ML
Sbjct: 121 GPESSARVIQLVNEKPNFGSDQKVKDHLEIGEECGLIK--SASKTTGHKYYYFTREAAML 178
Query: 244 EMGLINWTLSEV-IKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
EM L W S++ K GFT + TP+++ ++ E CGF R Q++ I+ + CL T+
Sbjct: 179 EMALSFWAFSKLSYKYGFTSVITPDLIHPNLAEGCGFHARSDADQLFWIKDRELCLSATS 238
Query: 303 EIPVGGIH-MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
EIP+ G++ + + E+ LP+K +SHCFR E G G RG+YRVHQFSK+EMFV
Sbjct: 239 EIPLAGMYSHNEPIHENDLPIKMVGYSHCFRPEVGK-GAQNRGIYRVHQFSKVEMFVIST 297
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
PE+S+ E+L++I+ +L++ LGLHF++L
Sbjct: 298 PEQSNQILEDLLKIQLELFTDLGLHFRVL 326
>gi|149919214|ref|ZP_01907697.1| seryl-tRNA synthetase [Plesiocystis pacifica SIR-1]
gi|149819928|gb|EDM79350.1| seryl-tRNA synthetase [Plesiocystis pacifica SIR-1]
Length = 456
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 202/346 (58%), Gaps = 28/346 (8%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRN----------------SNANLELVLELYEKMLNVQKE 116
A +D K +R++ E ++AN+ +RN + A +E + +K+ ++
Sbjct: 2 AMLDIKLLREDPERIAANLHDRNVQVFPDLDSEQAGESWAKATVERLRAYDQKVRDLIAA 61
Query: 117 VDRLREERNAVANKMK--GKLEPSERQK----LIEEGKNLKEGLVTLEEDLVKLTDELQQ 170
D LR E+N ++ MK GKL E+Q LIE G+ L+E + E + +
Sbjct: 62 GDNLRREQNENSSAMKKVGKLAKDEQQAARTPLIERGRELREQEKQIAEQHAEAIAARDE 121
Query: 171 EAQCIPNMTHPDVPVGGEDCSIIR-KTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAA 226
+ +PN++HPDVP G D + +T G F F KDH + +ALD+ DF + A
Sbjct: 122 AWRRVPNLSHPDVPKGHTDDDHAQLRTWGERRDFAAEGFEPKDHLDIAEALDLVDFASGA 181
Query: 227 EVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT 286
+V+G KFYYL NEAV+L++ L + L K GF TTP++ R +++ GF PRG +T
Sbjct: 182 KVAGQKFYYLVNEAVLLDLALQRYALDMARKHGFKLHTTPDLARVDILDGLGFNPRGEST 241
Query: 287 QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLY 346
QVYS+ +D CL+GTAEI +GG+ D IL LPL A SHCFRTEAG+AG +RGLY
Sbjct: 242 QVYSVANSDLCLVGTAEITLGGMVADEILDPEQLPLLVAGLSHCFRTEAGSAGKESRGLY 301
Query: 347 RVHQFSKLEMFVFC--QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
RVHQF+K+E+F F + E S++ H+ ++ IEE+++ L + +++L
Sbjct: 302 RVHQFTKVELFAFTVGELELSEAMHQRMLDIEEEIFQGLEIPYRVL 347
>gi|389751172|gb|EIM92245.1| seryl-tRNA synthetase [Stereum hirsutum FP-91666 SS1]
Length = 495
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 200/356 (56%), Gaps = 14/356 (3%)
Query: 45 ARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN---ANLE 101
AR +SA A Q ++ G KP+ +D++ I +N S N NR +N ++
Sbjct: 17 ARFYSAKASQKSTSSSKTGTAIPKPR----LDYRSISENVVFKSHNAFNRRANLPVGAIQ 72
Query: 102 LVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDL 161
+ LY++ + + ++ + + + K++ +P +Q L+ E K LK + LE L
Sbjct: 73 SIDSLYQQHKTLARTLNDKKHIQGTIGEKIRSTKDPETKQSLLSEAKALKSEVSQLETQL 132
Query: 162 VKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFD 221
+ D L A +PN THP+ P+G E ++ T G + +DH +GK L + D
Sbjct: 133 DNIADRLLSLALAVPNDTHPETPLGPESAAVTLSTHGPEPLPISSSRDHVSVGKQLGLLD 192
Query: 222 FDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQP 281
+AAA V+GS +YYL E +LEM L+N+ LS I+ GFTP+TTP++VRS + +CGFQP
Sbjct: 193 LEAAATVTGSSWYYLLREGALLEMALVNYALSIAIRHGFTPVTTPDVVRSDIAYRCGFQP 252
Query: 282 RGAN-----TQVYSIEGA--DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTE 334
R + +Q+Y + + + L GTAEIP+ G+ + I + LP K FR E
Sbjct: 253 RDPSVDPPVSQMYHVSSSHPELVLAGTAEIPLAGLFANKIFNAGELPRKVVGLGRAFRAE 312
Query: 335 AGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
AGA G TRGLYRVHQF+KLE+F + E+SD EE+ RI+ +++ LGL F++L
Sbjct: 313 AGARGADTRGLYRVHQFTKLELFAVSEREQSDELMEEIRRIQLEIFEGLGLPFRVL 368
>gi|392571022|gb|EIW64194.1| seryl-tRNA synthetase [Trametes versicolor FP-101664 SS1]
Length = 490
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 207/368 (56%), Gaps = 28/368 (7%)
Query: 43 LLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN---AN 99
L +RAFS + +G A K +D++ I +N S N NR +
Sbjct: 6 LSSRAFS--------SAPERGPSASTSLPKPRLDYRDISENVFFKSHNAFNRKAALPVGA 57
Query: 100 LELVLELYEKMLNVQKEVDRLREERNAVANKMKG-KLEPSERQKLIEEGKNLKEGLVTLE 158
++ V LYE+ + + ++ R R+ V ++++ +P ++Q ++E K LK + LE
Sbjct: 58 VQTVARLYEEQKELSQTLNTKRHARSTVGDRIRSLAKDPQKKQAALDEAKALKAEISELE 117
Query: 159 EDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALD 218
L +EL A IPN THP VP+G E ++ T G + P +DH + +ALD
Sbjct: 118 NRAASLEEELHTLALAIPNDTHPAVPIGPESVAVTLSTHGPELIPASPARDHVAICRALD 177
Query: 219 IFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCG 278
+ D +A A V+GS +YYLKNE +LE+ L+N+ LS IK GFTP+TTP++VRS + +CG
Sbjct: 178 LIDLEAGATVAGSSWYYLKNEGALLELALVNYALSTAIKHGFTPVTTPDVVRSDIARRCG 237
Query: 279 FQPR----GANTQVYSI-----EGADQ-------CLIGTAEIPVGGIHMDSILSESLLPL 322
FQPR G +Q Y + GA + L GTAEIP+ G+ + ILS + LPL
Sbjct: 238 FQPRDPVDGTASQTYHLMHTTDPGAAENHNHPELVLAGTAEIPLAGMFANRILSATELPL 297
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
K H FR EAGA G TRGLYRVHQF+KLE+F + E+S+ EE+ +++ +++
Sbjct: 298 KVIGLGHAFRAEAGARGADTRGLYRVHQFTKLELFALSEEEKSEEMMEEMRKLQTEIFEG 357
Query: 383 LGLHFKLL 390
LGL F++L
Sbjct: 358 LGLSFRVL 365
>gi|406993397|gb|EKE12549.1| hypothetical protein ACD_13C00181G0003 [uncultured bacterium]
Length = 411
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 180/297 (60%), Gaps = 12/297 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D +IR+NKE V + + + +L + +LEL E+ + E++ LR +RN +A K K
Sbjct: 2 LDINFIRENKELVKKGVGAKGFDISLIDKILELDERRRKLLLEIEGLRAKRNRIAEKKK- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
PSE EGK +KE L E +L ++ E ++ IPN+ PVG D +
Sbjct: 61 ---PSE------EGKEIKEELKDKEPELAEVQKEYKELLFKIPNLPSRRSPVGKSDKENV 111
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F F KDH ++GK L I DF+ A+V+GS+FY+L + VMLE+ L N+ L
Sbjct: 112 ELRTWGEPKKFEFKPKDHLEIGKNLKILDFETGAKVAGSQFYFLYGDGVMLELALTNFVL 171
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++ K+G+ P+ TP++ +S G+ P+G Q Y+I D LI TAE+ + G H D
Sbjct: 172 DKLYKKGYQPVMTPDLAKSRYYLGTGYAPKGNEAQTYTICDTDLGLIATAEVTLAGAHAD 231
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
I+SE LP+KY +SHCFR EAGA G ++GLYRVHQF+K EMF++C+PE+S+ H
Sbjct: 232 EIISEEKLPMKYVGYSHCFRQEAGAYGKYSKGLYRVHQFTKTEMFIYCKPEDSERLH 288
>gi|406958449|gb|EKD86109.1| hypothetical protein ACD_37C00466G0002, partial [uncultured
bacterium]
Length = 299
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 180/297 (60%), Gaps = 12/297 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D +IR++K+ V + ++ + L + VL+L EK + EV+ LR RN +A
Sbjct: 2 LDINFIREHKDLVKKGVESKGFDITLIDKVLDLDEKRRKLLLEVEGLRARRNRIA----- 56
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E +K +EGK +KE L E L ++ +E ++ IPN+ PVG D
Sbjct: 57 -----EEKKPSDEGKKIKEELKDKEPKLEEIQEEYKEILFRIPNLPSKKSPVGRSDKENA 111
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F+F KDH ++GK L I DF+ A+V+GS+F++L + V+LE+ L N+ L
Sbjct: 112 EIRTWGEPKKFSFKAKDHLEIGKNLKILDFETGAKVTGSQFFFLYGDGVLLELALTNFVL 171
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++ K+G+ P+ TP++ +S G+ P+G Q Y+I+G D LI TAE+ + G H D
Sbjct: 172 DKLAKKGYLPVMTPDLAKSRYYLGTGYSPKGQEAQTYTIDGTDLGLIATAEVTLAGAHSD 231
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
I+ E LPLKY +SHCFR EAGA G ++GLYRVHQF+K EMF++C+PE+S+ +H
Sbjct: 232 EIIPEEKLPLKYVGYSHCFRQEAGAYGKYSKGLYRVHQFTKTEMFIYCKPEDSEKFH 288
>gi|406983815|gb|EKE04973.1| hypothetical protein ACD_19C00427G0020 [uncultured bacterium]
Length = 411
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 186/320 (58%), Gaps = 18/320 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRL---REERNAVANKM 131
+D K+IR+N + V ++ +N+ + + +K++ V E RL EE A NK+
Sbjct: 2 LDIKFIRENVDLVKSSTKNKGFDETV------VDKLIQVDIERRRLIGQTEEIRAKRNKL 55
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDC 190
+ IEEG+ LK L +EE L + E + +PN DV VG GE
Sbjct: 56 T--------KDDIEEGEKLKVELKEIEEKLKTVEVEFNELINLVPNPASSDVKVGKGEVE 107
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ I KT G + F F KDH ++GK L I DF+ A+VSGS+FYYL + MLE+ L+ +
Sbjct: 108 NEIIKTWGELTKFIFNPKDHVEIGKNLGILDFETGAKVSGSQFYYLYGDGAMLELALVQY 167
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K GF P+ TP++ +S G+ P+G Q Y I +D LI TAE+ + G H
Sbjct: 168 AFELLSKEGFRPVITPDLAKSKYYLGTGYAPKGVEAQTYEINDSDLGLIATAEVTLAGSH 227
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ++ ES LPLKY +SHCFR E G+ G +RGLYRVHQF+K EMF++C+PE+S +H+
Sbjct: 228 ADEVIPESALPLKYIGYSHCFRQEGGSYGKYSRGLYRVHQFTKAEMFIYCKPEDSLGFHD 287
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ +EE +Y LG+ +++L
Sbjct: 288 YLLEMEEKIYQGLGIPYRIL 307
>gi|291002089|ref|XP_002683611.1| seryl-tRNA synthetase [Naegleria gruberi]
gi|284097240|gb|EFC50867.1| seryl-tRNA synthetase [Naegleria gruberi]
Length = 489
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 210/350 (60%), Gaps = 38/350 (10%)
Query: 76 DFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL 135
+F+ + + ++ + NI+ R N +L+ VL+ YE+ + + +E ++++ R +A + GK
Sbjct: 34 NFEKMIEKQDEMKENIKLRELNIDLDQVLKNYEQYIQIDQEYEQVQYLRKEIAEYLAGKR 93
Query: 136 E----PSERQKLIEE-------------GKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
P E + LI+E GK K + LE+ ++ EL ++ +PN
Sbjct: 94 TSEQVPIEIKNLIKEDLENKKADSWKVIGKEFKTKIQNLEKIKNEVYQELCEKTVKLPNF 153
Query: 179 THPDVPVGGEDCSI---IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
T V ++ S + K VG P H+++ + LD+F+ A E SGSKF++
Sbjct: 154 TEEGVMKFSKENSNQPNLVKYVGEKKE-TIPKLSHYEICEKLDLFE--PANECSGSKFFF 210
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
LKNE V+LE+ L N+ +S+++KRGF + PE+++ S+VE CGFQPRG ++Q+Y IE ++
Sbjct: 211 LKNEGVLLEVALQNFAISKLLKRGFKIIMPPELMKQSIVEGCGFQPRGEHSQIYRIENSN 270
Query: 296 Q---------------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
Q CLIGT+EI + +H + + PLKYA SHCFRTEAGAAG+
Sbjct: 271 QEPTTTKNGETCNDSLCLIGTSEIGLAALHCNEFMPNFKGPLKYAGLSHCFRTEAGAAGS 330
Query: 341 ATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
RGLYRVHQF+K+EMFV+C+PE+S++ +E++ I+E+++S LG HF++L
Sbjct: 331 KDRGLYRVHQFTKVEMFVYCEPEQSEALLDEIVSIQEEIFSELGFHFQIL 380
>gi|393244588|gb|EJD52100.1| seryl-tRNA synthetase [Auricularia delicata TFB-10046 SS5]
Length = 549
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 189/323 (58%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D++ I +N S N NR S ++ V +LY++ +++ E++R R NA+ +++
Sbjct: 41 LDYRGIAENVVFKSHNAFNRKSGMPVGTVQNVEQLYKQSRDLESELNRRRAVHNAMISRV 100
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K ER LIE+ + LK + +E+ + L EL A IPN TH DVP+G E +
Sbjct: 101 K-DANKKERAALIEDARQLKAAVQEVEQQMDALDSELYTHASLIPNDTHVDVPIGPESAA 159
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I G + P +DH Q+ K L++ DFD+ A +G+ +YYL NE LE+ L N+
Sbjct: 160 NILSQHGPEPLPASPERDHVQIAKHLNLVDFDSGALSTGASWYYLINEGAQLELALTNYA 219
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT----QVYSIEGADQCLIGTAEIPVG 307
S +KRGF P TP++V++ V +CGFQPR + +Y ++ +D L GTAEIP+
Sbjct: 220 FSVALKRGFRPALTPDVVKADVAWRCGFQPRDDSDPPVHHMYHVQNSDLVLTGTAEIPLA 279
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ + +L LP++ A FR+EAGA G TRGLYRVHQFSK+E+F E+S+
Sbjct: 280 ALFANRVLDGDALPVRVAGLGRAFRSEAGARGADTRGLYRVHQFSKVELFAVTAAEQSED 339
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+EL +++ +L+S LGL F++L
Sbjct: 340 MLDELKQVQIELFSGLGLTFRVL 362
>gi|393218169|gb|EJD03657.1| seryl-tRNA synthetase [Fomitiporia mediterranea MF3/22]
Length = 426
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 173/279 (62%), Gaps = 10/279 (3%)
Query: 121 REERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
R R+ + +K++ ++ +E K+LKE + +LE+ L ++ D+L A IPN TH
Sbjct: 26 RHSRSTIGDKIRNS-NGEAKEVAKQEAKSLKEEISSLEQQLSEIDDKLYSLALTIPNDTH 84
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEA 240
PDVP+G E+ + I T G + + +DH +GKALD+FD + AA V+GS +YYL NE
Sbjct: 85 PDVPIGPEEAANIVATHGPKPIDSNLKRDHVSVGKALDLFDLEQAATVTGSSWYYLLNEG 144
Query: 241 VMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT----QVYSIEGADQ 296
+LEM L + LS+ + RGF P+TTP++V++ V +CGFQPR Q+Y ++ +
Sbjct: 145 ALLEMALTQYALSKAVARGFKPVTTPDVVKADVAMRCGFQPRDQGDPPVHQMYHLQNTNP 204
Query: 297 C-----LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQF 351
L GTAEIP+GG+ +S+ E LPLK FR+EAGA G TRGL+RVHQF
Sbjct: 205 AQPELVLSGTAEIPLGGLFANSVYQEEELPLKVVGLGRAFRSEAGARGADTRGLFRVHQF 264
Query: 352 SKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
SKLE+F C E S+ +E++ ++ D++S LGL ++L
Sbjct: 265 SKLELFAVCAQESSEDVMKEMVDLQVDIFSGLGLPLRIL 303
>gi|302531546|ref|ZP_07283888.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
gi|302440441|gb|EFL12257.1| seryl-tRNA synthetase [Streptomyces sp. AA4]
Length = 422
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 191/318 (60%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ EAV A+ R R + + + +L+L + + D+LR E+ +V+ ++
Sbjct: 2 IDPRTLREDPEAVRASQRARGEDEGVVDKLLDLDTRRRSAIATADKLRAEQKSVSKQVP- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ++ L+ K+L + E + + ++E Q + +PN+ HPD P+GGED +
Sbjct: 61 KASPEDKPALLARAKDLSAQVKAAEVEQNEASEEFDQLFRVLPNLVHPDAPIGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
KTVG F+F +DH L + L D + A+VSGS+FY+L L++ L+N ++
Sbjct: 121 LKTVGEVPTFDFAPRDHLDLMEGLGALDMERGAKVSGSRFYFLSGVGAQLQLALLNMAVA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
GFTP+ TP +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 RATANGFTPMITPSLVRPEIMAGTGFL--GAHSSEVYRLRDDDLYLVGTSEVPLAGYHSD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S C+R EAG+ G TRG+ RVHQF K+EMFVF +PE++++ HE L
Sbjct: 239 EILDLSAGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFVFAKPEDAEAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EED+ +++ + ++++
Sbjct: 299 LGWEEDMLAAIEVPYRVI 316
>gi|329938706|ref|ZP_08288102.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329302197|gb|EGG46089.1| seryl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 425
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 187/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRQLREDPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P E+ +L+ + + LK + + + + DE ++ + N+ HPDVPVGGE+ ++
Sbjct: 61 KASPEEKAELLRKAEQLKSDVKAADAEQHEAEDETRRLLLQLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + AA+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTVRDFGAEGFEPKDHLELGQALGAMDVERAAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPQAMEGTGFLGQAAEN-VYHLEKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF F P E+++ H
Sbjct: 240 MDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFTFVDPSEAENEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLDWEKQWLTSLELPFQVI 319
>gi|297200865|ref|ZP_06918262.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
gi|197716361|gb|EDY60395.1| seryl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
Length = 425
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 187/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + E DE ++ A + N+ HPDVPVGGE+ ++
Sbjct: 61 KATPEERAELLQKAEQLKADVKAAEAAQNDADDETKRLALQLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEILDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAENEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLDWEKQWLTGLELPFQVI 319
>gi|257054210|ref|YP_003132042.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256584082|gb|ACU95215.1| seryl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 421
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 191/318 (60%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ GK L + E + + ++E ++ +PN+ HPDVP GGED ++
Sbjct: 61 KASGEEREALLARGKELAAQVKEAEAEQNRASEEFEKLYNVVPNIVHPDVPEGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +LG+AL D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKRVGTPREFDFTPKDHLELGEALGAIDTERGAKVSGARFYFLTGVGAQLQLALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ +++GF + P +VR ++ GF GA+ ++VY + D L+GT+E+ + G H D
Sbjct: 181 QAVEKGFQLMIPPVLVRPEIMAGTGFL--GAHSSEVYRLADDDLYLVGTSEVSLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMF+FC+P E+++ HE+L
Sbjct: 239 EILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFIFCRPSEAEAEHEKL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|384564099|ref|ZP_10011203.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
gi|384519953|gb|EIE97148.1| seryl-tRNA synthetase [Saccharomonospora glauca K62]
Length = 420
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 190/318 (59%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAERRSAIAKADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ GK L + E + + ++E ++ + +PN+ HP VP GGED ++
Sbjct: 61 KASGEERESLLARGKELAAQVKEAEAEQNRASEEFEKLHRVVPNVVHPAVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +LG+AL D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPREFDFTPKDHLELGEALGALDMERGAKVSGARFYFLTGVGAQLQLALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++GF + P +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QAAEKGFQLMIPPVLVRPEIMAGTGFL--GAHSSEVYRLPDDDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC+P +++ HE+L
Sbjct: 239 EILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCEPSDAEEEHEKL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|452954621|gb|EME60021.1| seryl-tRNA ligase [Amycolatopsis decaplanina DSM 44594]
Length = 422
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 191/318 (60%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ + V A+ R R + + + +L L + + D+LR E+ ++ K+
Sbjct: 2 IDPRTLRDDPDVVRASQRARGEDEGVVDKLLSLDSRRRSSIAAADKLRAEQKSLG-KLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + ER +L+ + K+L + T E + + ++E +Q + +PN+ HPD P GGED ++
Sbjct: 61 KAQGDERAELLAKAKDLAAQVKTAEVEQTEASEEFEQLHRLVPNLVHPDAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +L + L D + A+VSGS+FY+L L++GL+N ++
Sbjct: 121 LKHVGEPKKFDFEPKDHLELCEGLGALDMERGAKVSGSRFYFLTGVGAQLQLGLLNMAIA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFTP+ TP +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QATANGFTPMITPTLVRPEIMAGTGFL--GAHSSEVYRLRDDDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL P +YA +S C+R EAG+ G TRG+ RVHQF K+EMFV+ +PE++++ H L
Sbjct: 239 EILDLGDGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFVYTRPEDAEAEHARL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE + + + + ++++
Sbjct: 299 LDWEEQMLAKIEVPYRVI 316
>gi|336377012|gb|EGO05347.1| hypothetical protein SERLA73DRAFT_157906 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390055|gb|EGO31198.1| hypothetical protein SERLADRAFT_432851 [Serpula lacrymans var.
lacrymans S7.9]
Length = 518
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 191/337 (56%), Gaps = 18/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D++ I ++ S N NR + L+ V LY + +V ++ R ER+ +
Sbjct: 54 KPRLDYRAITESVVYKSHNAFNRKAPLPVGALQSVARLYAEQKDVSSTLNTKRNERSTIG 113
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+++ E+Q+ +EE K LK + LE L ++ + L A IPN THP P+G E
Sbjct: 114 ERIRRSKGSEEKQRALEEAKALKTEVGELEAKLEEVEERLLGLALAIPNDTHPASPLGPE 173
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ +++ T G P +DH +G+ L +FDF+A A V+GS +YYL EA +LEM L
Sbjct: 174 EAAVVLSTHGPEPKPADPKRDHVDVGRILGLFDFEAGALVTGSSWYYLLGEAALLEMALT 233
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-----TQVYSIE----------G 293
N+ +S IK GF P TP++VR+ + +CGFQPR + +Q+Y I
Sbjct: 234 NYAMSIAIKHGFKPTMTPDVVRADIALRCGFQPRDQSADPPVSQMYHISQHLPSESSHNH 293
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
+ L GTAEIP+GG+ + I+ S LPLK FR EAGA G TRGLYRVHQFSK
Sbjct: 294 PELVLTGTAEIPLGGLFANQIVPASALPLKVVGLGRSFRAEAGARGADTRGLYRVHQFSK 353
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
LE+FV C E S++ EE+ ++E+++S LG F++L
Sbjct: 354 LELFVVCTEEASEAAMEEMRCVQEEIFSGLGFPFRVL 390
>gi|342320987|gb|EGU12925.1| Seryl-tRNA synthetase, putative [Rhodotorula glutinis ATCC 204091]
Length = 1067
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 188/331 (56%), Gaps = 22/331 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLEL---YEKMLNVQKEVDRLREERNAVANKM 131
ID + D+ E V N+ R N + EL ++ +KEV+RLR +RNA+A +
Sbjct: 41 IDLSAVLDSPEIVKRNLLERKFPLNPSKIDELRTLASQLAETKKEVERLRAQRNALAAQS 100
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
KG +P R+K GK +K L +E + +L E+Q+ A +PN +HP+VPVG ED +
Sbjct: 101 KG--DPEAREK----GKEVKRELQAVEPRVAELALEIQEIALQLPNTSHPEVPVGAEDQA 154
Query: 192 IIRKTVGNPSVFNF-----PVKDHFQLGKALDI--FDFDAAAEVSGSKFYYLKNEAVMLE 244
I KT+G P + P +DH L ++ DF A+A +GS + L NEA +LE
Sbjct: 155 RIVKTLG-PDLGASEPRAEPERDHLTLSSPSNLAWTDFAASAFTTGSSWPLLTNEAALLE 213
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VY----SIEGADQCLI 299
+ L N+ +S + GFTP+ TP++VRS V +CGF+PR Q Y IE + CL
Sbjct: 214 LALTNYAMSIALSHGFTPVLTPDVVRSEVSARCGFRPRDDEAQQTYFLSDGIETSALCLA 273
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GTAEIP+ G+ E LP K+ A FR EAGA G +RGLYRVHQFSK+EM V
Sbjct: 274 GTAEIPLVGMSGSQTFLEQDLPRKHVAIGRAFRAEAGARGADSRGLYRVHQFSKVEMVVV 333
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C EESD+ EEL ++E++ L L ++L
Sbjct: 334 CAEEESDALLEELRGVQEEILGGLELSLRVL 364
>gi|384497117|gb|EIE87608.1| seryl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 316
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 167/270 (61%), Gaps = 4/270 (1%)
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
RN ++ +K SERQ LIE+GK++K + + E+ L ++ +L + IPN THP
Sbjct: 2 RNDISLTIKKTAAGSERQGLIEKGKSIKAKVKSTEDQLKQIEADLLIKGLLIPNTTHPKA 61
Query: 184 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
P+G E+ + I KTVG + +KDH Q+ L+I D + AA SGS FYYL+ L
Sbjct: 62 PIGSEENARILKTVGIQRMEE-SLKDHIQITTELNILDLEQAAITSGSSFYYLQGMGAFL 120
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG-ANTQVYSIEGADQ--CLIG 300
E+ LIN+ + + +GF + TP+IVR+S+ CGFQPR ++Q+Y I +++ CL G
Sbjct: 121 ELALINYAMHKAASKGFFGVLTPDIVRTSIAYGCGFQPRADEHSQIYDIRSSNEPLCLAG 180
Query: 301 TAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC 360
TAEIP+ G D L E+ LP K F H FRTE G G +GLYRVHQFSK+E+F
Sbjct: 181 TAEIPLAGKFADKTLLEAQLPQKLVGFGHAFRTEDGGRGQEPKGLYRVHQFSKVELFAVT 240
Query: 361 QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
PE+S+ EE+ I+E++++ LGL F++L
Sbjct: 241 TPEQSEEMMEEIRMIQEEMFTELGLCFRVL 270
>gi|381163962|ref|ZP_09873192.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
gi|379255867|gb|EHY89793.1| seryl-tRNA synthetase [Saccharomonospora azurea NA-128]
Length = 421
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 187/318 (58%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDARRRSAIATADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ GK L + E + + +E + + +PN+ HP+VP GGED ++
Sbjct: 61 KASGEERESLLARGKELAAQVKAAEAEQKRAGEEFDELHRVVPNVVHPEVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +LG+ L D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPREFDFTPKDHLELGETLGALDMERGAKVSGARFYFLTGIGARLQLALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ GF + P +VR V+ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QAVENGFQLMIPPVLVRPEVMAGTGFL--GAHSSEVYRLPDDDLYLVGTSEVPLAGYHSD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC P+E+++ H +L
Sbjct: 239 EIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCTPDEAEAEHAKL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|418462893|ref|ZP_13033928.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
gi|359735235|gb|EHK84197.1| seryl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
Length = 421
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 186/318 (58%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDARRRSAIATADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ GK L + E + + +E + + +PN+ HP VP GGED ++
Sbjct: 61 KASGEERESLLARGKELAAQVKAAEAEQKRAGEEFDELHRVVPNVVHPQVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +LG+ L D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPREFDFTPKDHLELGETLGALDMERGAKVSGARFYFLTGIGARLQLALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ GF + P +VR V+ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QAVENGFQLMIPPVLVRPEVMAGTGFL--GAHSSEVYRLPDDDLYLVGTSEVPLAGYHSD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC P+E+++ H +L
Sbjct: 239 EIVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCTPDEAEAEHAKL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|449550910|gb|EMD41874.1| hypothetical protein CERSUDRAFT_90458 [Ceriporiopsis subvermispora
B]
Length = 505
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 183/333 (54%), Gaps = 17/333 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
ID++ I +N S N NR ++ V LY++ + + V RNA+ N++
Sbjct: 48 IDYRAISENVLYKSHNAFNRKVQLQVGAVQTVARLYDEYKQLLRIVQDKTAARNAIQNRI 107
Query: 132 KGKLEPSE-RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ E R +EE K LK L L+ L + L+ A IPN THP P+G E
Sbjct: 108 ENCGGDKELRIAAVEEAKALKPELADLKAKLADVEGRLETLALAIPNDTHPLTPIGPESA 167
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ + T G + P +DH + +ALD+ D ++AA V+G+ +YYL NE +LE+ LIN+
Sbjct: 168 AKVLSTHGPAPMPASPARDHVSICRALDLLDLESAAVVTGTSWYYLINEGALLELALINY 227
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-----TQVYSIEGADQ--------C 297
LS +KRGF P+TTP+++R+ + +CGFQPR N +Q+Y I ++
Sbjct: 228 ALSIAMKRGFKPVTTPDVIRADIARRCGFQPRDQNADPPVSQMYHIANSEHEAAHHPELI 287
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L GTAEIP+ G+ L LP+K FR EAGA G TRGLYRVHQF+KLE+F
Sbjct: 288 LAGTAEIPLAGMFAKKTLPVQALPVKLVGLGRAFRAEAGARGADTRGLYRVHQFTKLELF 347
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+S+ E+L ++ +++ LGL F++L
Sbjct: 348 AVTAEEQSEEMMEKLRSLQVEIFEGLGLPFRVL 380
>gi|375093083|ref|ZP_09739348.1| seryl-tRNA synthetase [Saccharomonospora marina XMU15]
gi|374653816|gb|EHR48649.1| seryl-tRNA synthetase [Saccharomonospora marina XMU15]
Length = 422
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 183/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + D LR E+ + K+ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDEGVVDTLLSLDATRRSAIARADTLRAEQKQLGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ +GK L + E + + + E + Q +PN+ P VP GGED ++
Sbjct: 61 KASGEEREALLAQGKELAARVKAAESEQARASAEFDELYQRLPNLVRPGVPSGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F +DH +LG+ L D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPPEFDFTPRDHLELGEGLRAVDMERGAKVSGARFYFLTGIGAQLQLALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF + P +VR V+ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QATANGFQLMIPPVLVRPEVMSGTGFL--GAHASEVYQLPDEDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC+P+E+ + HE L
Sbjct: 239 EILELSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCRPQEAQAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LGWEEEMLAKIEVPYRVI 316
>gi|441142673|ref|ZP_20962541.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440622618|gb|ELQ85397.1| seryl-tRNA ligase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 429
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRTSSVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+++ L + + + + +E Q + N+ HPDVPVGGE+ +
Sbjct: 61 KATGDEKAALLKKAGELSAAVKAADAEQDEAKEETQSLLLRLGNLVHPDVPVGGEEDFTV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+TVG P F F KDH +LG+AL D + AA+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETVGTPRDFAAEGFEPKDHLELGQALGAIDVERAAKVSGSRFYYLTGIGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPHAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++ + H+
Sbjct: 240 MDEIVDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPEDAQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLDWEKQWLTGLELPFQVI 319
>gi|299756138|ref|XP_001829122.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|298411539|gb|EAU92757.2| seryl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 535
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 188/325 (57%), Gaps = 9/325 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNS---NANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D+K I +N +A N + R + ++ V +LY + V K+++ R +++ + ++
Sbjct: 88 LDYKSIAENVDAKIHNAQIRAAPIPQEDIRTVSKLYNEAKEVSKQLNFQRHQQSQIGERI 147
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
+ ER K +E LK+ + L+ L +L Q A IPN THP PVG E +
Sbjct: 148 RKAANEEERAKAKQEAAALKQQVHELQASLQQLEQTYQAYALHIPNDTHPQSPVGPEPSA 207
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + + P +DH + K LD+ D ++ A V+GS +Y+LKNEA +LEM L N++
Sbjct: 208 VTLEVCRPNTEPADPKRDHVAIAKELDLLDLESGATVTGSSWYFLKNEAALLEMALSNYS 267
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG-ANTQVYSI----EGADQCLI-GTAEIP 305
++ IK GFTP+TTP++VRS V +CGFQPR A + +Y + E A Q ++ GTAEIP
Sbjct: 268 MAVAIKHGFTPVTTPDVVRSDVAVRCGFQPRDQAASHMYHLTKNHETAPQLILSGTAEIP 327
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G+ + + ++ LPLKY H FR EAGA TRGLYRVHQF+K+E+F E S
Sbjct: 328 LAGMFANKVYQQAELPLKYVGIGHAFRQEAGARSADTRGLYRVHQFTKVELFAVTDAEGS 387
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ E++ I+ ++ L L F++L
Sbjct: 388 EEMMEKMKDIQIEILRDLNLSFRVL 412
>gi|374988045|ref|YP_004963540.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
gi|297158697|gb|ADI08409.1| seryl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 425
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 188/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + A ++ +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVAVVDALLSADERRRSSSVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + T + + + +E Q+ + N+ HPDVPVGGED +
Sbjct: 61 KASGDEKAELLKKAGELSASVKTADAEQDQAAEETQRLLLQLGNLVHPDVPVGGEDDFAV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+TVG P F F KDH +LG+ L D + A+VSGS+FYYL +LE L+N
Sbjct: 121 LETVGTPRDFAAEGFTPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLEFALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GF P+ TP +V+ +E GF + A+ VY ++ D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFIPVLTPALVKPKAMEGTGFLGQAAD-DVYHLDKDDLFLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL S LP +YA FS CFR EAG+ G TRG++RVHQF K+EMFV+ PEE+++ H+
Sbjct: 240 MDEILDVSQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMFVYTTPEEAEAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|406905620|gb|EKD47034.1| hypothetical protein ACD_66C00250G0003 [uncultured bacterium]
Length = 423
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 184/317 (58%), Gaps = 2/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K +R+N + + + +N + +LEL + + +++ + ++ ++N + ++
Sbjct: 2 IDIKLLRENTQQIREAAKAKNVEIDFTRILELDKLVRSLENNIQQIATQKNEASKRIPQA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
E S+R KLIEE + + L+ +L L++EL + IPN PDV + E + I
Sbjct: 62 SE-SDRAKLIEEMRQIDRKGDELKAELTPLSEELDELLYKIPNPALPDVKIAKNESENEI 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
KT+G FNF KDH +LG L I D AA VSG++F Y + V+LE LI + L+
Sbjct: 121 IKTIGEIPSFNFTPKDHLELGDILGIIDTQRAANVSGARFNYFIGDGVLLEFALIQFALA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFTP+ TP +++ + G+ G + ++Y + + LIGTAE VG +HMD
Sbjct: 181 TLSEYGFTPVITPHMIKPQAMRAMGYLEHGGHDEIYYLPKDNLYLIGTAEQSVGAMHMDE 240
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + LP++Y FS C+R EAG+ G TRG+ RVHQF K+EMF F PE+SD+ H ++
Sbjct: 241 ILDGTKLPIRYVGFSPCYRREAGSYGKDTRGILRVHQFDKIEMFTFSTPEDSDAEHSLIL 300
Query: 374 RIEEDLYSSLGLHFKLL 390
IEE L SL + ++L+
Sbjct: 301 EIEERLMQSLKIPYQLV 317
>gi|302695603|ref|XP_003037480.1| hypothetical protein SCHCODRAFT_13705 [Schizophyllum commune H4-8]
gi|300111177|gb|EFJ02578.1| hypothetical protein SCHCODRAFT_13705 [Schizophyllum commune H4-8]
Length = 491
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 183/328 (55%), Gaps = 12/328 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLEL---YEKMLNVQKEVDRLREERNAVANKM 131
+++K I +N + N NR L+ V ++ ++++ V +++ LR R+ + ++
Sbjct: 37 LNYKNISENVVYKATNAMNRKCGVTLDDVQDVARTHKEVKAVTNQLNALRNTRSMIGERI 96
Query: 132 KGKLEPSE---RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ + + +++ + E N+K+ + TLE+ L L +L + A IPN THPD P+G E
Sbjct: 97 RRAAQQKDDKGKEEAMIEATNVKKEIATLEDKLATLEQQLLRLALAIPNDTHPDAPLGPE 156
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D ++ T G + P +DH K + D ++ A VSG+ + YL NEA +LE+ L
Sbjct: 157 DAAVTLSTHGPEPIPADPRRDHVAFCKKFGLLDLESGATVSGTSWVYLTNEAALLELALT 216
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSI-----EGADQCLIGTA 302
N+ LS ++ GFTP+ P++VR+ V +CGFQPR +Q+Y + D L GTA
Sbjct: 217 NYALSIAVRHGFTPVMPPDVVRADVAYRCGFQPRDDQASQIYDVSTPTSSSQDLILAGTA 276
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EIP+ G+ + I + LP K H FR EAGA G TRGLYRVHQFSK+E+F
Sbjct: 277 EIPLAGMFANKIFPSTSLPRKVVGMGHAFRAEAGARGADTRGLYRVHQFSKVELFAVTDA 336
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E S++ E+ I+ ++ LGL ++L
Sbjct: 337 ESSEAMMAEMASIQTEILRGLGLSLRVL 364
>gi|29830787|ref|NP_825421.1| seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|46577430|sp|Q82FK8.1|SYS1_STRAW RecName: Full=Serine--tRNA ligase 1; AltName: Full=Seryl-tRNA
synthetase 1; Short=SerRS 1; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase 1
gi|29607900|dbj|BAC71956.1| putative seryl-tRNA synthetase [Streptomyces avermitilis MA-4680]
Length = 425
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 188/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRSEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + + + + +E ++ + N+ HPDVPVGGE+ ++
Sbjct: 61 KASPEERAELLKKAEQLKADVKAADVEQHEADEEAKRLLLQLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A+ VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQ-ASENVYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LP++YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAENEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLEWEKQWLTGLELPFQVI 319
>gi|254393739|ref|ZP_05008859.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294813672|ref|ZP_06772315.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326441924|ref|ZP_08216658.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197707346|gb|EDY53158.1| seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294326271|gb|EFG07914.1| Seryl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 425
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSGVRFDELRSEQKQL-GKLVP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L++ + LK + E + +E ++ + N+ H DVPVGGED ++
Sbjct: 61 KASPEERAELLKRAEQLKSEVKAAEATQNEADEEAKRLLLRLGNIVHEDVPVGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPKDHLELGEALRAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPTLVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS C+R EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEIIDADQLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQFDKVEMFSYVMPEDAEAEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFQVI 319
>gi|403411419|emb|CCL98119.1| predicted protein [Fibroporia radiculosa]
Length = 409
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 168/283 (59%), Gaps = 13/283 (4%)
Query: 121 REERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
R R+ + ++ K + +Q ++ + K LK + LE+ L +L +L A IPN T
Sbjct: 9 RHARSLMGERIRKSGTDAEAKQAVLNDAKALKAEIAVLEDQLEELDSQLFTLALAIPNDT 68
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
HPDVP+G E S+I T G + V+DH + + L++ D +A A V+GS +YYL NE
Sbjct: 69 HPDVPIGPESESVILSTHGPDPLPASSVRDHVSICRTLNLLDIEAGATVTGSSWYYLINE 128
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-----TQVYSIEGA 294
+LE LIN+ LS +K GFTP+TTP++VR+ + +CGFQPR N +Q+Y + +
Sbjct: 129 GALLEQALINYALSIALKHGFTPVTTPDVVRADIASRCGFQPRDHNSDPPTSQMYHLASS 188
Query: 295 -------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+ L GTAEIP+ G+ + IL LP K FR EAGA GT TRGLYR
Sbjct: 189 HTGSHHPELVLAGTAEIPLAGMFANKILQPDDLPRKLVGLGRAFRAEAGARGTDTRGLYR 248
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF+KLE+FV C+ S++ E+L +++ +++ LG F++L
Sbjct: 249 VHQFTKLELFVACEARASEAIMEQLRQLQIEIFEGLGFPFRVL 291
>gi|357400606|ref|YP_004912531.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386356659|ref|YP_006054905.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|337767015|emb|CCB75726.1| Seryl-tRNA synthetase 1 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365807167|gb|AEW95383.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 412
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 178/308 (57%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ A+ K+ K E+ L++
Sbjct: 1 MRASQRARGEDVGLVDALLSADERRRSSSHRFDELRAEQKAL-GKLIPKAAGEEKAGLLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF-- 203
+ L + + + +E Q I N+ HP+VPVGGE+ + +TVG P F
Sbjct: 60 KAGELSAAVKAADAEQNLAAEEAQALLLRIGNLVHPNVPVGGEEDFTVLETVGTPRDFAA 119
Query: 204 -NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG+AL D + AA+VSGS+FYYL +LE+ L+N +++ + GFTP
Sbjct: 120 EGFEPKDHLELGQALGAIDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +V+ +E GF + A VY +E D L+GT+E+P+ HMD I+ + LPL
Sbjct: 180 MLTPALVKPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYHMDEIVEAARLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG G TRG++RVHQF K+EMF F PEE+++ H+ L+ E+ +
Sbjct: 239 RYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFCFVAPEEAEAEHQRLLAWEKQWLGA 298
Query: 383 LGLHFKLL 390
LGL F+++
Sbjct: 299 LGLPFQVI 306
>gi|390604619|gb|EIN14010.1| seryl-tRNA synthetase [Punctularia strigosozonata HHB-11173 SS5]
Length = 479
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 184/322 (57%), Gaps = 6/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+ K + ++ +A + N R + + ++ LY + +Q + ++ V +++
Sbjct: 39 LRLKTLSESPDAAAHNAATRKAQLEPDTFIKIASLYTEQKELQSAYNTKVHVQSTVGDQI 98
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
+ + ++Q IE+ K LK L +++ L + +L Q A +PN THP P+G E +
Sbjct: 99 RTIRDLDQKQAAIEKAKRLKSELSSIDSKLSETKSQLLQLALSVPNDTHPSTPLGPESAA 158
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ T G + +DH + ++LD+ D +A + +GS +YYL+NE MLE+ L N+
Sbjct: 159 VTLCTHGPEPMPQDSARDHVAVARSLDLLDLEAGSSTTGSSWYYLRNEGAMLELALTNYA 218
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLI--GTAEIPVGG 308
LS +K GFT +TTP++VRS + +CGFQPR + +Q+Y +E + L+ GTAEIP+ G
Sbjct: 219 LSIALKHGFTFVTTPDVVRSDIAARCGFQPRDRDASQIYHLEHTNPQLVLAGTAEIPLAG 278
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+ + I +E LP+K FR EAGA G TRGLYRVHQF KLE+F +ES++
Sbjct: 279 MLANKIFTEDALPIKVVGLGKAFRAEAGARGADTRGLYRVHQFQKLELFAATTEDESEAM 338
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
EEL I+ +++ LG F++L
Sbjct: 339 MEELRLIQTEIFEGLGFPFRIL 360
>gi|297193371|ref|ZP_06910769.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
gi|197718310|gb|EDY62218.1| seryl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC 25486]
Length = 425
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 186/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVGLVDALLSADERRRSSGLRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + E + +E ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPDERAELLKKAEQLKSDVKAAEAEQNDAEEETRRLLLQVGNLVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFTPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAEAEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLDWEKQWLTALELPFQVI 319
>gi|386384946|ref|ZP_10070278.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
gi|385667588|gb|EIF90999.1| seryl-tRNA synthetase [Streptomyces tsukubaensis NRRL18488]
Length = 425
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ ++
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSGVRFDELRSEQKSL-GRLVS 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+ + LK + E + +E + + N+ HPDVPVGGE+ ++
Sbjct: 61 KASPEERAELLTRAEQLKADVKAAEAAQNEADEETRGLLLRLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F +DH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPRDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H
Sbjct: 240 MDEILDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFQVI 319
>gi|254384853|ref|ZP_05000190.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
gi|194343735|gb|EDX24701.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces sp. Mg1]
Length = 425
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 186/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + +L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDLVDALLSADERRRSSGMRFDELRNEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + E + + + ++ + N+ H DVPVGGE+ +
Sbjct: 61 KASPEERAELLKKAEQLKGDVKAAEAEQNEADEAAKRLLLQLGNIVHTDVPVGGEEDFTV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG++L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPKDHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PEE+++ H+
Sbjct: 240 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEEAEAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFQVI 319
>gi|408679452|ref|YP_006879279.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
gi|328883781|emb|CCA57020.1| Seryl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 429
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + E + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERAELLQKAEQLKTDVKAAEAEQNEADETARKLLLQLGNIVHTDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAEAEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLEWEKQWLTGLELPFQVI 319
>gi|227489079|ref|ZP_03919395.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227543355|ref|ZP_03973404.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227090960|gb|EEI26272.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227180860|gb|EEI61832.1| seryl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 418
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 189/317 (59%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + +L + +L E + ++ D+LR+E+N K+ G
Sbjct: 2 IDLKFLRENPDVVRESQRTRGEDPSLVDKLLAADETRRDAIQKADQLRQEQNGFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P+ER LIEE LK L E + ++ + N+ P GGED I+
Sbjct: 61 QASPAERPALIEESTALKAKLKDAEAAQKQAEQDVFDIQMQLGNVVE-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG + F+F KDH + + L I D + A+VSGS+FY+LK L++ ++N
Sbjct: 120 VEEVGEKTTFDFEPKDHLDIAENLGILDMERGAKVSGSRFYFLKGLGAQLQLAMMNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ I+ GFT + TP IVR ++ GF + ++ ++Y ++ +Q L+GT+E+ + G H D
Sbjct: 180 KAIEHGFTLMITPVIVRPETMQGTGFLGQHSD-EIYYLQEDNQYLVGTSEVALAGYHSDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE++++ H+ L+
Sbjct: 239 IIDLSQGPLHYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEDAEAQHQALL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+D+ +++ + ++++
Sbjct: 299 AMEKDMLAAIEVPYRII 315
>gi|408825617|ref|ZP_11210507.1| seryl-tRNA ligase [Streptomyces somaliensis DSM 40738]
Length = 425
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 186/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + +L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDLVDALLSADERRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L++ + LK + + + + +E + + N+ HPDVPVGGE+ ++
Sbjct: 61 KASPEERAELLKRAEQLKADVKAADAEQHEAEEEARHLLLRLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDFYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS C+R EAG G TRG++RVHQF K+EMF + PE++++ H
Sbjct: 240 MDEILDADKLPLRYAGFSPCYRREAGTYGKDTRGIFRVHQFDKVEMFCYVAPEDAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLEWEKQWLTALELPFQVI 319
>gi|408530802|emb|CCK28976.1| Seryl-tRNA synthetase 1 [Streptomyces davawensis JCM 4913]
Length = 412
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 178/308 (57%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ ++ K+ K P ER +L++
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSL-GKLIPKATPEERAELLQ 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN- 204
+ LK + E + DE ++ + N+ HPDVPVGGE+ ++ +T G F
Sbjct: 60 RAEQLKTDVKAAEAAQNEADDETKRLVLQLGNLVHPDVPVGGEEDFVVLETHGTIRDFGA 119
Query: 205 --FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N +++ + GFTP
Sbjct: 120 EGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNAAIAQATEAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +VR +E GF + A VY +E D L+GT+E+P+ HMD IL LPL
Sbjct: 180 MLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYHMDEILDADKLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+ L+ E+ +
Sbjct: 239 RYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAENEHKRLLEWEKQWLTG 298
Query: 383 LGLHFKLL 390
L L F+++
Sbjct: 299 LELPFQVI 306
>gi|325675174|ref|ZP_08154860.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325554135|gb|EGD23811.1| serine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 421
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 4 IDLKFLRENPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAFGKKV-G 62
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+ K L + + E + +L + + I N+ P GGED I
Sbjct: 63 QASPEERPALLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAPAGGEDDFIT 122
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH +LG++L + D + A+VSGS+FY+L ML++G++
Sbjct: 123 LETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGMLQLAAQ 182
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT + P +VR V++ GF + ++ +VY + D L+GT+E+P+ G H
Sbjct: 183 KAMANGFTMMIPPVLVRPEVMQGTGFLGQHSD-EVYHLADDDLYLVGTSEVPLAGYHSGE 241
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L+
Sbjct: 242 ILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLL 301
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ ++GL ++++
Sbjct: 302 AWERDMLDAMGLPYRVI 318
>gi|302535646|ref|ZP_07287988.1| seryl-tRNA synthetase [Streptomyces sp. C]
gi|302444541|gb|EFL16357.1| seryl-tRNA synthetase [Streptomyces sp. C]
Length = 425
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSGMRFDELRNEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+ + + LK+ + E + + + +Q + N+ H DVPVGGE+ +
Sbjct: 61 KASPEERAELLTKAEQLKQDVKAAEAEQNEADEAAKQLLLKLGNIVHEDVPVGGEEDFTV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F +DH +LG++L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFAPRDHLELGESLGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++++ H+
Sbjct: 240 MDEIIDAEKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEDAEAEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFQVI 319
>gi|383829416|ref|ZP_09984505.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
gi|383462069|gb|EID54159.1| seryl-tRNA synthetase [Saccharomonospora xinjiangensis XJ-54]
Length = 421
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 188/318 (59%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAQRRSAIAKADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ERQ+L+ GK L + E + + ++E +Q + +PN+ HP+VP GGE+ +
Sbjct: 61 KASGDERQELLARGKELAAEVKEAEAEQSRASEEFEQLHRVVPNVVHPEVPEGGEEDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG+AL D + A+VSG++FY+L L++ L+ +
Sbjct: 121 LRHVGTPREFDFTPKDHLELGEALGAIDMERGAKVSGARFYFLTGIGARLQLALLTMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QATENGFQLMIPPVLVRPEIMAGTGFL--GAHSSEVYHLADDDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC P ++++ HE L
Sbjct: 239 EILDLTGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCDPSDAEAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|312137683|ref|YP_004005019.1| seryl-tRNA ligase sers [Rhodococcus equi 103S]
gi|311887022|emb|CBH46331.1| seryl-tRNA ligase SerS [Rhodococcus equi 103S]
Length = 419
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDAVRTSQRTRGEDPGLVDALLEADASRRAAILAGDTLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+ K L + + E + +L + + I N+ P GGED I
Sbjct: 61 QASPEERPALLAGSKELAQKVKDAEAAQHEAQAKLDEAHRAISNIVQDGAPAGGEDDFIT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH +LG++L + D + A+VSGS+FY+L ML++G++
Sbjct: 121 LETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFLTGFGAMLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT + P +VR V++ GF + ++ +VY + D L+GT+E+P+ G H
Sbjct: 181 KAMANGFTMMIPPVLVRPEVMQGTGFLGQHSD-EVYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L+
Sbjct: 240 ILDLSNGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ ++GL ++++
Sbjct: 300 AWERDMLDAMGLPYRVI 316
>gi|302544049|ref|ZP_07296391.1| serine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302461667|gb|EFL24760.1| serine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 425
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 184/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + + + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVGIVDALLAADERRRSSSVRFDELRSEQKSL-GKLVP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + +E Q + + N+ HPDVPVGGED +
Sbjct: 61 KASGDEKAELLKKAGELSAAVKAADAEQDAAAEETQNLLRQLGNLVHPDVPVGGEDDFTV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+TVG P F KDH +LG+ L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETVGTPRDFAAEGIAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +V+ +E GF + A VY ++ D L+GT+E+P+ H
Sbjct: 181 AMAQATAAGFTPVLTPALVKPKAMEGTGFLGQAAE-DVYHLDKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LP +YA FS CFR EAG+ G TRG++RVHQF K+EMFV+ PEE+++ H+
Sbjct: 240 MDEILESEQLPRRYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMFVYTTPEEAEAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVV 319
>gi|291005181|ref|ZP_06563154.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 421
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 186/318 (58%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ EAV A+ R R +A++ + +L E+ + D LR E+ + ++ G
Sbjct: 2 IDLKTLREDPEAVRASQRARGEDASVVDALLSADERRRSAVSRADSLRAEQKQLGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+++ K L + E + + L + + + N+ P VP GGED +
Sbjct: 61 KAAGEEREHLLKKAKELSAQVKDAEAEQAEADQALVEAQKKLSNIVGPGVPPGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F VKDH +LG +L D + A+V+G++FY+L LE+ L+N +
Sbjct: 121 LKHVGVPPEFDFEVKDHLELGTSLGAMDMERGAKVAGARFYFLTGIGAQLELALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
GFT + P +VR ++E GF GA++ +VY +E D L+GT+E+P+ G H
Sbjct: 181 HATANGFTLVVPPVLVRPEIMEGTGFL--GAHSSEVYRLEEDDLYLVGTSEVPLAGYHSG 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ PL+YA +S CFR EAG+ G TRG+ RVHQF+KLEMFV+C+ E++ + HE L
Sbjct: 239 EIIDLGAGPLRYAGWSSCFRREAGSYGRDTRGIIRVHQFNKLEMFVYCREEDAVAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LGWEEEMLAKIEVPYRVI 316
>gi|407985542|ref|ZP_11166135.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
gi|407372887|gb|EKF21910.1| serine--tRNA ligase [Mycobacterium hassiacum DSM 44199]
Length = 419
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N EAV A+ R R + L +++L + D LR E+ A + K+ G
Sbjct: 2 IDLRLLRENPEAVRASQRARGEDPGLVDVLLAADAARRAAVTKADNLRAEQKAASRKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+E+ K L E + E + + + I N+ VP GGED ++
Sbjct: 61 KAAPEERPALLEQAKELAERVKAAEAEQAEAARAFTEAHMAISNVILDGVPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P P +DH +LG++L + D D A+VSG++FY+L +L++GL+ +
Sbjct: 121 LDTVGEPPAIENP-RDHVELGESLGLIDLDRGAKVSGARFYFLTGAGALLQLGLVQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
I GFT + P +VR ++ GF GA+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LAIDNGFTLMVPPVLVRPEIMSGTGFL--GAHAAEVYRVEADDLYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA S CFR EAG+ G TRG+ RVHQF K+E F++C P+E+++ H+ L
Sbjct: 238 EILDLSGGPLRYAGLSTCFRREAGSHGKDTRGIIRVHQFDKVEGFIYCTPDEAEAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LDWQRQMLAKIEVPYRVI 315
>gi|256374275|ref|YP_003097935.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
gi|255918578|gb|ACU34089.1| seryl-tRNA synthetase [Actinosynnema mirum DSM 43827]
Length = 416
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 183/318 (57%), Gaps = 8/318 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N EAV A+ R R + +L + +L E+ + D LR E+ A ++ G
Sbjct: 2 IDLKALRENPEAVRASQRARGEDESLVDALLSADERRRSAVSRADTLRGEQKAFGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ +GK L + E D EL + + +PN+ HPD P GGED ++
Sbjct: 61 KARGEEREALLVKGKELAAEVKAAEADQAAAEAELTELHRSVPNLVHPDAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F DH LG L D + A+VSGS+FY+L LE+ L+N ++
Sbjct: 121 VKHVGEPREFDFEPLDHLDLGTRLGAIDMERGAKVSGSRFYFLTGIGAQLELALLNMAVA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF + TP +VR V+ GF GA+ +++Y +E D L+GT+E+P+ G H D
Sbjct: 181 QATAAGFQLMITPTLVRPEVMAGTGFL--GAHSSEIYRLEADDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ P +YA +S C+R EAG+ G TRG+ RVHQF+K+EMF + PEE+++ H L
Sbjct: 239 EIIDG---PRRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYVPPEEAEAEHARL 295
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 296 LAWEEEMLAKVEVPYRVI 313
>gi|375098490|ref|ZP_09744753.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
gi|374659222|gb|EHR59100.1| seryl-tRNA synthetase [Saccharomonospora cyanea NA-134]
Length = 421
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 189/318 (59%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + D LR E+ + ++ G
Sbjct: 2 IDLRTLREEPDVVRASQRARGEDVGVVDRLLSLDAERRSAIARADNLRAEQKQLGKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER+ L+ GK L + E + + ++E +Q + +PN+ HPDVP GGED ++
Sbjct: 61 KASGEERESLLAHGKELAAQVKAAEAEQNRASEEFEQLHRVVPNVVHPDVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F+F KDH +LG+AL D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPREFDFTPKDHLELGEALGAIDMERGAKVSGARFYFLTGIGARLQLALLNLAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++GF + P +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QAAEKGFQLMIPPVLVRPEIMAGTGFL--GAHSSEVYHLPDDDLYLVGTSEVPLAGYHSD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC+P ++++ HE L
Sbjct: 239 EILDLTAGPQRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFCEPSDAEAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|440704484|ref|ZP_20885330.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
gi|440273859|gb|ELP62542.1| serine--tRNA ligase [Streptomyces turgidiscabies Car8]
Length = 429
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 184/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRASGVRFDELRSEQKSI-GKLIS 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + + +E ++ + N+ HPDVPVGGE+ ++
Sbjct: 61 KASAEEKAELLKKTGRLAADVKAADAEQHEADEEAKKLLLQLGNLVHPDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LP++YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H+
Sbjct: 240 MDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAENEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLDWEKQWLTALELPFQVI 319
>gi|430813782|emb|CCJ28907.1| unnamed protein product [Pneumocystis jirovecii]
Length = 437
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 175/308 (56%), Gaps = 10/308 (3%)
Query: 93 NRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---EPSERQKLIEEGKN 149
N+ S N+ +++LYE L K D L +RN + +++K + S QKLI
Sbjct: 17 NKVSFDNVSRIIDLYEIYLRHIKLRDNLLNQRNRLTDEIKQGIVDRSDSSYQKLINYASE 76
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSIIRKTVGNPSVFNFPVK 208
+K+ + E DL + EL Q IPN HP P+G E + ++R + F K
Sbjct: 77 IKKKIQKAETDLRFIKLELLQLGLTIPNDIHPLSPIGPEENAKVVRYINSDKQCFISEPK 136
Query: 209 DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEI 268
DH + LD+ DFDA A+ SG FY+LKNEA ++E+ L+N+ L + I G+ + P I
Sbjct: 137 DHIIIANILDLIDFDAGAKTSGHAFYFLKNEAAIMELALVNYALIKAINAGWKFVIPPSI 196
Query: 269 VRSSVVEKCGFQPRGA--NTQVYSIEGAD----QCLIGTAEIPVGGIHMDSILSESLLPL 322
VRS +V CGFQPR NTQ+Y + + CL GT+EI + GI ++ L S LP
Sbjct: 197 VRSEIVSACGFQPRDNFNNTQIYFLHHSSTEPTHCLAGTSEISIAGIGINKTLKGSDLPK 256
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
K S +R+EAGA G +RGLYRVH+F+K E+F + P+ESD E+++ ++E++
Sbjct: 257 KIVGVSRAYRSEAGARGKESRGLYRVHEFTKAELFAWTDPKESDKMLEDILDLQENIIKE 316
Query: 383 LGLHFKLL 390
LGL+ ++L
Sbjct: 317 LGLYARVL 324
>gi|298245535|ref|ZP_06969341.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
gi|297553016|gb|EFH86881.1| seryl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
Length = 428
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 188/322 (58%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +IR N +AV R +N+ ++ +LEL +++++Q+EV+ R ++NA++ K++
Sbjct: 2 LDLTFIRTNTDAVKEAARLKNNPIDINALLELDRRVVSLQQEVEEARAQQNALSKKIQQA 61
Query: 135 LEPSE---RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDC 190
+ R + I +GK L E + E L +L +E Q+ +PN+ P PVG ED
Sbjct: 62 AKEKNVELRNQYIAQGKQLSEAIKEKEPLLAQLQEERYQQLLLVPNIPDPSTPVGKDEDD 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K G F FP DH+ L + L++ D + A +V+GS+ Y LK A LE+ L+N+
Sbjct: 122 NVPIKYWGEKPNFAFPALDHYDLMQKLEMVDIERAVKVAGSRSYSLKGAAARLELALMNF 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++G+TP+ P + R G P+G + QVY IEG D L+GTAE+ + G++
Sbjct: 182 AFDRLSRKGYTPIIVPSMARDFAFVGNGQFPKGRD-QVYEIEGQDLFLVGTAEVSITGMY 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS--Y 368
D IL LPL Y +S CFR EAG G TRG++R+HQF+K+E ++ C+ + + S +
Sbjct: 241 KDEILKAEELPLTYVGYSPCFRQEAGTYGKDTRGVFRIHQFNKVEQYIICEADHAVSVQW 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
EEL R E+L +L L ++++
Sbjct: 301 FEELERNAEELIQALELPYRIV 322
>gi|295837833|ref|ZP_06824766.1| serine-tRNA ligase [Streptomyces sp. SPB74]
gi|197698265|gb|EDY45198.1| serine-tRNA ligase [Streptomyces sp. SPB74]
Length = 429
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVELVDSLLAADERRRSSGVRFDELRAEQKQL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q+L++ L + + + + Q + + N+ HPDVPVGGE+ +
Sbjct: 61 KAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEEDFAL 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG L D + AA+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR +E GF + A VY ++ D L+GT+E+ + G H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQAMEGTGFLGQ-AGQDVYHLKDDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S++ H
Sbjct: 240 MDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SLGL F+++
Sbjct: 300 RLLEWEKQWLTSLGLPFRVI 319
>gi|410583065|ref|ZP_11320171.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|410505885|gb|EKP95394.1| seryl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 426
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 182/321 (56%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R E + R + + ++L + L + + V+RLR ERNA++ ++ G
Sbjct: 2 IDPELLRKEPERIREAARLKGFDPETVDLAVTLDRRRRELLAVVERLRAERNALSKRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
L P ER + LKE L LE +L + + LQ C+PN P PVG ED
Sbjct: 61 SLPPEERHAALTRATVLKERLAQLEPELRDVQNRLQHLLLCLPNPPAPSSPVGSSDEDNV 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F FP +DH +LG+ L I + + A +++GS+ Y+LKNE +LE ++ +
Sbjct: 121 EIRRW-GQPPSFPFPPRDHLELGRLLGIIETERAVKLAGSRAYFLKNEGALLEWAVLRFA 179
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ +++RG+T L P +V + G+ P G +VY +E + L+GTAE+P+ HM
Sbjct: 180 VDLLLRRGYTLLAPPVLVLDEAMTATGYFPLG-REEVYRLERDELNLVGTAEVPLVAYHM 238
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ--PEESDSYH 369
D L E+ LP +Y A S CFR E G+AG GLYRVHQF K+E + C+ P+ S YH
Sbjct: 239 DETLEENELPRRYCALSPCFRREVGSAGRDVHGLYRVHQFFKVEQVIICEADPDASRRYH 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EEL++ ED+ +L L ++++
Sbjct: 299 EELLKNAEDILQALELPYRVV 319
>gi|444434107|ref|ZP_21229232.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
gi|443885034|dbj|GAC70953.1| serine--tRNA ligase [Gordonia soli NBRC 108243]
Length = 418
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 183/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V A+ RNR + L + +LE E D LR E+ + K+ G
Sbjct: 2 IDLKILREDPDLVRASQRNRGEDPGLVDTLLEADATRRAAIVEADSLRSEQKGL-GKLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q+L+ +GK L E + + Q + I N+ P GGED ++
Sbjct: 61 KAQGDEKQELLGKGKQLAEQVKAAVARQSSADEAAQAAHRAISNIVADGAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P + P KDH +LG++L + D + A+VSGS+FY+L +L++GL+N
Sbjct: 121 LEHVGEPRAIDDP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGPGALLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF+ + P +VR V+ GF A +VY +E D L+GT+E+P+ G HMD
Sbjct: 180 KAVANGFSLMIPPVLVRPEVMGGTGFLGSHA-AEVYHLEEDDLYLVGTSEVPLAGYHMDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+ L+
Sbjct: 239 IIDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKIEGFVYCRPEDAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ ++ + ++++
Sbjct: 299 GWEKEMLGAIDVPYRVI 315
>gi|300782127|ref|YP_003762418.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|384145332|ref|YP_005528148.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|399534009|ref|YP_006546671.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|299791641|gb|ADJ42016.1| seryl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|340523486|gb|AEK38691.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
gi|398314779|gb|AFO73726.1| seryl-tRNA synthetase [Amycolatopsis mediterranei S699]
Length = 394
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 167/274 (60%), Gaps = 2/274 (0%)
Query: 117 VDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIP 176
D+LR E+ + ++ K P E+Q+L+ K L + E + ++E Q + +P
Sbjct: 19 ADKLRNEQKLLGKQIP-KAPPEEKQQLLATAKELAAQVKAAEVEQNTASEEFDQLFRTVP 77
Query: 177 NMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
N+ HPD PVGGED + K VG P+ F KDH +L +AL D + A+VSGS+FY+L
Sbjct: 78 NLVHPDAPVGGEDDFTVVKHVGEPTKLGFTPKDHLELLEALGGVDMERGAKVSGSRFYFL 137
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
L++GL+N +++ ++ GFTP+ TP +VR ++ GF + ++++Y + D
Sbjct: 138 TGVGAQLQLGLLNMAIAQALENGFTPMITPSLVRPEIMAGTGFLGQ-HSSEIYHLADDDL 196
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L+GT+E+P+ G H D IL + P +YA +S C+R EAG+ G TRG+ RVHQF K+EM
Sbjct: 197 YLVGTSEVPLAGFHADEILDLNDGPNRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEM 256
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
FV+ +P ++++ HE L+ EE + + + + ++++
Sbjct: 257 FVYAKPADAEAEHERLLGWEEQMLAKIEVPYRVI 290
>gi|333025791|ref|ZP_08453855.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
gi|332745643|gb|EGJ76084.1| putative serine-tRNA ligase [Streptomyces sp. Tu6071]
Length = 429
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQKQL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q+L++ L + + + + Q + + N+ HPDVPVGGE+ +
Sbjct: 61 KAQGDEKQELLKRTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEEDFAL 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG L D + AA+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFEAEGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR ++ GF + A VY ++ D L+GT+E+ + G H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQAMDGTGFLGQ-AGQDVYHLKDDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S++ H
Sbjct: 240 MDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SLGL F+++
Sbjct: 300 RLLEWEKQWLTSLGLPFRVI 319
>gi|451332640|ref|ZP_21903229.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
gi|449424787|gb|EMD30072.1| Seryl-tRNA synthetase [Amycolatopsis azurea DSM 43854]
Length = 396
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 171/292 (58%), Gaps = 13/292 (4%)
Query: 110 MLNVQKEVDRLREERNAVANKMK------GKLEP----SERQKLIEEGKNLKEGLVTLEE 159
M++ +D R A AN ++ GKL P ER L+ + K+L + E
Sbjct: 1 MVDKLLSLDSRRRSSIAAANTLRAEQKSLGKLVPKAQGDERAALLAKAKDLAAQVKAAEV 60
Query: 160 DLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDI 219
+ + ++E +Q + +PN+ HPD P GGED ++ K VG P F+F KDH +L + L
Sbjct: 61 EQTEASEEFEQLHRVVPNLVHPDAPEGGEDDYVVLKHVGEPKKFDFTPKDHLELCEGLGA 120
Query: 220 FDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGF 279
D + A+VSGS+FY+L L++GL+N +++ GFTP+ TP +VR ++ GF
Sbjct: 121 LDMERGAKVSGSRFYFLTGIGAQLQLGLLNMAIAQATANGFTPMITPTLVRPEIMAGTGF 180
Query: 280 QPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAA 338
GA+ ++VY + D L+GT+E+P+ G H D IL P +YA +S C+R EAG+
Sbjct: 181 L--GAHSSEVYRLRDDDLYLVGTSEVPLAGYHADEILDLGKGPKRYAGWSSCYRREAGSY 238
Query: 339 GTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
G TRG+ RVHQF K+EMFV+ +PE++++ H L+ EE + + + + ++++
Sbjct: 239 GKDTRGIIRVHQFDKVEMFVYTRPEDAEAEHARLLDWEEQMLAKIEVPYRVI 290
>gi|261872052|gb|ACY02860.1| seryl-tRNA synthetase 1 [Streptomyces sp. ATCC 700974]
Length = 424
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 185/320 (57%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N + V A+ R+R + +L + +L + E + D LR E+ ++ K+
Sbjct: 2 IDLRLLRENPDRVRASQRSRGEDVDLVDALLSVDELRRSSGVRFDGLRAEQRSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK V + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERAELLKKAEQLKAD-VKADAAQDEAAADAKRLLLQLGNIVHEDVPVGGEEDFVV 119
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 120 LETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 180 AIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 239 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 299 RLLEWEKQWLTGLELPFQVI 318
>gi|348175400|ref|ZP_08882294.1| seryl-tRNA synthetase [Saccharopolyspora spinosa NRRL 18395]
Length = 420
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 190/318 (59%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ EAV A+ R R +A+L + +L E+ + + D LR E+ + ++ G
Sbjct: 2 IDLKTLRDDPEAVRASQRARGEDASLVDALLSADERRRSAVSQADNLRAEQKQLGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + +R+ L+ K L + E + +EL + + + N+ PDVP GGED +
Sbjct: 61 KAKGEDREDLLTRAKELAAQVKEAEAEQSAADEELLRSQKAVSNVVEPDVPPGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F +KDH +LG A+ FD + A+V+G++FY+L LE+ L+N +
Sbjct: 121 LEHVGVPREFDFEIKDHVELGTAIGAFDMERGAKVAGARFYFLTGIGAQLELALLNMAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT + P +VR ++E GF GA+ T+VY +E D L+GT+E+P+ G H
Sbjct: 181 QAAAAGFTLVVPPVLVRPEIMEGTGFL--GAHATEVYRLEEDDLYLVGTSEVPLAGYHAG 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF+KLEMFV+C+ +E+ H+ L
Sbjct: 239 EIVDLSAGPLRYAGWSTCFRREAGSYGRDTRGIIRVHQFNKLEMFVYCRADEARDEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 299 LAWEEEMLAKIEVPYRVI 316
>gi|353227400|emb|CCA77910.1| related to mitochondrial seryl-tRNA synthetases [Piriformospora
indica DSM 11827]
Length = 515
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 188/361 (52%), Gaps = 18/361 (4%)
Query: 46 RAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRN--SNANL-EL 102
R + +++ T G + P + +D+K I +N+ NI NR + NL E
Sbjct: 20 RVLHSRSIKNTRTVPPDGAINTLPPPR--LDYKSIIENEAYHVQNIANRKLPGSGNLVEK 77
Query: 103 VLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSER----QKLIEEGKNLKEGLVTLE 158
V EL++ ++ V+ +R+ERN +A +K +R Q+ KN+K+ L E
Sbjct: 78 VKELHQLHSSLVAGVNEIRQERNTLARNVKMAKTSEDRAAALQRANSRSKNIKDFLAIQE 137
Query: 159 EDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALD 218
+L IPN+THPD PVG E + + T G + +DH ++GK L
Sbjct: 138 PMTSGAEIQLLHAGLQIPNITHPDSPVGPESAAKVLSTHGPERLPTDAARDHAKVGKELG 197
Query: 219 IFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCG 278
I FD AA V+GS +YYL+ +LE L+N+ L IK GFTP+ P+++++ +CG
Sbjct: 198 IISFDEAAAVTGSAWYYLRGAGALLEQALVNYALQIAIKHGFTPVIPPDVIKADYAARCG 257
Query: 279 FQPRGANTQ-------VYSIEGADQCLI--GTAEIPVGGIHMDSILSESLLPLKYAAFSH 329
F PR Q Y ++G L+ GTAEIP+ G+ E LP + A H
Sbjct: 258 FAPRDEPDQHGKVVHHFYHLQGTSNNLVLAGTAEIPLAGMFAQRTFLERELPARVVAVGH 317
Query: 330 CFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKL 389
FR+EAG+ G TRGLYRVHQF+K+E+F + +S EEL +I+ +++ LG F++
Sbjct: 318 AFRSEAGSRGAVTRGLYRVHQFTKVELFAVTEQNQSSDMMEELRKIQIEIFGGLGFPFRV 377
Query: 390 L 390
L
Sbjct: 378 L 378
>gi|367034572|ref|XP_003666568.1| hypothetical protein MYCTH_2311368 [Myceliophthora thermophila ATCC
42464]
gi|347013841|gb|AEO61323.1| hypothetical protein MYCTH_2311368 [Myceliophthora thermophila ATCC
42464]
Length = 541
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 187/352 (53%), Gaps = 33/352 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREE----R 124
KA +D K IR N + + N R RN +A + EL+ + Q+E LRE R
Sbjct: 78 KAVLDIKHIRQNPDLYAENCRQRNYHAAAAYPARINELFAQWQAKQREGRSLRERGNLLR 137
Query: 125 NAVANKMKGKLEPSE---------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
+AN + E E R++L+EE + +K L +EE L+ E+Q+ A I
Sbjct: 138 RQLANPGTTRDEADEEAAGLRSLSREQLLEEARKVKTELSAIEEAESALSAEMQRLALAI 197
Query: 176 PNMTHPDVPVGGEDCSII----RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
PN+T P G E + +P + + H +G L I DF AA SG
Sbjct: 198 PNLTSDATPRGSEPTVLSYINDHPKTASPDSSDRVWRSHVHIGAELGILDFAGAASTSGW 257
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+Y+L +EA LE L+N+ L+ + G+ ++ P +V S + CGFQPR N TQ+Y
Sbjct: 258 GWYHLLDEAAQLEQALVNYALTAATRAGWRQVSPPSMVYSHIAGACGFQPRDVNGETQIY 317
Query: 290 SI-EGADQ--------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
+I + AD CL GTAEIP+ G+ D++L E+ LPLK A S CFR EAGA G
Sbjct: 318 TIAQDADDAARGRPELCLAGTAEIPLAGMKADTVLDEADLPLKRVAASRCFRAEAGARGA 377
Query: 341 ATRGLYRVHQFSKLEMFVFCQPEES--DSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+E+F + P+ +E++ ++ +L+ SLGLH ++L
Sbjct: 378 LTKGLYRVHEFTKVELFAWTGPDAHAVGDVFDEMVDLQTELHGSLGLHCRVL 429
>gi|291452730|ref|ZP_06592120.1| seryl-tRNA synthetase [Streptomyces albus J1074]
gi|291355679|gb|EFE82581.1| seryl-tRNA synthetase [Streptomyces albus J1074]
Length = 423
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 188/324 (58%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI----PNMTHPDVPVGGE- 188
K E+ +L+++ L + + + DE QEA+ + N+ HPDVPVGGE
Sbjct: 61 KATGDEKTELLKKAGELSAAVKAADAE----KDEADQEAKQLLLRLGNLVHPDVPVGGEE 116
Query: 189 DCSIIRK--TVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D +++ K T+ + + F +DH +LG+AL D + AA+VSGS+FYYL +LE+
Sbjct: 117 DFAVLAKHGTIRDFAAEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N +++ GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+
Sbjct: 177 LVNAAIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAE-DVYHLEKDDFYLVGTSEVPL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
HMD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + +PE+++
Sbjct: 236 AAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAE 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ H+ L+ E SL L F+++
Sbjct: 296 AEHQRLLDWEIQWLQSLELPFQVI 319
>gi|21222366|ref|NP_628145.1| seryl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289770434|ref|ZP_06529812.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
gi|8928384|sp|Q9ZBX1.1|SYS_STRCO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3928737|emb|CAA22233.1| seryl-tRNA synthase [Streptomyces coelicolor A3(2)]
gi|289700633|gb|EFD68062.1| seryl-tRNA synthetase [Streptomyces lividans TK24]
Length = 425
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+ G
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGL-GKLIG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L++ + LK + + + E Q+ Q + N+ HPDVPVGGE+ +
Sbjct: 61 KAAGDEKAELLKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F +DH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTHRDFAAEGFEPRDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|359150743|ref|ZP_09183562.1| seryl-tRNA synthetase [Streptomyces sp. S4]
Length = 423
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 188/324 (58%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI----PNMTHPDVPVGGE- 188
K E+ +L+++ L + + + DE QEA+ + N+ HPDVPVGGE
Sbjct: 61 KATGDEKTELLKKAGELSAAVKAADAE----KDEADQEAKQLLLRLGNIVHPDVPVGGEE 116
Query: 189 DCSIIRK--TVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D +++ K T+ + + F +DH +LG+AL D + AA+VSGS+FYYL +LE+
Sbjct: 117 DFAVLAKHGTIRDFAAEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N +++ GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+
Sbjct: 177 LVNAAIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAE-DVYHLEKDDFYLVGTSEVPL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
HMD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + +PE+++
Sbjct: 236 AAYHMDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAE 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ H+ L+ E SL L F+++
Sbjct: 296 AEHQRLLDWEIQWLQSLELPFQVI 319
>gi|291438592|ref|ZP_06577982.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291341487|gb|EFE68443.1| seryl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 425
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKAL-GKLVP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ + LK + + D E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KATGDEKAELLKKAEQLKADVKAADADRDAAAAETQELLLKLGNLIHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTVRDFAAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PEES + H+
Sbjct: 240 MDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEESQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|357412315|ref|YP_004924051.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
gi|320009684|gb|ADW04534.1| seryl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 425
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 181/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ LK G+ + + E ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERAELLKKADQLKAGVKAADAAQDEADAEAKRLLLQLGNIVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFVPMITPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA +S CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIDADKLPLRYAGYSPCFRREAGTYGKDTRGIFRVHQFEKVEMFSYVDPTDAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLDWEKQWLTGLELPFQVI 319
>gi|284988898|ref|YP_003407452.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
gi|284062143|gb|ADB73081.1| seryl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
Length = 433
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 176/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R ++ + ++ +L K D LR E+ A + +K
Sbjct: 2 IDLRLVREHPDLVKASQRARGADESRVDELLAADAARREAVKRTDDLRAEQKAASQAVK- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER +++ + L + EE L L+ I N+ H VP GGED ++
Sbjct: 61 KASSEERPAVLDRARALAAEVKDAEEALRGADAALRAAHLRIANVVHDGVPPGGEDDAVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG ++FPV+DH ++G+AL D + A+VSG++FY+L MLE L +
Sbjct: 121 LRTVGEVPAYDFPVRDHLEIGEALGAIDTERGAKVSGARFYFLTGPGAMLEFALAQLAIG 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFTP+ P +VR +E GF + +VY +E D L+GT+E+ + G+ +
Sbjct: 181 QAVSAGFTPVVAPALVRPEAMEGTGFLGE-HDEEVYRVERDDLYLVGTSEVALAGMRSNE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L S PL+YA +S CFR EAG+ G TRG+ RVH F K+EMF FC+PE++ H L+
Sbjct: 240 VLDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHWFDKVEMFSFCRPEDAAEEHRRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
EE+ +L L ++++
Sbjct: 300 AWEEEFLQALELPYRVV 316
>gi|406958708|gb|EKD86280.1| hypothetical protein ACD_37C00378G0002 [uncultured bacterium]
Length = 426
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 183/321 (57%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K++R+N E V +++ ++ +LE+ K + +V REERN ++
Sbjct: 2 IDIKYLRENSEKVQKAAKDKGIEVDIAHILEIDSKYRELSIKVQNFREERNKWSSLKSPN 61
Query: 135 LEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
L S + + E+GK +K+ L LE+ L + +EL+ IPN DV +G ++
Sbjct: 62 LPHSLIKGEETVREQGKRIKDELQKLEKALKAVDEELRSWLLKIPNPAKDDVKIGKDESG 121
Query: 192 --IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++RK+ G P+ F+F KDH +G+ALDI D + A++VSGS+F YLKNE V+LE ++
Sbjct: 122 NEVVRKS-GEPTRFDFTPKDHLDIGEALDIIDIERASKVSGSRFAYLKNEGVLLEFAIVQ 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ L ++ GF P+ P +V++ V+ G+ G + ++ I + L+GTAE + +
Sbjct: 181 FALETLVGEGFRPVVPPVLVKTDVMRGLGYMENGGDEDMFHITSDNLTLVGTAEHSIVPM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
HMD + + LP +Y FS FR EAG+ G TRG+ RVHQF K+EM + E D
Sbjct: 241 HMDEVFALKDLPRRYVGFSTAFRREAGSYGKDTRGILRVHQFDKVEMVSYVAEGEDDREQ 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E L+ +EE L+ +L + ++++
Sbjct: 301 EYLLSLEEKLFQALEIPYQVI 321
>gi|383821245|ref|ZP_09976492.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
gi|383333573|gb|EID12023.1| seryl-tRNA synthetase [Mycobacterium phlei RIVM601174]
Length = 419
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ R R + +L + +L+ D LR E+ A + K+ G
Sbjct: 2 IDLKLLRENPDAVRASQRARGEDPSLVDKLLDADAARRAAVSAADNLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+E+ K L E + E D + I N+ VP GGED ++
Sbjct: 61 KAAPEERPALLEQAKALAEKVRAAEADQAEAEKAFTAAHMAISNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P + P KDH +LG++L + D + A+VSG++FY+L +L++GL+
Sbjct: 121 LDTVGEPPRIDNP-KDHVELGESLGLIDLERGAKVSGARFYFLTGAGALLQLGLMQLAAR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
GFT L P +VR V+ GF GA+ + VY +E D L+GT+E+P+ G H D
Sbjct: 180 LATDNGFTLLIPPVLVRPEVMSGTGFL--GAHAEEVYRLEADDMYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FVFC+PEE+++ HE L
Sbjct: 238 EIIDLSDGPRRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVFCKPEEAEAEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ ++ ++ + + + ++++
Sbjct: 298 LNLQREMLAKIEVPYRVI 315
>gi|320163573|gb|EFW40472.1| seryl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 540
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 189/370 (51%), Gaps = 54/370 (14%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA--------NLELVLELYEKMLNVQKEVDRLREERNA 126
+D+ WI N E V +++ R A N EL+E+ +Q++ D LR RN
Sbjct: 27 LDYAWIAANAETVERHLQLRQMAAVSEDGVPFNAAHFRELFERNRLLQRKSDDLRAMRNK 86
Query: 127 VA-------------------NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDE 167
++ K + ++ E+ +++K+ + + L ++ +
Sbjct: 87 LSATYTKPTGAARPAGAPAGTQKDAANTAADAKVQIAEQARSIKKEIADADAALEEVAAQ 146
Query: 168 LQQEAQCIPNMTHPDVPVG--------------GEDCSIIRKTVGNPSV------FNFP- 206
L A +PN HPDV G + ++ PS+ P
Sbjct: 147 LFHAAVRVPNDAHPDVANGPNVERVVAVSSRLTAQQETLAASLDARPSLPAHSDPSRIPP 206
Query: 207 --VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLT 264
KDH +LG AL +FD + AA V+G FY+LK +LE+ L + + + GFTP+T
Sbjct: 207 TKYKDHVELGLALGLFDLERAAAVTGHAFYFLKGAGALLELALTQLAMQQAMLAGFTPMT 266
Query: 265 TPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVGGIHMDSILSESLLPL 322
TP++ R+ +V CGFQPRG TQVYS+ L+GTAEIP+ G ++ ++ LP+
Sbjct: 267 TPDVARTEMVAACGFQPRGEMTQVYSLAAPHDRFSLVGTAEIPLAGFLSNTTVATQALPV 326
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLY 380
K AA SHCFR+E GA G+ TRGLYRVHQFSK+EMF F P +DS + ++++++ ++
Sbjct: 327 KLAALSHCFRSETGAHGSDTRGLYRVHQFSKVEMFAFTGPSVADSQAMLDSIVQVQKQIF 386
Query: 381 SSLGLHFKLL 390
SL L F++L
Sbjct: 387 ESLELDFRVL 396
>gi|302552608|ref|ZP_07304950.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
gi|302470226|gb|EFL33319.1| seryl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
Length = 425
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + E Q+ Q + N+ HPDVPVGGE+ +
Sbjct: 61 KASGDEKAELLKKASRLAAEVKAADAERDAAATETQELLQRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGQILGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY + D L+GT+E+P+ H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLADDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|336325083|ref|YP_004605049.1| seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
gi|336101065|gb|AEI08885.1| Seryl-tRNA synthetase [Corynebacterium resistens DSM 45100]
Length = 424
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 186/320 (58%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + A ++ +LE + D R E+ A + M
Sbjct: 2 IDLKLLRENPDVVRASQRTRGEDPALVDQLLEADARRREAISAADAARAEQKAFSKSMGQ 61
Query: 134 KLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
++ + E+ L E+GK E + +E + + + N+ P GGED
Sbjct: 62 QMRTASDEEKAALREQGKAKAEAVKAVEAKQAEAEQAVHDLQMKLSNVVEEGAPAGGEDD 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + VG P+ F+F KDH +LG++L + D +VSG++FY+L + +L++G++
Sbjct: 122 FVVLEHVGEPTEFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQLGMLQL 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++RGFT + P +VR V+ GF A+ ++Y +E D L+GT+E+ + G H
Sbjct: 182 AAQKAVERGFTLMIPPVLVRPEVMAGTGFLGAHAD-EIYHLEEDDLYLVGTSEVALAGYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ + P++YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ S H+
Sbjct: 241 SDEIIDLNKGPVRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEEAQSIHQ 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
EL+++E+D+ +++ + ++++
Sbjct: 301 ELLQMEKDMLAAIEVPYRVI 320
>gi|411003781|ref|ZP_11380110.1| seryl-tRNA ligase [Streptomyces globisporus C-1027]
Length = 425
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + +L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRNEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERTELLKKAEQLKADVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLEWEKQWLTGLELPFQVI 319
>gi|84495480|ref|ZP_00994599.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649]
gi|84384973|gb|EAQ00853.1| seryl-tRNA synthetase [Janibacter sp. HTCC2649]
Length = 426
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V A+ R R + ++ + VL EK N ++LR E+ A+ ++
Sbjct: 2 IDLKLLRDNPDRVRASQRARGEDESVVDAVLAAEEKRRNSLTAFEQLRAEQKAMGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ K + + + + EL + + I N+ VPVGGED ++
Sbjct: 61 QAQGDEKQALLARTKEISAQVKLNQTTADEAAGELDRLQRSIGNVIEDGVPVGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T+G P F F KDH L + LD D + A+VSGS+FY+LK LEM ++
Sbjct: 121 LETIGAPRDFAAEGFEPKDHLTLFEGLDALDMERGAKVSGSRFYFLKGVGARLEMAMLQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ I+ GF P+ TP +V++ V+ GF A+ +VY +E D L GT+E+ + G H
Sbjct: 181 AMTKAIEAGFVPMITPTLVKAEVMAGAGFIDHHAD-EVYRLEADDLYLTGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ + P+++A S C+R EAG+ G TRG+ RVHQF+K+EMFV+C+PE++ H+
Sbjct: 240 ADEIIDLAKGPIRFAGQSTCYRREAGSYGKDTRGIIRVHQFNKIEMFVYCRPEDATDEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+++ + L ++++
Sbjct: 300 KLLAFEKEMLDLMELPYRVI 319
>gi|365864768|ref|ZP_09404447.1| seryl-tRNA synthetase [Streptomyces sp. W007]
gi|364005808|gb|EHM26869.1| seryl-tRNA synthetase [Streptomyces sp. W007]
Length = 425
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 184/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + +L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRAEQRSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERAELLKKAEQLKANVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH ++G+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLEIGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A+ VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFIPMLTPALVRPRAMEGTGFLGQ-ASENVYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIDAGKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLDWEKQWLTALELPFQVI 319
>gi|256389475|ref|YP_003111039.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
gi|256355701|gb|ACU69198.1| seryl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
Length = 425
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R + E V A+ R R + A ++ +L E D LR E+ + ++
Sbjct: 2 IDLRLLRTDPERVRASQRARGEDPALVDALLSADEARRAAVSRFDTLRNEQKVLGKQIP- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+E+ K L +G+ E D + D L+Q + N+ VP GGED ++
Sbjct: 61 KAAGEEKAALLEQAKKLADGVKAAEADQHEADDVLKQLQLSLSNVVIDGVPEGGEDDFVL 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
R+TVG P F F +DH +LGK L D + +V G++ YYL +LE+ L+N
Sbjct: 121 RETVGTPRDFAADGFEPRDHVELGKLLGAIDLERGVKVGGARQYYLTGVGALLEIALLNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +V+ + GF + A VY + D L+GT+E+P+ H
Sbjct: 181 AMAQATTYGFTPMITPSLVKPEAMAGTGFLGQAAEN-VYHLTEDDMYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL + LPL+YA +S C+R EAG+ G TRG+ RVHQF K+EMF + PEE+++ H
Sbjct: 240 MDEILDAAKLPLRYAGYSSCYRREAGSYGKDTRGIIRVHQFEKVEMFSYVLPEEAEAEHL 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E++ ++L + F+++
Sbjct: 300 RLLGWEKEFLTALEIPFRVI 319
>gi|376255294|ref|YP_005143753.1| seryl-tRNA synthetase [Corynebacterium diphtheriae PW8]
gi|372118378|gb|AEX70848.1| seryl-tRNA synthetase [Corynebacterium diphtheriae PW8]
Length = 419
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +LE EK K D LR E A K+
Sbjct: 2 IDLKFLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + ++ + N+ D P GGED I+
Sbjct: 61 QASPDERPALLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVV-TDAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR V+ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEVMSGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHQD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+ L
Sbjct: 238 EIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E D+ +++ + ++++
Sbjct: 298 LNMERDMLAAVEVPYRII 315
>gi|333917771|ref|YP_004491352.1| seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333479992|gb|AEF38552.1| Seryl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 419
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 189/318 (59%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R++ EAV A+ R R +A L + +L+ + + D LR E A+ ++ G
Sbjct: 2 IDLKFLREDPEAVRASQRARGEDAGLVDTLLQADTERRSAVASADNLRAEHKALGRRI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P +R +L++ L + + E D D +QQ + I N+ HPDVPVGGE +
Sbjct: 61 KASPEDRAELLDGAAKLAQRVKDAEADESAANDRMQQAHRAISNIVHPDVPVGGEADFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG P P KDH +LG++L + D + A+VSG++FY+L +L++GL+ +
Sbjct: 121 LETVGEPRSIENP-KDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGLLQLAIQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GFTP+ P +VR ++ GF GA+ +VY + D L+GT+E+P+ G H
Sbjct: 180 KAVAAGFTPMIPPVLVRPEIMSGTGFL--GAHAAEVYHLADDDLYLVGTSEVPIAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+P+E+ + H L
Sbjct: 238 EILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSYCRPDEATAEHNRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ S++ + ++++
Sbjct: 298 LGWEKDMLSAIEVPYRII 315
>gi|238581344|ref|XP_002389579.1| hypothetical protein MPER_11273 [Moniliophthora perniciosa FA553]
gi|215451998|gb|EEB90509.1| hypothetical protein MPER_11273 [Moniliophthora perniciosa FA553]
Length = 487
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 189/331 (57%), Gaps = 16/331 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNS---NANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+++K I +N S N NR + +E V+ LY++ V++++D R ER+ + +
Sbjct: 37 LNYKDIAENSVYKSINALNRKAPLPTDGVESVVRLYKEFRTVKQKLDAKRNERSVIGETI 96
Query: 132 ----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K K + + + K+LKE + LE ++ +E+ + A +PN THP P+G
Sbjct: 97 ERCAKSK-DADGKAAALRTAKDLKEAIFELEIAASRIENEMLELALVVPNDTHPSSPLGP 155
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E ++ G S+ +DH + + LD+ DF++ ++V+GS +YYL NEA +LEM L
Sbjct: 156 ETAAVTLDIRGPSSLPADSNRDHATIARKLDLIDFESGSKVTGSSWYYLMNEAAVLEMAL 215
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN----TQVYSIEG----ADQCLI 299
N+ LS I+ G+TP+TTP++VRS + +CGFQPR + +Q Y ++ +D L
Sbjct: 216 TNYALSVAIRDGYTPVTTPDVVRSDIARRCGFQPRDHSVPPVSQAYHLQSTSSYSDLILA 275
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
T+EIP+ G+ + + PLK H FR EAGA+GT TRG+YRVHQF+K+E+F
Sbjct: 276 ATSEIPLAGMFANRLYKSPSFPLKVVGVGHAFRAEAGASGTDTRGIYRVHQFTKVELFTV 335
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES+ E + +++D+ L + +++L
Sbjct: 336 TTSEESEEMMEGMRVVQQDILDGLRIPYRVL 366
>gi|406926507|gb|EKD62714.1| hypothetical protein ACD_52C00082G0001 [uncultured bacterium]
Length = 423
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 188/323 (58%), Gaps = 11/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IRDN E V + + + + VLE EK + +V+ L+ ERN + + G
Sbjct: 2 LDTQFIRDNPEKVKEATEQKGVDRKVVDRVLEADEKRRELIGKVEELKRERNELLKGVTG 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K P E + +GK +K+ L LE +L K+ + +Q + IPN DV G ++ +
Sbjct: 62 K--PDEVT--LAKGKKIKKELAKLEPELKKVEGKFEQLMREIPNPPAEDVKPGKDESENE 117
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ +T G F F KDH +G+ALDI D + AA+VSG++F YLK AV+LE+ LI + L
Sbjct: 118 VLRTWGKKPEFEFEPKDHLVIGEALDIIDVERAAKVSGTRFGYLKGTAVLLELALIQFAL 177
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGF-QPRGANTQVYSIEGADQ----CLIGTAEIPVG 307
+ K GF P+ P +++ + EK G+ + G + +E +++ L+GTAE +
Sbjct: 178 ETLTKEGFIPVIPPVLIKKDMTEKLGYWEHEGHGDYYWVLEPSEEQKGFYLVGTAEHSIV 237
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+H D ++ S LP +Y AFS CFR EAG+ G TRG++RVHQF K+EM +PEESD
Sbjct: 238 PMHRDEVIRASELPKRYVAFSSCFRREAGSYGKDTRGIFRVHQFDKVEMVSITKPEESDK 297
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
HE L+ +EE L+ +L L ++++
Sbjct: 298 EHEYLLSLEEKLFQALELSYQVV 320
>gi|239989205|ref|ZP_04709869.1| seryl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291446211|ref|ZP_06585601.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
gi|291349158|gb|EFE76062.1| seryl-tRNA synthetase 1 synthetase 1 [Streptomyces roseosporus NRRL
15998]
Length = 425
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + +L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDLVDALLSADELRRSSGVRFDELRNEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERTELLKKAEQLKADVKAADAAQDEADADAKRLLLQLGNIVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG++L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLEWEKQWLTGLELPFQVI 319
>gi|452983692|gb|EME83450.1| hypothetical protein MYCFIDRAFT_203642 [Pseudocercospora fijiensis
CIRAD86]
Length = 579
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 190/353 (53%), Gaps = 30/353 (8%)
Query: 66 AVKPQW--KAAIDFKWIRDNKEAVSANIRNRNSNA---NLELVLELYEKMLNVQKEVDRL 120
A +P + K +D K IR N +RN A N +LEL+EK +QKE L
Sbjct: 28 ATRPSFAPKPVLDLKHIRQAPGLYEQNCEDRNYKAFSKNSWKILELHEKTAQLQKEAVGL 87
Query: 121 REERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
R+ NA+ + + K + + E K +K+ L E ++ +E+++ A +PN++
Sbjct: 88 RQRSNAIGKERQQKHDGDGGEGWRGEAKEIKKKLQDFEAREKEMKEEMEKLALELPNLSS 147
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEA 240
PVG E +R+ +G K H ++GK LDI DF+A+A SG +Y+LKNE
Sbjct: 148 VYTPVGEE--PTVREEIGTRRPEKSSGKSHVEIGKELDILDFEASATTSGWGWYFLKNEG 205
Query: 241 VMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI---EGAD 295
+LE LI + LS +KRG+ LT P +V + CGF PR N TQ+Y I EG D
Sbjct: 206 ALLEQALIQYALSVAMKRGWKVLTPPSLVYEHIAHACGFMPRDQNGETQIYEISGEEGHD 265
Query: 296 Q---CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFS 352
+ L GTAEIP G + LS S LPLK S C+R EAGA G T+GLYRVH+F+
Sbjct: 266 KPKLVLAGTAEIPFAGSQANKTLSASDLPLKVIGPSRCYRAEAGARGVDTKGLYRVHEFT 325
Query: 353 KLEMFVFCQP---------------EESDSYHEELIRIEEDLYSSLGLHFKLL 390
K+EMF + P ++S+ EE++ +++++ SSLGLH K+L
Sbjct: 326 KVEMFAWTAPPPSPDEDRFGMEEERDQSEQVFEEMLEMQKEILSSLGLHAKVL 378
>gi|398784224|ref|ZP_10547502.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
gi|396995398|gb|EJJ06414.1| seryl-tRNA ligase [Streptomyces auratus AGR0001]
Length = 429
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVELVDALLSADERRRSSSVRFDELRAEQKSLG-KLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+++ L + + + +E QQ + N+ HPDVPVGGE+ +
Sbjct: 61 KASGDEKAALLKKAGELSAAVKAADAAQDEAKEETQQLLLKLGNLVHPDVPVGGEEDFTV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH ++G+ L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFTAEGFEPKDHLEIGELLGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ + LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PE++ + H+
Sbjct: 240 MDEIVDAAKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVTPEDAQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ + L L F+++
Sbjct: 300 RLLDWEKQWLTGLELPFQVI 319
>gi|398409134|ref|XP_003856032.1| hypothetical protein MYCGRDRAFT_34973 [Zymoseptoria tritici IPO323]
gi|339475917|gb|EGP91008.1| hypothetical protein MYCGRDRAFT_34973 [Zymoseptoria tritici IPO323]
Length = 506
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 190/357 (53%), Gaps = 41/357 (11%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR+ N +RN N +LEL+EK++ Q+EV +LR+ N +
Sbjct: 35 KPVLDLKHIRNAPGLYEQNSIDRNYAPVAGNGWRILELHEKLVAAQREVVKLRQRSNDIG 94
Query: 129 NKM-----KGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
+M KG E + + L+EE K+LK L + + ++ +E+++ A +PN++
Sbjct: 95 KEMGRHAAKGSAEVAGAESKSALLEEAKSLKARLAKYDVEDKEMQEEMERLALELPNLSS 154
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEA 240
PVG E+ S++ V N K H +GK LDI DF+A++ SG +Y+LK+E
Sbjct: 155 LHTPVG-EEPSVV--DVINERPEGLTTKSHVDIGKELDILDFEASSITSGWGWYFLKHEG 211
Query: 241 VMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI------- 291
+LE LI + LS +KRG+ +T P +V S + CGF PR N TQ+Y+I
Sbjct: 212 SLLEQALIQYALSVAMKRGWNVMTPPSLVYSHIASACGFMPRDQNGETQIYNIAQHEHEK 271
Query: 292 --EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVH 349
E L GTAEIP G ++ L LPLK S C+R EAGA G T+GLYRVH
Sbjct: 272 SGEKPSLVLTGTAEIPFAGTQVNKTLDSRDLPLKVIGPSRCYRAEAGARGVDTKGLYRVH 331
Query: 350 QFSKLEMFVFCQP----------------EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+F+K+EMF + P ++D EE+I I+ ++ +SLGLH K+L
Sbjct: 332 EFTKVEMFAWSAPSTDPEGDRFGGSASSGSQTDKVFEEMIDIQREILTSLGLHAKVL 388
>gi|406944877|gb|EKD76528.1| hypothetical protein ACD_43C00071G0001 [uncultured bacterium]
Length = 417
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 186/320 (58%), Gaps = 10/320 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-G 133
+D K+IR++ AV A ++N+NS +++ +L++ E +QK D L +RN +A K G
Sbjct: 2 LDIKFIREHISAVKAAVQNKNSKVDIDALLQIDETRRQLQKAGDELNRQRNQMAALGKQG 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K P + + E K +K+ LE+ LV + E ++ +PN+ D P+G E +
Sbjct: 62 KPTPEQ----VAEAKVIKQRSAELEQTLVGVEAEYKKMMYQVPNIPSADTPIGPDESGNQ 117
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K G+ VFNF K H++LGK LDI D + AA V+G++F YLKNE ++E L+N L
Sbjct: 118 VIKEWGSKPVFNFVPKPHWELGKTLDIIDNEQAAVVTGARFTYLKNELALMEYALVNLAL 177
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCG-FQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
S + +GF P+ P +R V EK G P + Y I D LIG+AE +G + M
Sbjct: 178 SVTVTKGFIPIIPPIFIRPDVFEKMGRLHP---TDERYYIPSDDLYLIGSAEHTLGPLQM 234
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ +L E LPL+Y AFS R EAGAAG TRG+ R+HQF K+EM VF E+ + H
Sbjct: 235 NKLLIEEQLPLRYIAFSPALRREAGAAGKDTRGILRLHQFHKVEMEVFSTAEQGLAEHNL 294
Query: 372 LIRIEEDLYSSLGLHFKLLL 391
LI IEE+L L L +++LL
Sbjct: 295 LISIEEELLQKLNLPYQVLL 314
>gi|406971431|gb|EKD95516.1| hypothetical protein ACD_24C00461G0001, partial [uncultured
bacterium]
Length = 321
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 141/222 (63%), Gaps = 2/222 (0%)
Query: 175 IPNMTHPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKF 233
+PN DVP+ GE + + K G P+ F+F +DH LG+ LD+ D D +VS S F
Sbjct: 2 VPNPAFDDVPIAKGESGNQVLKKWGEPTKFSFIPQDHVSLGEKLDLIDIDRGTKVSQSGF 61
Query: 234 YYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG-ANTQVYSIE 292
Y+LKNE +LE+ LI++ + +++KRGF P+ TPE+V ++ G++ R Q+Y +E
Sbjct: 62 YFLKNECALLELALISYVMGKLVKRGFVPVITPELVNEKIIGGTGYKARSEKERQIYKVE 121
Query: 293 GADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFS 352
G D LI TAEI + G H + IL+ LPLKYA FS CFR E G+ G RG+ RVH+F
Sbjct: 122 GEDLHLIATAEITLVGQHANEILAAKTLPLKYAGFSSCFRVERGSYGKDVRGIIRVHEFD 181
Query: 353 KLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLA 394
K+EM FC+P ES +HEE + IEE+++ L + ++++L +
Sbjct: 182 KVEMVTFCKPGESKKFHEEFLAIEEEIFQELKIPYQVILICS 223
>gi|345000931|ref|YP_004803785.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
gi|344316557|gb|AEN11245.1| seryl-tRNA synthetase [Streptomyces sp. SirexAA-E]
Length = 425
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 181/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADELRRSSGVRFDELRSEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ LK + + + E ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERTELLKKADQLKTEVKAADAARDEADAEAKRLLLLLGNVVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG++L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGESLGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIEADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLDWEKQWLTALELPFQVI 319
>gi|403251675|ref|ZP_10918005.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
gi|402915025|gb|EJX36018.1| seryl-tRNA synthetase [actinobacterium SCGC AAA027-L06]
Length = 420
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 185/321 (57%), Gaps = 10/321 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N EA + + R + A ++ +L + E + LR E+N + +K G
Sbjct: 2 IDLKALRENPEAFKNSQKVRGEDPAIVDQLLAADDARREAISEFESLRAEQNTL-SKAVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
+ E+ L+E K L + + + + + + A I N+ P P+GGE D +
Sbjct: 61 AAKGDEKNSLLENAKQLATAVKSADAKRAEAEETANKLALLIANLIDPAAPIGGEADFKV 120
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
I K VG P F F KDH ++GK + D + A+V+G++ YYL +LE+ L+N
Sbjct: 121 IEK-VGTPRDFKAEGFEPKDHVEIGKIIKAIDTERGAKVAGARSYYLTGVGALLELALVN 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ +S +K GF P+ P +V+ + +E GF + A VY ++ + L+GT+E+P+
Sbjct: 180 YAISLAVKAGFIPMIPPVLVKPAAMEGTGFLGQAAEN-VYHLKEDELYLVGTSEVPLAAY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
HMD IL + LP++YA +S CFR EAG+ G TRG+ RVHQF K+EMF FC+PE++ + H
Sbjct: 239 HMDEILEQ--LPIRYAGYSPCFRREAGSYGKDTRGIIRVHQFEKVEMFTFCKPEDAQAEH 296
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L++ E+D + SL + ++++
Sbjct: 297 EKLLKWEKDFFDSLEIPYQVI 317
>gi|406949672|gb|EKD80104.1| hypothetical protein ACD_40C00203G0003 [uncultured bacterium]
Length = 413
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 180/318 (56%), Gaps = 14/318 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IRDN E V ++ + N+ + ++E+ K + + + LR ++N + G
Sbjct: 2 LDIQFIRDNAEKVKQATSDKGFDPNVVDELIEVDVKRRELIGQTEALRAKKNKL-----G 56
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + +E+G+ LK L TLE L + ++ + +PN + DV VGGE + +
Sbjct: 57 KDD-------VEKGRALKHELKTLEVKLGAVNEKYHELMLRVPNPSARDVKVGGEADNEV 109
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+FPV+DH LG D + +V+ S FYY+K V++E LI + +
Sbjct: 110 VRQVGKIRKFDFPVRDHLDLGVLTGTIDIPSGTKVAQSGFYYVKGPGVLIEFALIQYAMR 169
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRG-ANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++ ++GF P+ TP + V CGFQ R Q+Y +EG D LI TAEI + H D
Sbjct: 170 KLAQKGFIPVITPNVANEKSVIGCGFQARSDKERQIYHVEGEDLDLIATAEITLVAQHAD 229
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
+ + LP KYA +S C+R E G+ G RG+ RVH+F K+EM VFC PE+SD+ HE+L
Sbjct: 230 TTFTVGELPKKYAGYSSCYRYERGSYGKDVRGILRVHEFRKVEMVVFCLPEDSDTIHEQL 289
Query: 373 IRIEEDLYSSLGLHFKLL 390
IEE++++ L + ++++
Sbjct: 290 REIEEEIWTDLDIPYQVI 307
>gi|182437423|ref|YP_001825142.1| seryl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778079|ref|ZP_08237344.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
gi|238688982|sp|B1VP80.1|SYS_STRGG RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|178465939|dbj|BAG20459.1| putative seryl-tRNA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658412|gb|EGE43258.1| Seryl-tRNA synthetase [Streptomyces griseus XylebKG-1]
Length = 425
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVGLVDALLSADELRRSSGVRFDELRAEQRSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER +L+++ + LK + + + + ++ + N+ H DVPVGGE+ ++
Sbjct: 61 KATPEERTELLKKAEQLKADVKAADAAQDEAAADAKRLLLQLGNIVHEDVPVGGEEDFVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+AL D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETHGTIRDFGAEGFEPKDHLELGEALGAIDMERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ + GF P+ TP +VR +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATEAGFVPMLTPALVRPRAMEGTGFLGQAAEN-VYHLEKDDYYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + P ++++ H
Sbjct: 240 MDEIIDADKLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVDPADAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ ++L L F+++
Sbjct: 300 RLLDWEKQWLTALELPFQVI 319
>gi|375291844|ref|YP_005126384.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 241]
gi|375294038|ref|YP_005128578.1| seryl-tRNA synthetase [Corynebacterium diphtheriae INCA 402]
gi|376243810|ref|YP_005134662.1| seryl-tRNA synthetase [Corynebacterium diphtheriae CDCE 8392]
gi|376246680|ref|YP_005136919.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC01]
gi|376249513|ref|YP_005141457.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC04]
gi|376252284|ref|YP_005139165.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC03]
gi|376258059|ref|YP_005145950.1| seryl-tRNA synthetase [Corynebacterium diphtheriae VA01]
gi|376285748|ref|YP_005158958.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 31A]
gi|376288738|ref|YP_005161304.1| seryl-tRNA synthetase [Corynebacterium diphtheriae BH8]
gi|419861719|ref|ZP_14384344.1| seryl-tRNA synthetase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
gi|371579263|gb|AEX42931.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 31A]
gi|371581515|gb|AEX45182.1| seryl-tRNA synthetase [Corynebacterium diphtheriae 241]
gi|371583710|gb|AEX47376.1| seryl-tRNA synthetase [Corynebacterium diphtheriae INCA 402]
gi|371586072|gb|AEX49737.1| seryl-tRNA synthetase [Corynebacterium diphtheriae BH8]
gi|372107052|gb|AEX73114.1| seryl-tRNA synthetase [Corynebacterium diphtheriae CDCE 8392]
gi|372109310|gb|AEX75371.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC01]
gi|372113788|gb|AEX79847.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC03]
gi|372116081|gb|AEX82139.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC04]
gi|372120576|gb|AEX84310.1| seryl-tRNA synthetase [Corynebacterium diphtheriae VA01]
gi|387981823|gb|EIK55362.1| seryl-tRNA synthetase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
Length = 419
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + A ++ +LE EK K D LR E A K+
Sbjct: 2 IDLKFLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + ++ + N+ D P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVV-TDAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR V+ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEVMSGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHQD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+ L
Sbjct: 238 EIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E ++ +++ + ++++
Sbjct: 298 LNMEREMLAAVEVPYRII 315
>gi|269217577|ref|ZP_06161431.1| serine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212512|gb|EEZ78852.1| serine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 420
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 178/318 (55%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +++R+N +AV + R R N A+++ +L E + + + R + ++ + G
Sbjct: 2 IDIRFVRENPDAVRESQRRRGNDEASVDALLAADEARRSALQAFETARASQKELSRSI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER ++ E K L E + LE E Q I N+ VP GGE+ +
Sbjct: 61 KASPEERPAVLAEAKALAERVKELEAAANGAEQEYLQANAAIQNIVLEGVPAGGEEDYEV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P VF+F KDH + +ALD D +VSGS+FYYLK LE+ L+ +
Sbjct: 121 LKHVGEPRVFDFEPKDHLDVAEALDAIDMARGTKVSGSRFYYLKGVGARLELALLTMAVD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT +TTP +V ++ GF GA++ ++Y + DQ L+GT+E+ + G H D
Sbjct: 181 QAEAAGFTMMTTPTLVNPDIMAGTGFL--GAHSDEIYYLPADDQYLVGTSEVALAGYHKD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S C+R EAG+ G TRG+ RVHQF+K+EMF +C+ EE++ H
Sbjct: 239 EIVDLSNGPLRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYCRLEEAEEEHRRF 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + L ++++
Sbjct: 299 LAWEEEMLAKVELPYRVI 316
>gi|422489715|ref|ZP_16566042.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
gi|328757719|gb|EGF71335.1| seryl-tRNA synthetase [Propionibacterium acnes HL020PA1]
Length = 424
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E D LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHDNLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|225022356|ref|ZP_03711548.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii
ATCC 33806]
gi|305680222|ref|ZP_07403030.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
gi|224944869|gb|EEG26078.1| hypothetical protein CORMATOL_02395 [Corynebacterium matruchotii
ATCC 33806]
gi|305659753|gb|EFM49252.1| serine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
Length = 419
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R +N L + ++ E K D L+ E+NA K+ G
Sbjct: 2 IDLKFLRENPDLVRDSQRTRGANPILVDQLIAADESRRAAIKAADELKAEQNAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+ LK V ED K + + Q + P GGED ++
Sbjct: 61 QAAPEDRPALLAGANELK-AKVKAAEDARKEAEAAVTDLQMRIDNIVEGAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG +L + D D A+VSG++FYYL + L++ ++
Sbjct: 120 LEHVGEPRSFDFTPKDHLDLGISLGLIDMDRGAKVSGARFYYLTGDGAFLQLAMLTLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF + P +VR V+ GF A ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARTAGFKLMIPPVLVRPEVMSGTGFLGEHAE-EIYYLERDDLYLVGTSEVALAGYHQDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+EL+
Sbjct: 239 IIDLSNGPRKYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCKPEEAAAQHQELL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E D+ S++ + ++++
Sbjct: 299 GMERDMLSAIEVPYRVI 315
>gi|423351510|ref|ZP_17329161.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
gi|404386477|gb|EJZ81635.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
Length = 435
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 180/322 (55%), Gaps = 4/322 (1%)
Query: 70 QWKAAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVA 128
+W ID K++RDN + V + R + +L + +L E+ + D LR R
Sbjct: 13 KWDNVIDLKFLRDNPQTVKDSQVARGEDPSLVDELLAADERRREAIQRADGLRS-RQKQL 71
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K G+ P ER+ L+ E LK+ L + + + + N+ P GGE
Sbjct: 72 GKAIGQASPEEREALLAEANELKDSLKAAGAAETEAEEAVNAAQHRLSNVVE-GAPAGGE 130
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ ++ + G P+ FNF KDH LG++L I D +VSG++FYYLK + +L++G++
Sbjct: 131 EDFVVLEHHGEPTAFNFEPKDHLDLGESLGIIDVKRGTKVSGARFYYLKGDGALLQLGML 190
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + GFT + P +VR V+ GF ++ ++Y +E D L+GT+E+ + G
Sbjct: 191 TLAARKATENGFTVMIPPVLVRPEVMSGTGFLGEHSD-EIYYLERDDLYLVGTSEVALAG 249
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D I+ S P++YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+
Sbjct: 250 YHADEIIDLSNGPVRYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCRPEEAAEQ 309
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H++L+ +E ++ +++ + ++++
Sbjct: 310 HQKLLDLEREMLAAVEVPYRVI 331
>gi|422479060|ref|ZP_16555471.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
gi|313826917|gb|EFS64631.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA1]
Length = 424
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ EED ++L + F++L
Sbjct: 300 KLLSFEEDFITALQIPFQVL 319
>gi|395237793|ref|ZP_10415813.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
gi|394486892|emb|CCI83901.1| seryl-tRNA synthetase [Turicella otitidis ATCC 51513]
Length = 469
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 180/322 (55%), Gaps = 4/322 (1%)
Query: 70 QWKAAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVA 128
+W ID K++RDN + V + R + +L + +L E+ + D LR R
Sbjct: 47 KWDNVIDLKFLRDNPQTVKDSQVARGEDPSLVDELLAADERRREAIQRADGLRS-RQKQL 105
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K G+ P ER+ L+ E LK+ L + + + + N+ P GGE
Sbjct: 106 GKAIGQASPEEREALLAEANELKDSLKAAGAAETEAEEAVNAAQHRLSNVVE-GAPAGGE 164
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ ++ + G P+ FNF KDH LG++L I D +VSG++FYYLK + +L++G++
Sbjct: 165 EDFVVLEHHGEPTAFNFEPKDHLDLGESLGIIDVKRGTKVSGARFYYLKGDGALLQLGML 224
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + GFT + P +VR V+ GF ++ ++Y +E D L+GT+E+ + G
Sbjct: 225 TLAARKATENGFTVMIPPVLVRPEVMSGTGFLGEHSD-EIYYLERDDLYLVGTSEVALAG 283
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D I+ S P++YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+
Sbjct: 284 YHADEIIDLSNGPVRYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCRPEEAAEQ 343
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H++L+ +E ++ +++ + ++++
Sbjct: 344 HQKLLDLEREMLAAVEVPYRVI 365
>gi|226363330|ref|YP_002781112.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
gi|254783043|sp|C1B914.1|SYS_RHOOB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226241819|dbj|BAH52167.1| seryl-tRNA synthetase [Rhodococcus opacus B4]
Length = 418
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 177/318 (55%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + L + I N+ P GGED I
Sbjct: 61 QASPEERPALLEGSKELAAKVKQAEAGQHEAQAALDAAHRAISNIVQDGAPAGGEDDFIT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH +LG++L + D + A+VSG++FY+L ML++G++
Sbjct: 121 LETVGEIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR ++ GF GA++ ++Y + D L+GT+E+P+ G H
Sbjct: 181 KAMANGFQMMIPPVLVRPEIMAGTGFL--GAHSDEIYHLADDDLYLVGTSEVPLAGYHSG 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L
Sbjct: 239 EILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E D+ +++ + ++++
Sbjct: 299 LAWERDMLAAIDVPYRVI 316
>gi|376291406|ref|YP_005163653.1| seryl-tRNA synthetase [Corynebacterium diphtheriae C7 (beta)]
gi|372104802|gb|AEX68399.1| seryl-tRNA synthetase [Corynebacterium diphtheriae C7 (beta)]
Length = 419
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + A ++ +LE EK K D LR E A K+
Sbjct: 2 IDLKFLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + ++ + N+ D P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVV-TDAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR V+ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEVMSGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHQD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+ L
Sbjct: 238 EIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E + +++ + ++++
Sbjct: 298 LNMERGMLAAVEVPYRII 315
>gi|38234776|ref|NP_940543.1| seryl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
gi|81829836|sp|Q6NEN2.1|SYS_CORDI RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|38201040|emb|CAE50764.1| seryl-tRNA synthetase [Corynebacterium diphtheriae]
Length = 419
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + A ++ +LE EK K D LR E A K+
Sbjct: 2 IDLKLLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + ++ + N+ D P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVV-TDAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR V+ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEVMSGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHQD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+ L
Sbjct: 238 EIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E ++ +++ + ++++
Sbjct: 298 LNMEREMLAAVEVPYRII 315
>gi|376294205|ref|YP_005165879.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC02]
gi|372111528|gb|AEX77588.1| seryl-tRNA synthetase [Corynebacterium diphtheriae HC02]
Length = 419
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + A ++ +LE EK K D LR E A K+
Sbjct: 2 IDLKLLRENPDVVRESQRIRGEDPALVDQLLEADEKRREAIKSADDLRAEHKAFGKKIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + ++ + N+ D P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKSRVKAAEEAEAEALAKVNEIQMLFGNVV-TDAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGTPRTFDFEPKDHLDLGESLGLIDVKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR V+ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEVMSGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHQD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PEE+ + H+ L
Sbjct: 238 EIIDLSDGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCKPEEAVAQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E ++ +++ + ++++
Sbjct: 298 LNMEREMLAAVEVPYRII 315
>gi|392413758|ref|YP_006450365.1| seryl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390626894|gb|AFM28101.1| seryl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 425
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 175/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +IR N E + IR + +++ +L + E++ + EV+ LR +RN V+ + K
Sbjct: 2 LDIAFIRSNPEIIKEGIRKKRMPMDVDELLSVDEELRKTRAEVESLRADRNRVSKDIP-K 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
L ER + +E KN+K+ + E L +L + + +PN VP G +D ++
Sbjct: 61 LMGEERDQAVELVKNVKDRMAQAEPRLKELEERFDRLMLMVPNPPLDMVPEGDSDDDNVE 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G P+ F FP KDH +L + L I D A ++SG++ Y+LKNE +LE L + L
Sbjct: 121 VRRFGEPTQFAFPPKDHLELAEGLGILDMPRAVKISGARMYFLKNEGALLEFALFRFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GF P+ P+IVR + GF P G + IE L+GT+E+P+ HMD
Sbjct: 181 LLVSKGFQPMIVPQIVRRDAMIGTGFFPLGEEDTFF-IEKDQLYLVGTSEVPLVSYHMDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC--QPEESDSYHEE 371
IL+E LP Y +S CFR EAG+ G TRG YR+HQF+K+E C PE S H
Sbjct: 240 ILNEKELPKHYCGYSSCFRREAGSYGRDTRGFYRLHQFNKVEQIAICVNDPEVSMKEHYL 299
Query: 372 LIRIEEDLYSSLGLHFKLLL 391
L+ E+L SLGL ++ L
Sbjct: 300 LLGNSEELMRSLGLPHRVAL 319
>gi|384103222|ref|ZP_10004199.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|419965243|ref|ZP_14481191.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|432340612|ref|ZP_19590038.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
gi|383839063|gb|EID78420.1| seryl-tRNA synthetase [Rhodococcus imtechensis RKJ300]
gi|414569353|gb|EKT80098.1| seryl-tRNA ligase [Rhodococcus opacus M213]
gi|430774361|gb|ELB89963.1| seryl-tRNA ligase [Rhodococcus wratislaviensis IFP 2016]
Length = 418
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 176/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + + L + I N+ P GGED +
Sbjct: 61 QASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH +LG++L + D + A+VSG++FY+L ML++G++
Sbjct: 121 LETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF A+ ++Y + D L+GT+E+P+ G H
Sbjct: 181 KAMANGFQMMIPPVLVRPEIMAGTGFLGAHAD-EIYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L+
Sbjct: 240 ILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ +++ + ++++
Sbjct: 300 GWERDMLAAIDVPYRVI 316
>gi|407279378|ref|ZP_11107848.1| seryl-tRNA ligase [Rhodococcus sp. P14]
Length = 420
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 177/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V A+ R R + L + +LE D +R E+ A+ K+ G
Sbjct: 2 IDLKFLRENPDVVRASQRTRGEDPGLVDALLEADAARRAAVLAGDNIRAEQKALGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + LE + + L + I N+ P GGED +
Sbjct: 61 QASPEERPALLEGAKELAANVKKLEAEQHAAEEALGRAHMAISNIVQEGAPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH LG++L + D + A+VSG++FY+L +L++G++
Sbjct: 121 LETVGELPTFDFEPKDHLALGESLGLIDMERGAKVSGARFYFLTGYGALLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF + P +VR +++ GF A+ ++Y + D L+GT+E+P+ G H
Sbjct: 181 RAVANGFQMMIPPVLVRPEIMQGTGFLGAHAD-EIYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE++ + H+ L+
Sbjct: 240 ILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEDAVAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ +++ + ++++
Sbjct: 300 AWERDMLAAIEVPYRVI 316
>gi|365966081|ref|YP_004947646.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422449791|ref|ZP_16526512.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|315110490|gb|EFT82466.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|365742762|gb|AEW82456.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 424
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQISFQVL 319
>gi|357019669|ref|ZP_09081917.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
gi|356480574|gb|EHI13694.1| seryl-tRNA synthetase [Mycobacterium thermoresistibile ATCC 19527]
Length = 417
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + L + +L E D LR E+ A A++ G
Sbjct: 2 IDLKLLRENPDVVRASQRARGEDPALVDALLAADEARRAAVSAADNLRAEQKA-ASRSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+E K L E + E + L + I N+ VP GGED ++
Sbjct: 61 KASPDERPALLERAKELAEQVKAAEARQAEAEQALTEAHMAISNIVIDGVPPGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P+ + P +DH +LG++L + D + A+VSGS+FY+L +L++GL+ +
Sbjct: 121 LDTVGEPTPIDNP-RDHLELGESLGLIDVERGAKVSGSRFYFLTGAGALLQLGLLQLAMR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFTP+ P +VR ++ GF GA+ +VY IE D L+GT+E+P+ G H D
Sbjct: 180 VATQNGFTPMIPPVLVRPQIMSGTGFL--GAHAAEVYRIESDDLYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ H+ L
Sbjct: 238 EILDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCRPEEAEAEHDRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ ++ + + + + ++++
Sbjct: 298 LAWQKKMLAHIEVPYRVI 315
>gi|111021024|ref|YP_703996.1| seryl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|397734107|ref|ZP_10500817.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
gi|122955575|sp|Q0S9E8.1|SYS_RHOSR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110820554|gb|ABG95838.1| serine--tRNA ligase [Rhodococcus jostii RHA1]
gi|396929775|gb|EJI96974.1| seryl-tRNA synthetase [Rhodococcus sp. JVH1]
Length = 418
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 177/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + + L + I N+ P GGED +
Sbjct: 61 QASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG+ F+F KDH +LG++L + D + A+VSG++FY+L ML++G++
Sbjct: 121 LETVGDIPAFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF A+ +VY + D L+GT+E+P+ G H
Sbjct: 181 KAMANGFQMMIPPVLVRPEIMAGTGFLGAHAD-EVYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L+
Sbjct: 240 ILDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E ++ +++ + ++++
Sbjct: 300 AWEREMLAAIDVPYRVI 316
>gi|455648224|gb|EMF27104.1| seryl-tRNA ligase [Streptomyces gancidicus BKS 13-15]
Length = 425
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+ G
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSL-GKLIG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ++ +L+++ + LK + + + E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 RATGDDKAELLKKAEQLKADVKAADAERDAADTETQELLLKLSNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G+ F F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGSIRDFAAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LP++YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S H+
Sbjct: 240 MDEILEADKLPMRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQEEHK 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|422499745|ref|ZP_16576003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
gi|313829289|gb|EFS67003.1| seryl-tRNA synthetase [Propionibacterium acnes HL063PA2]
Length = 424
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQISFQVL 319
>gi|392418768|ref|YP_006455373.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
gi|390618544|gb|AFM19694.1| seryl-tRNA synthetase [Mycobacterium chubuense NBB4]
Length = 419
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 173/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ + R + L L + D LR E+ A A+K G
Sbjct: 2 IDLKVLRENPDAVRASQQARGEDPGLVDALAQADAARRAAISNADNLRAEQKA-ASKRVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + E + I N+ VP GGED ++
Sbjct: 61 KASPDERPALLASAKELAERVKAAEAAQDEAEKAYTTAHMAISNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P + P KDH +LG++L + D A+VSGS+FY+L +L++GL +
Sbjct: 121 LDTVGEPPAIDDP-KDHLELGESLGLIDMARGAKVSGSRFYFLTGYGALLQLGLFQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 TATENGFTLMVPPVLVRPEIMAGTGFLGAHAD-EVYRVEADDLYLVGTSEVPLAGFHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ HE L+
Sbjct: 239 IVDLSAGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEHERLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ + + + + ++++
Sbjct: 299 GWQRQMLAHIEVPYRVI 315
>gi|422431716|ref|ZP_16508587.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
gi|422509569|ref|ZP_16585725.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|313817098|gb|EFS54812.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|315100032|gb|EFT72008.1| seryl-tRNA synthetase [Propionibacterium acnes HL059PA2]
Length = 424
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQML 319
>gi|328769987|gb|EGF80030.1| hypothetical protein BATDEDRAFT_12060 [Batrachochytrium
dendrobatidis JAM81]
Length = 425
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 163/287 (56%), Gaps = 26/287 (9%)
Query: 125 NAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
NA A+ ++ + + + +LI+ GKN+K+ + EE L KL ++L EA+ +PN HP VP
Sbjct: 8 NASADAIRACV--ATKTRLIQAGKNIKQQVQATEETLSKLHNDLFNEAKHLPNDVHPSVP 65
Query: 185 VGGEDCSIIRKTVGNPSVF--------NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
VG E +++ T+G+P P+K H L + D+ D D A +VSGS+FYYL
Sbjct: 66 VGDESKAVLVDTIGSPRTLESNLLMGSQSPLKTHLTLAELHDMVDIDRAGKVSGSRFYYL 125
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY----SIE 292
+N MLEM L+ + + I+RGFTP+ P+++R V+E CGF PR + Q Y +
Sbjct: 126 RNAGAMLEMALVRYAMDICIQRGFTPVLVPDLIRHEVLEACGFSPRSDDPQTYYVSTCVP 185
Query: 293 GAD---------QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
G D CL TAE P+ G + +L LP+ + FR E G +G+ R
Sbjct: 186 GKDITNTDNPMTLCLSATAEFPLAGKYAGEVLDH--LPINMSGMGRAFRAE-GLSGSTNR 242
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVHQF+K+E+F +P ES + I+I+++++ L + F++L
Sbjct: 243 GLYRVHQFTKVELFTLARPTESMNVFHHFIQIQKEIFQGLEICFRIL 289
>gi|27777570|gb|AAM77028.1| seryl-tRNA synthetase [Streptomyces viridifaciens]
Length = 383
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKQL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L++ + LK + + + E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KAAAEEKAELLKRAEQLKADVKAADAERDAADAETQELLLRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTIRDFAAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSPAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|269124398|ref|YP_003297768.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183]
gi|268309356|gb|ACY95730.1| seryl-tRNA synthetase [Thermomonospora curvata DSM 43183]
Length = 418
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 185/318 (58%), Gaps = 7/318 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ E + A+ R R + A ++ +++L E+ + ++LR E+ + +
Sbjct: 2 IDLRALREDPERLRASQRARGEDEAVVDRLIDLDERRRAALSQFEKLRAEQKSFGKSVS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + ERQ L+E K L + E + +L +EL + + +PN+ P GGE ++
Sbjct: 61 KAKGEERQALLERAKELARQVKEAEAEADRLQEELNEVLRGVPNIIEEGAPPGGEQDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F +DH +LG+ L D + A+VSG++FYYL L++ L+N +
Sbjct: 121 LEHVGEPPTFDFEPRDHLELGELLGAIDTERGAKVSGARFYYLTGVGARLQLALLNLAME 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF P+ P +V+ +E GF GA+ ++VY +E D L+GT+E+P+ HM+
Sbjct: 181 QAIEAGFFPMYPPVLVKPEAMEGTGFL--GAHASEVYRLEADDLYLVGTSEVPLAAYHMN 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + LP +Y A+S CFR EAG+ G TRG+ RVHQF K+EMF +C E+S + H L
Sbjct: 239 EIIDD--LPRRYVAWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSYCTLEDSHAEHLRL 296
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+ + + + L ++++
Sbjct: 297 LEWEKQMLAKVELPYRVI 314
>gi|432331118|ref|YP_007249261.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
gi|432137827|gb|AGB02754.1| seryl-tRNA synthetase [Methanoregula formicicum SMSP]
Length = 425
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 183/322 (56%), Gaps = 8/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEK---MLNVQKEVDRLREERNAVANKM 131
+D K++R + + V A++ RN + V EL K ++ E D+LR+ RN +A +
Sbjct: 2 LDIKFVRASPDVVKADLTKRNDLEKIAWVDELLAKDARSRELKVETDQLRQRRNTIARDI 61
Query: 132 KGKLEPSERQK-LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + K L+EE +L + + + + ++ +++ +PN+ H VPVG +D
Sbjct: 62 NAAKKAGQDAKPLMEEAASLPKKIKDHDTEQEEIRTRMREIQMRLPNILHESVPVGKDDS 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K VG P F+F VK+H QL DF+ AA+ SG+ FY+LK V+L+M L
Sbjct: 122 ENVEVKRVGTPRTFSFEVKNHGQLATEKGWADFERAAKTSGAGFYFLKGNLVLLDMALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVGG 308
+ + + K+G+TP+ P ++ + E G G +V Y I+G D LI T+E P+G
Sbjct: 182 YAIDLLEKKGYTPVIPPYMINRTSYE--GVTDLGDFEKVMYKIDGDDAYLIATSEHPIGA 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D I E LPL+ A S CFR E GA G T+GL+RVHQF+K+E FVFC+PE+S +
Sbjct: 240 MYQDEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFTKVEQFVFCKPEDSWTI 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HEEL+ E+++ L L + ++
Sbjct: 300 HEELLANAEEIFQGLDLPYHVV 321
>gi|383637416|ref|ZP_09950822.1| seryl-tRNA synthetase [Streptomyces chartreusis NRRL 12338]
Length = 425
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 179/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + D E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KASGDEKAELLKKAGQLAADVKAADADRDAAATETQELLLRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F +DH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTIRDFTAEGFEPRDHLELGQILGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY + D L+GT+E+P+ H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLAADDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEILDAEKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L ++++
Sbjct: 300 RLLEWEKQWLTSLELPYRVI 319
>gi|50843654|ref|YP_056881.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289425915|ref|ZP_06427667.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289427861|ref|ZP_06429565.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|295131740|ref|YP_003582403.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|335055122|ref|ZP_08547912.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|354605760|ref|ZP_09023735.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365963841|ref|YP_004945407.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365975020|ref|YP_004956579.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|386025144|ref|YP_005943450.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|387504578|ref|YP_005945807.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|417930761|ref|ZP_12574135.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|422383805|ref|ZP_16463946.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|422386636|ref|ZP_16466753.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|422391650|ref|ZP_16471730.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|422423817|ref|ZP_16500768.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|422426585|ref|ZP_16503505.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|422430412|ref|ZP_16507293.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|422434459|ref|ZP_16511317.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|422442985|ref|ZP_16519786.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|422445237|ref|ZP_16521990.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|422448146|ref|ZP_16524878.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|422452630|ref|ZP_16529327.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|422455646|ref|ZP_16532316.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|422461101|ref|ZP_16537735.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|422474381|ref|ZP_16550848.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|422476074|ref|ZP_16552513.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|422482190|ref|ZP_16558589.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|422484570|ref|ZP_16560947.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|422486464|ref|ZP_16562810.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|422496655|ref|ZP_16572937.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|422501821|ref|ZP_16578070.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|422505308|ref|ZP_16581539.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|422507557|ref|ZP_16583739.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|422512288|ref|ZP_16588421.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|422519258|ref|ZP_16595320.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|422520136|ref|ZP_16596178.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|422525214|ref|ZP_16601216.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|422527664|ref|ZP_16603651.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|422533363|ref|ZP_16609301.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|422536514|ref|ZP_16612421.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|422538977|ref|ZP_16614851.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|422541857|ref|ZP_16617713.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|422546775|ref|ZP_16622599.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|422548886|ref|ZP_16624694.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|422552806|ref|ZP_16628594.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|422556156|ref|ZP_16631915.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|422556644|ref|ZP_16632396.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|422558815|ref|ZP_16634548.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|422561534|ref|ZP_16637219.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|422567908|ref|ZP_16643533.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|422569184|ref|ZP_16644799.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|422577321|ref|ZP_16652855.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|81826360|sp|Q6A5P0.1|SYS_PROAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50841256|gb|AAT83923.1| seryl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|289153691|gb|EFD02400.1| serine--tRNA ligase [Propionibacterium acnes SK187]
gi|289158744|gb|EFD06944.1| serine--tRNA ligase [Propionibacterium acnes J165]
gi|291377175|gb|ADE01030.1| serine--tRNA ligase [Propionibacterium acnes SK137]
gi|313765178|gb|EFS36542.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|313771554|gb|EFS37520.1| seryl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|313808611|gb|EFS47071.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|313811953|gb|EFS49667.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|313819045|gb|EFS56759.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|313821678|gb|EFS59392.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|313823814|gb|EFS61528.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|313832385|gb|EFS70099.1| seryl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|313834182|gb|EFS71896.1| seryl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|314916818|gb|EFS80649.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|314918995|gb|EFS82826.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|314921174|gb|EFS85005.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|314926153|gb|EFS89984.1| seryl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|314932479|gb|EFS96310.1| seryl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|314956294|gb|EFT00666.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|314958685|gb|EFT02787.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|314960992|gb|EFT05093.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|314968817|gb|EFT12915.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|314975052|gb|EFT19147.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|314977463|gb|EFT21558.1| seryl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|314979051|gb|EFT23145.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|314985840|gb|EFT29932.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|314985971|gb|EFT30063.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|314989277|gb|EFT33368.1| seryl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|315081396|gb|EFT53372.1| seryl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|315084964|gb|EFT56940.1| seryl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|315087495|gb|EFT59471.1| seryl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|315089597|gb|EFT61573.1| seryl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|315096907|gb|EFT68883.1| seryl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|315102807|gb|EFT74783.1| seryl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|315107363|gb|EFT79339.1| seryl-tRNA synthetase [Propionibacterium acnes HL030PA1]
gi|327332982|gb|EGE74714.1| serine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|327333974|gb|EGE75689.1| serine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|327448690|gb|EGE95344.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|327449117|gb|EGE95771.1| seryl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|327450347|gb|EGE97001.1| seryl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|327455505|gb|EGF02160.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|327456161|gb|EGF02816.1| seryl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|328756832|gb|EGF70448.1| seryl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|328759113|gb|EGF72729.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|328762221|gb|EGF75717.1| serine--tRNA ligase [Propionibacterium acnes HL099PA1]
gi|332676603|gb|AEE73419.1| serine-tRNA ligase [Propionibacterium acnes 266]
gi|333762729|gb|EGL40215.1| serine--tRNA ligase [Propionibacterium sp. 434-HC2]
gi|335278623|gb|AEH30528.1| seryl-tRNA synthetase [Propionibacterium acnes 6609]
gi|340769666|gb|EGR92188.1| serine--tRNA ligase [Propionibacterium acnes SK182]
gi|353558416|gb|EHC27780.1| seryl-tRNA synthetase [Propionibacterium sp. 5_U_42AFAA]
gi|365740522|gb|AEW84724.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365745019|gb|AEW80216.1| seryl-tRNA synthetase [Propionibacterium acnes TypeIA2 P.acn33]
gi|456739291|gb|EMF63858.1| seryl-tRNA ligase [Propionibacterium acnes FZ1/2/0]
Length = 424
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|397482157|ref|XP_003812299.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 1 [Pan
paniscus]
Length = 518
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 181/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|426388626|ref|XP_004060734.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 1 [Gorilla
gorilla gorilla]
Length = 518
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 181/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVQALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|220932938|ref|YP_002509846.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
gi|254783031|sp|B8CZZ9.1|SYS_HALOH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219994248|gb|ACL70851.1| seryl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 422
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 188/319 (58%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V+ ++ R + A L+ EL EK + +EV++L+ +RN V++K+ G+
Sbjct: 2 LDMKFIRENLETVADMLKRRGTEAPLDEFKELDEKRREIIQEVEQLKHKRNVVSSKI-GE 60
Query: 135 LEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
L+ + + +I E K + + +E+L + + LQQ IPNM H VPVG ED +
Sbjct: 61 LKRAGEDASDIIAEMKEVSATIKKYDEELRGIEERLQQVVLSIPNMPHDSVPVGEDEDDN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G P F+F K H+ LG+ALDI DF+ ++VSG++F +LK LE LI++
Sbjct: 121 VEVRRWGEPRKFDFEFKPHWDLGEALDILDFERGSKVSGARFTFLKGAGARLERSLISFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + G+T + P +V S G P+ A ++ +EG D LI TAE+PV ++
Sbjct: 181 IDHHTQNGYTEIFPPFMVNSDSCIGTGQLPKFAG-DMFKVEGTDYYLIPTAEVPVTNLYR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL+ LP+ + A+S CFR EAGA G TRG+ R HQF+K+E+ F P++S E+
Sbjct: 240 DEILNAEDLPVYHVAYSACFRAEAGAHGRDTRGIIRQHQFNKVELVKFVHPDKSFEELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L R E++ L L ++++
Sbjct: 300 LTRNAEEILQMLELPYRVV 318
>gi|407936588|ref|YP_006852230.1| seryl-tRNA ligase [Propionibacterium acnes C1]
gi|407905169|gb|AFU41999.1| seryl-tRNA ligase [Propionibacterium acnes C1]
Length = 424
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQAARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|452957714|gb|EME63077.1| seryl-tRNA ligase [Rhodococcus ruber BKS 20-38]
Length = 420
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 179/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R R + L + +LE D +R E+ A+ K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRTRGEDPGLVDALLEADAARRAAVLAGDNIRAEQKALGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + LE + + L++ I N+ P GGED +
Sbjct: 61 QASPEERPALLEGAKELAANVKKLEAEQHAAEEALERAHMAISNIVQEGAPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH LG++L + D + A+VSG++FY+L +L++G++
Sbjct: 121 LETVGELPTFDFEPKDHLTLGESLGLIDMERGAKVSGARFYFLTGYGALLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF + P +VR +++ GF A+ ++Y + D L+GT+E+P+ G H
Sbjct: 181 RAVANGFQMMIPPVLVRPEIMQGTGFLGAHAD-EIYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE++ + H+ L+
Sbjct: 240 ILDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEDATAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ +++ + ++++
Sbjct: 300 AWERDMLAAIEVPYRVI 316
>gi|406996998|gb|EKE15191.1| hypothetical protein ACD_12C00116G0011, partial [uncultured
bacterium]
Length = 438
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 183/320 (57%), Gaps = 11/320 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+ +IR+NKE V +N+N +++ +L+L ++ + +++ LREERN ++ GK
Sbjct: 20 LSLDYIRNNKEKVIEAAKNKNRKVDIDKILKLDDERRELIQKIQVLREERNKTSH---GK 76
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P E K I GK +KE L LEE L ++ +L Q +PN+ P+VPVG ++ S +
Sbjct: 77 --PDE--KTILRGKEIKEELKKLEETLSVISIQLDQLVSFVPNVPLPEVPVGKDESSNVE 132
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G F+F K H LG++LD+FD + ++VSG + Y+LKN+A L+ ++ +
Sbjct: 133 VKKWGKIPKFDFEPKSHLDLGRSLDLFDLERGSKVSGFRGYFLKNQAAQLQFAILFYVFQ 192
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+++K+G+TP+ P IV+ + G P G +VY + D L GTAE+P+
Sbjct: 193 KLVKKGYTPIIAPSIVKGFTLFGSGQFPWGEQ-EVYKLNDEDAYLAGTAEVPITSYFSGE 251
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEE 371
IL ES LP K+ AFS CFR EAG+ G +GLYRVH+F K+E + + EES H E
Sbjct: 252 ILKESELPKKFVAFSPCFRREAGSYGKDVKGLYRVHEFWKVEQVIIAKNNVEESKGLHAE 311
Query: 372 LIRIEEDLYSSLGLHFKLLL 391
L + E++ + ++ LL
Sbjct: 312 LQKNTEEIIEDFKIPYRRLL 331
>gi|8923421|ref|NP_060297.1| serine--tRNA ligase, mitochondrial isoform b precursor [Homo
sapiens]
gi|23822219|sp|Q9NP81.1|SYSM_HUMAN RecName: Full=Serine--tRNA ligase, mitochondrial; AltName:
Full=SerRSmt; AltName: Full=Seryl-tRNA synthetase;
Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
synthetase; Flags: Precursor
gi|7020557|dbj|BAA91176.1| unnamed protein product [Homo sapiens]
gi|9188535|dbj|BAA99557.1| mitochondrial seryl-tRNA synthetase [Homo sapiens]
gi|27781316|gb|AAH42912.1| Seryl-tRNA synthetase 2, mitochondrial [Homo sapiens]
gi|261859068|dbj|BAI46056.1| F-box protein 17 [synthetic construct]
Length = 518
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 181/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|189190930|ref|XP_001931804.1| seryl-tRNA synthetase synthetase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973410|gb|EDU40909.1| seryl-tRNA synthetase synthetase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 509
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 200/390 (51%), Gaps = 41/390 (10%)
Query: 39 PPFRLLARAFSAPALQTIDTTDNKGGVAVKPQW--KAAIDFKWIRDNKEAVSANIRNRNS 96
P FR+ A+ P L+ T ++P + K ID K IR N N +RN
Sbjct: 12 PSFRIQAQC---PRLRLCQPTFLARRTYLRPAFAPKPTIDIKHIRQNPGLYEQNCVDRNY 68
Query: 97 NANLE---LVLELYEKMLNVQKEVDRLREERNAVAN---KMKGKLEPSE------RQKLI 144
A+ + +LEL+E+ L +Q+ LRE N + K +++ ++ R+ +I
Sbjct: 69 AAHSKSSWRILELHEQWLQLQQSSRSLRERNNRIRAHLAKTASRVKDADGKPVALREGMI 128
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED--CSIIRKTVGNPSV 202
E K +K L +E +L +E++ AQ +PN++ PVG E I +G+
Sbjct: 129 GEAKAIKAELSAVEAQETQLQEEIESLAQDLPNLSSTHTPVGTEPDVLGYINAHLGSEPS 188
Query: 203 FNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
+ K H +G+ L I DF +A+ SG +Y+L + MLE L+ + L K+G+
Sbjct: 189 QSKSQKSHVDIGQELGILDFTGSAQTSGWGWYFLIGDGAMLEQALVQYALRVATKKGWKA 248
Query: 263 LTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGADQ-------CLIGTAEIPVGGIHMDS 313
+ P +V S + CGFQPR N QVY+IE A++ L GTAEIP+ G+ ++
Sbjct: 249 VAPPSLVYSHIASACGFQPRDQNGEQQVYAIEQAEKDKAKPQLALAGTAEIPLAGMKVNQ 308
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH---- 369
ES LPLK S C+R EAGA G T+GLYRVH+F+K+EMF + P+ + H
Sbjct: 309 TFEESELPLKTVGVSRCYRAEAGARGADTKGLYRVHEFTKVEMFAWTSPDHAGEDHFTAQ 368
Query: 370 ---------EELIRIEEDLYSSLGLHFKLL 390
EE++ I++++ +LGLH ++L
Sbjct: 369 TTQSSEVIFEEMLSIQKEILEALGLHCRIL 398
>gi|408388054|gb|EKJ67749.1| hypothetical protein FPSE_12120 [Fusarium pseudograminearum CS3096]
Length = 502
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 187/351 (53%), Gaps = 34/351 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR + E RN N +LEL+ + ++Q++ LRE N +
Sbjct: 39 KPIVDIKHIRQHAELYQQTCVERNYRKQAQNPAKILELHARWQDLQRQGRALRERSNLLR 98
Query: 129 NKMKGKLEPS-----------ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++ S R+++ +E + LK+ L T+E+ + ++++ A +PN
Sbjct: 99 RQLANPATSSGDEDLKEVRQLTREQIQDEARQLKQDLSTIEKGESQSVTQMEELALELPN 158
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD-----HFQLGKALDIFDFDAAAEVSGSK 232
+THPD P GGE + + +P +F +D H +G L +FDF AA SG
Sbjct: 159 LTHPDTPKGGE--FEVMSYINDPPIFKESPEDKIWRSHVHIGSELGLFDFAGAATASGWG 216
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR--GANTQVYS 290
+YYL EA LE LI + LS + G+T ++ P +V S + CGFQPR QVY+
Sbjct: 217 WYYLLGEAAQLEQALIQFALSTATRHGWTQVSPPSMVYSHIGAACGFQPRDVSGEQQVYT 276
Query: 291 I----EGADQ-----CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
I E A++ CL GT+EI + G+ ++ + LPLK A S C+R EAGA G
Sbjct: 277 IAQSAEDAERGVPEMCLTGTSEIALAGMKANTTIDPEDLPLKRVAVSRCYRAEAGARGAD 336
Query: 342 TRGLYRVHQFSKLEMFVFCQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+EMF + P+E S +E++ ++ ++ SSLGLH ++L
Sbjct: 337 TKGLYRVHEFTKVEMFAWTAPDEDASQDIFDEMLDMQTEILSSLGLHCRIL 387
>gi|422457612|ref|ZP_16534270.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
gi|315105281|gb|EFT77257.1| seryl-tRNA synthetase [Propionibacterium acnes HL050PA2]
Length = 424
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R ++++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQIARGEDSSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADTKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|297564185|ref|YP_003683158.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848634|gb|ADH70652.1| seryl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 436
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 181/329 (55%), Gaps = 3/329 (0%)
Query: 63 GGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLR 121
GG + + ID + +R++ E + A+ R R + ++ + +L L + + LR
Sbjct: 3 GGWSPDGNLQDVIDLRALREDPERLRASQRARGEDPSVADRLLGLDADRRSALSRFETLR 62
Query: 122 EERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHP 181
E+ +V + K P ER++L+ K L + E + +L DEL +PN+
Sbjct: 63 AEQKSVGRSVS-KASPEEREELLTRAKALAAEVKEAEAEAGRLADELDALLSGVPNLVEE 121
Query: 182 DVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAV 241
P GG D I +TVG P F+F +DH +LG+ L D + A+VSG++FY+L
Sbjct: 122 GAPEGGVDDFRILETVGTPRSFDFTPRDHLELGEMLGAIDMERGAKVSGARFYFLTGVGA 181
Query: 242 MLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGT 301
LE+ L+N +++ ++ GFTP+ P +VR +E GF A+ +VY + D L+GT
Sbjct: 182 QLELALLNMAMNQAVQAGFTPMIPPVLVRPETMEGTGFLGAHAD-EVYHLPADDLYLVGT 240
Query: 302 AEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
+E+P+ G H IL LP +Y +S CFR EAG+ G TRG+ RVHQF+K+EMFV+
Sbjct: 241 SEVPLAGYHSGEILPADALPNRYIGWSPCFRREAGSYGKDTRGIIRVHQFNKVEMFVYTH 300
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
P+++ H+ L+ E ++ L L ++++
Sbjct: 301 PDQAHEEHKRLLAWEREMLDKLELPYRVV 329
>gi|397654951|ref|YP_006495634.1| seryl-tRNA synthetase [Corynebacterium ulcerans 0102]
gi|393403907|dbj|BAM28399.1| seryl-tRNA synthetase [Corynebacterium ulcerans 0102]
Length = 419
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 18/324 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKE-------VDRLREERNAV 127
ID K++R+N + V + R R + EL +K+L +E D LR E A
Sbjct: 2 IDLKFLRENPDIVRESQRIRGEDP------ELVDKLLVADEERRAAIQVADELRSEHKAF 55
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K+ G+ P ER L+E LK + EE ++ + N+ D P GG
Sbjct: 56 GKKI-GQAAPEERAALLEGSNELKAKVKEAEEAQSAAESKVDELQMLFSNVV-TDAPAGG 113
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
ED I+ + VG P F+F KDH +LG++L + D +V G++FYYL + L++G+
Sbjct: 114 EDDFIVLEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGM 173
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPV 306
+N + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ +
Sbjct: 174 LNLAAQKARDNGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVAL 231
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G H D I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++
Sbjct: 232 AGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAV 291
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
H+ L+++E D+ +++ + ++++
Sbjct: 292 EQHQALLKMERDMLAAVEVPYRVI 315
>gi|337291812|ref|YP_004630833.1| seryl-tRNA synthetase [Corynebacterium ulcerans BR-AD22]
gi|384516585|ref|YP_005711677.1| seryl-tRNA synthetase [Corynebacterium ulcerans 809]
gi|334697786|gb|AEG82583.1| Seryl-tRNA synthetase [Corynebacterium ulcerans 809]
gi|334700118|gb|AEG84914.1| Seryl-tRNA synthetase [Corynebacterium ulcerans BR-AD22]
Length = 427
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 18/324 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKE-------VDRLREERNAV 127
ID K++R+N + V + R R + EL +K+L +E D LR E A
Sbjct: 10 IDLKFLRENPDIVRESQRIRGEDP------ELVDKLLVADEERRAAIQVADELRSEHKAF 63
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K+ G+ P ER L+E LK + EE ++ + N+ D P GG
Sbjct: 64 GKKI-GQAAPEERAALLEGSNELKAKVKEAEEAQSAAESKVDELQMLFSNVV-TDAPAGG 121
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
ED I+ + VG P F+F KDH +LG++L + D +V G++FYYL + L++G+
Sbjct: 122 EDDFIVLEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGM 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPV 306
+N + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ +
Sbjct: 182 LNLAAQKARDNGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVAL 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G H D I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++
Sbjct: 240 AGYHKDEIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAV 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
H+ L+++E D+ +++ + ++++
Sbjct: 300 EQHQALLKMERDMLAAVEVPYRVI 323
>gi|404212807|ref|YP_006666982.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
gi|403643606|gb|AFR46846.1| Seryl-tRNA synthetase [Gordonia sp. KTR9]
Length = 419
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 181/318 (56%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V + R+R + L + +L + E D LR E+ ++ ++ G
Sbjct: 2 IDLKTVRDNPDLVRTSQRSRGEDPGLVDALLAADAERRAAIVEADALRSEQKSLGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + I N+ P GGED ++
Sbjct: 61 KAQGEEKQALLAKGKQLAEQVKAAVSRQSEADAAATKAHRAISNIVAEGAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH ++G++L + D + A+VSGS+FY+L + L++ L+N
Sbjct: 121 LEHVGEPRDIENP-KDHLEIGESLGLLDMERGAKVSGSRFYFLTGQGAHLQLALLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KATANGFTLMIPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++ + H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAAAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|330938097|ref|XP_003305681.1| hypothetical protein PTT_18592 [Pyrenophora teres f. teres 0-1]
gi|311317187|gb|EFQ86221.1| hypothetical protein PTT_18592 [Pyrenophora teres f. teres 0-1]
Length = 509
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 196/390 (50%), Gaps = 41/390 (10%)
Query: 39 PPFRLLARAFS-APALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN 97
P FR+ A+ P QT+ A P K ID K IR N N +RN
Sbjct: 12 PSFRIQAQCPRLRPCQQTLLARRTYARPAFAP--KPTIDIKHIRQNPGLYEQNCIDRNYA 69
Query: 98 ANLE---LVLELYEKMLNVQKEVDRLREERNAV----------ANKMKGKLEPSERQKLI 144
A+ + +LEL+E+ L +Q+ LRE N + A +GK + R+ +I
Sbjct: 70 AHSKSSWRILELHEQWLELQQSSRSLRERSNRIRAHLAKTASRAKDAEGK-PVAMREGMI 128
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED--CSIIRKTVGNPSV 202
E K +K L +E +L +E++ AQ +PN++ PVG E I G+ +
Sbjct: 129 GEAKAIKAELSAVEARETQLQEEIESLAQDLPNLSSTHTPVGTEPDVLGYINAHPGSEAS 188
Query: 203 FNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
+ + H +G+ L I DF +A+ SG +Y+L + MLE L+ + L K+G+
Sbjct: 189 QSKSQQSHVDIGQELGILDFTGSAQTSGWGWYFLIGDGAMLEQALVQYALRVATKKGWKA 248
Query: 263 LTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGADQ-------CLIGTAEIPVGGIHMDS 313
+ P +V S + CGFQPR N QVY+IE A++ L GTAEIP+ G+ +
Sbjct: 249 VAPPSLVYSHIASACGFQPRDQNGEQQVYAIEQAEKDKAKPQLALAGTAEIPLAGMKVSQ 308
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH---- 369
ES LPLK S C+R EAGA G T+GLYRVH+F+K+EMF + P+ + H
Sbjct: 309 TFEESELPLKTVGVSRCYRAEAGARGADTKGLYRVHEFTKVEMFAWTSPDHAGEDHFTAQ 368
Query: 370 ---------EELIRIEEDLYSSLGLHFKLL 390
EE++ I++++ +LGLH ++L
Sbjct: 369 TTQSSEAIFEEMLSIQKEILEALGLHCRIL 398
>gi|395772032|ref|ZP_10452547.1| seryl-tRNA ligase [Streptomyces acidiscabies 84-104]
Length = 425
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKQL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + E + + N+ HPDVPVGGE+ +
Sbjct: 61 KAAGDEKAELLKKASQLASDVKAADAERDAADTETHELLLRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F+ F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGEIRDFSAEGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AISQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G T+G++RVHQF K+EMF + PE+S++ H
Sbjct: 240 MDEILDAERLPLRYAGFSPCFRREAGSHGKDTKGIFRVHQFDKVEMFSYVAPEDSEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|363422454|ref|ZP_09310530.1| seryl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
gi|359733053|gb|EHK82057.1| seryl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
Length = 420
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 180/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L +++LE D R E+ A+ K+ G
Sbjct: 2 IDLKFLRENPDAVRESQRMRGEDPGLVDVLLEADASRRAAVLAGDNARAEQKALGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L++ K L + LE + + + I N+ VP GGED +
Sbjct: 61 KASPEERPALLDGAKELAAKVKELEAEQHAAQEAFDRAHLAISNVVQDGVPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH LG++L + D + A+VSG++FY+L +L++GL+
Sbjct: 121 LETVGELPTFDFEPKDHLSLGESLGLIDMERGAKVSGARFYFLTGYGALLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR V++ GF R A+ +VY +E D L+GT+E+P+ G H
Sbjct: 181 KATANGFTMMIPPVLVRPEVMQGTGFLGRHAD-EVYRLEEDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PEE+ + HE L+
Sbjct: 240 ILDLSKGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCRPEEAAAEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ +++ + ++++
Sbjct: 300 AWERDMLAAIDVPYRVI 316
>gi|422389266|ref|ZP_16469363.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
gi|422462790|ref|ZP_16539410.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|422565531|ref|ZP_16641179.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|314965938|gb|EFT10037.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA2]
gi|315095165|gb|EFT67141.1| seryl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|327328793|gb|EGE70553.1| serine--tRNA ligase [Propionibacterium acnes HL103PA1]
Length = 424
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 183/324 (56%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE----AQCIPNMTHPDVPVGGED 189
K E+ +L+ K + G V DL K DE + A+ + N+ VP GGED
Sbjct: 61 KASGDEKAELLSRTKTIS-GEVA---DLKKAADEADAKFTDIAKTLGNVVTDGVPAGGED 116
Query: 190 CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+I++TVG P F F KDH ++G+AL D + ++SGS+FY L LE
Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N +S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ +
Sbjct: 177 LLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVAL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++
Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
++HE+L+ E+D ++L + F++L
Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVL 319
>gi|453049258|gb|EME96866.1| seryl-tRNA ligase [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 425
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + ++ + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVDIVDALLSADERRRSSGVRFDELRAEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+++ L + + + + E Q+ I N+ HPDVP GGED ++
Sbjct: 61 KATGDEKAALLKKAGELSAAVKAADAEQDEAAAEAQRLLLGIGNLVHPDVPRGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+TVG P F F KDH +LG++L D + A+VSGS+FYYL +LE+ L+N
Sbjct: 121 LETVGTPRDFAAEGFEPKDHLELGQSLGAIDVERGAKVSGSRFYYLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +V+ +E GF + A VY +E D L+GT+E+P+ H
Sbjct: 181 AIAQATAAGFTPMLTPALVKPRAMEGTGFLGQAAQ-DVYHLEKDDFYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ S LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + PEE+++ H
Sbjct: 240 MDEIIDASQLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVAPEEAEAEHA 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFQVI 319
>gi|422494802|ref|ZP_16571097.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
gi|313813962|gb|EFS51676.1| seryl-tRNA synthetase [Propionibacterium acnes HL025PA1]
Length = 424
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|335050297|ref|ZP_08543267.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|342211538|ref|ZP_08704263.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
gi|333769960|gb|EGL47039.1| serine--tRNA ligase [Propionibacterium sp. 409-HC1]
gi|340767082|gb|EGR89607.1| serine--tRNA ligase [Propionibacterium sp. CC003-HC2]
Length = 424
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|318061333|ref|ZP_07980054.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318078670|ref|ZP_07986002.1| seryl-tRNA synthetase [Streptomyces sp. SA3_actF]
Length = 416
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 174/308 (56%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ + K+ K + E+Q+L++
Sbjct: 1 MRASQRARGEDVGLVDSLLSADERRRSSGVRFDELRAEQKQL-GKLIPKAQGDEKQELLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF-- 203
L + + + + Q + + N+ HPDVPVGGE+ + +T G F
Sbjct: 60 RTGELAAAVKAADAEQSDAAAQTQDLLRRLGNLVHPDVPVGGEEDFALLETHGTIRDFEA 119
Query: 204 -NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG L D + AA+VSGS+FYYL +LE+ L+N +++ GFTP
Sbjct: 120 EGFAPKDHLELGHLLGAIDVERAAKVSGSRFYYLSGIGALLELALVNAAIAQATAAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +VR ++ GF + A VY ++ D L+GT+E+ + G HMD I+ LPL
Sbjct: 180 MLTPALVRPQAMDGTGFLGQ-AGQDVYHLKDDDLYLVGTSEVALAGYHMDEIIEADRLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S++ H L+ E+ +S
Sbjct: 239 RYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFTYVAPEDSEAEHRRLLEWEKQWLTS 298
Query: 383 LGLHFKLL 390
LGL F+++
Sbjct: 299 LGLPFRVI 306
>gi|384507652|ref|YP_005684321.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
gi|302207077|gb|ADL11419.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
Length = 419
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E + D LR E A K+ G
Sbjct: 2 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++ + N+ D P GGED I+
Sbjct: 61 QAAPEERTALLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVV-TDAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHKD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++ H+ L
Sbjct: 238 EIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+++E D+ +++ + ++++
Sbjct: 298 LKMERDMLAAVEVPYRVI 315
>gi|290959073|ref|YP_003490255.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
gi|260648599|emb|CBG71710.1| serine-tRNA ligase [Streptomyces scabiei 87.22]
Length = 425
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 179/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L++ + LK + + + E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KASAEEKAELLKRAEQLKADVKAADAERDAADTETQELLLQLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGEIRDFTAEGFAPKDHLELGTILGAIDTERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDRDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLDWEKQWLTSLELPFRVI 319
>gi|392401456|ref|YP_006438056.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis Cp162]
gi|390532534|gb|AFM08263.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis Cp162]
Length = 419
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E + D LR E A K+ G
Sbjct: 2 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++ + N+ D P GGED I+
Sbjct: 61 QAAPEERTALLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVV-TDAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +V G++FYYL + L++G++N
Sbjct: 120 LEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARENGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHKD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++ H+ L
Sbjct: 238 EIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQHQAL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+++E D+ +++ + ++++
Sbjct: 298 LKMERDMLAAVEVPYRVI 315
>gi|374628558|ref|ZP_09700943.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
gi|373906671|gb|EHQ34775.1| seryl-tRNA synthetase [Methanoplanus limicola DSM 2279]
Length = 425
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 183/321 (57%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLN---VQKEVDRLREERNAVANKM 131
++ K+IR+N + V A++ R L + +L K + +Q E++ +R RN ++ ++
Sbjct: 2 LELKFIRNNPDVVRADLNKRGDEEKLLWIDDLLAKDIKSREMQTEINTMRARRNVISREI 61
Query: 132 KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ E L+EE K+L + E +L ++ +L+ IPN+ H VPVG +D
Sbjct: 62 NDARKAKEDFSGLLEEAKSLPARIKEDEAELEEINAKLKYYQMRIPNLLHETVPVGADDS 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K G V +F +K+H +L ++ DF+ AA +SGS FY LK M+++ L
Sbjct: 122 ENVEVKKWGEAVVPSFELKNHGELAVEKNLADFERAARISGSGFYMLKGNLAMMDLALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + RG+TP+ P ++ + E N +Y+I+G D+ LI T+E P+ +
Sbjct: 182 LAVDLLTGRGYTPIIPPYMMNRAAYEGVTDLADFENV-MYAIDGEDEFLIATSEHPMAAM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+MD I E LP++ A S CFR E GA G TRGL+RVHQF+K+E F++C+PE+S + H
Sbjct: 241 YMDEIFEEKDLPIRMAGISPCFRREIGAHGLDTRGLFRVHQFNKVEQFIYCKPEDSWAMH 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EEL++ EDLY LGL ++++
Sbjct: 301 EELLKNSEDLYQMLGLPYRVV 321
>gi|300859395|ref|YP_003784378.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
gi|375289584|ref|YP_005124125.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 3/99-5]
gi|383315143|ref|YP_005375998.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis P54B96]
gi|384505560|ref|YP_005682230.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
gi|384509746|ref|YP_005686414.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
gi|384511829|ref|YP_005691407.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis PAT10]
gi|385808448|ref|YP_005844845.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 267]
gi|387137479|ref|YP_005693459.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 42/02-A]
gi|300686849|gb|ADK29771.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
gi|302331637|gb|ADL21831.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
gi|308277330|gb|ADO27229.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
gi|341825768|gb|AEK93289.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis PAT10]
gi|348607924|gb|AEP71197.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576873|gb|AEX40476.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 3/99-5]
gi|380870644|gb|AFF23118.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis P54B96]
gi|383805841|gb|AFH52920.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 267]
Length = 427
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E + D LR E A K+ G
Sbjct: 10 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKI-G 68
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++ + N+ D P GGED I+
Sbjct: 69 QAAPEERTALLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVV-TDAPAGGEDDFIV 127
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +V G++FYYL + L++G++N
Sbjct: 128 LEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 187
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 188 KARENGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHKD 245
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++ H+ L
Sbjct: 246 EIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQHQAL 305
Query: 373 IRIEEDLYSSLGLHFKLL 390
+++E D+ +++ + ++++
Sbjct: 306 LKMERDMLAAVEVPYRVI 323
>gi|424859269|ref|ZP_18283283.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
gi|356661778|gb|EHI42089.1| seryl-tRNA synthetase [Rhodococcus opacus PD630]
Length = 418
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 175/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + + L + I N+ P GGED +
Sbjct: 61 QASPEERPALLEGSKELAAKVKQAEAEQHEAQAALDAAHRAISNVVQEGAPAGGEDDFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F KDH +LG++L + D + A+VSG++FY+L ML++G++
Sbjct: 121 LETVGEIPTFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGFGAMLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF A+ ++Y + D L+GT+E+P+ G H
Sbjct: 181 KAMANGFQMMIPPVLVRPEIMAGTGFLGAHAD-EIYHLADDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L+
Sbjct: 240 ILDLADGAKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E D+ +++ + ++++
Sbjct: 300 AWERDMLAAIDVPYRVI 316
>gi|282854499|ref|ZP_06263835.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|386070407|ref|YP_005985303.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
gi|422467043|ref|ZP_16543600.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|422470543|ref|ZP_16547063.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|422577215|ref|ZP_16652751.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|282582360|gb|EFB87741.1| serine--tRNA ligase [Propionibacterium acnes J139]
gi|314921979|gb|EFS85810.1| seryl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|314980741|gb|EFT24835.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|315090940|gb|EFT62916.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|353454773|gb|AER05292.1| seryl-tRNA synthetase [Propionibacterium acnes ATCC 11828]
Length = 424
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 183/324 (56%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE----AQCIPNMTHPDVPVGGED 189
K E+ +L+ K + G V DL K DE + A+ + N+ VP GGED
Sbjct: 61 KASGDEKAELLSRTKTIS-GEVA---DLKKAADEADAKFTDIAKTLGNVVIDGVPAGGED 116
Query: 190 CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+I++TVG P F F KDH ++G+AL D + ++SGS+FY L LE
Sbjct: 117 EGVIKETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N +S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ +
Sbjct: 177 LLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVAL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++
Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAE 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
++HE+L+ E+D ++L + F++L
Sbjct: 296 AWHEKLLSFEKDFITALQIPFQVL 319
>gi|320335112|ref|YP_004171823.1| seryl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
gi|319756401|gb|ADV68158.1| Seryl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
Length = 422
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 179/319 (56%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IRDN + V I+ + +L+ +L + +++ ++ ++ L+ ERNA A K+ K
Sbjct: 2 LDLKFIRDNADTVRHAIQVKGVPLDLDELLRVDRELVELRARLETLQAERNANA-KLVPK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
ER LI GK+L E + E L D L+Q +PN+ HP VPVG +D +
Sbjct: 61 AGADERAALIARGKDLAEEIRAQEPALRAHEDALKQLLLRVPNIPHPSVPVGRDDSENVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F DH QL + D + A VSGS+ Y LK +AV LE +IN+ L
Sbjct: 121 LRREGTLPTFSFTPLDHVQLLEKHGWADLERVARVSGSRSYLLKGDAVRLEQAIINYALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT ++T +VR + G P G QVY IEGAD L GTAE+PV +H
Sbjct: 181 TLADAGFTLVSTTALVRPDTLVGTGHFP-GGEDQVYKIEGADLMLAGTAEVPVNSLHAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD--SYHEE 371
+L+E+ LP+ YAA S FR+EAG+AG RGL RVH+F K+E +V + +E++ + E
Sbjct: 240 VLAEADLPVTYAAISAAFRSEAGSAGRDVRGLMRVHEFKKVEQYVITRADEAEGLAMFER 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + L L +++L
Sbjct: 300 LLGNAETILRGLELPYRVL 318
>gi|341039038|gb|EGS24030.1| putative seryl-tRNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 535
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 185/352 (52%), Gaps = 33/352 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVA 128
K ID K IR N E + N +RN A + EL+ + Q+E LRE N +
Sbjct: 72 KPVIDLKHIRQNPELYAQNCLDRNYKAAATYPARINELFVQWQAKQREGRGLRERGNLLR 131
Query: 129 NKMK--------------GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ L+ R++L+EE + +K L +EE L DE+Q+ A
Sbjct: 132 RQLADPNSSIDDGSGDDVNGLKGMSREQLLEEARKIKAELAAIEEAESSLADEMQRLALA 191
Query: 175 IPNMTHPDVPVGGED---CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
IPN+T PVG E I P + K H +G L IFDF AA SG
Sbjct: 192 IPNLTSKHTPVGDEPRVLSFINDHPEPGPDPSDRVWKSHAHIGAELGIFDFAGAATASGW 251
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+YYL +EA LE L+++ L+ + G+ ++ P +V S + CGFQPR N TQ+Y
Sbjct: 252 GWYYLLDEAAQLEQALVSYALTAATRAGWRQVSPPSMVYSHIASACGFQPRDQNGETQIY 311
Query: 290 SIEGA---------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
+I + + C+ GTAEIP+ G+ D+ + E+ LP+K A S C+R EAGA G+
Sbjct: 312 AIAQSAEDAARGKPEWCMAGTAEIPLAGMKADTTIDEASLPMKLVAASRCYRAEAGARGS 371
Query: 341 ATRGLYRVHQFSKLEMFVFCQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+E+F + P+E ++ E++ ++ ++ SLGLH ++L
Sbjct: 372 ETKGLYRVHEFTKVELFAWTHPDEGLTEEVFNEMVDLQTEILQSLGLHCRVL 423
>gi|386741274|ref|YP_006214454.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 31]
gi|384477968|gb|AFH91764.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 31]
Length = 427
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E + D LR E A K+ G
Sbjct: 10 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKI-G 68
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++ + N+ D P GGED I+
Sbjct: 69 QAAPEERAVLLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVV-TDAPAGGEDDFIV 127
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +V G++FYYL + L++G++N
Sbjct: 128 LEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 187
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 188 KARENGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHKD 245
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++ H+ L
Sbjct: 246 EIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQHQTL 305
Query: 373 IRIEEDLYSSLGLHFKLL 390
+++E D+ +++ + ++++
Sbjct: 306 LKMERDMLAAVEVPYRVI 323
>gi|343962283|dbj|BAK62729.1| seryl-tRNA synthetase, mitochondrial precursor [Pan troglodytes]
gi|410226426|gb|JAA10432.1| seryl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410259570|gb|JAA17751.1| seryl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410287116|gb|JAA22158.1| seryl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
gi|410330687|gb|JAA34290.1| seryl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
Length = 518
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 180/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+ P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMMVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|302559736|ref|ZP_07312078.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
gi|302477354|gb|EFL40447.1| seryl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
Length = 425
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+E L + + D E Q + N+ HPDVPVGGE+ +
Sbjct: 61 KAAGDEKAELLERTGRLAADVKAADADRDAAASETQDLLLKLSNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F+ F +DH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTIRDFDAEGFAPRDHLELGQLLAAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|379716256|ref|YP_005304593.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 316]
gi|387139543|ref|YP_005695522.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387141509|ref|YP_005697487.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389851310|ref|YP_006353545.1| seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 258]
gi|349736021|gb|AEQ07499.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355393300|gb|AER69965.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377654962|gb|AFB73311.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 316]
gi|388248616|gb|AFK17607.1| Seryl-tRNA synthetase [Corynebacterium pseudotuberculosis 258]
Length = 427
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E + D LR E A K+ G
Sbjct: 10 IDLKFLRENPDIVRESQRIRGEDPELVDKLLAADEARRAAIQVADELRSEHKAFGKKI-G 68
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++ + N+ D P GGED I+
Sbjct: 69 QAAPEERAVLLEGSNELKAKVKEAEEAQSAAEAKVDELQMLFSNVV-TDAPAGGEDDFIV 127
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +V G++FYYL + L++G++N
Sbjct: 128 LEHVGEPRTFDFEPKDHLELGESLGLIDTKRGTKVGGARFYYLTGDGAFLQLGMLNLAAQ 187
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR +++ GF GA++ ++Y +E D L+GT+E+ + G H D
Sbjct: 188 KARENGFQLMIPPVLVRPEIMQGTGFL--GAHSDEIYYLERDDLYLVGTSEVALAGYHKD 245
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PE++ H+ L
Sbjct: 246 EIIDLNKGPIKYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVFCKPEDAVEQHQTL 305
Query: 373 IRIEEDLYSSLGLHFKLL 390
+++E D+ +++ + ++++
Sbjct: 306 LKMERDMLAAVEVPYRVI 323
>gi|395645605|ref|ZP_10433465.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
gi|395442345|gb|EJG07102.1| Seryl-tRNA synthetase [Methanofollis liminatans DSM 4140]
Length = 425
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 179/321 (55%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEK---MLNVQKEVDRLREERNAVANKM 131
++ K+IR N E V A++ R + V +L EK + EVDRLR RN + ++
Sbjct: 2 LELKFIRANPEIVRADLLKRGYTEKVAWVDDLLEKDQKSREITIEVDRLRNRRNVIGREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + + L++E + + E +L +T+ + +PN+ H VPVG +D
Sbjct: 62 NETRKAGGDIAGLLKEAAAIPGEIKEAEAELQAITERVHYYLMRLPNILHESVPVGKDDT 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K G P V F +++H +L DF+ AA+VSGS FYYLK V+L+M L
Sbjct: 122 ENVEVKRWGEPKVPPFELRNHGELAAEQGWADFERAAKVSGSGFYYLKGRLVLLDMALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ L ++ RG+TPL+ P ++ + E + +Y I+G D LI T+E P+ +
Sbjct: 182 FALDLLVGRGYTPLSPPYMMNRAAYEGVTDLADFEDV-MYKIDGEDAYLIATSEHPMAAM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ D I E LPLK+A S CFR E G+ G T+GL+RVHQF+K+E F+FC+PEES ++H
Sbjct: 241 YKDEIFEEKDLPLKFAGISPCFRKEIGSHGIDTKGLFRVHQFNKIEQFIFCRPEESWAFH 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EEL+ E ++ LGL + ++
Sbjct: 301 EELLANAEAIFQGLGLPYHVV 321
>gi|41327072|emb|CAF20916.1| SERYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
Length = 432
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 182/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + V A+ R + A ++ ++ E K D LR E+ A K+ G
Sbjct: 12 IDLKFLRDNPDVVRASQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKI-G 70
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E ++ + + N+ P GGED ++
Sbjct: 71 QASPEDRPALLEGSNELKAKVKDAEAAQEAAEAKVNELQMKLSNVVS-GAPAGGEDDFVV 129
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T+G P F+F KDH +LG++L + D +VSG++FYYL + ML++G++
Sbjct: 130 LETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGMLMLAAQ 189
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF+ + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 190 KAREAGFSMMIPPVLVRPEIMAGTGFLGDHSE-EIYYLERDDMYLVGTSEVALAGYHKDE 248
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE+++ H++L+
Sbjct: 249 IIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDVHQQLL 308
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+++ +++ + ++++
Sbjct: 309 GMEKEMLAAIEVPYRVI 325
>gi|172039818|ref|YP_001799532.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
gi|171851122|emb|CAQ04098.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 446
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 183/323 (56%), Gaps = 7/323 (2%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANK 130
+A ID K +R+N + V + R R + A ++ +LE + D+ R E+ A +
Sbjct: 23 EAMIDLKLLRENPDLVRESQRTRGEDPALVDQLLEADRQRREAISAADQARAEQKAFSKA 82
Query: 131 MKGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
M K+ + E+ +L EEGK + + LE L I N+ P GG
Sbjct: 83 MGQKMAAASDEEKAQLREEGKQKAQAVKDLEATQSAAEQALHDLQMQISNVVE-GAPAGG 141
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E+ ++ + VG P+ F+F KDH +LG++L + D +VSGS+FY+L + +L++G+
Sbjct: 142 EEDFVVLEHVGEPTTFDFEPKDHLELGESLGLIDMKRGTKVSGSRFYFLTGDGALLQLGM 201
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+ + ++GF + P +VR V+ GF A+ +VY +E D L+GT+E+ +
Sbjct: 202 MQLAARKATEKGFQLMIPPVLVRPEVMGGTGFLGAHAD-EVYRLEEDDLYLVGTSEVALA 260
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G H D I+ P +YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE++
Sbjct: 261 GYHSDEIIDLDE-PKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCRPEQATE 319
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
H+EL+++E+D+ +++ + ++++
Sbjct: 320 IHQELLQLEKDMLAAIDVPYRVI 342
>gi|389862013|ref|YP_006364253.1| seryl-tRNA synthetase [Modestobacter marinus]
gi|388484216|emb|CCH85748.1| Seryl-tRNA synthetase [Modestobacter marinus]
Length = 430
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 170/301 (56%), Gaps = 3/301 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N + V A+ R R ++ +L + +L + K D LR E+ A + ++G
Sbjct: 2 IDLRLVRENPDLVRASQRARGADESLVDALLAADAERRAAVKAADDLRGEQKAASQAVRG 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ER ++E+ K L + EE L IPN+ HPDVP GGED ++
Sbjct: 62 ASK-EERPAVLEKAKALAAAVKEAEEAERTADAALHALHLRIPNVVHPDVPPGGEDDAVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG ++F VKDH Q+G+AL D + A+VSG++FY+L +LE L +S
Sbjct: 121 LRTVGEVPTYDFEVKDHLQIGEALGAIDMERGAKVSGARFYFLTGPGALLEFALAQLAVS 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFTP+ P +V+ +E GF + +VY IE D L+GT+E+ + G+H
Sbjct: 181 RAVAAGFTPVVAPALVKPEAMEGTGFLGE-HDEEVYRIERDDLYLVGTSEVALAGMHARE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L S P +YA +S CFR EAG+ G TRG+ RVH F K+EMF FC P+E+++ H L+
Sbjct: 240 VLDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHWFDKVEMFSFCAPDEAEAEHRRLL 299
Query: 374 R 374
+
Sbjct: 300 Q 300
>gi|350568410|ref|ZP_08936812.1| serine--tRNA ligase [Propionibacterium avidum ATCC 25577]
gi|348661630|gb|EGY78313.1| serine--tRNA ligase [Propionibacterium avidum ATCC 25577]
Length = 424
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 182/324 (56%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + ++ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDIVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE----AQCIPNMTHPDVPVGGED 189
K E+ +L+ K++ + DL K DE + A+ + N+ DVP GGED
Sbjct: 61 KASGDEKTELLARTKSIASEV----SDLKKAADEADAKFIELAKTLGNIVIDDVPAGGED 116
Query: 190 CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+I++TV P F F KDH ++G+AL D + +++GS+FY L LE
Sbjct: 117 EGVIKETVSTPRDFVAEGFEPKDHLEIGEALGAIDMERGTKIAGSRFYVLTGVGAQLEFA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N +S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ +
Sbjct: 177 LLNLAMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVAL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++
Sbjct: 236 AAFHSDEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPDEAE 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+HE+L+ E+D S+L + F++L
Sbjct: 296 GWHEKLLSFEKDFISALEIPFQVL 319
>gi|310796701|gb|EFQ32162.1| seryl-tRNA synthetase [Glomerella graminicola M1.001]
Length = 510
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 186/349 (53%), Gaps = 30/349 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLE---LVLELYEKMLNVQKEVDRLREE----R 124
K ID + IR+N N +RN A + + +++ + +QK+ +RE R
Sbjct: 50 KPIIDIRHIRENAVLYEQNCLDRNYTAQSKSPARINQIFAQWQALQKDSRAVRERSNLLR 109
Query: 125 NAVANKMKGK-----LEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+AN + +E SE R++L+EE + LK+ L +E+D +L +E++ A IPN
Sbjct: 110 RQIANPASSRDGAEFVEMSEMSREELLEEARVLKQRLTAVEQDEARLVEEMEALALAIPN 169
Query: 178 MTHPDVPVGGED---CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
+T P+G E I PS + + H +G L + DF AA SG +Y
Sbjct: 170 LTSEATPLGDEPNVLSYINEHPAEAPSSSDKVWRSHVHIGSELGLLDFAAAGNTSGWGWY 229
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIE 292
YL +EA LE L+ + L+ + + + P IV S + CGFQPR N QVYS+
Sbjct: 230 YLLDEAAQLEQALVQYALAVATRHRWRQVAPPSIVYSHIASACGFQPRDQNGEQQVYSLA 289
Query: 293 GADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
++ CL GT+EIP+ G+ +S L S LP+K A S C+R EAGA G +T+
Sbjct: 290 QSEADAERGKPELCLAGTSEIPLAGMKAESTLDASELPMKRVAVSRCYRAEAGARGASTK 349
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+EMF + PE ++ +E++ I+ ++ SLGLH ++L
Sbjct: 350 GLYRVHEFTKVEMFAWTPPEADETIEIFQEMVDIQTEILGSLGLHCRVL 398
>gi|406960362|gb|EKD87446.1| hypothetical protein ACD_36C00079G0003 [uncultured bacterium]
Length = 409
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 20/323 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N + +N+ + + + +L+L +K + ++LREERN K
Sbjct: 2 LDIKFIRENLQVCKEAAKNKGRDVDWDGLLKLDDKRRELIGLTEKLREERN--------K 53
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS--- 191
L +R E G+ +K+ L LEE+L + ++ +PN+ P VP+G +D S
Sbjct: 54 LTQDDR----ERGREVKQELKKLEEELRDVEEKFGLLMLTVPNVPDPSVPIG-KDASGNK 108
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+RK G FNFP+ DH +L K+LD+ DF +V G + Y+LKN+A +E+ L+ +T
Sbjct: 109 EVRKW-GKLPKFNFPILDHIELAKSLDLIDFGRGTKVGGFRAYFLKNDAAQMELALMWYT 167
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L+++ K+G+TPL P +VR + G P G +VY IE D L GTAE+PV
Sbjct: 168 LNKLTKKGYTPLIAPSLVRDFTLFGNGQFPWG-REEVYKIEKDDLYLAGTAEVPVTAYFS 226
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS--YH 369
D IL E LP K+ AFS CFR EAG+ G T+G YR+HQF+K+E + E ++S H
Sbjct: 227 DEILVEKDLPKKFVAFSPCFRREAGSYGKDTKGAYRLHQFNKIEQVIITTAETNNSLTLH 286
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
EEL+ E++ L L ++++L
Sbjct: 287 EELLANAEEILKDLELPYRVMLM 309
>gi|171690094|ref|XP_001909979.1| hypothetical protein [Podospora anserina S mat+]
gi|170945002|emb|CAP71113.1| unnamed protein product [Podospora anserina S mat+]
Length = 631
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 189/352 (53%), Gaps = 33/352 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR N + S N +RN + E + L+ + QK LRE N +
Sbjct: 166 KPLLDIKHIRLNPDLYSQNCIDRNYKSLAEYPHKINTLFAEWQAQQKAGRALRERGNILR 225
Query: 129 NKMKG-----KLEPSE---------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ G + +P E R++++EE + LK GL +EE KL E+++ A
Sbjct: 226 RRLAGPGGASRDDPREIIDEFGDMSREEILEEARKLKAGLAGIEETEGKLQAEMERLALA 285
Query: 175 IPNMTHPDVPVGGED---CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
IPN+T + P G E I P++ + + H +G L + DF AA SG
Sbjct: 286 IPNLTSDETPRGTEPEVMSYINNHPEPEPALSDRVWRSHVHVGAELGLLDFAGAASSSGW 345
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+YYL +EA LE LI++ L+ + G+ ++ P +V + CGFQPR AN TQ+Y
Sbjct: 346 GWYYLLDEAADLEQALISYALATATRAGWRQVSPPSVVYGHIAAACGFQPRDANGETQIY 405
Query: 290 SIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
+I + + L GTAEIP+ G+ D++L E+ LPLK A S C+R EAGA G+
Sbjct: 406 AIAQSREDAARGKPELVLAGTAEIPLAGMKADTVLDEADLPLKRVAVSRCYRAEAGARGS 465
Query: 341 ATRGLYRVHQFSKLEMFVFCQPE--ESDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+EMF + P+ E++ +E+I ++ ++ LGLH ++L
Sbjct: 466 ETKGLYRVHEFTKVEMFSWTLPDQVETEEIFDEMIDLQTEILGGLGLHCRVL 517
>gi|161485956|ref|NP_739334.2| seryl-tRNA synthetase [Corynebacterium efficiens YS-314]
gi|259505719|ref|ZP_05748621.1| serine--tRNA ligase [Corynebacterium efficiens YS-314]
gi|30173164|sp|Q8FLY5.2|SYS_COREF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|259166692|gb|EEW51246.1| serine--tRNA ligase [Corynebacterium efficiens YS-314]
Length = 419
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 174/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + V + R + L + +L E + D LR E+ A K+ G
Sbjct: 2 IDLKFLRDNPDVVRTSQITRGEDPALVDELLSADEARRQAIQVADELRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E + + N+ P GGED ++
Sbjct: 61 QASPEDRPALLEGSNELKAKVKEAEAAQETAEQRVHDLQMKLSNVVE-GAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +VSG++FYYL + ML++G++
Sbjct: 120 LEHVGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGMLTLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KATAAGFTMMIPPVLVRPEIMAGTGFLGDHSE-EIYYLERDDMYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PEE++ H L+
Sbjct: 239 IIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEEAEEQHRRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+D+ +++ + ++++
Sbjct: 299 EMEKDMLAAVEVPYRII 315
>gi|379733780|ref|YP_005327285.1| seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
gi|378781586|emb|CCG01236.1| Seryl-tRNA synthetase [Blastococcus saxobsidens DD2]
Length = 433
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 174/317 (54%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RDN + V A+ R R ++ +L + +L K D LR E+ + + +K
Sbjct: 2 IDLRLLRDNPDLVRASQRARGADESLVDALLAADVARREAVKRADDLRAEQKSASQAVK- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER ++E K L + EE L+ IPN+ +VP GGED ++
Sbjct: 61 KATPEERPAVLERAKALAAEVREAEEAQRAADAALRAVHTRIPNVVADEVPPGGEDDAVP 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG ++F V+DH ++G+ L D + A+VSGS+FY+L +LE L +S
Sbjct: 121 LRTVGEVPTYDFAVRDHIEIGETLGAIDMERGAKVSGSRFYFLTGPGALLEFALAQLAIS 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFTP+ P +VR +E GF + +VY IE D L+GT+E+ + G+H
Sbjct: 181 RAVAAGFTPVIAPALVRPEAMEGTGFLGE-HDEEVYRIERDDLYLVGTSEVALAGMHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
+L S P +YA +S CFR EAG+ G TRG+ RVH F K+EMF F +PE++ + H L+
Sbjct: 240 VLELSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHWFDKVEMFSFARPEDTAAEHLRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
EE+ +L L ++++
Sbjct: 300 AWEEEFLQALELPYRVV 316
>gi|453086638|gb|EMF14680.1| seryl-tRNA synthetase [Mycosphaerella populorum SO2202]
Length = 500
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 183/349 (52%), Gaps = 35/349 (10%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA---NLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N N +RN N LEL+E++ Q E++ R N + ++
Sbjct: 39 LDVKHIRNNPGLYEQNCIDRNYGPFAKNGWRTLELHERLTKQQSELNESRRRSNVIGKEL 98
Query: 132 KGKL----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
+ + L+EE K LK L E D + +E+Q+ A +PN++ D PVG
Sbjct: 99 SRHAANGGDDEGKTALLEEAKALKAKLSGFEADEKAMHEEMQRLAWELPNLSSLDTPVGD 158
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E +R T+G N K H +GK LD+ DF+A+A SG +Y+L+NEA +LE L
Sbjct: 159 E--PQLRATIGERLSTNTSGKSHVDIGKELDLLDFEASATTSGWGWYFLQNEAALLEQAL 216
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG--ANTQVYSIE-------GADQ-- 296
I + LS +KRG+ +T P +V S + CGF PR TQ+Y+IE D+
Sbjct: 217 IQYALSVAMKRGWKVMTPPSLVYSHIASACGFMPRDQHGETQIYNIEQQHVQNKNDDRPS 276
Query: 297 -CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
L GTAEIP G + L +PLK S C+R EAGA G T+GLYRVH+F+K+E
Sbjct: 277 LVLAGTAEIPFAGSQANRTLRAEDMPLKVIGPSRCYRAEAGARGVDTKGLYRVHEFTKVE 336
Query: 356 MFVFCQP---EESDSYHE-----------ELIRIEEDLYSSLGLHFKLL 390
MF + P E+D + + E++ I+ ++ +SLGL+ K+L
Sbjct: 337 MFAWTLPPSDHEADRFGDVETPQAEEIFAEMLEIQTEILTSLGLYGKVL 385
>gi|23308986|ref|NP_602083.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|145296881|ref|YP_001139702.1| seryl-tRNA synthetase [Corynebacterium glutamicum R]
gi|161486716|ref|YP_227132.2| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|417971826|ref|ZP_12612744.1| seryl-tRNA synthetase [Corynebacterium glutamicum S9114]
gi|30173172|sp|Q8NLP6.1|SYS_CORGL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|21325666|dbj|BAC00287.1| Seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|140846801|dbj|BAF55800.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043912|gb|EGV39598.1| seryl-tRNA synthetase [Corynebacterium glutamicum S9114]
gi|385144974|emb|CCH26013.1| seryl-tRNA synthetase [Corynebacterium glutamicum K051]
Length = 422
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 181/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + V A+ R + L + ++ E K D LR E+ A K+ G
Sbjct: 2 IDLKFLRDNPDVVRASQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E ++ + + N+ P GGED ++
Sbjct: 61 QASPEDRPALLEGSNELKAKVKDAEAAQEAAEAKVNELQMKLSNVVS-GAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T+G P F+F KDH +LG++L + D +VSG++FYYL + ML++G++
Sbjct: 120 LETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF+ + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KAREAGFSMMIPPVLVRPEIMAGTGFLGDHSE-EIYYLERDDMYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE+++ H++L+
Sbjct: 239 IIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDVHQQLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+++ +++ + ++++
Sbjct: 299 GMEKEMLAAIEVPYRVI 315
>gi|433601980|ref|YP_007034349.1| Seryl-tRNA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407879833|emb|CCH27476.1| Seryl-tRNA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 416
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 183/318 (57%), Gaps = 8/318 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N EAV A+ R R + A ++ +L E+ D LR E+ A ++ G
Sbjct: 2 IDLRALRENPEAVRASQRARGEDEAVVDALLSADERRRAAIARADALRGEQKAFGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ER+ L+ +GK L + E + + EL + + +PN+ HPD P GG D +
Sbjct: 61 RARGEEREALLAKGKELAAEVKAAEAEQSRAETELDELHRAVPNVVHPDAPAGGVDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P VF+F DH LG L D + A+VSGS+FY+L LE+ L+N ++
Sbjct: 121 LKHVGEPRVFDFEPLDHLDLGTRLGGIDMERGAKVSGSRFYFLTGVLAQLELALLNMAVA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ K GFT + TP +VR ++ GF GA+ ++VY + D L+GT+E+P+ G H D
Sbjct: 181 QATKAGFTLMITPTLVRPEIMAGTGFL--GAHASEVYRLRDDDLYLVGTSEVPLAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL +YA +S C+R EAG+ G TRG+ RVHQF+K+EMF + +PE++++ H L
Sbjct: 239 EILDGE---RRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYVRPEDAEAEHARL 295
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + + + ++++
Sbjct: 296 LAWEEEMLAKIEVPYRVI 313
>gi|309812922|ref|ZP_07706650.1| serine--tRNA ligase [Dermacoccus sp. Ellin185]
gi|308432994|gb|EFP56898.1| serine--tRNA ligase [Dermacoccus sp. Ellin185]
Length = 437
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 185/335 (55%), Gaps = 21/335 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVA----- 128
ID + +RDN +AV A+ R R ++ + + +LEL + E +R+R E+ V+
Sbjct: 2 IDIRLLRDNPDAVRASQRARGADEGVVDRILELDATRRSSLGEFERVRAEQKQVSKSVGA 61
Query: 129 -----NKMKGKLEPSERQKLIEEGKNLKEGLVTLE---EDLVKLTDELQQE----AQCIP 176
NK K + SE +L E +E TL ++L DE +E + +P
Sbjct: 62 AMGALNKAKKGGDDSEVARLQAEADAARENAATLSARVKELEATADEAGKEFDALLRTVP 121
Query: 177 NMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
N+ VP GGED + KTVG F+F KDH ++G+ + D + +VSGS+FY+L
Sbjct: 122 NVVLDGVPAGGEDDFVTVKTVGEAPTFDFEPKDHLEIGELIGAIDMERGTKVSGSRFYFL 181
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
K LE+ L+ L + I FTP+ TP +VR ++ GF + ++Y ++ D
Sbjct: 182 KGVGARLELALLQMALDQAIANDFTPMITPTLVRPETMQGTGFDV-AHDAEIYRVQEEDN 240
Query: 297 C-LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
L+GT+E+ + G H D IL+ P++YA +S C+R EAG+ G TRG+ RVHQF+K+E
Sbjct: 241 LYLVGTSEVALAGYHADEILNVD-APVRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVE 299
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
MF +C+ E++++ H ++ EE++ + L ++++
Sbjct: 300 MFSYCRIEDAEAEHARMLAWEEEMLAKCELSYRVI 334
>gi|184201584|ref|YP_001855791.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201]
gi|238689205|sp|B2GGG9.1|SYS_KOCRD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183581814|dbj|BAG30285.1| seryl-tRNA synthetase [Kocuria rhizophila DC2201]
Length = 434
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R + + A+ R ++A L + +LE + + + + LR E+NA K+
Sbjct: 2 IDINELRADPDTYRASQTARGADAGLVDRILEADSRRRSAITDFESLRAEQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q+L+ + K L + + + QQ PN+ +P GGED +
Sbjct: 61 RAQGEEKQQLLAQVKQLAADVKAAQAAADEAQATQQQLVTQFPNLIVEGIPAGGEDDFVQ 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G P F F +DH +LG+ LD D + A+VSGS+FY+LK + LE L+
Sbjct: 121 LRTEGTPRDFAAEGFEPRDHLELGELLDGIDMERGAKVSGSRFYFLKRDVARLETALLMA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ GF P+TTP +VR ++ GF + ++Y + D L+GT+E+ + G H
Sbjct: 181 AQDLALDNGFIPMTTPNLVRPGIMNGTGFDVE-HDDEIYRVGKDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S PL+YA +S C+R EAG+AG TRG+ RVHQF+KLEMFV+C PE++ + HE
Sbjct: 240 SDEILDLSGGPLRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFVYCHPEDAAAEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE + + GL ++++
Sbjct: 300 RLLAWEEQMLQACGLAYRVI 319
>gi|23494568|dbj|BAC19534.1| putative seryl-tRNA synthetase [Corynebacterium efficiens YS-314]
Length = 448
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 174/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + V + R + L + +L E + D LR E+ A K+ G
Sbjct: 31 IDLKFLRDNPDVVRTSQITRGEDPALVDELLSADEARRQAIQVADELRSEQKAFGKKI-G 89
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E + + N+ P GGED ++
Sbjct: 90 QASPEDRPALLEGSNELKAKVKEAEAAQETAEQRVHDLQMKLSNVVE-GAPAGGEDDFVV 148
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F KDH +LG++L + D +VSG++FYYL + ML++G++
Sbjct: 149 LEHVGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGMLTLAAQ 208
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 209 KATAAGFTMMIPPVLVRPEIMAGTGFLGDHSE-EIYYLERDDMYLVGTSEVALAGYHKDE 267
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PEE++ H L+
Sbjct: 268 IIDLNNGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEEAEEQHRRLL 327
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+D+ +++ + ++++
Sbjct: 328 EMEKDMLAAVEVPYRII 344
>gi|227834214|ref|YP_002835921.1| seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
gi|227455230|gb|ACP33983.1| Seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 434
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 182/319 (57%), Gaps = 4/319 (1%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V A+ NR + +L + +L E+ + D+LR E+ A K+
Sbjct: 14 GVIDLKFLRENPDVVRASQVNRGEDPSLVDQLLAADEQRRAAIVKADQLRSEQKAFGKKI 73
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
G+ P ER L+E LKE + E+ ++ + + N+ P GGED
Sbjct: 74 -GQASPEERPALLEGSNELKEKVKAAGEEAAAAEAKVTELQYQLSNVVE-GAPAGGEDDF 131
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I+ + VG F+F KDH +LG+ L + D A+V G++FYYL + L++G++
Sbjct: 132 IVLEEVGEKPQFDFEPKDHLELGETLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLA 191
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + GF + P +VR V++ GF + ++ ++Y + D L+GT+E+ + G H
Sbjct: 192 AQKAREAGFKLMIPPVLVRPDVMQGTGFLGQHSD-EIYYLPADDLYLVGTSEVALAGYHK 250
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE+++ H++
Sbjct: 251 EEIIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEMHQK 310
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ +E+D+ ++ L ++ +
Sbjct: 311 LLNMEKDMLEAMELSYRTI 329
>gi|418467887|ref|ZP_13038746.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
gi|371551499|gb|EHN78788.1| seryl-tRNA synthetase [Streptomyces coelicoflavus ZG0656]
Length = 412
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 174/308 (56%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ + K+ GK E+ +L++
Sbjct: 1 MRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGL-GKLIGKAAGDEKAELLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF-- 203
+ LK + + + E Q+ Q + N+ HPDVPVGGE+ + +T G F
Sbjct: 60 RAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEEDFVTLETHGTHRDFAA 119
Query: 204 -NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N +++ GFTP
Sbjct: 120 EGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQATAAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +VR + GF + A VY ++ D L+GT+E+P+ HMD IL LPL
Sbjct: 180 MLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYHMDEILDAERLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE++ + H+ L+ E+ +S
Sbjct: 239 RYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDTQAEHQRLLEWEKQWLTS 298
Query: 383 LGLHFKLL 390
L L F+++
Sbjct: 299 LELPFRVI 306
>gi|255324118|ref|ZP_05365242.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
gi|311740372|ref|ZP_07714201.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
gi|255298819|gb|EET78112.1| serine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
gi|311304556|gb|EFQ80630.1| serine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 418
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 182/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ NR + +L + +LE E+ ++ D LR E+ A K+ G
Sbjct: 2 IDLKLLRENPDVVRASQVNRGEDPSLVDQLLEADEQRRAAIQKADELRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE ++++ + N+ P GGED ++
Sbjct: 61 QASPEERPALLEGSNELKAKVKEAEEAQSAAEAKVEELQYKLDNVVE-GAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG++L + D A+V G++FYYL + L++G++
Sbjct: 120 IEEVGQIPEFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF + ++ ++Y + D L+GT+E+ + G H D
Sbjct: 180 KAREAGFKLMIPPVLVRPDIMSGTGFLGQHSD-EIYYLPADDMYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE+++ H+ L+
Sbjct: 239 IIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEMHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+D+ +++ L ++ +
Sbjct: 299 SMEKDMLAAMELPYRTI 315
>gi|148271694|ref|YP_001221255.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166219864|sp|A5CNA2.1|SYS_CLAM3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|147829624|emb|CAN00539.1| serS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 426
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 182/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
ID + +RD+ + V A+ R ++ + + V E+ V E + LR E+NA K+
Sbjct: 2 IDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRRAV-TEFEGLRAEQNA-HGKLV 59
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
K + +++ +LI E + LK + +E + L + + IPN+ VP GGED
Sbjct: 60 AKADKADKPRLIAEVQELKARVTAAQERAQEAESALDEAMRRIPNIVIDGVPAGGEDDWA 119
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + VG F+F +DH ++G+ LD D A+VSG++F+YLK LE+ L+N+ L
Sbjct: 120 LVREVGAKPSFDFAPRDHLEIGEILDAIDMGRGAKVSGARFHYLKGIGARLEIALMNFGL 179
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ G PL TP +V+ ++ GF A+ +VY ++ D L GT+E+ + G H D
Sbjct: 180 ARALEAGLVPLITPTLVKPEIMAGTGFLGAHAD-EVYHLDDDDLYLTGTSEVALAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P++YA +S C+R EAG+ G TRG+ RVHQF KLEMF + P ++++ HE L
Sbjct: 239 EILDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ ++E + LGL ++++
Sbjct: 299 LAMQERMMQDLGLSYRVI 316
>gi|456387036|gb|EMF52549.1| serS protein [Streptomyces bottropensis ATCC 25435]
Length = 425
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L++ + LK + + + E + + N+ HPDVPVGGE+ +
Sbjct: 61 KASAEEKAELLKRAEQLKADVKAADAERDAAATETHELLLQLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVG---NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G + +V F KDH +LG L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGEIRDFTVEGFEPKDHLELGTILGAIDTERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEIIDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLDWEKQWLTSLELPFRVI 319
>gi|262183297|ref|ZP_06042718.1| seryl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 420
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 182/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V A+ NR + +L + +L E+ + D+LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDVVRASQVNRGEDPSLVDQLLAADEQRRAAIVKADQLRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LKE + E+ ++ + + N+ P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKEKVKAAGEEAAAAEAKVTELQYQLSNVVE-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG+ L + D A+V G++FYYL + L++G++
Sbjct: 120 LEEVGEKPQFDFEPKDHLELGETLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR V++ GF + ++ ++Y + D L+GT+E+ + G H +
Sbjct: 180 KAREAGFKLMIPPVLVRPDVMQGTGFLGQHSD-EIYYLPADDLYLVGTSEVALAGYHKEE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE+++ H++L+
Sbjct: 239 IIDLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEMHQKLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+D+ ++ L ++ +
Sbjct: 299 NMEKDMLEAMELSYRTI 315
>gi|421744738|ref|ZP_16182690.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
gi|406686853|gb|EKC90922.1| seryl-tRNA synthetase [Streptomyces sp. SM8]
Length = 410
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 180/312 (57%), Gaps = 14/312 (4%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ ++ K+ K E+ +L++
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRSEQKSL-GKLIPKATGDEKTELLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCI----PNMTHPDVPVGGE-DCSIIRK--TVG 198
+ L + + + DE QEA+ + N+ HPDVPVGGE D +++ K T+
Sbjct: 60 KAGELSAAVKAADAE----KDEADQEAKQLLLRLGNIVHPDVPVGGEEDFAVLAKHGTIR 115
Query: 199 NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR 258
+ + F +DH +LG+AL D + AA+VSGS+FYYL +LE+ L+N +++
Sbjct: 116 DFAAEGFEPRDHLELGEALGAIDVERAAKVSGSRFYYLTGVGALLELALVNAAIAQATAA 175
Query: 259 GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSES 318
GFTP+ TP +VR +E GF + A VY +E D L+GT+E+P+ HMD I+
Sbjct: 176 GFTPMLTPALVRPRAMEGTGFLGQAAE-DVYHLEKDDFYLVGTSEVPLAAYHMDEIIEAD 234
Query: 319 LLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEED 378
LPL+YA FS CFR EAG G TRG++RVHQF K+EMF + +PE++++ H+ L+ E
Sbjct: 235 KLPLRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVEPEDAEAEHQRLLDWEIQ 294
Query: 379 LYSSLGLHFKLL 390
SL L F+++
Sbjct: 295 WLQSLELPFQVI 306
>gi|326384326|ref|ZP_08206007.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326196924|gb|EGD54117.1| seryl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 417
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 185/318 (58%), Gaps = 7/318 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + L + +L+ + E D LR E+ ++ K+ G
Sbjct: 2 IDLKIVRENPDLVRASQRARGEDPGLVDQLLDADAARRSAISEADALRTEQKSL-GKLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK+L + + K Q + I N+ + P GGED I+
Sbjct: 61 KASGDEKAALLAKGKDLADQVKAAVAKQNKADAASQAAHRAISNII-TEAPAGGEDDYIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P+ + P KDH +LG++L + D +VSGS+FY+L ML++GL+N +
Sbjct: 120 LEHVGEPTAIDDP-KDHLELGESLGLIDMARGVKVSGSRFYFLTGLGAMLQLGLLNMAAA 178
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT + P +V+ ++ GF GA++ ++Y ++ D L+GT+E+P+ G H D
Sbjct: 179 KATANGFTLMIPPVLVKPEIMGGTGFL--GAHSDEIYHLDDDDLYLVGTSEVPLAGYHKD 236
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ +
Sbjct: 237 EILDLSNGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQRI 296
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 297 LGWEKDMLAAIDVPYRVI 314
>gi|452992032|emb|CCQ96575.1| Serine--tRNA ligase [Clostridium ultunense Esp]
Length = 420
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 181/319 (56%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +IR+N + + RN+ + +++ ++ + + + + V+RL++ERNA +K+
Sbjct: 2 LDISFIRENVDLIKETARNKGVDVDVDRLVLVDGRRRELIQSVERLQQERNA-NSKLVKS 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+ E+ +LIE K + + + LE +L K+ E Q+ +PN PD PVG +D +
Sbjct: 61 AKGEEKDRLIERTKGINQQIKELETELEKVMTEYQELMLRVPNPPTPDTPVGEDDSDNVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P F F ++H +L + + D + +V+GS+ YYL N+ +L +I + L
Sbjct: 121 VKRVGEPPQFPFTPRNHVELMEMHRMVDIERGVKVAGSRSYYLINDGALLHRAVIQFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ K+GFTP+ P +V + G+ P GA Q Y +E D+ L+GTAE+ + H
Sbjct: 181 QLGKKGFTPMVVPVLVNEMALVGTGYFPLGAE-QTYHVEKEDKYLVGTAEVSLASYHYGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ--PEESDSYHEE 371
IL+E LP +YA S CFR E G+AG GLYRVHQFSK+E + C+ EES H E
Sbjct: 240 ILTEGELPKRYAGVSDCFRREVGSAGRDVFGLYRVHQFSKVEQVIICRNDEEESKRLHYE 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L++ E++ L L ++++
Sbjct: 300 LLQNAEEILQGLELPYRVV 318
>gi|452844189|gb|EME46123.1| hypothetical protein DOTSEDRAFT_78508 [Dothistroma septosporum
NZE10]
Length = 509
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 188/370 (50%), Gaps = 38/370 (10%)
Query: 55 TIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKML 111
TI N+ A KP ID K IR N N +RN N +LEL+EK++
Sbjct: 25 TIKRWYNRPSFAPKP----VIDLKHIRQNPGLYEQNCVDRNYAPHARNGWRILELHEKVV 80
Query: 112 NVQKEVDRLREERNAVANKM-----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTD 166
Q++ +LR+ NA+ ++ + ++ R L+EE K LK+ L + E K
Sbjct: 81 EQQRQAVQLRQRNNAIGKEVGRQAAQKDVDQDSRSTLLEEAKALKQDLASFEVMEKKAQA 140
Query: 167 ELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAA 226
E+ + A +PN++ PVG E + G + K H +GK LDI DF+A+A
Sbjct: 141 EMDRLALELPNLSSLSTPVGEEPHILEVINEGLDWSRSRLSKSHVDIGKELDILDFEASA 200
Query: 227 EVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN- 285
SG +Y+LKNE +LE LI + LS +KRGF +T P +V S + CGF PR N
Sbjct: 201 TTSGWGWYFLKNEGALLEQALIQYALSVAMKRGFKVVTPPSLVYSHIASACGFMPRDQNG 260
Query: 286 -TQVYSI---------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEA 335
TQ+Y+I E L GTAEIP G + L + LPLK S C+R EA
Sbjct: 261 ETQIYNIAQHEHDASGEKPGMVLAGTAEIPFAGSQANKTLQAADLPLKVVGPSRCYRAEA 320
Query: 336 GAAGTATRGLYRVHQFSKLEMFVFCQPE---------------ESDSYHEELIRIEEDLY 380
GA G T+GLYRVH+F+K+EMF + P +++ +++ I++++
Sbjct: 321 GARGVDTKGLYRVHEFTKVEMFAWTLPSVDPDSERFSDDEGSVQAEEAFADMLDIQKEIV 380
Query: 381 SSLGLHFKLL 390
+LGLH K+L
Sbjct: 381 IALGLHAKVL 390
>gi|119577252|gb|EAW56848.1| seryl-tRNA synthetase 2, isoform CRA_d [Homo sapiens]
Length = 518
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 179/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K MF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKAGMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|408404385|ref|YP_006862368.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364981|gb|AFU58711.1| serine--tRNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 426
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 184/329 (55%), Gaps = 20/329 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERN----AVAN 129
+D K +++N +AV + RN +N L+ ++ + + + E LR+++N A+A
Sbjct: 2 LDPKLLKENPQAVKDMLNRRNMANFPLDELVTIDRRRRELIVETQELRQKKNVLAEAIAR 61
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE- 188
K K K + S + + K + L EE+LVK ++ +PNM H VP G +
Sbjct: 62 KKKAKQDASSE---LAQMKEVSSYLGDSEEELVKTEGRFKELMMVVPNMLHESVPTGKDE 118
Query: 189 -DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D ++R+ G+ NF KDH + ALD+ D + AA+VSG++FYYLKNE V + L
Sbjct: 119 KDNVVVRQN-GSAKKMNFAPKDHVDIAAALDLVDVERAAKVSGARFYYLKNELVKMNQAL 177
Query: 248 INWTLSEVIKRGFTPLTTPEIVR----SSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+N+ L + + + + P ++R S V FQ +Y +EG D +IGT+E
Sbjct: 178 VNFALDFLSEHSYILVQPPYMIRRESMSGAVILGDFQ-----DVIYKVEGEDLYMIGTSE 232
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ +HMD IL LP++YA +S CFR EAGA G +G++RVHQF K+E FV+C+PE
Sbjct: 233 HAIASMHMDEILDGKKLPIRYAGYSPCFRKEAGAHGKDMKGIFRVHQFEKVEQFVYCRPE 292
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLLLF 392
+S HE ++ + E+ Y+ LG+ +++L
Sbjct: 293 DSWKEHERMLALSEEFYNRLGIPNRVMLL 321
>gi|345016369|ref|YP_004818723.1| seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
gi|344042718|gb|AEM88443.1| Seryl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
Length = 412
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 177/308 (57%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + + + +L E+ + D LR E+ A+ K+ K E+ +L++
Sbjct: 1 MRASQRARGEDVGIVDALLTADERRRSSSVRFDELRAEQKAL-GKLIPKASGDEKAELLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN- 204
+ L + + + +E QQ + N+ HP+VPVGGED + +T+G P F+
Sbjct: 60 KAGELSAAVKAADAEQDAAAEETQQLLLQLGNLVHPEVPVGGEDDFAVLETIGTPRDFDA 119
Query: 205 --FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG+ L D + A+VSGS+FYYL +LE L+N +++ GFTP
Sbjct: 120 EGFAPKDHLELGELLGAIDTERGAKVSGSRFYYLTGIGALLEFALVNAAMAQATAAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +V+ +E GF + A VY ++ D L+GT+E+P+ HMD IL LP
Sbjct: 180 VLTPALVKPKAMEGTGFLGQAAE-DVYHLDKDDLYLVGTSEVPLAAYHMDEILEADALPR 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG+ G TRG++RVHQF K+EM+V+ PE++++ H+ L+ E+ +S
Sbjct: 239 RYAGFSSCFRREAGSYGKDTRGIFRVHQFDKVEMYVYTTPEDAEAEHQRLLDWEKQWLTS 298
Query: 383 LGLHFKLL 390
L L F+++
Sbjct: 299 LELPFRVV 306
>gi|108801992|ref|YP_642189.1| seryl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119871144|ref|YP_941096.1| seryl-tRNA synthetase [Mycobacterium sp. KMS]
gi|123177925|sp|Q1B1V1.1|SYS_MYCSS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222749|sp|A1UN98.1|SYS_MYCSK RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|108772411|gb|ABG11133.1| seryl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119697233|gb|ABL94306.1| seryl-tRNA synthetase [Mycobacterium sp. KMS]
Length = 417
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 177/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R+R + A ++ +L+ D LR E+ A + K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRSRGEDPALVDALLDADAARRAAVSAADNLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ + K L E + E I N+ VP GGEDC +
Sbjct: 61 KASPEERPALLTQAKELAEQVKAAEAAQADADRTFTAAHMAISNVVIEGVPAGGEDCFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P + P KDH +LG+AL + D + A+V+GS+FY+L +L++GL+ +
Sbjct: 121 LDVVGEPRAIDDP-KDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLMQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LATDNGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRLESDDMYLVGTSEVPLAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++ + H+ L+
Sbjct: 239 IIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAEHDRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 GWQREMLALIEVPYRVI 315
>gi|294630258|ref|ZP_06708818.1| seryl-tRNA synthetase [Streptomyces sp. e14]
gi|292833591|gb|EFF91940.1| seryl-tRNA synthetase [Streptomyces sp. e14]
Length = 425
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + A+ R R + L + +L E+ + D LR E+ A+ K+
Sbjct: 2 IDLRLLREDPDRARASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKAL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KASGDEKAELLKKASQLAADVKAADAERDAADAETQELLLQLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F+ F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGTIRDFDAEGFAPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PEES H
Sbjct: 240 MDEIIDAERLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVTPEESQEEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|170780874|ref|YP_001709206.1| seryl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189083563|sp|B0RCF1.1|SYS_CLAMS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169155442|emb|CAQ00549.1| seryl-tRNA synthase [Clavibacter michiganensis subsp. sepedonicus]
Length = 426
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 183/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
ID + +RD+ + V A+ R ++ + + V E+ + E + LR E+NA K+
Sbjct: 2 IDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRQAI-TEFEGLRAEQNA-HGKLV 59
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
K + +++ +LI E + LK + +E + L + + IPN+ VP GGED
Sbjct: 60 AKADKADKPRLIAEVQELKARVTAAQERAQQAEAALDEAMRRIPNIVIDGVPAGGEDDWA 119
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + VG + F+F +DH ++G+ LD D A+VSG++F++LK LE+ L+N+ L
Sbjct: 120 LLREVGEKAAFDFEPRDHLEIGEILDAIDMGRGAKVSGARFHFLKGIGARLEIALMNFGL 179
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ G PL TP +V+ ++ GF A+ +VY ++ D L GT+E+ + G H D
Sbjct: 180 ARALEAGLVPLITPTLVKPEIMAGTGFLGAHAD-EVYHLDDDDLYLTGTSEVALAGYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P++YA +S C+R EAG+ G TRG+ RVHQF KLEMF + P ++++ HE L
Sbjct: 239 EILDLAAGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ ++E + LGL ++++
Sbjct: 299 LAMQERMMQDLGLAYRVI 316
>gi|359770599|ref|ZP_09274072.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
gi|359312283|dbj|GAB16850.1| seryl-tRNA synthetase [Gordonia effusa NBRC 100432]
Length = 418
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 184/319 (57%), Gaps = 8/319 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + L +++L+ + E D LR E+ + ++ G
Sbjct: 2 IDLKILRENPDLVRQSQRTRGEDPGLVDVLLDADATRRSSIVEADALRSEQKTLGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E + + D +Q + I N+ P GGED ++
Sbjct: 61 KSSGDEKAALLAKGKELAEQVKAAVARQNQAEDAAEQAQRSISNIVQDGAPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFP-VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ VG P + P +DH ++G+AL + D + A+VSGS+FY+L ML++GL+N
Sbjct: 121 LEHVGEPR--DIPNARDHLEIGEALGLLDMERGAKVSGSRFYFLTGLGAMLQLGLLNMAA 178
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHM 311
++ GFT + P +VR ++ GF GA++ ++Y + D L+GT+E+P+ G H
Sbjct: 179 AKATANGFTLMIPPVLVRPEIMAGTGFL--GAHSDEIYHLADDDLYLVGTSEVPLAGYHS 236
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++D+ H +
Sbjct: 237 NEILDLSTGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDADAEHLK 296
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E+++ +++ + ++++
Sbjct: 297 LLNWEKEMLAAIDVPYRVI 315
>gi|441522133|ref|ZP_21003787.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
gi|441458353|dbj|GAC61748.1| seryl-tRNA synthetase [Gordonia sihwensis NBRC 108236]
Length = 417
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 187/322 (58%), Gaps = 15/322 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + L + +LE + E D LR E+ ++ K+ G
Sbjct: 2 IDLKIVRENPDLVRASQRARGEDPGLVDQLLEADAARRSAIAEADALRAEQKSL-GKLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGL---VTLEEDLVKLTDELQQEA-QCIPNMTHPDVPVGGED 189
K E+ L+ +GK L E + V + D D Q A + I N+ D P GGED
Sbjct: 61 KASGDEKTALLAKGKELAEQVKAAVAKQND----ADSASQAAHRAISNII-TDAPAGGED 115
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + VG P + P KDH +LG++L + D +VSGS+FY+L ML++GL+N
Sbjct: 116 DYLVLEHVGEPRAIDDP-KDHLELGESLGLIDMARGVKVSGSRFYFLTGLGAMLQLGLLN 174
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
++ GFT + P +V+ ++ GF GA++ ++Y ++ D L+GT+E+P+ G
Sbjct: 175 MAAAKATANGFTLMIPPVLVKPEIMGGTGFL--GAHSDEIYHLDEDDLYLVGTSEVPLAG 232
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++
Sbjct: 233 YHKDEILDLSGGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAE 292
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H+ ++ E+D+ +++ + ++++
Sbjct: 293 HQRILGWEKDMLAAIDVPYRVI 314
>gi|448822824|ref|YP_007415987.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7111]
gi|448276321|gb|AGE35745.1| seryl-tRNA synthetase [Corynebacterium urealyticum DSM 7111]
Length = 422
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 181/320 (56%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + A ++ +LE + D+ R E+ A + M
Sbjct: 2 IDLKLLRENPDLVRESQRTRGEDPALVDQLLEADRQRREAISAADQARAEQKAFSKAMGQ 61
Query: 134 KLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K+ + E+ +L EEGK + + LE L I N+ P GGE+
Sbjct: 62 KMAAASDEEKTQLREEGKQKAQAVKDLEATQSAAEQALHDLQMQISNVVE-GAPAGGEED 120
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + VG P+ F+F KDH +LG++L + D +VSGS+FY+L + +L++G++
Sbjct: 121 FVVLEHVGEPTTFDFEPKDHLELGESLGLIDMKRGTKVSGSRFYFLTGDGALLQLGMMQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++GF + P +VR V+ GF A+ +VY +E D L+GT+E+ + G H
Sbjct: 181 AARKATEKGFQLMIPPVLVRPEVMGGTGFLGAHAD-EVYRLEEDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ P +YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE++ H+
Sbjct: 240 SDEIIDLDE-PKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKLEMFVYCRPEQATEIHQ 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
EL+++E+D+ +++ + ++++
Sbjct: 299 ELLQLEKDMLAAIDVPYRVI 318
>gi|342879763|gb|EGU80999.1| hypothetical protein FOXB_08474 [Fusarium oxysporum Fo5176]
Length = 499
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 34/351 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANI--RN-RNSNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR + E RN RN N +LEL+ + ++Q++ LRE N +
Sbjct: 36 KPIVDIKHIRQHAELYQQTCVERNYRNQAQNPAKILELHARWQDLQRQGRALRERSNLLR 95
Query: 129 NKMKGKLEPSE-----------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++ S+ R+++ EE + LK+ L +E+ + ++++ A +PN
Sbjct: 96 RQLANPATSSDDEDLKEVRQLTREQIQEEARQLKQDLSAIEKGESQAVTQMEELALELPN 155
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD-----HFQLGKALDIFDFDAAAEVSGSK 232
+THPD P G D ++ + +P F +D H +G L IFDF AA SG
Sbjct: 156 LTHPDTP-KGSDFEVM-SYINDPPTFKESPEDKIWRSHVHIGSELGIFDFAGAATASGWG 213
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYS 290
+YYL EA LE L+ + L+ + G+T ++ P +V S + CGFQPR N QVY+
Sbjct: 214 WYYLLGEAAQLEQALVQYALAVATRHGWTQVSPPSMVYSHIGAACGFQPRDLNGEQQVYT 273
Query: 291 I----EGADQ-----CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
I E A++ CL GT+EI + G+ ++ L LPLK A S C+R EAGA G
Sbjct: 274 IAQSAEDAERGVPEMCLTGTSEIALAGMKANTTLDSEDLPLKRVAVSRCYRAEAGARGAD 333
Query: 342 TRGLYRVHQFSKLEMFVFCQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+EMF + P+E + +E++ ++ ++ SSLGL+ ++L
Sbjct: 334 TKGLYRVHEFTKVEMFAWTAPDEDVAQELFDEMLDLQTEILSSLGLYCRIL 384
>gi|296268069|ref|YP_003650701.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296090856|gb|ADG86808.1| seryl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 421
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 8/303 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + + A+ R R + + + +L L E+ + LR E+ + +
Sbjct: 2 IDLRTLREDPDRLRASQRARGEDETVVDRLLSLDERRRTALTRFESLRAEQKRLGKSVS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ERQ L++ K L + E + L EL + +PN+ P GGED ++
Sbjct: 61 RASGDERQALLDRAKELAAEVKAAEAEAEALGQELDELLMTVPNIVEEGAPQGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P F+F +DH +LG+ L D D A+VSG++FYYL L GL+ +
Sbjct: 121 LEHVGEPPTFDFTPRDHVELGELLGAIDIDRGAKVSGARFYYLTGAGARLVHGLLTMAMH 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GFTP+ P +V+ + GF GA++ +VY +E D L+GT+E+ + H D
Sbjct: 181 QAIEAGFTPVIPPVLVKPEAMAGTGFL--GAHSAEVYRLEADDLYLVGTSEVSLAAYHAD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + LPL+YA +S CFR EAG+ G TRG+ RVHQF K+EMF FC+PE++ HEE
Sbjct: 239 EILDAAALPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSFCRPEDA---HEEH 295
Query: 373 IRI 375
+R+
Sbjct: 296 LRL 298
>gi|281344092|gb|EFB19676.1| hypothetical protein PANDA_017222 [Ailuropoda melanoleuca]
Length = 522
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 176/306 (57%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ +++++ +++++ RL EE+ AVA ++ L + + Q L G+
Sbjct: 85 DLPAIISMWQELRQLREQIRRLEEEKGAVAEAVRALLVNRDSSQVQQDPQYQSLRAHGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L+ L +L + A +PN THPDVP+G E + + + VG+ F+F +
Sbjct: 145 IRKQLMVLYPKETQLEEHFYLRALRLPNRTHPDVPIGDESQARVLQVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|301784061|ref|XP_002927448.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 487
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 176/306 (57%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ +++++ +++++ RL EE+ AVA ++ L + + Q L G+
Sbjct: 85 DLPAIISMWQELRQLREQIRRLEEEKGAVAEAVRALLVNRDSSQVQQDPQYQSLRAHGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L+ L +L + A +PN THPDVP+G E + + + VG+ F+F +
Sbjct: 145 IRKQLMVLYPKETQLEEHFYLRALRLPNRTHPDVPIGDESQARVLQVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|119577249|gb|EAW56845.1| seryl-tRNA synthetase 2, isoform CRA_b [Homo sapiens]
Length = 539
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 179/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K MF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKAGMFGVTGPGLEQSSQLLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|145221742|ref|YP_001132420.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|145214228|gb|ABP43632.1| seryl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
Length = 445
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ + R + +L + + E D LR E+ + A+K G
Sbjct: 28 IDPKVLRENPDAVRASQQARGEDPSLVDALAEADSARRAAISAADNLRAEQKS-ASKAIG 86
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + E D I N+ VP GGED ++
Sbjct: 87 KASPDERPALLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGEDDFVV 146
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P V KDH +LG+AL + D + A+VSGS+FY+L +L++GL +
Sbjct: 147 LDTVGEPRVIP-DAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVR 205
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF A+ ++Y + D L+GT+E+P+ G H D
Sbjct: 206 TATENGFTLMIPPVLVRPEIMRGTGFLGAHAD-EIYHLAEDDLYLVGTSEVPLAGYHSDE 264
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ H+ L+
Sbjct: 265 ILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEHDRLL 324
Query: 374 RIEEDLYSSLGLHFKLL 390
+ L +++ + ++++
Sbjct: 325 GWQRQLLAAIEVPYRVI 341
>gi|357391001|ref|YP_004905842.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
gi|311897478|dbj|BAJ29886.1| putative seryl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 426
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ E V ++ R+R + +L + +L E+ D LR E+ + K+
Sbjct: 2 IDLRLLRDDPERVRSSQRSRGEDVDLVDALLSADERRRASGTRFDELRAEQKQL-GKLVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+ L+ K L + + + +E ++ + + N+ P PVGGE+ +
Sbjct: 61 AAKGEEKAALLARTKELAAEVKAADTAQGEAKEEAERLQRALANLIDPAAPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F F +DH +LG+ L D + A+V+G++ YYL +LE+ L+N
Sbjct: 121 LEEVGTPRDFAAEGFEPRDHVELGRLLGAIDTERGAKVAGARSYYLTGPGALLELALVNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + ++ GF + A VY + D+ L+GT+E+P+ H
Sbjct: 181 AMAQAGAAGFTPMITPALVRPAAMDGTGFLGQAAE-NVYYLADDDRYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG G TRG+ RVHQF K+EMFVF PE++++ H
Sbjct: 240 MDEILDADKLPLRYAGFSSCFRREAGTYGKDTRGIIRVHQFEKVEMFVFTTPEDAEAEHR 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L++ E+D ++L L ++++
Sbjct: 300 RLLQWEKDFLNALELPYRVI 319
>gi|297625341|ref|YP_003687104.1| seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921106|emb|CBL55653.1| Seryl-tRNA synthetase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 424
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + + V + R R + L + L E + ++ R E+ ++ +
Sbjct: 2 IDPKLLRTDPDRVRRSQRARGESVELVDQALAADEARRSSISAFEQARAEQKSL-GALIA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ K L + L+ + + + + N+ DVP GGED +
Sbjct: 61 KASGDERNALLSRTKELAAKVRELDASAHEADEHYTEVVKQFGNIVFEDVPEGGEDDLFV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
T G P F ++DH +LG+ LD D + A+VSGS+FYYLK MLE LI +
Sbjct: 121 IDTEGTPRDFAGEGITIRDHLELGEMLDAIDMERGAKVSGSRFYYLKGPGAMLEFALIQF 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + ++ G TP+ P +V + +E GF + A+ VY +E +Q L+GTAE+P+ H
Sbjct: 181 ALHKALEWGLTPMIPPALVNPAAMEGTGFLGQAAD-DVYYLERDNQYLVGTAEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LPL+YA FS +R EAG+ G TRG++RVH F K EMF +C+PE++ + HE
Sbjct: 240 SDEILDSKELPLRYAGFSPAYRREAGSYGKDTRGIFRVHWFDKFEMFTYCRPEDAVAEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E++ S+LG+ F++L
Sbjct: 300 RLLAHEKEFISALGIPFEVL 319
>gi|419420097|ref|ZP_13960326.1| seryl-tRNA synthetase [Propionibacterium acnes PRP-38]
gi|422394496|ref|ZP_16474537.1| serine--tRNA ligase [Propionibacterium acnes HL097PA1]
gi|422437309|ref|ZP_16514156.1| seryl-tRNA synthetase [Propionibacterium acnes HL092PA1]
gi|422492731|ref|ZP_16569036.1| seryl-tRNA synthetase [Propionibacterium acnes HL086PA1]
gi|422514980|ref|ZP_16591098.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA2]
gi|422523921|ref|ZP_16599932.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA2]
gi|422530308|ref|ZP_16606269.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA1]
gi|422544329|ref|ZP_16620169.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA1]
gi|313794154|gb|EFS42174.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA1]
gi|313803276|gb|EFS44472.1| seryl-tRNA synthetase [Propionibacterium acnes HL110PA2]
gi|313839192|gb|EFS76906.1| seryl-tRNA synthetase [Propionibacterium acnes HL086PA1]
gi|314964050|gb|EFT08150.1| seryl-tRNA synthetase [Propionibacterium acnes HL082PA1]
gi|315078297|gb|EFT50336.1| seryl-tRNA synthetase [Propionibacterium acnes HL053PA2]
gi|327334394|gb|EGE76105.1| serine--tRNA ligase [Propionibacterium acnes HL097PA1]
gi|327457587|gb|EGF04242.1| seryl-tRNA synthetase [Propionibacterium acnes HL092PA1]
gi|379978471|gb|EIA11795.1| seryl-tRNA synthetase [Propionibacterium acnes PRP-38]
Length = 424
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 180/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLSRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++TVG P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETVGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GF P+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFIPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL + LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C P+E++++HE
Sbjct: 240 SDEILDDVELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPQEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALQIPFQVL 319
>gi|126437973|ref|YP_001073664.1| seryl-tRNA synthetase [Mycobacterium sp. JLS]
gi|166222748|sp|A3Q7P6.1|SYS_MYCSJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|126237773|gb|ABO01174.1| seryl-tRNA synthetase [Mycobacterium sp. JLS]
Length = 417
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 176/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R+R + A ++ +L+ D LR E+ A + K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRSRGEDPALVDALLDADAARRAAVSAADNLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + E I N+ VP GGEDC +
Sbjct: 61 KASPEERPALLTRAKELAEQVKAAEAAQADADRTFTAAHMAISNVVIEGVPAGGEDCFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P + P KDH +LG+AL + D + A+V+GS+FY+L +L++GL+ +
Sbjct: 121 LDVVGEPRAIDDP-KDHLELGEALGLIDMERGAKVAGSRFYFLTGRGALLQLGLMQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LATDNGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRLESDDMYLVGTSEVPLAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++ + H+ L+
Sbjct: 239 IIDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAAAEHDRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 GWQREMLALIEVPYRVI 315
>gi|418246070|ref|ZP_12872467.1| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 14067]
gi|354509615|gb|EHE82547.1| seryl-tRNA synthetase [Corynebacterium glutamicum ATCC 14067]
Length = 422
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 180/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + V + R + L + ++ E K D LR E+ A K+ G
Sbjct: 2 IDLKFLRDNPDVVRVSQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E ++ + + N+ P GGED ++
Sbjct: 61 QASPEDRPALLEGSNELKAKVKDAEAAQEAAEAKVNELQMKLSNVVS-GAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T+G P F+F KDH +LG++L + D +VSG++FYYL + ML++G++
Sbjct: 120 LETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFYYLTGDGAMLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF+ + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KAREAGFSMMIPPVLVRPEIMAGTGFLGDHSE-EIYYLERDDMYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE+++ H++L+
Sbjct: 239 IIDLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDVHQQLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E+++ +++ + ++++
Sbjct: 299 GMEKEMLAAIEVPYRVI 315
>gi|315446522|ref|YP_004079401.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
gi|315264825|gb|ADU01567.1| seryl-tRNA synthetase [Mycobacterium gilvum Spyr1]
Length = 419
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 174/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ + R + L + + E D LR E+ + A+K G
Sbjct: 2 IDPKVLRENPDAVRASQQARGEDPGLVDALAEADSARRAAISAADNLRAEQKS-ASKAIG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + E D I N+ VP GGED ++
Sbjct: 61 KASPDERPALLAAAKELSEKVKAAEADQAAAEAAYTAAHMAISNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P V KDH +LG+AL + D + A+VSGS+FY+L +L++GL +
Sbjct: 121 LDTVGEPRVIP-DAKDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF A+ ++Y + D L+GT+E+P+ G H D
Sbjct: 180 TATENGFTLMIPPVLVRPEIMRGTGFLGAHAD-EIYHLAEDDLYLVGTSEVPLAGYHSDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ H+ L+
Sbjct: 239 ILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEHDRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ L +++ + ++++
Sbjct: 299 GWQRQLLAAIEVPYRVI 315
>gi|407641279|ref|YP_006805038.1| seryl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
gi|407304163|gb|AFT98063.1| seryl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
Length = 420
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 179/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +++RDN +AV A+ R R + L + +LE D LR E A+ K+ G
Sbjct: 2 IDLRFLRDNPDAVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEHKAM-GKVIG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ + + + + + E +L + I N+ P GGED ++
Sbjct: 61 KASKEERPALLAQAQEMSQQVKDAEVAQNAADADLDAAQRAISNVVQEGAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T+G P F+F KDH LG AL +FD + A+VSG++FY++ +L++GL+
Sbjct: 121 LETIGKPKEFDFEPKDHVALGDALGLFDMERGAKVSGARFYFMTGYGALLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF + + +VY +E D L+GT+E+P+ G H D
Sbjct: 181 RAVANGFTMMIPPVLVRPEIMAGTGFLGQ-HSAEVYHLEEDDLYLVGTSEVPLAGYHSDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFVF PE++D+ H+ L+
Sbjct: 240 ILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKIEMFVFTTPEQADAEHKRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+D+ +++ + ++++
Sbjct: 300 AWEQDMLAAVEVPYRVI 316
>gi|395205979|ref|ZP_10396610.1| serine--tRNA ligase [Propionibacterium humerusii P08]
gi|422440877|ref|ZP_16517690.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|422472003|ref|ZP_16548491.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|422572767|ref|ZP_16648334.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|313836482|gb|EFS74196.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA2]
gi|314928937|gb|EFS92768.1| seryl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|314971072|gb|EFT15170.1| seryl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|328906615|gb|EGG26390.1| serine--tRNA ligase [Propionibacterium humerusii P08]
Length = 424
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 181/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + + V + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDTVRRSQVARGEDPSIVDNVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED I
Sbjct: 61 KASGDEKAELLTRTKTISGEVADLKKAADEADAKFTELAKTLGNIVIDGVPAGGEDEGAI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++T+G P F F KDH ++G+AL D + ++SGS+FY L LE+ L+N
Sbjct: 121 KETIGTPRDFAAEGFKPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLELALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C PEE++++HE
Sbjct: 240 SEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPEEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALEIPFQVL 319
>gi|397482159|ref|XP_003812300.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 2 [Pan
paniscus]
Length = 518
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 104 LELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEGKNLKEGL 154
+ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G+ +++ L
Sbjct: 90 ISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARGREIRKEL 149
Query: 155 VTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLG 214
V L +L ++ +A +PN THPDVPVG E + + VG+ VF+F + H ++G
Sbjct: 150 VHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSFQPRGHLEIG 209
Query: 215 KALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVV 274
+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+++R +V
Sbjct: 210 EKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVF 269
Query: 275 EKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCF 331
E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++ S C+
Sbjct: 270 EGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCY 329
Query: 332 RTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKL 389
R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++
Sbjct: 330 RAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRV 388
Query: 390 L 390
L
Sbjct: 389 L 389
>gi|417932128|ref|ZP_12575477.1| serine--tRNA ligase [Propionibacterium acnes SK182B-JCVI]
gi|340774738|gb|EGR97213.1| serine--tRNA ligase [Propionibacterium acnes SK182B-JCVI]
Length = 424
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R + +AV + R + ++ + V+ E + LR E+ + ++
Sbjct: 2 IDPKLLRTDPDAVRRSQVARGEDPSVVDDVVAADEARREAIAAHENLRAEQKGLGKRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+ K + + L++ + + + A+ + N+ VP GGED +I
Sbjct: 61 KASGDEKAELLTRTKMISGEVADLKKAADEADVKFTELAKTLGNIVIDGVPAGGEDEGVI 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++T+G P F F KDH ++G+AL D + ++SGS+FY L LE L+N
Sbjct: 121 KETIGTPRDFAAEGFEPKDHLEIGEALGAIDMERGTKISGSRFYVLTGVGAQLEFALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+S+ + GFTP+ P +V+ S +E GF + A+ VY + DQ L+GT+E+ + H
Sbjct: 181 AMSKAAQWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQYLVGTSEVALAAFH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL ++ LP +Y AFS C+R EAG+ G TRG++RVH F K+EMFV+C PEE++++HE
Sbjct: 240 SEEILDDAELPKRYVAFSPCYRREAGSYGKDTRGIFRVHWFDKVEMFVYCLPEEAEAWHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E+D ++L + F++L
Sbjct: 300 KLLSFEKDFITALEVPFQVL 319
>gi|194377936|dbj|BAG63331.1| unnamed protein product [Homo sapiens]
Length = 518
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 176/301 (58%), Gaps = 15/301 (4%)
Query: 104 LELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEGKNLKEGL 154
+ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G+ +++ L
Sbjct: 90 ISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARGREIRKEL 149
Query: 155 VTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLG 214
V L +L ++ +A +PN THPDVPVG E + + VG+ VF+F + H ++G
Sbjct: 150 VHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQPRGHLEIG 209
Query: 215 KALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVV 274
+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+++R +V
Sbjct: 210 EKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVF 269
Query: 275 EKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCF 331
E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++ S C+
Sbjct: 270 EGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCY 329
Query: 332 RTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKL 389
R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++
Sbjct: 330 RAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRV 388
Query: 390 L 390
L
Sbjct: 389 L 389
>gi|119577248|gb|EAW56844.1| seryl-tRNA synthetase 2, isoform CRA_a [Homo sapiens]
Length = 520
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 181/310 (58%), Gaps = 17/310 (5%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +Q+++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSK--LEMFVFCQP--EESDSYHEELIRIEEDLY 380
S C+R E G RGLYRVH F+K +EMF P E+S EE + ++ ++
Sbjct: 323 VCSSTCYRAETN-TGQEPRGLYRVHHFTKAGVEMFGVTGPGLEQSSQLLEEFLSLQMEIL 381
Query: 381 SSLGLHFKLL 390
+ LGLHF++L
Sbjct: 382 TELGLHFRVL 391
>gi|429220811|ref|YP_007182455.1| seryl-tRNA synthetase [Deinococcus peraridilitoris DSM 19664]
gi|429131674|gb|AFZ68689.1| seryl-tRNA synthetase [Deinococcus peraridilitoris DSM 19664]
Length = 419
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 181/317 (57%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N + V I ++ +L+ +L + ++L ++++++ L+ ERN A K+ K
Sbjct: 2 LDLKFIRENPQVVRRAIEVKHLALDLDHLLRVDSELLALRQKLEILQAERNGNA-KLVPK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
ER LI+ GK+L E + +E +L D L+ +P + P+G D +
Sbjct: 61 ASSDERPTLIQRGKDLAEEIKAMEPELRAHEDALKMLLLQVPQIPDERAPIGASDEDNVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G P F FP +DH QL + D + A VSGS+ Y LK +AV LE GLI++ L
Sbjct: 121 LRREGTPREFAFPPRDHLQLLELHGWADLERVARVSGSRSYLLKGDAVRLEQGLISFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +RGFT L+T +VR + G P G QVY IEG D L GTAE+PV ++ D
Sbjct: 181 FLEERGFTLLSTSALVRPETLVGTGHFP-GGEDQVYKIEGEDLMLAGTAEVPVNSLYADE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL LPL YAA S FR+EAG+AG RGL RVH+F K+E +V +PE++ ++ E ++
Sbjct: 240 ILGAGDLPLAYAALSGAFRSEAGSAGRDVRGLMRVHEFKKVEQYVLTRPEDAWTWFERIL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E L +L L ++++
Sbjct: 300 ANAEGLLRALELPYRVM 316
>gi|429201624|ref|ZP_19193076.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
gi|428662816|gb|EKX62220.1| serine--tRNA ligase [Streptomyces ipomoeae 91-03]
Length = 425
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ ++ K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKSL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + E QQ + N+ HPDVPVGGE+ +
Sbjct: 61 KASGDEKAELLKKASQLAADVKAADAERDAADAETQQLLLQLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F KDH +LG L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGEIRDFAAEGFEPKDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+ + H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVALAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+
Sbjct: 240 MDEILDADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L F+++
Sbjct: 300 RLLEWEKQWLTSLELPFRVI 319
>gi|27262200|gb|AAN87381.1| Seryl-tRNA synthetase [Heliobacillus mobilis]
Length = 424
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 186/318 (58%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R N + V ++NR +N +L+ LEL + ++ EV++L+ +RNAV+ ++ K
Sbjct: 2 LDTKFVRANPQVVEEALKNRGANLSLDDFLELDRRRRSILVEVEKLKAQRNAVSAEIARK 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ E + +I E + + + + L++ L ++ +++++ IPN+ H VPVG E+ ++
Sbjct: 62 KKAKEDAEAMILEMRQVGDQIKDLDDQLAQIEEDMEKLLYYIPNIPHASVPVGLSEEENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F+FPVK H+ LG+ LDI DF A+++G++F K LE +IN +
Sbjct: 122 EMRTWGTPESFDFPVKAHWDLGEELDILDFQRGAKITGARFTVYKGLGARLERAIINLMM 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+RG+T + P +V + G P+ A ++++ G + LI TAE+PV ++ +
Sbjct: 182 DTHAQRGYTEIFPPFMVNKQSMFGTGQLPKFAE-DMFAVSGTEYFLIPTAEVPVTNLYGN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F P+ S E+L
Sbjct: 241 EILEAEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTHPDHSYEELEKL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
E + LGL ++++
Sbjct: 301 TADAEHILQLLGLPYRVI 318
>gi|383809346|ref|ZP_09964866.1| serine--tRNA ligase [Rothia aeria F0474]
gi|383447698|gb|EID50675.1| serine--tRNA ligase [Rothia aeria F0474]
Length = 433
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N E A+ R R + A+++ +LE + LR E+NA ++
Sbjct: 2 IDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VP GGED ++
Sbjct: 61 KAPKEEKPSLVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVPTGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ + D A+VSGS+FY+LK + LE L+
Sbjct: 121 LKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATANGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL S P KY +S C+R EAGAAG TRG+ RVHQF+K EMFV+CQ E+++ HE
Sbjct: 240 MDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAEEIHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ +EE++ GL ++++
Sbjct: 300 QMRALEEEMLQKCGLAYRVI 319
>gi|406860921|gb|EKD13977.1| seryl-tRNA synthetase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 505
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 182/350 (52%), Gaps = 31/350 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERN--- 125
K +ID K IR N N RN E + L+E+ Q+E LRE N
Sbjct: 42 KVSIDIKHIRQNAALHENNCLGRNYKKQAEYPARINSLFERWHGYQREARSLRERNNRLK 101
Query: 126 -AVANKMKGKLEPSE---------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
+AN + E SE +Q++I+E K+LK L +EE+ LT ++ A I
Sbjct: 102 LQLANPTTLRDEESEDVRRIRQMTKQEIIDEAKSLKVQLSKIEEEESALTTQIDALAAAI 161
Query: 176 PNMTHPDVPVGGEDC---SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSK 232
PN+T + P G + I + +P+ + + H +G L++ DF AA SG
Sbjct: 162 PNLTSKETPQGNDPTVVGYINQHPESDPAASDRVWRSHVHIGTELNLLDFAGAATTSGWG 221
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYS 290
+YYL NEA LE L+ + L KRG+ ++ P +V S + CGFQPR N Q+Y+
Sbjct: 222 WYYLLNEAAQLEQALVQYALGVARKRGWGMVSPPSMVYSHIAAACGFQPRDQNGEQQIYN 281
Query: 291 IEGADQ--------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTAT 342
I+ L GTAEIP+ + ++IL E+ LP K S +R EAGA G T
Sbjct: 282 IQQNSSDVGRKPGLSLAGTAEIPLASMKANTILDEAELPAKRVGVSRSYRAEAGARGMDT 341
Query: 343 RGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+GLYRVH+F+K+EMF + +P E S + +E++ I+ ++ +SLGLH ++L
Sbjct: 342 KGLYRVHEFTKVEMFAWTKPSTEASVAVFDEMVSIQTEILTSLGLHCRIL 391
>gi|150865455|ref|XP_001384678.2| seryl-tRNA synthase-like protein [Scheffersomyces stipitis CBS
6054]
gi|149386711|gb|ABN66649.2| seryl-tRNA synthase-like protein [Scheffersomyces stipitis CBS
6054]
Length = 465
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 187/338 (55%), Gaps = 20/338 (5%)
Query: 65 VAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN----ANLELVLELYEKMLNVQKEVDRL 120
+ ++PQ +D + NKE ++IR R + L ++E K L + +++ L
Sbjct: 30 ILLRPQ----LDINGVITNKEEYESSIRRRMLSEEYLTGLNYIVENRPKQLELSQKISLL 85
Query: 121 REERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
R ERN + +MK S + +L ++KE L LE + LT+E+ + A+ +PN+
Sbjct: 86 RGERNVLGEQMKKGKSSSIKDRLT----SIKEELKPLEVEAKTLTEEIYRRAEMLPNLLD 141
Query: 181 PDVP---VGGEDCSIIRKTVGNPSVFNFPVK--DHFQLGKALDIFDFDAAAEVSGSKFYY 235
VP + + I ++ P DH +G+ L+I DF+ A+ VSGS +YY
Sbjct: 142 STVPKDTLVNDIVEFIHCDSEEDAMRKLPKTEFDHKLIGEKLNIMDFETASRVSGSSWYY 201
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--QVYSIEG 293
L + +LE L+ + LS+ +RG+ + P IVRS +V CGF+P+ N Q+Y +
Sbjct: 202 LIGDGALLEQALVQYGLSKARRRGYKMVIPPSIVRSEIVHACGFKPQDQNNEKQIYELID 261
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESL-LPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFS 352
++ L GTAEIP+G +H ++ S P+KYA S +R EAGA+G T+GLYRVH+F+
Sbjct: 262 ENRSLTGTAEIPLGALHSSTVFDTSTNFPIKYAGVSRSYRAEAGASGKDTKGLYRVHEFT 321
Query: 353 KLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
K+E+F F PE S EEL +++ ++ + LGL K+L
Sbjct: 322 KVELFHFTTPENSSQELEELRQLQTEIITELGLSAKVL 359
>gi|367054018|ref|XP_003657387.1| hypothetical protein THITE_2123017 [Thielavia terrestris NRRL 8126]
gi|347004653|gb|AEO71051.1| hypothetical protein THITE_2123017 [Thielavia terrestris NRRL 8126]
Length = 544
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 188/353 (53%), Gaps = 35/353 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVA 128
KA +D K IR N + + N R+RN +A + +L+ + Q+E LRE N +
Sbjct: 77 KAVLDLKHIRQNPDLYAQNCRDRNYHAAAAYPARINDLFSQWQAKQREGRALRERGNLLR 136
Query: 129 NKMKGKLEPSE--------------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ L + R++L+EE + +K L +E+ L E+Q+ A
Sbjct: 137 RQLADPLNSRDNADEEATAGFRSLSREQLLEEARKVKAELGAIEDAESALAAEMQRLALA 196
Query: 175 IPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV----KDHFQLGKALDIFDFDAAAEVSG 230
IPN+T P G D ++ +P P + H +G L I DF AA SG
Sbjct: 197 IPNLTSDATPRG-NDPLVLSYINDHPEPGPAPSDRVWRSHAHVGAELGILDFAGAATASG 255
Query: 231 SKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQV 288
+YYL +EA LE L+N+ L+ + G+ ++ P +V S + CGFQPR A+ TQ+
Sbjct: 256 WGWYYLLDEAAQLEQALVNYALTAATRAGWRQVSPPSMVYSHIAGACGFQPRDAHGETQI 315
Query: 289 YSIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAG 339
Y+I A + C+ GTAEIP+ G+ D++L E+ LP+K A S C+R EAGA G
Sbjct: 316 YTIAQAAEDAARGKPELCMAGTAEIPLAGMKADTVLDEADLPMKRVAASRCYRAEAGARG 375
Query: 340 TATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+E+F + P+ + + +EL+ ++ DL SLGLH ++L
Sbjct: 376 GETKGLYRVHEFTKVELFAWTAPDAAATADVFDELLDLQTDLLGSLGLHCRVL 428
>gi|451945359|ref|YP_007465995.1| seryl-tRNA ligase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904746|gb|AGF73633.1| seryl-tRNA ligase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 419
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 177/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R + L + ++ E + D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDVVRTSQVTRGEDPELVDQLIAADESRRRAIQSADELRAEQKAFGRKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE +++ + + N+ P GGED ++
Sbjct: 61 QASPEERPALLEGSNELKAKVKEAEEAQRTAEEKVTELQMKLSNIVE-GAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P+ F+F KDH LG++L + D +VSG++FYYL + L++G++
Sbjct: 120 LEHVGEPTRFDFEPKDHLDLGESLGLIDMKRGTKVSGARFYYLTGDGAFLQLGMLTLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR V+ GF ++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KAREAGFQLMIPPVLVRPEVMAGTGFLGEHSD-EIYYLERDDLYLVGTSEVALAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P++YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE++ H +L+
Sbjct: 239 IIDLSDGPVQYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCRPEDAQEQHRKLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E ++ S++ + ++++
Sbjct: 299 EMEREMLSAVEVPYRVI 315
>gi|197101139|ref|NP_001125074.1| seryl-tRNA synthetase, mitochondrial [Pongo abelii]
gi|55726880|emb|CAH90199.1| hypothetical protein [Pongo abelii]
Length = 518
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 179/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEG 147
+A+L ++ ++++ +++++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLREQIRSLEEEKAAVTEGVRALLANQDSGEVQQDPKYQGLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 REIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T ++++ RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLHRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHAVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGQEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQTEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|377561501|ref|ZP_09790952.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
gi|377521345|dbj|GAB36117.1| seryl-tRNA synthetase [Gordonia otitidis NBRC 100426]
Length = 426
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 183/318 (57%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L +++L+ + E D LR E+ A+ ++ G
Sbjct: 5 IDLKIVRDDPDLVRASQRVRGEDPGLVDVLLDADTARRSAIVEADSLRSEQKALGKQV-G 63
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E + + + D + I N+ P GGED ++
Sbjct: 64 KASGDEKAALLAKGKELAEQVKSAVARQNEADDAASNAQRAISNIVE-GAPPGGEDDYVV 122
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P +DH +LG++L + D + A+VSGS+FY+L + ML++GL+
Sbjct: 123 LEHVGQPREIENP-RDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQLGLLTMAAQ 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 182 KATANGFTLMIPPVLVRPEVMGGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++ + H++L
Sbjct: 241 EIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAAAEHQKL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 301 LGWEKEMLAAIDVPYRVI 318
>gi|300742531|ref|ZP_07072552.1| serine--tRNA ligase [Rothia dentocariosa M567]
gi|300381716|gb|EFJ78278.1| serine--tRNA ligase [Rothia dentocariosa M567]
Length = 434
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N E A+ R R + A+++ +LE + LR E+NA ++
Sbjct: 2 IDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VP GGED ++
Sbjct: 61 KAPKEEKPALVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVPTGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ + D A+VSGS+FY+LK + LE L+
Sbjct: 121 LKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATANGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL S P KY +S C+R EAGAAG TRG+ RVHQF+K EMFV+CQ E+++ HE
Sbjct: 240 MDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAEEIHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ +EE++ GL ++++
Sbjct: 300 QMRALEEEMLQKCGLAYRVI 319
>gi|311112424|ref|YP_003983646.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931]
gi|310943918|gb|ADP40212.1| serine--tRNA ligase [Rothia dentocariosa ATCC 17931]
Length = 434
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N E A+ R R + A+++ +LE + LR E+NA ++
Sbjct: 2 IDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VP GGED ++
Sbjct: 61 KAPKEEKPALVAQAKELAAHVANAKAASEAKTAEYEELLSSIENLIIDGVPTGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ + D A+VSGS+FY+LK + LE L+
Sbjct: 121 LKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSGSRFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATANGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL S P KY +S C+R EAGAAG TRG+ RVHQF+K EMFV+CQ E+++ HE
Sbjct: 240 MDEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAEEIHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ +EE++ GL ++++
Sbjct: 300 QMRALEEEMLQKCGLAYRVI 319
>gi|271961743|ref|YP_003335939.1| serine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|270504918|gb|ACZ83196.1| Serine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 420
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 178/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + + A+ R R + ++ E +L+L + + LR E+ ++ K
Sbjct: 2 IDLRTLREDPDRLRASQRARGEDDSVVETLLDLDSRRRGALSRFETLRAEQKSI-GKTVS 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+ L++ K+L + + E + KL EL +PN+ P GGED ++
Sbjct: 61 RASGDEKAALLDRAKDLAAQVKSAESEAEKLAGELDNLLYTVPNLVEEGAPAGGEDDFVL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG+ L D + A+VSGS+F++L+ L++GL+N +
Sbjct: 121 IEEVGEKPSFDFEPKDHLELGELLGAIDMERGAKVSGSRFFFLRGVGARLQLGLLNMAMQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ I+ GF P+ P +V+ ++ GF A ++VY + D L+GT+E+P+ H D
Sbjct: 181 QAIEAGFIPMIPPVLVKPESMKGTGFLGEHA-SEVYHLPEDDLFLVGTSEVPMAAYHADE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL LP +YA +S CFR EAG+ G TRG+ RVHQF K+EMF + +PE++ H L+
Sbjct: 240 ILDGGSLPYRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFSYTRPEDAHEEHLRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ + + L ++++
Sbjct: 300 DWEKEMLAKVELPYRVI 316
>gi|227505705|ref|ZP_03935754.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
gi|227197673|gb|EEI77721.1| seryl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
Length = 418
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 179/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V A+ R + L + +L E + D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDVVRASQVTRGEDPALVDQLLAADEARRSAILAADELRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LKE + E +L + ++ I N+ P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKEKVKKAEAELAEAEAKVNDLQFQISNVVE-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG++L + D A+V G++FYYL + L++G++
Sbjct: 120 LEEVGAIPEFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF + ++ ++Y + D L+GT+E+ + G H D
Sbjct: 180 KAREAGFQLMIPPVLVRPDIMAGTGFLGQHSD-EIYYLPADDLYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PLKY +S CFR EAG+ G TRG+ RVHQF KLEMFVFC+PEE++ H+ L+
Sbjct: 239 ILDLSDGPLKYTGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVFCKPEEAEEMHQMLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
++E+D+ +++ L ++ +
Sbjct: 299 KMEKDMLAAMELPYRTI 315
>gi|134096775|ref|YP_001102436.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133909398|emb|CAL99510.1| seryl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 395
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 169/292 (57%), Gaps = 4/292 (1%)
Query: 100 LELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEE 159
++ +L E+ + D LR E+ + ++ GK ER+ L+++ K L + E
Sbjct: 2 VDALLSADERRRSAVSRADSLRAEQKQLGKQV-GKAAGEEREHLLKKAKELSAQVKDAEA 60
Query: 160 DLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDI 219
+ + L + + + N+ P VP GGED + K VG P F+F VKDH +LG +L
Sbjct: 61 EQAEADQALVEAQKKLSNIVGPGVPPGGEDDYAVLKHVGVPPEFDFEVKDHLELGTSLGA 120
Query: 220 FDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGF 279
D + A+V+G++FY+L LE+ L+N + GFT + P +VR ++E GF
Sbjct: 121 MDMERGAKVAGARFYFLTGIGAQLELALLNMAAAHATANGFTLVVPPVLVRPEIMEGTGF 180
Query: 280 QPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAA 338
GA++ +VY +E D L+GT+E+P+ G H I+ PL+YA +S CFR EAG+
Sbjct: 181 L--GAHSSEVYRLEEDDLYLVGTSEVPLAGYHSGEIIDLGAGPLRYAGWSSCFRREAGSY 238
Query: 339 GTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
G TRG+ RVHQF+KLEMFV+C+ E++ + HE L+ EE++ + + + ++++
Sbjct: 239 GRDTRGIIRVHQFNKLEMFVYCREEDAVAEHERLLGWEEEMLAKIEVPYRVI 290
>gi|167629223|ref|YP_001679722.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|238687865|sp|B0TAQ9.1|SYS_HELMI RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|167591963|gb|ABZ83711.1| seryl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 422
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 183/318 (57%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N EAV ++ R +N +L+ LEL + + EV+ L+ +RNAV+ ++ +
Sbjct: 2 LDTKFVRANPEAVQEALQKRGANISLDDFLELDRRRRALVVEVESLKAKRNAVSAEIARR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + + LI E + + + + L+++L ++ ++ IPN+ H VPVG E+ ++
Sbjct: 62 KKAKEDAEALIAEMRQVGDQIKALDDELTRIELDMDNRMLYIPNIPHASVPVGTSEEDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+FPVK H+ +G+ L+I DF A++SG++F K LE +IN +
Sbjct: 122 EVRRWGTPRTFDFPVKAHWDIGEDLNILDFQRGAKISGARFTVYKGLGARLERAVINLMM 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+RG+T + P +V + G P+ A ++++ G D LI TAE+PV ++ +
Sbjct: 182 DTHAQRGYTEVLPPYLVNRQSMLGTGQLPKFAE-DMFAVAGTDYYLIPTAEVPVTNLYTN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE S E+L
Sbjct: 241 EILDADKLPIHHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPENSYDELEKL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E + LGL ++++
Sbjct: 301 TKDAEHILQLLGLPYRVI 318
>gi|404260194|ref|ZP_10963491.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
gi|403401305|dbj|GAC01901.1| serine--tRNA ligase [Gordonia namibiensis NBRC 108229]
Length = 419
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 184/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L L + + D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRASQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + + I N+ P+ P GGED ++
Sbjct: 61 KAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVAPEAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + L++GL+N
Sbjct: 121 LEHVGEPREIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KAAANGFTLMVPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|441518379|ref|ZP_21000102.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441454782|dbj|GAC58063.1| serine--tRNA ligase [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 418
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 179/324 (55%), Gaps = 18/324 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK-------EVDRLREERNAV 127
ID K +R+N E V + R R + EL +++L+ E D LR E+ +
Sbjct: 2 IDLKIVRENPELVRDSQRARGEDP------ELVDRLLDADAVRRTAIGEADALRAEQKGL 55
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
++ GK E+ L+ GK+L E + + + I N+ P P GG
Sbjct: 56 GKQV-GKASGEEKAALLARGKDLAEQVKAAVARQNEAAQTFDHAYRAISNIIAPQTPPGG 114
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
ED ++ + VG P P +DH +L ++L + D + A+VSGS+FY+L ML++GL
Sbjct: 115 EDDFVVLEHVGTPREIADP-RDHLELSESLGLIDMERGAKVSGSRFYFLTGPGAMLQLGL 173
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPV 306
+N ++ G+T + P +VR V+ GF GA+ +VY +E D L+GT+E+P+
Sbjct: 174 LNMAAAKATAAGYTMMIPPVLVRPEVMSGTGFL--GAHAAEVYRLEEDDLYLVGTSEVPL 231
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G H D IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE+++
Sbjct: 232 AGYHSDEILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAE 291
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ H+ L+ E+ + +++ + ++++
Sbjct: 292 AEHQRLLDFEKSMLAAIDVPYRVI 315
>gi|348562817|ref|XP_003467205.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Cavia
porcellus]
Length = 518
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 178/307 (57%), Gaps = 15/307 (4%)
Query: 98 ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGK 148
A+L ++ ++++ +Q+++ L E++ VA ++ L + + Q L G+
Sbjct: 84 ADLPGIISTWQELRQLQEQIRSLEAEKDTVAEAVRALLVNQDHSQVQQDPQYQALRTRGR 143
Query: 149 NLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVK 208
+++ LV L +L ++ +A +PN THPDVPVG E + + + VG+ F+F +
Sbjct: 144 EIRKQLVLLYPREDQLEEQFYLQALRLPNQTHPDVPVGNESQARVLQVVGDKPAFSFQPR 203
Query: 209 DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEI 268
H ++G+ LDI + VSG + YYL+ +L+ GL+N+TLS++++RGFTP+T P++
Sbjct: 204 GHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLSKLVRRGFTPMTVPDL 263
Query: 269 VRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYA 325
+R +V E CG P + +QVY+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 264 LRGAVFEGCGMTPNASPSQVYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRTV 323
Query: 326 AFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSL 383
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + L
Sbjct: 324 CSSTCYRPETD-TGREPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLALQVEILTEL 382
Query: 384 GLHFKLL 390
GLHF++L
Sbjct: 383 GLHFRVL 389
>gi|403305221|ref|XP_003943166.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 1 [Saimiri
boliviensis boliviensis]
Length = 518
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 179/308 (58%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPS-ERQKLIEEG 147
+A+L ++ ++++ +++++ L EE+ AV AN+ G+++ + Q L G
Sbjct: 83 SADLPAIISTWQELRQLREQIRSLEEEKAAVTKAVQALLANRDHGEVQQDPQYQSLRARG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ LV L +L +E +A +PN THPDVPVG E + + VG+ F+F
Sbjct: 143 REIRKELVPLYPREAQLEEEFYLQALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T ++++ RGFTP+T P+
Sbjct: 203 RGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLHRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R +V E CG P +Q+Y+I+ + D L GT+E+ + G MD ++ LP++
Sbjct: 263 LLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTSEVGLAGYFMDHSVAFRDLPVRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETN-TGKDPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLALQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|338176235|ref|YP_004653045.1| seryl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
gi|336480593|emb|CCB87191.1| seryl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
Length = 428
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR--NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
+D K IR N EA+ A ++ + +S + ++ +L L + ++ +V++L+ ERN +++++
Sbjct: 2 LDIKLIRQNPEAIKAKVKTKEPSSESVIDAILVLDRQSREIKTKVEQLKSERNVLSDQIG 61
Query: 133 G-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--ED 189
K + L+E+ + + + +L+ L L +EL Q IPN+ D+PV +D
Sbjct: 62 ALKRRGEDASALLEKVSSFGDEIHSLDHALAPLEEELIQLLSTIPNLPMDDIPVSDSPKD 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+I++ P VF+FP K+H +L + L++FDF A++SG+ + + LE L+N
Sbjct: 122 NVMIKEFKQRP-VFDFPFKNHVELNERLELFDFKRGAKISGTGWPVYRGMGARLEWALLN 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVG 307
+ + IK GF P +VR ++ G P+ N Q + I D LI TAE+P+
Sbjct: 181 YMIEIHIKNGFEQWIPPILVRKEILFGSGQLPKFENQQ-FKINDPDYHLYLIPTAEVPLN 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G+H D IL LPLKY A++ CFR EAGAAG+ RGL R+HQF+K+EMF F +PEES
Sbjct: 240 GLHYDEILETDHLPLKYIAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFSKPEESMK 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLLLFLA 394
++++ E++ L LH++ +L +
Sbjct: 300 LFDQMMASAEEILQGLDLHYRNMLLVT 326
>gi|282891888|ref|ZP_06300367.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498148|gb|EFB40488.1| hypothetical protein pah_c200o037 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 436
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 189/329 (57%), Gaps = 9/329 (2%)
Query: 73 AAIDFKWIRDNKEAVSANIRNR--NSNANLELVLELYEKMLNVQKEVDRLREERNAVANK 130
+ +D K IR N EA+ A ++ + +S + ++ +L L + ++ +V++L+ ERN ++++
Sbjct: 8 SMLDIKLIRQNPEAIKAKVKTKEPSSESVIDAILVLDRQSREIKTKVEQLKSERNVLSDQ 67
Query: 131 MKG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-- 187
+ K + L+E+ + + + +L+ L L +EL Q IPN+ D+PV
Sbjct: 68 IGALKRRGEDASALLEKVSSFGDEIHSLDHALAPLEEELIQLLSTIPNLPMDDIPVSDSP 127
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+D +I++ P VF+FP K+H +L + L++FDF A++SG+ + + LE L
Sbjct: 128 KDNVMIKEFKQRP-VFDFPFKNHVELNERLELFDFKRGAKISGTGWPVYRGMGARLEWAL 186
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIP 305
+N+ + IK GF P +VR ++ G P+ N Q + I D LI TAE+P
Sbjct: 187 LNYMIEIHIKNGFEQWIPPILVRKEILFGSGQLPKFENQQ-FKINDPDYHLYLIPTAEVP 245
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G+H D IL LPLKY A++ CFR EAGAAG+ RGL R+HQF+K+EMF F +PEES
Sbjct: 246 LNGLHYDEILETDHLPLKYIAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFSKPEES 305
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLLLFLA 394
++++ E++ L LH++ +L +
Sbjct: 306 MKLFDQMMASAEEILQGLDLHYRNMLLVT 334
>gi|440638666|gb|ELR08585.1| seryl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 491
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 181/348 (52%), Gaps = 32/348 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNA---NLELVLELYEKMLNVQKEVDRLREERN--- 125
K ID K IR N + + N RN A N + + EL+ + Q++ +RE+ N
Sbjct: 35 KPTIDIKHIRQNPDLYTQNAIERNYGAQSSNPQRINELFAQWQGHQRDGRSMREQSNVLQ 94
Query: 126 -AVANKMKGK---------LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
A+AN + E R +I ++LK L ++E + KLT ++ A +
Sbjct: 95 AALANPKSARHQDAARAIGFEDLSRDGIIAASRSLKSKLASIETEEAKLTRSIEGLALEL 154
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
PN T PD P G E ++ +PS K H +G +L I DF +A SG +YY
Sbjct: 155 PNFTSPDTPRGHEP-KVLSYINEHPS--GESEKSHVDIGTSLGILDFASAGSTSGWGWYY 211
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR--GANTQVYSI-- 291
L A LE L+ + LS+ RG+T + P IV S V CGF PR TQ+Y+I
Sbjct: 212 LMGAAAQLEQALVQFALSKATARGWTLVAPPSIVYSHVAAACGFMPRDQSGETQIYTIAQ 271
Query: 292 -EG------ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRG 344
EG + CL GTAEIP+ G+ ++L ++LP KY A S C+R EAGA G T+G
Sbjct: 272 GEGDVARGRPELCLAGTAEIPLAGMGAGALLDSAVLPRKYVAASRCYRAEAGARGVDTKG 331
Query: 345 LYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
LYRVH+F+K+E+F + P E + EE++ ++ ++ LGLH ++L
Sbjct: 332 LYRVHEFTKVELFSWTTPELEAATEVFEEIVDMQVEVLRELGLHCRVL 379
>gi|354614974|ref|ZP_09032793.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
gi|353220680|gb|EHB85099.1| Seryl-tRNA synthetase [Saccharomonospora paurometabolica YIM 90007]
Length = 420
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 181/317 (57%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+ + V A+ R R + + + +L L + + D LR E+ + ++ G
Sbjct: 2 IDLRILREEPDVVRASQRARGEDDGVVDRLLALDAERRSAIATADNLRAEQKQLGKQI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER++L+ GK L + E + + E + + +PN+ HP+VP GGED +
Sbjct: 61 KASGDEREELLARGKELAARVKDAEAEQNRAGAEFDELHRSVPNVVHPEVPAGGEDDYTV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P+ F+F DH L + L D + A+VSG++FY+L L++ L+N +
Sbjct: 121 LKHVGTPAEFDFEPADHLALAEGLGALDMERGAKVSGARFYFLTGIGAQLQLALLNLAAA 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ ++GFT + P +VR V+ GF +++VY + D L+GT+E+P+ G H D
Sbjct: 181 QATEKGFTLMIPPVLVRPEVMSGTGFLGE-HDSEVYRLAEDDLYLVGTSEVPLAGYHSDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFVF +PE++++ H L+
Sbjct: 240 ILDLSGGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFSRPEDAEAEHANLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
EE++ + + + ++++
Sbjct: 300 SWEEEMLAKIEVPYRVI 316
>gi|94985040|ref|YP_604404.1| seryl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
gi|166219870|sp|Q1IZU9.1|SYS_DEIGD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|94555321|gb|ABF45235.1| seryl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
Length = 437
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 183/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR++ V I + N +L+ +L + +++ +++ V+ L+ ERNA A K+ K
Sbjct: 2 LDLKFIREHPGTVKHAIAVKGVNLDLDELLRIDRELVELRQRVEALQTERNANA-KLVPK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P ER LI++GK+L E + LE L D+L+Q +PN+ HP VPVG +D +
Sbjct: 61 ATPEERPHLIQKGKDLAEDIKALEPQLRAHEDQLRQLLLRVPNIPHPSVPVGQDDSENVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F FP DH +L + D + A VSGS+ Y LK +AV+LEM ++ + L
Sbjct: 121 LRREGQLPEFAFPPLDHVELLERQGWSDPERVARVSGSRSYLLKGDAVLLEMAVLMFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ RG TPL+T +VR + G P G QVY IEG + L GTAE+PV ++
Sbjct: 181 FLRGRGLTPLSTTALVRPETLVGSGHFP-GGEDQVYKIEGDELMLAGTAEVPVNSLYAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS--YHEE 371
LS LPL +AA S FR+EAG+AG RGL RVH+F K+E +V + +E+++ +
Sbjct: 240 QLSYEELPLAFAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVMTRADEAEALRWFGA 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E L +L L ++++
Sbjct: 300 ILENAEGLLRALELPYRVV 318
>gi|345849283|ref|ZP_08802296.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
gi|345639189|gb|EGX60683.1| seryl-tRNA synthetase [Streptomyces zinciresistens K42]
Length = 425
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R R + L + +L E+ + D LR E+ + K+
Sbjct: 2 IDLRLLREDPDRVRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQL-GKLIP 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ +L+++ L + + + E Q+ + N+ HPDVPVGGE+ +
Sbjct: 61 KAAGDEKAELLKKASRLAADVKAADAERDAADVETQELLVRLGNLVHPDVPVGGEEDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G F F +DH +LG L D + A+VSGS+FY+L +LE+ L+N
Sbjct: 121 LETHGEIRDFAAEGFEPRDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ GFTP+ TP +VR + GF + A VY ++ D L+GT+E+P+ H
Sbjct: 181 AMAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL LPL+YA FS CFR EAG+ G TRG++RVHQF K+EMF + E+S + H+
Sbjct: 240 MDEILDADKLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVASEDSRAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ +SL L ++++
Sbjct: 300 RLLEWEKQWLTSLELPYRVI 319
>gi|441510939|ref|ZP_20992837.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
gi|441444917|dbj|GAC50798.1| serine--tRNA ligase [Gordonia aichiensis NBRC 108223]
Length = 423
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L +++L+ + D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRASQRVRGEDPGLVDVLLDADSARRAAIVDADSLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E + + D + I N+ P GGED ++
Sbjct: 61 KASGDEKAALLSKGKELAEQVKAAVARQNEADDAASNAQRAISNIVE-GAPPGGEDDYVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + ML++GL+
Sbjct: 120 LEYVGQPREIENP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQLGLLTMAAQ 178
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 179 KATANGFTLMIPPVLVRPEVMGGTGFLGAHAD-EVYHLDKEDDLYLVGTSEVPLAGYHMD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++ + H++L
Sbjct: 238 EIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAAAEHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 298 LGWEKEMLAAIDVPYRVI 315
>gi|406996131|gb|EKE14604.1| hypothetical protein ACD_12C00396G0002 [uncultured bacterium]
Length = 417
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 179/321 (55%), Gaps = 13/321 (4%)
Query: 74 AIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
++DF IR NKE V +N+N +++ +L L ++ + +++ LREERN ++
Sbjct: 3 SLDF--IRANKEKVITAAKNKNRKVDIDKILLLDDERRELIQKIQVLREERNKTSHS--- 57
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+P E K I GK +KE L LE+ LV L +PN+ P+VPVG ++ +
Sbjct: 58 --KPDE--KTIARGKEIKEELKKLEDQLVTNHQSLDTLLSYVPNVPLPEVPVGKDESDNV 113
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
K G F+F +K H LG +LD+FD + ++VSG + Y+LKN+A L+ ++ +
Sbjct: 114 EVKKWGKIPKFDFELKSHLDLGLSLDLFDLERGSKVSGFRGYFLKNQAAQLQFAILFYVF 173
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++K+G+TP+ P IV+ + G P G +VY + D L GTAE+PV
Sbjct: 174 QKLVKKGYTPIIAPSIVKGFTLFGSGQFPWGEQ-EVYKLNDEDAYLAGTAEVPVTSYFSG 232
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHE 370
IL+E LP K+ AFS CFR EAG+ G +GLYRVH+F K+E + + EES HE
Sbjct: 233 EILNEKDLPKKFVAFSPCFRREAGSYGKDVKGLYRVHEFWKVEQVIIAKNDIEESKKLHE 292
Query: 371 ELIRIEEDLYSSLGLHFKLLL 391
EL + E++ + ++ LL
Sbjct: 293 ELQKNTEEIIEDFKIPYRRLL 313
>gi|426201140|gb|EKV51063.1| hypothetical protein AGABI2DRAFT_196743 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 184/337 (54%), Gaps = 23/337 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLEL---YEKMLNVQKEVDRLREERNAVANKM 131
+D+ I N + +N R + ++ V L Y + + + ++ +R E+N + ++
Sbjct: 1 MDYASIIQNLDTRISNALARKAPIDVSAVSSLSTLYTQYKDHLRSINSIRAEQNTLGVEI 60
Query: 132 ----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K K P +R +L++ K+LK L E+ L L L + PN THP P+G
Sbjct: 61 QVAAKAKDIP-KRDELLDRAKSLKSTLFEGEKTLSGLEHRLLSLSLTFPNDTHPQSPLGP 119
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E + T G + P ++H + K ++ DF++ A V+GS +YYL NEA +LEM L
Sbjct: 120 EPNAKTISTHGPTPLPPSPARNHLSISKKFNLLDFESGAIVTGSSWYYLLNEAAILEMAL 179
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---GANTQVYSIEG----------- 293
+N+ LS ++ GF P+TTP++VR+ V +CGF PR GA +Q+Y I
Sbjct: 180 VNYALSVAVRAGFVPVTTPDVVRADVAARCGFTPREQGGAASQMYHIANHHIPSSSQSPP 239
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
+ L GTAEIP+ G+ + I + LPLK+ FR+EAGA+ +RGLYRVHQF+K
Sbjct: 240 PELVLAGTAEIPLAGLFANKIYPSNQLPLKFVGVGRSFRSEAGASAE-SRGLYRVHQFTK 298
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+E+F ++S+ E + +++++ LGL F++L
Sbjct: 299 VELFALTPEDQSEEMMECIKDVQKNILEGLGLSFRIL 335
>gi|420153256|ref|ZP_14660245.1| serine--tRNA ligase [Actinomyces massiliensis F0489]
gi|394761272|gb|EJF43664.1| serine--tRNA ligase [Actinomyces massiliensis F0489]
Length = 423
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 176/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ L + ++E E + + + LR E+ V +K G
Sbjct: 2 IDLRVLRENPEPYRASQRARGADVALVDRIIEADEARRTLLQNFESLRAEQKTV-SKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L G+ + L + A N+ P GGE D +
Sbjct: 61 KASPQERPAILARAKELAAGVKEAQAQADAAAAALDELAHQFQNLIE-GAPAGGEEDYVV 119
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH LG+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 120 LRHEGGRPRDFAAEGFEPADHLALGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 180 AALDRAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S PL+Y +S C+R EAGAAG TRG+ RVHQF+K EMF + +PE++ +
Sbjct: 238 YHADEILDLSAGPLRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFAYVRPEDAAAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HE L+ +EE++ + + L ++++
Sbjct: 298 HERLLAMEEEMLALVELPYRVI 319
>gi|389852601|ref|YP_006354835.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249907|gb|AFK22760.1| seryl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 455
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 189/347 (54%), Gaps = 38/347 (10%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+ E V ++ R ++ + L+L + KE+++LR ERN +A ++
Sbjct: 2 LDIKLIREKPELVKNDLIKRGELEKVKWIDEILKLDAEWRTKLKEINKLRHERNKIAIEI 61
Query: 132 KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
+ + E L+ + K + + TLE+++ +L + +PN+THP VPVG E+
Sbjct: 62 GKRRKAGEPVDDLLAKSKEIVRKIETLEKEVEELRKRIDYYLWRLPNITHPSVPVGKDEN 121
Query: 190 CSIIRKTVGNPSVFN--------------------FPVKDHFQLGKALDIFDFDAAAEVS 229
++ + G V+ + K H L + L DF AA+VS
Sbjct: 122 DNVPIRFWGKARVWKGHLERFLEQSQGKMEYEVLEWKPKLHVDLLEILGGADFARAAKVS 181
Query: 230 GSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--- 286
GS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR V E GA T
Sbjct: 182 GSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEE-------GATTFED 234
Query: 287 ---QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
+Y +EG D LI TAE P+ G+H + IL LPL Y AFS CFR EAG AG T+
Sbjct: 235 FEDVIYKVEGEDLYLIPTAEHPLAGLHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTK 294
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
G++RVHQF K+E FV+ +PEES +HE +IR E+L+ L + ++++
Sbjct: 295 GIFRVHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQELEIPYRVV 341
>gi|343926267|ref|ZP_08765776.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
gi|343763896|dbj|GAA12702.1| seryl-tRNA synthetase [Gordonia alkanivorans NBRC 16433]
Length = 419
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 183/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +RD+ + V + R R + L L + + D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRTSQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + + I N+ P+ P GGED I+
Sbjct: 61 KAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVAPEAPAGGEDDYIV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + L++GL+N
Sbjct: 121 LEHVGEPREIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KAAANGFTLMVPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCRPEDAEAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|377564973|ref|ZP_09794281.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
gi|377527861|dbj|GAB39446.1| seryl-tRNA synthetase [Gordonia sputi NBRC 100414]
Length = 425
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 184/326 (56%), Gaps = 22/326 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L +++L+ + E D LR E+ A+ ++ G
Sbjct: 5 IDLKIVRDDPDLVRASQRVRGEDPGLVDVLLDADSTRRSAIVEADSLRSEQKALGKQV-G 63
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEA--------QCIPNMTHPDVPV 185
K E+ L+ +GK L D VK Q EA + I N+ P
Sbjct: 64 KASGDEKAALLAKGKELA--------DQVKAAVARQNEADEAASNAQRAISNIVE-GAPP 114
Query: 186 GGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
GGED ++ + VG P P KDH +LG++L + D + A+VSGS+FY+L + ML++
Sbjct: 115 GGEDDYVVLEHVGQPREIENP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGQGAMLQL 173
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEI 304
GL+ + GFT + P +VR V+ GF A+ +VY ++ D L+GT+E+
Sbjct: 174 GLLTMAAQKATANGFTLMIPPVLVRPEVMGGTGFLGAHAD-EVYHLDKDDDLYLVGTSEV 232
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
P+ G HMD I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE+
Sbjct: 233 PLAGYHMDEIIDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPED 292
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
+ + H++L+ E+++ +++ + ++++
Sbjct: 293 TAAEHQKLLGWEKEMLAAIDVPYRVI 318
>gi|18977576|ref|NP_578933.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|397651704|ref|YP_006492285.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30173185|sp|Q8U1K2.1|SYS_PYRFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|18893291|gb|AAL81328.1| seryl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|393189295|gb|AFN03993.1| seryl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 455
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 190/343 (55%), Gaps = 30/343 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNR---NSNANLELVLELYEKMLNVQKEVDRLREERNAVA--- 128
+D IR+N E V +++ R + A ++ +L L E+ KE++RLR ERN +A
Sbjct: 2 LDINLIRNNPELVKNDLKKRGELDKIAWIDEILRLDEEWRKKLKEINRLRHERNKIAIEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K K EP E L+ + K + + + LE+++ +L + +PN+THP VPVG +
Sbjct: 62 GKRKKAGEPVE--DLLAKSKEIVKRIEELEKEVEELRKRIDYYLWRLPNITHPSVPVGKD 119
Query: 189 DC-------------------SIIRKTVGNPS--VFNFPVKDHFQLGKALDIFDFDAAAE 227
+ S + ++ G V + K H L + L DF AA+
Sbjct: 120 ENDNVPIRFWGKAKVWKGHLESFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFARAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+
Sbjct: 180 VSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTTFEDFEDV 238
Query: 288 VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+Y +EG D LI TAE P+ G+H + IL LPL Y AFS CFR EAG AG T+G++R
Sbjct: 239 IYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTKGIFR 298
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF K+E FV+ +PEES +HE L+R E+L+ L + ++++
Sbjct: 299 VHQFHKVEQFVYSRPEESWEWHERLVRNAEELFQELEIPYRVV 341
>gi|51891148|ref|YP_073839.1| seryl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|67461732|sp|Q67TJ8.1|SYS_SYMTH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51854837|dbj|BAD38995.1| seryl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 421
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 182/320 (56%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D +++R N + V + N+ + +L+ +L L + + EV++L+ RN V+ ++
Sbjct: 2 LDLRFVRTNPDVVRQALINKGVSVDLDRILALDVERRQILAEVEQLKARRNQVSKQVGIL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + + +I E + + + L++ +++DELQ +PN+ PDVPVG ++ +
Sbjct: 62 KQQGQDVSAIIAEMGAIGDRIKELDDRERQVSDELQDLLYQLPNLPAPDVPVGPDETGNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
K G P F FPVK H+ LG A+D DF+ AA+V+GS+F ++K L L+++ +
Sbjct: 122 EVKRWGEPRQFAFPVKPHWDLGVAMDGLDFERAAKVTGSRFSFIKGGLARLHRALVSFFI 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ +RG+ + P I+ ++ G P+ V+S+ G D L TAE+P+ +H D
Sbjct: 182 DYLTERGYREVLPPVIINTASYYGSGQFPK-FKEDVFSLAGTDYHLASTAEVPLVNMHRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL E++LPL+Y +S CFR+EAGAAG TRGL R H F K+EM F +PEES+ E+
Sbjct: 241 EILDEAVLPLRYVGYSGCFRSEAGAAGRDTRGLIRQHYFEKVEMVQFTRPEESEQALMEI 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
+ E + L L ++ +L
Sbjct: 301 VANAEGMLEQLNLPYRRMLM 320
>gi|404421062|ref|ZP_11002789.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403659414|gb|EJZ14063.1| seryl-tRNA ligase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 418
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 182/317 (57%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N ++V A+ R R + A ++ +LE D LR ++ A A+K+ G
Sbjct: 2 IDLKLLRENPDSVRASQRARGEDPARVDALLEADTARRAAISTADNLRADQKA-ASKLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+++ K+L E + E + I N+ VP GGED ++
Sbjct: 61 KATPEERPALLQQAKDLAEQVKAAEAAQAEAESAFTAAHMAIGNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P P KDH +LG+AL + D + A+VSGS+FY+L +L++GL+
Sbjct: 121 LDTVGEPRAIENP-KDHLELGEALGLIDMERGAKVSGSRFYFLTGAGALLQLGLLQLATQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 VAVRNGFTLMIPPVLVRPEVMAGTGFLGAHAD-EVYRLEADDLYLVGTSEVPLAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H++L+
Sbjct: 239 ILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAEAEHQKLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ +++ + ++++
Sbjct: 299 GWQREMLAAIEVPYRVI 315
>gi|118469581|ref|YP_890626.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|399990615|ref|YP_006570966.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|441217139|ref|ZP_20977322.1| serine--tRNA ligase [Mycobacterium smegmatis MKD8]
gi|166222747|sp|A0R638.1|SYS_MYCS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118170868|gb|ABK71764.1| seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|399235178|gb|AFP42671.1| Seryl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|440624193|gb|ELQ86060.1| serine--tRNA ligase [Mycobacterium smegmatis MKD8]
Length = 417
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N + V A+ R R + L + +L + D LR E+ A A+K+ G
Sbjct: 2 IDLRLLRENPDIVRASQRARGEDPALVDALLAADTARRSAVSAADNLRAEQKA-ASKLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L++ K+L E + E + I N+ VP GGED ++
Sbjct: 61 KASPDERPALLQRAKDLAEQVKAAEAAQAEAEQAFTAAHMAISNVIFEGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P P KDH +LG++L + D + A+VSGS+FY+L +L++GL+
Sbjct: 121 LDTVGEPRAIENP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGAGALLQLGLLQLATQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 VAVQNGFTLMIPPVLVRPEVMRGTGFLGAHAD-EVYRLEADDMYLVGTSEVPLAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ L+
Sbjct: 239 ILDLSAGPRRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ +++ + ++++
Sbjct: 299 GWQREMLAAIEVPYRVI 315
>gi|365827133|ref|ZP_09369004.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 849 str. F0330]
gi|365265383|gb|EHM95149.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 849 str. F0330]
Length = 426
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ +L + V+ E + LR E+ AV+ + G
Sbjct: 2 IDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKAVSRSV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L E + E EL A+ N+ P GGE D +
Sbjct: 61 KASPEERPAILASAKELAEQVKAAEAASSAAAVELDALARQFANLIE-GAPSGGEEDYVV 119
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH +G+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 120 LRHEGGEPRDFTAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 180 AALDAAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL + P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE +++
Sbjct: 238 YHADEILDLTAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEAAEAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H L+ +EE++ + + L ++++
Sbjct: 298 HARLLAMEEEMLALVELPYRVI 319
>gi|402076556|gb|EJT71979.1| seryl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 521
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 196/393 (49%), Gaps = 46/393 (11%)
Query: 40 PFRLLARAF-SAPAL--QTIDTTDNKGGVAVKPQW--KAAIDFKWIRDNKEAVSANIRNR 94
P L+ R F ++P + Q+ D G +P K ID K IR N N R
Sbjct: 20 PSPLVRRPFHTSPVVRQQSETGADADTGAPFRPTSAPKRVIDIKHIRQNPTLYEQNCIER 79
Query: 95 NSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKMKGKLE--PS----------- 138
N ++ L+E+ Q+E LRE +N+++G+L PS
Sbjct: 80 NYKDYSDIPARINLLHEQWQAKQREGRSLRER----SNQLRGELATPPSSWSKAEAEVFT 135
Query: 139 --ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII--- 193
R+ +I+E + LKE L +E+ LT+E+ + A+ +PN+T P G E +
Sbjct: 136 AERRESIIKEARELKEELSVIEDAEASLTEEMSRLAEVLPNLTSASTPRGEEPLVLSYIN 195
Query: 194 ---RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ G PS + + H +G L + DF AA SG +YYL NE LE L+ +
Sbjct: 196 DDPEQESGRPSETDRVWRSHVHIGSELGLLDFAGAASSSGWGWYYLLNEGAELEQALVQY 255
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI--EGADQC-------LI 299
TL+ + G+ ++ P IV S + CGFQPR N Q+Y + AD L
Sbjct: 256 TLAVATRHGWGQVSPPSIVYSHIANACGFQPRDQNGEMQIYELARSAADTARGKPSLSLT 315
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GTAEIP+ + DS L ES LPL+ A S C+R EAGA G T+GLYRVH+F+K+EMF +
Sbjct: 316 GTAEIPLAAMKADSQLEESELPLRRVAASRCYRAEAGARGADTKGLYRVHEFTKVEMFAW 375
Query: 360 CQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
P E ++ EE++ I+ ++ SLGL ++L
Sbjct: 376 SAPSEAAAEDVFEEMLDIQTEILGSLGLRCRVL 408
>gi|54022104|ref|YP_116346.1| seryl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|67461690|sp|Q5Z3K9.1|SYS_NOCFA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|54013612|dbj|BAD54982.1| putative seryl-tRNA synthase [Nocardia farcinica IFM 10152]
Length = 420
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 180/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ +AV A+ R R + L + +LE D LR E+ A++ ++ G
Sbjct: 2 IDLRLLREDPDAVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEQKAMSKQI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ + L + E +L + + N+ P VP GGED ++
Sbjct: 61 KAPKEERSALLARAQELSVKVKEAEAAQHAADADLDAAHRALSNVVLPAVPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG P F+F KDH +LG+AL + D + A+VSGS+FY+L +L++GL+
Sbjct: 121 LETVGTPPEFDFEPKDHLELGEALGLMDMERGAKVSGSRFYFLTGHGALLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT + P +VR V+ GF R A +VY + D L+GT+E+P+ G H D
Sbjct: 181 KAVANGFTMMIPPVLVRPEVMAGTGFLGRHA-AEVYHLADDDMYLVGTSEVPLAGYHADE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+ P+++++ HE L+
Sbjct: 240 ILDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYTTPDQAEAEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E ++ +++ + ++++
Sbjct: 300 AWEREMLAAIEVPYRII 316
>gi|385651147|ref|ZP_10045700.1| seryl-tRNA ligase [Leucobacter chromiiresistens JG 31]
Length = 423
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 176/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R++ EAV + R R N A ++ L E + LR E+N ++K
Sbjct: 2 IDPVLLRNDPEAVKRSQRARGNDEAVVDEALAADASRRAALGEFESLRAEQNEFGKQVKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ +LI+ + L + + E + + I N+ VP GGE+ +
Sbjct: 62 A-SKEEKPELIKRAQQLAASVKAADARAKAAEAEFEAVSLRIENLVIEGVPSGGEENFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F +DH +LG+ L D + A+VSG++FY+L+ LE+ L+N L
Sbjct: 121 LREVGERPDFDFEPRDHLELGEMLGAIDMERGAKVSGARFYFLRGVGARLELALMNLALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFTPL TP +V+ +++ GF A+ +VY + D L GT+E+ + G H D
Sbjct: 181 RALHHGFTPLITPTLVKPEIMQGTGFLGEHAD-EVYHLPAQDLFLTGTSEVALAGYHADE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P++YA +S C+R+EAG+ G TRG+ RVHQF+KLEMFV+ P E+++ HE L+
Sbjct: 240 IIDVAGGPIRYAGWSTCYRSEAGSHGKDTRGILRVHQFNKLEMFVYTDPAEAEAEHERLV 299
Query: 374 RIEEDLYSSLGLHFKLL 390
+E++ +LGLH++++
Sbjct: 300 GWQEEILQALGLHYRVI 316
>gi|429731727|ref|ZP_19266351.1| serine--tRNA ligase [Corynebacterium durum F0235]
gi|429144946|gb|EKX88046.1| serine--tRNA ligase [Corynebacterium durum F0235]
Length = 421
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 176/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V A+ R + L + ++ E D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDVVRASQTTRGEDPELVDQLIAADEARRESIAAADALRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + + E+ + I N+ P GGED I+
Sbjct: 61 QAAPEDRPALLEGSNQLKAKVKEADAAQKAAEAEVGRLQLLISNVVD-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P+ F+F KDH +LG++L + D + +VSGS+FY+L ML++ ++
Sbjct: 120 LEHVGEPTTFDFEPKDHLELGESLGLIDMERGTKVSGSRFYFLTGHGAMLQLAMLTLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF TTP +VR V++ GF A+ +VY + D L+GT+E+ + G H
Sbjct: 180 KAMAAGFQLTTTPVLVRPEVMQGTGFLGAHAD-EVYYLPADDLYLVGTSEVALAGYHQGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++ + H++L+
Sbjct: 239 IIDLSAGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSWCKPEDAAAEHQKLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E D+ +++ + ++++
Sbjct: 299 DMERDMLAAIEVPYRII 315
>gi|440465158|gb|ELQ34498.1| seryl-tRNA synthetase synthetase [Magnaporthe oryzae Y34]
Length = 532
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 182/358 (50%), Gaps = 39/358 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANI--RNRNSNANLELVLE-LYEKMLNVQKEVDRLREERNAVA 128
KA ID K IR N N RN S + + + L+E+ Q+E LRE N +
Sbjct: 61 KAVIDLKHIRQNPALYEQNCVERNYKSQSTYPVRINALFEQWHERQREGRTLRERSNLLR 120
Query: 129 NKMKG--------------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ L R++L+EEGK LK+ L ++E+ +L DE+
Sbjct: 121 RQLANPSASLTEAPDPRFQDLTNMSREELLEEGKRLKDQLSSIEDSEARLEDEMHSLGLA 180
Query: 175 IPNMTHPDVPVGGEDC--SIIRKTVGNPSVF-------NFPVKDHFQLGKALDIFDFDAA 225
+PN+T P G E S I +P+ + + H +G L I DF A
Sbjct: 181 LPNLTSTSTPRGSEPLVLSYINVENDDPTALLESTGKSDRVWRSHVHIGSELGIMDFAGA 240
Query: 226 AEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN 285
A SG +YYL E LE L+ + L+ + G+T ++ P IV S + CGFQPR N
Sbjct: 241 ATASGWGWYYLVGEGAALEQALVQYALAVATRHGWTQVSPPSIVYSHIAGACGFQPRDHN 300
Query: 286 --TQVYSIEGA---------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTE 334
TQ+Y++ + + CL TAEIP+ G+ D+ L ES L ++ A S C+R E
Sbjct: 301 GETQIYNLAQSASDAERGRPELCLAATAEIPLAGMKADTQLEESELSMRRVAVSRCYRAE 360
Query: 335 AGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
AGA G T+GLYRVH+F+K+EMF + P+ES++ +E++ I+ ++ +LGL ++L
Sbjct: 361 AGARGVDTKGLYRVHEFTKVEMFAWTSPDESETLDVFDEMLDIQTEILGALGLSCRVL 418
>gi|403509363|ref|YP_006641001.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
gi|402800555|gb|AFR07965.1| serine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
Length = 427
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 176/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ E + A+ R R + A + +L L + + LR E+ +V +
Sbjct: 2 IDLRALREDPERLRASQRARGEDPAVADRLLALDADRRSALTRFETLRAEQKSVGKSVS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER+ L+ + ++L + E + +L DEL +PN+ P GG D ++
Sbjct: 61 KASPEEREGLLAKARSLAAEVKEAEAEAGRLGDELDAVLARVPNLVEEGAPEGGVDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG P F+F +DH +LG+ L D + A+VSG++FY+L LE+ L+N ++
Sbjct: 121 LETVGEPREFDFTPRDHLELGEMLGAIDMERGAKVSGARFYFLTGVGARLELALLNMAMN 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ ++ GFTP+ P +V+ +E GF ++ +VY + D L+GT+E+ + G H
Sbjct: 181 QAVEAGFTPMIPPVLVKPETMEGTGFLGEHSD-EVYRLPEDDLYLVGTSEVALAGYHGGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL +P +Y +S CFR EAG+ G TRG+ RVHQF+K+EMFV+ P+++ HE L+
Sbjct: 240 ILPGESMPRRYIGWSSCFRREAGSYGKDTRGIIRVHQFNKVEMFVYTHPDQAHEEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E + L L ++++
Sbjct: 300 AWERRMLDKLDLPYRVV 316
>gi|388582875|gb|EIM23178.1| seryl-tRNA synthetase [Wallemia sebi CBS 633.66]
Length = 413
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 179/324 (55%), Gaps = 28/324 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
K ++FK +++ E N NRN +L L +Y K ++ E+++ + E+
Sbjct: 2 KPRLNFKGVKNEIEYFKKNNINRNIKLDLNSFLSIYNKSTTLENELNKTKNEQTK----- 56
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
++ K LK + LE++L DEL IPN +HP P+ E
Sbjct: 57 -------------QQTKELKLVIKELEKNLKFAKDELFDLTSQIPNKSHPKSPINNEPNE 103
Query: 192 IIRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
I+ G P+ + P++DH + L+ + A+++SG+ F LK+E +LE LI +
Sbjct: 104 ILS---GGPTATPSTPLRDHLNIANRLNAIE--NASDISGNGFTILKDELAVLEHALIQF 158
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQ---CLIGTAEIPV 306
+L+ ++ G+ +T P+IV+ + +CGF PR ++ Q YSI + CL GTAEIP+
Sbjct: 159 SLNIAVENGYKLITIPDIVKLDIANRCGFLPRDNSSNQTYSITNSSDNPLCLAGTAEIPL 218
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G+H + +L++S LPLKY A H FR EAGA G TRGLYR+HQF+K+E+F + SD
Sbjct: 219 AGLHYNQLLNQSSLPLKYVACGHAFRAEAGARGRDTRGLYRLHQFTKVELFSLTDEKSSD 278
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
S EE+I +++ + +L L +++L
Sbjct: 279 SMLEEIINVQKQVVEALNLPYRIL 302
>gi|429848011|gb|ELA23545.1| seryl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 513
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 184/349 (52%), Gaps = 30/349 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREE----R 124
K ID + IR+N N +RN + + + E++ + +QK+ +RE+ R
Sbjct: 51 KPIIDIRRIRENPSLFEQNCLDRNYAVQSKSPARINEIFTQWQALQKDSRAVREKSNLLR 110
Query: 125 NAVANKMKGK-------LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+AN + L+ R +L+EE + LK+ L +E++ KL +E++ A IPN
Sbjct: 111 RQIANPASVRDDADFVTLKDMSRGQLLEEARLLKQSLSVVEQNEAKLVEEMESLALGIPN 170
Query: 178 MTHPDVPVGGEDC--SIIRKTVGNPSVFNFPV-KDHFQLGKALDIFDFDAAAEVSGSKFY 234
+T PVG E S I PS + V + H +G L + DF AA SG +Y
Sbjct: 171 LTSEVTPVGDEPLLLSYINDHPNEPSSASDTVWRSHIHIGSELGLLDFAAAGTTSGWGWY 230
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIE 292
YL +EA LE L+ + L+ K G+ ++ P IV S + CGFQPR N Q+Y++
Sbjct: 231 YLLDEAAQLEQALVQYALAVATKHGWRQVSPPSIVYSHMASACGFQPRDQNGEQQIYALA 290
Query: 293 GADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
+ L GT+EIP+ + D+ L S LP+K A S C+R EAGA G T+
Sbjct: 291 QSQDDVERGKPELSLAGTSEIPLAAMKSDTTLDASELPMKRVAVSRCYRAEAGARGANTK 350
Query: 344 GLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+EMF + P +E+ EE++ I+ ++ SLGLH ++L
Sbjct: 351 GLYRVHEFTKVEMFAWTSPDADETGDVFEEMLDIQTEILGSLGLHCRVL 399
>gi|389638232|ref|XP_003716749.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351642568|gb|EHA50430.1| seryl-tRNA synthetase [Magnaporthe oryzae 70-15]
Length = 536
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 182/358 (50%), Gaps = 39/358 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANI--RNRNSNANLELVLE-LYEKMLNVQKEVDRLREERNAVA 128
KA ID K IR N N RN S + + + L+E+ Q+E LRE N +
Sbjct: 65 KAVIDLKHIRQNPALYEQNCVERNYKSQSTYPVRINALFEQWHERQREGRTLRERSNLLR 124
Query: 129 NKMKG--------------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ L R++L+EEGK LK+ L ++E+ +L DE+
Sbjct: 125 RQLANPSASLTEAPDPRFQDLTNMSREELLEEGKRLKDQLSSIEDSEARLEDEMHSLGLA 184
Query: 175 IPNMTHPDVPVGGEDC--SIIRKTVGNPSVF-------NFPVKDHFQLGKALDIFDFDAA 225
+PN+T P G E S I +P+ + + H +G L I DF A
Sbjct: 185 LPNLTSTSTPRGSEPLVLSYINVENDDPTALLESTGKSDRVWRSHVHIGSELGIMDFAGA 244
Query: 226 AEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN 285
A SG +YYL E LE L+ + L+ + G+T ++ P IV S + CGFQPR N
Sbjct: 245 ATASGWGWYYLVGEGAALEQALVQYALAVATRHGWTQVSPPSIVYSHIAGACGFQPRDHN 304
Query: 286 --TQVYSIEGA---------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTE 334
TQ+Y++ + + CL TAEIP+ G+ D+ L ES L ++ A S C+R E
Sbjct: 305 GETQIYNLAQSASDAERGRPELCLAATAEIPLAGMKADTQLEESELSMRRVAVSRCYRAE 364
Query: 335 AGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
AGA G T+GLYRVH+F+K+EMF + P+ES++ +E++ I+ ++ +LGL ++L
Sbjct: 365 AGARGVDTKGLYRVHEFTKVEMFAWTSPDESETLDVFDEMLDIQTEILGALGLSCRVL 422
>gi|269976029|ref|ZP_06183033.1| seryl-tRNA synthetase [Mobiluncus mulieris 28-1]
gi|307700484|ref|ZP_07637520.1| serine--tRNA ligase [Mobiluncus mulieris FB024-16]
gi|269935857|gb|EEZ92387.1| seryl-tRNA synthetase [Mobiluncus mulieris 28-1]
gi|307614291|gb|EFN93524.1| serine--tRNA ligase [Mobiluncus mulieris FB024-16]
Length = 435
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 176/323 (54%), Gaps = 7/323 (2%)
Query: 73 AAIDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
A ID + +++N E + A+ R R N A ++ + +K L + + R E+ A + ++
Sbjct: 10 AMIDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLEALQAFENARAEQKAFSKQI 69
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
GK ER L+EE K + E + TLEE + +Q A + N VP GGED
Sbjct: 70 -GKASKEERPALLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGEDDY 128
Query: 192 IIRKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ G P + F KDH LG LD D D +VSGS+FYYLK LE+ +
Sbjct: 129 EVLSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLELAI 188
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+N + I GFTP+ TP +V + + GF ++ ++Y + D L GT+E+ +
Sbjct: 189 LNAAIDTAIAHGFTPMITPCMVSPATMSGTGFLGEHSD-EIYYLPADDLYLTGTSEVALA 247
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G H D I+ S P +Y+ +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PEES
Sbjct: 248 GYHTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEESVE 307
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
H++L+ +E ++ + + L ++++
Sbjct: 308 EHQKLLNMEREMLAKVELPYRVI 330
>gi|386856474|ref|YP_006260651.1| seryl-tRNA synthetase [Deinococcus gobiensis I-0]
gi|380000003|gb|AFD25193.1| Seryl-tRNA synthetase [Deinococcus gobiensis I-0]
Length = 430
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 168/294 (57%), Gaps = 3/294 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N AV I + + +L +L L ++ +++ V+ ++ ERNA A K+ +
Sbjct: 2 LDLKFIRENAGAVQRAIEVKRVSLDLNELLRLDRDLVALKQRVEAMQTERNANA-KLVPR 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P ER LI++GK+L E L LE L ++L+ +PN+ H VP+G +D +
Sbjct: 61 ATPEERSALIQKGKDLAEELKALEPALRAHDEQLRHLLLRVPNIPHATVPIGADDGDNVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G P F F DH +L + D + A VSGS+ Y LK EA +LEM ++ + L
Sbjct: 121 LRREGTPPEFAFTPLDHVELLERQGWSDPERVARVSGSRSYLLKGEAALLEMAVLMFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ RG TPL+T +VR + G P G QVY IEG D L GTAE+PV ++
Sbjct: 181 FLNGRGLTPLSTTALVRPETLMASGHFP-GGEDQVYKIEGDDLMLAGTAEVPVNSLYAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
L+ LPL +AA S FR+EAG+AG RGL RVH+F K+E +V C+ +E+++
Sbjct: 240 QLAGETLPLAFAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVICRADEAEA 293
>gi|400293291|ref|ZP_10795167.1| serine--tRNA ligase [Actinomyces naeslundii str. Howell 279]
gi|399901532|gb|EJN84411.1| serine--tRNA ligase [Actinomyces naeslundii str. Howell 279]
Length = 466
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 189/357 (52%), Gaps = 12/357 (3%)
Query: 42 RLLARAFSAPALQTIDTTDNKGGV--AVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNAN 99
R+L PA + + + G AV + ID + +R+N E A+ R R ++ +
Sbjct: 7 RILLDRLRRPAEGRLRSEGDPGAAFGAVLTTLRGMIDLRALRENPEPFRASQRARGADVD 66
Query: 100 L-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLE 158
L + V+ E + LR E+ AV+ + GK P ER ++ K L E + E
Sbjct: 67 LVDRVIAADETRRQALAAFENLRAEQKAVSRSV-GKASPEERPAILASAKELAEQVKAAE 125
Query: 159 EDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSIIRKTVGNPSVFN---FPVKDHFQLG 214
+L A+ N+ P GGE D ++R G P F+ F DH +G
Sbjct: 126 SASSAAAADLDALARQFANLIE-GAPSGGEEDYVVLRHEGGEPRDFDAEGFEPADHLAIG 184
Query: 215 KALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVV 274
+ LDI D A+VSG++FYYLK + LE+ L+ L + GFTP+TTP +V V+
Sbjct: 185 EGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMTAALDAAVAHGFTPMTTPTLVTPQVM 244
Query: 275 EKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRT 333
GF GA++ ++Y + D L GT+E+ + G H D IL S P +Y +S C+R
Sbjct: 245 GGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAGYHADEILDLSAGPKRYMGWSTCYRR 302
Query: 334 EAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EAGAAG TRG+ RVHQF+K EMF +C+PE++++ H L+ +EE++ + + L ++++
Sbjct: 303 EAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAEHARLLAMEEEMLALVELPYRVI 359
>gi|302901853|ref|XP_003048525.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729458|gb|EEU42812.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 499
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 183/351 (52%), Gaps = 34/351 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR N + RN N +LEL+ K ++Q++ LRE N +
Sbjct: 36 KPIVDIKEIRQNPDLYQQTCVERNYRRQAQNPAQILELHAKWQDLQRQGRALRERSNLLR 95
Query: 129 NKMKGKLEPSE-----------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++ S+ R+++ EE + LK+ L +E+ + ++++ A +PN
Sbjct: 96 RQLANPATSSDDEDLKEVKQLTREQIQEEARTLKQQLSMIEKGESQAVTKMEELALELPN 155
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD-----HFQLGKALDIFDFDAAAEVSGSK 232
+THPD P G D + + +P +F +D H +G L IFDF AA SG
Sbjct: 156 LTHPDTPKG--DQPEVLSYINDPPIFQESPEDKIWRSHVHIGSELGIFDFAGAATASGWG 213
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYS 290
+YYL EA LE L+ + L+ + G+T + P +V S + CGFQPR N QVY+
Sbjct: 214 WYYLLGEAAQLEQALVQYALAVATRHGWTQVAPPSMVYSHIGAACGFQPRDQNGEQQVYT 273
Query: 291 IEGA---------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
I + + CL GT+EI + G+ ++ + LPLK A S C+R EAGA G
Sbjct: 274 ISQSAEDIERGVPEMCLTGTSEIALAGMKANTTIDPEDLPLKRVAVSRCYRAEAGARGAD 333
Query: 342 TRGLYRVHQFSKLEMFVFCQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+EMF + +E + +E++ ++ ++ SSLGL+ ++L
Sbjct: 334 TKGLYRVHEFTKVEMFAWTAADEDLAQDLFDEMLDMQTEILSSLGLYCRIL 384
>gi|46117084|ref|XP_384560.1| hypothetical protein FG04384.1 [Gibberella zeae PH-1]
Length = 502
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 34/351 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K IR + E RN N +LEL+ + ++Q++ LRE N +
Sbjct: 39 KPIVDIKHIRQHAELYQQTCVERNYRKQAQNPAKILELHARWQDLQRQGRALRERSNLLR 98
Query: 129 NKMKGKLEPS-----------ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
++ S R+++ +E + LK+ L +E+ + ++++ A +PN
Sbjct: 99 RQLANPATSSGDEDLKEVRQLTREQIQDEARQLKQDLSAIEKGESQSVTQMEELALELPN 158
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD-----HFQLGKALDIFDFDAAAEVSGSK 232
+THPD P G E + + +P +F +D H +G L +FDF AA SG
Sbjct: 159 LTHPDTPKGSE--FEVMSYINDPPIFKESPEDKIWRSHVHIGSELGLFDFAGAATASGWG 216
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR--GANTQVYS 290
+YYL EA LE LI + L+ + G+T ++ P +V S + CGFQPR QVY+
Sbjct: 217 WYYLLGEAAQLEQALIQFALATATRHGWTQVSPPSMVYSHIGAACGFQPRDVSGEQQVYT 276
Query: 291 I----EGADQ-----CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
I E A++ CL GT+EI + G+ ++ + LPLK A S C+R EAGA G
Sbjct: 277 IAQSAEDAERGVPEMCLTGTSEIALAGMKANTTIDPEDLPLKRVAVSRCYRAEAGARGAD 336
Query: 342 TRGLYRVHQFSKLEMFVFCQPEE--SDSYHEELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+EMF + P++ + +E++ ++ ++ SSLGLH ++L
Sbjct: 337 TKGLYRVHEFTKVEMFAWTAPDQDAAQDIFDEMLDMQTEILSSLGLHCRIL 387
>gi|440479323|gb|ELQ60095.1| seryl-tRNA synthetase synthetase [Magnaporthe oryzae P131]
Length = 506
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 182/358 (50%), Gaps = 39/358 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANI--RNRNSNANLELVLE-LYEKMLNVQKEVDRLREERNAVA 128
KA ID K IR N N RN S + + + L+E+ Q+E LRE N +
Sbjct: 35 KAVIDLKHIRQNPALYEQNCVERNYKSQSTYPVRINALFEQWHERQREGRTLRERSNLLR 94
Query: 129 NKMKG--------------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
++ L R++L+EEGK LK+ L ++E+ +L DE+
Sbjct: 95 RQLANPSASLTEAPDPRFQDLTNMSREELLEEGKRLKDQLSSIEDSEARLEDEMHSLGLA 154
Query: 175 IPNMTHPDVPVGGEDC--SIIRKTVGNPSVF-------NFPVKDHFQLGKALDIFDFDAA 225
+PN+T P G E S I +P+ + + H +G L I DF A
Sbjct: 155 LPNLTSTSTPRGSEPLVLSYINVENDDPTALLESTGKSDRVWRSHVHIGSELGIMDFAGA 214
Query: 226 AEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN 285
A SG +YYL E LE L+ + L+ + G+T ++ P IV S + CGFQPR N
Sbjct: 215 ATASGWGWYYLVGEGAALEQALVQYALAVATRHGWTQVSPPSIVYSHIAGACGFQPRDHN 274
Query: 286 --TQVYSIEGA---------DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTE 334
TQ+Y++ + + CL TAEIP+ G+ D+ L ES L ++ A S C+R E
Sbjct: 275 GETQIYNLAQSASDAERGRPELCLAATAEIPLAGMKADTQLEESELSMRRVAVSRCYRAE 334
Query: 335 AGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
AGA G T+GLYRVH+F+K+EMF + P+ES++ +E++ I+ ++ +LGL ++L
Sbjct: 335 AGARGVDTKGLYRVHEFTKVEMFAWTSPDESETLDVFDEMLDIQTEILGALGLSCRVL 392
>gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166201242|sp|A4XJH1.1|SYS_CALS8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 420
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 182/321 (56%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL EK + EV++++ +N + ++ K
Sbjct: 2 LDLKFIRSNPEKVQEGLNKRNKDISIAPILELDEKRRKLLAEVEKMKAIQNQKSKEIPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + +L+ E K L + + L+ + ++ DE+++ IPN+ H VP+G +D +
Sbjct: 62 KKEGKDTTELMNELKELSDKIKELDSQVKEVEDEIEKILLTIPNIPHESVPIGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P V +F +K H+++G+ L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGEPRVPDFEIKPHWEIGEKLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+ L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYVELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKHLGLPYRVVLL 320
>gi|323141849|ref|ZP_08076713.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413689|gb|EFY04544.1| serine--tRNA ligase [Phascolarctobacterium succinatutens YIT 12067]
Length = 426
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 190/320 (59%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N + V +++RN + +L LEL ++ + ++V+ L++ERN + ++ GK
Sbjct: 2 LDLKFVRENPKLVEEAVKSRNGSLDLTEFLELDKQRREITQQVEALKKERNTASQEI-GK 60
Query: 135 LEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED-CS 191
L+ + + + + + L + + +++L ++ ++++ IPN+ DVPVG +D C+
Sbjct: 61 LKKAGQDAAEQMAAVRALGDKIAADDKELKEIEEKIKSILLTIPNVPAEDVPVGKDDTCN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ +T G P+ F+F K H+ +G+ L I DF+ +VSG+++ + + LE +IN+
Sbjct: 121 PVIRTWGEPTKFDFEPKAHWDIGENLGILDFERGVKVSGARYVFYRGMGSRLERAVINFF 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L K G+T P IV + ++ G P+ A +Y +E D LI TAE+PV H
Sbjct: 181 LDVHTRKHGYTEFFPPFIVNGASMQGTGQLPKFAE-DMYKLENGDMYLIPTAEVPVTNYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL+ LPLKY A+S CFR EAGAAG TRGL R+HQF+K+E+ F +PEES + +
Sbjct: 240 RDDILTGDELPLKYTAYSACFRAEAGAAGRDTRGLIRMHQFNKVELVKFTKPEESWAELD 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E++ LGL + ++
Sbjct: 300 KLTNDAEEVLQLLGLPYHVV 319
>gi|119714441|ref|YP_921406.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
gi|166222755|sp|A1SD34.1|SYS_NOCSJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119535102|gb|ABL79719.1| seryl-tRNA synthetase [Nocardioides sp. JS614]
Length = 424
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 168/325 (51%), Gaps = 16/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLRE--ERNAVANKMK 132
ID + +RD + V A R L E+ + L+ E R E K
Sbjct: 2 IDPRVLRDEPDRVRAAQVKRG------LSDEVVDHALSADGERRRAIAAFEAKRAEQKQL 55
Query: 133 GKLEPS----ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
GKL P E+Q L+ + K L + E + Q IPN+ + P GGE
Sbjct: 56 GKLIPQAQGEEKQALLAQTKTLAAEVKQAEAAQAVAEEAWQAALMSIPNLAADEAPAGGE 115
Query: 189 DCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
D ++ + +G P F F +DH +LG+ L D D A+VSGS+FY+L LE+
Sbjct: 116 DDYVVLEEIGTPRDFAADGFEPRDHIELGRMLGAIDLDRGAKVSGSRFYFLTGAGAELEL 175
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
L+N + + + GFTP+ P +V+ ++ GF + A+ VY IEG D L+GT+E+P
Sbjct: 176 ALVNLAMQQARESGFTPVIAPSMVKPRAMDGTGFLGQAAD-DVYRIEGQDMYLVGTSEVP 234
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ H D IL LPL+YAAFS CFR EAG+ G T+G+ RVH F K+EMFV+ EES
Sbjct: 235 MAAYHSDEILDGGALPLRYAAFSPCFRKEAGSHGKDTKGIIRVHWFDKVEMFVYTTTEES 294
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ H+ L+ E++ L L ++++
Sbjct: 295 YAEHQRLLAWEKEFLEKLELAYRVI 319
>gi|320161762|ref|YP_004174987.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319995616|dbj|BAJ64387.1| seryl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 424
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 180/318 (56%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D R+ + V +R+R ++ ++ V+EL ++ V+ L+ ERNAV+ ++
Sbjct: 2 LDINLFRETPDVVREALRHRQMDDSVVDRVIELDQQRRANLTRVEALKAERNAVSKEIGK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+P+ERQ IE + + + + L+E + K+ +EL+ IPN+ P++PVG E +
Sbjct: 62 TKDPAERQAKIEAMRQVGDEITALDEAVRKIEEELESTLAQIPNLPLPEIPVGESEHQNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ KTVG P F+F H++LG L I DF+ +++GS+FY L L+ LI W L
Sbjct: 122 VIKTVGTPKTFDFTPLPHWELGPKLGILDFERGVKITGSRFYVLSGAGARLQRALIAWML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
I++G+ P +V+ + G P+ + + IE D ++ TAE+P+ G+HM
Sbjct: 182 DLHIRQGYREAYLPFMVKGDTLYASGQLPKFRDNLYHDIE-EDLWMVPTAEVPLTGLHMG 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
+L E LPL+Y A++ CFR E +AG RG+ R HQF K+EM+++ +PE+S +++
Sbjct: 241 EVLDEKQLPLRYTAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYIYSKPEDSMKELQKM 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E + LGL ++++
Sbjct: 301 LADAEQTCAELGLAYRVV 318
>gi|225181881|ref|ZP_03735316.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167395|gb|EEG76211.1| seryl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 426
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 181/320 (56%), Gaps = 4/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++RDN + V + ++ A ++ E+ EK ++ EV++L+++RN V+ ++ +
Sbjct: 2 LDLKFVRDNLDVVRKALDDKGEEAAIDQFAEVDEKRRSLLHEVEQLKQKRNKVSEQVAQM 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + +IEE + + + + ++ D+ + DELQQ +PN+ H DVPVG E+ ++
Sbjct: 62 KRSGEDASGVIEEMRAVSQKIKEMDNDVRNVDDELQQILLTLPNIPHKDVPVGQTEEENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P+ F+F K H+ + LDI DF+ A +V+G++F + K + LE LIN+ L
Sbjct: 122 AVRHFGEPTTFDFEAKPHWDIAANLDIIDFERAGKVTGTRFAFYKGQGAQLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + G+T + P +V + G P+ + + D LI TAE+PV +H
Sbjct: 182 DLHITEHGYTEIFPPFMVHRESMVGTGQLPK-FEEDAFRVADTDYFLIPTAEVPVTNLHR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ I +E LP Y A+S CFR EAGA G TRGL R HQF+K+E+ F +P++S E
Sbjct: 241 EEIFTEEDLPKHYVAYSACFRAEAGAHGRDTRGLIRQHQFNKVELVKFARPQDSMQELET 300
Query: 372 LIRIEEDLYSSLGLHFKLLL 391
L E++ LGL ++ +L
Sbjct: 301 LTANAEEILKRLGLPYQTML 320
>gi|302520443|ref|ZP_07272785.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
gi|302429338|gb|EFL01154.1| LOW QUALITY PROTEIN: seryl-tRNA synthetase [Streptomyces sp. SPB78]
Length = 348
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 177 NMTHPDVPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKF 233
N+ HPDVPVGGE+ + +T G F F KDH +LG L D + AA+VSGS+F
Sbjct: 23 NLVHPDVPVGGEEDFALLETHGTIRDFEAEGFAPKDHLELGHLLGAIDVERAAKVSGSRF 82
Query: 234 YYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEG 293
YYL +LE+ L+N +++ GFTP+ TP +VR ++ GF + A VY ++
Sbjct: 83 YYLSGIGALLELALVNAAIAQATAAGFTPMLTPALVRPQAMDGTGFLGQ-AGQDVYHLKD 141
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
D L+GT+E+ + G HMD I+ LPL+YA FS CFR EAG+ G TRG++RVHQF K
Sbjct: 142 DDLYLVGTSEVALAGYHMDEIIEADRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDK 201
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+EMF + PE+S++ H L+ E+ +SLGL F+++
Sbjct: 202 VEMFTYVAPEDSEAEHRRLLEWEKQWLTSLGLPFRVI 238
>gi|355571231|ref|ZP_09042483.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
gi|354825619|gb|EHF09841.1| Seryl-tRNA synthetase [Methanolinea tarda NOBI-1]
Length = 425
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 185/321 (57%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEK---MLNVQKEVDRLREERNAVANKM 131
+D ++IR+N E V A++R R + ++ +V +L EK ++ E+D+LR+ RN++A ++
Sbjct: 2 LDIRFIRENPEVVRADLRRRGRDGDVRMVDDLLEKDRRSRTLKVEIDKLRQRRNSIAREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + + L++E L E + LE + L+ E+ +PN+ H VP+G +D
Sbjct: 62 NEARKAGRDTSDLLQEASRLPEKIKELESVIESLSSEITGVLMSLPNILHESVPIGRDDS 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + VG P F+FP+++H +L DF+ AA +G+ FYYLK V+L++ L
Sbjct: 122 ENLELRRVGTPRTFDFPLRNHGELAAECGWADFERAARAAGAGFYYLKGSLVLLDLALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + + K+GF P+ P ++ S E N +Y IE D LI T+E P+ +
Sbjct: 182 FAIDLLTKKGFIPVIPPYMMNRSSYEGVTDLADFENV-MYKIEDDDAYLIATSEHPLCAM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ D I E LPL+ S CFR E G+ G T+GL+RVHQF K+E FVFC+PEES H
Sbjct: 241 YQDEIFEERDLPLRLCGVSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVFCRPEESWDIH 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L+ E++Y+ LGL ++++
Sbjct: 301 EQLLAHAEEIYTLLGLPYRVV 321
>gi|350585179|ref|XP_003481897.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Sus scrofa]
Length = 405
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 171/304 (56%), Gaps = 15/304 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKG--------KLEPSER-QKLIEEGKN 149
+L ++ ++++ +Q+++ L EE+ AVA ++ +++ R Q L G+
Sbjct: 85 DLPAIISTWQELRQLQEQIQSLEEEKRAVAEAVRALVVTQDNDQVQQDPRYQSLRARGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ LV L +L + A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLVLLYPKEAQLEEWFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H QL + LDI + VSG + YYL+ +L+ GL+N+TL ++I RGFTP+T P+++
Sbjct: 205 HLQLAENLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLQKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFK 388
LHF+
Sbjct: 384 LHFR 387
>gi|306817420|ref|ZP_07451165.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
gi|304649861|gb|EFM47141.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
Length = 425
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +++N E + A+ R R N A ++ + +K L + + R E+ A + ++ G
Sbjct: 2 IDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLETLQAFENARAEQKAFSKQI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+EE K + E + TLEE + +Q A + N VP GGED +
Sbjct: 61 KASKEERPALLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGEDDYEV 120
Query: 194 RKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
G P + F KDH LG LD D D +VSGS+FYYLK LE+ ++N
Sbjct: 121 LSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLELAILN 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ I GFTP+ TP +V + + GF ++ ++Y + D L GT+E+ + G
Sbjct: 181 AAIDTAIAHGFTPMITPCMVSPATMSGTGFLGEHSD-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D I+ S P +Y+ +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PEES H
Sbjct: 240 HTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEESVEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E ++ + + L ++++
Sbjct: 300 QKLLNMEREMLAKVELPYRVI 320
>gi|117929311|ref|YP_873862.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|166200590|sp|A0LWR6.1|SYS_ACIC1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|117649774|gb|ABK53876.1| seryl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 420
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 167/317 (52%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ E + A+ R R + L + L E + LR E+ A+ ++
Sbjct: 2 IDLRLLRDDPERLRASQRARGEDPGLVDAALAADENRRAAVARFEALRAEQKALGRRI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P E+ L++ K L E + E ++ I N+ + P GGE+ ++
Sbjct: 61 SAPPDEKPALLDRAKELAELVKAAEAARDDADAACREALLAISNLVDDEAPRGGEEDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +G P F+FP +DH +LG+ L D + AA+VSGS+FYYL +LE L++ L
Sbjct: 121 LEEIGTPPTFSFPPRDHLELGERLGAIDVERAAKVSGSRFYYLTGVGALLEFALVDLALR 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF P+ P +VR +E GF + A V+ +E D L+GT+E+ + HM
Sbjct: 181 QAVTAGFVPVIPPVLVRPPAMEGTGFLGQAAEN-VFHLEKDDFYLVGTSEVSLAAYHMGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + LP +Y FS CFR EAG+ G TRG+ RVHQF K+EMF F E+ + H L+
Sbjct: 240 ILDAAQLPRRYVGFSTCFRREAGSHGKDTRGIIRVHQFDKVEMFSFTTVGEAAAEHRRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+ ++L + F+++
Sbjct: 300 EWEKQFLTALEIPFRVI 316
>gi|227876462|ref|ZP_03994574.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
gi|227843003|gb|EEJ53200.1| serine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
Length = 425
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +++N E + A+ R R N A ++ + +K L + + R E+ A + ++ G
Sbjct: 2 IDMRLMKENPEPMRASQRARGNDPATVDAAIAADDKRLEALQAFENARAEQKAFSKQI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+EE K + E + TLEE + +Q A + N VP GGED +
Sbjct: 61 KASKEERPALLEEAKRMSEKVKTLEEAANEAATAAKQAAMVLENQILDGVPSGGEDDYEV 120
Query: 194 RKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
G P + F KDH LG LD D D +VSGS+FYYLK LE+ ++N
Sbjct: 121 LSQEGTPIRDFAAEGFKPKDHLDLGLGLDAIDTDRGVKVSGSRFYYLKGVGARLELAILN 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ I GFTP+ TP +V + + GF ++ ++Y + D L GT+E+ + G
Sbjct: 181 AAIDTAIAHGFTPMITPCMVSPATMSGTGFLGEHSD-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D I+ S P +Y+ +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PEES H
Sbjct: 240 HTDEIIDLSAGPKRYSGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCRPEESVEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E ++ + + L ++++
Sbjct: 300 QKLLNMEREMLAKVELPYRVI 320
>gi|326772773|ref|ZP_08232057.1| serine--tRNA ligase [Actinomyces viscosus C505]
gi|326637405|gb|EGE38307.1| serine--tRNA ligase [Actinomyces viscosus C505]
Length = 426
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ +L + V+ E + LR E+ V+ + G
Sbjct: 2 IDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKQVSRSV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L E + E EL A+ N+ P GGE D +
Sbjct: 61 KASPEERPAILANAKELAEQVKAAEAASSTAAAELDDLARQFANLIE-GAPSGGEEDYVV 119
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH +G+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 120 LRHEGGRPRDFAAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 180 AALDAAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE++++
Sbjct: 238 YHADEILDLSAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H L+ +EE++ + + L ++++
Sbjct: 298 HARLLAMEEEMLALVELPYRVI 319
>gi|395859780|ref|XP_003802210.1| PREDICTED: serine--tRNA ligase, mitochondrial [Otolemur garnettii]
Length = 662
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 172/289 (59%), Gaps = 7/289 (2%)
Query: 107 YEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTD 166
++++ +++++ L EE+ + ++ L+P + Q L G+ +++ LV L +L +
Sbjct: 247 WQELKQLREQIQSLEEEKKTITEAVRALLDP-QYQGLRAHGREIRKQLVLLYPKEAQLEE 305
Query: 167 ELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAA 226
++ +A +PN THPDVPVG E + + VG+ F+F + H ++G+ LDI +
Sbjct: 306 QVYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRGHLEIGEKLDIIRQKRLS 365
Query: 227 EVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT 286
VSG + YYL+ +L+ GL+N+TL++++++GFTP+T P+++R +V E CG P +
Sbjct: 366 HVSGHRSYYLRGAGALLQHGLVNFTLNKLVQQGFTPMTVPDLLRGAVFEGCGMTPNANPS 425
Query: 287 QVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
Q+Y+I+ + D L GTAE+ + G MD ++ LP++ S C+R E G
Sbjct: 426 QIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETD-TGKEPW 484
Query: 344 GLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++L
Sbjct: 485 GLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVL 533
>gi|409083801|gb|EKM84158.1| hypothetical protein AGABI1DRAFT_67420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 468
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 182/336 (54%), Gaps = 22/336 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLEL---YEKMLNVQKEVDRLREERNAVANKM 131
+D+ I N + +N R + ++ V L Y + + + ++ +R E+N + ++
Sbjct: 1 MDYASITQNLDTRISNALARKAPIDVAAVSSLSILYTQYKDHLRSINSIRAEQNTLGVEI 60
Query: 132 ----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K K P +R +L++ K+LK L E+ L L L + PN THP P+G
Sbjct: 61 QVAAKAKDIP-KRDELLDRAKSLKSTLFEREKTLSGLEHRLLALSLTFPNDTHPQSPLGP 119
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E + T G + ++H + K ++ DF++ A V+GS +YYL NEA +LEM L
Sbjct: 120 EPNAKTISTHGPTPLPPSSSRNHLSISKKFNLLDFESGAIVTGSSWYYLLNEAAILEMAL 179
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---GANTQVYSIEG----------A 294
+N+ LS ++ GF P+TTP++VR+ + +CGF PR GA +Q+Y I
Sbjct: 180 VNYALSVAVRAGFVPVTTPDVVRADIAARCGFTPREQGGAASQMYHIANHHIPSSQSPPP 239
Query: 295 DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
+ L GTAEIP+ G+ + I + LPLK+ FR+EAGA+ +RGLYRVHQF+K+
Sbjct: 240 ELVLAGTAEIPLAGLFANKIYPSNQLPLKFVGVGRSFRSEAGASAE-SRGLYRVHQFTKV 298
Query: 355 EMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+F ++S+ E + +++ + LGL F++L
Sbjct: 299 ELFALTPEDQSEEMMERIKDVQKSILEGLGLSFRIL 334
>gi|453379352|dbj|GAC85842.1| serine--tRNA ligase [Gordonia paraffinivorans NBRC 108238]
Length = 419
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 184/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L + +LE + + E D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRASQRARGEDPGLVDALLEADAERRSAIVEADTLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + I N+ P P GGED ++
Sbjct: 61 KAQGEEKQALLAKGKELAEKVKAAVARQAEAEAATARAHRAISNIVAPQAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P KDH +LG++L + D + A+VSGS+FY+L + L++GL+N
Sbjct: 121 LEHVGEVREIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GF + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KAAANGFQLMIPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAEAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 299 LNWEKEMLAAIDVPYRVI 316
>gi|359775828|ref|ZP_09279150.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
gi|359306844|dbj|GAB12979.1| seryl-tRNA synthetase [Arthrobacter globiformis NBRC 12137]
Length = 445
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 177/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ L + +++ + LR E+NA K+
Sbjct: 21 IDVKDLSENPDKFRASQRARGADETLVDAIIDADAARRTALISFENLRAEQNAFGKKV-A 79
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E + L + + + ++ + IPN+ VP GGED ++
Sbjct: 80 QAKGEEKQALLAEVRELAGAVKAASAEADAAQAKQEELLRTIPNLIEDGVPAGGEDDYVV 139
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F +DH ++G+ + D + A+VSG++FY+L+ LEM L+ +
Sbjct: 140 VKTVGTPREFPDFEPRDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAM 199
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+P+ G H D
Sbjct: 200 EQAIEAGFIPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVPLAGYHAD 258
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P+++A S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + HE L
Sbjct: 259 EILDLSAGPIRFAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHERL 318
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE + + L ++++
Sbjct: 319 LAWEEQMLAKCELPYRVI 336
>gi|161986627|ref|YP_249893.2| seryl-tRNA synthetase [Corynebacterium jeikeium K411]
gi|260578616|ref|ZP_05846525.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
gi|258603244|gb|EEW16512.1| serine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
Length = 424
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++RDN + + R R + A ++ +LE + D R ++ A + +M
Sbjct: 2 IDLKFLRDNPDVARESQRTRGEDPALIDQLLEADSQRREAISAADAARADQKAFSKEMGQ 61
Query: 134 KLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K+ + E+ L EEGK E + LEE + I N+ P GGE+
Sbjct: 62 KMRSASDEEKLALREEGKQKAEAVKKLEEAQSSAEQAVHDLQMQISNIVEEGAPAGGEED 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F+F KDH +LG++L + D +VSG++FY+L + +L++G++
Sbjct: 122 FVTLDVVGEPPQFDFEPKDHLELGESLGLIDMKRGTKVSGARFYFLTGDGALLQLGMLQL 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++ GF + P +VR ++ GF A+ ++Y +E D L+GT+E+ + G H
Sbjct: 182 AAQKAVEHGFKLMIPPVLVRPEIMSGTGFLGAHAD-EIYHLEEDDMYLVGTSEVALAGYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PEE+ H+
Sbjct: 241 SEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEEATEVHQ 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
EL+ +E ++ ++ + ++++
Sbjct: 301 ELLAMEREMLGAIEVPYRVI 320
>gi|380478383|emb|CCF43633.1| seryl-tRNA synthetase [Colletotrichum higginsianum]
Length = 497
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 184/349 (52%), Gaps = 30/349 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREE----R 124
K ID + IR+N + N +RN + + + E++ + +QK+ +RE R
Sbjct: 37 KPIIDIRHIRENAKLHEENCIDRNYAVQSKSPARINEIFAQWQALQKDSRAVRERSNLLR 96
Query: 125 NAVANKMKG-------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+AN K++ R++L+ E + LK+ L +E+D +L +E++ A IPN
Sbjct: 97 RQIANPASSRDDADLVKMKERSREELLAEARELKQKLTAVEQDEARLVEEMEALALGIPN 156
Query: 178 MTHPDVPVGGED---CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
+T P+G E I PS + + H +G L + DF AA SG +Y
Sbjct: 157 LTSEATPIGDEPQLLSYINEHPAVIPSASDKVWRSHVHIGSELGLLDFAAAGNTSGWGWY 216
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIE 292
YL +EA LE L+ + L+ + G+ + P IV S + CGFQPR N Q+Y++
Sbjct: 217 YLLDEAAQLEQALVQYALAVATRHGWRQVAPPSIVYSHIGSACGFQPRDQNGEQQIYALA 276
Query: 293 ----GADQ-----CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
AD+ L GT+EIP+ G+ ++ L S LP+K A S C+R EAGA G T+
Sbjct: 277 QSQADADRGKPELSLAGTSEIPLAGMKAETTLDASELPMKRVAVSRCYRAEAGARGANTK 336
Query: 344 GLYRVHQFSKLEMFVFCQPE--ESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+EMF + P+ E+ EE++ I+ ++ SLGLH ++L
Sbjct: 337 GLYRVHEFTKVEMFAWTPPDVGETIDIFEEMLDIQTEILGSLGLHCRIL 385
>gi|226355386|ref|YP_002785126.1| seryl-tRNA synthetase [Deinococcus deserti VCD115]
gi|226317376|gb|ACO45372.1| putative serine--tRNA ligase (Seryl-tRNA synthetase) [Deinococcus
deserti VCD115]
Length = 425
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 182/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IR+N V I + N +L+ +L L ++ ++ V+ ++ ERNA A K+ K
Sbjct: 2 LDLRFIRENAGVVRRAIEVKGVNLDLDELLALDRELTAQKQRVEAMQAERNANA-KLVPK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P+ER LI++GK+L + L E L ++L+Q +PN+ HP VPVG +D +
Sbjct: 61 ATPAERPALIQKGKDLGDELKAQEPALRAQEEQLRQLLLRVPNIPHPGVPVGKDDTDNVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G VF+ P DH +L + D + A VSGS+ Y LK EAVMLEM ++ + L
Sbjct: 121 LRREGQVPVFSTPPLDHVELLEKQGWSDPERVARVSGSRSYLLKGEAVMLEMAVLTFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ RGFTPL+T + R G P G QVY I+G + L GTAE+PV ++
Sbjct: 181 FLSARGFTPLSTTALARPETFVGSGHFP-GGEDQVYKIDGDELMLAGTAEVPVNSLYAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS--YHEE 371
L LP+ YAA S FR+EAG+AG RGL RVH+F K+E +V C+ +E+++ + E
Sbjct: 240 QLPLDALPVTYAAISAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVMCRADEAEALQWFET 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E L +L L ++++
Sbjct: 300 LLANAEGLLQALELPYRVV 318
>gi|284028198|ref|YP_003378129.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
gi|283807491|gb|ADB29330.1| seryl-tRNA synthetase [Kribbella flavida DSM 17836]
Length = 424
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 181/320 (56%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V A + R S A ++ +L + + + LR E+ + ++
Sbjct: 2 IDAKLLRDNPDVVRAALTKRGESPARVDEILVADGERRSSIAAFEALRAEQKGLGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + ER L+E K L + E + Q ++ +PN+ + PVGGE ++
Sbjct: 61 QAKGDERAALLERTKALAAEVKAHEATANEAERRFDQLSRALPNLVSDEAPVGGESDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ +G P F F +DH +LG+ L D + A+VSG++FY+LK L++G++
Sbjct: 121 VEEIGKPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFYFLKGVGAQLQLGMLQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+++ ++ GFTP+ TP +V+ V++ G+ A+ VY ++ + L+GT+E+ + G H
Sbjct: 181 AINQAVEYGFTPMITPTLVKPEVMDGTGYL--NAHDDVYRLQEPELYLVGTSEVSLAGYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD IL S P++YA +S C+R EAG+ G TRG+ RVHQF K+EMF +C E++++ H+
Sbjct: 239 MDEILDLSGGPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFDKVEMFSYCSLEDAEAEHQ 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+++ + L ++++
Sbjct: 299 RLLGWEKEMLDKMELAYRVI 318
>gi|409391472|ref|ZP_11243152.1| seryl-tRNA synthetase [Gordonia rubripertincta NBRC 101908]
gi|403198668|dbj|GAB86386.1| seryl-tRNA synthetase [Gordonia rubripertincta NBRC 101908]
Length = 419
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 183/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R R + L L + + D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRASQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + + I N+ + P GGED ++
Sbjct: 61 KAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVASEAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + L++GL+N
Sbjct: 121 LEHVGEPREIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KAAANGFTLMVPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|68262787|emb|CAI36275.1| serS [Corynebacterium jeikeium K411]
Length = 444
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 7/335 (2%)
Query: 60 DNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVD 118
DN G K ID K++RDN + + R R + A ++ +LE + D
Sbjct: 9 DNYAGEPAK--LNTMIDLKFLRDNPDVARESQRTRGEDPALIDQLLEADSQRREAISAAD 66
Query: 119 RLREERNAVANKMKGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
R ++ A + +M K+ + E+ L EEGK E + LEE + I
Sbjct: 67 AARADQKAFSKEMGQKMRSASDEEKLALREEGKQKAEAVKKLEEAQSSAEQAVHDLQMQI 126
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
N+ P GGE+ + VG P F+F KDH +LG++L + D +VSG++FY+
Sbjct: 127 SNIVEEGAPAGGEEDFVTLDVVGEPPQFDFEPKDHLELGESLGLIDMKRGTKVSGARFYF 186
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
L + +L++G++ + ++ GF + P +VR ++ GF A+ ++Y +E D
Sbjct: 187 LTGDGALLQLGMLQLAAQKAVEHGFKLMIPPVLVRPEIMSGTGFLGAHAD-EIYHLEEDD 245
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
L+GT+E+ + G H + I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E
Sbjct: 246 MYLVGTSEVALAGYHSEEIIDLSNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVE 305
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
MFV+C+PEE+ H+EL+ +E ++ ++ + ++++
Sbjct: 306 MFVYCKPEEATEVHQELLAMEREMLGAIEVPYRVI 340
>gi|227501878|ref|ZP_03931927.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
gi|227077372|gb|EEI15335.1| seryl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
Length = 418
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 184/318 (57%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
ID K +R+N + V A+ R + +L +L+ ++ L +QK D +R ++ ++ K+
Sbjct: 2 IDLKLLRENPDVVRASQVTRGEDPSLVDQLLAADEKRRLAIQK-ADEVRSQQKSLGKKI- 59
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
G+ P ER L+E LK + EE +++ I N+ P GGED +
Sbjct: 60 GQASPEERPALLEGADELKAKVKEAEEARSAAEATVEELQYKIDNVVE-GAPAGGEDDFV 118
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + VG F+F KDH +LG++L + D A+V G++FYYL + L++G++
Sbjct: 119 LVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAA 178
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR ++ GF + ++ ++Y + D+ L+GT+E+ + G H D
Sbjct: 179 QKAREAGFQLMIPPVLVRPEIMSGTGFLGQHSD-EIYYLPADDRYLVGTSEVALAGYHKD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE+++ H++L
Sbjct: 238 EIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEDMHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E+++ +++ L ++ +
Sbjct: 298 LDMEKEMLAAMELPYRTI 315
>gi|410983189|ref|XP_003997924.1| PREDICTED: serine--tRNA ligase, mitochondrial [Felis catus]
Length = 518
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 174/306 (56%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AVA ++ + + + Q L G+
Sbjct: 85 DLPAIISAWQELRQLREQIRSLEEEKGAVAEAVRALMVNRDNTQVQQDPQYQSLRAHGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L+ L +L +E A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLMVLYPKETQLEEEFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I+RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIQRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|329947940|ref|ZP_08294841.1| serine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328523079|gb|EGF50180.1| serine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 426
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 176/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ +L + V+ E + LR E+ AV+ + G
Sbjct: 2 IDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKAVSRSV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L E + E +L A+ N+ P GGE D +
Sbjct: 61 KASPQERPAILASAKELAEQVKAAEAASSAAAADLDALARQFANLIE-GAPSGGEEDYVV 119
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH +G+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 120 LRHEGGEPRDFAAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 180 AALEAAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE++++
Sbjct: 238 YHADEILDLSAGPRRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H L+ +EE++ + + L ++++
Sbjct: 298 HARLLAMEEEMLALVELPYRVI 319
>gi|452001007|gb|EMD93467.1| hypothetical protein COCHEDRAFT_1131813 [Cochliobolus
heterostrophus C5]
Length = 502
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 186/355 (52%), Gaps = 36/355 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLE---LVLELYEKMLNVQKEVDRLREERNAVA 128
K ID K IR N N +RN A+ + ++EL+E+ L +Q+ LRE N +
Sbjct: 38 KPTIDIKHIRQNPGLYEQNCIDRNYGAHSKSSWRIIELHEQWLALQQSSRSLRERNNQLR 97
Query: 129 NKM--------KGKLEPSERQK-LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
K+ G + + QK I + K LKE L ++E ++ DE++ AQ +PN++
Sbjct: 98 AKLARAAVQAKSGDGQSAALQKGTIADAKALKEELSSIEAQETQIQDEIEALAQALPNLS 157
Query: 180 HPDVPVGG--EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
PVG E I + + + K H +G+ L I DF +++ SG +Y+L
Sbjct: 158 STHTPVGTDFEVVGYINAQSESEPLQSQSRKSHVDIGQELGILDFSGSSQTSGWGWYFLV 217
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGAD 295
+ MLE L+ + LS +G+ + P IV S + CGFQPR N Q+Y+IE ++
Sbjct: 218 GDGAMLEQALVQYALSVARNKGWKAVAPPSIVYSHIAAACGFQPRDQNGEQQIYAIEQSE 277
Query: 296 Q-------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRV 348
+ L GTAEIP+ G++ + ++ LPLK S C+R EAGA G T+GLYRV
Sbjct: 278 KDKAKPQLALAGTAEIPLAGMYANHKFEQAELPLKTVGVSRCYRAEAGARGANTKGLYRV 337
Query: 349 HQFSKLEMFVFCQPEE-------------SDSYHEELIRIEEDLYSSLGLHFKLL 390
H+F+K+EMF + P+ +++ +E++RI++++ +LGL ++L
Sbjct: 338 HEFTKVEMFAWTLPDHAGEDYFAGQPASSAEAVFDEMLRIQKEILEALGLQCRIL 392
>gi|402570648|ref|YP_006619991.1| seryl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402251845|gb|AFQ42120.1| seryl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 421
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 184/320 (57%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N E V ++ RN + +L+ L+ E+ + EV+ L+ RN+V+ ++
Sbjct: 2 LDLKYVRNNPEVVKEALQKRNVSISLDHFLQQEEERRKLLFEVETLKARRNSVSEEVGRL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K K E ++ L+ E + + + + LEE + E+++ IPN+ H VP+G ++ +
Sbjct: 62 KKKGEDAD--ALVLEMREVGQTIKELEEKSAGIVGEMEKVLYEIPNIPHTSVPIGSDESA 119
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ +T G P F+F K HF+LG+ LD+FDF AA+V+G++F + K LE LI++
Sbjct: 120 NVQVRTWGTPREFDFEPKAHFELGEKLDVFDFIRAAKVTGARFTFYKGLGAKLERSLISF 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L +G+T + P IV + + G P+ + + + G D LI TAE+PV ++
Sbjct: 180 MLDRHTSKGYTEILPPYIVNRASMTGTGQLPKFED-DAFKVVGTDYFLIPTAEVPVTNLY 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S P+ + A+S CFR+EAG+AG TRGL R HQF+K+E+ F PE+S E
Sbjct: 239 RDEILDGSQFPIHHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFSLPEKSYDELE 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L R E + L L ++++
Sbjct: 299 LLTRDAEGILQDLELPYRVM 318
>gi|334563249|ref|ZP_08516240.1| seryl-tRNA synthetase [Corynebacterium bovis DSM 20582]
Length = 424
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 181/320 (56%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN EAV + R R + L + +L+ + + + D R +NA + +M
Sbjct: 2 IDLKLLRDNPEAVRTSQRTRGEDPELVDRLLDADRRRRDAIADADAARTAQNAFSKEMGT 61
Query: 134 KLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + ER +L EEG+ E L +E + + + N+ P GGED
Sbjct: 62 LMRTASDEERTRLREEGRRKAEALKEIEAVQAEAEAAVNDLQMQLSNVVEEGAPAGGEDD 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + VG P+ F+F KDH LG++L + D +VSG++FY+L + +L++G++
Sbjct: 122 YVVLEHVGEPTTFDFEPKDHVDLGESLGLIDIKRGTKVSGARFYFLTGDGALLQLGMLQL 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ GFT + P +VR ++ GF A+ ++Y +E D L+GT+E+ + G H
Sbjct: 182 AAQKARAAGFTLMIPPVLVRPEIMSGTGFLGAHAD-EIYRLEEDDLYLVGTSEVALAGYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ S P++YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE++ + H
Sbjct: 241 SDEIIDLSDGPVRYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFVYCRPEDAAAQHR 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ +E+++ S++ + ++++
Sbjct: 301 ALLEMEKEMLSAVEVPYRVI 320
>gi|306837119|ref|ZP_07470056.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304566967|gb|EFM42595.1| serine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 418
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 184/318 (57%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
ID K +R+N + V A+ R + +L +L+ ++ L +QK D +R ++ ++ K+
Sbjct: 2 IDLKLLRENPDVVRASQVTRGEDPSLVDQLLAADEKRRLAIQK-ADEVRSQQKSLGKKI- 59
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
G+ P ER L+E LK + EE +++ I N+ P GGED +
Sbjct: 60 GQASPEERPALLEGADELKAKVKEAEEARSAAEATVEELQYKIDNVVE-GAPAGGEDDFV 118
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + VG F+F KDH +LG++L + D A+V G++FYYL + L++G++
Sbjct: 119 LVEEVGEIPHFDFEPKDHLELGESLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAA 178
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GF + P +VR ++ GF + ++ ++Y + D+ L+GT+E+ + G H D
Sbjct: 179 QKAREAGFQLMIPPVLVRPEIMSGTGFLGQHSD-EIYYLPADDRYLVGTSEVALAGYHKD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF KLEMFV+C+PE+++ H++L
Sbjct: 238 EIIDLSNGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEDMHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E+++ +++ L ++ +
Sbjct: 298 LDMEKEMLAAMELPYRTI 315
>gi|441514857|ref|ZP_20996670.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
gi|441450340|dbj|GAC54631.1| seryl-tRNA synthetase [Gordonia amicalis NBRC 100051]
Length = 419
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 181/318 (56%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +RD+ + V + R R + L L + + D LR E+ A+ ++ G
Sbjct: 2 IDLKIVRDDPDLVRTSQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + I N+ P+ P GGED ++
Sbjct: 61 KAQGDEKQALLAKGKELAEQVKAAVARQSAADEAAAEAHRAISNIVAPEAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + L++GL+N
Sbjct: 121 LEHVGEPREIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KAAANGFTLMVPPVLVRPEVMEGTGFLGSHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHRRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|340793171|ref|YP_004758634.1| Seryl-tRNA synthetase [Corynebacterium variabile DSM 44702]
gi|340533081|gb|AEK35561.1| Seryl-tRNA synthetase [Corynebacterium variabile DSM 44702]
Length = 424
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 187/320 (58%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + +L + +LE ++ ++ D R E A + M
Sbjct: 2 IDLKFLRENPDVVRDSQRTRGEDPSLVDQLLEADQRRRDLIAAADTARGEAKAYSRSMGK 61
Query: 134 KLE---PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+++ P ER++L GK L E + +E D ++ I N+ P GGED
Sbjct: 62 QMKDATPEEREQLKARGKELAEAVKKIEADEKDAEQDVHDLQFKISNIV-TGAPAGGEDD 120
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + +G P F+F KDH +LG++L + D + A+VSG++FY+L + +L++ ++
Sbjct: 121 FVVLEHIGTPREFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGDGALLQLAMLQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ ++ GF + P +VR ++ GF A+ ++Y ++ D L+GT+E+ + G H
Sbjct: 181 AARKAVEHGFQLMIPPVLVRPEIMAGTGFLGAHAD-EIYHLDEDDLFLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+ +PE+++ H+
Sbjct: 240 SDEIIDLSEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYAKPEDAEEIHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +E+D+ +++ + ++++
Sbjct: 300 QLLAMEKDMLAAVEVPYRVI 319
>gi|337284432|ref|YP_004623906.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900366|gb|AEH24634.1| seryl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 456
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 191/353 (54%), Gaps = 50/353 (14%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N E V ++ R ++ + LEL + KE++RLR ERN +A
Sbjct: 2 LDIKLIRENPEIVKNDLIKRGELEKVKWIDEILELDKAWREKLKEINRLRHERNKIA--- 58
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQC----IPNMTHPDVP 184
+E +R+K E+ + L + +V EDL K +EL++ +PN+THP VP
Sbjct: 59 ---IEIGKRRKAGEDVEGLLVKSKEIVARIEDLEKEVEELKRRIDYYLWRLPNITHPSVP 115
Query: 185 VGGEDC-------------------SIIRKTVGNPS--VFNFPVKDHFQLGKALDIFDFD 223
VG ++ S + ++ G V + + H L + L DF
Sbjct: 116 VGKDENDNVPVRFWGKAKVWKGHLESFLEQSGGKMEYEVLEWKPRLHVDLLELLGGADFA 175
Query: 224 AAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG 283
AA+VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR V E G
Sbjct: 176 RAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEE-------G 228
Query: 284 ANT------QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGA 337
A T +Y +EG D LI TAE P+ G+H + IL LPL Y S CFR EAG
Sbjct: 229 ATTFEDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGT 288
Query: 338 AGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
AG T+G++RVHQF K+E FV+ +PEES +HE+LI E+L+ +L + ++++
Sbjct: 289 AGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKLIANAEELFQALEIPYRVV 341
>gi|417402194|gb|JAA47951.1| Putative seryl-trna synthetase [Desmodus rotundus]
Length = 518
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 174/306 (56%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L+ ++ ++++ +Q+++ L E+ AVA ++ L + + Q L G+
Sbjct: 85 DLQAIISTWQELRQLQEQIQSLEVEKGAVAEAVRALLVNQDNDQAQQDPQYQSLRAHGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L+ L L ++ +A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLMLLYPKKALLEEQFYLQALRLPNQTHPDVPVGDESRARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I+RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIRRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|301622150|ref|XP_002940400.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Xenopus
(Silurana) tropicalis]
Length = 505
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 200/380 (52%), Gaps = 35/380 (9%)
Query: 41 FRLLARAFS-----APALQTIDTTDN-------KGGVAVKPQWKAAIDFKWIRDNKEAVS 88
RLLAR S A T T D + G + KPQ +D + + + EA
Sbjct: 7 LRLLARQRSWGHAGKRAFCTSGTVDRSRLYDHVRDGYSAKPQ----LDMETLTRDLEAAE 62
Query: 89 ANIRNRNS---NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLI- 144
R S + L+ V+ ++ ++ V++E+ L EE++A+A ++K + E+Q L
Sbjct: 63 REYLERKSGSRHGELKEVIAIWNRLEKVKQEIKTLEEEKSAIAKEVKHMVISEEKQNLQT 122
Query: 145 --------EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKT 196
+ GK+++ L TL ++ L A +PN THP+ PVG E + + +
Sbjct: 123 NPRYALIRKRGKDIRLELSTLYKEESNLEGSFYPRALRLPNRTHPNTPVGDESKARVLEV 182
Query: 197 VGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVI 256
VG F+F + H ++G+ LDI + VSG + YYL+ +L+ L+N+T+S+++
Sbjct: 183 VGVKPEFDFKICGHLEIGEDLDIIRQRRLSHVSGHRSYYLRGAGSLLQHALVNFTISKLV 242
Query: 257 KRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI---EGADQCLIGTAEIPVGGIHMDS 313
K+GF P++ P+++R +V E CG Q +QVYS+ + D L GT+E+ + G MD
Sbjct: 243 KKGFIPMSVPDMLRGAVFEGCGMQADAHASQVYSVDPLQHPDLNLAGTSEVGIAGFFMDH 302
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE---ESDSYHE 370
+ LP++ S C+R E G T GLYRVH F+K+EMF E ES +
Sbjct: 303 AVMLQDLPVRTVCCSTCYRAETD-TGRETWGLYRVHHFTKVEMFGVTANESGIESQEMLD 361
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
E + ++++++S LGLHFK+L
Sbjct: 362 EFLGLQKEIFSELGLHFKVL 381
>gi|344996947|ref|YP_004799290.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343965166|gb|AEM74313.1| Seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 420
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 182/321 (56%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL EK + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRANPEKVQGGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + +L+ E K L + + L+ + ++ DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTELMNELKELSDKIKELDSRVKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ V +F VK H+++G +L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T + P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|402905464|ref|XP_003915539.1| PREDICTED: serine--tRNA ligase, mitochondrial [Papio anubis]
Length = 683
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 173/301 (57%), Gaps = 15/301 (4%)
Query: 104 LELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPSER-QKLIEEGKNLKEGL 154
+ ++++ +++++ L EE+ AV AN+ G+++ R Q L G+ +++ L
Sbjct: 255 ISTWQELRQLREQIRSLEEEKEAVTEAVRALLANQDSGEVQQDPRCQGLRARGREIRKKL 314
Query: 155 VTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLG 214
L +L ++ +A +PN THPDVPVG E + + VG+ F+F + H ++G
Sbjct: 315 SPLYPREAQLEEQFYLQALKLPNQTHPDVPVGDESQAQVLHVVGDKPAFSFQPRGHLEIG 374
Query: 215 KALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVV 274
+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+++R +V
Sbjct: 375 EKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVF 434
Query: 275 EKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCF 331
E CG P + +Y+I+ A D L GTAE+ + G MD ++ LP++ S C+
Sbjct: 435 EGCGMTPNANPSHIYNIDPARFEDVNLAGTAEVGLAGYFMDHAVAFRDLPVRMVCSSTCY 494
Query: 332 RTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKL 389
R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++
Sbjct: 495 RAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRV 553
Query: 390 L 390
L
Sbjct: 554 L 554
>gi|431909691|gb|ELK12849.1| Seryl-tRNA synthetase, mitochondrial [Pteropus alecto]
Length = 518
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 173/306 (56%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AVA ++ L + + Q L G+
Sbjct: 85 DLPAIITTWQELRQLREQIRSLEEEKGAVAEAVRALLVNQDGSQVQQDPQYQTLRARGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ LV L +L ++ A +PN THPDVPVG E + + +GN F+F +
Sbjct: 145 IRKRLVLLYPREARLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVIGNKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LD+ + VSG + YYL+ +L+ GL+N+TL++++ RGFTP+T P+++
Sbjct: 205 HLEIAEKLDVIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLVHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAET-HTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|256824062|ref|YP_003148022.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
gi|256687455|gb|ACV05257.1| seryl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
Length = 426
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R N +AV A+ R R + ++ + VLE+ + + Q E + LR E+ K
Sbjct: 2 IDIRELRANPDAVRASQRTRGEDESVVDRVLEVEARSRSKQAEFESLRAEQKTF-GKTIA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ++ +L +GK + + LE + +L E + + I N+ P VP GGED +
Sbjct: 61 QAPADQKAELAAQGKEMAARVKALEAEAGELAAEADRLLRTIGNVVKPQVPAGGEDDFEV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F F +DH +LG+ L D + A+VSGS+FY+L LE+ ++N
Sbjct: 121 LEEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGSRFYFLTGIGARLELAMMNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L +K GFTP+ TP +V V+ GF A+ +VY +E DQ L+GT+E+ + G H
Sbjct: 181 ALDLALKNGFTPMITPSLVNPDVMAGAGFLDSHAD-EVYHLEADDQYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL + P +YA +S C+R EAG+ G TRG+ RVHQF+KLEMF++C EE+++ HE
Sbjct: 240 ADEILDLADGPRRYAGWSTCYRREAGSHGKDTRGIIRVHQFTKLEMFIYCTAEEAETEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ +E+++ ++ L ++++
Sbjct: 300 RLLALEKEMLGAMELPYRVI 319
>gi|260947608|ref|XP_002618101.1| hypothetical protein CLUG_01560 [Clavispora lusitaniae ATCC 42720]
gi|238847973|gb|EEQ37437.1| hypothetical protein CLUG_01560 [Clavispora lusitaniae ATCC 42720]
Length = 485
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 189/348 (54%), Gaps = 31/348 (8%)
Query: 62 KGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN--ANLELVLELYEKMLNVQKEVDR 119
K VA+K +AA+D K I ++ + +I+ R + ++L V+E +K +N+Q E +R
Sbjct: 44 KNTVALK---RAALDIKSIISRQDEMRQSIKRRGGSEESDLSYVIENRQKEINLQNERNR 100
Query: 120 LREERNAVANKMKGKLEPSERQKLIEEGKN----LKEGLVTLEEDLVKLTDELQQEAQCI 175
L ER + ++ ++ +E+ I +N K+ + ++E DL +++ + + + +
Sbjct: 101 LVNERKKLGAQLGQLMKNAEKSDDISRLQNRLLEFKKQIGSIENDLETVSENVHRSLEAL 160
Query: 176 PNMTHPDVP-----------VGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDA 224
PN P VP +GG++ S I + P+ + DH +G+ L+I +F
Sbjct: 161 PNWLDPTVPEDPLVPEIVDIIGGDNESTISSEMP-PTTY-----DHKTIGEKLNIMNFST 214
Query: 225 AAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGA 284
A+ +SGS +YYL + +LE L+ + L + RG+ + P IV+S VV CGF+PR
Sbjct: 215 ASRISGSSWYYLVGDGALLEQALVQYALQQARARGYRMVIPPSIVKSEVVHACGFKPRDQ 274
Query: 285 N--TQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTAT 342
N QVY+IE L GTAEIP+G +H S + +P +Y S +R EAGA G T
Sbjct: 275 NGEKQVYAIENEPLSLTGTAEIPMGALHSSSTIE---VPTRYVGVSRAYRAEAGARGKDT 331
Query: 343 RGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+E+F F P+ S EE+ + + S LG+ K+L
Sbjct: 332 TGLYRVHEFTKVELFHFTHPDLSAKELEEIKDFQISILSGLGIKAKVL 379
>gi|229494079|ref|ZP_04387846.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121]
gi|229319012|gb|EEN84866.1| seryl-tRNA synthetase [Rhodococcus erythropolis SK121]
Length = 417
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N E V + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPEIVRESQRTRGEDPGLVDALLEADASRRAAVLTGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + L + I N+ P GGED I+
Sbjct: 61 QASPEERPALLEGSKELAAKVKEAEAAQHEAQAALDSAHRAISNVVQEGAPAGGEDDYIV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG++L + D + A+VSGS+FY++ ML++GL+
Sbjct: 121 LEHVGEIPKFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFMTGYGAMLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I GFT + P +VR ++ GF GA++ ++Y ++ D L+GT+E+P+ G H
Sbjct: 181 KAIANGFTMMIPPVLVRPEIMAGTGFL--GAHSDEIYHLQDDDLYLVGTSEVPMAGYHSG 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L
Sbjct: 239 EILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCRPEDADAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E D+ +++ + ++++
Sbjct: 299 LGWERDMLAAIDVPYRVI 316
>gi|170085533|ref|XP_001873990.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651542|gb|EDR15782.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 490
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 179/328 (54%), Gaps = 13/328 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNS---NANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
I+++ I +N + S N NR + + + V Y + + E++ R R+ V ++
Sbjct: 37 INYRDISENVTSKSLNALNRKARIPHNAIASVARAYNECKRISNELNAKRNIRSMVGERI 96
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
+ +E++ + E LK + LE L E A IPN THP P+G E +
Sbjct: 97 RSSSNDAEKENIRAEATKLKTEVKELEAQLHLAEQECLHFALSIPNDTHPSAPLGPESAA 156
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ G+ ++ + P +DH + + + D ++ + V+GS +Y+LKNEA +LE+ L N+
Sbjct: 157 VTLAEYGH-AIPSNPQRDHVTVCQKFGLLDLESGSTVTGSSWYFLKNEAALLELALTNYA 215
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN----TQVYSIEGA-----DQCLIGTA 302
+S +K GFTP+T P++VRS + +CGFQPR + + +Y I + L GT+
Sbjct: 216 MSIALKHGFTPVTAPDVVRSDIALRCGFQPRDDSDPPVSHMYHISSTHPSSPELVLSGTS 275
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
EIP+ G+ + + S LPLK H FR EAGA TRGLYRVHQF+K+E+F
Sbjct: 276 EIPLAGMFANKVFSSLALPLKVVGVGHAFRAEAGARSADTRGLYRVHQFTKVELFTVTAE 335
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES++ EE++ I++ + LG+ F++L
Sbjct: 336 GESEAMMEEMMTIQKSILQGLGIPFRIL 363
>gi|433457255|ref|ZP_20415263.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
gi|432195153|gb|ELK51712.1| seryl-tRNA ligase [Arthrobacter crystallopoietes BAB-32]
Length = 427
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R N E A+ R R ++ +L + ++ + LR ++NA K+
Sbjct: 2 IDVNELRANPEVFRASQRARGADESLIDAIISADASRREAITRYESLRADQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + + + + + + +PN+ VP GGED +
Sbjct: 61 QAKGEEKQALLAEVKELAAAVKAAQAESEAAQAQQEGLLRTVPNLVIDGVPAGGEDDFEV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
KTVG P F+ F +DH ++G+ + D + A+VSG++FY+LK LE+ L+N
Sbjct: 121 IKTVGKPRDFSADGFAPRDHLEIGELIGGIDMERGAKVSGARFYFLKGVGARLELALLNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + + GFTP+ TP +VR ++ GF + ++Y + D L+GT+E+P+ G H
Sbjct: 181 AMDQAVAAGFTPMITPTLVRPETMQGTGFDV-AHDAEIYRLADDDLYLVGTSEVPLAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S PL+YA +S C+R EAG+ G TRG+ RVHQF+K+EMF++ +E+ HE
Sbjct: 240 ADEILDLSGGPLRYAGWSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVDEAAKEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE++ + + L ++++
Sbjct: 300 RLLAWEEEMLAKVELPYRVI 319
>gi|255326158|ref|ZP_05367245.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
gi|255296869|gb|EET76199.1| serine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
Length = 436
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N + A+ R R + +++ +LE + E + LR E+NA K
Sbjct: 2 IDINLLRENPDVFRASQRARGKDETHVDRILEADTARRALIGEYETLRAEQNAFG-KTVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VPVGGED ++
Sbjct: 61 KAPKEEKPALVAQAKELAARVNEAKTASEAKTAEYEELISSIENLIIDGVPVGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ +D D A+VSG++FY+LK + LE L+
Sbjct: 121 VKEVGTPRDFTTEGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATEHGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL KY +S C+R EAG+AG TRG+ RVHQF+K EMFV+C E+++ HE
Sbjct: 240 TDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQFNKAEMFVYCPVEQAEEMHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +EE++ GL ++++
Sbjct: 300 KLLSLEEEMLQRCGLAYRVI 319
>gi|453073309|ref|ZP_21976262.1| seryl-tRNA ligase [Rhodococcus qingshengii BKS 20-40]
gi|226182800|dbj|BAH30904.1| seryl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|452756620|gb|EME15034.1| seryl-tRNA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 417
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N E V + R R + L + +LE D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPEIVRESQRTRGEDPGLVDALLEADASRRAAVLTGDNLRAEQKAFGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E K L + E + L + I N+ P GGED I+
Sbjct: 61 QASPEERPALLEGSKELAAKVKEAEAAQHEAQAALDAAHRAISNVVQEGAPAGGEDDYIV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F KDH +LG++L + D + A+VSGS+FY++ ML++GL+
Sbjct: 121 LEHVGEIPKFDFEPKDHLELGESLGLIDMERGAKVSGSRFYFMTGYGAMLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I GFT + P +VR ++ GF GA++ ++Y ++ D L+GT+E+P+ G H
Sbjct: 181 KAIANGFTMMIPPVLVRPEIMAGTGFL--GAHSDEIYHLQDDDLYLVGTSEVPMAGYHSG 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ H+ L
Sbjct: 239 EILELNEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCRPEDADAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E D+ +++ + ++++
Sbjct: 299 LGWERDMLAAIDVPYRVI 316
>gi|422323979|ref|ZP_16405016.1| seryl-tRNA synthetase [Rothia mucilaginosa M508]
gi|353344772|gb|EHB89073.1| seryl-tRNA synthetase [Rothia mucilaginosa M508]
Length = 436
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N + A+ R R + +++ +LE + E + LR E+NA K
Sbjct: 2 IDINLLRENPDVFRASQRARGKDETHVDRILEADTARRALIGEYETLRAEQNAFG-KTVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VPVGGED ++
Sbjct: 61 KAPKEEKPALVAQAKELAARVNEAKAASEAKTAEYEELISSIENLIIDGVPVGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ +D D A+VSG++FY+LK + LE L+
Sbjct: 121 VKEVGTPRDFTTEGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATEHGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL KY +S C+R EAG+AG TRG+ RVHQF+K EMFV+C E+++ HE
Sbjct: 240 TDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQFNKAEMFVYCPVEQAEEMHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +EE++ GL ++++
Sbjct: 300 KLLSLEEEMLQRCGLAYRVI 319
>gi|312792870|ref|YP_004025793.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180010|gb|ADQ40180.1| seryl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 420
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 181/321 (56%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL EK + EV+ L+ +N + ++ +
Sbjct: 2 LDLKYIRTNPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPRL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + +L+ E K L + + L+ ++ DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTELMNELKELSDKIKELDSRFKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ V +F VK H+++G +L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGDVRVPDFEVKPHWEIGMSLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T + P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTEIFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PEES E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEESYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|335049136|ref|ZP_08542144.1| serine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333764018|gb|EGL41426.1| serine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 424
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 179/321 (55%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R+N EAV NI+NRN++ +L+ + L K + ++V+ ++ ERN V ++ +
Sbjct: 2 LDAKFVRENLEAVRENIKNRNAHVDLDAFIALDSKRRTLIQQVETMKNERNTVTQEISRL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
K + LIE K L + + ++++ ++ + L+Q IPNM HP VPVG +D
Sbjct: 62 KRNKEDASALIEAMKKLGDTIAVQDKEIHQVAEALRQIQLMIPNMCHPSVPVGKDDSQNP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+RK G P+ F+F K+H+++G+ L I D + AA+V+G++FYY LE + N+
Sbjct: 122 EVRKW-GEPTNFSFTPKEHWEIGENLGILDAERAAKVAGARFYYYIGAGARLERAVYNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQCLIGTAEIPVGGI 309
L K G+T + P IV + G P+ + +EG D LI TAE+P+
Sbjct: 181 LDRHTEKDGYTEVIPPYIVNRKAMTGTGQLPKFSEDMYQLQVEGQDMFLIPTAEVPLTNY 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ IL LP+ A + CFR EAG+AG TRGL R HQF K+EM + PE S
Sbjct: 241 YSGEILRADQLPVYVTALTPCFRAEAGSAGRDTRGLIRQHQFQKVEMVKYTTPESSYDEL 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L R ED+ +L L + ++
Sbjct: 301 DKLTRNAEDILKALELPYHVV 321
>gi|72179619|ref|XP_788714.1| PREDICTED: serine--tRNA ligase, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 508
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 187/355 (52%), Gaps = 28/355 (7%)
Query: 47 AFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLEL 106
++ + L TI D K + +K ID ++ N E ++ I +R + V E+
Sbjct: 55 SYPSRTLATIPKGDQKKDLMFSSDFKPDIDLDFLAQNAEVIADRISHRKGKID---VHEV 111
Query: 107 YEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEE---DLVK 163
+KM KE ++E+ + V ++ Q I++G N KE L+E L +
Sbjct: 112 LKKM----KEFQLIQEDVHDVQLRL---------QTDIDKGLNTKELESMLKEKKNQLDR 158
Query: 164 LTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFD 223
++ + A IPN HPDVP+ + ++ + + F+FP+K H +LG+ LDI
Sbjct: 159 AQNDFYRIAVAIPNSIHPDVPLTEDADPVLIEEINEKRSFDFPIKGHVELGEDLDIIRLK 218
Query: 224 AAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIK-RGFTPLTTPEIVRSSVVEKCGFQPR 282
+G + Y+LK MLE L+ +TL +IK GF + P++++ V E CG +
Sbjct: 219 NLGHTTGHRSYFLKGAGSMLEDALVRFTLDRLIKNHGFKIIKVPDLIKPVVFEACGMRTE 278
Query: 283 GANTQVYSI----EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAA 338
G +TQVY + +D L GTAE+ + G M+ + + LPL+ AA S C+R E +
Sbjct: 279 GLHTQVYPLSPEHHNSDLWLAGTAEVGIAGYLMNKTIPMAELPLRIAAVSRCYRAETAHS 338
Query: 339 GTATRGLYRVHQFSKLEMFVFCQPE---ESDSYHEELIRIEEDLYSSLGLHFKLL 390
A RGLYRVHQF+K+EMF E ES+ H+EL+ IE +L+S LGLHF++L
Sbjct: 339 ADA-RGLYRVHQFTKVEMFCVAANESGKESEQIHQELVGIERELFSDLGLHFQIL 392
>gi|15806294|ref|NP_295000.1| seryl-tRNA synthetase [Deinococcus radiodurans R1]
gi|30173221|sp|Q9RUV5.1|SYS_DEIRA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|6459024|gb|AAF10848.1|AE001975_2 seryl-tRNA synthetase [Deinococcus radiodurans R1]
Length = 425
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 183/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N +AV IR +N +L+ +L+ ++ +++ V+ ++ ERNA A K+ K
Sbjct: 2 LDLKFIRENPDAVREAIRVKNVALDLDDLLQRDRDLVALKQRVEAMQTERNANA-KLVPK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P +R LI++GK+L E L LE L + D L+Q +PN+ P VPVG ED ++
Sbjct: 61 ASPEDRPGLIQKGKDLSEDLKALEPQLREQEDALKQLLLRVPNIPLPGVPVGKDEDDNVE 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F D ++ + DF+ A VSGS+ Y LK +A +LEM ++ + L
Sbjct: 121 LRREGELPGFDFTPLDQVEILEKQGWADFERVARVSGSRSYLLKGDAALLEMAVLMFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +RGFTPL+T +VR + G P G VY +EG + L GTAE+P+ ++
Sbjct: 181 FLSQRGFTPLSTTALVRRETLVNSGHFP-GDEESVYKLEGDELLLAGTAEVPINSLYAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEE 371
LS LPL +A FS FR EAG+AG RGL RVH+F K+E +V C+ EE + E
Sbjct: 240 QLSADELPLTFAGFSAAFRREAGSAGRDVRGLIRVHEFRKVEQYVLCRADQEEGLKWFER 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E L +L L ++++
Sbjct: 300 LLSNAEGLLQALELPYRVI 318
>gi|8039794|sp|O58441.2|SYS_PYRHO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|149241121|pdb|2DQ0|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|149241122|pdb|2DQ0|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With A Seryl-Adenylate Analog
gi|198443182|pdb|2ZR2|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443183|pdb|2ZR2|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii Complexed With Atp
gi|198443184|pdb|2ZR3|A Chain A, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
gi|198443185|pdb|2ZR3|B Chain B, Crystal Structure Of Seryl-Trna Synthetase From Pyrococcus
Horikoshii
Length = 455
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 30/343 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N E V ++ R ++ V L+L + KE++RLR ERN +A
Sbjct: 2 LDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-G 187
K + K EP + +L+ + + + + + LE ++ +L ++ +PN+THP VPVG
Sbjct: 62 GKRRKKGEPVD--ELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGKD 119
Query: 188 EDCSIIRKTVGNPSVFN--------------------FPVKDHFQLGKALDIFDFDAAAE 227
E+ ++ + G V+ + K H L + L DF AA+
Sbjct: 120 ENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFARAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+
Sbjct: 180 VSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTSFEDFEDV 238
Query: 288 VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+Y +E D LI TAE P+ G+H + IL LPL Y S CFR EAG AG T+G++R
Sbjct: 239 IYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFR 298
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF K+E FV+ +PEES +HE++IR E+L+ L + ++++
Sbjct: 299 VHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVV 341
>gi|443626125|ref|ZP_21110554.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
gi|443340340|gb|ELS54553.1| putative Serine--tRNA ligase [Streptomyces viridochromogenes Tue57]
Length = 412
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 170/308 (55%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ + K+ K E+ +L++
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQL-GKLIPKASGDEKAELLK 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF-- 203
+ L + + + E Q+ + N+ HPDVPVGGE+ + +T G F
Sbjct: 60 KASQLAADVKAADAERDAADAETQELLLQLGNLVHPDVPVGGEEDFVTLETHGEIRDFAA 119
Query: 204 -NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG L D + A+VSGS+FY+L +LE+ L+N +++ GFTP
Sbjct: 120 EGFQPKDHLELGTLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAMAQATAAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +VR + GF + A VY ++ D L+GT+E+P+ HMD IL LPL
Sbjct: 180 MLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYHMDEILDAEKLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+ L+ E+ +S
Sbjct: 239 RYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQRLLEWEKQWLTS 298
Query: 383 LGLHFKLL 390
L L F+++
Sbjct: 299 LELPFRVI 306
>gi|116668708|ref|YP_829641.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
gi|166200597|sp|A0JR71.1|SYS_ARTS2 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116608817|gb|ABK01541.1| seryl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 426
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 180/322 (55%), Gaps = 12/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+NA K+
Sbjct: 2 IDVKDLSENPDKFRASQRARGADESVVDAIISADAARRAALIRFENLRAEQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGL--VTLEEDLVKLTDELQQEA--QCIPNMTHPDVPVGGED 189
+ + E+Q L+ E K L + + E D+ + QQE + IPN+ VP GGED
Sbjct: 61 QAKGEEKQALLAEVKVLAASVKAASAEADVA----QAQQEELLRAIPNLIVDGVPEGGED 116
Query: 190 CSIIRKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
I+ KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+
Sbjct: 117 DYIVVKTVGEPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALL 176
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + I GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G
Sbjct: 177 QMAMEQAIDAGFIPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVALAG 235
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ +
Sbjct: 236 YHADEILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAE 295
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HE L+ EE++ + L ++++
Sbjct: 296 HERLLAWEEEMLAKCELPYRVI 317
>gi|14521535|ref|NP_127011.1| seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878800|sp|Q9UZ21.1|SYS_PYRAB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|5458754|emb|CAB50241.1| serS seryl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742144|tpe|CCE70778.1| TPA: seryl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 455
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 192/343 (55%), Gaps = 30/343 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N E V +++ R ++ + L+L + KE+++LR ERN +A
Sbjct: 2 LDIKLIRENPELVKNDLKKRGELEKIKWIDEILKLDAEWRAKLKEINKLRHERNKIAIEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-G 187
K + K EP E +L+ + K + + + +LE+++ +L ++ +PN+THP VP+G
Sbjct: 62 GKRRKKGEPVE--ELLAKSKEIVKRIESLEKEVEELKKKIDYYLWRLPNITHPSVPIGES 119
Query: 188 EDCSIIRKTVGNPSVFN--------------------FPVKDHFQLGKALDIFDFDAAAE 227
E+ ++ + G V+ + K H L + L DF AA+
Sbjct: 120 EEDNVPIRFWGKARVWEGHLERFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFARAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+FYYL NE V+L++ LI + L E+IK+GFTP+ P +VR VE+
Sbjct: 180 VSGSRFYYLLNEIVILDLALIRFALDELIKKGFTPVIPPYMVRR-FVEEGSTTFEDFEDV 238
Query: 288 VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+Y +EG D LI TAE P+ G+H + IL LPL Y S CFR EAG AG T+G++R
Sbjct: 239 IYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIFR 298
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF K+E FV+ +PEES +HE +IR E+L+ L + ++++
Sbjct: 299 VHQFHKVEQFVYSRPEESWEWHERIIRNAEELFQKLEIPYRVV 341
>gi|342214770|ref|ZP_08707444.1| serine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341590742|gb|EGS33976.1| serine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 425
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 180/320 (56%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N E V N+ R++ +L ++ Y++ + +EV++L+ RNAV +++
Sbjct: 2 LDLKFVRENIETVQENLDRRHTTGDLASFVKFYDERRAIIQEVEQLKAVRNAVTAEISQL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDC 190
K E ++ + I E + + + + L+ L + ELQQ A +PNM VPVG E+
Sbjct: 62 KRNKENADDK--IAEMQRVGDEIGALDTKLRDVETELQQVALMLPNMCDASVPVGADENE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+I ++ G P F+F VK H+ LG++L I DF+ AA+ SG++F K LE LIN+
Sbjct: 120 NIEQRRWGTPRSFDFDVKAHWDLGESLGILDFERAAKESGARFTIYKGIGARLERALINF 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L GFT + TP IV + G P+ A +Y +EG + LI TAE+ + H
Sbjct: 180 MLDMHGSAGFTEMMTPYIVTRETLTNTGQLPKFAE-DMYKVEGENYFLIPTAEVTLTNYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ ILS LP Y AF+ CFR EAG+AG TRGL R HQF+K+E+ F +PEES + E
Sbjct: 239 ANEILSADELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAKPEESFAELE 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L E + L L +++
Sbjct: 299 TLTAQAESILQVLELPHRVI 318
>gi|290967982|ref|ZP_06559531.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781888|gb|EFD94467.1| serine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 424
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 179/321 (55%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R+N EAV NI+NRN++ +L+ + L K + ++V+ ++ ERN V ++ +
Sbjct: 2 LDAKFVRENLEAVRENIKNRNAHVDLDAFIALDSKRRTLIQQVETMKNERNTVTQEISRL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
K + LIE K L + + ++++ ++ + L+Q IPNM HP VPVG +D
Sbjct: 62 KRNKEDASALIEAMKKLGDTIAVQDKEIHQVAEALRQIQLMIPNMCHPSVPVGKDDSQNP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+RK G P+ F+F K+H+++G+ L I D + AA+V+G++FYY LE + N+
Sbjct: 122 EVRKW-GEPTNFSFTPKEHWEIGENLGILDAERAAKVAGARFYYYIGAGARLERAVYNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQCLIGTAEIPVGGI 309
L K G+T + P IV + G P+ + +EG D LI TAE+P+
Sbjct: 181 LDRHTEKDGYTEVIPPYIVNRKAMTGTGQLPKFSEDMYQLQVEGQDMFLIPTAEVPLTNY 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ IL LP+ A + CFR EAG+AG TRGL R HQF K+EM + PE S
Sbjct: 241 YSGEILRADQLPVYVTALTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYTTPESSYDEL 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L R ED+ +L L + ++
Sbjct: 301 DKLTRNAEDILKALELPYHVV 321
>gi|334328566|ref|XP_003341094.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase,
mitochondrial-like [Monodelphis domestica]
Length = 516
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 191/345 (55%), Gaps = 24/345 (6%)
Query: 64 GVAVKPQWKAAIDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRL 120
G + +PQ +D + + + E + + +R + A+L ++ ++ + +++E+ L
Sbjct: 57 GYSARPQ----LDMERLCAHPEKTARALEHRXGELTPADLPEIISTWQSLGKLREEIRAL 112
Query: 121 REERNAVANKMKGKLEPSERQKLIEE----------GKNLKEGLVTLEEDLVKLTDELQQ 170
EE+ +VA ++K L S+ + L+E+ GK+++ L L + +L +
Sbjct: 113 EEEKASVAQRIKA-LVVSQDKDLLEQDPTYRATRAQGKSIRTRLTALYANEARLEELFYT 171
Query: 171 EAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSG 230
A +PN THPDVP G E + + + VG F+F + H ++G+ LD+ + VSG
Sbjct: 172 RALRLPNQTHPDVPNGDESQARVLEVVGEKPTFSFHPRGHLEIGEKLDVIRQKRLSHVSG 231
Query: 231 SKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYS 290
+ YYL+ +L+ GL+++TL ++++RGFT +T P+++R +V E CG P + +Q+Y+
Sbjct: 232 QRSYYLRGPGALLQHGLVSFTLGKLVQRGFTAMTVPDMLRGAVFEGCGMSPNASPSQIYN 291
Query: 291 IEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
I+ + D L GTAE+ + G MD +S LPL+ S C+R E G GL+R
Sbjct: 292 IDPSRFEDLSLAGTAEVGIAGYFMDHAVSWKDLPLRVVCSSTCYRAET-HTGKEPWGLFR 350
Query: 348 VHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
VH FSK+EMF E S EE + +++++ + LGLHF++L
Sbjct: 351 VHHFSKVEMFGLTHSGTEHSSGLLEEFVSLQKEILTELGLHFRVL 395
>gi|255525903|ref|ZP_05392830.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255510397|gb|EET86710.1| seryl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 425
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R+N E V NI+N+ + L LV +EL ++ N++KE D LR +RN ++ ++
Sbjct: 2 LDLRFVRENPEVVKQNIKNKFQDNKLGLVDEVIELDTELRNIKKEADSLRADRNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + ++ + E K + E L LE +L +++ + IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKDEAEEMKKKVTEHSEHLAQLEAKEDELEKKIKTDMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P+V +F V H + + L+ D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVERFGEPAVPDFEVPYHTDIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMIDRGFTYCIPPFMIRSEVVTGVMSFAEMDA--MMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+P++S
Sbjct: 240 IGKFIDTILPEDTLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPKDSP 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 300 MWYDKLWKNTVDLFRSLDIPVRTL 323
>gi|444525181|gb|ELV13972.1| Seryl-tRNA synthetase, mitochondrial [Tupaia chinensis]
Length = 487
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 157/271 (57%), Gaps = 13/271 (4%)
Query: 132 KGKLEPS-------ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
KG+L PS + Q L G+ +++ L L V+L + +A +PN THPDVP
Sbjct: 78 KGELRPSDLPTIDPQYQGLRARGREIRKQLTLLYPTEVQLEERFYLQALRLPNRTHPDVP 137
Query: 185 VGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
VG E + + VG+ F+F + H +G+ LDI + VSG + YYL+ +L+
Sbjct: 138 VGDESQARVLHVVGDKPAFSFQPRGHLDIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQ 197
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGT 301
GL+N+TL+++++RGFTP+T P+++R +V E CG P +Q+Y+I+ + D L GT
Sbjct: 198 HGLVNFTLNKLVRRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFKDLNLAGT 257
Query: 302 AEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
AE+ + G MD ++ LP++ S C+R E G RGLYRVH F+K+EMF
Sbjct: 258 AEVGLAGYFMDHTVAFKDLPVRMVCASTCYRAETD-TGKEPRGLYRVHHFTKVEMFGVTG 316
Query: 362 P--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
P E+S EE + ++ ++ + LGLHF++L
Sbjct: 317 PGLEQSSQLLEEFLSLQMEILTELGLHFRVL 347
>gi|406972455|gb|EKD96216.1| hypothetical protein ACD_24C00137G0003 [uncultured bacterium]
Length = 426
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 180/322 (55%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRN--SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
+D K+IR NKE + I ++ + NL+ +LEL K L V K+ + R +N ++ K+
Sbjct: 2 LDLKYIRGNKEIIKKAIYDKQLQNTLNLDELLELDAKYLQVLKKTELHRNLKNELSKKIS 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
G E E+QKLIE+ +K L +E +L K D L +PN +VP G GE+ +
Sbjct: 62 GIKEKDEKQKLIEKATKVKSELSDMETELKKFKDLLDILLLKVPNPPAKEVPYGEGENDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ + VG P VF F +KDH +LG+AL I D D +++G + Y+LKNE LEM ++ +
Sbjct: 122 VVLRKVGTPKVFAFKIKDHVELGEALGILDVDRGVKIAGFRGYFLKNEGAELEMAVLKYA 181
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L + +GF T P +V+ G+ P G + +G LIGTAE+ + +
Sbjct: 182 LDYMKTQGFDFYTVPWLVKPDYFVGTGYFPWGEEDHYITQDGL--ALIGTAEVSLTSYYA 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE--SDSYH 369
+L E LP+K S CFR E G+ G T+G++R+HQF+KLE V E S +H
Sbjct: 240 GEVLREKDLPIKMMGLSPCFRREVGSYGKDTKGIFRIHQFTKLEQVVLLPEGEEFSREWH 299
Query: 370 EELIRIEEDLYSSLGLHFKLLL 391
E+++ E++ +LGL ++++L
Sbjct: 300 EKMLSYAEEILQNLGLSYQIVL 321
>gi|403305223|ref|XP_003943167.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 2 [Saimiri
boliviensis boliviensis]
Length = 690
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 174/301 (57%), Gaps = 15/301 (4%)
Query: 104 LELYEKMLNVQKEVDRLREERNAV--------ANKMKGKLEPS-ERQKLIEEGKNLKEGL 154
+ ++++ +++++ L EE+ AV AN+ G+++ + Q L G+ +++ L
Sbjct: 262 ISTWQELRQLREQIRSLEEEKAAVTKAVQALLANRDHGEVQQDPQYQSLRARGREIRKEL 321
Query: 155 VTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLG 214
V L +L +E +A +PN THPDVPVG E + + VG+ F+F + H ++G
Sbjct: 322 VPLYPREAQLEEEFYLQALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRGHLEIG 381
Query: 215 KALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVV 274
+ LDI + VSG + YYL+ +L+ GL+N+T ++++ RGFTP+T P+++R +V
Sbjct: 382 EKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLHRGFTPMTVPDLLRGAVF 441
Query: 275 EKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCF 331
E CG P +Q+Y+I+ + D L GT+E+ + G MD ++ LP++ S C+
Sbjct: 442 EGCGMTPNANPSQIYNIDPSRFEDLNLAGTSEVGLAGYFMDHSVAFRDLPVRMVCSSTCY 501
Query: 332 RTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKL 389
R E G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++
Sbjct: 502 RAETN-TGKDPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLALQMEILTELGLHFRV 560
Query: 390 L 390
L
Sbjct: 561 L 561
>gi|14590588|ref|NP_142656.1| seryl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|3257118|dbj|BAA29801.1| 460aa long hypothetical seryl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 460
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 30/343 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N E V ++ R ++ V L+L + KE++RLR ERN +A
Sbjct: 7 LDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEI 66
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-G 187
K + K EP + +L+ + + + + + LE ++ +L ++ +PN+THP VPVG
Sbjct: 67 GKRRKKGEPVD--ELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVGKD 124
Query: 188 EDCSIIRKTVGNPSVFN--------------------FPVKDHFQLGKALDIFDFDAAAE 227
E+ ++ + G V+ + K H L + L DF AA+
Sbjct: 125 ENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFARAAK 184
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+
Sbjct: 185 VSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTSFEDFEDV 243
Query: 288 VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+Y +E D LI TAE P+ G+H + IL LPL Y S CFR EAG AG T+G++R
Sbjct: 244 IYKVEDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFR 303
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF K+E FV+ +PEES +HE++IR E+L+ L + ++++
Sbjct: 304 VHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVV 346
>gi|320532740|ref|ZP_08033527.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135047|gb|EFW27208.1| seryl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 426
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ +L + V+ E + LR E+ V+ + G
Sbjct: 2 IDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQSLAAFENLRAEQKQVSRSV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L E + E EL A+ N+ P GGE D +
Sbjct: 61 KASPEERPAILASAKELAEQVKAAEAASSAAAAELDDLARQFANLIE-GAPSGGEEDYVV 119
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH +G+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 120 LRHEGGEPRDFTAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 179
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 180 AALDAAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PEE+++
Sbjct: 238 YHADEILDLSAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEEAEAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H L+ +EE++ + + L ++++
Sbjct: 298 HARLLAMEEEMLALVELPYRVI 319
>gi|297572279|ref|YP_003698053.1| seryl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296932626|gb|ADH93434.1| seryl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 425
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 175/321 (54%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N EAV A+ + R + A ++ +L EK Q+ + LR ++ ++ + G
Sbjct: 2 IDIRTLRENPEAVRASQQARGDDPALVDTILAADEKRRASQQAFEDLRAQQKNLSRTV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER ++ + K++ + + LE + K +E Q + N P VP GGED +
Sbjct: 61 KASPEERPAILAQAKDMSDQVKALEAESNKAAEEFQAAMMKLANPVLPTVPAGGEDDYEV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG F F KDH + +A+ D + +VSGS+FYYLK LE+ L+
Sbjct: 121 LREVGTIRDFAAEGFEPKDHLDVAEAIGAVDMERGTKVSGSRFYYLKGIGARLELALLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGI 309
+ GFT + TP +VR V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 181 AADQAEANGFTLMNTPTLVRPEVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAGY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S P +YA +S C+R EAG+ G TRG+ RVHQF+K+EMF FC E++ H
Sbjct: 239 HSDEILDLSDGPKRYAGWSTCYRREAGSYGRDTRGIIRVHQFNKVEMFSFCTAEDAADEH 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ + EE++ + L ++++
Sbjct: 299 QRFLAWEEEMLQKVELPYRVI 319
>gi|283457193|ref|YP_003361762.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18]
gi|283133177|dbj|BAI63942.1| seryl-tRNA synthetase [Rothia mucilaginosa DY-18]
Length = 435
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N + A+ R R + +++ +LE + E + LR E+NA K+
Sbjct: 2 IDINLLRENPDVFRASQRARGKDETHVDRILEADTARRALIGEYENLRAEQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ + K L + + T E ++ I N+ VP GGED ++
Sbjct: 61 KAPKEEKPALVAQAKELAARVNEAKAASEAKTAEYEELISSIENLIIDGVPTGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH ++G+ +D D A+VSG++FY+LK + LE L+
Sbjct: 121 VKKVGTPRDFTADGFEPRDHLEIGELVDGIDMARGAKVSGARFYFLKGQVARLEQALMWM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + GFT +TTP +VR ++ GF + + ++Y +E D L+GT+E+ + G H
Sbjct: 181 ALDLATEHGFTMMTTPTLVRPEIMNGTGFNVK-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL KY +S C+R EAG+AG TRG+ RVHQF+K EMFV+C E+++ H+
Sbjct: 240 TDEILDFEKGAKKYLGWSSCYRREAGSAGKDTRGIIRVHQFNKAEMFVYCPVEQAEEMHD 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +EE++ GL ++++
Sbjct: 300 KLLSLEEEMLQRCGLAYRVI 319
>gi|452910092|ref|ZP_21958774.1| Seryl-tRNA synthetase [Kocuria palustris PEL]
gi|452834710|gb|EME37509.1| Seryl-tRNA synthetase [Kocuria palustris PEL]
Length = 433
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 22/328 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N E A+ R ++ ++ + VLE + E + LR E+ + K+
Sbjct: 2 IDINMLRENPEKFRASQAARGADESVVDRVLEADSARRSAITEYETLRAEQKSFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC--------IPNMTHPDVPV 185
+ + ++Q+++ E K+L D VK D AQ +PN+ +P
Sbjct: 61 QAQGEQKQQMLAEVKDLA--------DRVKDADSRADAAQATIDDLLKALPNLIIDGIPA 112
Query: 186 GGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
GGED + K VG P F F +DH ++G+ +D D A+V GS+FY+LK +
Sbjct: 113 GGEDDFTVLKHVGQPRDFAAEGFEARDHLEIGELVDGLDMARGAKVGGSRFYFLKRDIAR 172
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
LE L+ + F LTTP +VR ++ GF + ++Y +E D L+GT+
Sbjct: 173 LETALLRMGQDLAMDNDFIALTTPTLVRPEIMAGTGFDVE-HDDEIYRLEKDDLYLVGTS 231
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E+ + G H D I+ S PL+YA +S C+R EAG+AG TRG+ RVHQF+KLEMFV+C
Sbjct: 232 EVAIAGYHADEIIDLSDGPLRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFVYCTQ 291
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+++++ H L+ EE + + GL ++++
Sbjct: 292 DQAEAEHARLLEWEEQMLQACGLSYRVI 319
>gi|260763744|dbj|BAI44435.1| seryl-tRNA synthetase 2 [Danio rerio]
Length = 510
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 182/337 (54%), Gaps = 19/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D K + + EA++A + +R + A++ L++ +++ + VQ+E+ L + V+
Sbjct: 55 KPELDMKRVCEEAEALTAELEDRRGDLRPADVPLIISVWKNLQKVQEEISHLEGRKQVVS 114
Query: 129 NKMK---GKLEPSERQKLIEEGKNLKEGLVTLEE--DLVKLTDELQQEAQC----IPNMT 179
+ ++ GK + S L E G +EG E+ L EL++E C +PN T
Sbjct: 115 STVRELVGKHDKSTLSSLEEYGHAREEGRAIREKLNQLYLQEKELEKEHYCRALRLPNRT 174
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
HP VP+G E + + + VG F+F K H Q+G++LDI + VSG + YYL+
Sbjct: 175 HPSVPIGDESQARVVEVVGEKREFDFKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGA 234
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI---EGADQ 296
L+ L N+ + + KRGF P+ P+I++S V E CG QP +QVYS+ D
Sbjct: 235 GAQLQFALQNFAMDLLQKRGFIPMVVPDILKSVVFEGCGMQPHAQKSQVYSLNPKRSPDL 294
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L GT E+ V G MD ++ LP++ S C+R E G T GLYRVH F+K+EM
Sbjct: 295 NLAGTGEVGVAGYFMDHAVNFKDLPVRTVCSSTCYRAETD-TGRETWGLYRVHHFTKIEM 353
Query: 357 FVFC---QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F EES ++ + ++++++SSL LH+++L
Sbjct: 354 FGVSANETGEESSQLLDQFVTLQKEIFSSLQLHYRVL 390
>gi|383806792|ref|ZP_09962353.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
gi|383299222|gb|EIC91836.1| seryl-tRNA synthetase [Candidatus Aquiluna sp. IMCC13023]
Length = 421
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 178/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N +A+ + R ++ A ++L +L E+ ++ + +R ++NA K+
Sbjct: 2 IDINLLRENPQAIRDSQAARGADEALVDLAAKLAEQKKVALQQFEAMRAKQNA-HGKLVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+ +L+ + + + + LE + EL I N+ VP G E+ ++
Sbjct: 61 QAPKEEKAELVAQAQEMSSDVKKLEAEANFADQELMVVLHKIENVVLEGVPAGSEENFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG F+F KDH LG++LD+ D + A+VSGS+FY+LK LE+ L+ L
Sbjct: 121 IKEVGKKPEFSFEAKDHVSLGESLDVIDIERGAKVSGSRFYFLKGLGARLELALMQLALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT L TP +V+ +++ GF + +VY + D L GT+E+ + G H
Sbjct: 181 QASEAGFTALITPTLVKPEIMQGTGFLGE-HSAEVYYLPADDLYLTGTSEVALAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + P++YA +S C+R EAG+ G TRG+ RVHQF+KLEMF +C+PE++++ H +L+
Sbjct: 240 ILDDLTTPMRYAGWSTCYRREAGSHGKDTRGILRVHQFNKLEMFSYCKPEDAEAEHAKLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
+E + L ++++
Sbjct: 300 EWQEQMLQKCELPYRVI 316
>gi|343523234|ref|ZP_08760196.1| serine--tRNA ligase [Actinomyces sp. oral taxon 175 str. F0384]
gi|343400390|gb|EGV12908.1| serine--tRNA ligase [Actinomyces sp. oral taxon 175 str. F0384]
Length = 437
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 174/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ +L + V+ E + LR E+ V+ + G
Sbjct: 13 IDLRALRENPEPFRASQRARGADVDLVDRVIAADETRRQALAAFENLRAEQKQVSRSV-G 71
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K P ER ++ K L E + E L A+ N+ P GGE D +
Sbjct: 72 KASPEERPAILANAKELAEQVKAAEASSSAAAAALDDLARQFANLIE-GAPSGGEEDYVV 130
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R G P F F DH +G+ LDI D A+VSG++FYYLK + LE+ L+
Sbjct: 131 LRHEGGRPRDFAAEGFEPADHLAIGEGLDIIDTRRGAKVSGARFYYLKGWGMRLELALMT 190
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGG 308
L + GFTP+TTP +V V+ GF GA++ ++Y + D L GT+E+ + G
Sbjct: 191 AALDAAVAHGFTPMTTPTLVTPQVMGGTGFL--GAHSDEIYYLPADDLYLTGTSEVALAG 248
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL S P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE++++
Sbjct: 249 YHADEILDLSAGPKRYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAE 308
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H L+ +EE++ + + L ++++
Sbjct: 309 HARLLAMEEEMLALVELPYRVI 330
>gi|386841200|ref|YP_006246258.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101501|gb|AEY90385.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794494|gb|AGF64543.1| seryl-tRNA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 412
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 170/308 (55%), Gaps = 6/308 (1%)
Query: 87 VSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIE 145
+ A+ R R + L + +L E+ + D LR E+ + K+ K E+ +L+
Sbjct: 1 MRASQRARGEDVALVDALLSADERRRSSGVRFDELRAEQKQL-GKLIPKAGAEEKAELLG 59
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN- 204
+ LK + E + E Q+ + N+ HPDVPVGGE+ +T G F
Sbjct: 60 RAEQLKADVKAAEAERDAADAETQELLLKLGNLVHPDVPVGGEEDFATLETHGTIRDFGA 119
Query: 205 --FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
F KDH +LG+ L D + A+VSGS+FY+L +LE+ L+N +++ GFTP
Sbjct: 120 EGFEPKDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNAAIAQATAAGFTP 179
Query: 263 LTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPL 322
+ TP +VR + GF + A VY ++ D L+GT+E+P+ HMD I+ LPL
Sbjct: 180 MLTPALVRPQSMAGTGFLGQAAQ-DVYHLDKDDLYLVGTSEVPLAAYHMDEIIDADRLPL 238
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSS 382
+YA FS CFR EAG+ G TRG++RVHQF K+EMF + PE+S + H+ L+ E+ +S
Sbjct: 239 RYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVAPEDSQAEHQRLLEWEKQWLTS 298
Query: 383 LGLHFKLL 390
L L F+++
Sbjct: 299 LELPFRVI 306
>gi|73748415|ref|YP_307654.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|147669195|ref|YP_001214013.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|289432463|ref|YP_003462336.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452203420|ref|YP_007483553.1| serine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452204856|ref|YP_007484985.1| serine--tRNA ligase [Dehalococcoides mccartyi BTF08]
gi|123619533|sp|Q3ZWY0.1|SYS_DEHSC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189083567|sp|A5FRN4.1|SYS_DEHSB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|73660131|emb|CAI82738.1| seryl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|146270143|gb|ABQ17135.1| seryl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|288946183|gb|ADC73880.1| seryl-tRNA synthetase [Dehalococcoides sp. GT]
gi|452110479|gb|AGG06211.1| serine--tRNA ligase [Dehalococcoides mccartyi DCMB5]
gi|452111912|gb|AGG07643.1| serine--tRNA ligase [Dehalococcoides mccartyi BTF08]
Length = 413
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 180/317 (56%), Gaps = 11/317 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V + +RN++A ++ +LEL N+ +E+D LR +R +A +
Sbjct: 2 LDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQRD-- 59
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
+ IEEG+ L+ + TLE +L ++ ++L +PN+ P VPVG ++ +++
Sbjct: 60 ------ETAIEEGRVLRGQISTLESELSQVDEKLTDRLLRVPNIPDPSVPVGKDESENVV 113
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
G F+F K H++LG+ALDI DFD ++SGS+FY LK L+ LI + L
Sbjct: 114 LYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAGARLQRALIAFMLD 173
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K +T + P +++ + G P+ A+ + E D + TAE P+ +H D
Sbjct: 174 LHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAE-EDYWWVPTAEAPLTNLHRD 232
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILS LP+ Y A++ CFR E +AG RG+ R+HQF K+E++ +C+PE+S + E++
Sbjct: 233 EILSAEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKM 292
Query: 373 IRIEEDLYSSLGLHFKL 389
+ E++ +L + ++L
Sbjct: 293 VADAEEIADALKIPYRL 309
>gi|337294111|emb|CCB92096.1| Seryl-tRNA synthetase [Waddlia chondrophila 2032/99]
Length = 423
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 189/326 (57%), Gaps = 9/326 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
ID K IR N+E + ++ + +L +LEL +K+ ++ +V++L+ ERN V+ K M
Sbjct: 2 IDIKLIRANREEIEEKLKRKEPGISLFPILELDQKIRGLKTKVEQLKSERNHVSKKIGEM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC- 190
K K E S GK+ + + ++ +L L ++ + E +PN+ D+ + +
Sbjct: 62 KRKGEDSSAMMSEVSGKSAE--IHAIDHELGPLEEKFRLELAKLPNLPMDDIKIHDDPAE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+++ K G F+FP K+H +L + L +FDF A+++GS + + LE L+++
Sbjct: 120 NVMIKEFGEKREFDFPFKNHVELNEQLKLFDFVRGAKIAGSGWPIYRGWGARLEWALLHY 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIPVGG 308
+S IK GFT P +VR V+ G P+ AN Q ++I E + LI TAE+P+ G
Sbjct: 180 MMSVNIKNGFTQWMPPALVRPEVMFGSGQLPKFANQQ-FAIHDEEYNLFLIPTAEVPLNG 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D IL E LPLKY A++ CFR EAGAAG+ RGL R HQF+K+EMF FC+PEES
Sbjct: 239 LHADEILEEEELPLKYCAYTPCFRREAGAAGSNERGLIRTHQFNKVEMFCFCKPEESGKI 298
Query: 369 HEELIRIEEDLYSSLGLHFKLLLFLA 394
+E+I E++ LGLH++ +L +
Sbjct: 299 FDEMIANAEEILEGLGLHYRNMLLVT 324
>gi|309792285|ref|ZP_07686757.1| seryl-tRNA synthetase [Oscillochloris trichoides DG-6]
gi|308225826|gb|EFO79582.1| seryl-tRNA synthetase [Oscillochloris trichoides DG6]
Length = 422
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 182/320 (56%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K IR+ + V A +R R + A ++ +L + E+ ++ KEV+ L+ ERNAV+ ++
Sbjct: 2 LDIKLIREQPDLVRAGLRRRGDDPAQVDAILAVDERRRSLIKEVEVLKAERNAVSKEISK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
+ +ER+ I + + + + L++ E Q+ +PN+ H DVP G E ++
Sbjct: 62 LRDATEREAKISAMRAVGDRIAELDQQANAAEAEFQRLLLWLPNLPHADVPDGSTEHDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + G P F+F K H++LG+AL I DF+ ++SGS+F+ LK L+ LI W L
Sbjct: 122 VVRVEGQPRQFDFTPKPHWELGEALGIIDFERGVKLSGSRFFVLKGAGSRLQRALITWML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ G++ +T P +V+ V+ G PR G N ++ IEGAD LI TAE+PV ++
Sbjct: 182 DLHTQQHGYSEITPPYVVKEDVLVGTGNLPRFGEN--LFRIEGADLTLIPTAEVPVTNLY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S LP+ + A++ C+R E +AG RG+ RV+QF K+EM F PE S +
Sbjct: 240 RDEILEASDLPIFHVAYTPCWRNEQMSAGRDVRGIKRVYQFDKVEMVKFVTPETSYAELL 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ ED+ +L + ++LL
Sbjct: 300 TLVDNAEDVCKALKIPYRLL 319
>gi|237784844|ref|YP_002905549.1| seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
gi|259511663|sp|C4LGQ1.1|SYS_CORK4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|237757756|gb|ACR17006.1| Seryl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
Length = 423
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 181/328 (55%), Gaps = 22/328 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V + R R + L + +L+ + D R E A M
Sbjct: 2 IDLKQLRDDPDRVRESQRTRGEDPGLVDQLLQADQARREAISAADATRAEHKAYTKSMGK 61
Query: 134 KLE---PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC--------IPNMTHPD 182
K+ P E++ L +G L ++VK +E Q+ A+ I N+
Sbjct: 62 KMRDASPEEKENLRAKGTELS--------NVVKEKEEAQRVAEASVHDLQMQISNIVE-G 112
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P GGE+ ++ + VG P F+F KDH +LG++L I D + A+VSGS+FY+LK +
Sbjct: 113 APAGGEEDFVVVEKVGTPPQFDFEPKDHLELGESLGIIDMERGAKVSGSRFYFLKGAGAL 172
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L++G++ + ++ GF + TP IV + GF + A+ ++Y ++ +Q L+GT+
Sbjct: 173 LQLGMLQLAAQKAVQHGFELMITPVIVNPESMSGTGFLGQHAD-EIYYLQEDNQYLVGTS 231
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E+ + G H I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+P
Sbjct: 232 EVALAGYHSKEIIDLSAGPKRYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFSYCKP 291
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E++ + H++L+ +E ++ +++ + ++++
Sbjct: 292 EDAAAEHQKLLSMEREMLAAVEVPYRII 319
>gi|347827025|emb|CCD42722.1| similar to seryl-tRNA synthetase [Botryotinia fuckeliana]
Length = 506
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 180/356 (50%), Gaps = 42/356 (11%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVA 128
K +ID K IR N E + RN ++ L+E+ + Q++ LRE N +
Sbjct: 44 KQSIDIKHIRTNPELYETSCLERNYKLQSTYPAKIINLFEQWHDYQRDARSLRERNNKLK 103
Query: 129 NKMKG-------------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
++ KL ++++I E ++LK+ + +E L E+ A I
Sbjct: 104 LQLANPKAIRDDGSEEIQKLRALSKEEIIAEARSLKDKISEIESSESMLMTEINTLASAI 163
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFP--------VKDHFQLGKALDIFDFDAAAE 227
PN+T P G E K +G + P + H +G L++ DF +AA
Sbjct: 164 PNLTSDSTPRGSEP-----KVIGTINEHPEPKAASSDRVWRSHVHIGSELNLLDFSSAAN 218
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-- 285
SG +YYL N A +LE LI ++LS + +G++ ++ P +V S + CGFQPR +
Sbjct: 219 TSGWGWYYLLNGAALLEQALIQYSLSLALSKGWSIVSPPSMVYSHIASACGFQPRDQSDE 278
Query: 286 TQVYSIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAG 336
Q+YSI + L GTAEIP+ G+ ++ L ESLLPLK A S C+R EAG
Sbjct: 279 QQIYSITQSPSDAESAKPTYSLAGTAEIPLAGMKANTTLHESLLPLKTIATSRCYRAEAG 338
Query: 337 AAGTATRGLYRVHQFSKLEMFVFCQPE--ESDSYHEELIRIEEDLYSSLGLHFKLL 390
A G T+GLYRVH+F+K+EMF + P E+ E++ ++ + +SL LH ++L
Sbjct: 339 ARGIDTKGLYRVHEFTKVEMFAWTSPSLPETTEIFNEMLSLQTTILTSLDLHCRIL 394
>gi|297621844|ref|YP_003709981.1| Seryl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
gi|297377145|gb|ADI38975.1| Seryl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
Length = 423
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 189/326 (57%), Gaps = 9/326 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
ID K IR N+E + ++ + +L +LEL +K+ ++ +V++L+ ERN V+ K M
Sbjct: 2 IDIKLIRANREEIEEKLKRKEPGISLFPILELDQKIRGLKTKVEQLKSERNHVSKKIGEM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC- 190
K K E S GK+ + + ++ +L L ++ + E +PN+ D+ + +
Sbjct: 62 KRKGEDSSAMMSEVSGKSAE--IHAIDHELGPLEEKFRLELAKLPNLPMDDIKIHDDPAE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+++ K G F+FP K+H +L + L +FDF A+++GS + + LE L+++
Sbjct: 120 NVMIKEFGEKREFDFPFKNHVELNEQLKLFDFVRGAKIAGSGWPIYRGWGARLEWALLHY 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIPVGG 308
+S IK GFT P +VR V+ G P+ AN Q ++I E + LI TAE+P+ G
Sbjct: 180 MMSVNIKNGFTQWMPPALVRPEVMFGSGQLPKFANQQ-FAIHDEEYNLFLIPTAEVPLNG 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D IL E LPLKY A++ CFR EAGAAG+ RGL R HQF+K+EMF FC+PEES
Sbjct: 239 LHADEILEEEELPLKYCAYTPCFRREAGAAGSNERGLIRTHQFNKVEMFCFCKPEESGKI 298
Query: 369 HEELIRIEEDLYSSLGLHFKLLLFLA 394
+E+I E++ LGLH++ +L +
Sbjct: 299 FDEMIANAEEILEGLGLHYRNMLLVT 324
>gi|227547744|ref|ZP_03977793.1| seryl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
gi|227080183|gb|EEI18146.1| seryl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
Length = 419
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 177/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +LE E+ + + D LR E+ A K+ G
Sbjct: 2 IDLKFLRENADVVRESQRARGEDPQLVDQLLEADERRRSSIQAADELRSEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK + E + + + + I N+ P GGE+ ++
Sbjct: 61 QAAPEDRPALLEGSNELKARVKEAEAAQDEAEEAVAKLQLRIANVVE-GAPAGGEEDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F V+DH LG+AL I D +V G++FYYL + L++G++
Sbjct: 120 IEHVGEIPEFDFEVRDHLDLGEALGIIDMKRGTKVGGARFYYLVGDGAWLQLGMLMLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT + P +VR ++ GF + ++Y +E D L+GT+E+ + G H
Sbjct: 180 KAREAGFTVVIPPVLVRPDIMAGTGFLD-AHDEEIYYLERDDMYLVGTSEVALAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL YA +S CFR EAG+ G T+G+ RVHQF KLEMFV+C PE+++ H +L+
Sbjct: 239 IIDLSDGPLLYAGWSSCFRREAGSYGKDTKGILRVHQFDKLEMFVYCAPEDAEEMHRKLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
++E D+ S++ + ++++
Sbjct: 299 QLERDMLSAVEVPYRII 315
>gi|116200207|ref|XP_001225915.1| hypothetical protein CHGG_08259 [Chaetomium globosum CBS 148.51]
gi|88179538|gb|EAQ87006.1| hypothetical protein CHGG_08259 [Chaetomium globosum CBS 148.51]
Length = 534
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 34/352 (9%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAV- 127
KAA D K IR N E + N R+RN +A + +L+ + Q+E LRE RN +
Sbjct: 72 KAAPDLKHIRQNPELYAQNCRDRNYHAAAAYPAQINDLFSQWHAKQQEGRSLRERRNLLR 131
Query: 128 ------------ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
A++ R++L++E + +K L +EE L E+Q+ A I
Sbjct: 132 RQLADPGTTRDDADQDAAGFRSLSREQLLDEARKVKTDLSAIEEAESTLAAEMQRLALAI 191
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV----KDHFQLGKALDIFDFDAAAEVSGS 231
PN+T P G E +++ +P P + H +G L I DF AA SG
Sbjct: 192 PNLTSDATPRGNEP-TVLSYINDHPEPGPAPSDRVWRSHVHIGAELGILDFAGAAATSGW 250
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+Y+L +EA LE L+N+ L+ + G+ ++ P +V S + CGFQPR A+ TQ+Y
Sbjct: 251 GWYHLIDEAAQLEQALVNYALTAATRAGWRQVSPPSMVYSHIAGACGFQPRDAHGETQIY 310
Query: 290 SIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGT 340
+I + + L GTAEIP+ G+ D++L E LP K A S C+R EAGA G+
Sbjct: 311 AIAQSAEDAARGKPELSLAGTAEIPLAGMKADTVLDERELPAKRVAASRCYRAEAGARGS 370
Query: 341 ATRGLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
T+GLYRVH+F+K+E+F + P+E + +E++ ++ +L SLGLH ++L
Sbjct: 371 ETKGLYRVHEFTKVELFAWAAPDEGVAQELLDEMVDLQTELLGSLGLHCRVL 422
>gi|354559346|ref|ZP_08978596.1| Seryl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353542935|gb|EHC12395.1| Seryl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 421
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 180/318 (56%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R + E V + RNS+ NL+ L E V EV+ L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRTHPEMVREALNKRNSSLNLDEFLSHEENYRKVLFEVENLKAQRNTVSEEVGRR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + + LI E + + + + LEE L L ++Q IPN+ H VPVG ++ + +
Sbjct: 62 KKNREDAESLILEMREVGQKIKELEEKLNDLEQKMQAVLYEIPNIPHESVPVGPDEFANV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ ++ G+P VF+F K H+ +G+ L+I DF AA+V+G++F + + LE LI++ L
Sbjct: 122 QVRSWGSPRVFDFDPKAHYDVGENLNILDFARAAKVTGARFTFYRGLGAKLERALISFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+T + P +V S + G P+ + I G D LI TAE+PV ++ D
Sbjct: 182 DRHTAKGYTEILPPYMVNRSSMFGTGQLPK-FEEDAFKITGTDYFLIPTAEVPVTNLYRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL +LP+ + A+S CFR+EAG+AG TRGL R HQF+K+E+ F PE S E+L
Sbjct: 241 EILDADMLPMYHCAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELEKL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 301 TRDAEAILQELELPYRVM 318
>gi|375086836|ref|ZP_09733232.1| serine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374564138|gb|EHR35441.1| serine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 426
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 180/322 (55%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
+D K++RDN E V N++NRN+ NL+ +EL ++ + E + L+ ++NAV+ K M
Sbjct: 2 LDIKFVRDNPELVLQNLKNRNNPMNLDRFMELEKQRREIIAETENLKSQKNAVSKKISEM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K E ++ +I E + + E + L++ L ++ DEL IPNM H VPVG +D
Sbjct: 62 KKNKENAD--AVILEMRQVGEKISQLDKQLREVQDELHDILLRIPNMCHESVPVGKDDSD 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R+ G P F+F K H+ +G LDI D + AA+V+G++F + K LE LIN
Sbjct: 120 NPEVRRW-GTPREFDFEPKAHWDIGADLDILDPERAAKVTGTRFTFYKGLGARLERALIN 178
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + V K+G+T + P I + G P+ + ++ +EG D L+ T E+P
Sbjct: 179 FMMDLHVDKQGYTEMLAPFIANKDSMTGTGQLPKFSE-DMFKLEGLDYYLVPTGEVPATN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL LP Y+ ++ CFR EAG+AG TRGL R HQF+K+EM F +PE S
Sbjct: 238 FHRDEILDGDKLPEYYSVYTACFRAEAGSAGRDTRGLIRQHQFNKVEMIKFVKPETSYDE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+++ E++ L + + ++
Sbjct: 298 LEKMVNNAEEVLQLLEIPYHVV 319
>gi|67971104|dbj|BAE01894.1| unnamed protein product [Macaca fascicularis]
gi|380790445|gb|AFE67098.1| seryl-tRNA synthetase, mitochondrial isoform b precursor [Macaca
mulatta]
gi|384940236|gb|AFI33723.1| seryl-tRNA synthetase, mitochondrial isoform b precursor [Macaca
mulatta]
Length = 518
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 159/273 (58%), Gaps = 7/273 (2%)
Query: 124 RNAVANKMKGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
R +AN+ G+++ R Q L G+ +++ L L +L ++ +A +PN THPD
Sbjct: 118 RALLANQDSGEVQQDPRYQSLRARGREMRKQLFPLYPREAQLEEQFYLQALKLPNQTHPD 177
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VPVG E + + VG+ F+F + H ++G+ LDI + VSG + YYL+ +
Sbjct: 178 VPVGDESQAQVLHVVGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAL 237
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLI 299
L+ GL+N+T +++++RGFTP+T P+++R +V E CG P + +Y+I+ A D L
Sbjct: 238 LQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTPNANPSHIYNIDPARFEDLNLA 297
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GTAE+ + G MD ++ LP++ S C+R E G RGLYRVH F+K+EMF
Sbjct: 298 GTAEVGLAGYFMDHAVAFRDLPVRMVCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGV 356
Query: 360 CQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
P E+S EE + ++ ++ + LGLHF++L
Sbjct: 357 TGPGLEQSSQLLEEFLSLQMEILTELGLHFRVL 389
>gi|332158998|ref|YP_004424277.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034461|gb|AEC52273.1| seryl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 456
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 26/341 (7%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N + V ++ R ++ + L+L + KE+++LR ERN +A ++
Sbjct: 2 LDIKLIRENPDLVKNDLIKRGELEKVKWIDEILKLDAEWRAKLKEINKLRHERNKIAIEI 61
Query: 132 KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K + E L+ + K + + TLE+++ +L + +PN+THP VPVG E+
Sbjct: 62 GNKRKRGEPIDDLLAKSKEIVRRIETLEKEVEELRKRIDYYLWRLPNITHPTVPVGKDEN 121
Query: 190 CSIIRKTVGNPSVFN--------------------FPVKDHFQLGKALDIFDFDAAAEVS 229
++ + G V+ + + H L + L DF AA+VS
Sbjct: 122 DNVPIRFWGKAKVWKGHLERFLEQSQGKMEYEVLEWKPRLHVDLLEILGGADFARAAKVS 181
Query: 230 GSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY 289
GS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR VE+ +Y
Sbjct: 182 GSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRR-FVEEGSTTFEDFEDVIY 240
Query: 290 SIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVH 349
+EG D LI TAE P+ G+H + IL LPL Y S CFR EAG AG T+G++RVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 350 QFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
QF K+E FV+ +PEES +HE +IR E+L+ L + ++++
Sbjct: 301 QFHKVEQFVYSRPEESWEWHERIIRNAEELFQELEIPYRVV 341
>gi|157819737|ref|NP_001099710.1| seryl-tRNA synthetase, mitochondrial [Rattus norvegicus]
gi|149056448|gb|EDM07879.1| seryl-tRNA synthetase 2 (predicted) [Rattus norvegicus]
Length = 518
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 150/255 (58%), Gaps = 6/255 (2%)
Query: 141 QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNP 200
Q L G+ +++ L L +L +E Q+A +PN THPD PVG E + + + VG+
Sbjct: 136 QGLRTRGREIRKQLTPLYPRETQLEEEFYQQALRLPNQTHPDTPVGDESQARVLRVVGDK 195
Query: 201 SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGF 260
F+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+TLS+++ RGF
Sbjct: 196 PAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLSKLVSRGF 255
Query: 261 TPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSE 317
TP+T P+++R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++
Sbjct: 256 TPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHAVAS 315
Query: 318 SLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRI 375
LP++ S C+R E G GLYRVH F+K+EMF P E+S EE + +
Sbjct: 316 RDLPVRMVCASTCYRAETD-TGKEPWGLYRVHHFAKVEMFGVTGPGLEQSSQLLEEFLSL 374
Query: 376 EEDLYSSLGLHFKLL 390
+ ++ + LGLHF++L
Sbjct: 375 QVEILTELGLHFRVL 389
>gi|296417449|ref|XP_002838370.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634299|emb|CAZ82561.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 212/425 (49%), Gaps = 61/425 (14%)
Query: 13 FSSSCFMFRPVTKTLGLISRRNHSQKPPFRLLARAFS-APALQTIDTTDNKGGVAVKPQW 71
+ + F++RP + + N +P R +R FS P LQ +
Sbjct: 1 MARNLFIYRPGASSTAWVCS-NCRPRPMRR--SRCFSIKPDLQPPPSAP----------- 46
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNA---NLELVLELYEKMLNVQKEVDRLREERNAVA 128
K I K IR+ E N NRN + E ++ L+ + + +QK + +E +N ++
Sbjct: 47 KPTISVKSIREFPEYHRQNCLNRNYPSLADAPERIIALHGEWIGLQKGLRGDKERQNTLS 106
Query: 129 NKMK-------GKLEPSERQKLIEEGKNLKEGLVTLEEDL-VKLT----------DELQQ 170
+++ G ++ ++ EG+ K+ L+ +D+ K++ +E++
Sbjct: 107 AQLRSRNPLARGPHGGGDKTEVAAEGQEAKKSLLAEAKDVKAKISEVEERERVLENEMKS 166
Query: 171 EAQCIPNMTHPDVPVGGED--CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEV 228
A +PN TH + P+G E I + PS P H Q+G L + DF AA V
Sbjct: 167 LAIQLPNWTHKESPIGTEPKLLGYINPELAPPSQRTGPRISHIQIGAELGLLDFSAAGTV 226
Query: 229 SGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG--ANT 286
SG +YYL NEAV+LE L+N+ LS +KRG+ +T P IV S + CGF+PR
Sbjct: 227 SGWGWYYLLNEAVLLEQALVNYALSFAMKRGWKLVTPPNIVYSHMAAACGFRPRDQHGEQ 286
Query: 287 QVYSIEGA----DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTAT 342
Q+Y+++GA + CL GTAEIP+ G++ + +E LP+K +R EAGA G +
Sbjct: 287 QIYTLDGAEGKIEHCLAGTAEIPLAGMYANKTFAEDQLPVKLVGVGRAYRAEAGARGAES 346
Query: 343 RGLYRVHQFSKLEMFVFCQPEE-----------------SDSYHEELIRIEEDLYSSLGL 385
+GL+RVH+F+K+E+F + P + S S EE++ +++ + SSLGL
Sbjct: 347 KGLFRVHEFTKVELFAWGPPGQEEFSTPNSEPITATIITSASLFEEMLDLQKSIISSLGL 406
Query: 386 HFKLL 390
H ++L
Sbjct: 407 HARIL 411
>gi|302344707|ref|YP_003809236.1| seryl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301641320|gb|ADK86642.1| seryl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 426
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 173/321 (53%), Gaps = 4/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R+N + V +I RN +LE L E+ V E++ LR RN V+ ++ +
Sbjct: 2 LDLKFVRENFDLVQRSIAQRNGKVDLETYGRLDERRRQVLPELESLRSTRNDVSAQVARL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + L E+ K++ + LE +L ++ EL Q IPN+ H PVG GE+ +
Sbjct: 62 KKAGEDASGLFEQMKDVGARIKDLEAELAQVEQELGQLMLTIPNLPHQSTPVGKGEEDNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P VF+F +H+ +G LDI DF+ A ++GS+F +K LE LI L
Sbjct: 122 VVSVWGQPPVFDFEPLNHWDIGVNLDIIDFERAVRMAGSRFAVMKGAGARLERALIGLML 181
Query: 253 -SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ G+T + P +V + + G P+ A + +EGAD LI TAE+P+ +HM
Sbjct: 182 DTHTTAHGYTEILPPLMVNTRALTGTGQLPKFAEDS-FKVEGADYWLIPTAEVPLTNLHM 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D +L LPL Y A++ CFR EAG+ G RGL R+HQF K+E+ C+PE+S E
Sbjct: 241 DEVLDGDKLPLCYTAYTPCFRAEAGSHGKDVRGLIRLHQFDKVELVRICRPEDSYENLEV 300
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L E + LGL ++ ++
Sbjct: 301 LTGHAEAILRLLGLPYRKIVL 321
>gi|444306704|ref|ZP_21142463.1| seryl-tRNA ligase [Arthrobacter sp. SJCon]
gi|443480982|gb|ELT43918.1| seryl-tRNA ligase [Arthrobacter sp. SJCon]
Length = 407
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 177/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+NA K+
Sbjct: 3 IDVKDLSENPDKFRASQRARGADESVVDAIIAADSARRAALIRFENLRAEQNAFGKKV-A 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + + + ++ + IPN+ VP GGED ++
Sbjct: 62 QAKGEEKQALLAEVKELANSVKAASAEADAAQTKQEELLRTIPNLIEDGVPEGGEDDYVV 121
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F +DH ++G+ + D + A+VSG++FY+L+ LEM L+ +
Sbjct: 122 VKTVGTPREFPDFEPRDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAM 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D
Sbjct: 182 DQAIENGFVPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVSLAGYHAD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + H+ L
Sbjct: 241 EILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHQRL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 301 LAWEEEMLAKCELPYRVI 318
>gi|377570232|ref|ZP_09799377.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
gi|377532506|dbj|GAB44542.1| seryl-tRNA synthetase [Gordonia terrae NBRC 100016]
Length = 419
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 180/318 (56%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V + R R + L + +L + E D LR E+ + ++ G
Sbjct: 2 IDLKTVRDNPDLVRTSQRTRGEDPGLVDALLAADAERRAAIVEADALRSEQKTLGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + E+Q L+ +GK L E + + + + I N+ P GGED ++
Sbjct: 61 KAQGEEKQALLAKGKELAEQVKAAVARQSEADAAAAKAHRAISNIVADGAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + L++ L+N
Sbjct: 121 LEHVGEPRDIENP-KDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAQLQLALLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HMD
Sbjct: 180 KATANGFTLMIPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+ L
Sbjct: 239 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAEAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+D+ +++ + ++++
Sbjct: 299 LGWEKDMLAAIDVPYRVI 316
>gi|433650764|ref|YP_007295766.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
gi|433300541|gb|AGB26361.1| seryl-tRNA synthetase [Mycobacterium smegmatis JS623]
Length = 419
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 177/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + L + + E + D +R E+ +++ ++ G
Sbjct: 2 IDLKLLRENPDLVRASQRARGEDPTLVDALREADSARRSAVSTADNMRAEQKSLSKRV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+E+ K E + E + + IPN+ VP GGED +
Sbjct: 61 KASPDERPALLEQAKTFAEKVKVAEAEQAAAENAFTAAHMAIPNVIINGVPAGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P P KDH +LG++L + D + A+VSGS+FY+L +L++GL+ +
Sbjct: 121 LDTVGKPPAIEAP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGAGALLQLGLLQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
GFT + P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H +
Sbjct: 180 LATANGFTLVIPPVLVRPEVMAGTGFLGAHAD-EVYRVEADDLYLVGTSEVPLAGYHANE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+ L+
Sbjct: 239 ILDLSDGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDAEAEHDRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ + + + + ++++
Sbjct: 299 GWQRQMLAQIEVPYRVI 315
>gi|224368220|ref|YP_002602383.1| SerS protein [Desulfobacterium autotrophicum HRM2]
gi|259511665|sp|C0QLD3.1|SYS_DESAH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|223690936|gb|ACN14219.1| SerS [Desulfobacterium autotrophicum HRM2]
Length = 427
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 178/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
++ K++R+N E V + R A+ E +K + ++++ LR +RN V++++ +
Sbjct: 2 LEIKYVRENIEEVKQALAKRAGKADFEGFARAEKKRRELLQQIEELRHQRNTVSDEIARM 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + I E + + + + TL++ L + D +QQ IPNM HPDVP+G D +
Sbjct: 62 KRNKEDAGTSILEMRTVSDEIKTLDKTLAEQDDFIQQFMMAIPNMPHPDVPMGASDADNT 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG P F+FP+K H+ +G+ L I DF AA+++G++F LE LIN+ L
Sbjct: 122 LEKKVGTPRSFDFPIKAHWDIGEDLGILDFPRAAKITGARFSLYLGSGAKLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ G+T P IV + G P+ ++ IEG + LI T+E+P+ I+
Sbjct: 182 DLHTNEHGYTETLPPFIVNRESLLGTGQLPK-FEEDLFKIEGQEYYLIPTSEVPMTNIYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D +L+E LP+K+ A++ CFR+EAG+ G TRGL R HQF+K+E+ + PE S E
Sbjct: 241 DEVLNEENLPIKFTAYTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKYTTPETSYQELES 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + LGL ++++
Sbjct: 301 LLANAETVLKRLGLPYQVV 319
>gi|213965358|ref|ZP_03393554.1| seryl-tRNA synthetase [Corynebacterium amycolatum SK46]
gi|213951974|gb|EEB63360.1| seryl-tRNA synthetase [Corynebacterium amycolatum SK46]
Length = 423
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N E + R R + A ++ +LE K V D LR E+ K+ G
Sbjct: 2 IDLKFLRENPEVARESQRTRGEDPALVDQLLEADAKRREVIASTDALRSEQKGFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ER ++E+ K L + + E + + E+++ I N+ P GGED ++
Sbjct: 61 QASKEERPAMLEKAKELSDAVKAAEAEQKEAEAEVERLQYLIGNIV-TGAPAGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +G F+F KDH LG++L + D + +VSGS+FY+L ML++ ++N
Sbjct: 120 LEEIGEIPQFDFEPKDHLDLGESLGLIDMERGVKVSGSRFYFLTGYGAMLQLAMMNLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF + P +VR + GF GA++ ++Y ++ D L+GT+E+ + G H +
Sbjct: 180 KAIQNGFQLMVPPVLVRPETMAGTGFL--GAHSDEIYYLQEDDLYLVGTSEVALAGYHSN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF KLEMF +C PE++++ H++L
Sbjct: 238 EIIDLSEGPRRYAGWSSCFRREAGSYGKDTRGILRVHQFDKLEMFSYCPPEQAEAEHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E ++ +++ + ++++
Sbjct: 298 LNMEREMLAAVEVPYRII 315
>gi|327289361|ref|XP_003229393.1| PREDICTED: LOW QUALITY PROTEIN: seryl-tRNA synthetase,
mitochondrial-like [Anolis carolinensis]
Length = 511
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 194/348 (55%), Gaps = 23/348 (6%)
Query: 62 KGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNS---NANLELVLELYEKMLNVQKEVD 118
+ G +PQ ID + ++ EA + +R +L +L +++K++ VQ+E+
Sbjct: 49 RDGWTARPQ----IDVEALKVRLEAAERELESRKGPLRAQDLRQILAVWQKLVEVQEEIA 104
Query: 119 RLREERNAVANKMKGKLEPSERQK---------LIEEGKNLKEGLVTLEEDLVKLTDELQ 169
+ E+N VA ++ ++ + L ++G++L+ L L ++ ++L ++
Sbjct: 105 TVETEKNRVAENVRILVKSQDSNTSQSLPLYDALRKQGRDLRLRLNALRQEEMELDEKYY 164
Query: 170 QEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVS 229
A +PN THPDVP+G E + + +TVG+ VF+F VK H +LG+ L I + VS
Sbjct: 165 LLALKLPNRTHPDVPIGDESQAKVIETVGSKPVFDFEVKGHLELGEELGIIRQRRLSHVS 224
Query: 230 GSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY 289
G + YYL+ +L+ L+ + L +++K+GF P+ P++++ +V E CG P + +Q+Y
Sbjct: 225 GHRSYYLRGAGAILQQALVQFALKKLMKKGFIPMAVPDLLKGAVFEGCGMLPDASPSQLY 284
Query: 290 SIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLY 346
+I+ + D L GT+E+ + G MD + +P++ S C+R E G GLY
Sbjct: 285 NIDPSRFEDLSLAGTSEVGIAGYFMDHAVDLKDMPVRTVCSSTCYRAETD-TGKDPWGLY 343
Query: 347 RVHQFSKLEMFVFCQPE---ESDSYHEELIRIEEDLYSSLGLHFKLLL 391
RVHQF+K+EMF E ES + EE + ++++++S LGLHFK +L
Sbjct: 344 RVHQFAKVEMFGVTANETGLESAALLEEFLTLQKEIFSELGLHFKXVL 391
>gi|453365008|dbj|GAC79260.1| seryl-tRNA synthetase [Gordonia malaquae NBRC 108250]
Length = 418
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 183/320 (57%), Gaps = 10/320 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V A+ R R + A ++ +L+ E D LR E+ A+ ++ G
Sbjct: 2 IDLKILRDNPDLVRASQRTRGEDPALVDQLLQADVDRRAAIAEADALRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC---IPNMTHPDVPVGGEDC 190
K E+ L+ GK L E ++ + + ++ + +C I N+ P GGED
Sbjct: 61 KASGDEKTALLARGKELAE---QVKAAVARQSEADETATRCQRAISNIVSEATPPGGEDD 117
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + VG P P KDH ++G+ L + D A+VSGS+FY+L L++GL+N
Sbjct: 118 YVVIEHVGEPREIVDP-KDHLEIGERLGLIDMARGAKVSGSRFYFLTGLGAQLQLGLLNM 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
++ GFT + P +VR V++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 177 AAAKATANGFTLMIPPVLVRPEVMQGTGFLGSHAD-EVYRLEADDMYLVGTSEVPLAGYH 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+
Sbjct: 236 SDEILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAEAEHQ 295
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+D+ +++ + ++++
Sbjct: 296 RLLAWEKDMLAAIDVPYRVI 315
>gi|269926095|ref|YP_003322718.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269789755|gb|ACZ41896.1| seryl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 423
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 175/318 (55%), Gaps = 2/318 (0%)
Query: 74 AIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D + IR++ + V A ++ R S+A ++ V+ L + + EV+ LR ERN V+ ++
Sbjct: 2 VLDLRLIREHPDIVKAGLKRRGSDAPIDEVIALDSRRRKILTEVEGLRSERNKVSKQIPR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
+ +ER+ LI + + + +LE +L ++ +L IPN+ P+VP G ++ ++
Sbjct: 62 ISDKTERESLISRMRQVGNQIESLESELREVESKLHTLLLQIPNIPDPEVPDGKDESDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + G P F + H+++G+ L I DF ++SGS+FY L + L+ LI W L
Sbjct: 122 VVRQHGEPRELPFDARPHWEIGERLGIIDFAQGQKISGSRFYVLHGDGARLQRALITWML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ G+ + P IV+ + P +T + +E D I TAE P+ GIHM+
Sbjct: 182 DLRRQEGYKEVYPPAIVKEETLWASAHLPDFEDTMYHDVED-DVWFIPTAEAPLTGIHMN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ LP++YAA++ CFR E +AG RG+ R HQF K+EM+ + PE+S + EEL
Sbjct: 241 EIIPVESLPIRYAAYTPCFRREKMSAGKDVRGIKRGHQFDKVEMYHYTLPEDSPKHLEEL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
++ ED LGL +++
Sbjct: 301 VKHAEDTAIKLGLTCRVV 318
>gi|358381053|gb|EHK18729.1| hypothetical protein TRIVIDRAFT_172396 [Trichoderma virens Gv29-8]
Length = 507
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 190/382 (49%), Gaps = 39/382 (10%)
Query: 39 PPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRN--- 95
P +RL AR A + + + A KP ID K IR N E RN
Sbjct: 11 PQWRLQARILYARSFSDV----KRPSSAPKP----IIDIKHIRQNPELYEHTCLERNYKR 62
Query: 96 SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE-----------RQKLI 144
++ + +L+ + +QK+ LRE N + ++ ++ R+K+
Sbjct: 63 QASHPARIGQLHAEWQQLQKDGRALRERSNLLRKELANSATSTDDEDLKDVKEMSREKVQ 122
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN 204
EE + LK LV +E+ ++++ A IPN+T D P G E ++ PS
Sbjct: 123 EEARALKSELVVIEKKEADAVAQMEELALEIPNLTSADTPKGDE-AEVLSYINEPPSFEQ 181
Query: 205 FP---VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFT 261
P + H +G L I DF AA SG +YYL EA LE LI + L+ K G+T
Sbjct: 182 GPEQLWRSHVHIGAELGILDFAGAATASGWGWYYLLGEAAQLEQALIQYALTVATKHGWT 241
Query: 262 PLTTPEIVRSSVVEKCGFQPR--GANTQVYSIEGA---------DQCLIGTAEIPVGGIH 310
++ P +V S + CGFQPR QVY+I + + CL GT+EIP+ G+
Sbjct: 242 QVSPPSMVYSHIGAACGFQPRDQSGEQQVYAIAQSQADADRGVPEMCLAGTSEIPLAGMK 301
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH- 369
S + LPLK A S C+R EAGA G T+GLYRVH+FSK+EMF + P+E ++
Sbjct: 302 AMSTIDAVDLPLKRVAVSRCYRAEAGARGAETKGLYRVHEFSKVEMFAWTSPDEFEAREV 361
Query: 370 -EELIRIEEDLYSSLGLHFKLL 390
+E++ ++ ++ SSLGL+ ++L
Sbjct: 362 FDEMLDMQTEILSSLGLYCRVL 383
>gi|325282734|ref|YP_004255275.1| Seryl-tRNA synthetase [Deinococcus proteolyticus MRP]
gi|324314543|gb|ADY25658.1| Seryl-tRNA synthetase [Deinococcus proteolyticus MRP]
Length = 423
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 177/316 (56%), Gaps = 3/316 (0%)
Query: 76 DFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL 135
D ++IR+N + V I ++ + +L+ VL +L ++++V+ L+ ERNA A K+ K
Sbjct: 3 DIRFIRENPDTVRKAIADKFVSLDLDAVLAADRAVLELRQQVETLQAERNANA-KLVPKA 61
Query: 136 EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSIIR 194
ER LIE+GK L L LE L + + L+ +PN+ H PVG +D ++
Sbjct: 62 SAEERPALIEKGKALGAQLAELEPQLREQEEALRSLLLRVPNVPHGSAPVGPSDDDNVEL 121
Query: 195 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE 254
+ G F F DH L + D + A VSGS+ Y LK EA LEM ++ + L
Sbjct: 122 RREGQLPTFKFQPLDHVDLLELQGWSDPERVARVSGSRSYLLKGEAARLEMAILTFALDF 181
Query: 255 VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSI 314
+ +RG L+T +VR + G P G QVY +E + L GT+E+P+ ++ I
Sbjct: 182 LAERGLEMLSTTALVRPETLTATGHFP-GGEDQVYRLEDEELMLAGTSEVPINSLYAGEI 240
Query: 315 LSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIR 374
L+ES LPL +A FS FR+EAG+AG RGL RVH+F K+E +V C+PE+ ++ E+L+
Sbjct: 241 LAESDLPLAFAGFSAAFRSEAGSAGRDVRGLIRVHEFRKVEQYVICRPEDGMAWFEKLLA 300
Query: 375 IEEDLYSSLGLHFKLL 390
E + +L L ++++
Sbjct: 301 NAEGILQALELPYRVV 316
>gi|404446115|ref|ZP_11011237.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
gi|403651007|gb|EJZ06179.1| seryl-tRNA ligase [Mycobacterium vaccae ATCC 25954]
Length = 419
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 173/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ R + L + + E D LR E+ A A+++ G
Sbjct: 2 IDLKVLRENPDAVRASQLARGEDPGLVDALAEADVARRAAISAADNLRAEQKA-ASRLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + +E + I N+ VP GGED ++
Sbjct: 61 KASPEERPALLAAAKELAEKVKAVEAAQSEAEQAYTAAHMAISNVIIDGVPSGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P P KDH +LG+AL + D + A+VSGS+FY+L +L++GL +
Sbjct: 121 LDTVGEPPALTDP-KDHLELGEALGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 TATENGFTLMVPPVLVRPEIMAGTGFLGAHAD-EVYRVEADDLYLVGTSEVPLAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ H+ L+
Sbjct: 239 ILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEDAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ + + + ++++
Sbjct: 299 GWQRQMLGLIEVPYRVI 315
>gi|359426209|ref|ZP_09217295.1| seryl-tRNA synthetase [Gordonia amarae NBRC 15530]
gi|358238480|dbj|GAB06877.1| seryl-tRNA synthetase [Gordonia amarae NBRC 15530]
Length = 418
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 182/318 (57%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RDN + V A+ R R + L + +L E DRLR E+ A+ ++ G
Sbjct: 2 IDLKILRDNPDLVRASQRKRGEDEGLVDALLAADATRRQSILEADRLRAEQKALGRQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ GK L E + + + + + I N+ + P GGED I+
Sbjct: 61 KAAGDEKTALLARGKELAEQVKAAVANQNEADEASAAAHRSISNIVADEAPAGGEDDYIV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P + P KDH +LG++L + D +VSGS+FY+L + +L++GL+N +
Sbjct: 121 LEHVGEPRKLDDP-KDHLELGESLGLIDMKRGTKVSGSRFYFLTGQGALLQLGLLNMAAA 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + FT + P +VR V+ GF GA++ ++Y + D L+GT+E+P+ G HMD
Sbjct: 180 KAVANDFTLMVPPVLVRPEVMAGTGFL--GAHSAEIYHLPDDDLYLVGTSEVPLAGYHMD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H +L
Sbjct: 238 EILDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHRKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E ++ +++ + ++++
Sbjct: 298 LGWEREMLAAIDVPYRVI 315
>gi|119963396|ref|YP_945932.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|166200596|sp|A1R120.1|SYS_ARTAT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119950255|gb|ABM09166.1| seryl-tRNA synthetase [Arthrobacter aurescens TC1]
Length = 426
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 176/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+NA K+
Sbjct: 2 IDVKDLSENPDKFRASQRARGADESVVDAIISADSDRRAALIRHETLRAEQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + + + ++ + IPN+ VP GGED ++
Sbjct: 61 QAKGEEKQALLAEVKELANSVKAASAEAAAAQAKQEELLRVIPNLVVDGVPEGGEDDYVV 120
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ +
Sbjct: 121 LKTVGTPREFTDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAM 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D
Sbjct: 181 EQAIDAGFVPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVALAGYHAD 239
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + HE L
Sbjct: 240 EILDLSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHERL 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 300 LAWEEEMLAKCELPYRVI 317
>gi|333986647|ref|YP_004519254.1| seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
gi|333824791|gb|AEG17453.1| Seryl-tRNA synthetase [Methanobacterium sp. SWAN-1]
Length = 429
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 179/322 (55%), Gaps = 9/322 (2%)
Query: 75 IDFKWIRDNKEAV--SANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
+D K R+N + + S IR RN+ N++ V+E +K ++++ LR ERN ++ K
Sbjct: 2 LDIKLFRENSDLIRKSEKIRFRNTK-NVDKVIEYDKKWREGIQKLNSLRAERNTLSKSFK 60
Query: 133 G--KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--E 188
K P E +KL + K + + LE + + + + + N+ VPV E
Sbjct: 61 KARKQGPEELKKLQIKAKEVAGEVTVLEPQIAEFIQKRDEYRYKVGNIVDETVPVSETEE 120
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D IIRK+ PS F+F + H L + +D D AAEV+G++FYYLK + V L M L+
Sbjct: 121 DNDIIRKSGVIPS-FSFKPQSHVDLIENIDGADIKRAAEVAGARFYYLKADLVYLNMALM 179
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + + ++GFTP TP ++ V+++ T +Y +EG D +I TAE +
Sbjct: 180 KFAIDFLSEQGFTPFYTPFFIKKDVIKETAELADFEET-LYKVEGEDLFMIATAEQTLAA 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H I+ E LP KY S CFR EAG+ G TRG++RVHQF K+E FVFC E+++
Sbjct: 239 LHRGEIIDERTLPRKYCGISTCFRREAGSHGKDTRGIFRVHQFEKIEQFVFCNKEDTEKI 298
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HEEL++ E +Y LG+ ++++
Sbjct: 299 HEELLKNAETIYQKLGIPYRVV 320
>gi|116748863|ref|YP_845550.1| seryl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|166223302|sp|A0LI63.1|SYS_SYNFM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116697927|gb|ABK17115.1| seryl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 423
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 180/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D +++RDN + + +RNR + +L ++EL + + +EV+ L+ RN + ++
Sbjct: 2 LDLRFVRDNVDKIDMMLRNRRMDLSLAPLIELDTQRRRILREVEELKFRRNKASEEISNL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K E + LIEE K + + TL+++L + + + IPNM H VPVG E +
Sbjct: 62 KREKKDSSLLIEEMKEVSRRVKTLDQELTVIEEHFRDFLLLIPNMPHESVPVGADEKDNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ KT G+ +F K H+++G+AL I DF+ AA+++G++F LE LI + L
Sbjct: 122 VAKTWGSKPELDFEPKPHWEIGEALGILDFERAAKIAGARFALYWKMGAALERALIAFML 181
Query: 253 SEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
KR G+T + P IV S+ + G P+ ++ +E D L+ TAE+PV IHM
Sbjct: 182 DIHTKRHGYTEVLPPFIVNSTSLLGTGQLPK-FKEDLFKLEDRDFYLVPTAEVPVTNIHM 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ L ES LP Y AF+ CFR+EAG+ G TRGL R HQF+K+E+ +PE S E+
Sbjct: 241 NETLEESELPKLYTAFTPCFRSEAGSYGKDTRGLIRQHQFNKVELVKLVKPESSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + LGLH++++
Sbjct: 301 LLLDAERILQELGLHYRVV 319
>gi|154313426|ref|XP_001556039.1| hypothetical protein BC1G_05410 [Botryotinia fuckeliana B05.10]
Length = 506
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 180/356 (50%), Gaps = 42/356 (11%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVA 128
K +ID K IR N E + RN ++ L+E+ + Q++ LRE N +
Sbjct: 44 KQSIDTKHIRANPELYETSCLERNYKLQSTYPAKIINLFEQWHDYQRDARSLRERNNKLK 103
Query: 129 NKMKG-------------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
++ KL ++++I E ++LK+ + +E L E+ A I
Sbjct: 104 LQLANPKAIRDDGSEEIQKLRALSKEEIIAEARSLKDKISEIESSESMLMTEINTLASAI 163
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVFNFP--------VKDHFQLGKALDIFDFDAAAE 227
PN+T P G E K +G + P + H +G L++ DF +AA
Sbjct: 164 PNLTSDSTPRGSEP-----KVIGTINEHPEPKAASSDRVWRSHVHIGSELNLLDFSSAAN 218
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-- 285
SG +YYL N A +LE LI ++LS + +G++ ++ P +V S + CGFQPR +
Sbjct: 219 TSGWGWYYLLNGAALLEQALIQYSLSLALSKGWSIVSPPSMVYSHIASACGFQPRDQSDE 278
Query: 286 TQVYSIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAG 336
Q+YSI + L GTAEIP+ G+ ++ L ESLLPLK A S C+R EAG
Sbjct: 279 QQIYSITQSPSDAESAKPTYSLAGTAEIPLAGMKANTTLHESLLPLKTIATSRCYRAEAG 338
Query: 337 AAGTATRGLYRVHQFSKLEMFVFCQPE--ESDSYHEELIRIEEDLYSSLGLHFKLL 390
A G T+GLYRVH+F+K+EMF + P E+ E++ ++ + +SL LH ++L
Sbjct: 339 ARGIDTKGLYRVHEFTKVEMFAWTSPSLPETTEIFNEMLSLQTTILTSLDLHCRIL 394
>gi|339442739|ref|YP_004708744.1| seryl-tRNA synthetase [Clostridium sp. SY8519]
gi|338902140|dbj|BAK47642.1| seryl-tRNA synthetase [Clostridium sp. SY8519]
Length = 425
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 178/324 (54%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANK- 130
ID K++R+N EAV NIRN+ + L LV E+ E K Q+E D LR RN ++ +
Sbjct: 2 IDIKFLRENPEAVKQNIRNKFQDHKLPLVDEVIEYDKKARAAQQEADALRARRNKLSKEI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E Q++ + + L LE + +L ++++ IPN+ P VP+G +
Sbjct: 62 GALMGQGKKEEAQEIKAQVARDADRLKELEAEESELQAQVKERMMKIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + + D DAA V+G+ FYYL+ + L +
Sbjct: 122 DSENVELERFGEPVVPDFEIPYHTEIMERFNGIDLDAARRVAGNGFYYLQGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RSSVV F+ A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMIDRGFTYCVPPFMIRSSVVTGVMSFEEMDA--MMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D +L E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 240 IGKFIDQMLEEDSLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESA 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+++ L + DL+ S+ + + L
Sbjct: 300 MWYDRLWKNTVDLFRSMDIPVRTL 323
>gi|419718057|ref|ZP_14245396.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305777|gb|EIC97123.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 427
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 183/325 (56%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N +AV NI+N+ + L LV +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDAVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRAKRNKISKEI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E+ K +L E L LE +L ++++++ IPN+ P VP+G
Sbjct: 62 GTLMAQGKKEEAEQVKA--SVASLGEQLAKLEPIEAELEEKIKKDMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P + +F + H ++ + L+ D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIEKFGEPFIPDFEIPYHTEIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 239 MIGKFIDTMNEEAKLPYTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEMIVVCKPEES 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 299 KMWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|403525199|ref|YP_006660086.1| seryl-tRNA synthetase SerS [Arthrobacter sp. Rue61a]
gi|403227626|gb|AFR27048.1| seryl-tRNA synthetase SerS [Arthrobacter sp. Rue61a]
Length = 426
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 176/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+NA K+
Sbjct: 2 IDVKDLSENPDKFRASQRARGADESVVDAIISADSDRRAALIRHETLRAEQNAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + + + ++ + IPN+ VP GGED ++
Sbjct: 61 QAKGEEKQALLAEVKELANSVKAASAEAAAAQAKQEELLRVIPNLVVDGVPEGGEDDYVV 120
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ +
Sbjct: 121 VKTVGTPREFTDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAM 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D
Sbjct: 181 EQAIDAGFVPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVALAGYHAD 239
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + HE L
Sbjct: 240 EILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHERL 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 300 LAWEEEMLAKCELPYRVI 317
>gi|220911065|ref|YP_002486374.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|254783002|sp|B8H9Q1.1|SYS_ARTCA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219857943|gb|ACL38285.1| seryl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 426
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 176/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+N K+
Sbjct: 2 IDVKDLSENPDKFRASQRARGADESVVDAIISADSARRAALIRYENLRAEQNVFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + + + ++ + +PN+ VP GGED ++
Sbjct: 61 QAKGEEKQALLAEVKELANSVKAASAEADAAQTKQEELLRTVPNLVEDGVPEGGEDDYVV 120
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F KDH ++G+ + D + A+VSGS+FY+L+ LEM L+ +
Sbjct: 121 VKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGSRFYFLRGVGARLEMALLQMAM 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D
Sbjct: 181 EQAIEAGFIPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVALAGYHAD 239
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + H+ L
Sbjct: 240 EILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHQRL 299
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 300 LAWEEEMLAKCELPYRVI 317
>gi|426388628|ref|XP_004060735.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 2 [Gorilla
gorilla gorilla]
Length = 520
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 176/312 (56%), Gaps = 21/312 (6%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE----RQKLIEEGKNLKE 152
+A+L ++ ++++ +Q+++ L EE+ AV ++ L + +Q ++ G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVQALLANQDSGEVQQVWLDPGAGSIF 142
Query: 153 G---------LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF 203
G L L E +L ++ +A +PN THPDVPVG E + + VG+ VF
Sbjct: 143 GPTFLPFPGQLSLLVE--AQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVF 200
Query: 204 NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPL 263
+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+
Sbjct: 201 SFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPM 260
Query: 264 TTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLL 320
T P+++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ L
Sbjct: 261 TVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDL 320
Query: 321 PLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEED 378
P++ S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ +
Sbjct: 321 PVRMVCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQME 379
Query: 379 LYSSLGLHFKLL 390
+ + LGLHF++L
Sbjct: 380 ILTELGLHFRVL 391
>gi|406957548|gb|EKD85458.1| hypothetical protein ACD_38C00019G0003 [uncultured bacterium]
Length = 410
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 169/323 (52%), Gaps = 15/323 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +IRDN E V +I+ R + +L+ +L L E ++ ++VD LR +RN A
Sbjct: 2 LDINYIRDNLEKVRKSIQARKAGVDLDQLLRLDESRRDLIQKVDALRAKRNEAA------ 55
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+ K IE GK +K L +LE+ L K E +PN+ +VP+G +
Sbjct: 56 -----KAKDIEAGKKIKGELDSLEKQLGKTEKEWNSLMLQVPNILLDEVPIGDVSKNKTI 110
Query: 195 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE 254
+ VG F+F KDH +LGK L+I DF+ + G + YYLKNE L ++ +
Sbjct: 111 EKVGELPEFSFKPKDHIELGKLLNIIDFERGVKTGGFRGYYLKNEGARLHWAVLQFAFDH 170
Query: 255 VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSI 314
+I +GF P+ P I R + G P G Y + D L+GTAEIP+ +H D
Sbjct: 171 LILKGFQPVVPPVINRRFALVGGGQFPWG-EEDTYKVSDED-FLVGTAEIPLMAMHSDET 228
Query: 315 LSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS--YHEEL 372
LP KY S CFRTE G+ G T+GLYRVH+F K+E + C+ +E S + EEL
Sbjct: 229 FDTGDLPKKYVGMSACFRTEIGSYGKDTKGLYRVHEFYKVEQVILCESDEQQSLGFFEEL 288
Query: 373 IRIEEDLYSSLGLHFKLLLFLAE 395
E+L LGL +++++ +E
Sbjct: 289 QENSEELLRKLGLPYQVVVLSSE 311
>gi|350273035|ref|YP_004884343.1| seryl-tRNA synthetase [Oscillibacter valericigenes Sjm18-20]
gi|348597877|dbj|BAL01838.1| seryl-tRNA synthetase [Oscillibacter valericigenes Sjm18-20]
Length = 435
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 180/332 (54%), Gaps = 21/332 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAV---- 127
+D K++R+N +AV NIR + +A L LV +EL K E D+LR +RN +
Sbjct: 2 LDIKFVRENPDAVKENIRKKFQDAKLSLVDEVIELDTKRRAAIAEADQLRADRNRLSKQV 61
Query: 128 ------ANKMKGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
A K KLE +E ++K+ +E L E LE+ +L +E+ + IP +
Sbjct: 62 GMLMGQAKKDSSKLEEAEAVKKKVTDEAARLAE----LEKQEAELDEEVHKRMLVIPQII 117
Query: 180 HPDVPVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKN 238
P VP+G +D + I + G P V +F + H ++ ++ D D DAA VSG+ FYYL
Sbjct: 118 DPSVPLGPDDSANIEVQRFGEPKVPDFDIPYHTEIMESFDGIDMDAAGRVSGNGFYYLLG 177
Query: 239 EAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL 298
+ L ++ + +I +GFT P ++ +VVE Q + +Y IEG D L
Sbjct: 178 DIARLHEAVLAYGRDFMIDKGFTYCIPPFMIHGNVVEGVMSQT-DMDGMMYKIEGEDLYL 236
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
IGT+E + G +D IL ES LP ++S CFR E GA G RG+YR+HQF K EM V
Sbjct: 237 IGTSEHSMIGRFIDQILPESSLPETLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEMIV 296
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PEES ++E+L ++ +L+ S+ + + L
Sbjct: 297 VCKPEESKDWYEKLWKLSVELFRSMDIPVRQL 328
>gi|225378561|ref|ZP_03755782.1| hypothetical protein ROSEINA2194_04229 [Roseburia inulinivorans DSM
16841]
gi|225209609|gb|EEG91963.1| hypothetical protein ROSEINA2194_04229 [Roseburia inulinivorans DSM
16841]
Length = 429
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 176/326 (53%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N E V NI+N+ + L LV +EL K QKE D LR RN ++ ++
Sbjct: 2 IDLKFLRENPEIVKQNIKNKFQDQKLPLVDEVIELDAKARATQKEADELRASRNTLSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K + L LEE +L +++ + IPN+ P VP+G
Sbjct: 62 GQLMGQGKKEEAEAVKAQVSANAAR--LAELEETEKELQEKVTKIMMVIPNIIDPSVPIG 119
Query: 187 GED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D C++ + G P V +F + H + D D DAA +V+G+ FYYL + +
Sbjct: 120 KDDSCNVEIEKFGEPVVPDFEIPYHTDIMDRFDGIDLDAAGKVAGNGFYYLMGDIARIHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSNVVTGVMSFDEMDA--MMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S ++++L + DL+ SL + + L
Sbjct: 298 SKVWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|339006691|ref|ZP_08639266.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|338775900|gb|EGP35428.1| seryl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
Length = 427
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 181/320 (56%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K +R + E V + +RN + + L+ E+ EK + +E D L+ +RN V+ ++
Sbjct: 2 LDVKILRQDLEEVRRRLAHRNEDISALDQFAEVDEKRRQLIQEGDTLKNKRNTVSEQVAV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
K LI E K + E + L+E+L +L ++L +PN+ H P+G ED +
Sbjct: 62 LKRNKENADHLISEMKQVNERIKALDEELRELDEQLTVILLSLPNLPHESTPIGTTEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ + G+ S F+F K H+++ AL I DF+ A++V+GS+F + K LE LIN+
Sbjct: 122 VVHRVWGDASTFSFEPKPHWEVADALGILDFETASKVTGSRFVFYKGMGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+ + P +V + + G P+ + I+G D LI T+E+PV +H
Sbjct: 182 MDLHADKHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFKIDGVDYFLIPTSEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL + LP+KY AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E + LGL ++++
Sbjct: 301 KLVNNAETVLQMLGLPYRVM 320
>gi|300780262|ref|ZP_07090118.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
gi|300534372|gb|EFK55431.1| serine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
Length = 455
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 175/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V A+ R + L + +L E+ D LR E+ A K+ G
Sbjct: 40 IDLKFLRENPDVVRASQHARGEDPGLVDALLAADEERRGAIATADSLRAEQKAFGKKI-G 98
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + + + + I N+ P GGE+ +
Sbjct: 99 QASPEERPALLEGSNELKTKVKEAEEAQKRAEENVVKLQYAISNVIE-GAPAGGEEDFEV 157
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG F+F V+DH LG+AL I D +V G++FYYL + +++G++
Sbjct: 158 LEHVGELPEFDFEVQDHLDLGEALGIIDMKRGTKVGGARFYYLVGDGAWMQLGMLMLAAQ 217
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GF + P +VR ++ GF + ++Y +E D L+GT+E+ + G H D
Sbjct: 218 KAREAGFKVMVPPVLVRPEIMAGTGFLD-AHDEEIYYLERDDLYLVGTSEVALAGYHRDE 276
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL YA +S CFR EAG+ G T+G+ RVHQF KLEMFV+C+PE+++ H++L+
Sbjct: 277 IIDLSDGPLLYAGWSSCFRREAGSYGKDTKGILRVHQFDKLEMFVYCKPEDAEEMHQKLL 336
Query: 374 RIEEDLYSSLGLHFKLL 390
+E ++ +++ + ++++
Sbjct: 337 GLEREMLAAVEVPYRII 353
>gi|396498385|ref|XP_003845212.1| similar to seryl-tRNA synthetase [Leptosphaeria maculans JN3]
gi|312221793|emb|CBY01733.1| similar to seryl-tRNA synthetase [Leptosphaeria maculans JN3]
Length = 509
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 189/367 (51%), Gaps = 48/367 (13%)
Query: 67 VKPQW--KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLR 121
+KP + K +ID K IR N N +RN A+ + ++EL+E+ L +Q+ LR
Sbjct: 40 IKPSFAPKPSIDIKHIRQNPGLYEQNCIDRNYAAHSKASWRIVELHEQWLALQQSSRSLR 99
Query: 122 EERN-------AVANKMK---GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE 171
E N VA K+K G + +I + + K L +E ++ +E++
Sbjct: 100 ERSNQLRAQLAKVATKLKATDGNTVVPNQGAIITKAQETKAELKAIEAQETQIQEEMEAL 159
Query: 172 AQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFP-----VKDHFQLGKALDIFDFDAAA 226
AQ +PN++ P+G + +T+G + P K H +G+ L I DF A+A
Sbjct: 160 AQDLPNLSSVHTPLGTDP-----ETLGFINEHRKPDRSRAGKSHVDIGQQLGILDFAASA 214
Query: 227 EVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN- 285
SG +Y+L + MLE L+ + LS +G+ + P +V S V CGFQPR N
Sbjct: 215 HTSGWGWYFLVGDGAMLEQALVQYALSVARSKGWKAVAPPSLVYSHVASACGFQPRDQNG 274
Query: 286 -TQVYSIEGADQ-------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGA 337
Q+Y+IE +D+ L GTAEIP+ G+ + L ++ LPLK S C+R EAGA
Sbjct: 275 EQQIYAIEQSDKDKAKPQLALAGTAEIPLAGMKAHTTLDQAELPLKTVGVSRCYRAEAGA 334
Query: 338 AGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--------------EELIRIEEDLYSSL 383
G T+GLYRVH+F+K+EMF + P+ H +E++ I++++ S+L
Sbjct: 335 RGAETKGLYRVHEFTKVEMFAWTSPDNMGEDHFSSASATTSSQVVLDEMLSIQKEILSAL 394
Query: 384 GLHFKLL 390
GLH ++L
Sbjct: 395 GLHCRIL 401
>gi|226309605|ref|YP_002769499.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254783010|sp|C0ZH54.1|SYS_BREBN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|226092553|dbj|BAH40995.1| seryl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 426
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 183/322 (56%), Gaps = 9/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
+D K +R + E V + +RN + + L+ +E+ EK V +E + L+ +RN V+ +
Sbjct: 2 LDVKVLRQDLEEVKRRLAHRNEDISALDQFVEVDEKRREVIQEAEALKNKRNTVSEQVAV 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-ED 189
MK E ++ LI E K + E + L+E+L +L ++L+ +PN+ H P+G ED
Sbjct: 62 MKRNKENADH--LIAEMKEVNERIKALDEELRQLDEQLEFILLSLPNLPHESTPIGTTED 119
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++I T G P F+F +K H++L I DF+ AA+V+GS+F + K LE L+N
Sbjct: 120 DNVIAWTWGEPRAFDFEIKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLERALMN 179
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + + G+ + P IV + + G P+ + IEG D LI TAE+PV
Sbjct: 180 FMMDLHSNEHGYEEVIPPFIVNRTSMTGTGQLPK-FEEDAFKIEGPDYFLIPTAEVPVTN 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D I+ + LP Y AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PEES
Sbjct: 239 MHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYDE 298
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
++L++ E + LGL +++L
Sbjct: 299 LDKLVKNAEKVLQLLGLPYRVL 320
>gi|332242520|ref|XP_003270433.1| PREDICTED: LOW QUALITY PROTEIN: serine--tRNA ligase, mitochondrial
[Nomascus leucogenys]
Length = 520
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 175/310 (56%), Gaps = 17/310 (5%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---EPSERQKLIEE---GKNL 150
+A+L ++ ++++ +++++ L EE+ AV ++ L + E Q++ + G
Sbjct: 83 SADLPAIISTWQELRQLREQIRSLEEEKAAVTEAVRALLANQDSGEVQQVWLDPGAGSIF 142
Query: 151 KEGLVTLEEDL-----VKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNF 205
+ L +L ++ +A +PN THPDVPVG E + + VG+ VF+F
Sbjct: 143 GPAFLPFPGQLSLLVEAQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHVVGDKPVFSF 202
Query: 206 PVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTT 265
+ H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+T
Sbjct: 203 QPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTV 262
Query: 266 PEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPL 322
P+++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ LP+
Sbjct: 263 PDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHAVAFRDLPV 322
Query: 323 KYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLY 380
+ S C+R E G RGLYRVH F+K+EMF P EES EE + ++ ++
Sbjct: 323 RMVCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEESSQLLEEFLSLQMEIL 381
Query: 381 SSLGLHFKLL 390
+ LGLHF++L
Sbjct: 382 TELGLHFRVL 391
>gi|262200213|ref|YP_003271421.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247]
gi|262083560|gb|ACY19528.1| seryl-tRNA synthetase [Gordonia bronchialis DSM 43247]
Length = 419
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 182/318 (57%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N + V A+ R R + L + +LE E D LR E+ A+ ++ G
Sbjct: 2 IDLRILRENPDLVRASQRTRGEDPGLVDTLLEADGTRRAAIVEADALRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E + + + I N+ P GGED ++
Sbjct: 61 KAHGDEKTALLAKGKELAEQVKAAVARQNAADEAAATAHRAISNIVADGAPAGGEDDYVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG+AL + D + A+VSGS+FY+L + +L++GL+N
Sbjct: 121 LEHVGEPREIADP-KDHLELGEALGLIDMERGAKVSGSRFYFLTGQGALLQLGLLNMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ + GFT + P +VR V+E GF A+ +VY ++ D L+GT+E+P+ G HM+
Sbjct: 180 KAVANGFTLMIPPVLVRPEVMEGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMN 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++D+ H+ L
Sbjct: 239 EIVDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPEDADAEHQRL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 299 LGWEKEMLAAIDVPYRVI 316
>gi|225579074|ref|NP_001139373.1| serine--tRNA ligase, mitochondrial isoform a precursor [Homo
sapiens]
gi|194373651|dbj|BAG56921.1| unnamed protein product [Homo sapiens]
Length = 520
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 176/312 (56%), Gaps = 21/312 (6%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE----RQKLIEEGKNLKE 152
+A+L ++ ++++ +Q+++ L EE+ AV ++ L + +Q ++ G
Sbjct: 83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQVRLDPGAGSIF 142
Query: 153 G---------LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF 203
G L L E +L ++ +A +PN THPDVPVG E + + VG+ VF
Sbjct: 143 GPTFLPFPGQLSLLVE--AQLEEQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVF 200
Query: 204 NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPL 263
+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+T +++++RGFTP+
Sbjct: 201 SFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPM 260
Query: 264 TTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLL 320
T P+++R +V E CG P +Q+Y+I+ A D L GTAE+ + G MD ++ L
Sbjct: 261 TVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDL 320
Query: 321 PLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEED 378
P++ S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ +
Sbjct: 321 PVRMVCSSTCYRAETN-TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQME 379
Query: 379 LYSSLGLHFKLL 390
+ + LGLHF++L
Sbjct: 380 ILTELGLHFRVL 391
>gi|315605628|ref|ZP_07880661.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312583|gb|EFU60667.1| serine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 424
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +R+N E A+ R R +N +L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRENPEPARASQRARGANPDLVDEIIAADAKRREALQAFENLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E E + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILAKAKELAEQVKEAEGRAGAADAEADRLARLLPNLIVDGV 110
Query: 184 PVGGE-DCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGE D ++R P F F KDH +G+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEEDFVVLRHEGPTPRDFAAEGFEAKDHLAIGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ L+ + + + GF P+ TP +V V+ GF ++ ++Y + D L
Sbjct: 171 GARLELALMTMAMDQALANGFVPMMTPTLVTPQVMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSGGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE++ H+ + EE++ + + L ++++
Sbjct: 290 CRPEDAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|451854844|gb|EMD68136.1| hypothetical protein COCSADRAFT_33102 [Cochliobolus sativus ND90Pr]
Length = 502
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 185/355 (52%), Gaps = 36/355 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLE---LVLELYEKMLNVQKEVDRLREERNAVA 128
K ID K IR N N +RN A+ + ++EL+++ L +Q+ LRE N +
Sbjct: 38 KPTIDIKHIRQNPGLYEQNCIDRNYGAHSKSPWRIIELHDQWLALQQSSRNLRERNNQLR 97
Query: 129 NKM--------KGKLEPSERQK-LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
K+ G + + QK I + K LKE L ++E ++ DE++ AQ +PN++
Sbjct: 98 AKLARAAVQAKNGDGQSAALQKGTIADAKALKEELSSIEAQETQIQDEIEALAQDLPNLS 157
Query: 180 HPDVPVGG--EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
PVG E I + + + K H +G+ L I DF +++ SG +Y+L
Sbjct: 158 STHTPVGADFEVVGYINAQSESEPLQSQSRKSHVDIGQELGILDFTGSSQTSGWGWYFLV 217
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGAD 295
+ MLE L+ + LS +G+ + P IV S + CGFQPR N Q+Y+IE ++
Sbjct: 218 GDGAMLEQALVQYALSVARNKGWKAVAPPSIVYSHIAAACGFQPRDQNGEQQIYAIEQSE 277
Query: 296 Q-------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRV 348
+ L GTAEIP+ G++ + ++ LPLK S C+R EAGA G T+GLYRV
Sbjct: 278 KDKAKPQLALAGTAEIPLAGMYANHKFEQAELPLKTVGVSRCYRAEAGARGANTKGLYRV 337
Query: 349 HQFSKLEMFVFCQPEE-------------SDSYHEELIRIEEDLYSSLGLHFKLL 390
H+F+K+EMF + P+ S++ +E++ I++++ +LGL ++L
Sbjct: 338 HEFTKVEMFAWTLPDHAGEDYFAAQPASSSEAVFDEMLTIQKEILEALGLQCRIL 392
>gi|325961721|ref|YP_004239627.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323467808|gb|ADX71493.1| seryl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 427
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 177/318 (55%), Gaps = 4/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ ++ + ++ + LR E+NA K+
Sbjct: 3 IDVKDLSENPDKYRASQRARRADESVVDAIISADSARRAALIRFENLRAEQNAFGKKV-A 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E++ L+ E K L + + + ++ + IPN+ VP GGED ++
Sbjct: 62 QAKGDEKKALLAEVKELANSVKAASAEADAAQTKQEELLRTIPNLIEDGVPEGGEDDYVV 121
Query: 194 RKTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KTVG P F +F KDH ++G+ + D + A+VSG++FY+L+ LEM L+ +
Sbjct: 122 VKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAM 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ I+ GF P+ TP +VR ++ GF + + ++Y + D L+GT+E+ + G H D
Sbjct: 182 DQAIEAGFIPMITPTLVRPETMQGTGFDVK-HDAEIYRLAEDDLYLVGTSEVALAGYHAD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P++YA S C+R EAG+ G TRG+ RVHQF+K+EMF++ EE+ + H+ L
Sbjct: 241 EILDFSAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHQRL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 301 LAWEEEMLAKCELPYRVI 318
>gi|147921639|ref|YP_684544.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
gi|121677008|sp|Q0W8S5.1|SYS_UNCMA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|110619940|emb|CAJ35218.1| seryl-tRNA synthetase [Methanocella arvoryzae MRE50]
Length = 425
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 179/325 (55%), Gaps = 14/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEK---MLNVQKEVDRLREERNAVANKM 131
+D +++R++ + V A++R RN L V +L K +Q +VD LR RN ++ ++
Sbjct: 2 LDIRFVRESPDVVRADLRKRNDLEKLAWVDDLLAKDSQARAMQVKVDELRRRRNEISREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + + L+ E +++ + E ++ + +++ +PN+ VPVG +D
Sbjct: 62 NEARKAGKDTSALMAEARDIPRQIKEAETEMEESRNKVHYYLMRLPNILDDSVPVGKDDT 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K G P +F +K+H L DF+ AA+V+G+ FY+LK V+L+M L
Sbjct: 122 ENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLDMALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVR----SSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+ + ++KRGFTP+T P ++ V + F+ +Y IEG D LI T+E P
Sbjct: 182 FAMDLLVKRGFTPVTPPYMMNRKSYEGVTDLADFE-----KVMYKIEGDDMYLIATSEHP 236
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+G ++ I E LPL+ A S CFR E GA G T+GL+RVHQF K+E FVFC+PE+S
Sbjct: 237 IGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQFVFCKPEDS 296
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
HEE++ E ++ LGL + ++
Sbjct: 297 WKIHEEILANAEAVFQQLGLPYHVV 321
>gi|405979262|ref|ZP_11037606.1| seryl-tRNA synthetase [Actinomyces turicensis ACS-279-V-Col4]
gi|404392643|gb|EJZ87701.1| seryl-tRNA synthetase [Actinomyces turicensis ACS-279-V-Col4]
Length = 424
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R + L + +LE ++ + LR + V +K G
Sbjct: 2 IDVRALRENPEPARASQRARGGDVELVDRILEADALRRTSLQDFESLRSTQKEV-SKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCSI 192
K ER ++ K L E + LE + + + A+ +PN+ VPVGGE D +
Sbjct: 61 KASKEERPAILARAKELAEQVKALEAKANEADADADRLARLLPNLVLDGVPVGGEEDFVV 120
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R P F F DH +G+ LD D A+VSG++FYYLK LE+ ++
Sbjct: 121 LRHEGPKPRDFAAEGFEPADHLAIGEGLDAIDTKRGAKVSGARFYYLKGIGARLELAMMT 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + +K GF P+ TP +V +V+ GF ++ ++Y + D L GT+E+ + G
Sbjct: 181 MALDQAVKAGFVPMMTPTLVTPAVMGGTGFLNEHSD-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +C+PE+++ H
Sbjct: 240 HADEILDLSDGPKRYLGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRPEQAEEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ + EE++ + L ++++
Sbjct: 300 QRFLAWEEEMLRKVELPYRVI 320
>gi|258650495|ref|YP_003199651.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233]
gi|258553720|gb|ACV76662.1| seryl-tRNA synthetase [Nakamurella multipartita DSM 44233]
Length = 420
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ + V A+ R ++ ++ +L D LR E+ + + G
Sbjct: 2 IDLRIVRDDPDRVRASQHARGEDSGAVDRLLAADADRRAAVARADSLRAEQKSYGRTI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ER L+E GK + + E + L + I N+ P GGE ++
Sbjct: 61 QASKDERPALLERGKAMAAEVKLAEAAEQEANAALAVAHRSIANIIE-GAPPGGEQDYLV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K VG P+ F+F +DH +LG+ L D + +VSG++FY+L+ L+ L+N +S
Sbjct: 120 VKEVGRPTEFDFTPRDHVELGERLGAIDIERGTKVSGARFYFLRGVGAQLQWALLNLAVS 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
I F P+ P +V+ +E GF A+ ++Y +E D L+GTAE+P+ G H
Sbjct: 180 TAIGHDFVPMIPPVLVKPEAMEGTGFLGAHAD-EIYRLEADDMYLVGTAEVPLAGYHAGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+EMFVFC+PE++ H +L+
Sbjct: 239 ILDLSAGPLRYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVFCKPEDAADQHAQLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
EE + + + L ++++
Sbjct: 299 SFEEQMLAQMELPYRVI 315
>gi|124485533|ref|YP_001030149.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
gi|166222742|sp|A2SRC6.1|SYS_METLZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|124363074|gb|ABN06882.1| seryl-tRNA synthetase [Methanocorpusculum labreanum Z]
Length = 425
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 179/323 (55%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL---ELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R + E V A++ R L + VLE + + + + LR RN +A ++
Sbjct: 2 LDIKFVRAHPEVVLADLEKRQDAEKLLWVDTVLEQDKLFRELTVKNNELRARRNQIAKEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLV-KLTDELQQEAQCIPNMTHPDVPVGGED 189
K E + L E K L GL+ +D++ K T++++ +PN+ H VP G +D
Sbjct: 62 NAYKKEGKDPAPLFAEAKALP-GLIKDNDDIMEKATEQVRYYLMRLPNILHESVPYGKDD 120
Query: 190 C-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+++ K VG P +F +K+H +L A DF+ A + SG+ FY+LK +L+M L
Sbjct: 121 TENVVVKKVGTPRSLDFELKNHGELAAANGWADFERATKTSGAGFYFLKGNLALLDMALQ 180
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVG 307
+ L +I +G+TP+ P ++ E+ G +V Y IE D LI TAE P+
Sbjct: 181 RFALDTIIAKGYTPIIPPYMMNRKSYEEV--TDLGDFEKVMYKIEDDDAYLIATAEHPMA 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
++ D I E LPLK S CFR E GA G +RGL+RVHQF+K+E F++C PE+S
Sbjct: 239 AMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPEKSWE 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
HEEL+ E++++ LGL ++++
Sbjct: 299 MHEELLANAEEIFTKLGLPYRVV 321
>gi|358446177|ref|ZP_09156726.1| serine--tRNA ligase [Corynebacterium casei UCMA 3821]
gi|356607859|emb|CCE55045.1| serine--tRNA ligase [Corynebacterium casei UCMA 3821]
Length = 419
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 174/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R + L + +LE + D LR E+ A K+ G
Sbjct: 2 IDLKFLRENPDVVRTSQVTRGEDPQLVDQLLEADTARRSAILAADELRAEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK+ + EE +++ + N+ P GGED I+
Sbjct: 61 QAAPEDRPALLEGSNELKDKVKQAEEAQRTAEEQVSTLQYKLSNVVE-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F KDH +LG++L + D A++ G++FYYL + L++ ++
Sbjct: 120 LEHYGEKPEFDFEPKDHLELGESLGLIDTKRGAKIGGARFYYLTGDGAFLQLSMMVLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF+ + P +VR ++ GF A+ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARAAGFSLMVPPVLVRPEIMAGTGFLGDHAD-EIYYLERDDLYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P++YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE+++ H +L+
Sbjct: 239 IIDLSKGPIQYAGWSSCFRREAGSHGKDTRGILRVHQFDKVEMFTYCKPEDAEKQHLQLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E ++ ++ LH++++
Sbjct: 299 SMEREMLDAMNLHYRVI 315
>gi|340515830|gb|EGR46082.1| predicted protein [Trichoderma reesei QM6a]
Length = 509
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 191/381 (50%), Gaps = 35/381 (9%)
Query: 39 PPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRN--- 95
P +RL AR + A D + A KP ID K IR N+ RN
Sbjct: 11 PQWRLQARNLTRHARAFSDV--KRPSSAPKP----IIDIKHIRQNQALYEQTCVERNYKR 64
Query: 96 SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE-----------RQKLI 144
A+ +++L+ + +QK+ LRE N + ++ S+ R+++
Sbjct: 65 QAAHPARIVQLHAEWQQLQKDARALRERSNLLRKELANSATSSDDEDLKDVKTMSRERVQ 124
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED--CSIIRKTVGNPSV 202
EE + LK L LE+ +++ A IPN+T D P G E S I +
Sbjct: 125 EEARALKGELAVLEKKEADAVAQMEALALEIPNLTSDDTPRGTEPEVLSYINEAPRFEQG 184
Query: 203 FNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTP 262
+ + H +G L I DF AA SG +YYL EA LE LI + L+ V K G+T
Sbjct: 185 SDQLWRSHVHIGAELGILDFAGAATASGWGWYYLLGEAAQLEQALIQYALAVVTKHGWTQ 244
Query: 263 LTTPEIVRSSVVEKCGFQPRGAN--TQVYSIE----GADQ-----CLIGTAEIPVGGIHM 311
++ P IV S + CGFQPR N QVY++ AD+ CL GT+EIP+ G+
Sbjct: 245 VSPPSIVYSHIGAACGFQPRDQNGEQQVYTVAQSQADADRGVPELCLAGTSEIPLAGMKA 304
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH-- 369
+ L LP+K A S C+R EAGA G T+GLYRVH+FSK+EMF + P+E ++
Sbjct: 305 MATLDAVDLPMKRVAVSRCYRAEAGARGVETKGLYRVHEFSKVEMFAWTAPDEFEARDVF 364
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+E++ ++ ++ SSLGL+ ++L
Sbjct: 365 DEMLDMQTEILSSLGLYCRVL 385
>gi|421874122|ref|ZP_16305729.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|372456777|emb|CCF15278.1| seryl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 427
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 180/320 (56%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K +R + E V + +RN + + L+ E+ EK + +E D L+ +RN V+ ++
Sbjct: 2 LDVKILRQDLEEVRRRLAHRNEDISALDQFAEVDEKRRQLIQEGDTLKNKRNTVSEQVAV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
K LI E K + E + L+E+L +L ++L +PN+ H P+G ED +
Sbjct: 62 LKRNKENADHLISEMKQVNERIKALDEELRELDEQLTVILLSLPNLPHESTPIGTTEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ + G S F+F K H+++ AL I DF+ A++V+GS+F + K LE LIN+
Sbjct: 122 VVHRVWGEASTFSFEPKPHWEVADALGILDFETASKVTGSRFVFYKGMGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+ + P +V + + G P+ + I+G D LI T+E+PV +H
Sbjct: 182 MDLHADKHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFKIDGVDYFLIPTSEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL + LP+KY AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILDVAQLPIKYNAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ E + LGL ++++
Sbjct: 301 KLVNNAETVLQMLGLPYRVM 320
>gi|399526377|ref|ZP_10766157.1| serine--tRNA ligase [Actinomyces sp. ICM39]
gi|398363092|gb|EJN46741.1| serine--tRNA ligase [Actinomyces sp. ICM39]
Length = 425
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +RDN E A+ R R +N L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRDNPEPARASQRARGANPGLVDEIIAADAARREALQAFETLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E E + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILAQAKELAEQVKAAEAAANAADAEADRLARLLPNLVVDGV 110
Query: 184 PVGGEDCSIIRKTVG-NPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGED ++ + G P F F +DH LG+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEDDFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ L+ + + + GF P+ TP +V V+ GF ++ ++Y + D L
Sbjct: 171 GARLELALMTMAMDQALANGFVPMMTPTLVTPQVMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSAGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE++ H+ + EE++ + + L ++++
Sbjct: 290 CRPEDAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|315230878|ref|YP_004071314.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183906|gb|ADT84091.1| seryl-tRNA synthetase [Thermococcus barophilus MP]
Length = 455
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 188/341 (55%), Gaps = 26/341 (7%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N + V ++ R L+ + LEL +K +++++LR ERN +A ++
Sbjct: 2 LDIKLIRENPDIVKGDLIKRGELEKLKWIDEILELDKKWRENLRKINQLRRERNRIAVEI 61
Query: 132 KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + E L+ + K + + + LE++ ++ ++ +PN+TH VP+G +D
Sbjct: 62 GKRKKAGESVDDLLTKSKEIVKQIEILEKENEEIRKKIDFYLWRLPNITHESVPIGKDDT 121
Query: 191 -------------------SIIRKTVGNPS--VFNFPVKDHFQLGKALDIFDFDAAAEVS 229
S + ++ G V + K H L + L DF+ AA+VS
Sbjct: 122 ENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVLEWKPKLHVDLLEILRGADFERAAKVS 181
Query: 230 GSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY 289
GS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR V E N +Y
Sbjct: 182 GSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRYVEEGVTTFDDFENV-IY 240
Query: 290 SIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVH 349
+EG D LI TAE P+ G+H + I+ LPL Y S CFR EAG AG T+G++RVH
Sbjct: 241 KVEGEDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVH 300
Query: 350 QFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
QF K+E FV+ +PEES +HE+L++ E+L+ L + ++++
Sbjct: 301 QFHKVEQFVYSRPEESWEWHEKLLQNAEELFQELEIPYRVV 341
>gi|407922581|gb|EKG15678.1| hypothetical protein MPH_07113 [Macrophomina phaseolina MS6]
Length = 514
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 196/398 (49%), Gaps = 45/398 (11%)
Query: 38 KPPFR-------LLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSAN 90
+PPF LLA SA ++ + + V K +D K IR N N
Sbjct: 2 RPPFACASCRSVLLASHISAARQSSLHSLPRRHYVRPSTAPKPQLDLKHIRQNPGLYEQN 61
Query: 91 IRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVANKMK------GKLEPS--- 138
+RN A + +++L+++ Q + +LRE N + K+ G +P
Sbjct: 62 CIDRNYRAQSKHSWEIIDLFDQWKQCQLDARQLRERGNLLRRKLSNAASRSGDTDPDPDM 121
Query: 139 ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED---CSIIRK 195
++ LI EGK +KE L +EE +L + + A +PN++ + PVG + I +
Sbjct: 122 DKDALIAEGKEIKEKLTGIEEKEKQLVERMDSLALELPNLSSVNTPVGDQPEVIGYINKH 181
Query: 196 TVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEV 255
G+ + K H +G L + DF AA SG +YYL NE +LE L+ + L+
Sbjct: 182 PDGSGDATDRLWKSHVVIGSELGLLDFTGAATTSGWGWYYLLNEGALLEQALVQYALTVA 241
Query: 256 IKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGADQ-------CLIGTAEIPV 306
+RG+ P++ P IV S + CGFQPR N Q+Y++E A++ L GTAEIP+
Sbjct: 242 RQRGWKPVSPPSIVYSHIAAACGFQPRDQNGEQQIYALEQAEKDKSKPSLVLAGTAEIPL 301
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE--- 363
G+ + ++ LPLK + +R EAG G T+GLYRVH+F+K+EMF + P+
Sbjct: 302 AGLMAAQTIEDADLPLKMVGVNRSYRAEAGGRGVDTKGLYRVHEFTKVEMFSWTLPDSHE 361
Query: 364 -----------ESDSYHEELIRIEEDLYSSLGLHFKLL 390
++ +E++ I+ ++ SLGLH ++L
Sbjct: 362 GEGFFTDRGVAHPEAVFDEMLSIQTEILGSLGLHCRIL 399
>gi|398817866|ref|ZP_10576470.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398029145|gb|EJL22632.1| seryl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 426
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 182/322 (56%), Gaps = 9/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
+D K +R + E V + +RN + + L+ +E+ EK V +E + L+ +RN V+ +
Sbjct: 2 LDVKVLRQDLEEVKRRLAHRNEDISALDQFVEVDEKRREVIQEAEALKNKRNTVSEQVAV 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-ED 189
MK E ++ LI E K + E + L+E+L +L ++L+ +PN+ H P+G ED
Sbjct: 62 MKRNKENADH--LIAEMKEVNERIKALDEELRQLDEQLEFILLSLPNLPHESTPIGTTED 119
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++I T G P F+F +K H++L I DF+ A +V+GS+F + K LE L+N
Sbjct: 120 DNVIAWTWGEPRAFDFEIKPHWELASQAGILDFETAGKVTGSRFVFYKGLGARLERALMN 179
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + + G+ + P IV + + G P+ + IEG D LI TAE+PV
Sbjct: 180 FMMDLHSNEHGYEEVIPPYIVNRTSMTGTGQLPK-FEEDAFKIEGPDYFLIPTAEVPVTN 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D I+ + LP Y AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PEES
Sbjct: 239 MHRDEIMDGADLPRYYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYDE 298
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
++L++ E + LGL +++L
Sbjct: 299 LDKLVKNAEKVLQLLGLPYRVL 320
>gi|308175877|ref|YP_003915283.1| serine--tRNA ligase [Arthrobacter arilaitensis Re117]
gi|307743340|emb|CBT74312.1| serine--tRNA ligase [Arthrobacter arilaitensis Re117]
Length = 425
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 175/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N + A+ R R ++ +L + +L +RLR E+NA + K+ G
Sbjct: 2 IDLKMLTENPDMYRASQRARGADESLIDQLLAADTARRETIATYERLRAEQNAFSKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + ER L+ E K L + + + + + + IPN+ +P GGED +
Sbjct: 61 KAKGDERAALLAEVKELAASVKSAQAESDAAAAKCTALQRSIPNLIIDGIPAGGEDDFTV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG F F DH QL + LD D + A+VSGS+FY+LK LE+ ++N
Sbjct: 121 VKHVGTVRDFKAEGFEPLDHLQLAEKLDAIDMERGAKVSGSRFYFLKGIGARLEIAMMNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ F P+ TP +VR ++ GF + ++Y +E + L+GT+E+ + G H
Sbjct: 181 ALDVAMEHEFIPMITPTLVRPETMQGTGFDVE-HDDEIYKLERDNMYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ + ++YA +S C+R EAG+AG TRG+ RVHQF+KLEMFV+ E +++ H
Sbjct: 240 ADEIMDLAEGSIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFVYTSVENAEAEHA 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +EED+ + L ++++
Sbjct: 300 KLLAMEEDMLGRMELPYRVI 319
>gi|373469529|ref|ZP_09560711.1| serine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371764223|gb|EHO52644.1| serine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 414
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 182/325 (56%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ + L LV +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDVVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRSKRNKISKEI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E+ K +L E L LE +L ++++++ IPN+ P VP+G
Sbjct: 62 GTLMAQGKKEEAEQVKA--SVASLGEQLAKLEPVEAELEEKIKKDMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V +F + H ++ + L+ D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIEKFGEPFVPDFEIPYHTEIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 239 MIGKFIDTMNDEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEES 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ S+ + + L
Sbjct: 299 KMWYDKLWQNTVDLFRSMDIPVRTL 323
>gi|228008415|ref|NP_076126.2| serine--tRNA ligase, mitochondrial precursor [Mus musculus]
gi|341942089|sp|Q9JJL8.2|SYSM_MOUSE RecName: Full=Serine--tRNA ligase, mitochondrial; AltName:
Full=SerRSmt; AltName: Full=Seryl-tRNA synthetase;
Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
synthetase; Flags: Precursor
gi|12845978|dbj|BAB26981.1| unnamed protein product [Mus musculus]
gi|26352626|dbj|BAC39943.1| unnamed protein product [Mus musculus]
gi|51260917|gb|AAH79664.1| Seryl-aminoacyl-tRNA synthetase 2 [Mus musculus]
gi|74183708|dbj|BAE24469.1| unnamed protein product [Mus musculus]
gi|148692173|gb|EDL24120.1| seryl-aminoacyl-tRNA synthetase 2 [Mus musculus]
Length = 518
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 175/307 (57%), Gaps = 15/307 (4%)
Query: 98 ANLELVLELYEKMLNVQKEVDRLREE--------RNAVANKMKGKLEPS-ERQKLIEEGK 148
A+L ++ ++++ +++++ L E R +AN+ +++ + Q L G+
Sbjct: 84 ADLPAIISTWQELRQLREQIRSLEAEKEAVAEAVRALLANQDSDQVQKDPQYQGLRARGR 143
Query: 149 NLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVK 208
+++ L L +L ++L Q+A +PN THPD PVG E + + + VG F+F +
Sbjct: 144 EIRKQLTPLYPQETQLEEQLYQQALRLPNQTHPDTPVGDESQARVVRVVGEKPAFSFQPR 203
Query: 209 DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEI 268
H ++G+ LDI + VSG + YYL+ +L+ GL+N+TLS+++ RGFTP+T P++
Sbjct: 204 GHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLSKLVSRGFTPMTVPDL 263
Query: 269 VRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYA 325
+R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 264 LRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMV 323
Query: 326 AFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSL 383
S C+R E G GLYRVH F+K+EMF P E+S +E + ++ ++ + L
Sbjct: 324 CASTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLDEFLSLQVEILTEL 382
Query: 384 GLHFKLL 390
GLHF++L
Sbjct: 383 GLHFRVL 389
>gi|399046000|ref|ZP_10738537.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433545751|ref|ZP_20502098.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398055785|gb|EJL47835.1| seryl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432182954|gb|ELK40508.1| seryl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 426
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 181/322 (56%), Gaps = 9/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
+D K +R + E V + +RN + + L+ E+ EK V +E + L+ +RN V+ +
Sbjct: 2 LDVKVLRQDLEEVKRRLAHRNEDISALDQFAEVDEKRRQVIQEAEALKNKRNTVSEQVAV 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
MK E ++ LI E K + E + L+E+L KL ++L+ +PN+ H P+G ED
Sbjct: 62 MKRNKENADH--LIAEMKEVNERIKKLDEELRKLDEQLEFILLSLPNLPHESTPIGTSED 119
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+++ T G P F F K H++L I DF+ AA+V+GS+F + K LE L+N
Sbjct: 120 DNVVAWTWGEPRSFGFETKPHWELASQAGILDFETAAKVTGSRFVFYKGLGARLERALMN 179
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + + G+ + P IV + + G P+ + +EG D LI TAE+PV
Sbjct: 180 FMMDLHATEHGYEEVIPPYIVNRASMTGTGQLPK-FEEDAFKLEGPDYFLIPTAEVPVTN 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D I+ + LP YAAFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 239 MHRDEIMDGADLPRYYAAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDE 298
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
++L++ E + LGL ++++
Sbjct: 299 LDKLVKNAEKVLQLLGLPYRVM 320
>gi|302418949|ref|XP_003007305.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261352956|gb|EEY15384.1| seryl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 500
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 185/349 (53%), Gaps = 30/349 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLE---LVLELYEKMLNVQKEVDRLREERNAV- 127
K +D K IR+N + N RNRN A+ E + ++++ + Q+ LRE N V
Sbjct: 40 KPTLDIKHIRENANLHAENCRNRNYGAHSENPARIAAIFKQWQDHQRSSRSLRERSNQVR 99
Query: 128 ----------ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
A + + +L+EE + LK+ L +E+ +L +E++ A +PN
Sbjct: 100 RCIANPTVRDAEGTANDISSLTKDQLLEEARRLKKELSGVEKLEARLVEEMETLASTVPN 159
Query: 178 MTHPDVPVGGEDC---SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
++ P+ PVG E I + + S + + H +G L I DF +A+ SG FY
Sbjct: 160 LSSPESPVGEEPTLLSQINEQHLEKASSSDRVWRSHVHIGAELGILDFASASSTSGWGFY 219
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI- 291
YL +EA LE L+ + L+ ++ G+ + P +V S + CG+QPR N Q+YSI
Sbjct: 220 YLLDEAAQLEQALVQYALAVAVRHGWRQVAPPSMVYSHIANACGYQPRDQNDEQQIYSIA 279
Query: 292 --------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
+ + L GT+EIP+ G+ +S +SES LP K A S C+R EAGA G +T+
Sbjct: 280 RPAEDVERDKPELVLAGTSEIPLAGMKANSTVSESDLPAKRVAVSRCYRAEAGARGASTK 339
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+E+F + P D+ +E++ ++ +L SLGL ++L
Sbjct: 340 GLYRVHEFTKVELFAWTPPNFDDTTEIFDEMLDMQTELLESLGLSCRVL 388
>gi|312134746|ref|YP_004002084.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311774797|gb|ADQ04284.1| seryl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 420
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 181/321 (56%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL E+ + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRANPEKVQEGLTKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + +L+ E K L + + L+ + ++ DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTELMNELKELSDKIKELDSVVKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ V +F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGDVRVPDFELKPHWEIGINLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|225418653|ref|ZP_03761842.1| hypothetical protein CLOSTASPAR_05877 [Clostridium asparagiforme
DSM 15981]
gi|225041824|gb|EEG52070.1| hypothetical protein CLOSTASPAR_05877 [Clostridium asparagiforme
DSM 15981]
Length = 426
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 180/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+N+ + L LV +EL K QKE D LR RN ++ ++
Sbjct: 2 LDLKFVRENPDIVKQNIKNKFQDGKLPLVDEVIELDAKSRATQKEADDLRASRNKLSKQI 61
Query: 132 -----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK E +E +Q++ L E L LE +L ++++ + IPN+ P VP
Sbjct: 62 GQLMGQGKKEEAEAVKQQVSANSDRLSE-LQALESEL---SEKITKIMMTIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F + H ++ + + D DAA +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEVERFGEPVVPDFEIPYHTEIMERFNGIDLDAARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+I ES LPL ++S CFR E GA G RG+YR+HQF K EM V C PE
Sbjct: 237 HSMIGKFIDTITPESKLPLTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCTPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES ++E+L + DL+ SL + + L
Sbjct: 297 ESPMWYEKLWKNTVDLFRSLDIPVRTL 323
>gi|400976222|ref|ZP_10803453.1| seryl-tRNA ligase [Salinibacterium sp. PAMC 21357]
Length = 421
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 169/318 (53%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RDN +AV + R S+ L + + + E + LR E+N+ K+
Sbjct: 2 IDPQILRDNPDAVRQSQIARGSSVQLVDDAIAADQNRRASIGEFESLRAEQNSFGKKVAQ 61
Query: 134 KLEPSERQK-LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
PSE +K L+ E + L + + + E + I N+ VPVGGED
Sbjct: 62 A--PSEEKKALVAEAQKLSARVKAAQLVSAEAEAEFTRIVGAIGNIAVEGVPVGGEDDWE 119
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + VG P F+F +DH LG+ L D +VSGS+FY+LK LE+GL+N L
Sbjct: 120 LVREVGTPKKFDFEPRDHADLGEILGAIDIPRGVKVSGSRFYFLKGVGARLEIGLMNMAL 179
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
I F PL TP +VR ++ GF ++ ++Y + D L GT+E+ + G H D
Sbjct: 180 DRAIAGDFIPLITPTLVRPEMMAGTGFLGEHSD-EIYYLPADDLYLTGTSEVALAGYHSD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S C+R EAG+AG RG+ RVHQF+KLEMF + PE + + HE L
Sbjct: 239 EILDLSKGPLRYAGWSTCYRREAGSAGKDNRGILRVHQFNKLEMFSYVLPENAQAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +E + + L ++++
Sbjct: 299 LSFQESMLQACELSYRVI 316
>gi|373106191|ref|ZP_09520494.1| serine-tRNA ligase [Stomatobaculum longum]
gi|371652566|gb|EHO17974.1| serine-tRNA ligase [Stomatobaculum longum]
Length = 427
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANK- 130
ID +++R+N EAV NIR + L LV E L E+ Q E D+LR +RN ++
Sbjct: 2 IDIRFLRENPEAVKENIRKKFQEQKLPLVDEVIALDEESRKTQAEADQLRSDRNKISKSI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E +K EE + E L LE ++T +++ IP + P VP+G +
Sbjct: 62 GALMGQGKKDEAEKAKEEVAKINERLAALEPREAEITARIREIMLTIPQIMDPSVPIGKD 121
Query: 189 D-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D C++ + G P V +F + H + + L D +AA +V+G+ FYYL + L +
Sbjct: 122 DSCNVEIQRYGEPVVPDFEIPYHTDIMERLHGIDLEAAGKVAGNGFYYLLGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT + P ++ S VV P + +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYVIPPYMIHSDVVTGVMSFPE-MDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +DS+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GRFIDSVNDEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVICKPEESMD 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++ +L + D + SL + + L
Sbjct: 301 WYNKLWQNTVDFFRSLDIPVRTL 323
>gi|388254915|gb|AFK25028.1| seryl-tRNA synthetase [uncultured archaeon]
Length = 420
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 180/321 (56%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K I++ + + +++R +L+ ++EL K + + D LR +RN V+ ++ K
Sbjct: 2 LDPKLIKEKPDLIRKMLQDRRIKYDLDGLVELDAKRRELIIKTDELRRKRNQVSVEISAK 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ + I + + + L LE + +K+ + + IPN+ H VP+G ++ +
Sbjct: 62 KKSGQDASDSISQMQAVSAELTALEAEQLKVEAQYNKLVLSIPNLIHESVPIGPDESANK 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G F+F VKDH + ++LD+ D + AA+ +G++FYYLKN+ V L LI +
Sbjct: 122 EIRRW-GEVPKFDFKVKDHIDIAQSLDLVDLERAAKAAGARFYYLKNQLVRLNQALIGFA 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L + + +T + P ++ S +E + +Y ++G D LIGT+E + +H
Sbjct: 181 LDFLESKKYTLIQPPYLINKSSMEGAIIADDFTDV-IYKVDGEDLFLIGTSEHAIAAMHS 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL LPL+YA S CFR EAGA G +G++RVHQF K+E +VF +PE+S HE
Sbjct: 240 DEILQGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFEKVEQYVFARPEDSWKEHES 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
++ I E+ Y LG+ +++++
Sbjct: 300 MLAIVEEFYQHLGIPYRVMVL 320
>gi|190346699|gb|EDK38847.2| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC
6260]
Length = 462
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 20/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNR----NSNANLELVLELYEKMLNVQKEVDRLREERNAV 127
+ +D K I K+ +I R + NLE ++E + + K++D LR ER+ +
Sbjct: 35 RPVLDIKSIIARKDEYRDSINKRKLPQSYVQNLEDIVERRNHEVELAKQIDSLRHERSIM 94
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP--- 184
MK + P ++ LIE LK L LEE +L+ E+ +A+ +PN+ P +
Sbjct: 95 GEAMKKEKSPQIKESLIE----LKSQLKYLEEQHKELSSEILDKAEGLPNLIDPTIAESE 150
Query: 185 ---VGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAV 241
V +C + V F DH ++ + L I DF +AA+VSGS +YYL +
Sbjct: 151 AEIVQFINCESEKDAVSIKPATTF---DHREIAENLSIVDFQSAAKVSGSSWYYLIGDGA 207
Query: 242 MLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--QVYSIEGADQCLI 299
+LE L+ + L + + G+ +T P IV++ V CGF+P N Q+Y IEG + L
Sbjct: 208 LLEQALVQYGLKKARQYGYRMVTPPSIVKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLT 267
Query: 300 GTAEIPVGGIHMDSILSESL-LPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
GTAEIP+G IH + P+KY S +R EAGA G T+GLYRVH+F+K+E+F
Sbjct: 268 GTAEIPLGAIHSGTDFENGQKFPIKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFH 327
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
F PE + E+L +++ ++ LGL K++ A+
Sbjct: 328 FTTPEYAKQELEDLRQLQTEIIEELGLMSKMIKMPAD 364
>gi|453076147|ref|ZP_21978926.1| seryl-tRNA ligase [Rhodococcus triatomae BKS 15-14]
gi|452761455|gb|EME19757.1| seryl-tRNA ligase [Rhodococcus triatomae BKS 15-14]
Length = 419
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N + V + R R + L + +L E D LR E+ A+ K+ G
Sbjct: 2 IDLKFLRENPDVVRQSQRMRGEDPALVDALLAADESRRAAVLAGDNLRAEQKALGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+ K L + + E + L+ + I N+ P GGED I
Sbjct: 61 QASPEERPALLAGAKELAQQVKDAEAAQHEADAVLESAQRAISNIVQDGAPAGGEDDFIT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG P F+F KDH +LG++L + D + A+VSG++FY+L +L++GL+
Sbjct: 121 LETVGEPPTFDFEAKDHLELGESLGLLDMERGAKVSGARFYFLTGHGALLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR +++ GF + + +VY +E D L+GT+E+P+ G H
Sbjct: 181 KATANGFTMMIPPVLVRPEIMQGTGFLGQHSE-EVYHLEQDDLYLVGTSEVPLAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++D+ HE L+
Sbjct: 240 ILDLSTGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E ++ +++ + ++++
Sbjct: 300 GWEREMLAAIDVPYRVI 316
>gi|315652083|ref|ZP_07905084.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485730|gb|EFU76111.1| serine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 427
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 181/325 (55%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ + L LV +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDEVRQNIKNKFQDFKLPLVDEVIELDEKLRKTKVEADELRAKRNKISKEI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E+ K +L E L LE L ++++++ IPN+ P VP+G
Sbjct: 62 GTLMAQGKKEEAEQVKA--SVASLGEQLAKLEPIEADLEEKIKKDMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V +F + H ++ + L+ D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIEKFGEPFVPDFEIPYHTEIMEKLNGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 239 MIGKFIDTMNEEAKLPYTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEMIVVCKPEES 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 299 KMWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|406997676|gb|EKE15700.1| hypothetical protein ACD_11C00110G0008 [uncultured bacterium]
Length = 442
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 187/335 (55%), Gaps = 20/335 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I++N EA+ I N+N + +L LEL +K + + +E++ R +N++ + +K
Sbjct: 2 LDIKFIKENAEAIKKAIVNKNIDFDLAGFLELDKKRVEIIQELEEYRSMKNSINDLIKSA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GEDCSI 192
E++++IE+GK +K L E +L ++ + + IPN+ D P+G ED
Sbjct: 62 KNDEEKKEIIEKGKEIKLKLEEKEPELKEIQQKFDELMVKIPNVISLDTPIGKSDEDNVE 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I K G F+F +KDH QLGK LDI D + +V+G + YY+KNE V L M L+ + L
Sbjct: 122 IEKG-GEIPKFDFAIKDHIQLGKDLDILDLEKGTKVAGYRGYYVKNEGVSLMMALMMYAL 180
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGF----QPRGANTQVYSIEGAD-----------QC 297
+++I++GF P+ P +V+ + + G+ + +VY + D +
Sbjct: 181 NKMIEKGFMPMIPPTLVKGNALFGTGYFKGLEYDSEVDEVYQVASGDKEADGKSSKEKKF 240
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L+GTAE + + D IL E LP+K +S C+R+E G+ G T+GLYRVH+F K+E
Sbjct: 241 LVGTAEPSLLAYYSDEILKEQQLPVKVCGYSQCYRSEIGSYGKDTKGLYRVHEFMKVEQV 300
Query: 358 VFCQPEESDS--YHEELIRIEEDLYSSLGLHFKLL 390
V + E S H+E+ I ++++ LGL ++ L
Sbjct: 301 VLMEANEEASIKMHDEMFAISKEIHQELGLPYRAL 335
>gi|393796812|ref|ZP_10380176.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 420
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 177/320 (55%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K I+DN + + I+ RN + + ++++ +K + D LR+++N +A ++ K
Sbjct: 2 LDPKIIKDNHQMIREMIKARNVEYDFDELIDVDQKRREFIIKTDELRKKKNQIAMEISQK 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + ++E KN+ L LE +++ + A IPN+ H VP+G ++ +
Sbjct: 62 KKAGQDISSTLDEMKNISAELTKLETLQIEIEKKYSSLALSIPNLIHESVPLGKDETANK 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
K G F+F + DH + + LD+ D + AA+V+G++FYYLKN+ V L LI++ L
Sbjct: 122 EIKKWGKIPEFDFKINDHIDISEKLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYAL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ ++ + P ++ +E +Y IE D +IGT+E + +H D
Sbjct: 182 DFLAEKNYSLIQPPYMINRQSMEGAVI-ANDFEEVIYKIENEDLYMIGTSEHAMAAMHSD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ LPL+YA S CFR EAGA G +G++RVHQF K+E FVF +P+ES HE++
Sbjct: 241 EIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFTRPDESWDEHEKM 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
+ E+ Y L + +K+LL
Sbjct: 301 LSNAEEFYQKLEIPYKVLLL 320
>gi|313891838|ref|ZP_07825443.1| serine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119832|gb|EFR43019.1| serine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 434
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 176/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-G 133
+D K+IR+N + V N+ NRN+N +L VLEL K + +E ++L+ RN + +
Sbjct: 2 LDLKFIRENFDLVKENLINRNNNFDLNKVLELDRKRRELLQETEKLKSRRNIESKNIAIA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
K + + I E + + + ++ DL K+ EL IPN+ VPVG +D
Sbjct: 62 KKKGEDASAAIAEMRKVGNQISAIDIDLNKIEKELHNLLLHIPNIVDESVPVGKDDSENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+FP+K H++LG++L + DF+ A +VSG++F + + LE + N+
Sbjct: 122 EIRRW-GVPRKFDFPIKAHYELGESLKMLDFERAGKVSGARFTFYIDAIAKLERAVYNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ FT + P I+ S ++ G P+ A +Y +EG + TAE+P+
Sbjct: 181 LDLHTVEGTFTEVIPPYIINESSMQGTGQLPKFAE-DMYKVEGETMYMTPTAEVPLTNYF 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL ES+LP+ + A + CFR EAG+AG TRGL R HQF K+EM +C+PE+S E
Sbjct: 240 AGEILDESILPVHFTALTPCFRKEAGSAGKDTRGLIRQHQFQKVEMVKYCKPEDSKDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L E + L L ++++
Sbjct: 300 SLTNEAEKVLQELNLPYRVV 319
>gi|9188537|dbj|BAA99558.1| mitochondrial seryl-tRNA synthetase [Mus musculus]
Length = 518
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 175/307 (57%), Gaps = 15/307 (4%)
Query: 98 ANLELVLELYEKMLNVQKEVDRLREE--------RNAVANKMKGKLEPS-ERQKLIEEGK 148
A+L ++ ++++ +++++ L E R +AN+ +++ + Q L G+
Sbjct: 84 ADLPAIISTWQELRQLREQIRSLEAEKEAVAEAVRALLANQDSDQVQKDPQYQGLRARGR 143
Query: 149 NLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVK 208
+++ L L +L ++L Q+A +PN THPD PVG E + + + VG F+F +
Sbjct: 144 EIRKQLTPLYPQETQLEEQLYQQALRLPNQTHPDTPVGDESQARVVRVVGEKPAFSFQPR 203
Query: 209 DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEI 268
H ++G+ LDI + VSG + YYL+ +L+ GL+N+TLS+++ RGFTP+T P++
Sbjct: 204 GHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGAVLQHGLVNFTLSKLVSRGFTPMTVPDL 263
Query: 269 VRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYA 325
+R +V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 264 LRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPVRMV 323
Query: 326 AFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSL 383
S C+R E G GLYRVH F+K+EMF P E+S +E + ++ ++ + L
Sbjct: 324 CASTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSQLLDEFLSLQVEILTEL 382
Query: 384 GLHFKLL 390
GLHF++L
Sbjct: 383 GLHFRVL 389
>gi|365873648|ref|ZP_09413181.1| seryl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983735|gb|EHM09942.1| seryl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 429
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 175/320 (54%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D +W+RDN E + +R RNS+ L+ ++ E+ + EV+ L+ +RN + ++ +
Sbjct: 2 MDLRWVRDNLEEARSYLRARNSDFPLDQLISFDERRRQILAEVEDLKAKRNEGSRRVGEM 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + L+EE + + + + LE +L + EL +PN H VPVG E C+
Sbjct: 62 KRRGEEPKDLMEEMRAIGDRISVLESELSAVEQELNGLLLRMPNRPHESVPVGKDETCNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + G P F+F K H+++G+AL I +F+ A ++ S+F L+ LE LI + L
Sbjct: 122 VVRVWGEPRQFDFTPKPHWEVGEALGIMEFERAVRLAESRFVILRGLGARLERALIQYML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ G+T ++ P +V + + G P+ A +Y D LI TAE+P+ +H
Sbjct: 182 DLHCENGYTEVSPPFLVNTDTMTGTGQLPKFAE-DLYRCANDDLWLIPTAEVPLTNLHRG 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL E LPL Y A++ CFR EAG+ G +G+ RVHQFSK+E+ C+PE+S E+L
Sbjct: 241 EILEEEQLPLYYTAYTPCFRREAGSYGRDVKGMLRVHQFSKVELVKICKPEDSYDELEKL 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
E + LGL ++++
Sbjct: 301 TASAESVLKGLGLPYRVVCL 320
>gi|339626339|ref|YP_004717982.1| seryl-tRNA synthetase [Sulfobacillus acidophilus TPY]
gi|379005810|ref|YP_005255261.1| seryl-tRNA synthetase [Sulfobacillus acidophilus DSM 10332]
gi|339284128|gb|AEJ38239.1| seryl-tRNA synthetase [Sulfobacillus acidophilus TPY]
gi|361052072|gb|AEW03589.1| seryl-tRNA synthetase [Sulfobacillus acidophilus DSM 10332]
Length = 424
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 178/320 (55%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E V +R ++ + +L+ +K + EV++L+ ERN V+ ++ +
Sbjct: 2 LDLKRIRQEPETVRELLRKKHVEVDFTPLLDWDQKRRELLAEVEQLKAERNRVSEEVARR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + LIEE + + E + LE +L L + ++ +PN DVP G G D +
Sbjct: 62 KKSQQDATSLIEEMRGVGEHIQRLENELGPLEEAIRDFLLGVPNTPLMDVPDGDGADDNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
VG+P F+FPVK H+ LG++LDI DF+ ++SGS+F LK + L LIN+ L
Sbjct: 122 EVHRVGDPPHFHFPVKPHWDLGESLDILDFERGRKLSGSRFTVLKGDGARLSRALINFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
RG+ + P +V + G P+ A+ V+ + + LI TAE+P+ +H +
Sbjct: 182 DHNRARGYREIAPPYLVNRDALIGTGQLPKFAD-DVFRVVPHEYYLIPTAEVPLTNLHRN 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL+E LPLKY A++ FR EAGAAG TRG+ R HQF K+E+ +P++S++ E+
Sbjct: 241 EILNEKDLPLKYTAYTASFRAEAGAAGRDTRGIIRQHQFDKVELVRVVRPDDSEAALAEM 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
+R E L +L L ++ +L
Sbjct: 301 VRDAESLLEALELPYRTVLL 320
>gi|449304469|gb|EMD00476.1| hypothetical protein BAUCODRAFT_118242 [Baudoinia compniacensis
UAMH 10762]
Length = 509
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 184/361 (50%), Gaps = 47/361 (13%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNA---NLELVLELYEKMLNVQKEVDRLREERNAVA 128
K + K IR N N +RN N +LEL+EK++ +Q E R R+ N +
Sbjct: 40 KPTPNLKHIRQNPGLYEQNSVDRNYAPYAKNGWKILELHEKLVTLQHEAVRSRQTINGLE 99
Query: 129 NKMKGKL--------EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
+++ K S LI E K LK L + ++ + +E+ + A +PN++
Sbjct: 100 KQLQAKRAGGREDGSSTSTTDTLIAEAKALKSALESRIDEEQRWREEMDRLALELPNLSS 159
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPV----KDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
PVG + K +G+ + P + H +G+ LD+ DF+A+A SG +Y+L
Sbjct: 160 LQTPVGDQP-----KLLGHINGEALPTPNHNRSHVDIGRELDLLDFEASAVTSGWGWYFL 214
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG--ANTQVYSI-EG 293
KNEA +LE LI + LS +KRG+ T P +V S + CGF PR TQ+YSI +
Sbjct: 215 KNEAALLEQALIQYALSVALKRGWQIRTPPSLVYSHIASACGFMPRDQHGETQIYSITQD 274
Query: 294 ADQC-----LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRV 348
AD L GTAEIP G +++LSE LPLK S +R EAGA G T+GLYRV
Sbjct: 275 ADAAKSSLVLAGTAEIPFAGSQANNVLSEHDLPLKIIGPSRSYRAEAGARGVDTKGLYRV 334
Query: 349 HQFSKLEMFVFCQPEESDSYHE-------------------ELIRIEEDLYSSLGLHFKL 389
H+F+K+EMF + P S S + E+I I+ ++ +SLGLH ++
Sbjct: 335 HEFTKVEMFAWTAPPPSLSSSDDGGFGGEEDTQTQAEVIFNEMISIQIEILTSLGLHARV 394
Query: 390 L 390
L
Sbjct: 395 L 395
>gi|222528873|ref|YP_002572755.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254783001|sp|B9MQM8.1|SYS_ANATD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222455720|gb|ACM59982.1| seryl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 420
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 179/321 (55%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL E+ + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRANPEKVQEGLSKRNKDVSIAPILELDERRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + L+ E K+L + + L+ + ++ DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTDLMNELKDLSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G +F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|357589998|ref|ZP_09128664.1| seryl-tRNA synthetase [Corynebacterium nuruki S6-4]
Length = 425
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 183/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N E V + R R + L + +LE ++ + R E A + M
Sbjct: 2 IDLKFLRENPETVRESQRTRGEDPELVDRLLEADQRRRDAISAATTARTEAKAFSKSMGR 61
Query: 134 KLE---PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K++ P ER +L G+ L E+ + ++ I N+ P GGED
Sbjct: 62 KMKDASPEERDELKAHGQELAAATKVEEQKEQQAEQDVHDLQFQISNIV-TGAPAGGEDD 120
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + VG P+ F+F KDH +LG++L + D + A+VSG++FY+L + +L++ ++
Sbjct: 121 FVVLEHVGTPTEFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGDGALLQLAMLQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ I+ GF + P +VR ++ GF + A+ ++Y ++ D L+GT+E+ + G H
Sbjct: 181 AARKAIEHGFQLMIPPVLVRPEIMAGTGFLGQHAD-EIYHLDTDDLFLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ S P+KYA +S CFR EAG+ G TRG+ RVHQF K+EMFV+ +PEE++ H+
Sbjct: 240 ADEIIDLSDGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYARPEEAEDIHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L+ +E+D+ +++ + ++++
Sbjct: 300 QLLAMEKDMLAAVEVPYRVI 319
>gi|346979174|gb|EGY22626.1| seryl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 500
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 185/349 (53%), Gaps = 30/349 (8%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLE---LVLELYEKMLNVQKEVDRL----REER 124
K +D K IR+N + + N RNRN A+ E + ++++ + Q+ L + R
Sbjct: 40 KPTLDIKHIRENADLHAENCRNRNYGAHSENPARIAAIFKQWQDHQRSSRSLRERSNQVR 99
Query: 125 NAVANKMKGKLEPS-------ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+AN E + + +L+EE + LK+ L +E+ +L +E+Q A +PN
Sbjct: 100 RCIANPTVRDAEGTAEDICSLTKDQLLEEARRLKKELSGVEKLEARLVEEMQTLASTVPN 159
Query: 178 MTHPDVPVGGEDC---SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
++ + PVG E I + + S + + H +G L I DF +A SG FY
Sbjct: 160 LSSHESPVGEEPTLLSQINEQHLKKASSSDRVWRSHVHIGTELGILDFASAGSTSGWGFY 219
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI- 291
YL +EA LE L+ + L+ ++ G+ + P +V S + CG+QPR N Q+YSI
Sbjct: 220 YLLDEAAQLEQALVQYALAVAVRHGWRQVAPPSMVYSHIANACGYQPRDHNDEQQIYSIA 279
Query: 292 --------EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATR 343
+ + L GT+EIP+ G+ +S LSES LP K A S C+R EAGA G +T+
Sbjct: 280 RPAEDVERDKPELVLAGTSEIPLAGMKANSTLSESDLPAKRVAVSRCYRAEAGARGASTK 339
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYH--EELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+E+F + P D+ +E++ ++ +L SLGL ++L
Sbjct: 340 GLYRVHEFTKVELFAWTPPNLDDTTETFDEMLDMQTELLESLGLSCRVL 388
>gi|329766549|ref|ZP_08258092.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329136804|gb|EGG41097.1| seryl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 420
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 177/320 (55%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K I+DN + + I+ RN + + ++++ +K + D LR+++N +A ++ K
Sbjct: 2 LDPKIIKDNHQMIREMIKARNVEYDFDELIDVDQKRREFIIKTDELRKKKNQIAMEISQK 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + ++E KN+ L LE +++ + A IPN+ H VP+G ++ +
Sbjct: 62 KKAGQDISSTLDEMKNISAELAKLETLQIEIEKKYSSLALSIPNLIHESVPLGKDETANK 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
K G F+F + DH + + LD+ D + AA+V+G++FYYLKN+ V L LI++ L
Sbjct: 122 EIKKWGKIPEFDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYAL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ ++ + P ++ +E +Y IE D +IGT+E + +H D
Sbjct: 182 DFLAEKNYSLIQPPYMINRQSMEGAVI-ANDFEEVIYKIENEDLYMIGTSEHAMAAMHSD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ LPL+YA S CFR EAGA G +G++RVHQF K+E FVF +P+ES HE++
Sbjct: 241 EIIEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFTRPDESWDEHEKM 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
+ E+ Y L + +K+LL
Sbjct: 301 LSNAEEFYQKLEIPYKVLLL 320
>gi|323701687|ref|ZP_08113359.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333922257|ref|YP_004495837.1| seryl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533460|gb|EGB23327.1| seryl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333747818|gb|AEF92925.1| Seryl-tRNA synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 424
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 187/323 (57%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN---KM 131
+D K++R N E V + R +N +L+ LEL K V++L+ RN V+ ++
Sbjct: 2 LDIKFVRSNPELVKEGLAKRGANISLDEFLELDAKRREKLVVVEQLKNTRNVVSQEIGRL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDC 190
K + +E ++L E + + + + +++++ + + L + IPN+ H VPVG E+
Sbjct: 62 KKAGQDAEEKQL--EMRQVSQQIKDIDDEIRTIEERLGEILLAIPNLPHESVPVGKDEND 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + G P F+F K H++LG+AL+I DF+ A +V+G++F + K LE LIN+
Sbjct: 120 NLEVRRWGRPREFDFTPKPHWELGEALNILDFERAGKVTGARFTFYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + G+T + P IV S + G P+ A+ ++ +EG + LI TAE+PV +
Sbjct: 180 MLDLHTREHGYTEVFPPFIVNSDSMVGTGQLPKFAD-DMFKLEGLNYYLIPTAEVPVTNL 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ + ILS LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ FC+PE+S
Sbjct: 239 YREEILSGEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCKPEDSFDEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
E+L E + +LGL ++++L
Sbjct: 299 EKLTVNAEKVLQALGLPYRVVLL 321
>gi|426243776|ref|XP_004015724.1| PREDICTED: serine--tRNA ligase, mitochondrial [Ovis aries]
Length = 509
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 171/308 (55%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEG 147
+ +L ++ ++++ +++++ L EE+ AV ++ + + + Q L G
Sbjct: 83 SKDLPGIISTWQELRQLREQIRSLEEEKGAVTEAVRALVANQDNNEVQQDPQYQSLRAHG 142
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F
Sbjct: 143 REIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQP 202
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+
Sbjct: 203 RGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQYGLVNFTLNKLIHRGFTPMTVPD 262
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 263 LLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRM 322
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 323 VCSSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTE 381
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 382 LGLHFRVL 389
>gi|218134359|ref|ZP_03463163.1| hypothetical protein BACPEC_02253 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989744|gb|EEC55755.1| serine--tRNA ligase [[Bacteroides] pectinophilus ATCC 43243]
Length = 427
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 180/326 (55%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + L LV E L E+ QKE D +R RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKQNIRNKFQDQKLPLVDEVIALDEQARATQKEADEIRSSRNKISKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K + KN E L LE +L +++ + IPN+ P VP+G
Sbjct: 62 GMLMGQGKKEEAEELKA-QVAKN-AERLTELEAREAELNEKVTKIMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G+P V +F + H + + L D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIEKFGDPFVPDFEIPYHTDIMEKLHGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSNVVTGVMSFAEMDA--MMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+
Sbjct: 238 SMIGKFIDTITPEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPED 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S+ ++++L + DL+ SL + + L
Sbjct: 298 SNMWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|379706368|ref|YP_005261573.1| seryl-tRNA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374843867|emb|CCF60929.1| seryl-tRNA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 420
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 175/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +++R++ + V A+ R R + L + +LE D LR E A+ K+ G
Sbjct: 2 IDLRFLREHPDVVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEHKAMGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ E + + E +L + I N+ P GGED I+
Sbjct: 61 KASKEERPALLAEASEMSAKVKEAEAAQHAADADLDAAQRAISNVVQEGAPAGGEDDYIL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
T+G P F+F KDH +LG++L + D + A+VSG++FY+L +L++GL+
Sbjct: 121 LDTIGTPPEFDFTPKDHLELGESLGLIDMERGAKVSGARFYFLTGYGALLQLGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF + + +VY + D L+GT+E+P+ G H D
Sbjct: 181 RAVANGFTMMIPPVLVRPEIMAGTGFLGQ-HSAEVYHLADDDLYLVGTSEVPLAGYHSDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S +YA +S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE++D+ H+ L+
Sbjct: 240 ILDLSGGAKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVYCKPEDADAEHQRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E ++ +++ + ++++
Sbjct: 300 AWEREMLAAIEVPYRII 316
>gi|392423469|ref|YP_006464463.1| seryl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353432|gb|AFM39131.1| seryl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 421
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 183/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R N + V ++ RNS+ +L+ LE E+ + E++ L+ RNAV+ ++ G+
Sbjct: 2 LDLKYVRSNPDLVKEALQKRNSSISLDRFLEQEEERRRLLFEIESLKARRNAVSEEV-GR 60
Query: 135 LEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
L+ + + + L+ E + + + + LE+ ++ +E+++ IPN+ H VPVG E +
Sbjct: 61 LKKNGEDAEALVLEMREVGQTVKNLEQKSAEIVEEMEKVLFEIPNIPHTSVPVGLDESAN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ +T G P F+F K H++LG+ LDIFDF A +V+G++F + K LE LI++
Sbjct: 121 VEVRTWGTPRSFDFEPKAHYELGEKLDIFDFARAGKVTGARFTFYKGLGARLERSLISFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L +G+ + P +V S + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDRHTAKGYMEVLPPYMVNRSSMFGTGQLPK-FEEDAFKVMGTDYFLIPTAEVPVTNLYR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL + L +K+ A+S CFR+EAG+AG TRGL R HQF+K+E+ F PE S E
Sbjct: 240 DEILDGNCLTMKHCAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFTLPENSYEELEL 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L + E + L L ++++
Sbjct: 300 LTKDAESILQELELPYRVM 318
>gi|312128024|ref|YP_003992898.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311778043|gb|ADQ07529.1| seryl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 420
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 178/321 (55%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL E+ + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRSNPEKVQEGLSKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + L+ E K L + + L+ + ++ DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTDLMNELKELSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G +F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|302388768|ref|YP_003824589.1| seryl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302199396|gb|ADL06966.1| seryl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 426
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 180/321 (56%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM--- 131
+D K IR N + V + R + ANLE L+L E+ N+ EV++L+ RN + ++
Sbjct: 2 LDIKMIRSNPDEVKRALEKRGTQANLEEFLKLDEERRNLLVEVEQLKSLRNRESEEIARR 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K + EP++ LI + + + + + ++E + ++ ++L+Q IPN+ VPVG D
Sbjct: 62 KKQGEPAD--DLIRQMREVSDRIKEMDEKVKEIEEKLEQILLMIPNIPDESVPVGESDAD 119
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ + G P F+F K H++LG+ALDI DF+ A++++GS+F K LE LIN+
Sbjct: 120 NVEMRRWGEPRKFDFEPKPHWELGEALDILDFERASKITGSRFVVYKGAGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + K G+ + P IV + + G P+ D LI TAE+PV +
Sbjct: 180 MLDLHIEKHGYKEIFPPFIVNRASMTGTGQLPKFEEEAFKLFNNTDYFLIPTAEVPVTNL 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + IL + LP+ Y A+S CFR EAG+AG TRG+ R HQF+K+E+ F +PE+S
Sbjct: 240 HANEILEKEDLPIYYVAYSGCFRAEAGSAGRDTRGIIRQHQFNKVELVKFTEPEKSMEEL 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L E++ LGL ++++
Sbjct: 300 EKLTADAEEVLQLLGLPYRVV 320
>gi|282850025|ref|ZP_06259407.1| serine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|282580214|gb|EFB85615.1| serine--tRNA ligase [Veillonella parvula ATCC 17745]
Length = 426
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 180/321 (56%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N + V N+ NR++ +L+ + Y++ + V+ L+ RN+V +K+
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDC 190
K E ++ + I E K + + + + + ++ +L+ A +PNM VPVG ED
Sbjct: 62 KRNKENADEK--IAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADEDE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ ++ G P FNF V+ H+ LG++LDI DF+ A ++SG++F K LE LIN+
Sbjct: 120 NVEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ V K G+T + TP +V + G P+ A +Y +EG + LI TAE+ +
Sbjct: 180 MVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEGTEYFLIPTAEVTLTNY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S
Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E L E++ L L F+++
Sbjct: 299 ETLTDNAEEVLRLLELPFRVI 319
>gi|41056063|ref|NP_957473.1| seryl-tRNA synthetase, mitochondrial [Danio rerio]
gi|33416907|gb|AAH55610.1| Seryl-tRNA synthetase 2 [Danio rerio]
Length = 510
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 181/337 (53%), Gaps = 19/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D + + + EA++A + +R + A++ L++ +++ + VQ+E+ L + V+
Sbjct: 55 KPELDMRRVCEEAEALTAELEDRRGDLRPADVPLIISVWKNLQKVQEEISHLEGRKQVVS 114
Query: 129 NKMK---GKLEPSERQKLIEEGKNLKEGLVTLEE--DLVKLTDELQQEAQC----IPNMT 179
+ ++ GK + S L E G +EG E+ L EL++E C +PN T
Sbjct: 115 STVRELVGKHDKSTLSSLEEYGHAREEGRAIREKLNQLYLQEKELEKEHYCRALRLPNRT 174
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
HP VP+G E + + + VG F+F K H Q+G++LDI + VSG + YYL+
Sbjct: 175 HPSVPIGDESQARVVEVVGEKREFDFKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGA 234
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI---EGADQ 296
L+ L N+ + + KRGF P+ P+I++S V E CG QP +QVYS+ D
Sbjct: 235 GAQLQFALQNFAMDLLQKRGFIPMVVPDILKSVVFEGCGMQPHAQKSQVYSLNPKRSPDL 294
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L GT ++ V G MD ++ LP++ S C+R E G T GLYRVH F+K+EM
Sbjct: 295 NLAGTGKVGVAGYFMDHAVNLKDLPVRTVCSSTCYRAETD-TGRETWGLYRVHHFTKIEM 353
Query: 357 FVFC---QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES ++ + ++++++SSL LH+++L
Sbjct: 354 LGVSANETGEESSQLLDQFVTLQKEIFSSLKLHYRVL 390
>gi|374992790|ref|YP_004968289.1| seryl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211156|gb|AET65774.1| seryl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 421
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 181/319 (56%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N E V + R+ + +L+ L + + EV+ L+ RN V+ ++ G+
Sbjct: 2 LDLKFVRNNPEVVKEALHKRHVSISLDRFLSQEAERRKLLFEVETLKARRNTVSEEV-GR 60
Query: 135 LEPSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
L+ S + + L+ E + + + + LEE + E+++ IPN+ H VP+G E+ +
Sbjct: 61 LKKSGQNAESLVLEMREVGQKIKDLEETTANIVREMEKVLYEIPNIPHESVPIGTDENDN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I +T G P VF+F K HF+LG+ LDIFDF AA+V+G++F + K LE LI++
Sbjct: 121 IEVRTWGIPRVFDFEPKAHFELGEKLDIFDFVRAAKVTGARFTFYKGLGAKLERSLISFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L +G+T + P +V + G P+ + + + G D LI TAE+PV ++
Sbjct: 181 LDRHTSKGYTEILPPYLVNRGSMTGTGQLPKFED-DAFKVVGTDYFLIPTAEVPVTNLYR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL + LP+ + A+S CFR+EAG+AG TRGL R HQF+K+E+ F PE S E+
Sbjct: 240 DEILDGNQLPMYHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFSLPENSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E + L L ++++
Sbjct: 300 LTNDAESILQELELPYRVV 318
>gi|406889257|gb|EKD35496.1| hypothetical protein ACD_75C01887G0001 [uncultured bacterium]
Length = 425
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 182/324 (56%), Gaps = 9/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANKM-- 131
++ ++IR+N + V R + L+ E + L + EV+ L+ +RN V++++
Sbjct: 2 LELRFIRENLDLVKEKCIRRGMDITVLDEFAERDQNRLTILAEVEGLKNKRNTVSDQIAV 61
Query: 132 --KGKL-EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
KG E + + LI E + + + L+ +L + + LQ+ IPN+ H VPVG +
Sbjct: 62 YKKGSAAEKMQAEPLIVEMRETNQRIKELDGELGVIEESLQKIVMTIPNLCHDSVPVGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G F F K H+++G+ L+I DFD AA++SG++F LK LE L
Sbjct: 122 DADNLEIRKWGEKPAFAFTPKPHWEIGEQLNIIDFDRAAKLSGARFAILKGFGSKLERAL 181
Query: 248 INWTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ L +R G+T + P +V + + G P+ A+ ++ IEG D LI TAE+PV
Sbjct: 182 INFMLDLHTERHGYTEVLPPFMVNTPTMTATGQLPKFAD-DLFKIEGWDLYLIPTAEVPV 240
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
IH D L+E LP+KY A++ CFR+EAG+ G TRGL R HQF K+E+ F PE SD
Sbjct: 241 TNIHRDETLAEKDLPVKYTAYTPCFRSEAGSHGRDTRGLIRQHQFDKVELVKFTTPETSD 300
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ E L+ E + LGLH++++
Sbjct: 301 TELEALLVDAETVLQLLGLHYRVV 324
>gi|146418501|ref|XP_001485216.1| hypothetical protein PGUG_02945 [Meyerozyma guilliermondii ATCC
6260]
Length = 462
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 20/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNR----NSNANLELVLELYEKMLNVQKEVDRLREERNAV 127
+ +D K I K+ +I R + NLE ++E + + K++D LR ER+ +
Sbjct: 35 RPVLDIKSIIARKDEYRDSINKRKLPQSYVQNLEDIVERRNHEVELAKQIDSLRHERSIM 94
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP--- 184
MK + P ++ LIE LK L LEE +L+ E+ +A+ +PN+ P +
Sbjct: 95 GEAMKKEKSPQIKESLIE----LKLQLKYLEEQHKELSSEILDKAEGLPNLIDPTIAESE 150
Query: 185 ---VGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAV 241
V +C + V F DH ++ + L I DF +AA+VSGS +YYL +
Sbjct: 151 AEIVQFINCESEKDAVSIKPATTF---DHREIAENLSIVDFQSAAKVSGSSWYYLIGDGA 207
Query: 242 MLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--QVYSIEGADQCLI 299
+LE L+ + L + + G+ +T P IV++ V CGF+P N Q+Y IEG + L
Sbjct: 208 LLEQALVQYGLKKARQYGYRMVTPPSIVKNEFVHACGFKPNDQNNEKQIYGIEGGNLSLT 267
Query: 300 GTAEIPVGGIHMDSILSESL-LPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
GTAEIP+G IH + P+KY S +R EAGA G T+GLYRVH+F+K+E+F
Sbjct: 268 GTAEIPLGAIHSGTDFENGQKFPIKYVGVSRAYRAEAGARGKDTKGLYRVHEFTKVELFH 327
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
F PE + E+L +++ ++ LGL K++ A+
Sbjct: 328 FTTPEYAKQELEDLRQLQTEIIEELGLMSKMIKMPAD 364
>gi|302386494|ref|YP_003822316.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1]
gi|302197122|gb|ADL04693.1| seryl-tRNA synthetase [Clostridium saccharolyticum WM1]
Length = 429
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 178/325 (54%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ + L LV +EL E+ ++E D LR ERN ++ ++
Sbjct: 2 LDLKFVRENPEIVKENIKNKFQDNKLSLVDEVIELDEQNRKTKQEGDALRAERNKLSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K ++ + + L LEE L + +++ IPN+ P VP+G
Sbjct: 62 GALMGQGKKEEAEGMK--KQVTDASQHLAQLEEKERDLEERIKKIMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V F + H + ++ D D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEVERYGEPVVPEFDIPYHTDIMESFDGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 180 SVISYARDFMINRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 239 MIGKFIDTILPEGKLPQTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEDS 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 299 MEWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|407004056|gb|EKE20520.1| hypothetical protein ACD_7C00541G0002 [uncultured bacterium]
Length = 438
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 193/338 (57%), Gaps = 29/338 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I++NK+AV+ +N+N +LE +LEL + + + + V++L+ ++N + N++
Sbjct: 2 LDIKFIKENKKAVTEAAKNKNIKLDLEKLLELDTQRVELLQAVEKLQAKKNEINNEI--- 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV-----GGED 189
+ +++++I G +KE L LE K+ D+ + +PN+ D P+ G E+
Sbjct: 59 AKAKDKKEVIARGTKIKEELAELEPKFKKIKDDFESLMVQVPNVVSADTPIAKDESGNEE 118
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
I G F+FPVK+H +LGK LDI D + A+V+G + YYLKNE L M L+
Sbjct: 119 VLIF----GEIPKFDFPVKNHIELGKDLDILDLEKGAKVAGYRGYYLKNEGATLAMALMM 174
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCG-FQPRGANTQ---VYSIEGADQ--------- 296
+ L+++I++G+ P+ P +V+ S + G F + N++ +Y + AD+
Sbjct: 175 YALNKMIEKGYVPMIPPTLVKGSALFGTGYFSGKEYNSKEDNIYQLASADEEVDGALSKE 234
Query: 297 --CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
L+GTAE + + D L E LP+K A +S C+R+E G+ G T+G YRVH+F K+
Sbjct: 235 KRFLVGTAEPSLLAYYADDTLKEEDLPIKVAGYSQCYRSEIGSYGKDTKGFYRVHEFMKV 294
Query: 355 EMFVFCQPEESDS--YHEELIRIEEDLYSSLGLHFKLL 390
E V + ++ S HE++ I ++++ LGL +++L
Sbjct: 295 EQVVLMKADDDASIKMHEDMFAISKEIHEELGLPYRVL 332
>gi|27806133|ref|NP_776882.1| serine--tRNA ligase, mitochondrial precursor [Bos taurus]
gi|23822218|sp|Q9N0F3.1|SYSM_BOVIN RecName: Full=Serine--tRNA ligase, mitochondrial; AltName:
Full=SerRSmt; AltName: Full=Seryl-tRNA synthetase;
Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
synthetase; Flags: Precursor
gi|9188533|dbj|BAA99556.1| mitochondrial seryl-tRNA synthetase [Bos taurus]
gi|61553472|gb|AAX46412.1| seryl-tRNA synthetase 2 [Bos taurus]
gi|146186974|gb|AAI40549.1| SARS2 protein [Bos taurus]
gi|296477779|tpg|DAA19894.1| TPA: seryl-tRNA synthetase 2 precursor [Bos taurus]
Length = 518
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 170/306 (55%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AV ++ + + + Q L G+
Sbjct: 85 DLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|269792616|ref|YP_003317520.1| seryl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100251|gb|ACZ19238.1| seryl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 427
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D KW+RDN EA +RNR S+ L+ +LEL E+ + EV+ ++ RN + ++ +
Sbjct: 2 MDIKWVRDNVEAAREYLRNRRSDFPLDRLLELDERRRQILGEVEEIKARRNEGSKRVGEM 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS-I 192
K + L+E+ ++L + + LE +L + EL +PN H VPVG ++ S
Sbjct: 62 KRRGEDASALMEDMRSLGDRVSQLEAELGSVQGELDDLMLRMPNRPHSTVPVGEDETSNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ +T G P F+F + H+++G+ L I DF+ A ++ S+F LK LE L+ + L
Sbjct: 122 VVRTWGEPRRFDFEPRPHWEIGEILGIMDFERAVRLAESRFVVLKGLGARLERALVQYML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
GF ++ P +V S+ + G P+ + +Y D LI TAE+P+ +H
Sbjct: 182 DLHTSNGFIEVSPPFLVSSATMTGTGQLPK-FSEDLYRCANDDLWLIPTAEVPLTNLHSG 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL E LPL Y A + CFR EAG+ G +G+ RVHQF K+E+ C+PEES E L
Sbjct: 241 EILDEDSLPLHYTAHTPCFRREAGSYGRDVKGMLRVHQFPKVELVKICRPEESYDELESL 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
E + LGL ++++
Sbjct: 301 TASAESVLKGLGLPYRVVCL 320
>gi|307354815|ref|YP_003895866.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307158048|gb|ADN37428.1| seryl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 425
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 183/321 (57%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELY---EKMLNVQKEVDRLREERNAVANKM 131
++ K+IR + + V A+++ R L V +L E+ +Q E++ +R RN ++ ++
Sbjct: 2 LELKFIRSSPDVVRADLKKRGDAEKLAWVDDLLAKDERSREMQVEINSMRNRRNIISREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + E L+EE K+L + E +L ++ ++++ +PN+ H VPVG +D
Sbjct: 62 NQTRKAGGEISGLLEEAKSLPSKIKDAETELAEIQEKIKFYQMRVPNILHESVPVGADDS 121
Query: 191 SIIRKT-VGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P+V +F VK+H +L + +F+ AA++SG+ FY LK ++++ L
Sbjct: 122 ENVEVSRWGEPTVPSFEVKNHGELAIEKGLAEFERAAKISGAGFYILKGRLALMDLALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + +RG+TP+ P ++ + E N +Y I+G D+ LI T+E P+ +
Sbjct: 182 LAIDLLAERGYTPVMPPYMMNRAAYEGVTDLSDFENV-MYKIDGEDEFLIATSEHPMAAM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+MD I E LPL+ A S CFR E G+ G T+GL+RVHQF+K+E F++C+ E+S H
Sbjct: 241 YMDEIFEEKDLPLRLAGISTCFRREIGSHGLDTKGLFRVHQFNKVEQFIYCKQEDSWRLH 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EEL++ ED++ L L + ++
Sbjct: 301 EELLKNAEDIFRMLKLPYHVV 321
>gi|75765332|pdb|1WLE|A Chain A, Crystal Structure Of Mammalian Mitochondrial Seryl-Trna
Synthetase Complexed With Seryl-Adenylate
gi|75765333|pdb|1WLE|B Chain B, Crystal Structure Of Mammalian Mitochondrial Seryl-Trna
Synthetase Complexed With Seryl-Adenylate
Length = 501
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 170/306 (55%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AV ++ + + + Q L G+
Sbjct: 68 DLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGRE 127
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 128 IRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 187
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 188 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 247
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 248 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 307
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 308 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 366
Query: 385 LHFKLL 390
LHF++L
Sbjct: 367 LHFRVL 372
>gi|440910317|gb|ELR60125.1| Seryl-tRNA synthetase, mitochondrial [Bos grunniens mutus]
Length = 518
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 170/306 (55%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AV ++ + + + Q L G+
Sbjct: 85 DLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|383788736|ref|YP_005473305.1| seryl-tRNA synthetase [Caldisericum exile AZM16c01]
gi|381364373|dbj|BAL81202.1| seryl-tRNA synthetase [Caldisericum exile AZM16c01]
Length = 424
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 180/319 (56%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D IR+ E V I+N+ + L + LE+ +K + K++D LR R ++ +
Sbjct: 2 LDPNLIREKPEIVKEGIKNKGGDPTLVDKFLEVDKKRRELVKDIDNLRHTRKELSESIGR 61
Query: 134 KLEPSERQKLIE-EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-S 191
KL+ E+ + E + L E + E++L + ++ IPN+ HP VPVG ++ +
Sbjct: 62 KLKQGEQVDGVRAEVRKLGEEINQKEKELENVEKIYKEILLSIPNLPHPSVPVGKDETEN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ + G FNFP K H+++ +AL + DF A ++SGS+FY L LE LI++
Sbjct: 122 VVLRKEGKIREFNFPPKPHWEIAEALGLIDFKRAVKISGSRFYVLTGLGAKLERALISFM 181
Query: 252 LSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ I+ G+ + P ++ + G P+ A +Y IEG + L TAE+PV +H
Sbjct: 182 IDYHIEHHGYKEIFPPFLINRDSMIGTGQLPKFAE-DMYKIEGEELYLDPTAEVPVTNLH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL+ES LP+KY A++ CFR EAGAAG TRG+ RVHQF+K+EM F +PEES
Sbjct: 241 RDEILNESDLPIKYVAYTACFRKEAGAAGKDTRGIIRVHQFNKVEMVRFTKPEESYKNLY 300
Query: 371 ELIRIEEDLYSSLGLHFKL 389
EL+ ED+ +L L +++
Sbjct: 301 ELLDNAEDILRALELPYQI 319
>gi|227496500|ref|ZP_03926782.1| serine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
gi|226833991|gb|EEH66374.1| serine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
Length = 424
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 171/324 (52%), Gaps = 13/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E + R R ++ +L + +++ E + LR E+ V+ +
Sbjct: 2 IDLRDLRENPERYRDSQRARGADVDLVDRIIDADEARRTTLATFESLRAEQKVVSRSVGK 61
Query: 134 KLEPSERQKLIEEGKNLKEGL--VTLEEDLVKLT-DELQQEAQCIPNMTHPDVPVGGE-D 189
P ER+ + + K L E + E D T DEL + Q + P GGE D
Sbjct: 62 ASSPQEREAALAQAKELAERVRGAQAESDQAAATLDELAHQFQNVIE----GAPSGGEED 117
Query: 190 CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
++R P F F DH LG+ LDI D A+VSGS+FYYLK + LE+
Sbjct: 118 YVVLRHEGPQPRDFASEGFEPADHLTLGEGLDIIDTKRGAKVSGSRFYYLKGAGMRLELA 177
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+ L + + GF P+TTP +V V+ GF A+ ++Y + D L GT+E+ +
Sbjct: 178 LMTAALDKATEHGFIPMTTPTLVSPQVMGGTGFLGLHAD-EIYYLPADDLYLTGTSEVAL 236
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G H D IL P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF + +PE++
Sbjct: 237 AGYHTDEILDLEEGPKRYLGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFAYVRPEDAA 296
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ HE L+ +EE++ +GL ++++
Sbjct: 297 AEHERLLALEEEMLHLVGLPYRVI 320
>gi|406592790|ref|YP_006739970.1| seryl-tRNA synthetase [Chlamydia psittaci CP3]
gi|406594985|ref|YP_006742061.1| seryl-tRNA synthetase [Chlamydia psittaci MN]
gi|410858825|ref|YP_006974765.1| seryl-tRNA synthetase [Chlamydia psittaci 01DC12]
gi|405783417|gb|AFS22165.1| seryl-tRNA synthetase [Chlamydia psittaci MN]
gi|405788662|gb|AFS27405.1| seryl-tRNA synthetase [Chlamydia psittaci CP3]
gi|410811720|emb|CCO02375.1| seryl-tRNA synthetase [Chlamydia psittaci 01DC12]
Length = 426
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E A +R ++ +L+ +L+L +++ N++ + + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECEARLRKKDPLISLQPILDLDKEVRNLKTQTEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDASSLIDSVEKIAQDLANLEPLLEQKESTLQDLLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG+ F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAQTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHDILFGSGQIPK-FDGQYYRVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D ++
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYD 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLSVVEDILTELKLPYRLSLL 322
>gi|61555698|gb|AAX46747.1| seryl-tRNA synthetase 2 [Bos taurus]
Length = 518
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 170/306 (55%), Gaps = 15/306 (4%)
Query: 99 NLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEGKN 149
+L ++ ++++ +++++ L EE+ AV ++ + + + Q L G+
Sbjct: 85 DLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGRE 144
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKD 209
+++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F +
Sbjct: 145 IRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQPRG 204
Query: 210 HFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIV 269
H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+++
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 270 RSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 265 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLG 384
S C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ + LG
Sbjct: 325 SSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 383
Query: 385 LHFKLL 390
LHF++L
Sbjct: 384 LHFRVL 389
>gi|404372731|ref|ZP_10978016.1| serine-tRNA ligase [Clostridium sp. 7_2_43FAA]
gi|226914105|gb|EEH99306.1| serine-tRNA ligase [Clostridium sp. 7_2_43FAA]
Length = 425
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 181/328 (55%), Gaps = 18/328 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ ++ L LV +EL +K+ +++ + LR +RN + ++
Sbjct: 2 LDLKFVRENPEIVKKNIKNKFQDSKLPLVDEVIELDKKLREAKQQAEALRADRNKFSKQI 61
Query: 132 -----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK E +E ++K+ E + L E LE +L++ + +PN+ P VP
Sbjct: 62 GALMAQGKREEAEEMKRKVTENSERLSE----LEVKETELSERVNNIMMTLPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F V H ++ + L D D+A +V+GS FYYL L
Sbjct: 118 IGKDDSENVEVERFGEPKVPDFEVPYHTEIMEKLSGLDLDSARKVAGSGFYYLMGNVARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTA 302
+I++ +I RGFT P ++RS VV F A +Y IEG D LIGT+
Sbjct: 178 HSAIISYARDFMIDRGFTYCIPPYMIRSEVVTGVMSFAEMDA--MMYKIEGEDLYLIGTS 235
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + G ++D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+P
Sbjct: 236 EHSMIGKYIDTILPEDSLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKP 295
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES ++E+L +L+ SL + + L
Sbjct: 296 EESMDWYEKLWVNTVELFRSLDIPVRTL 323
>gi|383785764|ref|YP_005470333.1| seryl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
gi|383108611|gb|AFG34214.1| seryl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
Length = 426
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 172/321 (53%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVAN---K 130
ID K +R N E IR RN S L+ ++EL + N V+ L+ +RN ++ K
Sbjct: 2 IDLKLLRKNPELFYEAIRKRNYSTEILDKIVELDREWRNYVNIVNNLKAKRNELSKIVAK 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K + + E ++I E K L + + E +L D++ A +PN+ H VPVG ++
Sbjct: 62 LKAEGKNEEANEIIAESKKLGDEIAQYEAKEKELEDQMYNLALYVPNVPHESVPVGKDEA 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+F K H+ LG L + DFD A++SGS+F + E LE L
Sbjct: 122 ENVEVRRWGEPRKFDFKPKAHWDLGPELGMLDFDRGAKLSGSRFTVMFGEIARLERALAQ 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ L + G+ + P +V+ + G P+ A ++Y+ E D LI TAE+P+ +
Sbjct: 182 FMLDTHTQNGYIEVNVPHLVKRETITATGQLPKFAE-ELYTCERDDLFLIPTAEVPLAAL 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H+D IL E+ LP+KY AF+ C+R EAG+ G RGL R HQF K+E+ + PE S
Sbjct: 241 HIDEILEENQLPIKYTAFTPCYRREAGSYGKDVRGLIRQHQFEKVELVWYTTPERSFEDL 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L R E + LGL ++++
Sbjct: 301 EQLTRDAERILQLLGLPYRVV 321
>gi|15618779|ref|NP_225065.1| seryl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
gi|15836403|ref|NP_300927.1| seryl-tRNA synthetase [Chlamydophila pneumoniae J138]
gi|16752169|ref|NP_445536.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39]
gi|33242230|ref|NP_877171.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
gi|8928381|sp|Q9Z736.1|SYS_CHLPN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|4377187|gb|AAD19008.1| Seryl tRNA Synthetase-2 [Chlamydophila pneumoniae CWL029]
gi|7189912|gb|AAF38777.1| seryl-tRNA synthetase [Chlamydophila pneumoniae AR39]
gi|8979244|dbj|BAA99078.1| seryl tRNA synthetase-2 [Chlamydophila pneumoniae J138]
gi|33236741|gb|AAP98828.1| seryl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
Length = 427
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ +LE VL L +++ ++ + + L+ +R ++ + K
Sbjct: 2 LDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+E + L L +E+ L + +L + +PN D+PV + +
Sbjct: 62 KTQGVDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNYPADDIPVSEDKAGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+VG+ +F+FP K H +L + LDI DF AAA+ +GS + KN V+LE L+ + L
Sbjct: 122 VIKSVGDLPIFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
+ GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G
Sbjct: 182 QKQAAHGFQLWLPPLLVKKEILFGSGQIPK-FDGQYYRVEDGEQYLYLIPTAEVVLNGFR 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+E LPL YAA + CFR EAGAAG RGL RVHQF K+EMF F P + D +E
Sbjct: 241 SQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ I E++ + L L ++L L
Sbjct: 301 KMLSIVEEMLTELKLPYRLSLL 322
>gi|373253250|ref|ZP_09541368.1| seryl-tRNA synthetase [Nesterenkonia sp. F]
Length = 429
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 175/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + ++ E A+ R R + +L +LV+ + + LR E+ A ++
Sbjct: 2 IDTKDLIEHPEKYRASQRARQEDESLVDLVISAQQTRNEAIARFESLRAEQKAFGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+ +L+ E K+L + + T E + + + + +PN H VP GGED +
Sbjct: 61 QASGEEKDRLLAEVKDLSQRVKTAEAASNEAEETFRSLQRRVPNPIHEGVPAGGEDDFDV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+T G+P F F KDH +L ++L D + A+ SG++FY+L+ LE+ ++
Sbjct: 121 LRTEGSPRDFAAEGFTPKDHLELAESLGAVDMERGAKTSGARFYFLQGVGARLELAMMQM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + + GFTP+ TP +VR ++ GF + ++Y +E D L GT+E+ + G H
Sbjct: 181 GMDQALAAGFTPMITPTLVRPETMQGTGFDVE-HDDEIYRLERDDLYLTGTSEVAIAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S P + A +S C+R EAG+ G TRG+ RVHQF+KLEMFV+C E+S + HE
Sbjct: 240 ADEILDLSSGPSRIAGWSTCYRREAGSHGKDTRGILRVHQFNKLEMFVYCSAEDSAAEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE + + + L ++++
Sbjct: 300 RLLAWEEQMLAKMELPYRVV 319
>gi|358396243|gb|EHK45624.1| hypothetical protein TRIATDRAFT_283278 [Trichoderma atroviride IMI
206040]
Length = 506
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 188/382 (49%), Gaps = 39/382 (10%)
Query: 39 PPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNA 98
P ++L AR SA + + A KP ID K IR N E RN
Sbjct: 11 PQWQLRARICSARTFSDV----KRPSSAPKP----IIDIKHIRQNPELYEKTCLERNYKR 62
Query: 99 NLEL---VLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE-----------RQKLI 144
+ +L+ + +QK+ LRE N + ++ S+ R+K+
Sbjct: 63 QASYPARIGQLHAEWQQLQKDGRALRERSNLLRKELANSATSSDDEDLKDVKNMSREKVQ 122
Query: 145 EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFN 204
EE + LK LV +E+ +++ A IPN+T D P G E+ ++ PS
Sbjct: 123 EEARALKSELVVIEKKEADAVTQMEALALEIPNLTSADTPRG-EEFEVLSYINEPPSFEQ 181
Query: 205 FP---VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFT 261
P + H +G L I DF AA SG +YYL EA LE LI + L+ V K G+T
Sbjct: 182 GPERIWRSHVHIGAELGILDFAGAATASGWGWYYLLGEAAQLEQALIQYALAVVTKHGWT 241
Query: 262 PLTTPEIVRSSVVEKCGFQPRGAN--TQVYSIEGA---------DQCLIGTAEIPVGGIH 310
++ P +V S + CGFQPR N QVY+I + + L GT+EIP+ G+
Sbjct: 242 QVSPPTMVYSHIGAACGFQPRDQNGEQQVYAIAQSRADAERGVPEMSLAGTSEIPLAGMK 301
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH- 369
S + LPLK A S C+R EAGA G T+GLYRVH+FSK+EMF + P+E ++
Sbjct: 302 AMSTIDAVDLPLKRVAVSRCYRAEAGARGAETKGLYRVHEFSKVEMFAWTGPDEFEAREA 361
Query: 370 -EELIRIEEDLYSSLGLHFKLL 390
+E++ I+ ++ SLGL+ ++L
Sbjct: 362 FDEMLDIQTEILLSLGLYCRVL 383
>gi|240104000|ref|YP_002960309.1| seryl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259516204|sp|C5A226.1|SYS_THEGJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239911554|gb|ACS34445.1| Seryl-tRNA synthetase (serS) [Thermococcus gammatolerans EJ3]
Length = 455
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 187/349 (53%), Gaps = 42/349 (12%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+ E V ++ R ++ + LEL K K++++LR+ERN +A
Sbjct: 2 LDIKLIREKPELVKKDLIKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQLAVQI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K K EP E L+ + + + LE+++ L ++ +PN+TH VPVG +
Sbjct: 62 GKRKKAGEPIE--DLLARSNEIVKQIEELEKEVEALKKKIDYYLWRLPNITHESVPVGKD 119
Query: 189 DC-------------------SIIRKTVG--NPSVFNFPVKDHFQLGKALDIFDFDAAAE 227
D S +++G + V ++ + H + + L D + AA+
Sbjct: 120 DTENVPIRFWGKAKVWEGFLESFKEQSLGKMDYEVLSWRPRLHVDMLELLRGADLERAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT- 286
VSGS+FYYL NE V+L++ LI + L +I++GFTP+ P +VR V E GA T
Sbjct: 180 VSGSRFYYLLNELVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEE-------GATTF 232
Query: 287 -----QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
+Y +EG D LI TAE P+ G+H + IL LPL Y S CFR EAG AG
Sbjct: 233 EDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKD 292
Query: 342 TRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
T+G++RVHQF K+E FV+ +PEES +HE++I E+L+ L + ++++
Sbjct: 293 TKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIANAEELFQELEIPYRVV 341
>gi|374856280|dbj|BAL59134.1| seryl-tRNA synthetase [uncultured candidate division OP1 bacterium]
Length = 425
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 178/324 (54%), Gaps = 8/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
+D K IR+N + V +R R+ +L +L+L E+ + +V++L+ +RN + +
Sbjct: 2 LDIKLIRENPQEVERRLRTRDETISLGPLLKLDEERRKLIAQVEQLKAQRNKATEQIAQL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE--D 189
K + SE Q LI E L + + +L+ L ++ E+Q +PN+ H VPV D
Sbjct: 62 KRAKKESEAQALIAEMGRLADQIKSLDSTLSQIEQEIQDFLARLPNLPHSSVPVSPNKGD 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
I+R+ PS F+FP K H +LG+ L I D AA+++GS+F + + +LEM LI+
Sbjct: 122 KKILREFGQKPS-FSFPFKSHVELGEQLGILDLPRAAKIAGSRFPLYRGKGALLEMALIS 180
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + + G+ P+ P + G P+ A+ QVY L TAE+ +
Sbjct: 181 FMLRYQTEQNGYIPILPPFLGNPESFFAAGQLPKFAD-QVYFCPEDKLYLNPTAEVLLAN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D IL S LPLKY A++ CFR EAG G RGL R+HQF+K+E+F F +PEES +
Sbjct: 240 LHRDEILDGSQLPLKYCAYTACFRREAGTYGEEERGLIRMHQFNKVELFKFTKPEESYTE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLLLF 392
E L+ ED+ L +H+++ L
Sbjct: 300 LESLVEDAEDILKELNVHYRVALL 323
>gi|296166962|ref|ZP_06849378.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897701|gb|EFG77291.1| serine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 434
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 173/319 (54%), Gaps = 4/319 (1%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKM 131
A ID K +R++ +AV + NR + L + +L D LR E+ + A+K
Sbjct: 15 AVIDLKLLREDPDAVRRSQLNRGEDPTLVDALLAADAARRAAISSADALRAEQKS-ASKS 73
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
G P ER + K L E + E + I N+ VP GGED
Sbjct: 74 VGAASPEERPARLARAKELAEQVKAAESEQADAEAAFTAAHMAISNVVIDGVPAGGEDDY 133
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ VG P+ P KDH +LG++L + D A+VSGS+FY+L +L++GL+
Sbjct: 134 RVLDVVGEPARLEHP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLA 192
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L ++ GF P+ P +VR V+ GF A+ ++Y +E D L+GT+E+P+ G H
Sbjct: 193 LRLAVENGFIPMIPPVLVRPEVMAGTGFLGAHAD-EIYRVEADDLYLVGTSEVPLAGYHA 251
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+P ++++ H+
Sbjct: 252 DEILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCKPADAEAEHQR 311
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ + ++ + +G+ ++++
Sbjct: 312 LLGWQREMLARIGVPYRVI 330
>gi|154496097|ref|ZP_02034793.1| hypothetical protein BACCAP_00381 [Bacteroides capillosus ATCC
29799]
gi|150274652|gb|EDN01716.1| serine--tRNA ligase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 433
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 177/328 (53%), Gaps = 13/328 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D ++IR+N EAV NI+ + +A L LV LEL E + LR RN ++ ++
Sbjct: 2 LDIRFIRENPEAVKENIKKKFQDAKLPLVDKVLELDAANRAAMTEANELRASRNTLSKQI 61
Query: 132 -----KGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+ K +PS E + + + K + L LEE VKL +E++ IPN+ P V
Sbjct: 62 GMLMGQAKKDPSKLEEAEAVKAQVKANADRLAELEEQEVKLAEEIRHIMLQIPNIIDPSV 121
Query: 184 PVGGED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P+G +D C++ + G P +F + H Q+ + + D DAA VSG+ FYYL +
Sbjct: 122 PIGPDDSCNVEVERFGEPVTPDFEIPYHTQIMETFNGVDMDAAGRVSGNGFYYLMGDIAR 181
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L ++ + +I +GFT P ++ +VVE Q + +Y IEG D LIGT+
Sbjct: 182 LHSAVLAYARDFMINKGFTYCIPPFMIHGNVVEGVMSQTE-MDAMMYKIEGEDLYLIGTS 240
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + G +D I+ E LP ++S CFR E G+ G RG+YR+HQF K EM V C+P
Sbjct: 241 EHSMIGKFIDQIIPEDNLPQTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMVVVCKP 300
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+S +++E++ R +L+ SL + + L
Sbjct: 301 EDSMAWYEKMWRFSVELFRSLDIPVRQL 328
>gi|293190704|ref|ZP_06608958.1| serine--tRNA ligase [Actinomyces odontolyticus F0309]
gi|292820810|gb|EFF79769.1| serine--tRNA ligase [Actinomyces odontolyticus F0309]
Length = 425
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 172/331 (51%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +R+N E A+ R R +N L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRENPEPARASQRARGANPGLVDEIIEADVARREALQAFETLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E E + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILAQAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGV 110
Query: 184 PVGGE-DCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGE D ++R P F F +DH LG+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEEDFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ L+ + + + GF P+ TP +V V+ GF ++ ++Y + D L
Sbjct: 171 GARLELALMTMAMDQALANGFVPMMTPTLVTPQVMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSDGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PEE+ H+ + EE++ + + L ++++
Sbjct: 290 CRPEEAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|269797577|ref|YP_003311477.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094206|gb|ACZ24197.1| seryl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 426
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 181/321 (56%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N + V N+ NR++ +L+ + Y++ + +V+ L+ RN+V +K+
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGQVEELKALRNSVTEEISKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDC 190
K E ++ + I E K + + + L+ + ++ +L+ A +PNM VPVG ED
Sbjct: 62 KRNKENADEK--IGEMKKVGDEIAELDNRIREVETKLRDAALMLPNMCDASVPVGADEDE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ ++ G P F+F V+ H+ LG+ LDI DF+ A ++SG++F K LE LIN+
Sbjct: 120 NVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ V K G+T + TP +V + G P+ A +Y +EG + LI TAE+ +
Sbjct: 180 MVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEGTEYFLIPTAEVTLTNY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S
Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E L E++ L L F+++
Sbjct: 299 ETLTDNAEEVLRLLELPFRVI 319
>gi|374578731|ref|ZP_09651825.1| seryl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
gi|374414813|gb|EHQ87248.1| seryl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
Length = 421
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 179/322 (55%), Gaps = 11/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN----- 129
+D K++R+N + + + R+ + +L+ L+ E+ + EV+ L+ RN+V+
Sbjct: 2 LDIKFVRNNPQVIKEALEKRHVSISLDHFLKQEEERRKLLFEVETLKARRNSVSEEVGHL 61
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-E 188
K KGK + + L+ E + + + + LEE + E+++ IPN+ H VPVG E
Sbjct: 62 KKKGK----DAESLVLEMREVGQAIKNLEEKTANVVREMEKVLYEIPNIPHTSVPVGSDE 117
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ ++ ++ G P VF F K H+++G+ LDIFDF A +V+G++F + K LE LI
Sbjct: 118 NANVQVRSWGTPRVFEFEPKAHYEVGEKLDIFDFVRAGKVTGTRFTFYKGLGAKLERSLI 177
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
++ L G+T + P +V + + G P+ + + I G D LI TAE+PV
Sbjct: 178 SFMLDRHTANGYTEILPPYMVNRASMMGTGQLPKFED-DAFKIVGTDYFLIPTAEVPVTN 236
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ + IL S LP+ + A+S CFR+EAG+AG TRGL R HQF+K+E+ F PE S
Sbjct: 237 LYREEILDGSRLPIHHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFSLPENSYEE 296
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E L R E + L L ++++
Sbjct: 297 LESLTRDAESILQELELPYRVM 318
>gi|325288210|ref|YP_004264391.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963611|gb|ADY54390.1| seryl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 421
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 176/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +R N E V + +RNS+ NL+ L+L E+ + +V++++ RN V+ ++ GK
Sbjct: 2 LDLKLVRSNPERVKEALNHRNSDINLDDFLKLDEERRKILADVEKMKARRNKVSEEV-GK 60
Query: 135 LEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
L+ + +L+ E + E + LE DL + ++ + IPN+ H VPVG ++
Sbjct: 61 LKKAGENADQLVTEMREEGERIKALESDLNTIDRQMTEILYVIPNIPHSTVPVGKDEHDN 120
Query: 193 IR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I + G P F F K HF+LG+ LDI DF +V+G++F + K LE LIN+
Sbjct: 121 IELRKWGTPKKFEFEPKAHFELGENLDILDFVRGGKVTGARFTFYKGLGAKLERSLINFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L +G++ + P +V + + G P+ + +E + LI TAE+PV ++
Sbjct: 181 LDRHTAKGYSEIFPPFMVHRNSMFGTGQLPK-FEQDAFKVENTEYFLIPTAEVPVTNLYR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL LP+++ A+S CFR EAGAAG TRG+ R HQF+K+E+ F PE+S EE
Sbjct: 240 DEILEAEKLPIRHCAYSACFRAEAGAAGRDTRGIIRQHQFNKVELVKFSLPEKSYEELEE 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E + L L ++++
Sbjct: 300 LTNSAETILQELELPYRVV 318
>gi|407459714|ref|YP_006737817.1| seryl-tRNA synthetase [Chlamydia psittaci M56]
gi|405785744|gb|AFS24489.1| seryl-tRNA synthetase [Chlamydia psittaci M56]
Length = 426
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E A +R ++ +L+ +L+L +++ N++ + + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECEARLRKKDPLISLQPILDLDKEVRNLKTQTEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDASSLIDSVEKIAQDLANLEPLLEQKESTLQDLLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG+ F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHDILFGSGQIPK-FDGQYYRVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D ++
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYD 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLSVVEDILTELKLPYRLSLL 322
>gi|334338276|ref|YP_004543428.1| seryl-tRNA synthetase [Isoptericola variabilis 225]
gi|334108644|gb|AEG45534.1| Seryl-tRNA synthetase [Isoptericola variabilis 225]
Length = 422
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 172/320 (53%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RDN + V A+ + R + A ++ L+ + + E +RLR E+ A+ K
Sbjct: 2 IDLRLLRDNPDVVRASQQARGEDPALVDAALDADARRRSSLAEFERLRAEQKAL-GKQVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ K+L E + + + EL + IPN+ P GGED ++
Sbjct: 61 KASGDEKAALLARTKHLAEEVKARQGEANAAEAELDELLYRIPNVVE-GAPPGGEDDFVV 119
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F DH +LG+ L D A+VSGS+FY+L LE+ ++N
Sbjct: 120 LKEVGAPRDFAAEGFTPLDHLELGERLGAIDTARGAKVSGSRFYFLTGVGARLELAILNA 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + GFTP+ TP +V + GF A+ +VY IE D L+GT+E+ + G H
Sbjct: 180 AMDLAVSEGFTPMITPTLVTPDTMRGTGFLGAHAD-EVYRIERDDLYLVGTSEVALAGYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ S P +YA +S C+R EAG+ G RG+ RVHQF K+EMF +C E++ + HE
Sbjct: 239 GDEIVDLSAGPKRYAGWSACYRREAGSHGKDVRGIIRVHQFHKVEMFSYCSVEDAAAEHE 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE + +++ L ++++
Sbjct: 299 RLLAWEEAMLAAVDLPYRVI 318
>gi|383783221|ref|YP_005467788.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
gi|381376454|dbj|BAL93272.1| putative seryl-tRNA synthetase [Actinoplanes missouriensis 431]
Length = 420
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 180/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ E + A+ R R + +L + +L E+ + + +R E+ ++ ++
Sbjct: 2 IDLRLLREDPELIRASQRLRGESTDLVDALLSADEERRAATQRFESVRAEQKSIGKEV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ K+L + E + L++ +PN+ P GGED ++
Sbjct: 61 KASGDERAALLARTKDLALEVKAAEAAAGEAEQALRRAHLAVPNVVEDGAPAGGEDDFVV 120
Query: 194 RKTVGN-PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ VG P + N KDH ++G+AL D + A+VSGS+FY+L +L++G++ +
Sbjct: 121 LREVGAIPEIAN--PKDHLEIGEALRAIDTERGAKVSGSRFYFLTGVGALLQLGMLQLAI 178
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ GFTP TP +VR +E GF A +++Y +E D L+GT+E+ + H +
Sbjct: 179 QQAVEHGFTPSITPTLVRPESMEGTGFLGSHA-SEIYRLEADDLYLVGTSEVALAAYHTN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S P ++A +S C+R EAG+ G RG+ RVHQF K+EMF FC+PE++ + H+ L
Sbjct: 238 EIIDLSNGPERFAGWSTCYRREAGSHGKDVRGILRVHQFDKVEMFSFCRPEDALAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +EE++ + + + ++++
Sbjct: 298 LAMEEEMLAKVEIPYRVI 315
>gi|406593846|ref|YP_006741025.1| seryl-tRNA synthetase [Chlamydia psittaci NJ1]
gi|407455735|ref|YP_006734626.1| seryl-tRNA synthetase [Chlamydia psittaci GR9]
gi|407457151|ref|YP_006735724.1| seryl-tRNA synthetase [Chlamydia psittaci VS225]
gi|407458474|ref|YP_006736779.1| seryl-tRNA synthetase [Chlamydia psittaci WS/RT/E30]
gi|407461088|ref|YP_006738863.1| seryl-tRNA synthetase [Chlamydia psittaci WC]
gi|449071541|ref|YP_007438621.1| seryl-tRNA synthetase [Chlamydophila psittaci Mat116]
gi|405782278|gb|AFS21027.1| seryl-tRNA synthetase [Chlamydia psittaci GR9]
gi|405784412|gb|AFS23159.1| seryl-tRNA synthetase [Chlamydia psittaci VS225]
gi|405784858|gb|AFS23604.1| seryl-tRNA synthetase [Chlamydia psittaci WS/RT/E30]
gi|405787588|gb|AFS26332.1| seryl-tRNA synthetase [Chlamydia psittaci WC]
gi|405789718|gb|AFS28460.1| seryl-tRNA synthetase [Chlamydia psittaci NJ1]
gi|449040049|gb|AGE75473.1| seryl-tRNA synthetase [Chlamydophila psittaci Mat116]
Length = 426
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E A +R ++ +L+ +L+L +++ N++ + + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECEARLRKKDPLISLQPILDLDKEVRNLKTQTEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDASSLIDSVEKIAQDLANLEPLLEQKESTLQDLLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG+ F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHDILFGSGQIPK-FDGQYYRVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D ++
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYD 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLSVVEDILTELKLPYRLSLL 322
>gi|410867606|ref|YP_006982217.1| Seryl-tRNA synthetase [Propionibacterium acidipropionici ATCC 4875]
gi|410824247|gb|AFV90862.1| Seryl-tRNA synthetase [Propionibacterium acidipropionici ATCC 4875]
Length = 421
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 157/274 (57%), Gaps = 5/274 (1%)
Query: 120 LREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
LR E+ + K+ K E+ +L+ K++ + L+++ + + + + N+
Sbjct: 48 LRAEQKGLGKKI-AKASGDEKTELLARTKHIAAEVAGLKKEAEAAEERFLELDKTLGNIV 106
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
VP GGED + +TVG P F F KDH ++G+AL D + ++SGS+FY L
Sbjct: 107 IDGVPAGGEDEGEVLETVGTPRDFEAEGFTPKDHLEIGEALGAIDMERGTKISGSRFYVL 166
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE+ L+N +++ GFTP+ P +V+ S +E GF + A+ VY + DQ
Sbjct: 167 TGVGAQLEIALLNLAMTKAAGWGFTPMIPPALVKPSAMEGTGFLGQAAD-DVYYLPKDDQ 225
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L+GT+E+ + H + IL ++ LP +Y AFS CFR EAG+ G TRG++RVH F K+EM
Sbjct: 226 YLVGTSEVALAAFHSEEILDDAELPKRYVAFSPCFRREAGSYGKDTRGIFRVHWFDKVEM 285
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
FV+C PEE++ +H +L+ E + +L + +++L
Sbjct: 286 FVYCLPEEAEDWHAKLLGFEREFIEALEIPYQVL 319
>gi|329943234|ref|ZP_08292008.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10]
gi|332287813|ref|YP_004422714.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
gi|384450979|ref|YP_005663579.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
gi|384451967|ref|YP_005664565.1| seryl-tRNA synthetase [Chlamydophila psittaci 01DC11]
gi|384452941|ref|YP_005665538.1| seryl-tRNA synthetase [Chlamydophila psittaci 08DC60]
gi|384453920|ref|YP_005666516.1| seryl-tRNA synthetase [Chlamydophila psittaci C19/98]
gi|384454899|ref|YP_005667494.1| seryl-tRNA synthetase [Chlamydophila psittaci 02DC15]
gi|392377042|ref|YP_004064820.1| seryl-tRNA synthetase [Chlamydophila psittaci RD1]
gi|407454466|ref|YP_006733574.1| seryl-tRNA synthetase [Chlamydia psittaci 84/55]
gi|313848385|emb|CBY17389.1| seryl-tRNA synthetase [Chlamydophila psittaci RD1]
gi|325506521|gb|ADZ18159.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
gi|328814781|gb|EGF84771.1| seryl-tRNA synthetase [Chlamydophila psittaci Cal10]
gi|328915073|gb|AEB55906.1| seryl-tRNA synthetase [Chlamydophila psittaci 6BC]
gi|334692701|gb|AEG85920.1| seryl-tRNA synthetase [Chlamydophila psittaci C19/98]
gi|334693677|gb|AEG86895.1| seryl-tRNA synthetase [Chlamydophila psittaci 01DC11]
gi|334694656|gb|AEG87873.1| seryl-tRNA synthetase [Chlamydophila psittaci 02DC15]
gi|334695630|gb|AEG88846.1| seryl-tRNA synthetase [Chlamydophila psittaci 08DC60]
gi|405781225|gb|AFS19975.1| seryl-tRNA synthetase [Chlamydia psittaci 84/55]
Length = 426
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E A +R ++ +L+ +L+L +++ N++ + + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECEARLRKKDPLISLQPILDLDKEVRNLKTQTEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDASSLIDSVEKIAQDLANLEPLLEQKESTLQDLLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG+ F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGSLPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHDILFGSGQIPK-FDGQYYRVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D ++
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYD 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLSVVEDILTELKLPYRLSLL 322
>gi|118620021|ref|YP_908353.1| seryl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|166222751|sp|A0PX13.1|SYS_MYCUA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118572131|gb|ABL06882.1| seryl-tRNA synthetase SerS [Mycobacterium ulcerans Agy99]
Length = 419
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V + +R + L + +L D LR E+ A A+K G
Sbjct: 2 IDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L++ K+L E + E + IPN+ VP GGED +
Sbjct: 61 GASPEERPALLQRAKDLAEQVKAAEATQSETETAFTAAHMAIPNVILDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P + P KDH +LG++L + D A+V+GS+FY+L + +L++GL+ L
Sbjct: 121 LDVVGEPRALDNP-KDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF P+ P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LAVDNGFIPMIPPVLVRPEVMAGTGFLGAHAD-EVYRLEADDLYLVGTSEVPMAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L+
Sbjct: 239 IVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCAPADAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 AWQREMLAQIEVPYRVI 315
>gi|302871467|ref|YP_003840103.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302574326|gb|ADL42117.1| seryl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 420
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 177/321 (55%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL EK + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRANPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + L+ E K L + + L+ + + DE+++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTGLMNELKELSDKIKELDSKVKDVEDEIEKILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G +F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGEVREPDFIIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLRELGLPYRVVLL 320
>gi|227486613|ref|ZP_03916929.1| serine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
gi|227235431|gb|EEI85446.1| serine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
Length = 429
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 179/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K +R+N + V NI+ + + L LV LEL EK+ + + E DRLR ERN + ++
Sbjct: 2 IDIKLLRENPDFVKENIKKKFQDEKLVLVDEVLELDEKLRSYKTEGDRLRSERNKTSKEI 61
Query: 132 -----KGKLEPSERQK--LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK E +E+ K ++E + + LV +EE+ +L +E+++ Q IP + VP
Sbjct: 62 GALMGQGKKEEAEKVKAHVVE----INDELVHIEEETARLNEEVKKRMQVIPQIIDETVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F V H + ++ D D D++ SG+ FYYLK + L
Sbjct: 118 LGKDDTENVEIERFGEPVVPDFEVPYHIDIMESFDGIDLDSSRNTSGAGFYYLKGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
++++ +I RG+T P ++RS VV +Y IEG D LIGT+E
Sbjct: 178 HSAILSYARDFMIDRGYTYFVPPFMIRSEVVTGV-MSFAEMQDMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +++I E +PLK ++S CFR E GA G RG+YR+HQF K EM + C+PE
Sbjct: 237 HSMIGKFINTINEEEKMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S + EL + + + SL + + L
Sbjct: 297 DSKKLYNELWQNTVEFFRSLEIPVRTL 323
>gi|336260882|ref|XP_003345233.1| hypothetical protein SMAC_09365 [Sordaria macrospora k-hell]
gi|380088483|emb|CCC13638.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 539
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 202/409 (49%), Gaps = 56/409 (13%)
Query: 20 FRPVTKTLGLISRRNHSQKPPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKW 79
RP+T+T + S N S RL + + +A ++ +A KP +D K
Sbjct: 25 LRPLTQTPRIASLHNTS-----RLTSDSLAA---------SSRPSIAPKP----VVDIKH 66
Query: 80 IRDNKEAVSANIRNRNSNANL---ELVLELYEKMLNVQKEVDRLREERNAV--------- 127
IR N + + N RN + + + +L+ + Q+E LRE N +
Sbjct: 67 IRQNPDLYAQNCIERNYHQQATYPQRINDLHAQWQAKQREARSLRERSNILRRQLTDPGS 126
Query: 128 -----ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
A+ + + R +LI E + LK L T+E + ++ E++ A IPN+T +
Sbjct: 127 IRDENADTIAAGTQLLTRDELIAEARKLKALLSTIEAEETRILSEIESLALSIPNLTSDE 186
Query: 183 VPVGGED--CSIIRKTVGN-PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
P G E S+I + PS + + H +G L + DF +A SG +Y+L +E
Sbjct: 187 SPRGPEPQVLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGWGWYFLLDE 246
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI-EGADQ 296
A LE LI + L ++ G+ ++ P IV S V CGFQPR N TQ+YS+ + AD
Sbjct: 247 AAQLEQALIGYALDLAVRSGWRQVSPPSIVYSHVASACGFQPRDQNGETQIYSLSQSADD 306
Query: 297 C--------LIGTAEIPVGGIHMDSIL-----SESLLPLKYAAFSHCFRTEAGAAGTATR 343
+ GT+EIP+ G+H + L PLKY A S C+R EAG+ G T+
Sbjct: 307 AARGKPELSMAGTSEIPLAGMHANKTLLCPGDISEFSPLKYVAVSRCYRAEAGSRGLETK 366
Query: 344 GLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+E+F + P + + E++ ++ DL SSLGLH ++L
Sbjct: 367 GLYRVHEFTKVELFGWTYPSLDSASEIFNEIVDLQTDLLSSLGLHCRVL 415
>gi|429243238|ref|NP_594466.2| mitochondrial serine-tRNA ligase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|391358159|sp|Q9UTB2.2|SYSM_SCHPO RecName: Full=Serine--tRNA ligase, mitochondrial; AltName:
Full=Seryl-tRNA synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase; Flags: Precursor
gi|347834190|emb|CAB61772.2| mitochondrial serine-tRNA ligase (predicted) [Schizosaccharomyces
pombe]
Length = 479
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 180/341 (52%), Gaps = 24/341 (7%)
Query: 67 VKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREE--- 123
++ W+A +++K+I N EAV N NRN L+ + E K+ ++ E + L+ E
Sbjct: 42 LRSSWQAILNYKYIYQNAEAVQRNCINRN----LQAIAETVPKIRSLIDEKESLKNEFFP 97
Query: 124 ----RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
+ + +++ +P+ER KL+ E K LK+ + + K+T++L Q +PN T
Sbjct: 98 LLSLKKEITLQIERCSDPNERGKLVNEAKGLKKKTEEYNKIISKVTNDLYQYCLAVPNTT 157
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNF-PVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKN 238
P VPVG ED +++ + +G+P V +KDH Q+ A + + + AA+ SG F Y
Sbjct: 158 LPTVPVGPEDKAVVVQKIGSPLVKKTGSLKDHLQI--ANEGINLEDAAQASGHSFCYTTG 215
Query: 239 EAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRG-ANTQVYSIE----- 292
+ +LEM + N+ + I +G+ P+ P IVR+ + CGFQPR Q+Y ++
Sbjct: 216 DIALLEMAITNYAMDFAISKGWCPVIPPTIVRTDIALACGFQPRDEEGQQIYELDSYTSP 275
Query: 293 ---GADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVH 349
QCLIGTAEI + + + + K S +R EAGA G RGLYR+H
Sbjct: 276 LVSSPKQCLIGTAEISLAALGFKKTFN-NFTERKVVGVSRAYRREAGARGKENRGLYRLH 334
Query: 350 QFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+F+K+E+F + P S E++ +++ +L + ++L
Sbjct: 335 EFTKVELFAWTHPSRSSEMFNEIVNFQKEFVETLKIPARIL 375
>gi|183985354|ref|YP_001853645.1| seryl-tRNA synthetase [Mycobacterium marinum M]
gi|238690931|sp|B2HMM1.1|SYS_MYCMM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183178680|gb|ACC43790.1| seryl-tRNA synthetase SerS [Mycobacterium marinum M]
Length = 419
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 174/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V + +R + L + +L D LR E+ A A+K G
Sbjct: 2 IDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKA-ASKGVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L++ K+L E + E + IPN+ VP GGED +
Sbjct: 61 GASPEERPALLQRAKDLAEQVKAAEATQSETEAAFTAAHMAIPNVILDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P + P KDH +LG++L + D A+V+GS+FY+L + +L++GL+ L
Sbjct: 121 LEVVGEPRAIDNP-KDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF P+ P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LAVDNGFIPMIPPVLVRPEVMAGTGFLGAHAD-EVYRLEADDLYLVGTSEVPMAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L+
Sbjct: 239 IVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 AWQREMLAQIEVPYRVI 315
>gi|294795199|ref|ZP_06760333.1| serine--tRNA ligase [Veillonella sp. 3_1_44]
gi|294453991|gb|EFG22366.1| serine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 426
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 179/321 (55%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N + V N+ NR++ +L+ + Y++ + V+ L+ RN+V +K+
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDC 190
K E ++ + I E K + + + + + ++ +L+ A +PNM VPVG ED
Sbjct: 62 KRNKENADEK--IAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADEDE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ ++ G P FNF V+ H+ LG++LDI DF+ A ++SG++F K LE LIN+
Sbjct: 120 NVEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ V K G+T + TP +V + G P+ A +Y +EG + LI TAE+ +
Sbjct: 180 MVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEGTEYFLIPTAEVTLTNY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H I SE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S
Sbjct: 239 HGGEIFSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E L E++ L L F+++
Sbjct: 299 ETLTDNAEEVLRLLELPFRVI 319
>gi|291547583|emb|CBL20691.1| seryl-tRNA synthetase [Ruminococcus sp. SR1/5]
Length = 431
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 183/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ ++ LELV LEL ++ +++EV+ LR ERN ++ ++
Sbjct: 2 LDIKFVRENPEVVKQNIRNKFQDSKLELVDKVLELDKENREIKQEVEALRAERNKISKQI 61
Query: 132 -----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK E +E ++++ G ++E L + ++ +EL ++ IPN+ P VP
Sbjct: 62 GALMGQGKREEAEEVKKQVAASGTRIEE----LSQREKEVEEELLKDMMVIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F V H + + D D D+A V+G+ FYYL + L
Sbjct: 118 IGKDDSQNVEIEKFGEPVVPDFEVPYHTDIMENFDGIDLDSARRVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + ++L + DL+ SL + + L
Sbjct: 297 ESKMWFDKLWQNTVDLFRSLDIPVRTL 323
>gi|255545804|ref|XP_002513962.1| L-ascorbate peroxidase, putative [Ricinus communis]
gi|223547048|gb|EEF48545.1| L-ascorbate peroxidase, putative [Ricinus communis]
Length = 388
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%), Gaps = 1/129 (0%)
Query: 44 LARAFSAPALQTIDTTDNKGGVAVK-PQWKAAIDFKWIRDNKEAVSANIRNRNSNANLEL 102
LA+ +S P L + + + + PQWKAAIDFKW RDNKE V+ NI+NR SNANLEL
Sbjct: 3 LAKPWSDPELVRLICEEKRTMRGAELPQWKAAIDFKWTRDNKEEVALNIKNRISNANLEL 62
Query: 103 VLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLV 162
VLELYEKML VQKEV+RLR ERNAVANKMKGKLEPSERQKLI EGKNLKEGL+TLEED++
Sbjct: 63 VLELYEKMLAVQKEVERLRGERNAVANKMKGKLEPSERQKLINEGKNLKEGLMTLEEDML 122
Query: 163 KLTDELQQE 171
KLTDELQQE
Sbjct: 123 KLTDELQQE 131
>gi|266624055|ref|ZP_06116990.1| serine--tRNA ligase [Clostridium hathewayi DSM 13479]
gi|288864123|gb|EFC96421.1| serine--tRNA ligase [Clostridium hathewayi DSM 13479]
Length = 431
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N EAV NIRN+ ++ L LV +EL E ++E D LR ERN ++ ++
Sbjct: 2 LDLKFVRENPEAVKQNIRNKFQDSKLPLVDEVIELDELNRAAKQEGDALRAERNKLSKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + ++++ E K + + L LEE +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMGQGKKEEAEELKKQVTAASDHLAELEEKERELDEKIKKIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H + + D D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQRYGEPVVPDFEVPYHTDIMERFDGIDLDSARKVAGNGFYYLMGDIARLHSSV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTIIPEESLPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESME 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 301 WYDKLWQNTVDLFRSLDIPVRTL 323
>gi|294786719|ref|ZP_06751973.1| serine--tRNA ligase [Parascardovia denticolens F0305]
gi|315226335|ref|ZP_07868123.1| serine--tRNA ligase [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485552|gb|EFG33186.1| serine--tRNA ligase [Parascardovia denticolens F0305]
gi|315120467|gb|EFT83599.1| serine--tRNA ligase [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 428
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 181/332 (54%), Gaps = 29/332 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN----- 129
+D ++IR+N E V + R R +A+L +++L + DRLR R+A+A+
Sbjct: 2 LDIQFIRENPEVVKESQRKRGESADL------VDQVL----QADRLR--RDALADFESTR 49
Query: 130 ---KMKGKL----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
K GK ER +I + K L + +E K T++ + N+ P+
Sbjct: 50 AEQKKMGKAVAAASAEERPAIIAQTKELAAKVSEYKETADKATEDYTTAMWKLSNIVEPE 109
Query: 183 VPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
P GGED ++ K VG F F K+H +LG+ + D +VSGS+FY+L+
Sbjct: 110 APEGGEDDYVVVKKVGQIRDFAAEGFEPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGA 169
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-QCL 298
LE+ ++ + + + GF TTP +VR ++ GF A ++Y + D Q L
Sbjct: 170 IARLELAMLTMGVDQAERNGFIMATTPTLVRPEIMAGTGFLNSHAE-EIYRLREPDEQYL 228
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
+GT+E+ + G+H D IL S PLKYA +S C+R EAGAAG T G+ RVHQF+K+EMFV
Sbjct: 229 VGTSEVALAGMHEDEILDLSHGPLKYAGWSSCYRREAGAAGKDTMGIIRVHQFNKVEMFV 288
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+C+ EES H++L+ +E+++ + + ++++
Sbjct: 289 YCKQEESYEQHQKLLAMEQEMLGKVEVPYRII 320
>gi|256545460|ref|ZP_05472822.1| serine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
gi|256398856|gb|EEU12471.1| serine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
Length = 429
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANK- 130
+D K++R+N + V NI+ + + L LV ++L EK+ +V+ E D LR +RN + +
Sbjct: 2 LDIKFVRENPDFVKENIKKKFQDEKLVLVDEVIKLDEKLRDVKTEGDNLRAKRNKTSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E +K+ EE ++ + LV +EED K D+L+++ Q IP + VP+G +
Sbjct: 62 GALMGQGKKDEAEKVKEEVSDINDRLVQIEEDTRKFQDQLKEKMQVIPQIIDDSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G +F V H + ++ + D D+A + SG+ FYYLK + L +
Sbjct: 122 DSENVEIERFGENVTPDFEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I +G+ P ++RS VV +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDKGYEYHIPPFMIRSDVVTGV-MSFAEMEDMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G ++SI E+ +PL+ ++S CFR E GA G RG+YR+HQF K EM + C+PE+S
Sbjct: 241 GKFINSITDENEMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSKK 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+++EL + + + SL + + L
Sbjct: 301 FYDELWKNTVEFFRSLEIPVRTL 323
>gi|120406601|ref|YP_956430.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|166222752|sp|A1TGX4.1|SYS_MYCVP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|119959419|gb|ABM16424.1| seryl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 419
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +R+N +AV A+ R + L L + D LR E+ + A+++ G
Sbjct: 2 IDLKVLRENPDAVRASQLARGEDPGLVDALADADTARRAAISAADNLRAEQKS-ASRLVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L + + E + I N+ VP GGED ++
Sbjct: 61 KASPEERPALLAAAKELADKVRAAESAQAEAEKAYSAAHMAISNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P+ P KDH +LG++L + D + A+VSGS+FY+L +L++GL +
Sbjct: 121 LDTVGEPTALTDP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGFGALLQLGLFQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 TATENGFTLVIPPVLVRPEIMSGTGFLGAHAD-EVYRVEADDLYLVGTSEVPLAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ H+ L+
Sbjct: 239 ILDLSEGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEHDRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ + + + ++++
Sbjct: 299 GWQRQMLGLIEVPYRVI 315
>gi|212224239|ref|YP_002307475.1| seryl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229470724|sp|B6YWW5.1|SYS_THEON RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|212009196|gb|ACJ16578.1| Seryl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 457
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 192/344 (55%), Gaps = 32/344 (9%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N + V ++ R ++ + LEL +K +++++LR+ERN +A
Sbjct: 2 LDIKLIRENPDLVKGDLIKRGEIEKIKWIDEILELDKKWRENLRKINQLRKERNQLAVQI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K K EP + L+ + + + + TLE+++ +L ++ +PN+TH VP+G +
Sbjct: 62 GKRKKAGEPID--DLLAKSNEIVKQIETLEKEVEELRAKIDYYLWRLPNITHESVPIGKD 119
Query: 189 DCSII-------------------RKTVG--NPSVFNFPVKDHFQLGKALDIFDFDAAAE 227
D + +++G + V ++ + H + + L D + AA+
Sbjct: 120 DSENVPIRFWGKAKVWEGFLETFKEQSLGKMDYEVIDWRPRLHVDMLEILRGADIERAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+FYYL NE V+L++ LI + L ++I++GF P+ P +VR V E G G
Sbjct: 180 VSGSRFYYLLNELVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEE--GVTSFGDFED 237
Query: 288 V-YSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLY 346
V Y +EG D LI TAE P+ G+H + IL LPL Y S CFR EAG AG T+G++
Sbjct: 238 VIYKVEGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKDTKGIF 297
Query: 347 RVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
RVHQF K+E FV+ +PEES +HE+LI+ E+++ L + ++++
Sbjct: 298 RVHQFHKVEQFVYSRPEESWEWHEKLIQNAEEIFQELEIPYRVV 341
>gi|396583849|ref|ZP_10484359.1| serine--tRNA ligase [Actinomyces sp. ICM47]
gi|395548580|gb|EJG15815.1| serine--tRNA ligase [Actinomyces sp. ICM47]
Length = 425
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +R+N E A+ R R +N L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRENPEPARASQRARGANPGLVDEIIAADAARREALQAFETLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E E + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILAKAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGV 110
Query: 184 PVGGEDCSIIRKTVG-NPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGED ++ + G P F F +DH LG+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEDDFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ ++ + + + GF P+ TP +V ++ GF ++ ++Y + D L
Sbjct: 171 GARLELAIMTMAMDQALANGFVPMMTPTLVTPQIMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSAGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE++ H+ + EE++ + + L ++++
Sbjct: 290 CRPEDAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|440785146|ref|ZP_20962096.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440785152|ref|ZP_20962102.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218518|gb|ELP57738.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218524|gb|ELP57744.1| seryl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 426
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 182/323 (56%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR N E + + NR + A+++ V+EL EK + EV+ + +RN + ++
Sbjct: 2 LDLKRIRTNPEEIKKLLTNRGEDFDLADIDKVVELDEKRRKILVEVENFKGKRNKESAEI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GE 188
K K L+ + K L E + TL+ ++VK+ +EL+ IPN+ H VP G E
Sbjct: 62 AKLKRAGENADNLVADMKKLSEEIKTLDAEVVKVDEELEYIMMRIPNIPHESVPEGKSDE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D IRK G P F+F +K H+ +GK LDI DF+ A +V+GS+F + K LE +I
Sbjct: 122 DNVEIRKW-GEPRKFDFELKAHWDIGKDLDILDFERAGKVAGSRFTFYKGLGARLERSII 180
Query: 249 NWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
++ L + V K G+T + P +V + + G P+ + +E LI TAE+PV
Sbjct: 181 SYFLDTHVEKHGYTEILPPYMVNRNSMTGTGQLPK-FEEDAFKVENNGFFLIPTAEVPVT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ D L LP+K+AA+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 240 NLFRDETLKGEELPIKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFAKPEQSYE 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L E++ LGL ++++
Sbjct: 300 ELEKLTADAEEVLQILGLPYRVI 322
>gi|384449963|ref|YP_005662565.1| seryl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
gi|269302656|gb|ACZ32756.1| seryl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
Length = 427
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 176/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ +LE VL L +++ ++ + + L+ +R ++ + K
Sbjct: 2 LDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + LI+E + L L +E+ L + +L + +PN D+PV + +
Sbjct: 62 KTQGVDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNYPADDIPVSEDKAGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+VG+ F+FP K H +L + LDI DF AAA+ +GS + KN V+LE L+ + L
Sbjct: 122 VIKSVGDLPTFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
+ GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G
Sbjct: 182 QKQAAHGFQLWLPPLLVKKEILFGSGQIPK-FDGQYYRVEDGEQYLYLIPTAEVVLNGFR 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+E LPL YAA + CFR EAGAAG RGL RVHQF K+EMF F P + D +E
Sbjct: 241 SQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ I E++ + L L ++L L
Sbjct: 301 KMLSIVEEMLTELKLPYRLSLL 322
>gi|219666079|ref|YP_002456514.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|254783022|sp|B8FXX3.1|SYS_DESHD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219536339|gb|ACL18078.1| seryl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 421
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 176/318 (55%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E V ++ RNSN +L+ LE E+ + EV+ L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAQRNTVSEEVGRR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K + ++LI E + + + + LE+ L ++ ++ IPN+ H VPVG E+ ++
Sbjct: 62 KKHGEDAEQLILEMREVGQKVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEEANV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F+F H+++G+ LDI DF A +V+G++F + K LE LI++ L
Sbjct: 122 EVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALISFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+ + P +V + + G P+ + + G D LI TAE+PV ++ +
Sbjct: 182 DRHSAKGYVEVLPPYMVHRNSMIGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYRE 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F PE S E L
Sbjct: 241 EILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 301 TRDAESILQELELPYRVM 318
>gi|408418050|ref|YP_006759464.1| seryl-tRNA synthetase SerC [Desulfobacula toluolica Tol2]
gi|405105263|emb|CCK78760.1| SerC: seryl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 429
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 183/319 (57%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++++N E V ++ RN+ N +LE +K + E+++LR +RN V++++ K
Sbjct: 2 LDLKYVKNNLEIVKNGMKKRNAKLNFASLLENDDKRKALLLEIEKLRHKRNVVSDEIAKI 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + LI+E +++ E + L+++L + + + IPN+ H DVP+G +D +
Sbjct: 62 KKSGHDAGPLIKEMRDVSETIKKLDKELSTIKALINEFLISIPNIPHEDVPMGKDDTQNR 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ KT G P F+F +K H+++G+ L I DF AA+++G++F + LE LIN+ L
Sbjct: 122 LEKTQGQPKQFDFKIKPHWEIGENLGILDFTRAAKLTGARFPLYIGKGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ G+T P IV + + G P+ ++ IEG D LI T+E+P+ I+
Sbjct: 182 DIHTSQHGYTEALPPFIVNKTTMTGTGQLPK-FEEDLFKIEGLDYYLIPTSEVPITNIYS 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL ES+LP K+ A++ CFR+EAG+ G T+GL R HQF+K+EM PE S +
Sbjct: 241 NEILDESMLPCKFTAYTPCFRSEAGSYGRDTKGLIRQHQFNKVEMVKLTTPETSFDELQS 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + L L ++++
Sbjct: 301 LLANAEKILQLLELPYQVV 319
>gi|329121075|ref|ZP_08249706.1| serine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327471237|gb|EGF16691.1| serine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 434
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 175/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-G 133
+D K+IR+N + V N+ NRN+N +L VLEL K + +E ++L+ RN + +
Sbjct: 2 LDLKFIRENFDLVKENLINRNNNFDLNKVLELDRKRRELLQETEKLKSRRNIESKNIAIA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
K + + I E + + + ++ DL K+ EL IPN+ VPVG +D
Sbjct: 62 KKKGEDASAAIAEMRKVGNQISEIDIDLNKIEKELHNLLLHIPNIVDESVPVGKDDSENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+FP+K H++LG++L + DF+ A +VSG++F + + LE + N+
Sbjct: 122 EIRRW-GVPRKFDFPIKAHYELGESLKMLDFERAGKVSGARFTFYIDAIAKLERAVYNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ FT + P I+ S ++ G P+ A +Y +EG + TAE+P+
Sbjct: 181 LDLHTVEGTFTEVIPPYIINESSMQGTGQLPKFAE-DMYKVEGETMYMTPTAEVPLTNYF 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL S+LP+ + A + CFR EAG+AG TRGL R HQF K+EM +C+PE+S E
Sbjct: 240 AGEILDASILPVHFTALTPCFRKEAGSAGKDTRGLIRQHQFQKVEMVKYCKPEDSKDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L E + L L ++++
Sbjct: 300 SLTNEAEKVLQELNLPYRVV 319
>gi|257437753|ref|ZP_05613508.1| serine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
gi|257199768|gb|EEU98052.1| serine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
Length = 443
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 178/334 (53%), Gaps = 19/334 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ---KEVDRLREERNAVAN-- 129
+D K++RDN +AV NI+ + +A L LV E+ EK + KEV+ L+ RN ++
Sbjct: 2 LDIKFVRDNPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRECLKEVESLKAARNKLSKAN 61
Query: 130 --------KMKGKLEPSERQKLIEEG----KNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
K + + ++ Q I+ K + + LE + KL D +Q+ IP
Sbjct: 62 GPLFGQLKKCTDEAQKAQLQAQIDANNAAVKADADKMAELEAEEAKLADRIQEIMYTIPQ 121
Query: 178 MTHPDVPVGGEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
M P VP+G +D ++ + G P V +FP+ H ++ ++ D D DAA V+G+ FYYL
Sbjct: 122 MIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYYL 181
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
L ++ + +I +GFT + P ++ +VV+ P + +Y IEG D
Sbjct: 182 LGNIARLHEAVLAYARDFMIDKGFTYVIPPFMMHGNVVQGVMSFPE-MDAMMYKIEGEDL 240
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LIGT+E + G +D L E+ LPL ++S CFR E GA G RG+YR+HQF K EM
Sbjct: 241 YLIGTSEHTMIGRFIDQTLDEATLPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEM 300
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V C+PEES ++E+L + +L+ S+ + + L
Sbjct: 301 IVVCRPEESADWYEKLWKNSVELFRSMEIPVRQL 334
>gi|406932875|gb|EKD67705.1| hypothetical protein ACD_48C00256G0002 [uncultured bacterium]
Length = 414
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 183/319 (57%), Gaps = 12/319 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +I++N E N+N + E ++ L E + K VD LR +RN ++ K
Sbjct: 2 LDINFIKENLELCKTAAINKNRTVDWERLVTLDETRRKLTKSVDDLRAQRNEISKK---- 57
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
P E ++ EGK +KE L LEE+L K+ +ELQ +PN+ VP+G + +
Sbjct: 58 --PIEIARV--EGKQIKESLKGLEEELKKVEEELQVVLFTVPNVPDKSVPIGKDASGNVE 113
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ VF++ +DH +L K D+ DF+ A+V G + Y+ KNEAV+LEMGL+ +T+
Sbjct: 114 VRKWGDLPVFDYTPRDHIELAKINDLVDFERGAKVGGFRTYFTKNEAVLLEMGLLFYTMQ 173
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+++K+G+TPL P +++ + P G + +VY +E D L GTAE PV D
Sbjct: 174 KLVKKGYTPLIAPSLLKEFTLFGIAQFPWGRD-EVYHLEKDDVYLAGTAEQPVTAYLSDE 232
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH--EE 371
IL E LP K+ AFS CFR E+G+ G T+G+YRVHQF+K+E + + + S S EE
Sbjct: 233 ILVEKDLPKKFVAFSPCFRRESGSYGKDTKGIYRVHQFNKIEQVIISKNDMSISLTLLEE 292
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E++ L L +++L
Sbjct: 293 LLANSEEILQDLKLPYRIL 311
>gi|402304219|ref|ZP_10823294.1| serine--tRNA ligase [Selenomonas sp. FOBRC9]
gi|400375292|gb|EJP28198.1| serine--tRNA ligase [Selenomonas sp. FOBRC9]
Length = 423
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N +AV ++NR + +L L E+ + ++V+ + RNAV+ ++ +
Sbjct: 2 LDMKFVRENLDAVHEMLKNRCNGLDLSPFTALDEERRRILQDVEEKKARRNAVSKEIGVR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDL----VKLTDELQQEAQCIPNMTHPDVPVGGED 189
+ E + ++ E + L + + L+EDL +KL D L Q IPNM DVPVG ++
Sbjct: 62 KKAGEAAEDVVAEMRTLGDEIAALDEDLRDVELKLRDLLLQ----IPNMPKADVPVGKDE 117
Query: 190 CSI--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+R+T G P VF+F K H+ +G+ L I D + AA+V+G++F + K LE
Sbjct: 118 TENPEVRRT-GTPRVFDFEPKAHWDIGEQLGILDAERAAKVTGARFTFYKGLGARLERAC 176
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ + K G+T + P IV S + G P+ A ++ +EG D L+ TAE+P
Sbjct: 177 INFMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPT 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL + LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S
Sbjct: 236 TNYHRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSW 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E ++ ED+ +L L ++++
Sbjct: 296 DELESMVEAAEDVLRTLELPYRVI 319
>gi|399524700|ref|ZP_10765220.1| serine--tRNA ligase [Atopobium sp. ICM58]
gi|398374023|gb|EJN51788.1| serine--tRNA ligase [Atopobium sp. ICM58]
Length = 425
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +RDN E A+ R R ++ L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRDNPEPARASQRARGADPGLVDEIIEADAARREALQSFETLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E E + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILTKAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGV 110
Query: 184 PVGGEDCSIIRKTVG-NPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGED ++ + G P F F +DH LG+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEDDFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ ++ + + + GF P+ TP +V ++ GF ++ ++Y + D L
Sbjct: 171 GARLELAIMTMAMDQALANGFVPMMTPTLVTPQIMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSAGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE++ H+ + EE++ + + L ++++
Sbjct: 290 CRPEDAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|313896743|ref|ZP_07830291.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974660|gb|EFR40127.1| serine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 423
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N +AV ++NR + +L L E+ + ++V+ + RNAV+ ++ +
Sbjct: 2 LDMKFVRENLDAVREMLKNRCNGLDLSPFTALDEERRRILQDVEEKKARRNAVSKEIGVR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDL----VKLTDELQQEAQCIPNMTHPDVPVGGED 189
+ E + ++ E + L + + L+EDL +KL D L Q IPNM DVPVG ++
Sbjct: 62 KKAGEAAEDVVAEMRTLGDEIAALDEDLRDVELKLRDLLLQ----IPNMPKADVPVGRDE 117
Query: 190 CSI--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+R+T G P VF+F K H+ +G+ L I D + AA+V+G++F + K LE
Sbjct: 118 TENPEVRRT-GTPRVFDFEPKAHWDIGEQLGILDAERAAKVTGARFTFYKGLGARLERAC 176
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ + K G+T + P IV S + G P+ A ++ +EG D L+ TAE+P
Sbjct: 177 INFMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPT 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL + LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S
Sbjct: 236 TNYHRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSW 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E ++ ED+ +L L ++++
Sbjct: 296 DELESMVEAAEDVLRTLELPYRVI 319
>gi|386866629|ref|YP_006279623.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385700712|gb|AFI62660.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 428
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ E V + R R + L + VL E+ + K+ + R + + ++
Sbjct: 2 LDIQFIREHPEVVKESQRKRGESVELVDEVLRADEERRSSLKQFEEARARQKEIGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P E+ KLI + K L E + + + ++ + N+ P P GGED ++
Sbjct: 61 KAAPDEKAKLIAQTKELSEQVASFKASADTADEQYTTAMWQLSNIVEPQAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG F F KDH LG+ + D +VSGS+FY+L+ + L++ ++
Sbjct: 121 VKKVGQIRDFAAEGFEPKDHLTLGEEVAGIDMKRGVKVSGSRFYFLRGDVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GF TP +VR V+ GF A+ ++Y + E D L+GT+E+ + G+
Sbjct: 181 AVDQAQEHGFILAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDDYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + IL S PL+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+ +PE SD+ H
Sbjct: 240 HENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKPENSDAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +EE++ + + + ++++
Sbjct: 300 QKLLAMEEEMLAKVEVPYRVI 320
>gi|156042898|ref|XP_001588006.1| hypothetical protein SS1G_11248 [Sclerotinia sclerotiorum 1980]
gi|154695633|gb|EDN95371.1| hypothetical protein SS1G_11248 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 506
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 179/356 (50%), Gaps = 42/356 (11%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAV- 127
K +ID K IR + E + RN ++ L+EK Q++ LRE N +
Sbjct: 44 KQSIDIKHIRTHPELYEKSCIERNYKLQSTYPAKIISLFEKWHEHQRDGRALRERNNKLK 103
Query: 128 ---ANKMKGKLEPSE---------RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
AN + + SE ++++I E ++LK+ + +E L E+ A I
Sbjct: 104 LQLANPKSLRNDDSEEAQSLRALSKEEIIAEARSLKDKISQIESSETALMTEINTLASAI 163
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGN--------PSVFNFPVKDHFQLGKALDIFDFDAAAE 227
PN+T P G E K +G PS + + H +G L++ DF +AA
Sbjct: 164 PNLTSDSTPRGSEP-----KVIGTINEHPEPVPSSSDRVWRSHVHIGSELNLLDFSSAAT 218
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR--GAN 285
SG +YYL N A +LE LI ++LS + + ++ ++ P ++ S + CGFQPR
Sbjct: 219 TSGWGWYYLLNGAALLEQALIQYSLSLALSKKWSIVSPPTMIYSHIASACGFQPRDQSGE 278
Query: 286 TQVYSIEGADQ---------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAG 336
Q+YSI L GTAEIP+ G+ DS + ES LPLK A S C+R EAG
Sbjct: 279 QQIYSIAQTPSDTESGKPTYSLAGTAEIPLAGMKADSTIHESQLPLKTIATSRCYRAEAG 338
Query: 337 AAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
A G T+GLYRVH+F+K+EMF + P E + E++ ++ ++ +SL LH ++L
Sbjct: 339 ARGIDTKGLYRVHEFTKVEMFAWTLPTLESTTEIFNEMLSLQIEILTSLNLHCRIL 394
>gi|432892309|ref|XP_004075757.1| PREDICTED: serine--tRNA ligase, mitochondrial-like [Oryzias
latipes]
Length = 517
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 182/334 (54%), Gaps = 17/334 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D + + + V AN+ NR + +++ ++ +++++L+V+KE+ L+EE+ ++
Sbjct: 58 KPELDMREVCEETHKVIANVENRKGDLRGSDVRKIVCVWQELLSVRKEIFELQEEKRLIS 117
Query: 129 NKMK------GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
++ G E + Q L + G+ ++ L L +L +E A +PN THPD
Sbjct: 118 ETVRTLVVRLGSSEEPQHQAL-QRGRQIRSRLSELTLRESQLDEEHYSRALRLPNSTHPD 176
Query: 183 VPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
VPVG E + + + VG F+F + H +LG+ L + + VSG + YYL+
Sbjct: 177 VPVGDESQARVMELVGQKPEFDFQPRGHVELGETLGLIRQRHLSHVSGHRSYYLRGAGAR 236
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLI 299
L+ L N+ L + +RGF P+ P++++ +V E CG QP +QVYS++ D L
Sbjct: 237 LQTALQNFALDTLQRRGFIPMVVPDMLKGAVFEGCGMQPNAHRSQVYSLDPTCFPDLNLA 296
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT E+ V G MD ++ LP++ S C+R E G T GLYRVH F+K+EMF
Sbjct: 297 GTGEVGVAGFFMDHAVNWKDLPVRTVCSSTCYRAETD-TGRETWGLYRVHHFNKVEMFGV 355
Query: 360 CQPE---ESDSYHEELIRIEEDLYSSLGLHFKLL 390
E ES +E + ++++++S+L LHF++L
Sbjct: 356 TADETGQESAELLQEFVSLQKEIFSALELHFRVL 389
>gi|364284959|gb|AEW47955.1| GHF95 protein [uncultured bacterium D2_11]
Length = 423
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 3/320 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D IR + V ++ NRN LE +L L K + K+ ++LR RN V+ ++
Sbjct: 2 LDINLIRTQPDVVRQSLINRNEETGALEGILTLDVKRREILKQSEQLRATRNTVSKEIGK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ R+ I E + + + + LE DL ++ +L + +PN+ P +PVG ED ++
Sbjct: 62 MKDAVSREAKIAEMRGVGDQITALEVDLKQVEAQLDELVMALPNIPDPRIPVGPTEDDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ +T G F+F VK H++LG AL I DF+ ++SG++FY L + L+ LI W L
Sbjct: 122 VLRTEGELPHFDFTVKPHWELGPALGILDFERGVKLSGTRFYVLNGQGARLQRALIAWML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++G+ P +V+ + G P+ + +Y D ++ TAE+P+ +H
Sbjct: 182 DLHTQQGYREEYLPFMVKQQTLYAAGQLPK-FKSNLYHDAEEDYWMVPTAEVPLTNLHGG 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILS LPL Y A++ CFR E AG+ RG+ R HQF K+EM+ FC PE SD E++
Sbjct: 241 EILSAEQLPLHYCAYTPCFRREKMKAGSDVRGIKRGHQFDKVEMYKFCLPENSDDELEKM 300
Query: 373 IRIEEDLYSSLGLHFKLLLF 392
E + LGL +++ L
Sbjct: 301 REDAEAVLKGLGLTYRVKLL 320
>gi|160939797|ref|ZP_02087144.1| hypothetical protein CLOBOL_04688 [Clostridium bolteae ATCC
BAA-613]
gi|158437231|gb|EDP14996.1| hypothetical protein CLOBOL_04688 [Clostridium bolteae ATCC
BAA-613]
Length = 429
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANK- 130
+D +++R+N + V NI+N+ ++ L LV + L + QKE D LR RN ++ +
Sbjct: 2 LDLRFVRENPDIVKQNIKNKFQDSKLPLVDEVISLDTEARATQKEADDLRASRNKLSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E + + +E L LEE +L++++ + IPN+ P VP+G +
Sbjct: 62 GMLMGQGKKDEAEAVKQEVSANSARLAELEEKEGQLSEKITKIMMTIPNIIDPTVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G+P V +F + H + + + D DAA V+G+ FYYL + L +
Sbjct: 122 DSENVEVERFGDPVVPDFEIPYHTDIMERFNGIDLDAARRVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E LPL ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTITPEQQLPLTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++E+L + DL+ SL + + L
Sbjct: 301 WYEKLWQNTVDLFRSLDVPVRTL 323
>gi|423075889|ref|ZP_17064603.1| serine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361853117|gb|EHL05303.1| serine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 431
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 176/318 (55%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E V ++ RNSN +L+ LE E+ + EV+ L+ +RN V+ ++ +
Sbjct: 12 LDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAKRNTVSEEVGRR 71
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K + ++LI E + + + + LE+ L ++ ++ IPN+ H VPVG E+ ++
Sbjct: 72 KKHGEDAEQLILEMREVGQKVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEEANV 131
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F+F H+++G+ LDI DF A +V+G++F + K LE LI++ L
Sbjct: 132 EVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALISFML 191
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+ + P +V + + G P+ + + G D LI TAE+PV ++ +
Sbjct: 192 DRHSAKGYVEVLPPYMVHRNSMIGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYRE 250
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F PE S E L
Sbjct: 251 EILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESL 310
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 311 TRDAESILQELELPYRVM 328
>gi|311742239|ref|ZP_07716049.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272]
gi|311314732|gb|EFQ84639.1| serine--tRNA ligase [Aeromicrobium marinum DSM 15272]
Length = 426
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 36/335 (10%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-----------SNANLELVLELYEKMLNVQKEVDR---- 119
ID + +RD+ +AV +R R ++A+ + +E + + QK++ +
Sbjct: 2 IDPRLVRDDPDAVREALRRRGESSDVVDALIAADADRRGSIAAFEAVRSEQKQIGKQVAR 61
Query: 120 -LREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
+E+ A+ + K E ++E + VT +DL++ +PN+
Sbjct: 62 ATGDEKTALLARTK------ELSARVKEADAEQGAAVTRFDDLLR----------SLPNL 105
Query: 179 THPDVPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
P+ P GGED ++ VG P F F +DH +LG+ L D + A+VSGS+FYY
Sbjct: 106 VAPEAPEGGEDDFVVLDVVGTPRDFEAEGFTPRDHLELGELLGAIDVERGAKVSGSRFYY 165
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
L LE+ L+ + ++ GF P+ P +V+ +E GF + A+ VY +E D
Sbjct: 166 LTGVGARLEIALVQLAMDAAMRWGFIPMIPPALVKPRAMEGTGFLGQAAD-DVYHLEKDD 224
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
L+GT+E+P+ H D IL ++LP +YAAFS CFR EAG+ G TRG++RVH F K+E
Sbjct: 225 LYLVGTSEVPLAAYHSDEILDPTILPRRYAAFSPCFRREAGSHGRDTRGIFRVHWFDKVE 284
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
MF + E+S H+ L+ E + L L ++++
Sbjct: 285 MFTYTTLEDSWDEHQRLLGWEREWLDLLELPYRVI 319
>gi|326329349|ref|ZP_08195674.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
gi|325952924|gb|EGD44939.1| serine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
Length = 423
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R++ + V A+ R +++++ + L + + R E+ + K+
Sbjct: 2 IDPRILREDPDRVRASQERRGASSDVVDRALSADSARRAAIADFEAKRAEQKQMGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q+L+ E K L + E DE ++ + IPN+ D P GGED ++
Sbjct: 61 QAKGEEKQQLLAEVKELAAAVKEAEAAQNAAEDEWKKALKAIPNLAD-DAPAGGEDDFVL 119
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F F +DH +LGK L D + A+VSGS+FY+L LE LIN
Sbjct: 120 IEKVGKPRDFEAEGFEPRDHVELGKMLGAIDLERGAKVSGSRFYFLTGVGAELEFALINL 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + + GFT + P +VR +E GF + + VY IE D L+GT+E+P+ H
Sbjct: 180 AMEQAREAGFTQVIAPALVRPEAMEGTGFLDQ-VDDGVYKIEDDDLYLVGTSEVPMAAYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LP +YAAFS CFR EAG+AG T+G+ RVHQF K+EMFV+ EES + H+
Sbjct: 239 ADEILDPETLPRRYAAFSSCFRKEAGSAGKDTKGIIRVHQFEKVEMFVYTTVEESYAEHQ 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ E+ L L ++++
Sbjct: 299 RLLEWEKAFLDKLELAYQVI 318
>gi|89892754|ref|YP_516241.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|122484260|sp|Q252J5.1|SYS_DESHY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|89332202|dbj|BAE81797.1| seryl-tRNA synthetase [Desulfitobacterium hafniense Y51]
Length = 421
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 176/318 (55%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E V ++ RNSN +L+ LE E+ + EV+ L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAKRNTVSEEVGRR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K + ++LI E + + + + LE+ L ++ ++ IPN+ H VPVG E+ ++
Sbjct: 62 KKHGEDAEQLILEMREVGQKVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEEANV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+T G P F+F H+++G+ LDI DF A +V+G++F + K LE LI++ L
Sbjct: 122 EVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALISFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+ + P +V + + G P+ + + G D LI TAE+PV ++ +
Sbjct: 182 DRHSAKGYVEVLPPYMVHRNSMIGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYRE 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F PE S E L
Sbjct: 241 EILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 301 TRDAESILQELELPYRVM 318
>gi|375083100|ref|ZP_09730133.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742228|gb|EHR78633.1| seryl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 455
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 189/343 (55%), Gaps = 30/343 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N + V ++ R L+ + LEL EK K+++ LR ERN +A
Sbjct: 2 LDIKLIRENPDLVKGDLIKRGELEKLKWIDEILELDEKWRENLKKINLLRRERNRLAVEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K K EP E +L+ + + + +E++ ++ +++ +PN+TH VP+G +
Sbjct: 62 GKRKKAGEPVE--ELLAKSNEIVRQIEEIEKENREIKEKIDYYLWRLPNITHESVPIGKD 119
Query: 189 DC-------------------SIIRKTVGNPS--VFNFPVKDHFQLGKALDIFDFDAAAE 227
D S + ++ G V + + H L L DF+ AA+
Sbjct: 120 DTENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVIEWKPQLHADLLPKLGGADFERAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ 287
VSGS+F+YL NE V+L++ LI + L ++I++GF P+ P +VR V E N
Sbjct: 180 VSGSRFFYLLNEIVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEEGVTSFDDFENV- 238
Query: 288 VYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
+Y +EG D LI T+E P+ G+H + IL + LPL YA S CFR EAG AG T+G++R
Sbjct: 239 IYKVEGEDLYLIPTSEHPLAGLHANEILDGNDLPLLYAGVSPCFRKEAGTAGKDTKGIFR 298
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VHQF K+E FV+ +PEES +HE+L++ E+++ +L + ++++
Sbjct: 299 VHQFHKVEQFVYSRPEESWEWHEKLLQNAEEIFQALEIPYRVV 341
>gi|61553733|gb|AAX46450.1| seryl-tRNA synthetase 2 [Bos taurus]
Length = 459
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 170/308 (55%), Gaps = 15/308 (4%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL---------EPSERQKLIEEG 147
+ +L ++ ++++ +++++ L EE+ AV ++ + + + Q L G
Sbjct: 24 SKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARG 83
Query: 148 KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPV 207
+ +++ L L +L ++ A +PN THPDVPVG E + + VG+ F+F
Sbjct: 84 REIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVGDESQARVLHVVGDKPAFSFQP 143
Query: 208 KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPE 267
+ H ++ + LDI + VSG + YYL+ +L+ GL+N+TL+++I RGFTP+T P+
Sbjct: 144 RGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPD 203
Query: 268 IVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKY 324
++R V E CG P +Q+Y+I+ + D L GTAE+ + G MD ++ LP++
Sbjct: 204 LLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRM 263
Query: 325 AAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSS 382
C+R E G GLYRVH F+K+EMF P E+S EE + ++ ++ +
Sbjct: 264 VCSXTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTE 322
Query: 383 LGLHFKLL 390
LGLHF++L
Sbjct: 323 LGLHFRVL 330
>gi|409356574|ref|ZP_11234961.1| seryl-tRNA ligase [Dietzia alimentaria 72]
Length = 420
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 175/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + +L + +L E + D R E+ A K+ G
Sbjct: 2 IDLKLLRENPDVVRESQRTRGEDPSLVDQLLAADESRRSSIAAADGARAEQKAHGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P +R L+E LK+ + EE E+++ + + N+ P GGED +
Sbjct: 61 QASPEDRPALLEAAGALKKAVKDAEESEKTAAAEVERLQRMLSNVVEDGTPAGGEDDFVE 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +G F+F KDH +LG++L + D + A+VSG++FY+L +L++G++
Sbjct: 121 IERIGEIPTFDFEPKDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR +++ GF A+ +VY +E D L+GT+E+ + G H
Sbjct: 181 KATANGFTMMIPPVLVRPEIMQGTGFLGAHAD-EVYKLEADDLYLVGTSEVALAGYHQGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +Y +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++ H L+
Sbjct: 240 ILDLSDGPKRYCGWSSCFRREAGSHGKDTRGIIRVHQFDKVEMFSWCKPEDAREEHLRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ ++GL F+++
Sbjct: 300 SFEKEMLQAMGLPFRVI 316
>gi|251800106|ref|YP_003014837.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547732|gb|ACT04751.1| seryl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 425
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 174/322 (54%), Gaps = 8/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D KWIR+N+E V + ++ ++E+ + +Q+E++ LR+ERN ++
Sbjct: 2 LDIKWIRNNREEVQTVADRKGIAISISQLVEVDDARRRLQQEIEELRQERNQTIQEINLS 61
Query: 135 LEPSERQKLIEEGKNLKE---GLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
+ S+ + + ++ +KE + +LE + + E Q +PN+ PD P+G D
Sbjct: 62 IYSSDEKDVEQKKLRMKEINQRIASLETEQRAVQAEYADLMQIVPNIVSPDTPIGKSDQD 121
Query: 192 IIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ + G P +F+F +KDH +LG+ + + + +GS+ YYL L +
Sbjct: 122 NVEVRRFGEPPIFDFEIKDHVKLGELHQMINIPRGVKTAGSRNYYLTGAGAALHRAVQQL 181
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ RGFT L P +VR + GF P G + Q Y I+G D+ L+GT+E+P+ +
Sbjct: 182 ALDLLMARGFTLLEVPLMVRKEALFNTGFFPLGED-QTYRIDGGDKYLVGTSEVPLISFY 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSY 368
+ I+ S P++ AA S CFR+E G+AG GLYRVHQFSK+E + C+ E S+
Sbjct: 241 DNEIVDAS-KPIRLAAASTCFRSEVGSAGKDVHGLYRVHQFSKVEQVIICEDSVEASEQM 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
+E+ + EDL L L ++++
Sbjct: 300 LQEITQNAEDLLQQLELPYRVM 321
>gi|291296089|ref|YP_003507487.1| seryl-tRNA synthetase [Meiothermus ruber DSM 1279]
gi|290471048|gb|ADD28467.1| seryl-tRNA synthetase [Meiothermus ruber DSM 1279]
Length = 424
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 182/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N EAV I + L+ +LEL +++ +++ +++++ ERNA A +
Sbjct: 2 LDIKFIRENPEAVRQAIEKKGLTLELDKLLELDQEVQTLKRTIEKIQAERNANAKAAA-R 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+P ER +IE GK + L LE L L +L+Q P + PVG +D +
Sbjct: 61 AKPEERAAMIERGKEIGRQLAELEPQLRTLEAQLKQLLYLTPTLPWEGAPVGPDDSFNVE 120
Query: 195 KTV-GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
V GNP F F DH L + DF+ AA+VSGS+ Y LK + ++ E L+ + L
Sbjct: 121 TRVHGNPRTFLFEPLDHVALMEKNGWGDFERAAKVSGSRSYILKGDLMVYEQALLRFALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+I+ GFTP++ P + + + G P A QVY+++G + L GTAE+ + +H
Sbjct: 181 RMIQAGFTPMSVPSLTKEEALYAHGQFP-AARDQVYAVDGGEVYLAGTAEVLLNYLHAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEE 371
IL+E+ LP Y A S CFR+EAG+AG RGL RVHQF+K+E +V C+ +ES+ + E
Sbjct: 240 ILAETELPKTYCALSPCFRSEAGSAGRDVRGLMRVHQFNKVEQYVLCKADLDESNRWFET 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ I E + +L L ++++
Sbjct: 300 MLSISEGILQALELPYRVI 318
>gi|319950525|ref|ZP_08024436.1| seryl-tRNA synthetase [Dietzia cinnamea P4]
gi|319435809|gb|EFV91018.1| seryl-tRNA synthetase [Dietzia cinnamea P4]
Length = 420
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 176/317 (55%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V + R R + +L + +L E + D R E+ A K+ G
Sbjct: 2 IDLKLLRENPDLVRDSQRTRGEDPSLVDQLLAADEARRSSIAAADSARAEQKAHGKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+E LK+ + EE E+ + + + N+ P GGED +
Sbjct: 61 KASPEERPALLEAAGALKQAVKDAEEAEKAAAAEVDRLQRLLSNVVEEGTPAGGEDDFVE 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ +G F+F KDH +LG++L + D + A+VSG++FY+L +L++G++
Sbjct: 121 IERIGEIPTFDFEPKDHLELGESLGLLDMERGAKVSGARFYFLTGYGALLQLGMLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT + P +VR +++ GF + A+ +VY +E D L+GT+E+ + G H
Sbjct: 181 KATANGFTMMIPPVLVRPEIMQGTGFLGQHAD-EVYRLEDDDLYLVGTSEVALAGYHQGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P +Y +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PEE+ H+ L+
Sbjct: 240 ILDLSAGPKRYCGWSSCFRREAGSHGKDTRGIIRVHQFDKVEMFSWCKPEEAHEEHKRLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ ++GL F+++
Sbjct: 300 GFEKEMLEAMGLPFRVI 316
>gi|313894660|ref|ZP_07828223.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440850|gb|EFR59279.1| serine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 426
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 176/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D K++R+N + V N+ NR++ +LE + Y++ + +V+ L+ RN+V ++
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTTGDLETFVSAYDERRQLIGKVEELKALRNSVTEEISQL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K I E K + + + L+ + ++ L+ A +PNM VPVG E+ ++
Sbjct: 62 KRNKENADDKIAEMKKVGDEIAELDNRIREVETNLRDAALMLPNMCDSSVPVGADEEENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F V+ H+ LG++LDI DF+ A ++SG++F K LE LIN+ +
Sbjct: 122 EQRKWGEPRQFDFEVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALINFMV 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 182 DLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEDTEYFLIPTAEVTLTNYHG 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S E
Sbjct: 241 DEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKELET 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L F+++
Sbjct: 301 LTDNAEEVLRLLELPFRVI 319
>gi|212695810|ref|ZP_03303938.1| hypothetical protein ANHYDRO_00343 [Anaerococcus hydrogenalis DSM
7454]
gi|212677185|gb|EEB36792.1| hypothetical protein ANHYDRO_00343 [Anaerococcus hydrogenalis DSM
7454]
Length = 429
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANK- 130
+D K++R+N E V NI+ + + L LV +EL +K+ +V+ E D LR +RN + +
Sbjct: 2 LDIKFVRENPELVKENIKKKFQDEKLVLVDEVIELDQKLRDVKTEGDNLRAKRNKTSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E +++ +E ++ + LV +EED K D+L+++ Q IP M VP+G +
Sbjct: 62 GALMGQGKKDEAEEVKKEVGDINDRLVQIEEDTRKFQDQLKEKMQVIPQMIDDSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G ++ V H + ++ + D D+A + SG+ FYYLK + L +
Sbjct: 122 DSENVEIERFGENVTPDYEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I +G+ P ++RS VV +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDKGYEYHIPPFMIRSDVVTGV-MSFAEMEDMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G ++SI ES +PLK ++S CFR E GA G RG+YR+HQF K EM + C+PE+S
Sbjct: 241 GKFINSINEESDMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSKK 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+++EL + + + SL + + L
Sbjct: 301 FYDELWQNTVEFFRSLEIPVRTL 323
>gi|160901593|ref|YP_001567174.1| seryl-tRNA synthetase [Petrotoga mobilis SJ95]
gi|189083577|sp|A9BEX3.1|SYS_PETMO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|160359237|gb|ABX30851.1| seryl-tRNA synthetase [Petrotoga mobilis SJ95]
Length = 424
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 178/322 (55%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERN---AVANK 130
+D K+IR+N + + + RN+ ++ + ++ E+ + ++++ LR +RN + K
Sbjct: 2 LDLKYIRENPQEIKEALTKRNNETSIIDEIISFDEERRKLLQQIETLRAQRNQNSKLVAK 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
+K + + E +++I +GK + E + LE DL + D L + C+PN+ VPVG E+
Sbjct: 62 LKAQKKNDEAEEIIIQGKEISEQIKNLESDLKNIEDNLNYKLLCVPNIPDSGVPVGKDEN 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ LG L++ DFD AA++SGS+F LK + LE+ LIN
Sbjct: 122 ENLEVRRWGKPREFDFEPKAHWDLGTELNLLDFDRAAKLSGSRFTILKGDIARLELALIN 181
Query: 250 WTLSEVIK-RGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + K G+T + P +V + G P+ + +Y LI TAE+ + G
Sbjct: 182 FMIDLHTKDHGYTFILPPHLVTKETITSSGQLPKFED-DLYKTSLDQMYLISTAEVSLAG 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H + L + LPLKY A++ C+R EAG+ G RG+ R HQF K+E+F + PEES
Sbjct: 241 LHRNETLEFNSLPLKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELFWYTTPEESSQA 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
EEL E + L L ++++
Sbjct: 301 LEELTSHAEKVLQLLNLPYRVV 322
>gi|183601984|ref|ZP_02963353.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682896|ref|YP_002469279.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190472|ref|YP_002967866.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195878|ref|YP_002969433.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384190707|ref|YP_005576455.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|384191850|ref|YP_005577597.1| Serine--tRNA ligase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
gi|384193473|ref|YP_005579219.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BLC1]
gi|384195028|ref|YP_005580773.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
gi|387820339|ref|YP_006300382.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis B420]
gi|387822006|ref|YP_006301955.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423678995|ref|ZP_17653871.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BS
01]
gi|254783007|sp|B8DW52.1|SYS_BIFA0 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|183218869|gb|EDT89511.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620546|gb|ACL28703.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248864|gb|ACS45804.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250432|gb|ACS47371.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289178199|gb|ADC85445.1| Seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295793459|gb|ADG32994.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
gi|340364587|gb|AEK29878.1| Serine--tRNA ligase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
gi|345282332|gb|AEN76186.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BLC1]
gi|366042184|gb|EHN18665.1| seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BS
01]
gi|386653040|gb|AFJ16170.1| Seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis B420]
gi|386654614|gb|AFJ17743.1| Seryl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bi-07]
Length = 428
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ E V + R R + L + VL E+ + K+ + R + + ++
Sbjct: 2 LDIQFIREHPEVVKESQRKRGESVELVDEVLRADEERRSSLKQFEEARARQKEIGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P E+ KLI + K L E + + + ++ + N+ P P GGED ++
Sbjct: 61 KAAPDEKAKLIAQTKELSEQVASFKASADTADEQYTTAMWQLSNIVEPQAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG F F KDH LG+ + D +VSGS+FY+L+ + L++ ++
Sbjct: 121 MRKVGQIRDFAAEGFEPKDHLTLGEEVAGIDMKRGVKVSGSRFYFLRGDVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GF TP +VR V+ GF A+ ++Y + E D L+GT+E+ + G+
Sbjct: 181 AVDQAQEHGFILAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDDYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + IL S PL+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+ +PE SD+ H
Sbjct: 240 HENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYAKPENSDAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +EE++ + + + ++++
Sbjct: 300 QKLLAMEEEMLAKVEVPYRVI 320
>gi|221633715|ref|YP_002522941.1| seryl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
gi|254783499|sp|B9L131.1|SYS_THERP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|221156826|gb|ACM05953.1| seryl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 173/318 (54%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D + IR++ + V +R N+ A L+ +LEL E+ + EV++L+ +RNA + ++
Sbjct: 2 LDLRLIREHPDLVREALRKLNTEAPLDEILELDERRRQLVAEVEQLKAQRNAESKRIGQL 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
ER+ I + L + + L+ +L + + LQ +PN+ PDVPVG E +++
Sbjct: 62 PAGPEREATIAAMRALGDRIEALDRELAAIEERLQALLLEVPNLPDPDVPVGPDESGNVV 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G P F+FPVK H++L + L + DF +++GS+FY L+ + L+ LI W +
Sbjct: 122 VRHWGEPRPFDFPVKPHWELAEELGLIDFARGVKIAGSRFYVLRGDLARLQRALIAWMID 181
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
V + G+ + P +VR + G P+ + +Y E D LI TAE+PV + D
Sbjct: 182 LHVNEHGYLEVYPPFLVRREAMIGTGNLPKFGDN-LYHDEETDLWLIPTAEVPVTNLFRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ A + CFR E +AG RG+ RVHQF K+EM F +P+ SD + L
Sbjct: 241 EILPPGSLPIYLVAATPCFRKERVSAGRDVRGIKRVHQFEKVEMVKFVEPDRSDEELQRL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ ED+ L L ++++
Sbjct: 301 VADAEDVLRRLELPYRVV 318
>gi|320530062|ref|ZP_08031132.1| seryl-tRNA synthetase [Selenomonas artemidis F0399]
gi|320137495|gb|EFW29407.1| seryl-tRNA synthetase [Selenomonas artemidis F0399]
Length = 437
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 181/324 (55%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N +AV ++NR + +L L E+ + ++V+ + RNAV+ ++ +
Sbjct: 16 LDMKFVRENLDAVHEMLKNRCNGLDLSPFTALDEERRRILQDVEEKKARRNAVSKEIGVR 75
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDL----VKLTDELQQEAQCIPNMTHPDVPVGGED 189
+ E + ++ E + L + + L+EDL +KL D L Q IPNM DVPVG ++
Sbjct: 76 KKAGEAAEDVVAEMRTLGDEIAALDEDLRDVELKLRDLLLQ----IPNMPKADVPVGKDE 131
Query: 190 CSI--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+R+T G P VF+F K H+ +G+ L I D + AA+V+G++F + K LE
Sbjct: 132 TENPEVRRT-GTPRVFDFEPKAHWDIGERLGILDAERAAKVTGARFTFYKGLGARLERAC 190
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ + K G+T + P IV S + G P+ A ++ +EG D L+ TAE+P
Sbjct: 191 INFMMDLHAEKHGYTEMLAPYIVNESSMVGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPT 249
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL + LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S
Sbjct: 250 TNYHRDEILDAAQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSW 309
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E ++ ED+ +L L ++++
Sbjct: 310 DELESMVEAAEDVLRTLELPYRVI 333
>gi|403728030|ref|ZP_10947908.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
gi|403203673|dbj|GAB92239.1| serine--tRNA ligase [Gordonia rhizosphera NBRC 16068]
Length = 418
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 177/318 (55%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +RDN + V + R R + + L + E D LR E+ A+ ++ G
Sbjct: 2 IDLKILRDNPDLVRTSQRTRGEDPGMVDALLDADAARRAAIVEADALRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+ L+ +GK L E + + + I N+ P GGE ++
Sbjct: 61 QAQGDEKTALLAKGKELAEQVKAAVARQGAADEAAATAHRAIGNIVEDGAPAGGESDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG+ L + D + A+VSGS+FY+L ML++GL+
Sbjct: 121 LEHVGEPRSIENP-KDHLELGELLGLIDMERGAKVSGSRFYFLTGPGAMLQLGLLTMAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIPVGGIHMD 312
+ + GFT + P +VR ++ GF GA++ ++Y +E D L+GT+E+P+ G H D
Sbjct: 180 KAVANGFTLMVPPVLVRPEIMSGTGFL--GAHSDEIYHLEEDDLYLVGTSEVPLAGYHSD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++ + H++L
Sbjct: 238 EILDLSSGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAHTEHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 298 LAWEKEMLAAIDVPYRVI 315
>gi|427413904|ref|ZP_18904095.1| serine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714945|gb|EKU77944.1| serine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 426
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 176/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D +++R+N EAV N+ NR++ +LE +LY+ ++ +EV++L+ +RN+V ++
Sbjct: 2 LDLRFVRENLEAVQQNLDNRHTTGDLEDFAKLYDLRKDLIQEVEQLKAQRNSVTAEISAL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K I E + + + + L+ + + LQ A +PNM VPVG E+ +
Sbjct: 62 KRNKENADDKIAEMQKVGDKIAELDGKIRETESSLQNIALMLPNMCDASVPVGEDENDNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+FP++ H+ LG++LDI D++ AA+ SG++F + K LE LIN+ L
Sbjct: 122 EMRRWGKPREFDFPIQAHWDLGESLDILDWERAAKESGARFTFYKGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K+G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 182 DLHTEKQGYTEMMTPYMVTRQTLTNTGQLPKFAE-DMYKVENTEYFLIPTAEVTLTNFHA 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
ILS + LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM PE S E
Sbjct: 241 GEILSANELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLATPETSYQELES 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L +++
Sbjct: 301 LTDNAEEVLRLLELPHRVI 319
>gi|414154299|ref|ZP_11410618.1| Serine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454090|emb|CCO08522.1| Serine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 424
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 181/323 (56%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +R N E V +R R S+ +L+ L+L + V++L+ RN V+ ++ GK
Sbjct: 2 LDIKLVRSNPELVLEGLRKRGSDISLDEFLQLDARRREKLVVVEQLKNTRNVVSQEI-GK 60
Query: 135 LEPSERQKLI--EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GEDC 190
L+ + + +E + + + + L++++ L + LQ+ IPN+ H VP G +D
Sbjct: 61 LKKAGQDAAAKQQEMRQVSQQIKDLDDEIRTLEERLQEILLSIPNIPHESVPEGKDDQDN 120
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+R+ G P F F K H+ LG+ALDI DF+ +V+G++F + K LE LIN+
Sbjct: 121 QEVRRW-GKPRQFEFAPKAHWDLGEALDIIDFERGGKVTGARFAFYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + G+T + P IV + + G P+ A ++ +EG + LI TAE+PV +
Sbjct: 180 MLDLHTREHGYTEVFPPFIVNADSMVGTGQLPKFAE-DMFKLEGLNYYLIPTAEVPVTNL 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ + IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ FC+PEES
Sbjct: 239 YREEILPADKLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCKPEESFDEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
E L E + +LGL ++++L
Sbjct: 299 ERLTANAEKVLQALGLPYRVVLL 321
>gi|294793380|ref|ZP_06758525.1| serine--tRNA ligase [Veillonella sp. 6_1_27]
gi|417000974|ref|ZP_11940968.1| serine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|294455811|gb|EFG24176.1| serine--tRNA ligase [Veillonella sp. 6_1_27]
gi|333975848|gb|EGL76725.1| serine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 426
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 179/321 (55%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++R+N + V N+ NR++ +L+ + Y++ + V+ L+ RN+V +K+
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDC 190
K E ++ + I E K + + + + + ++ +L+ A +PNM VPVG ED
Sbjct: 62 KRNKENADEK--IAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADEDE 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ ++ G P F+F V+ H+ LG+ LDI DF+ A ++SG++F K LE LIN+
Sbjct: 120 NVEQRKWGEPRQFDFDVQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ V K G+T + TP +V + G P+ A +Y +EG + LI TAE+ +
Sbjct: 180 MVDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEGTEYFLIPTAEVTLTNY 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S
Sbjct: 239 HGGEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E L E++ L L F+++
Sbjct: 299 ETLTDNAEEVLRLLELPFRVI 319
>gi|169627258|ref|YP_001700907.1| seryl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
gi|419711239|ref|ZP_14238703.1| seryl-tRNA synthetase [Mycobacterium abscessus M93]
gi|420861987|ref|ZP_15325383.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0303]
gi|420866572|ref|ZP_15329959.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RA]
gi|420875873|ref|ZP_15339249.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RB]
gi|420912788|ref|ZP_15376100.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-R]
gi|420913982|ref|ZP_15377291.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-S]
gi|420921065|ref|ZP_15384362.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-S]
gi|420924875|ref|ZP_15388167.1| serine--tRNA ligase [Mycobacterium abscessus 6G-1108]
gi|420964317|ref|ZP_15427539.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0810-R]
gi|420975220|ref|ZP_15438408.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0212]
gi|420980602|ref|ZP_15443775.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-R]
gi|420988618|ref|ZP_15451774.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0206]
gi|421005085|ref|ZP_15468205.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0119-R]
gi|421010626|ref|ZP_15473729.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-R]
gi|421021059|ref|ZP_15484115.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-S]
gi|421021127|ref|ZP_15484180.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0731]
gi|421026923|ref|ZP_15489963.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-R]
gi|421032139|ref|ZP_15495165.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-S]
gi|421037727|ref|ZP_15500739.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-R]
gi|421046222|ref|ZP_15509222.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-S]
gi|238688911|sp|B1MEI9.1|SYS_MYCA9 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169239225|emb|CAM60253.1| seryl-tRNA synthetase (SerS) [Mycobacterium abscessus]
gi|382940129|gb|EIC64455.1| seryl-tRNA synthetase [Mycobacterium abscessus M93]
gi|392067348|gb|EIT93196.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RB]
gi|392074903|gb|EIU00737.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0726-RA]
gi|392077148|gb|EIU02979.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0303]
gi|392114782|gb|EIU40551.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-R]
gi|392125476|gb|EIU51229.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0125-S]
gi|392130901|gb|EIU56647.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-S]
gi|392147283|gb|EIU73003.1| serine--tRNA ligase [Mycobacterium abscessus 6G-1108]
gi|392175346|gb|EIV01008.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0212]
gi|392176400|gb|EIV02058.1| serine--tRNA ligase [Mycobacterium abscessus 6G-0728-R]
gi|392182897|gb|EIV08548.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0206]
gi|392206782|gb|EIV32365.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-S]
gi|392206899|gb|EIV32480.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0119-R]
gi|392216063|gb|EIV41609.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0122-R]
gi|392217970|gb|EIV43502.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0731]
gi|392229408|gb|EIV54919.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-R]
gi|392232672|gb|EIV58172.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-S]
gi|392235675|gb|EIV61173.1| serine--tRNA ligase [Mycobacterium abscessus 4S-0116-S]
gi|392236841|gb|EIV62337.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0930-R]
gi|392258994|gb|EIV84435.1| serine--tRNA ligase [Mycobacterium abscessus 3A-0810-R]
Length = 418
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 179/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R R + L E++L+ D LR E+ A + K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRLRGEDPALVEVLLDADTARRAAISTADTLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ L + + E + V + + I N+ VP GGE +
Sbjct: 61 KATPEERPALLAAASELAAQVKSAEAEQVVTEAAFTEAHKAISNVVIDGVPAGGEQDFAL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
R+ VG P P KDH +LG++L +FD + A+VSG++FY+L +L++GL+ +
Sbjct: 121 RELVGEPHPIENP-KDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLLQLAVQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT L P +V+ ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 TAVANGFTLLIPPVLVKPEIMGGTGFLGAHAD-EVYHLEEDDLYLVGTSEVPIAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ HE+++
Sbjct: 239 ILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEAEHEKIL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
E + + + ++++
Sbjct: 299 GWERQMLGHIEVPYRVI 315
>gi|88856638|ref|ZP_01131294.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1]
gi|88814099|gb|EAR23965.1| seryl-tRNA synthetase [marine actinobacterium PHSC20C1]
Length = 421
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 168/317 (52%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N EAV + R ++ L + + +K E + LR E+N+ K
Sbjct: 2 IDPQILRENPEAVRQSQIARGASVQLVDDAIAADQKRRASIGEFEALRAEQNSF-GKQVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P E++ L+ E + L + + + + + I N+ VPVGGED +
Sbjct: 61 QAPPEEKKALVAEAQKLAARVKAAQSVSAEAEADFTRIVGAIGNIAVDGVPVGGEDDWEL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P+ F+F +DH LG+ L D +VSGS+FY+LK LE+GL+N L
Sbjct: 121 VREVGTPASFDFEPRDHADLGEILGAIDIPRGVKVSGSRFYFLKGVGARLELGLMNMALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
I F PL TP +VR ++ GF ++ +VY + + L GT+E+ + G H D
Sbjct: 181 RAIAGDFIPLITPTLVRPEIMAGTGFLGEHSD-EVYYLPADELYLTGTSEVALAGYHSDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S L+YA +S C+R EAG+AG RG+ RVHQF+KLEMF + PE + HE L+
Sbjct: 240 ILDLSKGALRYAGWSTCYRREAGSAGKDNRGILRVHQFNKLEMFSYVLPENALEEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
+E + + L ++++
Sbjct: 300 AFQESMLQACELSYRVI 316
>gi|420237280|ref|ZP_14741751.1| seryl-tRNA ligase [Parascardovia denticolens IPLA 20019]
gi|391879551|gb|EIT88057.1| seryl-tRNA ligase [Parascardovia denticolens IPLA 20019]
Length = 428
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 181/332 (54%), Gaps = 29/332 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN----- 129
+D ++IR+N E V + R R + ++L +++L + DRLR R+A+A+
Sbjct: 2 LDIQFIRENPEVVKESQRKRGES------VDLVDQIL----QADRLR--RDALADFESTR 49
Query: 130 ---KMKGKL----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPD 182
K GK ER +I + K L + +E K T++ + N+ P+
Sbjct: 50 AEQKKMGKAVAAASAEERPAIIAQTKELAAKVSEYKETADKATEDYTTAMWKLSNIVEPE 109
Query: 183 VPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
P GGED ++ K VG F F K+H +LG+ + D +VSGS+FY+L+
Sbjct: 110 APEGGEDDYVVVKKVGQIRDFAAEGFEPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGA 169
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD-QCL 298
LE+ ++ + + + GF TTP +VR ++ GF A ++Y + D Q L
Sbjct: 170 IARLELAMLTMGVDQAERNGFIMATTPTLVRPEIMAGTGFLNSHAE-EIYRLREPDEQYL 228
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
+GT+E+ + G+H D IL S PLKYA +S C+R EAGAAG T G+ RVHQF+K+EMFV
Sbjct: 229 VGTSEVALAGMHEDEILDLSHGPLKYAGWSSCYRREAGAAGKDTMGIIRVHQFNKVEMFV 288
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+C+ EES H++L+ +E+++ + + ++++
Sbjct: 289 YCKQEESYEQHQKLLAMEQEMLGKVEVPYRII 320
>gi|443493409|ref|YP_007371556.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
gi|442585906|gb|AGC65049.1| seryl-tRNA synthetase SerS [Mycobacterium liflandii 128FXT]
Length = 419
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V + +R + L + +L D LR E+ A A+K G
Sbjct: 2 IDLKLLREDPDVVRRSQLSRCEDPALVDALLTADTARRTAISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L++ K+L E + E + IPN+ VP GGED +
Sbjct: 61 GASPEERPALLQRAKDLAEQVKAAEATQSETETAFTAAHMAIPNVILGGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P + P KDH +LG++L + D A+V+GS+FY+L + +L++GL+ L
Sbjct: 121 LDMVGEPRALDNP-KDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF P+ P +VR V+ GF A+ +VY +E D L+GT+E+P+ G H D
Sbjct: 180 LAVDNGFIPMIPPVLVRPEVMAGTGFLGAHAD-EVYRLEADDLYLVGTSEVPMAGYHADE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L+
Sbjct: 239 IVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCAPADAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 AWQREMLAQIEVPYRVI 315
>gi|397904608|ref|ZP_10505510.1| Seryl-tRNA synthetase [Caloramator australicus RC3]
gi|397162291|emb|CCJ32844.1| Seryl-tRNA synthetase [Caloramator australicus RC3]
Length = 426
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 180/324 (55%), Gaps = 9/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR N E V ++ R L++ V+EL E+ + EV+ L+ ++N + ++
Sbjct: 2 LDIKRIRTNPEEVKEALKIRGEAFTLDMIDKVVELDERRREILVEVEALKNKKNTDSQEI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--E 188
K K E L+ E K L + + L+++L K+ +E++ IPN+ + DVP G E
Sbjct: 62 AKLKREGKNADHLVAEMKELSDKIKELDDELAKVEEEIEYLLLRIPNIPNKDVPKGDTDE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D +R+ G P F F K H+ +G L I DF+ A++V+G++F + K LE LI
Sbjct: 122 DNVEVRRW-GEPRKFEFEPKAHWDIGVNLGILDFETASKVTGARFTFYKGLGARLERALI 180
Query: 249 NWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ L K G+T + P +V + G P+ + + D LI TAE+PV
Sbjct: 181 NFFLDLHTEKHGYTEVFPPFMVNRKSMTGTGQLPK-FEEDAFKVSDFDYFLIPTAEVPVT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+HM+ +L S LPLKYAA+S CFR+EAG+AG TRGL R HQF+K+E+ F PE+S
Sbjct: 240 NMHMNEVLDGSKLPLKYAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFADPEKSYE 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLLL 391
E L R E++ LGL ++++L
Sbjct: 300 ELESLTRDAEEVLQLLGLPYRVVL 323
>gi|407472560|ref|YP_006786960.1| seryl-tRNA ligase SerS [Clostridium acidurici 9a]
gi|407049068|gb|AFS77113.1| seryl-tRNA ligase SerS [Clostridium acidurici 9a]
Length = 424
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 179/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N E V + + R N++L++EL E + EV+ ++ ++N V+ ++ K
Sbjct: 2 LDIKRIRNNPEEVKSQLSKRGGEYNIDLIVELDESRRKLLVEVEEMKAKQNQVSKEIPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + ++++E K L + + + ++ ++ +L IPN+ + D+ VG ED
Sbjct: 62 KKEGKDASEVLKEMKELSDKVTQKDIEVKEIEAKLHDAILEIPNIPNADIVVGASDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IRK VG P F+F VK H+ LG LDI DF+ A +++G++F K LE LIN+
Sbjct: 122 EIRK-VGEPHNFDFEVKPHWDLGTDLDILDFERATKLTGARFTLFKGLGATLERALINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
LS K G+T ++ P +V + G P+ ++ I G + LI TAE+PV IH
Sbjct: 181 LSTHTTKHGYTEVSPPFMVNRQSMIGTGQLPK-FEEDMFKISGREFYLIPTAEVPVTNIH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL E LPL Y A++ CFR EAG+AG TRG+ R HQF K+E+ +PE S E
Sbjct: 240 RDEILDEEKLPLYYTAYTPCFRQEAGSAGRDTRGIIRNHQFDKIELVKLVKPESSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + +L + ++++
Sbjct: 300 KLTDNAEQILKALNIPYRVV 319
>gi|270307939|ref|YP_003329997.1| seryl-tRNA synthetase [Dehalococcoides sp. VS]
gi|270153831|gb|ACZ61669.1| seryl-tRNA synthetase [Dehalococcoides sp. VS]
Length = 413
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 177/317 (55%), Gaps = 11/317 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V + +RN++A ++ +LEL + ++ +E+D LR +R +A +
Sbjct: 2 LDLKFIRENAELVRKAVADRNTDAPIDEILELDNRRRHLTQELDNLRAKRKMMAKQRD-- 59
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
IEEG+ L+ + LE +L ++ ++L +PN+ VPVG ++ +++
Sbjct: 60 ------DTAIEEGRVLRGQITELEAELSEVDEKLTDRLLRVPNIPDASVPVGRDESENVV 113
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
G F+F K H++LG+ LDI DFD ++SGS+FY LK E L+ LI + L
Sbjct: 114 LYYRGEKRSFSFTPKPHWELGETLDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLD 173
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K +T + P +++ + G P+ A+ + E D + TAE P+ +H D
Sbjct: 174 LHTRKHDYTEIYPPYMIKRECLVASGNLPKFADNLYHDAE-EDYWWVPTAEAPLTNLHRD 232
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILS LP+ Y A++ CFR E +AG RG+ R+HQF K+E++ +C+PE+S E++
Sbjct: 233 EILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKM 292
Query: 373 IRIEEDLYSSLGLHFKL 389
+ E++ +L + ++L
Sbjct: 293 VADAEEIADALKIPYRL 309
>gi|11499617|ref|NP_070859.1| seryl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
gi|3334361|sp|O28244.1|SYS_ARCFU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|2648500|gb|AAB89219.1| seryl-tRNA synthetase (serS) [Archaeoglobus fulgidus DSM 4304]
Length = 453
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 187/340 (55%), Gaps = 32/340 (9%)
Query: 77 FKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL 135
K +R+N E + + R R + ++ + +EL K K V++LR+ RN +A +K +
Sbjct: 5 LKAVRENPEILYESQRRRGLSVDIVDRAIELDRKWREELKRVNQLRKRRNELARAVK-EA 63
Query: 136 EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SIIR 194
+ ER K+IEE K + E + EE+L +L EL++ IPN+ H VPVG +D ++
Sbjct: 64 KGEERAKVIEEAKAVSEEVKRAEEELKRLEAELEEVLLSIPNIIHESVPVGKDDSENVPI 123
Query: 195 KTVGNPSVF---------------NFPVKDHFQLGKA--LDIF---DFDAAAEVSGSKFY 234
K G V+ + V D +G A ++IF D + AA+V+G++FY
Sbjct: 124 KYWGKAKVYFEDVDAFVEMTQGMAEYEVTDVKPIGHADAVEIFGWADLERAAKVAGARFY 183
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVR----SSVVEKCGFQPRGANTQVYS 290
YL N+ V L+ L + L + K FT ++ P ++R S V F+ +Y
Sbjct: 184 YLLNDLVWLDFALTMYALDFLRKEDFTIVSPPYMMRREAYSGVTAFSDFE-----EVIYK 238
Query: 291 IEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQ 350
+E D LI T+E P+ +HM +L E LPL YA S CFR EAGA G T+G++RVHQ
Sbjct: 239 VEDEDLYLIATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQ 298
Query: 351 FSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F+K+E FVFC PE+S +HE+LI E L+ LG+ ++++
Sbjct: 299 FNKVEQFVFCLPEQSWEWHEKLIENVEKLWQGLGIPYRIV 338
>gi|406874341|gb|EKD24318.1| hypothetical protein ACD_81C00055G0008 [uncultured bacterium]
Length = 440
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 186/334 (55%), Gaps = 18/334 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+++E + A I+N+ +L+ VLE + +++Q++V++L +N + KMK
Sbjct: 2 VDIKFIREHQEEMRAAIKNKRIALDLDAVLEADKVRVDLQQKVEKLSALKNELNEKMKTA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
ER +IEEGK +K+ L E + + +P + D P+G ED ++
Sbjct: 62 KTQEERNPIIEEGKKVKDELAEAEPSYREAKQTFDELMVRVPTVPSSDTPIGTSEDENVE 121
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
G F+F KDH QL + LD+ DF+ A++SG + YYLKNE + L M L+ + ++
Sbjct: 122 IYRWGEQKKFDFEPKDHVQLAEDLDLVDFEKGAKISGYRGYYLKNEGMQLVMALMMYAVN 181
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGF----QPRGANTQVYSIEGAD-----------QCL 298
+++++G+TP+ P +V+ + G+ + ++Y + AD + L
Sbjct: 182 KMVQKGYTPMIPPTLVKGFSLFGSGYFKGLEYDPEIDEIYQVASADKDSEGSTTKDKKFL 241
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
+GT+E + + D +L E LP++ A +S C+R+E G+ G T+G+YRVH+F K+E V
Sbjct: 242 VGTSEPSLLAYYSDEVLKEEQLPIRLAGYSQCYRSEIGSYGKDTKGMYRVHEFMKVEQVV 301
Query: 359 FCQPEESDS--YHEELIRIEEDLYSSLGLHFKLL 390
+ +E ++ +E++ + +++ LGL ++ +
Sbjct: 302 IAKADEDEANKLQQEMMDVSREMHEELGLPYRQI 335
>gi|333992783|ref|YP_004525397.1| seryl-tRNA synthetase [Mycobacterium sp. JDM601]
gi|333488751|gb|AEF38143.1| seryl-tRNA synthetase SerS [Mycobacterium sp. JDM601]
Length = 420
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 172/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R++ + V + R + L + +L D LR E+ A A++ G
Sbjct: 2 IDLTLLREDPDRVRRSQLGRGEDPALVDALLAADTARRTAISAADNLRAEQKA-ASRSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E + L+ IPN+ VP GG D +
Sbjct: 61 AASPEERPVLLARAKELAEQVKAAEAAQAEAEATLRGAHLAIPNVVIDGVPAGGVDDYTV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P P +DH LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPPAIENP-RDHLDLGESLGVIDMGRGAKVSGSRFYFLTGAGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
++ GFTP+ TP +VR ++ GF GA+ + VY +E D L+GT+E+P+ G H D
Sbjct: 180 LAVENGFTPMITPALVRPEIMSGTGFL--GAHAEEVYRLEADDLYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+P E+++ H+ L
Sbjct: 238 EILELSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCRPAEAEAEHDRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + ++ + + + ++++
Sbjct: 298 LGWQREMLARIEVPYRVI 315
>gi|315654341|ref|ZP_07907249.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
gi|315491376|gb|EFU80993.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
Length = 429
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + ++DN E + A+ R N A ++ L E+ + R E+ A + ++ G
Sbjct: 2 IDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRTALTAFETARAEQKAFSKQI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
ER L+E+ K L E + LEE + +E ++ A + N+ VP GGED +
Sbjct: 61 SASKEERPALLEQAKKLSENVKALEEASNQAAEEAKKAAMALENLILDGVPSGGEDDYEV 120
Query: 194 RKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
G P + F +DH LG LD D D A+VSG++FYYLK LE+ ++N
Sbjct: 121 LSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLELAILN 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L I GFTP+ TP +V + GF ++ ++Y + + L GT+E+ + G
Sbjct: 181 AALDTAIAHGFTPMITPCMVSPETMSGTGFLGEHSD-EIYYLPADNLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + I+ S P +Y +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++ H
Sbjct: 240 HTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKPEDAVEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E ++ + + L ++++
Sbjct: 300 QKLLNMEREMLAKVELPYRII 320
>gi|298345751|ref|YP_003718438.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
gi|304390549|ref|ZP_07372502.1| serine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298235812|gb|ADI66944.1| serine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
gi|304326305|gb|EFL93550.1| serine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 443
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + ++DN E + A+ R N A ++ L E+ + R E+ A + ++ G
Sbjct: 16 IDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRAALTAFETARAEQKAFSKQI-G 74
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
ER L+E+ K L E + LEE + +E ++ A + N+ VP GGED +
Sbjct: 75 SASKEERPALLEQAKKLSENVKALEEASNQAAEEAKKAAMVLENLILDGVPSGGEDDYEV 134
Query: 194 RKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
G P + F +DH LG LD D D A+VSG++FYYLK LE+ ++N
Sbjct: 135 LSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLELAILN 194
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L I GFTP+ TP +V + GF ++ ++Y + + L GT+E+ + G
Sbjct: 195 AALDTAIAHGFTPMITPCMVSPETMSGTGFLGEHSD-EIYYLPADNLYLTGTSEVALAGY 253
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + I+ S P +Y +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE++ H
Sbjct: 254 HTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKPEDAVEEH 313
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E ++ + + L ++++
Sbjct: 314 QKLLNMEREMLAKVELPYRII 334
>gi|327400152|ref|YP_004340991.1| seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327315660|gb|AEA46276.1| Seryl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 453
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 188/337 (55%), Gaps = 26/337 (7%)
Query: 77 FKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKL 135
K +R+N E + + R R + + E +EL + E++ LR ERN ++ +K K
Sbjct: 5 LKALRENPEILMESQRRRGESTEIVERAIELDKLWRQKLHELNNLRHERNKLSAAIK-KA 63
Query: 136 EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SIIR 194
ER KLIEE K + E + EE+L KL +EL + IPN+ H VP+G +D ++
Sbjct: 64 SKDERAKLIEEAKKIAEKVKAGEEELKKLEEELNRVLLSIPNILHESVPIGKDDTENVPI 123
Query: 195 KTVGNPSVF---------------NFPVKDHFQLGKALDI-----FDFDAAAEVSGSKFY 234
+ G P V+ ++ V D +G A + D + AA+V+GS+FY
Sbjct: 124 RFWGKPKVYREHVEEFIKQTGGNIDYDVIDRLPVGHADAVETWGWADIERAAKVAGSRFY 183
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEG 293
YL N+ V L+ LI++ L + K+GF ++ P ++R E G G +V Y +EG
Sbjct: 184 YLLNDLVWLDFALISYALDFLAKQGFRIVSPPYMMRRQAYE--GVTALGDFEEVIYKVEG 241
Query: 294 ADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSK 353
D LI T+E P+ +HM+ +++E LPL YA S CFR EAGA G T+G++RVHQF+K
Sbjct: 242 EDLFLIATSEHPLAAMHMNEVIAEDDLPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQFNK 301
Query: 354 LEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+E FV+C PEES +HE+LI E L+ L + ++++
Sbjct: 302 VEQFVYCLPEESWEWHEKLIENAEKLWQGLEIPYRIV 338
>gi|241956232|ref|XP_002420836.1| putative seryl-tRNA synthetase, putative [Candida dubliniensis
CD36]
gi|223644179|emb|CAX40988.1| putative seryl-tRNA synthetase, putative [Candida dubliniensis
CD36]
Length = 455
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 161/283 (56%), Gaps = 10/283 (3%)
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
+++ ++ ER+ +A +K K + Q+ E K +K L LE+ + L +E+ +A+ +
Sbjct: 68 QINEMKRERDLIAESLKSKT--GDLQQFKERLKEIKTALKPLEKQVKTLQEEIYAKAESL 125
Query: 176 PNMTHPDVPVGGEDCSIIR----KTVGNPSVF-NFPVKDHFQLGKALDIFDFDAAAEVSG 230
PN+ VP +++ + + F DH ++G + +I DF+ A++VSG
Sbjct: 126 PNLIDKSVPADPLKEEVVQFINCHSEEDAKTFKTLSAHDHKEIGVSFNILDFNVASKVSG 185
Query: 231 SKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--QV 288
+YYL + +LE LI + LS+ KRG+ LT P +V+S +V CGF+P N Q+
Sbjct: 186 PSWYYLIGDGALLEQALIQYALSKARKRGYLMLTPPSVVKSEIVSACGFKPNDQNNEKQI 245
Query: 289 YSIEGADQCLIGTAEIPVGGIHMDSIL-SESLLPLKYAAFSHCFRTEAGAAGTATRGLYR 347
Y +E + L GTAEIP+ G H S+ S + P+KY S +R EAGA+G T+GLYR
Sbjct: 246 YQLEDEGKSLTGTAEIPLAGFHASSVFPSGTQFPIKYVGVSRAYRAEAGASGRDTKGLYR 305
Query: 348 VHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
VH+F+K+E+F F E++ E+L ++ ++ + LGL KLL
Sbjct: 306 VHEFTKVELFHFTTAEKAAQELEDLKDMQVEIVTELGLSAKLL 348
>gi|323487011|ref|ZP_08092323.1| hypothetical protein HMPREF9474_04074 [Clostridium symbiosum
WAL-14163]
gi|323692053|ref|ZP_08106300.1| seryl-tRNA synthetase [Clostridium symbiosum WAL-14673]
gi|355630337|ref|ZP_09050796.1| seryl-tRNA synthetase [Clostridium sp. 7_3_54FAA]
gi|323399659|gb|EGA92045.1| hypothetical protein HMPREF9474_04074 [Clostridium symbiosum
WAL-14163]
gi|323503853|gb|EGB19668.1| seryl-tRNA synthetase [Clostridium symbiosum WAL-14673]
gi|354818685|gb|EHF03152.1| seryl-tRNA synthetase [Clostridium sp. 7_3_54FAA]
Length = 425
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ ++ L LV +EL K +KE D LR +N +A ++
Sbjct: 2 LDLKFVRENPEIVKQNIKNKFQDSKLGLVDEVIELDAKNRAAKKEADDLRANKNKIAKQI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEG---LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ ++ + E K + E L LEE +L D++ + IPN+ P VP+G +
Sbjct: 62 GALMGQGKKDEAEEMKKQVAEQSARLAALEEQEKELGDKILKIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P + +F + H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQKYGEPVIPDFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+++ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTVIQEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSKM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 301 WFDKLWQNTVDLFRSLDVPVRTL 323
>gi|418418382|ref|ZP_12991568.1| seryl-tRNA synthetase [Mycobacterium abscessus subsp. bolletii BD]
gi|364002376|gb|EHM23567.1| seryl-tRNA synthetase [Mycobacterium abscessus subsp. bolletii BD]
Length = 418
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 178/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R R + L E++L+ D LR E+ A + K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRLRGEDPALVEVLLDADTARRAAISTADTLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ L + + E + V + + I N+ VP GGE +
Sbjct: 61 KATPEERPALLAAASELAAQVKSAEAEQVVTEAAFTEAHKAISNVVIDGVPAGGEQDFAL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
R+ VG P P KDH +LG++L +FD + A+VSG++FY+L +L++GL+ +
Sbjct: 121 RELVGEPQPIENP-KDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLLQLAVQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT L P +V+ ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 TAVANGFTLLIPPVLVKPEIMGGTGFLGAHAD-EVYHLEEDDLYLVGTSEVPIAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE+++ HE+++
Sbjct: 239 ILDLNSGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEVEHEKIL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
E + + + ++++
Sbjct: 299 GWERQMLGHIEVPYRVI 315
>gi|422939641|ref|ZP_16967017.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890284|gb|EGQ79434.1| serine--tRNA ligase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 421
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 178/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+ ++
Sbjct: 62 KKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P FNF K H+ +G+ L I DF+ A++SGS+F + A LE LIN+ L
Sbjct: 122 EIRKWGEPKKFNFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+++ E + L L ++++
Sbjct: 300 MVKNAETILQRLELPYRVI 318
>gi|381399804|ref|ZP_09924822.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
gi|380772867|gb|EIC06553.1| Seryl-tRNA synthetase [Microbacterium laevaniformans OR221]
Length = 426
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +RDN + V + + R + + ++ +E + LR +NA K
Sbjct: 2 IDLALLRDNPDLVKRSQQARGESPDTVDEAIEADRARRAAITAFEELRAAQNA-HGKTVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
++ L+ + K L + + ++ + + I N+ VP GGE+ +
Sbjct: 61 AAPKEDKPALVAQAKELSDRVKAAQQAVTAAEEAADAALARIENIVIDGVPAGGEENFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T G P+ F+F DH LG+ L D + +VSGS+FY+L LE L++ L
Sbjct: 121 VRTHGQPASFDFEPLDHLALGEKLGAIDMERGTKVSGSRFYFLTGIGARLEYALMSLALQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF P+ P +VR V+ GF + A+ +VY +E D L+GT+E+P+ G HM
Sbjct: 181 RAVDAGFIPMIPPTLVRPEVMRGTGFLGQHAD-EVYKLEADDLYLVGTSEVPLAGYHMGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + +YA +S C+R EAG+ G TRG+ RVHQF+KLEMFV+ PE++++ H L+
Sbjct: 240 ILDLTAGAKRYAGWSTCYRREAGSYGKDTRGIIRVHQFNKLEMFVYTTPEDAETEHLRLV 299
Query: 374 RIEEDLYSSLGLHFKLL 390
++E + LGL ++++
Sbjct: 300 ALQEQMLQDLGLSYRVI 316
>gi|326789959|ref|YP_004307780.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326540723|gb|ADZ82582.1| seryl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 427
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 179/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +R++ E V A + R+ N NL+ EL K + +EV+ + +NAV+ ++
Sbjct: 2 LDIKLLREDLEGVKAALAKRSGNYNLDEFTELDVKRRTLLQEVEAHKSRQNAVSKQIPAM 61
Query: 135 LEPSERQKLI-EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E I E K L + + L+ ++ ++ +++ +PN+ +P VPVG +D
Sbjct: 62 KKAGEDTTAIFAEMKQLSDEVKVLDAEVKEIDEKISNIVMRLPNLPNPLVPVGKDDTENF 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ +G P F+F +K H+ LG+ LDI DF+ AA+V+GS+F + K LE ++N+ L
Sbjct: 122 EMRKIGEPRNFDFEIKAHWDLGENLDILDFEKAAKVTGSRFVFYKGLGARLERAIMNFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K G+T + P +V + + G P+ + + D LI TAE+PV ++
Sbjct: 182 DMHVDKHGYTEVFPPLMVNRASMTGTGQLPK-FEEDAFKVVDTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL L +K+ A++ CFR EAG+AG TRG+ R HQF+K+EM F +PE+S E+
Sbjct: 241 DQILDGKDLVIKHCAYTPCFRAEAGSAGRDTRGIIRQHQFNKVEMVKFTKPEDSYDELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L ED+ +LGL ++++
Sbjct: 301 LTNDAEDILKTLGLPYRVV 319
>gi|330443906|ref|YP_004376892.1| seryl-tRNA synthetase [Chlamydophila pecorum E58]
gi|328807016|gb|AEB41189.1| seryl-tRNA synthetase [Chlamydophila pecorum E58]
Length = 424
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 175/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++SN +L+ +L L + + ++ + + L+ R A++ ++ K
Sbjct: 2 LDIKIIRKEPEKSELRLRRKDSNISLQPILTLDKTVRELKTQAEALQARRRALSEEIRKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + Q I+E + LEE L + L E +PN DVP + +
Sbjct: 62 KAQGEDAQAHIQEASKVASQQKDLEERLQENEALLHDEMSRLPNYPAEDVPDAPDKSGNR 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+ G P F+FP K+H +L KALDI DF + A+ +GS + KN V+LE L+ + L
Sbjct: 122 VIKSFGTPREFSFPPKNHLELNKALDILDFKSPAKTTGSGWPAYKNFGVLLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVGGIH 310
+ GF P +V+ ++ G P+ + Q Y +E D LI TAE+ + G H
Sbjct: 182 QKQRAHGFELWLPPLLVKKEILYGSGQIPK-FDGQYYRVEDGDHHLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+L+E LPL YAA + CFR EAGAAG+ RGL RVHQF K+EMF F P++ DS +
Sbjct: 241 SQELLNEKDLPLYYAACTPCFRREAGAAGSQERGLVRVHQFHKVEMFAFTTPDQEDSAYT 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ I E++ L L ++L L
Sbjct: 301 KMLDIVEEILIELELPYRLSLL 322
>gi|57234640|ref|YP_181319.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195]
gi|123618838|sp|Q3Z8Y0.1|SYS_DEHE1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|57225088|gb|AAW40145.1| seryl-tRNA synthetase [Dehalococcoides ethenogenes 195]
Length = 413
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 176/317 (55%), Gaps = 11/317 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V + RN++A ++ +LEL + +E+D LR +R +A +
Sbjct: 2 LDLKFIRENTELVRKAVAARNTDAPIDEILELDSCRRTLSQELDTLRAKRKIIAKQRD-- 59
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
+ IEEG+ L+ + LE L ++ ++L +PN+ VPVG ++ +++
Sbjct: 60 ------EAAIEEGRVLRGRISELETGLSEVEEKLTDRLLRVPNIPDASVPVGKDESENVV 113
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
G F+F K H++LG+ALDI DFD ++SGS+FY LK E L+ LI + L
Sbjct: 114 LYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLD 173
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K G+T + P +++ + G P+ A+ + E D + TAE P+ +H D
Sbjct: 174 LHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAE-EDYWWVPTAEAPLTNLHRD 232
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILS LP+ Y A++ CFR E +AG RG+ R+HQF K+E++ +C+PE+S E++
Sbjct: 233 EILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKM 292
Query: 373 IRIEEDLYSSLGLHFKL 389
+ E++ +L + ++L
Sbjct: 293 VADAEEIADALKIPYRL 309
>gi|296137899|ref|YP_003645142.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296026033|gb|ADG76803.1| seryl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 417
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 177/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R +A L + +LE D LR E + ++K G
Sbjct: 2 IDVKLLRENPDLVRASQRARGEDAALVDALLEADAHRRAAVLAADNLRAE-HKTSSKSIG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ L + E + + + + A+ I N+ VP GGED +
Sbjct: 61 KAAPEERPALVAAAGELAAKVKEAEAEQARADEVFDETARKIGNVIIEGVPAGGEDDFEV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P KDH +L + L + D + A+VSGS+FY++ + +M L+ +
Sbjct: 121 LEHVGTIPEITDP-KDHLELAEGLGLLDMERGAKVSGSRFYFMTGHGALFQMALLQLAVQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ + GFT + P +V+ ++ GF A+ ++Y +E D L+GT+E+P+ G HM
Sbjct: 180 KAVAHGFTLMIPPVLVKPEIMGGTGFLGAHAD-EIYRLEADDLYLVGTSEVPLAGYHMGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P++YAA S CFR EAG+ G TRG+ RVHQF K+EMFV+C+PE++++ H+ L+
Sbjct: 239 IIDLNDGPIRYAAQSSCFRREAGSYGKDTRGIIRVHQFDKIEMFVYCKPEDAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ +++ + ++++
Sbjct: 299 DFEKEMLAAVEVPYRVI 315
>gi|296119113|ref|ZP_06837685.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
gi|295967948|gb|EFG81201.1| serine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
Length = 419
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 175/317 (55%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R++ + V A+ R + L + +LE + D LR E+ A K+ G
Sbjct: 2 IDLKFLRESPDVVRASQVTRGEDPQLVDQLLEADAARRSAILAADELRAEQKAFGKKI-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ P ER L+E LK + EE + +++ + N+ P GGED I+
Sbjct: 61 QASPEERPALLEGSNELKTKVKEAEEAQREAEQQVETLQYKLSNVVE-GAPAGGEDDFIV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F KDH +LG++L + D A++ G++FYYL + L++ ++
Sbjct: 120 LEHYGEKPEFDFEPKDHLELGESLGLIDTKRGAKIGGARFYYLTGDGAFLQLSMMVLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GF+ + P +VR ++ GF ++ ++Y +E D L+GT+E+ + G H D
Sbjct: 180 KARAAGFSLMIPPVLVRPEIMAGTGFLGDHSD-EIYYLERDDLYLVGTSEVALAGYHKDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ S P++YA +S CFR EAG+ G TRG+ RVHQF K+EMF +C+PE+++ H +L+
Sbjct: 239 IIDLSEGPIQYAGWSSCFRREAGSHGKDTRGILRVHQFDKVEMFTYCKPEDAEKQHLQLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+E ++ ++ LH++++
Sbjct: 299 SMEREMLDAMNLHYRVI 315
>gi|443670916|ref|ZP_21136039.1| Seryl-tRNA synthetase [Rhodococcus sp. AW25M09]
gi|443416516|emb|CCQ14376.1| Seryl-tRNA synthetase [Rhodococcus sp. AW25M09]
Length = 417
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 179/317 (56%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R R + A ++ +L+ D+LR E+ A+ K G
Sbjct: 2 IDLKFLRENPDAVRASQRTRGEDPALVDALLDADASRRAAVLAGDQLRAEQKAL-GKQVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K +R L+ L + + + L + I N+ P GGED ++
Sbjct: 61 KASAEDRPALLAGASELAAKVKAAQATEAEADAALDTAHRAISNIVQDGTPAGGEDDFVL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG+ F+F KDH +LG+AL++ D + A+VSGS+FY++ +L+ GL+
Sbjct: 121 LETVGDLPEFDFEPKDHLELGEALNLIDMERGAKVSGSRFYFMTGYGALLQQGLLQLAAQ 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +K GFT + P +VR ++ GF A+ ++Y +E D L+GT+E+ + G H
Sbjct: 181 KAVKNGFTMMIPPVLVRPEIMSGTGFLGAHAD-EIYRLEADDLYLVGTSEVALAGYHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ + P +YA +S CFR EAG+ G TRG+ RVHQF K+EMF + +PE++ + H++L+
Sbjct: 240 IIDLADGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKIEMFSYIKPEDAAAEHQKLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E+++ +++ + ++++
Sbjct: 300 EFEKEMLAAVEVPYRVI 316
>gi|365868145|ref|ZP_09407698.1| seryl-tRNA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|397678343|ref|YP_006519878.1| serine--tRNA ligase [Mycobacterium massiliense str. GO 06]
gi|414582185|ref|ZP_11439325.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1215]
gi|418250439|ref|ZP_12876683.1| seryl-tRNA synthetase [Mycobacterium abscessus 47J26]
gi|420880308|ref|ZP_15343675.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0304]
gi|420886884|ref|ZP_15350244.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0421]
gi|420887058|ref|ZP_15350416.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0422]
gi|420895704|ref|ZP_15359043.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0708]
gi|420901055|ref|ZP_15364386.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0817]
gi|420907710|ref|ZP_15371028.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1212]
gi|420934297|ref|ZP_15397570.1| serine--tRNA ligase [Mycobacterium massiliense 1S-151-0930]
gi|420935297|ref|ZP_15398567.1| serine--tRNA ligase [Mycobacterium massiliense 1S-152-0914]
gi|420944557|ref|ZP_15407812.1| serine--tRNA ligase [Mycobacterium massiliense 1S-153-0915]
gi|420949509|ref|ZP_15412758.1| serine--tRNA ligase [Mycobacterium massiliense 1S-154-0310]
gi|420949846|ref|ZP_15413093.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0626]
gi|420958836|ref|ZP_15422070.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0107]
gi|420959678|ref|ZP_15422909.1| serine--tRNA ligase [Mycobacterium massiliense 2B-1231]
gi|420969758|ref|ZP_15432959.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0921]
gi|420994767|ref|ZP_15457913.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0307]
gi|420995732|ref|ZP_15458875.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-R]
gi|421000248|ref|ZP_15463381.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-S]
gi|421049074|ref|ZP_15512069.1| serine--tRNA ligase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|353449675|gb|EHB98071.1| seryl-tRNA synthetase [Mycobacterium abscessus 47J26]
gi|364001516|gb|EHM22711.1| seryl-tRNA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392082647|gb|EIU08473.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0421]
gi|392085217|gb|EIU11042.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0304]
gi|392093772|gb|EIU19568.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0422]
gi|392095016|gb|EIU20811.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0708]
gi|392098416|gb|EIU24210.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0817]
gi|392105614|gb|EIU31400.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1212]
gi|392117337|gb|EIU43105.1| serine--tRNA ligase [Mycobacterium abscessus 5S-1215]
gi|392132709|gb|EIU58454.1| serine--tRNA ligase [Mycobacterium massiliense 1S-151-0930]
gi|392146163|gb|EIU71887.1| serine--tRNA ligase [Mycobacterium massiliense 1S-153-0915]
gi|392146804|gb|EIU72525.1| serine--tRNA ligase [Mycobacterium massiliense 1S-152-0914]
gi|392150550|gb|EIU76263.1| serine--tRNA ligase [Mycobacterium massiliense 1S-154-0310]
gi|392164932|gb|EIU90619.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0626]
gi|392175696|gb|EIV01357.1| serine--tRNA ligase [Mycobacterium abscessus 5S-0921]
gi|392180869|gb|EIV06521.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0307]
gi|392191552|gb|EIV17177.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-R]
gi|392202402|gb|EIV27998.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0912-S]
gi|392240987|gb|EIV66477.1| serine--tRNA ligase [Mycobacterium massiliense CCUG 48898]
gi|392248562|gb|EIV74038.1| serine--tRNA ligase [Mycobacterium massiliense 2B-0107]
gi|392256890|gb|EIV82344.1| serine--tRNA ligase [Mycobacterium massiliense 2B-1231]
gi|395456608|gb|AFN62271.1| Serine--tRNA ligase [Mycobacterium massiliense str. GO 06]
Length = 418
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 178/317 (56%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K++R+N +AV A+ R R + L E++L+ D LR E+ A + K+ G
Sbjct: 2 IDLKFLRENPDAVRASQRLRGEDPALVEVLLDADTARRAAISTADTLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ L + + E + V + + I N+ VP GGE +
Sbjct: 61 KATPEERPALLAAATELAAQVKSAEAEQVVTETAFTEAHKAISNVVIDGVPAGGEQDFAL 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
R+ VG P P KDH +LG++L +FD + A+VSG++FY+L +L++GL+ +
Sbjct: 121 RELVGEPQPIENP-KDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLLQLAVQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ GFT L P +V+ ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 TAVANGFTLLIPPVLVKPEIMGGTGFLGAHAD-EVYHLEEDDLYLVGTSEVPIAGYHSGE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL + PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE+++ HE+++
Sbjct: 239 ILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEVEHEKIL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
E + + + ++++
Sbjct: 299 GWERQMLGHIEVPYRVI 315
>gi|304315564|ref|YP_003850709.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777066|gb|ADL67625.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 423
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 178/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA-NKMKG 133
+D K IR+N + V I + N+N++ LE+ EK + KE++ L+ RN + N K
Sbjct: 2 LDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRRGILKELESLKNTRNKESENIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + ++LI+E K + + + +E D+ + + L++ IPN+ H VPVG D +
Sbjct: 62 KREGKDAEELIKEMKEISDKIKAMESDVKQYDERLEELLWTIPNIPHESVPVGDSDADNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ F+F +K H+ +G L I DF+AA+ V+GS+F + K LE LI++ +
Sbjct: 122 EIRRWGDVRKFDFEIKPHWDIGVELGILDFEAASRVTGSRFTFYKGLGCRLERSLISFMM 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 182 DLHTEKHGYTEVFPPFMVHRRSMYGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
++I+ LP+ A+S CFR EAG+AG TRGL R HQF+K+E+ +PE S E+
Sbjct: 241 ETIIDAEELPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPERSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ ED+ +LG+ ++++
Sbjct: 301 MVNDAEDVLKTLGIPYRVV 319
>gi|295101875|emb|CBK99420.1| seryl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
Length = 442
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 178/334 (53%), Gaps = 19/334 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ---KEVDRLREERNAVAN-- 129
+D K++RDN +AV NI+ + +A L LV E+ EK + KEV+ L+ RN ++
Sbjct: 2 LDIKFVRDNPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRECLKEVETLKAARNKLSKAN 61
Query: 130 --------KMKGKLEPSERQKLIEEG----KNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
K + + +E Q I+ K + + LE + KL + +Q+ IP
Sbjct: 62 GPLFGQLKKCDDEAKKAELQAQIDANNAAVKADADKMAELEAEEAKLAERIQEIMYTIPQ 121
Query: 178 MTHPDVPVGGEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
M P VP+G +D ++ + G P V +FP+ H ++ ++ D D DAA V+G+ FYYL
Sbjct: 122 MIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYYL 181
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
L ++ + +I +GFT + P ++ +VV+ P + +Y IEG D
Sbjct: 182 LGNIARLHEAVLAYARDFMIDKGFTYVIPPFMMHGNVVQGVMSFPE-MDAMMYKIEGEDL 240
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LIGT+E + G +D L E+ LPL ++S CFR E GA G RG+YR+HQF K EM
Sbjct: 241 YLIGTSEHTMIGRFIDQTLDEAALPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEM 300
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V C+PEES ++E+L + +L+ S+ + + L
Sbjct: 301 IVVCRPEESADWYEKLWKNSVELFRSMEIPVRQL 334
>gi|167036460|ref|YP_001664038.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167038703|ref|YP_001661688.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300913738|ref|ZP_07131055.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307723246|ref|YP_003902997.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320114885|ref|YP_004185044.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687557|sp|B0K0Z5.1|SYS_THEPX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|238687674|sp|B0KAI8.1|SYS_THEP3 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166852943|gb|ABY91352.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855294|gb|ABY93702.1| seryl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300890423|gb|EFK85568.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307580307|gb|ADN53706.1| seryl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319927976|gb|ADV78661.1| seryl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 423
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 187/321 (58%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N EAV I + A+++ LEL EK + E++ L+ RN ++ + K
Sbjct: 2 LDVKRIRNNPEAVRIAIELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + LI E K L + + +E+++ ++ +EL++ IPN+ H VP+G ED
Sbjct: 62 KREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ LDI DF+AAA V+GS+F + K LE LIN+
Sbjct: 122 EIRRW-GEPRKFDFEPKPHWEIGQELDILDFEAAARVTGSRFTFYKGLGARLERALINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F +P++S E
Sbjct: 240 RDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLLL 391
++ R E++ +LGL +++++
Sbjct: 300 KMTRDAEEVLQALGLPYRVVV 320
>gi|154150976|ref|YP_001404594.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
gi|166222741|sp|A7I890.1|SYS_METB6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|153999528|gb|ABS55951.1| seryl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 425
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 176/322 (54%), Gaps = 8/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEK---MLNVQKEVDRLREERNAVANKM 131
++ +++R + + V A++ R + + V E+ K ++ + D LR RN +A ++
Sbjct: 2 LEIRFVRASPDVVKADLERRGTPEKIAWVDEILAKDARSRELKVQTDELRRRRNTIAREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + + L+ E L + + + + +++ ++ +PN+ H VP G +D
Sbjct: 62 NEARKTGKDAAPLLREAAELPQKIKANDAEQEEISGIIRTRLMRLPNILHESVPKGKDDT 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + VG P F+F +K+H QL DF+ AA+ SG+ FY+LK VML++ L
Sbjct: 122 ENVEIRRVGTPRTFDFELKNHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVGG 308
+ L + K+GFTP+ P +++ E G +V Y I+G D LI T+E P+
Sbjct: 182 FALDLLGKKGFTPVIPPFMIKRDSYE--GVTDLDDFEKVMYKIDGDDTYLIATSEHPIAA 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D I E LPL+ S CFR E GA G T+GL+RVHQF+K+E FVFC+PE S
Sbjct: 240 MYQDEIFEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFVFCRPENSWQI 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HEEL+ E++++ LGL + ++
Sbjct: 300 HEELLANAEEVFTKLGLPYHVV 321
>gi|419714079|ref|ZP_14241499.1| seryl-tRNA synthetase [Mycobacterium abscessus M94]
gi|382946018|gb|EIC70308.1| seryl-tRNA synthetase [Mycobacterium abscessus M94]
Length = 420
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 179/319 (56%), Gaps = 6/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVL---ELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N +AV A+ R R + L VL + + + D LR E+ A + K+
Sbjct: 2 IDLKFLRENPDAVRASQRLRGEDPALVEVLLDADTARRAAISTADTDTLRAEQKAASKKV 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
GK P ER L+ L + + E + V + + I N+ VP GGE
Sbjct: 62 -GKATPEERPALLAAASELAAQVKSAEAEQVVTEAAFTEAHKAISNVVIDGVPAGGEQDF 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+R+ VG P P KDH +LG++L +FD + A+VSG++FY+L +L++GL+
Sbjct: 121 ALRELVGEPHPIENP-KDHVELGESLGLFDMERGAKVSGARFYFLTGYGALLQLGLLQLA 179
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + GFT L P +V+ ++ GF A+ +VY +E D L+GT+E+P+ G H
Sbjct: 180 VQTAVANGFTLLIPPVLVKPEIMGGTGFLGAHAD-EVYHLEEDDLYLVGTSEVPIAGYHS 238
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL + PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PE++++ HE+
Sbjct: 239 GEILDLNNGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEAFVYCKPEDAEAEHEK 298
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E + + + ++++
Sbjct: 299 ILGWERQMLGHIEVPYRVI 317
>gi|312622837|ref|YP_004024450.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203304|gb|ADQ46631.1| seryl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 420
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 177/321 (55%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR N E V + RN + ++ +LEL E+ + EV+ L+ +N + ++ K
Sbjct: 2 LDLKYIRANPEKVQEGLSKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + L+ E K+L + + L+ + ++ DE++ IPN+ H VPVG +D +
Sbjct: 62 KKEGKDVTDLMNELKDLSDKIKELDCKVKEVEDEIENILLTIPNIPHESVPVGKDDTENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G F +K H+++G L I DF+ A++VSGS+F + + LE LIN+ L
Sbjct: 122 EVRRWGEVREPEFEIKPHWEIGINLGILDFERASKVSGSRFTFYRGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T L P +V + G P+ + + D LI TAE+PV H
Sbjct: 182 DLHIEKHGYTELFPPFLVVRKSMIGTGQLPKFEEDAFKTTD--DYFLIPTAEVPVTNYHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL E LP+KY A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S E+
Sbjct: 240 EEILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
L ED+ LGL ++++L
Sbjct: 300 LTADAEDVLKELGLPYRVVLL 320
>gi|403305225|ref|XP_003943168.1| PREDICTED: serine--tRNA ligase, mitochondrial isoform 3 [Saimiri
boliviensis boliviensis]
Length = 520
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 172/312 (55%), Gaps = 21/312 (6%)
Query: 97 NANLELVLELYEKMLNVQKEVDRLREERNAV--------ANKMKG-----KLEPSERQKL 143
+A+L ++ ++++ +++++ L EE+ AV AN+ G +L+P
Sbjct: 83 SADLPAIISTWQELRQLREQIRSLEEEKAAVTKAVQALLANRDHGEVQQVRLDPGTGSMF 142
Query: 144 IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVF 203
L L E +L +E +A +PN THPDVPVG E + + VG+ F
Sbjct: 143 GPAFLAFPGHLSPLVE--AQLEEEFYLQALRLPNQTHPDVPVGDESQARVLHVVGDKPAF 200
Query: 204 NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPL 263
+F + H ++G+ LDI + VSG + YYL+ +L+ GL+N+T ++++ RGFTP+
Sbjct: 201 SFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLHRGFTPM 260
Query: 264 TTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLL 320
T P+++R +V E CG P +Q+Y+I+ + D L GT+E+ + G MD ++ L
Sbjct: 261 TVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTSEVGLAGYFMDHSVAFRDL 320
Query: 321 PLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEED 378
P++ S C+R E G RGLYRVH F+K+EMF P E+S EE + ++ +
Sbjct: 321 PVRMVCSSTCYRAETN-TGKDPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLALQME 379
Query: 379 LYSSLGLHFKLL 390
+ + LGLHF++L
Sbjct: 380 ILTELGLHFRVL 391
>gi|433653770|ref|YP_007297478.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291959|gb|AGB17781.1| seryl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 423
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 178/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA-NKMKG 133
+D K IR+N + V I + N+N++ LE+ EK + KE++ L+ RN + N K
Sbjct: 2 LDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRREILKELESLKNTRNKESENIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + ++LI+E K + + + +E D+ + + L++ IPN+ H VPVG D +
Sbjct: 62 KREGKDAEELIKEMKEISDKIKAMESDVKQYDERLEELLWTIPNIPHESVPVGDSDADNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ F+F +K H+ +G L I DF+AA+ V+GS+F + K LE LI++ +
Sbjct: 122 EIRRWGDVRKFDFEIKPHWNIGVELGILDFEAASRVTGSRFTFYKGLGCRLERSLISFMM 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 182 DLHTEKHGYTEVFPPFMVHRRSMYGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
++I+ LP+ A+S CFR EAG+AG TRGL R HQF+K+E+ +PE S E+
Sbjct: 241 ETIIDAEELPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPERSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ ED+ +LG+ ++++
Sbjct: 301 MVNDAEDVLKTLGIPYRVV 319
>gi|336468998|gb|EGO57161.1| hypothetical protein NEUTE1DRAFT_66218 [Neurospora tetrasperma FGSC
2508]
gi|350288693|gb|EGZ69918.1| seryl-tRNA synthetase [Neurospora tetrasperma FGSC 2509]
Length = 552
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 201/410 (49%), Gaps = 42/410 (10%)
Query: 19 MFRPVTKTLGLISRRNHSQKPPFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFK 78
+FR T T + + R S R L + L ++ +A KP +D K
Sbjct: 23 VFRRPTTTTSIQTPRIASLHNSSRFLQQQQQQQQLSDSPAAASRPSIAPKP----VVDIK 78
Query: 79 WIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAV-------- 127
IR N + + N RN + A + + +L+ + Q+E LRE N +
Sbjct: 79 HIRQNPDLHAQNCIERNYHQQAAYPQRINDLHAQWQAKQREARSLRERSNILRRQLTDPG 138
Query: 128 ------ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHP 181
A+ + + R +LI E + LK L T+E + ++ E++ A IPN+T
Sbjct: 139 SIRDENADTIAAGTKFLTRDELIAEARKLKSLLSTIEAEETRILSEIESLALAIPNLTSE 198
Query: 182 DVPVGGED--CSIIRKTVGN-PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKN 238
+ P G E S+I + PS + + H +G L +FDF +A SG +Y+L +
Sbjct: 199 ESPRGPEPKLLSLINEHPEPVPSASDRVWRSHVHIGNELGLFDFASAGTTSGWGWYFLLD 258
Query: 239 EAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVYSI-EGAD 295
EA LE LI + L ++ G+ ++ P +V S + CGFQPR N TQ+Y++ + AD
Sbjct: 259 EAAQLEQALIAYALDLAVRSGWRQVSPPSMVYSHIASACGFQPRDQNGETQIYALAQSAD 318
Query: 296 QC--------LIGTAEIPVGGIHMDSIL-----SESLLPLKYAAFSHCFRTEAGAAGTAT 342
+ GT+EIP+ G+H +L PLKY A S C+R EAG+ G T
Sbjct: 319 DAARGKPELSMAGTSEIPLAGMHASKMLLCPGDISEFSPLKYVAVSRCYRAEAGSRGLET 378
Query: 343 RGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+GLYRVH+F+K+E+F + P + + E++ ++ DL SSLGLH ++L
Sbjct: 379 KGLYRVHEFTKVELFGWTYPSLDSATDVFNEIVDLQTDLLSSLGLHCRVL 428
>gi|417003423|ref|ZP_11942486.1| serine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325478615|gb|EGC81727.1| serine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 429
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 178/326 (54%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K +R+N + V NI+ + + L+LV L+L EK+ + + E D LR +RN + ++
Sbjct: 2 IDIKLLRENPDLVKENIKKKFQDDKLKLVDEVLDLDEKLRSFKTEGDNLRSQRNKTSKEI 61
Query: 132 -----KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
+GK + +E +KL+ K++ + L +E D K E+++ Q IP + VP+
Sbjct: 62 GALMAQGKKDAAEDAKKLV---KDINDKLEHIEADTEKFAAEVKKRMQVIPQIIDDTVPL 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G+P V + V H + ++ D D DAA E SG+ FYYL+ + L
Sbjct: 119 GKDDSENVEIEKYGDPVVPDHDVPYHIDIMESFDGVDLDAARETSGAGFYYLRGDIARLH 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
++++ +I RG+T P ++RS VV +Y IEG D LIGT+E
Sbjct: 179 SAILSYARDFMIDRGYTYYIPPFMIRSDVVTGV-MSFSEMEDMMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +++I E +PL+ ++S CFR E GA G RG+YR+HQF K EM + C+PE+
Sbjct: 238 SMIGKFINTITEEEKMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPED 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S +++EL D + SL + + L
Sbjct: 298 SKKFYDELWNNTVDFFRSLEIPVRTL 323
>gi|238019657|ref|ZP_04600083.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748]
gi|237863698|gb|EEP64988.1| hypothetical protein VEIDISOL_01531 [Veillonella dispar ATCC 17748]
Length = 426
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 175/319 (54%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D K++R+N + V N+ NR++ +LE + Y++ + +V+ L+ RN+V ++
Sbjct: 2 LDLKFVRENIDLVQQNLDNRHTKGDLETFVSAYDERRQLIGKVEELKALRNSVTEEISQL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K I E K + + + L+ + + +L+ A +PNM VPVG ED ++
Sbjct: 62 KRNKENADDKIAEMKKVGDDIAELDNRIRDVEAKLRDAALMLPNMCDASVPVGADEDENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F ++ H+ LG+ LDI DF+ A ++SG++F K LE LIN+ +
Sbjct: 122 EQRKWGEPRQFDFDIQAHWDLGENLDILDFNRAGKMSGARFTVYKGLGARLERALINFMV 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K+G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 182 DLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEDTEYFLIPTAEVTLTNYHS 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S E
Sbjct: 241 GEILSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSYKELET 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L F+++
Sbjct: 301 LTDNAEEVLRLLELPFRVI 319
>gi|403389638|ref|ZP_10931695.1| seryl-tRNA ligase [Clostridium sp. JC122]
Length = 424
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 185/322 (57%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N EA+ + +R N ++ ++ E L ++ ++ EV+ L+ +RN + K+
Sbjct: 2 LDLKKIRNNPEAIKTALNDRGENFDVSVIDEVVALDQRRRDILVEVEELKNKRNTDSAKI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K K E +++ E K L + + + +L ++ ++++ IPN+ HPDVP G D
Sbjct: 62 PKLKKEGLPVDEIMAEMKELADKIKGFDVELNEIDEKIKYIMLRIPNIPHPDVPNGDTDE 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K G P F+F K+H+ +G DI DF+A +++GS+F K LE +I+
Sbjct: 122 DNVEVKKFGEPRKFDFEPKEHWTIGTDRDILDFEAGGKITGSRFTVYKGLGARLERAIIS 181
Query: 250 WTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + V + G+T + P +V + + G P+ + + D LI TAE+PV
Sbjct: 182 FFLDKHVDENGYTEILPPYMVNRNSMIGTGQLPK-FEEDAFRVADTDYYLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D IL + LP+K+AA+S CFR EAG+AG TRGL R HQF+K+E+ F +PEES +
Sbjct: 241 LYKDEILDGAKLPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFVKPEESYAE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L++ E + +LGL ++++
Sbjct: 301 LEKLVKDAESVLQALGLAYRIV 322
>gi|392407162|ref|YP_006443770.1| seryl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620298|gb|AFM21445.1| seryl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 426
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 184/324 (56%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK--EVDRLREERNAVAN--- 129
+D KWIR+N + V + NR + L+ +L L L QK EV+ L+ +RN +
Sbjct: 2 LDIKWIRENPDEVRKMLENRGYDYPLDELLRL--DGLRRQKLIEVENLKAKRNEGSKEVA 59
Query: 130 KMKGKLE-PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-G 187
++K K E PS+ L+EE +++ E + L++++ ++ +L+ IPN H VPVG
Sbjct: 60 RLKSKGEDPSQ---LMEEIRSINETIKALDQEVQEIEGKLRDLLLQIPNRPHESVPVGKS 116
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
E+ +++ + VGN F+F K H++LG++L I DF+A +++GS+F L+ + L
Sbjct: 117 EEDNVVIRHVGNLPEFDFEPKPHWELGESLGIMDFEAGIKLAGSRFTVLRGYGSRMARAL 176
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ L + G+ P +V S +E G P+ AN +Y + D LI TAE+P+
Sbjct: 177 INFMLDLHTREHGYLEFEPPFLVNSKTMEGTGQLPKFAN-DLYHCDSDDLWLIPTAEVPL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
+H + IL E +LPL Y A++ CFR EAG+ G RG+ R HQF K+E+ C PE S
Sbjct: 236 TNMHAEEILEEDVLPLYYTAYTPCFRREAGSHGRDVRGMLRQHQFDKVELVKICTPESSY 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E+L R E++ LGL ++++
Sbjct: 296 DELEKLTRNAEEVLKRLGLPYRVV 319
>gi|350566911|ref|ZP_08935532.1| serine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
gi|348660729|gb|EGY77435.1| serine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
Length = 428
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 176/327 (53%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + L LV +E+ EK+ + + D LR +RN ++ ++
Sbjct: 2 LDIKFLRENPELVKENIKKKFQDEKLGLVDEVIEIDEKLRQEKIKGDDLRAQRNKISKEI 61
Query: 132 KGKLEPSERQKLIEEG-------KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+ QK IEE K + + LV +EED K EL++ IP + VP
Sbjct: 62 GALMA----QKKIEEAEATKAKVKEINDALVQIEEDTKKYEVELKERMLVIPQIIDESVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
VG +D + + G P V + V H ++ ++ D D DAA + SG+ FYYL+ + L
Sbjct: 118 VGKDDSENVEVERFGEPVVPKYEVPYHVEIMESFDGIDLDAARDTSGAGFYYLRGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
++++ +I RG+T P ++RS VV N +Y IEG D LIGT+E
Sbjct: 178 HSSILSYARDFMIDRGYTYYIPPFMIRSEVVTGVMSFAEMENM-MYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +++I E +PL+ ++S CFR E GA G RG+YR+HQF K EM + C+PE
Sbjct: 237 HSMIGKFINTITDEEKMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S +++ EL + D + SL + + L
Sbjct: 297 DSMNFYNELWKNTVDFFRSLEIPVRTL 323
>gi|260891941|ref|YP_003238038.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864082|gb|ACX51188.1| seryl-tRNA synthetase [Ammonifex degensii KC4]
Length = 427
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 179/327 (54%), Gaps = 15/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVL---ELYEKMLNVQKEVDRLREERNAVAN 129
+D K+IR E V +R R NL EL+ EK+ +Q+ LR E N V+
Sbjct: 2 LDLKFIRRQPEVVKEALRRRGYPENLVDELLAVDARWREKLTYLQE----LRSEHNRVSE 57
Query: 130 KM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-- 186
++ + K E +LI + L + + L +++ L ELQ+ IPN+ HP VP G
Sbjct: 58 EIARRKQAGDEAVELIAAMRELSDRIEDLAKEVGALERELQERLLEIPNIPHPSVPYGED 117
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
ED +R+ G P F+FP + H+++G+ + DF +V+G++F + + LE
Sbjct: 118 AEDNVEVRRW-GEPRRFSFPPRPHWEIGEITGVLDFARGVKVAGTRFVFYRGLGAALERA 176
Query: 247 LINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
LIN+ L + G+ + P +V + G P+ A ++ +EG D LI TAE+P
Sbjct: 177 LINFMLDLHTREHGYEEVFPPFLVNRESMVGTGQLPKFAE-DMFKVEGEDFYLIPTAEVP 235
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
V +H + IL LPLKY A+S CFR EAGAAG TRGL R HQF+K+E+ FC+PE+S
Sbjct: 236 VTNLHREEILDGGQLPLKYVAYSACFRAEAGAAGRETRGLIRQHQFNKVELVKFCRPEQS 295
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLLLF 392
+ E+L+ E++ LGL +++++
Sbjct: 296 EEELEKLVADAEEVLKRLGLPYRVVVL 322
>gi|406947592|gb|EKD78496.1| hypothetical protein ACD_41C00339G0004, partial [uncultured
bacterium]
Length = 402
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 178/319 (55%), Gaps = 20/319 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K+IR++ + V A ++N +++ ++ L +Q + D LR E+ A+
Sbjct: 2 IDIKFIREHADVVKAAATHKNVVVDVDAIITLDTTRKQLQTKHDMLRAEQRALGK----- 56
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SII 193
+ K L + +++++L ++ ++L+ +PN+ D P+G ++ + +
Sbjct: 57 ----------DGAKELSIKVKSIQKELTEVEEQLRVLLWTVPNIPTDDTPIGKDESQNQV 106
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G+ F+F K H++LG AL + D + AA+VSG++F YL +++ L + L
Sbjct: 107 VKQWGSQPQFDFQPKPHWELGSALGMIDNERAAQVSGARFTYLTGSLAVMQFALTQYVLQ 166
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCG-FQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++ +GF + P ++ V K P+ + Y I D LIG+AE +G IHMD
Sbjct: 167 LLVGKGFHLVVPPLFIKPEVFAKMARLHPK---EERYHIPSDDLYLIGSAEHTLGPIHMD 223
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE+ LP +Y A++ FR EAGAAG TRG+ R+HQF K+EM VF PE++ + H+ L
Sbjct: 224 EILSEAKLPKRYCAYTPAFRREAGAAGKDTRGILRLHQFDKIEMEVFSTPEQAMAEHQLL 283
Query: 373 IRIEEDLYSSLGLHFKLLL 391
+ IEE++ +L L ++LLL
Sbjct: 284 VSIEEEILQALALPYQLLL 302
>gi|323358560|ref|YP_004224956.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
gi|323274931|dbj|BAJ75076.1| seryl-tRNA synthetase [Microbacterium testaceum StLB037]
Length = 421
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVS-ANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R++ E V + I S +++ L + LR +NA ++
Sbjct: 2 IDLTLLREDPELVKRSQIARGESPDSVDEALAADRDRRAAITAFEELRAAQNAHGKRV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+ L+ E K L E + + + + I N+ VP GGE+ +
Sbjct: 61 QAPKEEKAALVAEAKQLSEQVKAAQHAVGEAEAAADAALAKIENIVLDGVPAGGEENFVT 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T G ++F +DH +LG+ L D + +VSGS+FY+L LE+ L+ L
Sbjct: 121 LRTHGEIPTYDFEPRDHLELGEMLGAIDMERGTKVSGSRFYFLTGIGARLELALMTLALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ GFTP+ P +VR V+ GF + A+ +VY + D L+GT+E+P+ G HMD
Sbjct: 181 RALQAGFTPMIPPTLVRPEVMRGTGFLGQHAD-EVYHLPKEDLYLVGTSEVPLAGYHMDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL +YA +S C+R+EAG+ G TRG+ RVHQF+KLEMFV+ P ++++ H+ L+
Sbjct: 240 ILDLERGAKRYAGWSTCYRSEAGSYGKDTRGIIRVHQFNKLEMFVYTDPADAEAEHDRLV 299
Query: 374 RIEEDLYSSLGLHFKLL 390
++E + LGL ++++
Sbjct: 300 AMQEAMLQDLGLAYRVI 316
>gi|163815000|ref|ZP_02206387.1| hypothetical protein COPEUT_01154 [Coprococcus eutactus ATCC 27759]
gi|158449683|gb|EDP26678.1| serine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 429
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 182/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ N L LV +EL ++ Q+E D LR +N +A ++
Sbjct: 2 IDIKFLRENPDVVKQNIKNKFQNDKLPLVDEVIELDKQARAAQQEADALRANKNTIAKQI 61
Query: 132 -----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK +E ++++ E LKE L TLE +L +++++ IPN+ P VP
Sbjct: 62 GSLMAQGKKAEAEEVKKQVAETSARLKE-LETLEPEL---KEKVKKIMMIIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F + H + ++L D D+A +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEVQRYGEPVVPDFEIPYHADIMESLGGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 178 HSAIISYARDFMIDRGFTYCIPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S + ++L + DL+ S+ + + L
Sbjct: 297 DSKMWFDKLWQNTVDLFRSMDIPVRTL 323
>gi|194701166|gb|ACF84667.1| unknown [Zea mays]
gi|195621762|gb|ACG32711.1| seryl-tRNA synthetase [Zea mays]
Length = 458
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 186/330 (56%), Gaps = 17/330 (5%)
Query: 75 IDFKWIRDNKEAVSANIR--NRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVAN 129
+D R +K IR R+ A++ELV E L + Q E+D++R+E NA +
Sbjct: 2 LDINLFRTDKGGNPDLIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATSK 61
Query: 130 KMKGKLEPS----ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
K+ GKL+ S E +KL+E +K+ L E ++ + L + I N+ H VPV
Sbjct: 62 KI-GKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKVTTIGNIVHESVPV 120
Query: 186 GGEDCS-IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
++ + I +T G V + +K+H L + LDI + A+V+G + +YLK+E V+L
Sbjct: 121 SDDEANNKIVRTFGEKRVED-NLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLN 179
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTA 302
+ LIN+ L+ + KRGF P+ TP +R + KC Q + ++Y + +G D+ LI T+
Sbjct: 180 LALINFGLAFLRKRGFKPMQTPFFMRKETMAKCA-QLAQFDEELYKVTGDGEDKYLIATS 238
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E P+ H+ + + LP+KYA +S CFR EAG+ G T G++RVHQF K+E F P
Sbjct: 239 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 298
Query: 363 EESDSY--HEELIRIEEDLYSSLGLHFKLL 390
+DS+ HEE+++ ED Y +GL ++++
Sbjct: 299 NGNDSWEIHEEMLKNSEDFYKEIGLPYQVV 328
>gi|169830232|ref|YP_001716214.1| seryl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|238688210|sp|B1I161.1|SYS_DESAP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169637076|gb|ACA58582.1| seryl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 425
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 184/324 (56%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN---KM 131
+D K+IR + EAV + R + +L+ +L+L ++ V+RL+ RNAV+ ++
Sbjct: 2 LDLKFIRKHPEAVRMALEKRGAEFDLDRLLDLDDEWRQKLFTVERLKNRRNAVSEEIARL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K EP+E +LI E +N+ + + L+ ++ ++ + LQ +PN+ HP VP G D
Sbjct: 62 KKAGEPAE--ELIAEMRNVSQQIRELDGEIRQVEENLQALLLQVPNIPHPLVPFGRADTD 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R+ G P F F + H++LG+ L+I DF +VSG++F + + LE LI
Sbjct: 120 NEEVRRW-GEPPAFGFEPRPHWELGEELNILDFARGGKVSGARFSFCRGAGARLERALIC 178
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L V + G+T L P +V + + G P+ A +Y +E D L+ TAE+PV
Sbjct: 179 FMLDLHVDRHGYTELFPPFLVNAQSMTGTGQLPKFA-ADMYKVENEDYYLVPTAEVPVTN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
D IL LP KYAA+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S+
Sbjct: 238 YLRDEILDGDTLPRKYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSEDE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLLLF 392
E+L+R E++ L L ++++L
Sbjct: 298 LEKLVRDAEEVLRLLRLPYRVVLL 321
>gi|289760001|ref|ZP_06519379.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis T85]
gi|289715565|gb|EFD79577.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis T85]
Length = 329
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 165/311 (53%), Gaps = 6/311 (1%)
Query: 65 VAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREE 123
+ VK A ID K +R+N +AV + +R + L + +L V D LR E
Sbjct: 1 MGVKSSLAAVIDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAE 60
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+ A A+K G P ER L+ K L E + E D V+ I N+ V
Sbjct: 61 QKA-ASKSVGGASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGV 119
Query: 184 PVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
P GGED + VG PS P KDH +LG++L + D A+VSGS+FY+L +L
Sbjct: 120 PAGGEDDYAVLDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALL 178
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTA 302
++GL+ L + GF P P +VR V+ GF GA+ + VY +EG L+GT+
Sbjct: 179 QLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTS 236
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E+P+ G H IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P
Sbjct: 237 EVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTP 296
Query: 363 EESDSYHEELI 373
+++ HE L+
Sbjct: 297 ADAEHEHERLL 307
>gi|406885893|gb|EKD33005.1| hypothetical protein ACD_76C00105G0008 [uncultured bacterium]
Length = 440
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 181/334 (54%), Gaps = 19/334 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID +R + E + +N+ +++ +L++ E++ +Q +V+ ++ E+N A+K+
Sbjct: 2 IDINILRKDPELIRTASKNKGHEIDVDAILKIDEQVRQLQGQVEAIKSEKNK-ASKLIAS 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
ER+KLI++ + L + L L ++ EL++ + IPN+ DVP+G E + +
Sbjct: 61 SAGKEREKLIKDMQELDKKSDKLIASLAPMSAELEKLLRMIPNIPAEDVPIGKNESENKV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT-- 251
+ VG P+VFNF DH +LG+ L I D A +VSG++F Y+K +E L+ +
Sbjct: 121 IRHVGEPTVFNFKPLDHVELGEKLGILDTKKAVQVSGARFVYIKGALARMESALVQYVYD 180
Query: 252 ----------LSEVIKRG-----FTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
+++ I+ G F P+ P ++R V+ + Y + D
Sbjct: 181 ILTSEPILKKIADSIEPGYSAKPFIPVVPPVMIRPDVMRDMARLSEADKDERYYLPQDDL 240
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L+G+AE +G +HM+ ILSE +P++Y FS FR EAG+ G T G+ RVHQF+KLEM
Sbjct: 241 YLVGSAEHTLGPLHMNEILSEEDMPIRYVGFSPAFRREAGSYGKDTHGMIRVHQFNKLEM 300
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F PE+S + + I+E L SLGL ++++
Sbjct: 301 ESFSLPEDSIKEQDFFVAIQEYLVQSLGLPYRVV 334
>gi|212637862|ref|YP_002314382.1| seryl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|212559342|gb|ACJ32397.1| Seryl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 426
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 179/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R + E V +++R + A+ E +L + + + + L+ +RN V+ ++
Sbjct: 4 LDLKFLRTHFEEVKQKLQHRGEDLADFERFEQLDRRRRELIAQAEELKNKRNDVSQQIAL 63
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + LI E + + + + L+++L ++ +L IPN+ H VP+G ED +
Sbjct: 64 LKREKKDADHLIAEMRQVGDRIKVLDDELREVEQQLDTLLLSIPNIPHESVPIGESEDDN 123
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G P F+F K H+++ L I DF+ AA+V+GS+F + K LE LIN+
Sbjct: 124 VEIRKWGEPRSFSFEPKPHWEIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINFM 183
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L V + G+ + P IV + + G P+ + IE D LI TAE+PV +H
Sbjct: 184 LDVHVEQHGYEEVLPPYIVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNLH 242
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP+KYAA+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 243 RDEILSADDLPIKYAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 302
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + LGL ++++
Sbjct: 303 KLTNDAERILQLLGLPYRVM 322
>gi|303228838|ref|ZP_07315651.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|401680291|ref|ZP_10812211.1| serine--tRNA ligase [Veillonella sp. ACP1]
gi|302516458|gb|EFL58387.1| serine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|400218616|gb|EJO49491.1| serine--tRNA ligase [Veillonella sp. ACP1]
Length = 426
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 178/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D K++R+N E V N+ NR++ +L+ + Y++ + ++V+ L+ RN+V ++
Sbjct: 2 LDLKFVRENLELVKQNLDNRHTKGDLDTFVAAYDERKQLIQKVEELKALRNSVTEEISQL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K I E K + + + L+ + ++ + L+ A +PNM VPVG ED ++
Sbjct: 62 KRNKENADDKIAEMKRVGDEISELDGRIREVEESLRNAALMLPNMCDASVPVGADEDENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F K H+ +G+ LDI DF+ A ++SG++F K LE LIN+ +
Sbjct: 122 EQRKWGEPRQFDFEPKAHWDIGEELDILDFNRAVKMSGARFTVYKGLGARLERALINFMV 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K+G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 182 DLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVENTEYFLIPTAEVTLTNYHS 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S + E+
Sbjct: 241 GEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLSKPEDSWNELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L F+++
Sbjct: 301 LTDNAEEVLRLLELPFRVI 319
>gi|295695170|ref|YP_003588408.1| seryl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295410772|gb|ADG05264.1| seryl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 428
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IR + + V R++ + +++ +LE+ E+ + +++ LR +RN +K
Sbjct: 2 LDIQYIRRHPDRVQKAARDKGISFDVQDLLEVDERRRQLLGQIEELRAQRNQ-KSKRTPT 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L+ E+Q I E + L E + LE++L + + ++ P + DVPVG D +
Sbjct: 61 LQGEEKQLNIAEVRQLNERIKGLEDELDTVKNRYEELMLRAPAVPFDDVPVGESDADNVE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G +F+FPV+DH LG+ D+ D +++GS+ Y+LKNEA +L +I +
Sbjct: 121 VRREGQAPIFSFPVRDHVTLGEMHDLIDIPRGVKIAGSRMYFLKNEAALLHRAVIQLAVD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GFTP+ P +VR + G+ P G Q Y I + L+GTAE+P+ + D
Sbjct: 181 HLVAKGFTPMIVPVMVRDRAMFGTGYFPLGKE-QTYVIPEDELNLVGTAEVPLVSYYADE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEE 371
+LSE LP + S+CFR E G+AG TRGLYRVHQF+K+E V + +E+ H E
Sbjct: 240 VLSEEELPKRMLGISNCFRREVGSAGKDTRGLYRVHQFTKVEQVVITRADGDEAMRLHWE 299
Query: 372 LI 373
L+
Sbjct: 300 LL 301
>gi|219848336|ref|YP_002462769.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|254783016|sp|B8G8S1.1|SYS_CHLAD RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|219542595|gb|ACL24333.1| seryl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 426
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 180/325 (55%), Gaps = 4/325 (1%)
Query: 75 IDFKWIRDNKEAVSANI-RNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K IR+ + V + R A ++ VL E+ + EV+ + ERNAV+ ++
Sbjct: 2 LDIKLIREQPDEVKRQLARCGVDGAIIDQVLAFDEQRRRLIYEVETRKAERNAVSKQIGA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ +ERQ IE + L + + L+ L + ++ + I N+ HPDVP G E ++
Sbjct: 62 MKDQAERQAKIEAMRRLGDEIAELDRQLAAVEEQQRAAMLEIRNLPHPDVPDGVDEHDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G FP + H++LG+AL I DF+ +++GS+FY ++ L+ +I W L
Sbjct: 122 VVYQEGEERQLPFPARPHWELGEALGILDFERGVKLAGSRFYVMRGAGARLQRAVIQWLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+++G+ + TP +V+ SV+ G P+ + +Y E + L+ TAE+P+ G++ D
Sbjct: 182 DLHLRQGYQEIYTPFVVKESVLWASGQLPKFRDN-LYRDEESGLWLVPTAEVPLTGLYAD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S LP+ +AA++ CFR E +AG RG+ R HQF K+EM++F +PEES E+L
Sbjct: 241 EILEASQLPIYHAAYTPCFRKEQLSAGRDVRGIKRGHQFDKVEMYMFVKPEESYQALEKL 300
Query: 373 IRIEEDLYSSLGLHFKL-LLFLAEL 396
R E+ LGL F+ LL A+L
Sbjct: 301 RRDAEECARLLGLPFRTKLLCTADL 325
>gi|408501516|ref|YP_006865435.1| seryl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
gi|408466340|gb|AFU71869.1| seryl-tRNA synthetase [Bifidobacterium asteroides PRL2011]
Length = 428
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 180/325 (55%), Gaps = 15/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++I+++ + V + R R + L + VL+ + ++ + R E+ + +M G
Sbjct: 2 LDIRFIQEHPDVVRESQRKRGESVELVDEVLKADSERRAALQDYESRRAEQKTLGKRM-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGL----VTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED 189
P E+ L+ K+L + + ++ + TD + + N+ P+ P GGED
Sbjct: 61 SASPDEKANLLARTKSLSDKVNACKAASDDANARYTDLMWK----FSNVVEPEAPEGGED 116
Query: 190 CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
++ K VG P F F K+H LG + D +VSGS+FY+L+ + LE+
Sbjct: 117 DYVVVKKVGTPRDFAKEGFEPKNHLDLGVGVAGIDMRRGVKVSGSRFYFLRGDVARLEIA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIP 305
++ + + ++ GF P TP +VR V+ GF A+ ++Y + E DQ L+GT+E+
Sbjct: 177 MLTMAVDQAMEHGFIPTITPTLVRPEVMAGTGFLNAHAD-EIYRLREPDDQYLVGTSEVS 235
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G+H D IL S PL+Y +S C+R EAG+AG T G+ RVHQF K+EMFV+C+ E+S
Sbjct: 236 LAGMHEDEILDLSKGPLRYCGWSSCYRREAGSAGKDTMGIIRVHQFDKVEMFVYCKQEDS 295
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
H++L+ +E+++ + + + ++++
Sbjct: 296 RDQHQQLLAMEQEMLAKVDVPYRII 320
>gi|88603748|ref|YP_503926.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|121721452|sp|Q2FS27.1|SYS_METHJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|88189210|gb|ABD42207.1| seryl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 425
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 177/322 (54%), Gaps = 8/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK---EVDRLREERNAVANKM 131
+D +++R N +A+ +++ RN L + +L + + ++ + + LR RN+++ +
Sbjct: 2 LDIRFVRANPDAIREDLKKRNDMEKLAWIDDLLVQDIRHRELIGQTNELRRRRNSISYDI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ K + LI E L + E ++ +++ +++ IPN+ H VPVG +D
Sbjct: 62 NRAKKAGEDASALIAEAAGLPGRIKENEAEMEEISKKIRYYLMRIPNILHESVPVGADDT 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ K G P F F +K+H QL D DF+ A + SG+ FY+LK V+L++ L
Sbjct: 122 QNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKTSGAGFYFLKGNLVLLDLALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIV-RSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
++L ++++G+TP+ P ++ R S E +Y IE D LI T+E P+
Sbjct: 182 FSLDILMEKGYTPIIPPYMINRKSYEEVTDLD--DFEKVMYKIEDDDAYLIATSEHPMAA 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D I E LPL+ A S CFR E G+ G T+GL+RVHQF K+E FV+C P++S +
Sbjct: 240 MYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPDDSWTI 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
HEEL E+++ L + ++++
Sbjct: 300 HEELRENAEEIFQKLEIPYRVV 321
>gi|336429184|ref|ZP_08609152.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336003100|gb|EGN33191.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 425
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N EAV NI+ + ++ L LV +EL ++ Q+E D LR RN ++ ++
Sbjct: 2 IDIKFLRENPEAVKENIKKKFQDSKLSLVDEVIELDKESRQTQQEADDLRASRNKISKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEG---LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G ++ ++++ + + G L LEE +L +++ + IPN+ P VP+G +
Sbjct: 62 GGLMKDGKKEEAEAKKAEVAAGAKRLAELEEKETELQEKITKIMMLIPNIIDPSVPIGKD 121
Query: 189 DCSIIRKT-VGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + T G P V +F + H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DTENVEITKYGEPVVPDFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTIVPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ S+ + + +
Sbjct: 301 WFDKLWQNTVDLFRSMDIPVRTI 323
>gi|406977395|gb|EKD99566.1| hypothetical protein ACD_22C00234G0025 [uncultured bacterium]
Length = 426
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 183/323 (56%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLEL--VLELYEKMLNVQKEVDRLREERNAVANKMK 132
+D K+IR+N E V + ++ + +++ +LEL K L++ ++V+ R RN ++ +
Sbjct: 2 LDIKYIRENPEVVKKGVIDKQLSKTIDIDKLLELDAKYLDLLRKVEIHRSLRNKLSEDI- 60
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED-CS 191
K+E +ER+KLI+E +K L +E L L ++ + +PN DVPVG D +
Sbjct: 61 SKVEGAEREKLIKEATGVKTELADMETHLKDLKTKIDEMLLWVPNPPAEDVPVGENDEGN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ + G P+ F+F K+H LG L I D + A+V+G + YYLK + MLE L+ +
Sbjct: 121 VVVRKEGIPAEFSFTPKEHLDLGTELGIIDTERGAKVAGFRGYYLKGDGAMLEQALLKYA 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ ++++GF ++ P +V+ G+ P G + + D LIGTAE+P+ +
Sbjct: 181 IDFMVEKGFELMSVPAMVKPEFFTGTGYFPWGDEDHYKTQD--DMALIGTAEVPLTAYYA 238
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE--SDSYH 369
+L+E LP+K+ S FR E G+ G T+G++RVHQ K+E V +E S ++H
Sbjct: 239 GEVLNEDDLPIKFVGRSPGFRREIGSYGKDTKGVFRVHQIDKVEQVVLLPADEKLSIAWH 298
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
E+++ E+L SLG+ ++++L
Sbjct: 299 EKMLGNAEELLKSLGIAYQVVLM 321
>gi|342218316|ref|ZP_08710933.1| serine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341590056|gb|EGS33306.1| serine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 425
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 181/323 (56%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN---KM 131
+D K++R+N EAV N++NRN++ +++ + L + ++ +EV+ ++ +RN V K+
Sbjct: 2 LDAKFVRENVEAVKENVKNRNAHVDIDAFVTLDGQRRSLIQEVEAMKNKRNTVTQQIAKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K E ++ + I K L E + L++ L ++L+Q IPNM H VPVG +D
Sbjct: 62 KQNHENADAE--ITAMKKLGEQIAELDQKLHATEEQLRQVQLMIPNMCHSSVPVGKDDQD 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
IRK PS F+F VK+H+++G+ L I D + AA+V+G++FYY LE L N
Sbjct: 120 NPEIRKWGILPS-FDFTVKNHWEIGEQLGILDAERAAKVTGARFYYYMGMGARLERALYN 178
Query: 250 WTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQCLIGTAEIPVG 307
+ L + K G+T + P IV + G P+ + +EGA+ LI TAE+P+
Sbjct: 179 FMLDQHTEKDGYTEVIPPYIVNKDSMTGTGQLPKFEEDMYALQVEGANMYLIPTAEVPLT 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ I+ + LP+ + A + CFR EAG+AG TRGL R HQF K+EM + PE S
Sbjct: 239 NYYRGEIIDAAKLPISFTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYTTPETSYD 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L E + +L L ++++
Sbjct: 299 ELEKLTNHAEGILKALQLPYRVV 321
>gi|288919017|ref|ZP_06413358.1| seryl-tRNA synthetase [Frankia sp. EUN1f]
gi|288349557|gb|EFC83793.1| seryl-tRNA synthetase [Frankia sp. EUN1f]
Length = 420
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 170/319 (53%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IRDN +AV +R + + +++ +L L ++ +Q EVD + R + A + K
Sbjct: 2 LDKRFIRDNPDAVKDAVRLKGVDLDVDELLALDQENRKLQFEVDEAQARRKSFAKQF-AK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+ + R +L E L L E L + + L + P + PVG E +++
Sbjct: 61 ADEARRAELRAEHVEFDRQLQDLRERLAQTSARLSELMLLAPGIPWEGAPVGPDESANVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+FP DH +L + +F A V+G + Y L + VMLE + ++ L
Sbjct: 121 IRTVGTRPEFDFPPLDHTELAEKRGWAEFARARRVAGERAYALVGDMVMLERAVHSYALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +R FTP+ P +V+ + + G P+G + ++Y I D L GTAE+ + G+H
Sbjct: 181 LLRERDFTPVAVPALVKEAPLVGTGMFPKGRD-EIYEIPADDAFLAGTAEVALVGLHSGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC--QPEESDSYHEE 371
IL LP++YA S CFR E G+A RGL RVHQF K+E FV C P ES +H E
Sbjct: 240 ILDAGQLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCVNDPAESARWHAE 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + + LGLH++++
Sbjct: 300 LLATAERILTDLGLHYEVV 318
>gi|433644025|ref|YP_007289784.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
gi|432160573|emb|CCK57900.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070008]
Length = 419
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 170/318 (53%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV + +R + L + +L V D LR E+ A A+K G
Sbjct: 2 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG+AL + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGEALGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|422011787|ref|ZP_16358563.1| serine--tRNA ligase [Actinomyces georgiae F0490]
gi|394763887|gb|EJF45897.1| serine--tRNA ligase [Actinomyces georgiae F0490]
Length = 424
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 171/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E + R R ++ L + ++E K +E + LR + V +K G
Sbjct: 2 IDVRALRENPEPARDSQRARGADPGLVDEIIEADAKRRGALQEFESLRATQKEV-SKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED-CSI 192
+ ER ++ + K L E + E E + A+ +PN+ VP GGED ++
Sbjct: 61 RASKEERPAILAKAKELAEQVKAAEARAGAADAEADRLARQLPNLVLDGVPRGGEDDYAV 120
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R P F F KDH LG+ LD D A+VSG++FYYLK LE+ L++
Sbjct: 121 LRHEGPAPRDFAAEGFEPKDHLALGEGLDAIDMKRGAKVSGARFYYLKGVGARLELALMS 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + + GF P+ TP +V ++ GF ++ ++Y + D L GT+E+ + G
Sbjct: 181 MALDQAHRAGFVPMMTPTLVSPQIMGGTGFLGEHSD-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE++++ H
Sbjct: 240 HADEILDLGDGPKRYLGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAEAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 300 MRFLAWEEEMLAKAELPYRVI 320
>gi|397669142|ref|YP_006510677.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
gi|395143730|gb|AFN47837.1| serine--tRNA ligase [Propionibacterium propionicum F0230a]
Length = 423
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 171/322 (53%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELY---EKMLNVQKEVDRLREERNAVANKM 131
ID K +R + + V + R + +ELV EL E + DRLR E+ + ++
Sbjct: 2 IDPKLLRTDPDLVRRSQEARGDS--VELVDELVSADEARRSGIATHDRLRAEQKEL-GRL 58
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K + ER +L+ K L + +E + + + N+ VP GGED
Sbjct: 59 IPKAQGDERTELLARTKQLAADVKAAQEQSEAAGERFNELIMQLGNIVIDGVPRGGEDDG 118
Query: 192 IIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
++ +TVG P F F KDH +LG+AL D + ++SGS+FY L LE L+
Sbjct: 119 LVIETVGVPRDFAAEGFEPKDHLELGEALGAIDMERGTKISGSRFYVLTGIGARLEFALL 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
N +++ ++ GFT + P +V+ + GF + A VY + D L+GT+E+ +
Sbjct: 179 NLAMTKAVEWGFTAMIPPALVKPEAMAGTGFLGQAAK-DVYHLSTDDLYLVGTSEVALAA 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL LP +YAAFS CFR EAG+ G TRG++RVH F K+EMF+ C PE+++ +
Sbjct: 238 FHSDEILDADSLPRRYAAFSPCFRREAGSYGKDTRGIFRVHWFDKVEMFIHCLPEDAEDW 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H+ L+ E++ +L + F++L
Sbjct: 298 HQRLLGFEKEFLQALEIPFQVL 319
>gi|333895889|ref|YP_004469763.1| seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111154|gb|AEF16091.1| Seryl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 423
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 179/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA-NKMKG 133
+D K IR+N + V I + N+N++ LE+ EK + KE++ L+ RN + N K
Sbjct: 2 LDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRREILKELESLKNTRNKESENIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + +LI+E K + + + +E ++ + ++L++ IPN+ H VPVG D +
Sbjct: 62 KKEGKDADELIKEMKEISDKIKAMESEVKQYDEKLEELLWTIPNIPHESVPVGDSDADNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G+ F+F VK H+ +G L + DF+AA+ V+GS+F + K LE LIN+ +
Sbjct: 122 EIRRWGDVREFDFEVKPHWDIGVELGLLDFEAASRVTGSRFTFYKGLGCRLERALINFMM 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 182 DLHTEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
++I+ LP+ A+S CFR EAG+AG TRGL R HQF+K+E+ +PE+S E+
Sbjct: 241 ETIIDSEKLPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPEKSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ ED+ +LG+ ++++
Sbjct: 301 MVSDAEDVLKTLGIPYRVV 319
>gi|333977518|ref|YP_004515463.1| seryl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333820999|gb|AEG13662.1| Seryl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 424
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 180/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R N E V + R + +LE LEL K V++L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRSNPELVKEALEKRGAGLSLEPFLELERKRREKLVVVEQLKNKRNVVSEEIGRR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E +++++E + + + L+E++ L +++Q IPN+ H VPVG + +
Sbjct: 62 KKAGEDAEEMVQEMRQVSARIKELDEEIRDLEEQIQVTLLNIPNIPHESVPVGKDAADNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+FP + H++LG+ LDI DF+ A+V+G++F + K LE +IN+ L
Sbjct: 122 EVRRWGEPRPFDFPPRAHWELGENLDIIDFERGAKVAGARFSFYKGAGARLERAVINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ G+ + P IV + G P+ A ++ +EG + LI TAE+PV I+
Sbjct: 182 DLHTREHGYMEVFPPFIVNGDSMIGTGQLPKFAE-DMFKLEGKNFYLIPTAEVPVTNIYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S + E+
Sbjct: 241 EEILPGERLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSYAELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E + LGL ++++
Sbjct: 301 LTADAERVLQLLGLPYRVV 319
>gi|240143768|ref|ZP_04742369.1| serine--tRNA ligase [Roseburia intestinalis L1-82]
gi|257204237|gb|EEV02522.1| serine--tRNA ligase [Roseburia intestinalis L1-82]
gi|291537259|emb|CBL10371.1| seryl-tRNA synthetase [Roseburia intestinalis M50/1]
gi|291539204|emb|CBL12315.1| seryl-tRNA synthetase [Roseburia intestinalis XB6B4]
Length = 429
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 181/326 (55%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N E V NI+N+ + L LV +EL K VQ+E D LR RN ++ ++
Sbjct: 2 IDLKFLRENPEVVKQNIKNKFQDHKLPLVDEVIELDAKARAVQQEADDLRASRNKLSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK + +E K + L LEE +L +++ + IPN+ P VP+G
Sbjct: 62 GQLMGQGKKDEAEAVKAQVNANAAR--LAELEEQEKELQEKVTRIMMTIPNIIDPSVPIG 119
Query: 187 GED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D C++ + G+P V +F + H + + + D DAA +V+G+ FYYL + L
Sbjct: 120 KDDSCNVEIEKFGDPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT + P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYVIPPFMIRSNVVTGVMSFDEMDA--MMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S +++++L + DL+ SL + + L
Sbjct: 298 SKTWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|357053216|ref|ZP_09114316.1| seryl-tRNA synthetase [Clostridium clostridioforme 2_1_49FAA]
gi|355385983|gb|EHG33027.1| seryl-tRNA synthetase [Clostridium clostridioforme 2_1_49FAA]
Length = 429
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANK- 130
+D +++R+N + V NI+N+ ++ L LV + L + QKE D LR RN ++ +
Sbjct: 2 LDLRFVRENPDIVKQNIKNKFQDSKLPLVDEVISLDTEARATQKEADDLRASRNKLSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E + + +E L LEE +L++++ + IPN+ P VP+G +
Sbjct: 62 GMLMGQGKRDEAETVKQEVNANSARLAELEEKEGQLSEKITKIMMTIPNIIDPTVPIGRD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H + + + D DAA V+G+ FYYL + L +
Sbjct: 122 DSENVEVERFGEPVVPDFEIPYHTDIMERFNGIDLDAARRVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E LPL ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTITPEQQLPLTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 301 WYDKLWQNTVDLFRSLDVPVRTL 323
>gi|154508150|ref|ZP_02043792.1| hypothetical protein ACTODO_00644 [Actinomyces odontolyticus ATCC
17982]
gi|153797784|gb|EDN80204.1| serine--tRNA ligase [Actinomyces odontolyticus ATCC 17982]
Length = 425
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 173/331 (52%), Gaps = 27/331 (8%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELV---------LELYEKMLNVQKEVDRLREE 123
ID + +R+N E A+ R R +N L E++ L+ +E + QKEV
Sbjct: 2 IDVRALRENPEPARASQRARGANPGLVDEIIEADAARREALQAFETLRATQKEV------ 55
Query: 124 RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+K G+ ER ++ + K L E + E + + A+ +PN+ V
Sbjct: 56 -----SKSVGRASKEERPAILAQAKELAEQVKAAEAAANAADADADRLARLLPNLVVDGV 110
Query: 184 PVGGEDCSIIRKTVG-NPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
PVGGED ++ + G P F F +DH LG+ LD D A+VSG++FYYLK
Sbjct: 111 PVGGEDDFVVLRHEGPAPRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGI 170
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ L+ + + + GF P+ TP +V V+ GF ++ ++Y + D L
Sbjct: 171 GARLELALMTMAMDQALANGFVPMMTPTLVTPQVMGGTGFLNEHSD-EIYYLPADDLYLT 229
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +
Sbjct: 230 GTSEVALAGYHADEILDLSGGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSY 289
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE++ H+ + EE++ + + L ++++
Sbjct: 290 CRPEDAAEEHQRFLAWEEEMLAKVELPYRVI 320
>gi|154483909|ref|ZP_02026357.1| hypothetical protein EUBVEN_01615 [Eubacterium ventriosum ATCC
27560]
gi|149735400|gb|EDM51286.1| serine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 427
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 179/322 (55%), Gaps = 8/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K +R+N E V + RN +L L +L EK N+ EV+ L+ E+NA + + +
Sbjct: 2 LDIKLLRNNFEEVEKALSTRNEEFDLSLFKDLDEKRRNLLGEVEALKAEQNATSKLIPQY 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GEDCS 191
K E + ++ E K + E + TL +L K ++L +PN+ +P VP G ED
Sbjct: 62 KKEGKDVAPIMAEMKEISEKVKTLNGELSKAEEDLNNYMLTLPNIPNPTVPQGMTDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IRK G P+ F+F K H+ LG L I D + AA++SGS+F ++ LE ++N+
Sbjct: 122 EIRK-FGEPTKFDFEPKAHWDLGADLGILDPETAAKISGSRFTVYRDLGAKLERAIVNFF 180
Query: 252 L-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIPVGG 308
L + K G+T + P +V + G P+ Y + +G + L+ TAE+PV
Sbjct: 181 LDTHTTKHGYTEVFPPFMVSRESMTGTGQLPK-FEEDAYKVQGDGKEYFLVPTAEVPVTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ + IL S LP+ + A++ CFR EAG+AG TRGL R HQF+K+E+ FC+PE S
Sbjct: 240 MYRNQILDGSKLPIMHCAYTACFRAEAGSAGRDTRGLIRQHQFNKVELVKFCKPETSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L R ED+ LGL ++++
Sbjct: 300 LEKLTRDAEDVLQMLGLPYRVV 321
>gi|410478026|ref|YP_006765663.1| seryl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
gi|124516121|gb|EAY57629.1| Seryl-tRNA synthetase [Leptospirillum rubarum]
gi|406773278|gb|AFS52703.1| seryl-tRNA synthetase [Leptospirillum ferriphilum ML-04]
Length = 445
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 177/326 (54%), Gaps = 15/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D + I + EA + +R ++ ++ VLE +++ +++K + LRE RN ++ ++ +
Sbjct: 2 LDIRRILSDTEACRKALLDRKTDIPIDAVLEEEKELSSLRKRWESLRETRNRLSEEIGRK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS-- 191
K E L+EE +++ + +E+DL+K + L++ IPN+ HP VPVG ++ +
Sbjct: 62 KRVGEETAPLMEESRSVNAEIALIEQDLLKREEALRERLLLIPNIPHPSVPVGPDETANR 121
Query: 192 -IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ RK G+P F H+++G L I DFD AA +SGS+F L E LE L +W
Sbjct: 122 EVHRK--GSPREFPVSPLPHWEIGNRLGILDFDRAAVLSGSRFSVLTGEGARLERALTSW 179
Query: 251 TLSEVIKRG--------FTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L G +T ++ P +VR ++E G P+ + + I + LI TA
Sbjct: 180 MLDTHTASGRTRRSGKAYTEVSVPLLVRPEMMEGTGQFPK-FREESFQIPEDNLVLIPTA 238
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E+PV ++ DSIL LPLKY A + CFR EAGAAG TRGL R HQF K+E+ P
Sbjct: 239 EVPVTNLNRDSILEAEDLPLKYVASTTCFRREAGAAGKDTRGLIRQHQFQKVELVWLTSP 298
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFK 388
+ S EEL + E + LGL F+
Sbjct: 299 DTSYDDLEELTQDAEQILEGLGLPFR 324
>gi|284047518|ref|YP_003397857.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283951739|gb|ADB46542.1| seryl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 426
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 182/322 (56%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K++RDN E V+ ++NR++ +LE +L ++ ++ +EV+ + +RN V+ ++M
Sbjct: 2 LDLKFVRDNTEKVAQALKNRHAKVDLEEFKKLDQERRSLLQEVEADKSQRNTVSAEISQM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K E + + I + L + + ++ + + LQ IPNM DVPVG +D
Sbjct: 62 KRNGEDATEK--ITAMRALGDKIAEADKKVKDVEARLQAVMLTIPNMPAADVPVGKDDTE 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+RK G P+ F+F K H+++G+ L I D + AA+VSG++FYY K LE + N
Sbjct: 120 NPEVRKW-GEPTHFDFEPKAHWEIGEKLGILDAERAAKVSGARFYYYKGAGARLERAVYN 178
Query: 250 WTLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + ++ G+ + P IV ++ + G P+ + +Y +EG D LI TAE+P+
Sbjct: 179 FMLDQHTRKDGYMEVIPPYIVNTASMTGTGQLPK-FHEDMYKVEGQDMYLIPTAEVPLTN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+ IL+ LP+ A + CFR EAG+AG TRGL R HQF K+EM FC+PE S
Sbjct: 238 YYRGEILNGDDLPIYLTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKFCKPETSYDE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L+ ED+ +L L + ++
Sbjct: 298 LEKLVGNAEDILKALKLPYHVV 319
>gi|345862361|ref|ZP_08814586.1| seryl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344324546|gb|EGW36099.1| seryl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 421
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 182/319 (57%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N E V + R+ + +L+ L E + +V+ L+ RN V+ ++ G+
Sbjct: 2 LDLKFVRNNPEVVKEALEKRHVSISLDNFLRQEEDRRKLLFDVETLKARRNTVSEEV-GR 60
Query: 135 LEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI 192
L+ + + + L+ E + + + + LE V + E+++ IPN+ H VP+G ++ S
Sbjct: 61 LKRTGEDAESLVLEMREVGQTIKDLELKSVDIVQEMERVLYEIPNIPHASVPIGPDENSN 120
Query: 193 IR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ ++ G P F F K H+++G+ LD+FDF AA+V+G++F + K LE LI++
Sbjct: 121 VQIRSWGTPRHFEFEPKAHYEIGEKLDVFDFVRAAKVTGARFTFYKGLGAKLERSLISFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L +G+T + P +V + + G P+ + + + G + LI TAE+PV ++
Sbjct: 181 LDRHTSKGYTEILPPYLVNRTSMIGTGQLPKFED-DAFKVAGTEYFLIPTAEVPVTNLYR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL S LP+ + A+S CFR+EAG+AG TRGL R HQF+K+E+ FC PE S E
Sbjct: 240 EEILDGSQLPIHHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFCLPENSYEELEL 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L R E + L L ++++
Sbjct: 300 LTRDAESILQELELPYRVM 318
>gi|301336273|ref|ZP_07224475.1| seryl-tRNA synthetase [Chlamydia muridarum MopnTet14]
Length = 428
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 176/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D + IR + A ++ ++ +LE +L+L +K+ ++ + D L R ++ ++ K
Sbjct: 2 LDIRLIRKEPKECEARLQKKDPLISLERLLDLDKKVRQLKSDSDALLARRKTLSGQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K+ + LI+E + + L+ LE L + LQ +PN DVPV + +
Sbjct: 62 KVAKEDATPLIQEVSAIADQLIALENILQEQEALLQDLMARLPNYPDEDVPVSPDKSGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+ G F FP K H QL +AL I DF A+ +GS + KN V+LE L+ + L
Sbjct: 122 VIKSHGKLPSFTFPPKHHMQLNEALRILDFKLPAKTTGSGWPAYKNTGVLLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G H
Sbjct: 182 NKQQSHGFQLWLPPLLVKRDILFGSGQIPK-FDGQYYRVEDGEQSLFLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+E LPL YAAF+ CFR EAGA G+ RGL RVHQF K+EMF F PE+ ++ ++
Sbjct: 241 SQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQFHKIEMFAFTTPEQEETAYQ 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
++I I E++ S L L ++L L
Sbjct: 301 KMIGIVEEILSELQLPYQLSLL 322
>gi|338811967|ref|ZP_08624167.1| seryl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337276053|gb|EGO64490.1| seryl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 429
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 170/327 (51%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R N E V NIR + + L LV +EL K + + D LR +RN+++ ++
Sbjct: 5 LDIKFLRTNPEMVKDNIRKKFQDHKLVLVDEVIELDRKARDAKSRCDVLRSQRNSISKEI 64
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTD-------ELQQEAQCIPNMTHPDVP 184
L S++ EE + K + T+ +L L + ++++ IPNM P VP
Sbjct: 65 GALLAKSQK----EEAEQTKTKVATIAAELTSLEELENQLAVQIRERMLAIPNMIDPSVP 120
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G+P V NF V H + + L D D+A + SG+ FYYL L
Sbjct: 121 IGRDDSENLELEQFGDPVVPNFTVPYHIDIMEKLQGIDLDSARKTSGNGFYYLSGNIARL 180
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
++++ +I RGFT P ++RS VV N +Y IEG D LIGT+E
Sbjct: 181 HSAILSYARDFMIDRGFTYYIPPFMIRSKVVTGVMSFAEMENM-MYKIEGEDLYLIGTSE 239
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 240 HSMIGKFIDTILDEEQLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPE 299
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + + L + D + SL + + L
Sbjct: 300 ESARWFKILYQNTVDFFRSLDIPVRTL 326
>gi|226499136|ref|NP_001140663.1| seryl-tRNA synthetase isoform 1 [Zea mays]
gi|194700466|gb|ACF84317.1| unknown [Zea mays]
gi|414591450|tpg|DAA42021.1| TPA: seryl-tRNA synthetase isoform 1 [Zea mays]
gi|414591451|tpg|DAA42022.1| TPA: seryl-tRNA synthetase isoform 2 [Zea mays]
gi|414591452|tpg|DAA42023.1| TPA: seryl-tRNA synthetase isoform 3 [Zea mays]
Length = 458
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 186/330 (56%), Gaps = 17/330 (5%)
Query: 75 IDFKWIRDNKEAVSANIR--NRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVAN 129
+D R +K IR R+ A++ELV E L + Q E+D++R+E NA +
Sbjct: 2 LDINLFRTDKGGNPELIRESQRSRFASVELVDEVIALDKAWRERQFELDKIRQELNATSK 61
Query: 130 KMKGKLEPS----ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
K+ GKL+ S E +KL+E +K+ L E ++ + L + I N+ H VPV
Sbjct: 62 KI-GKLKASKQEEEAKKLMESTDEIKKRLAAKEVEVQEAKSTLDAKLTTIGNIVHESVPV 120
Query: 186 GGEDCS-IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
++ + I +T G V +K+H L + LDI + A+V+G + +YLK+E V+L
Sbjct: 121 SEDEANNKIVRTFGEKRVEE-NLKNHVDLCRMLDIVALEKGADVAGGRGFYLKDEGVLLN 179
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTA 302
+ LIN+ L+ + KRGF P+ TP +R + KC Q + ++Y + +G D+ LI T+
Sbjct: 180 LALINFGLAFLRKRGFKPMQTPFFMRKETMAKCA-QLAQFDEELYKVTGDGEDKYLIATS 238
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E P+ H+ + + LP+KYA +S CFR EAG+ G T G++RVHQF K+E F P
Sbjct: 239 EQPLCAYHLGDRIYPAELPIKYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCITSP 298
Query: 363 EESDSY--HEELIRIEEDLYSSLGLHFKLL 390
++DS+ HEE+++ ED Y +GL ++++
Sbjct: 299 NDNDSWEMHEEMLKNSEDYYKEIGLPYQVV 328
>gi|429760339|ref|ZP_19292819.1| serine--tRNA ligase [Veillonella atypica KON]
gi|429177673|gb|EKY18981.1| serine--tRNA ligase [Veillonella atypica KON]
Length = 436
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 178/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D K++R+N E V N+ NR++ +L+ + Y++ + ++V+ L+ RN+V ++
Sbjct: 12 LDLKFVRENLELVKQNLDNRHTKGDLDTFVAAYDERKQLIQKVEELKALRNSVTEEISQL 71
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K I E K + + + L+ + ++ + L+ A +PNM VPVG ED ++
Sbjct: 72 KRNKENADDKIAEMKRVGDEISELDGRIREVEESLRNAALMLPNMCDASVPVGADEDENV 131
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F K H+ +G+ LDI DF+ A ++SG++F K LE LIN+ +
Sbjct: 132 EQRKWGEPRQFDFEPKAHWDIGEDLDILDFNRAVKMSGARFTVYKGLGARLERALINFMV 191
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K+G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 192 DLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEDTEYFLIPTAEVTLTNYHS 250
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S + E+
Sbjct: 251 GEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLSKPEDSWNELEK 310
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L F+++
Sbjct: 311 LTDNAEEVLRLLELPFRVI 329
>gi|308272097|emb|CBX28705.1| Seryl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 431
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 190/329 (57%), Gaps = 12/329 (3%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM- 131
+ ++ K++R N + V ++I R+ +A++E K+ ++ E++ LR RN ++K+
Sbjct: 7 SMLEIKFVRQNLDLVQSSILKRHKSADIEGFKNYDSKVRSILLEIEELRHRRNVFSDKIA 66
Query: 132 ---KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K ++P+ L+ E +N E + L +L++ ++L + IPNM + VP G+
Sbjct: 67 SMKKKGIDPN---TLVLEMRNESEKIKILNSELLENEEKLNKIIMEIPNMPNASVP-EGK 122
Query: 189 DCS--IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
DCS ++ +TVG F+F K+H++LG++L IFDF+ A++++G++F LE
Sbjct: 123 DCSDNLLIRTVGKIPDFDFEPKNHWELGESLKIFDFERASKITGARFPLYFGAGAKLERS 182
Query: 247 LINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+IN+ L + G+T + P IV S + G P+ + ++ +EG D ++ TAE+P
Sbjct: 183 IINFMLEIHTTEHGYTEVLPPFIVNSQSLTSTGQLPKFKD-DLFKLEGWDYYMVPTAEVP 241
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
V IH + IL ES LP+ Y A++ CFR+EAG+ G T+GL R HQF+K+E+ F +PE S
Sbjct: 242 VTNIHQNEILDESDLPILYTAYTPCFRSEAGSYGKDTKGLIRQHQFNKVELVKFVKPETS 301
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLLLFLA 394
E+L + E + L L ++++ A
Sbjct: 302 YDELEKLTQDAESILKRLNLPYRVVSLCA 330
>gi|340358863|ref|ZP_08681366.1| serine--tRNA ligase [Actinomyces sp. oral taxon 448 str. F0400]
gi|339885609|gb|EGQ75318.1| serine--tRNA ligase [Actinomyces sp. oral taxon 448 str. F0400]
Length = 423
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 174/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ L + ++E E ++ + LR E+ V+ + G
Sbjct: 2 IDLRALRENPEPYRASQRARGADVALVDRIIEADEARRTSLQDFESLRAEQKTVSRSV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER ++ + L + E L + A+ N+ P GGE+ ++
Sbjct: 61 KASPGERPAVLARARELAARVKEAESAADGAAAALDELARQFANLIE-GAPAGGEEDYVV 119
Query: 194 RKTVGNPSVFNFPVK-----DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ G PS +F + DH LG+ALDI D A+V G++FYYLK + LE+ L+
Sbjct: 120 LRHEG-PSPRDFAAEGLTPADHLALGEALDIIDTRRGAKVCGARFYYLKGWGMRLELALM 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
L + + GF P+TTP +V ++ GF A+ ++Y + D L GT+E+ + G
Sbjct: 179 TAALDKAVSHGFVPMTTPTLVTPQIMGGTGFLGAHAD-EIYYLPADDLYLTGTSEVALAG 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
D IL + P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF + PE++ +
Sbjct: 238 YRADEILDLTDGPERYMGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYVHPEDAVAE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
H+ L+ +EE++ + +GL ++++
Sbjct: 298 HQRLLALEEEMLALVGLPYRVI 319
>gi|415733876|ref|ZP_11474374.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419653980|ref|ZP_14184936.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419657826|ref|ZP_14188472.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419665390|ref|ZP_14195460.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419686336|ref|ZP_14214770.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1798]
gi|315926699|gb|EFV06078.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|380631961|gb|EIB50098.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380634191|gb|EIB52086.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380643720|gb|EIB60938.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380664621|gb|EIB80216.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1798]
Length = 411
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTTL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNVLENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ FDF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWFDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|340345509|ref|ZP_08668641.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520650|gb|EGP94373.1| Seryl-tRNA synthetase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 420
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 180/326 (55%), Gaps = 15/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K I++N + + ++ R NL+ ++E +K ++ + D++R+++N +A
Sbjct: 2 LDPKIIKENPQRIRDMLKARAVEFNLDELVEFDQKRRDLILKTDKMRKKKNQIA------ 55
Query: 135 LEPSERQK-------LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
LE S+++K ++ E KN+ L LE ++ + A IPN+ H VP+G
Sbjct: 56 LEISQKKKSGEDISPILSEMKNISGELTKLESLQEEVEKKYSNLALTIPNLIHESVPIGK 115
Query: 188 EDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
++ + I K G F+F + DH + LD+ D + AA+V+G++FYYLKN+ V L
Sbjct: 116 DETANIEIKKWGTIPKFDFKINDHIDISANLDLVDLERAAKVAGARFYYLKNDLVRLNQS 175
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
LI++ L ++++ ++ + P ++ +E +Y I+ D +IGT+E +
Sbjct: 176 LIHYGLDFLVEKNYSLVQPPYMINRQSMEGAIIADDFEEV-IYKIDNEDLYMIGTSEHAM 234
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
+ + I+ LPL++A S CFR EAGA G +G++RVHQF K+E FVF +PEES
Sbjct: 235 AAMRSNEIIEGKDLPLRFAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFARPEESW 294
Query: 367 SYHEELIRIEEDLYSSLGLHFKLLLF 392
HE ++ + E+ Y L + +K++L
Sbjct: 295 KEHERMLSVAEEFYQKLEIPYKVMLL 320
>gi|407465514|ref|YP_006776396.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
gi|407048702|gb|AFS83454.1| seryl-tRNA synthetase [Candidatus Nitrosopumilus sp. AR2]
Length = 421
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 178/321 (55%), Gaps = 5/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K I++ + + ++ R+ + NL+ ++E +K + D LR+++N VA ++ K
Sbjct: 2 LDPKLIKEKPQIIRDMLKARSVDFNLDGLIESDQKRREFIIKTDELRKKKNQVALEISQK 61
Query: 135 LEPSERQKLI-EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ E LI E KN+ L LE + + + + A IPN+ H VP+G ++ +
Sbjct: 62 KKAGEDASLILSEMKNVSAELAKLESEQENIENTYSRLALTIPNLVHDSVPIGTDESANQ 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+RK GN F+F + DH + + LD+ D + AA+V+G++FYYLKN+ V L LI++
Sbjct: 122 EVRKW-GNVPNFDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHYG 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L + K+ ++ + P ++ +E +Y +E D +IGT+E + +
Sbjct: 181 LDFLAKKEYSLVQPPYMINRESMEGAVIADDFEEV-IYKVEDEDLYMIGTSEHAMAAMRS 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL LPL+YA S CFR EAGA G +G++RVHQF K+E FVF +PE+S HE
Sbjct: 240 KEILEGKDLPLRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFSRPEDSWKEHER 299
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
++ + E+ Y +L + +++L
Sbjct: 300 MLSVAEEFYQNLEIPHRVMLL 320
>gi|379057767|ref|ZP_09848293.1| seryl-tRNA synthetase [Serinicoccus profundi MCCC 1A05965]
Length = 426
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R + + V + + R + ++ + VL E E + R E+ A K+
Sbjct: 2 IDLRELRADPDRVRTSQQARGEDPSVVDQVLSADETHRRSLAEFEAARAEQKAFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K+L + TLE + + + I N+ VPVGGED +
Sbjct: 61 QAQGEEKQALLAEVKDLSARVKTLEAQAAEAATTRDEAMRRIGNVIIEGVPVGGEDDFVT 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F F +DH LG+ L D A+VSG++FYYL + LE L+
Sbjct: 121 LEEVGTPRDFAAEGFEPQDHLALGEGLGAIDTARGAKVSGARFYYLLGDGARLEQALMGL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ GF P P +VR ++ G+ A+ +VY +E D LIGT+E+ + G+H
Sbjct: 181 AQQIAQEEGFVPAIVPNLVRPEIMGGAGYLDAHAD-EVYRLEADDLYLIGTSEVALAGLH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL + P +Y A S C+R EAG+ G T+G++RVHQF+K EMFV+C+ E++++ H+
Sbjct: 240 ADEILDLADGPRRYVATSTCYRREAGSYGKDTKGIFRVHQFTKTEMFVYCRVEDAEAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+RIE L +L L ++++
Sbjct: 300 NLLRIERRLLDALELPYRII 319
>gi|291541854|emb|CBL14964.1| seryl-tRNA synthetase [Ruminococcus bromii L2-63]
Length = 426
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N +AV NI+ + + L LV +EL E+ V+K+ D LR RN ++ ++
Sbjct: 2 IDIKFLRENPDAVKENIKKKFQDYKLPLVDQVIELDEQSRAVKKQADELRSNRNKISKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E E L EE E L LE+ L+ ++ + IPN+ P VP+G
Sbjct: 62 GSLMAQGKKE--EGMALKEEVTKQAEQLAELEKQESDLSAKVTEIMMQIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G+P V +F + H ++ + + D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSQNVEIEKFGDPFVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I + +I RGFT P ++RS+VV ++ +Y IEG D LIGT+E
Sbjct: 180 AVIAYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 239 MIGKFIDTINKEENLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDS 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ S+ + + L
Sbjct: 299 KMWFDKLWQNTVDLFRSMDIPVRTL 323
>gi|86153826|ref|ZP_01072029.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|419662911|ref|ZP_14193118.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419669580|ref|ZP_14199360.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-11]
gi|85842787|gb|EAQ59999.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380644006|gb|EIB61211.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380646891|gb|EIB63829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-11]
Length = 411
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNVLENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ FDF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWFDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|289765941|ref|ZP_06525319.1| seryl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717496|gb|EFD81508.1| seryl-tRNA synthetase [Fusobacterium sp. D11]
Length = 424
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 RIMLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+
Sbjct: 62 ANLKKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDEN 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN
Sbjct: 122 YNLEIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L ++ G+T TP +V++ V E G P+ + + D LI T+EI +
Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S
Sbjct: 240 IHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E++++ E + L L ++++
Sbjct: 300 LEKMVKNAETILQRLELPYRVI 321
>gi|295798138|emb|CAX68980.1| Seryl-tRNA synthetase [uncultured bacterium]
Length = 423
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---- 130
+D K +R E V ++NRN +L+ L++ + ++ ++++ LR E+N + +
Sbjct: 2 LDIKLVRQQPELVRQALKNRNYKFDLDDFLKIDVDLRSLIQQIESLRAEQNKINQEVPLL 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K K + S + IEE + +++ + L L +E + Q +PN+ H +PVG
Sbjct: 62 IKAKQDASAK---IEESRQIRKKVDELNVKLAANQEEWDKRYQRLPNIPHESLPVGAPSA 118
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ + K VGN F+F KDH +L +LDI DF+ A+++GS F K + +LE LIN+
Sbjct: 119 NRVVKEVGNKPQFSFKPKDHIELASSLDIIDFERGAKLAGSNFVLYKGQGALLERALINF 178
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + G+ + P +V + G P +Y ++ D LI TAE+P+ I
Sbjct: 179 MLQVHTTEHGYKEMWPPVLVNPDSMFGTGQLP-NLEEDMYKLKNDDLYLIPTAEVPLTNI 237
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ + IL E +LP K A+S CFR EAG+ G TRGL R+HQF K+E+ F +PE+S +
Sbjct: 238 YREEILDEEVLPHKITAYSSCFRREAGSYGKDTRGLVRLHQFDKVELVKFVKPEDSYNEL 297
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
E L+ D+ L L +++LL
Sbjct: 298 ELLLSDACDILDKLKLPYRILLL 320
>gi|312109164|ref|YP_003987480.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|336233559|ref|YP_004586175.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|423718285|ref|ZP_17692467.1| seryl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
gi|311214265|gb|ADP72869.1| seryl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|335360414|gb|AEH46094.1| seryl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|383365296|gb|EID42593.1| seryl-tRNA synthetase [Geobacillus thermoglucosidans TNO-09.020]
Length = 424
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 179/321 (55%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R++ + V I+ R + AN++ EL +K + + + L+ +RN V+ ++
Sbjct: 2 LDVKYLRNHFQEVKERIQKRGGDLANMDRFAELDKKRRELIAKAEELKNKRNEVSQQIAV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDC 190
K E + LI E + + + + +++++ ++ +EL IPN+ H VPVG ED
Sbjct: 62 LKREKKDANHLIAEMREVGDRIKAMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEEDN 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+RK G P F+F K H+ + L I DF+ AA+V+GS+F + K LE LIN+
Sbjct: 122 VEVRKW-GEPRSFSFEPKPHWDIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINF 180
Query: 251 TLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L I+ G+ + P +V + + G P+ + IE D LI TAE+PV +
Sbjct: 181 MLDVHIEEFGYQEILPPYLVNRASMTGTGQLPK-FEEDAFRIETEDYFLIPTAEVPVTNL 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D ILS LP+ YAA+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S
Sbjct: 240 HRDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDEL 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L E + LGL ++++
Sbjct: 300 EKLTNQAERILQLLGLPYRVV 320
>gi|335045092|ref|ZP_08538115.1| serine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
gi|333758878|gb|EGL36435.1| serine--tRNA ligase [Oribacterium sp. oral taxon 108 str. F0425]
Length = 473
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 177/325 (54%), Gaps = 8/325 (2%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVAN 129
+ +D K+IR+N + V NI+ + + L LV E+ + VQ E D LR ++N V+
Sbjct: 35 SMLDIKFIRENPDLVKENIKKKFQDEKLNLVDEVINLDVEARKVQMEADELRSKKNQVSK 94
Query: 130 KMKGKLEPSERQKLIEEGKN---LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
++ + E+++ + + + L LEE L +E+ + IPNM P VP+G
Sbjct: 95 QIGALMAKGEKEEAEKVKEEVAAFSKRLSELEEKEPMLQEEILKRMMVIPNMIDPSVPIG 154
Query: 187 GED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D C++ + G P V +FP+ H + ++ D DAA V+G+ FYYL + L
Sbjct: 155 KDDSCNVENERFGEPLVPDFPIPYHADIMESFGGLDMDAAGRVAGNGFYYLVGDMARLHS 214
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
++++ +I RGFT + P ++RS VV+ + +Y IEG D LIGT+E
Sbjct: 215 AVLSYARDFMIDRGFTYVIPPYMIRSKVVDGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 273
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D IL + LPL ++S CFR E G+ G RG+YR+HQF K EM V C+PE++
Sbjct: 274 MIGRFIDQILPAASLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPEDA 333
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+++++L + D + SL + + L
Sbjct: 334 MNWYQKLWQNTVDFFRSLDIPVRTL 358
>gi|374289118|ref|YP_005036203.1| seryl-tRNA synthetase [Bacteriovorax marinus SJ]
gi|301167659|emb|CBW27242.1| seryl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 422
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 181/319 (56%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N + V + +N + N +L+L+L + ++ +V L+E+RN+ + K+ K
Sbjct: 2 LDIKFIRENLDTVKNAAKVKNIDFNFDLLLDLDRDITELKGKVQELQEKRNSHSKKIP-K 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSII 193
ER LIEEG+ + L ++ L + EL+ P + PD P+G E+ ++
Sbjct: 61 ASAEERPALIEEGRAIGTELDAIKPSLTEKELELRNLLLQAPMIPSPDAPIGNDENDNVE 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
K G FNF DH ++ + + +F+ A VSGS+ Y L+N+ V+LEM + + L
Sbjct: 121 VKKHGELPQFNFKPLDHVEILEKQNWAEFEKIAAVSGSRSYSLRNDMVLLEMAMHRYALE 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ +GFT ++TP + R + G P G + QVY + D L GTAE+ + +H
Sbjct: 181 KLQSKGFTLVSTPSLAREEALVGTGHFPTGRD-QVYYLPEDDLYLSGTAEVQLNSLHSKD 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ--PEESDSYHEE 371
ILSE LP+ YA +S CFR EAG+ G RGL RVHQF K+E +V C+ PEES+ +H+
Sbjct: 240 ILSEDKLPILYAGYSPCFRREAGSYGRDVRGLIRVHQFMKVEQYVICKNSPEESNKWHKI 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E++ L ++++
Sbjct: 300 LLETSEEIVQDFELPYRIV 318
>gi|336399924|ref|ZP_08580721.1| seryl-tRNA synthetase [Fusobacterium sp. 21_1A]
gi|336161127|gb|EGN64137.1| seryl-tRNA synthetase [Fusobacterium sp. 21_1A]
Length = 421
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 178/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+ ++
Sbjct: 62 KKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN+ L
Sbjct: 122 EIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+++ E + L L ++++
Sbjct: 300 MVKNAETILQRLELPYRVI 318
>gi|346309535|ref|ZP_08851620.1| seryl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
gi|345898740|gb|EGX68602.1| seryl-tRNA synthetase [Dorea formicigenerans 4_6_53AFAA]
Length = 428
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 185/327 (56%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ + L LV +EL ++ +++EV+ LR ++N ++ ++
Sbjct: 2 LDIKFVRNNPEVVKQNIKNKFQDDKLPLVDEVIELDQRNREIKQEVEALRADKNQISKQI 61
Query: 132 -----KGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
+GK E +E +K ++E E L E+++ +++Q IPN+ P VP+
Sbjct: 62 GACMAQGKKEGAEELKKKVQENAERVEALSKEEKEV---EAKIKQNMMIIPNIIDPSVPI 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G P V ++ + H + ++ + D ++A +V+G+ FYYL + L
Sbjct: 119 GKDDSENVEIEKFGEPVVPDYEIPYHTDIMESFNGIDLESAGKVAGNGFYYLMGDIARLH 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 179 SAVISYARDFMIDRGFTYCIPPFMIRSNVVTGVMSFAEMDA--MMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D++L+E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTMLTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES ++++L + DL+ S+ + + L
Sbjct: 297 ESKMWYDKLWQNTVDLFRSMDIPVRTL 323
>gi|302390825|ref|YP_003826645.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302202902|gb|ADL11580.1| seryl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 426
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 181/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D +++R+N + + R ++AN++ E EK +V EV++L+ RN + K+ +
Sbjct: 2 LDLRFVRENTGLIKKVLEQRGTDANIDEFKEYDEKRRDVLYEVEQLKHRRNEASEKIGEL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K + + +LIEE + + + + L+E + + +++ + IPN+ H DVPVG E+ +I
Sbjct: 62 KRKGEDASELIEEMREVSDKISELDEIVAECEEKINEILLTIPNIPHEDVPVGDDEEDNI 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ P+ F+F + H+ +G+ LDI DF+ A+VSGS+F +LKN LE LI + +
Sbjct: 122 VAWKWEEPTEFDFEPQPHWDIGEELDILDFERGAKVSGSRFTFLKNLGARLERALIAFMI 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ G+ + P IVR + G P+ + IEG + LI TAE+PV ++
Sbjct: 182 DIHTEEHGYNEVFPPFIVRGESMVGTGQLPK-FEEDAFKIEGTNHYLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D I+ + LP+ + A+S CFR EAGA G TRG+ R HQF+K+E+ F +P S E+
Sbjct: 241 DEIMDKDELPIYHVAYSGCFRAEAGAHGRDTRGIIRQHQFNKVELVKFVEPGTSYDELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L++ E + L L ++++
Sbjct: 301 LVKNAEKVLQRLELPYRVM 319
>gi|227872156|ref|ZP_03990526.1| serine--tRNA ligase [Oribacterium sinus F0268]
gi|227842014|gb|EEJ52274.1| serine--tRNA ligase [Oribacterium sinus F0268]
Length = 440
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 171/323 (52%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + L LV E+ + VQ E D LR ++N V+ ++
Sbjct: 2 LDIKFVRENPEIVKENIRKKFQDEKLNLVDEVISLDVEARKVQMEADELRSKKNQVSKQI 61
Query: 132 KGKLEPSERQKLIEEGK---NLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ E++ + + + L LEE L +E+ + IPN+ P VP+G +
Sbjct: 62 GALMAKGEKEAAEKAKEEVATFSQRLAELEEKEPALQEEILKRMMVIPNIIDPSVPIGKD 121
Query: 189 D-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D C++ + G P V ++P+ H + + D DAA V+G+ FYYL + L +
Sbjct: 122 DSCNVENERFGEPVVPSYPIPYHADIMDSFSGLDLDAAGRVAGNGFYYLVGDVARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT + P ++RS VV+ + +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYVIPPYMIRSKVVDGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D IL LPL ++S CFR E G+ G RG+YR+HQF K EM V C+PEE+
Sbjct: 241 GRFIDQILPVESLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPEEAMD 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++ +L + D + SL + + L
Sbjct: 301 WYNKLWQNTVDFFRSLDIPVRTL 323
>gi|336420332|ref|ZP_08600566.1| serine--tRNA ligase [Fusobacterium sp. 11_3_2]
gi|336161099|gb|EGN64110.1| serine--tRNA ligase [Fusobacterium sp. 11_3_2]
Length = 421
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 178/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+ ++
Sbjct: 62 KKEKKDASHLIEKMGGVSTKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN+ L
Sbjct: 122 EIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+++ E + L L ++++
Sbjct: 300 MVKNAETILQRLELPYRVI 318
>gi|423137693|ref|ZP_17125336.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
gi|371959382|gb|EHO77071.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 421
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 178/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+ ++
Sbjct: 62 KKEKKDATHLIEKMGGVSTKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDENYNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN+ L
Sbjct: 122 EIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+++ E + L L ++++
Sbjct: 300 MVKNAETILQRLELPYRVI 318
>gi|121613220|ref|YP_001000100.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167005058|ref|ZP_02270816.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
gi|166228636|sp|A1VYA9.1|SYS_CAMJJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|87250089|gb|EAQ73047.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 411
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NPS F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|237743593|ref|ZP_04574074.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|229432624|gb|EEO42836.1| seryl-tRNA synthetase [Fusobacterium sp. 7_1]
Length = 424
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 179/322 (55%), Gaps = 5/322 (1%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 RIMLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNVSVEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G E+
Sbjct: 62 ANLKKEKKDASHLIEKMGGVSAKIKELDNELVEIDEKIKDIQLNIPNVYHPSTPIGPDEN 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN
Sbjct: 122 YNLEIRKWGEPKKFSFEPKPHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L ++ G+T TP +V++ V E G P+ + + D LI T+EI +
Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH IL +S LP Y A+S CFR EAG+ G +GL RVHQF+K+EM E S
Sbjct: 240 IHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDAESSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E++++ E + L L ++++
Sbjct: 300 LEKMVKNAETILQRLELPYRVI 321
>gi|15610970|ref|NP_218351.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|15843458|ref|NP_338495.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31795008|ref|NP_857501.1| seryl-tRNA synthetase [Mycobacterium bovis AF2122/97]
gi|121639752|ref|YP_979976.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148663702|ref|YP_001285225.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148825041|ref|YP_001289795.1| seryl-tRNA synthetase [Mycobacterium tuberculosis F11]
gi|167969949|ref|ZP_02552226.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|224992247|ref|YP_002646937.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800882|ref|YP_003033884.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 1435]
gi|254552950|ref|ZP_05143397.1| seryl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289441272|ref|ZP_06431016.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289445435|ref|ZP_06435179.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289572087|ref|ZP_06452314.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289747675|ref|ZP_06507053.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289748365|ref|ZP_06507743.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289755967|ref|ZP_06515345.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289764020|ref|ZP_06523398.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|294993037|ref|ZP_06798728.1| seryl-tRNA synthetase [Mycobacterium tuberculosis 210]
gi|297636517|ref|ZP_06954297.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
gi|297733512|ref|ZP_06962630.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
gi|298527309|ref|ZP_07014718.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|306778197|ref|ZP_07416534.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|306778727|ref|ZP_07417064.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|306786754|ref|ZP_07425076.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|306786884|ref|ZP_07425206.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|306791439|ref|ZP_07429741.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|306795504|ref|ZP_07433806.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|306801479|ref|ZP_07438147.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|306805686|ref|ZP_07442354.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|306970081|ref|ZP_07482742.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|307082021|ref|ZP_07491191.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|307086634|ref|ZP_07495747.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|313660843|ref|ZP_07817723.1| seryl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
gi|339633829|ref|YP_004725471.1| seryl-tRNA synthetase [Mycobacterium africanum GM041182]
gi|340628803|ref|YP_004747255.1| seryl-tRNA synthetase SERS [Mycobacterium canettii CIPT 140010059]
gi|375298104|ref|YP_005102372.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|378773614|ref|YP_005173347.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|383309548|ref|YP_005362359.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|385993045|ref|YP_005911344.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|385996687|ref|YP_005914986.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|386000626|ref|YP_005918926.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|386006629|ref|YP_005924908.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392388428|ref|YP_005310057.1| serS [Mycobacterium tuberculosis UT205]
gi|392434318|ref|YP_006475363.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|397675795|ref|YP_006517331.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|422815089|ref|ZP_16863307.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|424806395|ref|ZP_18231826.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|424945709|ref|ZP_18361405.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433628977|ref|YP_007262606.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|449065953|ref|YP_007433036.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54039689|sp|P67562.1|SYS_MYCBO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|54042040|sp|P67561.1|SYS_MYCTU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222746|sp|A1KQG9.1|SYS_MYCBP RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166222750|sp|A5U9G3.1|SYS_MYCTA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|254783038|sp|C1AIU0.1|SYS_MYCBT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|13883829|gb|AAK48309.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|31620606|emb|CAD96050.1| SERYL-TRNA SYNTHETASE SERS (SERINE--TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium bovis AF2122/97]
gi|121495400|emb|CAL73887.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148507854|gb|ABQ75663.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148723568|gb|ABR08193.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis F11]
gi|224775363|dbj|BAH28169.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322386|gb|ACT26989.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 1435]
gi|289414191|gb|EFD11431.1| seryl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289418393|gb|EFD15594.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CPHL_A]
gi|289545841|gb|EFD49489.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T17]
gi|289688203|gb|EFD55691.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 02_1987]
gi|289688952|gb|EFD56381.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis T92]
gi|289696554|gb|EFD63983.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis EAS054]
gi|289711526|gb|EFD75542.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis GM 1503]
gi|298497103|gb|EFI32397.1| seryl-tRNA synthetase sers [Mycobacterium tuberculosis 94_M4241A]
gi|308213530|gb|EFO72929.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu001]
gi|308328286|gb|EFP17137.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu002]
gi|308328688|gb|EFP17539.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu003]
gi|308336434|gb|EFP25285.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu004]
gi|308340028|gb|EFP28879.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu005]
gi|308344026|gb|EFP32877.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu006]
gi|308347812|gb|EFP36663.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu007]
gi|308351748|gb|EFP40599.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu008]
gi|308352437|gb|EFP41288.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu009]
gi|308360344|gb|EFP49195.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu011]
gi|308363977|gb|EFP52828.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis SUMu012]
gi|323717501|gb|EGB26704.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis CDC1551A]
gi|326905671|gb|EGE52604.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis W-148]
gi|328460610|gb|AEB06033.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 4207]
gi|339296642|gb|AEJ48753.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079]
gi|339300239|gb|AEJ52349.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180]
gi|339333185|emb|CCC28918.1| SERYL-tRNA synthetase SERS (serine--tRNA ligase) [Mycobacterium
africanum GM041182]
gi|340006993|emb|CCC46184.1| seryl-tRNA synthetase SERS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium canettii CIPT 140010059]
gi|341603773|emb|CCC66454.1| seryl-tRNA synthetase serS [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344221674|gb|AEN02305.1| seryl-tRNA synthetase [Mycobacterium tuberculosis CTRI-2]
gi|356595935|gb|AET21164.1| Seryl-tRNA synthetase [Mycobacterium bovis BCG str. Mexico]
gi|358230224|dbj|GAA43716.1| seryl-tRNA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378546979|emb|CCE39258.1| serS [Mycobacterium tuberculosis UT205]
gi|379030232|dbj|BAL67965.1| seryl-tRNA synthetase [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380723501|gb|AFE18610.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB327]
gi|380727117|gb|AFE14912.1| seryl-tRNA synthetase [Mycobacterium tuberculosis RGTB423]
gi|392055728|gb|AFM51286.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis KZN 605]
gi|395140701|gb|AFN51860.1| seryl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|432156583|emb|CCK53845.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140060008]
gi|440583348|emb|CCG13751.1| SERYL-TRNA SYNTHETASE SERS (SERINE-TRNA LIGASE) (SERRS) (SERINE
TRANSLASE) [Mycobacterium tuberculosis 7199-99]
gi|444897397|emb|CCP46663.1| SERYL-tRNA synthetase SerS (serine--tRNA ligase) (SERRS) (serine
translase) [Mycobacterium tuberculosis H37Rv]
gi|449034461|gb|AGE69888.1| seryl-tRNA synthetase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 419
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 170/318 (53%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV + +R + L + +L V D LR E+ A A+K G
Sbjct: 2 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|282882666|ref|ZP_06291276.1| serine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297479|gb|EFA89965.1| serine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 429
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 173/324 (53%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR N E V NI+ + + L+LV +EL +K + D LR +RN+++ ++
Sbjct: 2 LDIKLIRTNPELVKENIKKKFQDEKLKLVDEVIELDKKNREAKNHGDELRAKRNSISKEI 61
Query: 132 KGKLEPSERQKL----IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
G ++ ++ K +E K KE L TLEE+ KL +E++Q IP + VP+G
Sbjct: 62 GGFMKNGQKDKAESAKLEVAKINKE-LETLEEEQKKLDEEVRQRMLVIPQIIDETVPIGK 120
Query: 188 EDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+D + + G P + ++ + H + + D D D++ SG+ FYYLK + L
Sbjct: 121 DDSENVEIEKFGEPMIPSYEIPYHVDIIETFDGIDLDSSRNTSGAGFYYLKGDIARLHSA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
++++ +I RGFT P ++RS VV N +Y IEG D LIGT+E +
Sbjct: 181 ILSYARDFMIDRGFTYYIPPFMIRSDVVTGVMSFAEMENM-MYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +++I E +PL ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 240 IGKFINTITDEDKMPLTMTSYSPCFRKEVGAHGIEERGIYRIHQFEKQEMVVICKPEDSK 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ E L R D + SL + + L
Sbjct: 300 KWFENLWRNTVDFFRSLEIPVRTL 323
>gi|320094982|ref|ZP_08026702.1| serine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978094|gb|EFW09717.1| serine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 424
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 169/321 (52%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E + R R ++ L + ++E +E + LR + V +K G
Sbjct: 2 IDVRALRENPEPAKDSQRARGADPGLVDEIIEADAARRGALQEFESLRATQKEV-SKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED-CSI 192
+ ER ++ + K L E + E E + A+ +PN+ VP GGED ++
Sbjct: 61 RASKEERPAILAKAKELAEQVKAAEAAANAADAEADRLARLLPNLVLDGVPRGGEDDYTV 120
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+R P F F KDH LG+ LD D A+VSG++FYYLK LE+ L++
Sbjct: 121 LRHEGPAPRDFAAEGFEPKDHLALGEGLDAIDTKRGAKVSGARFYYLKGVGARLELALMS 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + + GF P+ TP +V ++ GF ++ ++Y + D L GT+E+ + G
Sbjct: 181 MALDQAHRAGFVPMMTPTLVSPQIMGGTGFLGEHSD-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S P +Y +S C+R EAGAAG TRG+ RVHQF+K EMF +C+PE++ H
Sbjct: 240 HADEILDLSDGPKRYLGWSTCYRREAGAAGKDTRGIIRVHQFNKAEMFSYCRPEDAAEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ EE++ + L ++++
Sbjct: 300 ARFLAWEEEMLAKAELPYRVI 320
>gi|363897062|ref|ZP_09323605.1| seryl-tRNA synthetase [Oribacterium sp. ACB7]
gi|361959689|gb|EHL12965.1| seryl-tRNA synthetase [Oribacterium sp. ACB7]
Length = 438
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANKM 131
+D K+IR+N + V NI+ + + L LV E+ + VQ E D LR ++N V+ ++
Sbjct: 2 LDIKFIRENPDLVKENIKKKFQDEKLNLVDEVINLDVEARKVQMEADELRSKKNQVSKQI 61
Query: 132 KGKLEPSERQKLIEEGKN---LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ E+++ + + + L LEE L +E+ + IPNM P VP+G +
Sbjct: 62 GALMAKGEKEEAEKVKEEVAAFSKRLSELEEKEPMLQEEILKRMMVIPNMIDPSVPIGKD 121
Query: 189 D-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D C++ + G P V +FP+ H + ++ D DAA V+G+ FYYL + L +
Sbjct: 122 DSCNVENERFGEPLVPDFPIPYHADIMESFGGLDMDAAGRVAGNGFYYLVGDMARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT + P ++RS VV+ + +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYVIPPYMIRSKVVDGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D IL + LPL ++S CFR E G+ G RG+YR+HQF K EM V C+PE++ +
Sbjct: 241 GRFIDQILPAASLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPEDAMN 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYQKLWQNTVDFFRSLDIPVRTL 323
>gi|397690548|ref|YP_006527802.1| seryl-tRNA synthetase [Melioribacter roseus P3M]
gi|395812040|gb|AFN74789.1| seryl-tRNA synthetase [Melioribacter roseus P3M]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 180/326 (55%), Gaps = 11/326 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
+D K+IR+N + V +R++ + N++ +LEL EK + D L+ RN V+++ +
Sbjct: 2 LDIKFIRENPDLVRKGLRDKGAADNVDEILELDEKRRKIIARNDELKALRNKVSSQIPIL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--ED 189
K K E + + EE K + + + L+ +L K +EL + + PN+ H VPVGG ED
Sbjct: 62 KKKGEDT--AAVFEEMKKVGDEIAELDNELRKTDEELDEILRWTPNLAHESVPVGGSAED 119
Query: 190 CSIIRKTVGNPSVFN--FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+RK + F+ F + DH +LGK LDI DF+ ++SGS F K LE L
Sbjct: 120 NVEVRKWLPEGFSFDNDFEMLDHIELGKKLDILDFERGTKISGSGFPLYKGAGATLERAL 179
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
IN+ L + G+ + P +V ++ G P+ +Y IE I TAE+P+
Sbjct: 180 INFMLDFHLQNHGYKEILPPILVNRDSMKGTGQIPK-LEEDMYFIEKDGLYPIPTAEVPI 238
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
IH + +L+E L +KY ++ CFR EAG+ G ++G RVHQF+K+EM F +PE+S
Sbjct: 239 TNIHRNEVLNEKELTIKYVGYTPCFRREAGSYGKESKGFLRVHQFNKVEMVKFSKPEDSY 298
Query: 367 SYHEELIRIEEDLYSSLGLHFKLLLF 392
E+L++ ED+ +L + ++++L
Sbjct: 299 DELEKLVKDAEDILQALNIPYRIILL 324
>gi|294790574|ref|ZP_06755732.1| serine--tRNA ligase [Scardovia inopinata F0304]
gi|294458471|gb|EFG26824.1| serine--tRNA ligase [Scardovia inopinata F0304]
Length = 428
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR+N + V + R R + L + VL+ ++ + + + R E+ + K
Sbjct: 2 LDIQFIRENSDIVKESQRKRGESVELVDEVLQADKQRRDSLSQYETTRAEQKRIG-KTVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
ER +I K L + ++ K T+E + N+ P+ P GGED ++
Sbjct: 61 AASAEERPAIIARTKELSARVSAFKDAADKATEEYTAAMWKLSNIVEPEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG F F K+H +LG+ + D +VSGS+FY+L+ LE+ ++
Sbjct: 121 VKKVGQLRDFAAEGFDPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGAVARLELAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + GF TTP +VR ++ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 GVDQAEAHGFIMTTTPTLVRPEIMAGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S PL+YA +S C+R EAG+AG T G+ RVHQF+K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSKGPLRYAGWSSCYRREAGSAGKDTMGIIRVHQFNKVEMFVYCRQEDSYAQH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ L+ +E+++ + + ++++
Sbjct: 300 QNLLAMEQEMLGKVEVPYRII 320
>gi|315305180|ref|ZP_07875168.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596]
gi|313626448|gb|EFR95593.1| seryl-tRNA synthetase [Listeria ivanovii FSL F6-596]
Length = 437
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 183/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N + V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + + IEE + + + + TL+ +L ++ D+L IPN+
Sbjct: 57 LKNQRNEVSQEIAKLKREKQDAEAKIEEMRVVGDRIKTLDIELKEIDDKLDTILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H P+G ED +I + G F+F K H+ +G LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPIGESEDDNIEIRKWGEVREFDFEPKAHWDIGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S + E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYAALEKLTENAEEVLRRLELPYRVL 329
>gi|410666400|ref|YP_006918771.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
gi|409104147|gb|AFV10272.1| seryl-tRNA synthetase SerS [Thermacetogenium phaeum DSM 12270]
Length = 425
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR + E V + +RN +L+ VL E+ + E +RL+ RN ++ ++ G+
Sbjct: 2 LDLKFIRSHPEVVKKALSDRNVEFDLDQVLAWDEERRSKIAESERLKNRRNTLSQEV-GR 60
Query: 135 LEPSERQ--KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
L+ ++ LIEE + + ++ +L ++ +LQQ IPN+ H VPVG E +
Sbjct: 61 LKAAKEDAAHLIEEVREISRRSKEIDRELNEIEQKLQQALLLIPNIPHESVPVGPDEGAN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I+ + G P F F + H+++G+ LDI DF+ +V+G++F LK LE L+N+
Sbjct: 121 IVLRVEGEPPSFGFEPRPHWEIGENLDILDFERGVKVAGARFTVLKGWGARLERALVNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + G+T + P +V + + G P+ Y D LI TAE+PV ++
Sbjct: 181 LDLHTEEHGYTEIFPPFLVNRATMTGTGQLPKFEEDLFYC-NREDLFLIPTAEVPVTNLY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL +LP+ + A++ CFR EAGAAG TRGL R HQF+K+E+ F PE+S E
Sbjct: 240 SDEILPGEVLPIYHTAYTACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPEDSYLELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L ED+ LGL ++++
Sbjct: 300 KLTADAEDVLRRLGLAYRVV 319
>gi|358063787|ref|ZP_09150388.1| seryl-tRNA synthetase [Clostridium hathewayi WAL-18680]
gi|356697986|gb|EHI59545.1| seryl-tRNA synthetase [Clostridium hathewayi WAL-18680]
Length = 427
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 178/326 (54%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ ++ L LV +EL K + E D +R ERN ++ ++
Sbjct: 2 LDLKFVRENPEIVKQNIKNKFQDSKLGLVDEVIELDAKNRAAKAEADNIRAERNKLSKQI 61
Query: 132 KGKLEPSERQK------LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
+ ++++ L+ G E L LE +L +++++ IPN+ P VP+
Sbjct: 62 GALMAQGKKEEAEEVKKLVTAGA---ERLAALEAQEKELEEKVRKIMMTIPNIIDPSVPI 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G P V +F + H ++ ++ D D D+A +V+G+ FYYL + L
Sbjct: 119 GKDDSENVEVERYGEPVVPDFEIPYHTEIMESFDGIDLDSARKVAGNGFYYLMGDIARLH 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 179 SAVISYARDFMIDRGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTILPEESLPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S ++++L + DL+ SL + + L
Sbjct: 298 SPMWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|325000779|ref|ZP_08121891.1| seryl-tRNA synthetase [Pseudonocardia sp. P1]
Length = 416
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 9/316 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K R + + + R ++A+ + +L + + + V LR A K + K
Sbjct: 2 IDLKAARQDPDTFRTALSRRGASADFDALLAVDVRWRELTDRVGGLR-----AAQKQRPK 56
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+P+ Q +E+ K KE L E++L E + IPN+ P G E+ ++
Sbjct: 57 GKPTPEQ--VEQFKKEKEELREAEDELATADAERAELLARIPNLPDPTAADGMAEEDAVT 114
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T G F+F +DH L + D A +SGS+F Y + +LEM L + +
Sbjct: 115 VRTWGERPSFDFEPRDHLDLASSTGRVDMVRGARLSGSRFAYRFGDVALLEMALFRYVID 174
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ GF P+ P + + GF P + +Y +E L GT+E+ + GIHMD
Sbjct: 175 KLSGEGFVPVLGPVLANEKAMYGTGFLPT-EESNLYQLEKDGLYLTGTSEVALAGIHMDE 233
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
I+ LP +Y AFS FR EAGAAG T+G++RVHQF K+EM+V+C+PE+S +HE+L+
Sbjct: 234 IVELDDLPARYVAFSTNFRREAGAAGKDTKGMFRVHQFDKVEMYVYCRPEQSQEFHEQLL 293
Query: 374 RIEEDLYSSLGLHFKL 389
EE + LGL +++
Sbjct: 294 AHEESIVQELGLPYRV 309
>gi|29840653|ref|NP_829759.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC]
gi|33301682|sp|Q821P2.1|SYS_CHLCV RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|29835003|gb|AAP05637.1| seryl-tRNA synthetase [Chlamydophila caviae GPIC]
Length = 426
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ N +L +L+L +++ ++ + + L+ +R ++ ++ K
Sbjct: 2 LDIKLIRKAPEECEIRLRKKDPNISLLPILDLDKEVRRLKTDSESLQSQRKLLSTQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + +I E + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDASNMISEVERISQDLEKLEASLEEKNATLQDLLVRLPNYPEEDVPVCPDKSGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+VG F+F K H +L + L I DF A+ SGS + KN+ VMLE L+ + L
Sbjct: 122 VIKSVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVMLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKREILFGSGQIPK-FDGQYYCVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I +E LP+ YAA + CFR EAGAAG RGL RVHQF+K+EMF F PE++D +E
Sbjct: 241 SQEIFNEKDLPIYYAACTPCFRREAGAAGANERGLVRVHQFNKVEMFAFTTPEQADQAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLAVVEDILTELKLPYRLSLL 322
>gi|182417617|ref|ZP_02948938.1| seryl-tRNA synthetase [Clostridium butyricum 5521]
gi|237669568|ref|ZP_04529548.1| serine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378536|gb|EDT76066.1| seryl-tRNA synthetase [Clostridium butyricum 5521]
gi|237655012|gb|EEP52572.1| serine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 426
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 179/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+ + + L+LV +EL ++ Q + D LR R V+ ++
Sbjct: 2 LDLKFVRENPDIVKENIKKKFQDHKLQLVDEVIELDKEARKAQTDADALRANRKTVSKQI 61
Query: 132 KGKLEPSERQKLIE---EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ ++++ + + N E L LE + +L DE+++ IPN+ P VP+G +
Sbjct: 62 GALMAQGKKEEAEKLKEQVNNDAEKLANLEAEESRLQDEVKERMMKIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H + + + D D+A +V+GS FYYL + L +
Sbjct: 122 DNENVEVEKFGEPVVPDFEIPYHTDIMEKFNGIDLDSARKVAGSGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I++GFT + P ++RSSVV F+ G +Y I+G D LIGT+E +
Sbjct: 182 ISYARDFMIEKGFTYVIPPFMIRSSVVTGVMSFEEMGE--MMYKIDGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E LP ++S CFR E G+ G RG+YR+HQF K EM V C+PEES
Sbjct: 240 IGKFIDTIVDEKTLPQTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCKPEESK 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 300 EWFDKLWKNTVDLFRSLDIPVRTL 323
>gi|317123363|ref|YP_004097475.1| seryl-tRNA synthetase [Intrasporangium calvum DSM 43043]
gi|315587451|gb|ADU46748.1| seryl-tRNA synthetase [Intrasporangium calvum DSM 43043]
Length = 441
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 176/336 (52%), Gaps = 21/336 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD + V A+ R + + + +L E+ + E + LR E+ AV+ +
Sbjct: 2 IDIKLLRDEPDRVRASQLARGEDPGIVDAILAADERRRSSLGEFETLRAEQKAVSKDVGA 61
Query: 134 KLEPSERQK----------------LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+ +R K + +L + + LE + + EL++ + + N
Sbjct: 62 AMGAFQRAKKAGAPDAAHLESVAHAARAKAAHLSDQVKALESNADEAGAELERLLRKVGN 121
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
+ VP GGED ++ +T+G P F F DH LG+ L D + A+V G++FY
Sbjct: 122 VIIDGVPTGGEDDYVVVETIGTPRDFASEGFEPLDHLALGERLGAIDMERGAKVGGARFY 181
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA 294
YL +LE+ L+N +++ GFT + TP + R ++ GF A+ +VY +E
Sbjct: 182 YLTGVGALLELALLNMAMAQATAAGFTAMITPTMARPEIMLGAGFIDAHAD-EVYRLEAD 240
Query: 295 DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKL 354
D L GT+E+ + G H D I+ S P +YA +S C+R EAG+ G TRG+ RVHQF K+
Sbjct: 241 DLYLTGTSEVALAGFHADEIIDLSAGPKRYAGWSACYRREAGSHGKDTRGIIRVHQFHKV 300
Query: 355 EMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EMF +C+PE++++ H L+ E ++ + + + ++++
Sbjct: 301 EMFSYCRPEDAEAEHGRLLDWEREMLAKIEVPYRII 336
>gi|170754762|ref|YP_001780158.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|429244488|ref|ZP_19207933.1| seryl-tRNA synthetase [Clostridium botulinum CFSAN001628]
gi|169119974|gb|ACA43810.1| seryl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|428758479|gb|EKX80906.1| seryl-tRNA synthetase [Clostridium botulinum CFSAN001628]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ N++ E D LR RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAMRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L ++ + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKGEAEELKKQVTVASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFQVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEDSVM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|433444405|ref|ZP_20409319.1| seryl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001602|gb|ELK22476.1| seryl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 424
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 178/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D +++R N E V +++R + + E +L + + + + L+ +RN V+ ++
Sbjct: 2 LDLRFLRANFEEVKQKLQHRGEDLTDFERFEQLDRRRRELIAQAEELKNKRNDVSQQIAL 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + LI E + + + + L+++L ++ +L+ IPN+ H VP+G ED +
Sbjct: 62 LKREKKDADHLIAEMRQVGDRIKVLDDELREVEQQLETLLLSIPNIPHESVPIGESEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G P F+F K H+++ L I DF+ AA+V+GS+F + K LE LIN+
Sbjct: 122 VEIRKWGEPRSFSFEPKPHWEIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L V + G+ + P IV + + G P+ + IE D LI TAE+PV +H
Sbjct: 182 LDLHVEQHGYEEVLPPYIVNRTSMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNLH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP+KY A+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILSADDLPIKYVAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + LGL ++++
Sbjct: 301 KLTNDAERVLQLLGLPYRVM 320
>gi|386874608|ref|ZP_10116843.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
gi|386807581|gb|EIJ66965.1| serine--tRNA ligase [Candidatus Nitrosopumilus salaria BD31]
Length = 421
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 183/327 (55%), Gaps = 17/327 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + + ++ RN + +L+ ++E +K + + D LR+++N +A
Sbjct: 2 LDPKILKENPQIIRDMLKARNVDFDLDRLIESDQKRRELIIKTDELRKKKNQLA------ 55
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQ-------QEAQCIPNMTHPDVPVGG 187
++ S+++K E+ ++ + + DL KL E Q + A IPN+ VP+G
Sbjct: 56 IDISQKKKAGEDASSILSDMKNISGDLTKLESEQQIIENTYSRLALTIPNLVDESVPIGV 115
Query: 188 EDCSI--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
++ + IRK PS F+F + DH + + LD+ D + AA+V+G++FYYLKN+ V L
Sbjct: 116 DENANKEIRKWGTIPS-FDFKINDHIDISENLDLVDLERAAKVAGARFYYLKNDLVRLNQ 174
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
LI++ L + K+ ++ + P ++ +E +Y I+ D +IGT+E
Sbjct: 175 SLIHYGLDFLAKKEYSLIQPPYMINRESMEGAVIADDFEEV-IYKIDDEDLYMIGTSEHA 233
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ +H I+ LPL+YA S CFR EAGA G +G++RVHQF K+E FVF +PE+S
Sbjct: 234 MAAMHSKEIIEGKDLPLRYAGISPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVFSRPEDS 293
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLLLF 392
HE+++ E+ Y SL + ++++L
Sbjct: 294 RKEHEKMLAASEEFYQSLEIPYRIMLL 320
>gi|427391064|ref|ZP_18885470.1| serine-tRNA ligase [Actinobaculum massiliae ACS-171-V-Col2]
gi|425732402|gb|EKU95212.1| serine-tRNA ligase [Actinobaculum massiliae ACS-171-V-Col2]
Length = 423
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 173/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAV-SANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D + +R+N E + + ++ N A ++ +LE + + E + R +N V+ +
Sbjct: 2 LDIRLVRENPELIRQSQLKRGNDPATVDALLEADVERRSALAEFETARGRQNEVSRSIS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER +I E K L + + LE + + ++ I N+ VP G E S
Sbjct: 61 KASKEERPAIIAEAKQLSDRVKELEAVAAEAEEAAKRANAVIENVVLDGVPAGDESKSEE 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ +G P F F KDH + + D D + A+VSGS+FYY+K LE L N
Sbjct: 121 IEVIGTPRDFAAEGFEPKDHLDVAERFDAVDMERGAKVSGSRFYYMKGVGARLEWALFNM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + +RG+ + TP IV ++ GF ++ ++Y + DQ L+GT+E+ + G H
Sbjct: 181 AMDQARERGYVLMNTPTIVNPDIMAGTGFLGEHSD-EIYYLNADDQYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL S P++Y+ FS C+R EAG+ G TRG+ RVHQF+K+EMFVFC+ E++++ H+
Sbjct: 240 KDEILDLSAGPIRYSGFSACYRREAGSYGKDTRGIIRVHQFNKVEMFVFCKQEDAEAEHQ 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ +E+++ + + L +L
Sbjct: 300 RLLAMEKEMLAKVELPIHVL 319
>gi|390933698|ref|YP_006391203.1| seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569199|gb|AFK85604.1| Seryl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 423
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 179/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA-NKMKG 133
+D K IR+N + V I + N+N++ LE+ EK + KE++ L+ RN + N K
Sbjct: 2 LDIKRIRNNPDEVKKAIELKKENSNIDEFLEIDEKRREILKELESLKNTRNKESENIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + ++LI+E K + + + +E ++ + ++L++ IPN+ H VPVG D +
Sbjct: 62 KKEGKDAEELIKEMKEISDKIKAMEGEVKQYDEKLEELLWTIPNIPHESVPVGDSDADNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G F+F VK H+ +G L + DF+AA+ V+GS+F + K LE LIN+ +
Sbjct: 122 EIRRWGEVREFDFEVKPHWDIGVELGLLDFEAASRVTGSRFTFYKGLGCRLERALINFMM 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 182 DLHTEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
++I+ LP+ A+S CFR EAG+AG TRGL R HQF+K+E+ +PE+S E+
Sbjct: 241 ETIIDGEKLPIYNCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKITEPEKSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ ED+ +LG+ ++++
Sbjct: 301 MVSDAEDVLKTLGIPYRVV 319
>gi|284163661|ref|YP_003401940.1| seryl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
gi|284013316|gb|ADB59267.1| seryl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
Length = 459
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 182/333 (54%), Gaps = 21/333 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM--- 131
ID ++R+N E V + +R ++ +LE +LE+ E+ ++ + D LR ERN + ++
Sbjct: 2 IDRTYLRENPEEVREALDDRGADVDLEEILEIDERWRELKAKGDELRHERNQITQQIGEL 61
Query: 132 --KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GE 188
+GK E ER++ IE+ K LK + +E + +L DEL + +P + VP G E
Sbjct: 62 VAEGKDE--EREEAIEQSKELKSEIEDIETEADELKDELDERLLEVPQIPDESVPKGVDE 119
Query: 189 DCSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
++ + G + P V H++LG+ LDI D AA+ +GS FY+LK LE
Sbjct: 120 RHNVEDRRWGFDDSHDLPEEVTPHYELGEELDIIDEQRAAKTTGSGFYFLKGAGAQLEHA 179
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQC 297
LI + + ++G+ L P V+SS + G P+ G+N + Y E D
Sbjct: 180 LIQFMMDLHREQGYVDLFPPIPVKSSSMRGTGQLPKFADDAYRLGGSNEEDY--EDEDLW 237
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L TAE+PV ++ D IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 238 LCPTAEVPVTNMYADEILLQDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELV 297
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PEES E L+ E++ LGL +++L
Sbjct: 298 NFVEPEESYDRLENLLDEAEEVLRQLGLPYRIL 330
>gi|255727556|ref|XP_002548704.1| hypothetical protein CTRG_03001 [Candida tropicalis MYA-3404]
gi|240134628|gb|EER34183.1| hypothetical protein CTRG_03001 [Candida tropicalis MYA-3404]
Length = 463
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 19/302 (6%)
Query: 98 ANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-GKLEPSERQKLIEEGKNLKEGLVT 156
+N ++ +ELY +M N L+ ERN ++ +K G + + ++ +EE +K L
Sbjct: 65 SNRKIQIELYNQMNN-------LKRERNEISESLKRGTGDLAMVKQRLEE---IKSELKP 114
Query: 157 LEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR----KTVGNPSVFNFPVK-DHF 211
LE+ +L +E+ +A+ +PN + P SI + K+V +P + K DH
Sbjct: 115 LEKKWKELDEEIYIKAEALPNHVSQNAPEDPLKESIDQFINCKSVNDPKLTPESSKYDHK 174
Query: 212 QLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRS 271
+G+ L I DF A+ VSG +YYL + +LE L+ + LS+ K G+T + P IVRS
Sbjct: 175 TIGEELKIIDFQKASNVSGPSWYYLIGDGALLEQALVQYALSKARKHGYTMVIPPSIVRS 234
Query: 272 SVVEKCGFQPRGANT--QVYSIEGADQCLIGTAEIPVGGIHMDSILSE-SLLPLKYAAFS 328
+V CGF+P N Q+Y +E + L GTAEIP+ H +I SE + P KY S
Sbjct: 235 EIVNACGFKPNDQNNEKQIYELEDEKKSLTGTAEIPLAAFHASTIFSEDASFPKKYVGVS 294
Query: 329 HCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFK 388
+R EAGA+G T+GLYRVH+F+K+E+F F PE S ++L +++ ++ + LGL K
Sbjct: 295 RSYRAEAGASGRDTKGLYRVHEFTKVELFHFTTPERSSEELQQLKQMQVEIITELGLAAK 354
Query: 389 LL 390
+L
Sbjct: 355 VL 356
>gi|226947753|ref|YP_002802844.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
gi|226844320|gb|ACO86986.1| serine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ +++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRDIKPEADNLRAKRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L ++ + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKGEAEELKKQVTAASDHLAELEKGESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|152973866|ref|YP_001373383.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|189083557|sp|A7GJT0.1|SYS_BACCN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|152022618|gb|ABS20388.1| seryl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 424
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R N E V +++R + A+ E EL K + + + L+ +RN V+ ++
Sbjct: 2 LDIKFLRANFEEVKEKLQHRGEDLADFECFEELDTKRRELLVQTEELKSKRNEVSQQISM 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + + LI E + + E + L+ +L ++ ++L++ IPN+ H PVG ED +
Sbjct: 62 LKREKKDAEALILEMREVGEKIKGLDNELREVEEDLERLMLSIPNIPHESTPVGETEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ +T G FNF K H+ L L I DF+ A +V+GS+F + K LE LI++
Sbjct: 122 VVVRTWGEVKEFNFEPKPHWDLATDLGIVDFERAGKVTGSRFVFYKGAGARLERALISFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + G+ + P +V + + G P+ + IE D LI TAE+PV +H
Sbjct: 182 LDLHTEEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFLIESEDYFLIPTAEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP++YAAFS CFR+EAG+AG TRGL R HQF+K+E+ F +PEES E
Sbjct: 241 RDEILSAEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEESYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L ++++
Sbjct: 301 KLTNDAERVLQLLELPYRVM 320
>gi|401888153|gb|EJT52118.1| seryl-tRNA synthetase [Trichosporon asahii var. asahii CBS 2479]
Length = 366
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 167/325 (51%), Gaps = 11/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLEL---YEKMLNVQKEVDRLREERNAVANKM 131
+D+ + + EA + N+R R ++V EL E+ L+++ +++R R E+ + +
Sbjct: 42 LDYARLLSDPEATARNVRERAMPLPSDVVAELGRLREQALSLETQLNRTRHEQGLASASL 101
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
+ + + + + LKE + LE + ++ D L + A +PN ++P P+G E+ +
Sbjct: 102 RDTKDKDGKAAAVARARELKEAVQALEREHREVEDTLLRVAGSLPNFSNPAAPIGAEENA 161
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+T G + P++DH + D A+A +G+ + +L LE L+ +
Sbjct: 162 TTLETFGPERLPASPLRDHVDVADRFGWLDNAASAIATGTSWPFLLGALAQLEHALVGYA 221
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR-----GANTQVYSIEGADQ---CLIGTAE 303
+ + GFTP++ P++V + +CGFQPR A Q Y+IE + CL GTAE
Sbjct: 222 VDMAAREGFTPVSPPDVVAVDIAARCGFQPRDGPGEDAPRQTYTIESEGERQLCLTGTAE 281
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+P+ + + L +P + FR EAGA G TRGLYRVHQF+K+E+F E
Sbjct: 282 VPLAALWANRTLGADQMPARVVGVGKAFRAEAGARGADTRGLYRVHQFTKVELFAVTTAE 341
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFK 388
+S+ EEL +++ + LGL +
Sbjct: 342 QSEGVMEELRALQKRIIEGLGLSVR 366
>gi|148378513|ref|YP_001253054.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153934301|ref|YP_001382901.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153937368|ref|YP_001386467.1| seryl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|148287997|emb|CAL82064.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152930345|gb|ABS35845.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152933282|gb|ABS38781.1| serine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ +++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRDIKPEADNLRAKRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L ++ + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQEKKGEAEELKKQVTAASDHLAELEKGESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|313900857|ref|ZP_07834347.1| serine--tRNA ligase [Clostridium sp. HGF2]
gi|312954277|gb|EFR35955.1| serine--tRNA ligase [Clostridium sp. HGF2]
Length = 428
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 180/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + +ELV + + ++ ++++ D LR +RNA++ ++
Sbjct: 2 LDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDL-------VKLTDELQQEAQCIPNMTHPDVP 184
G + + L +E +K + T+ +++ +L +++++ IPN+ HP VP
Sbjct: 62 GGLMA----KGLKDEANAIKAKVQTMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
VG +D + + G P + +F + H + + + D D+A +V+G+ FYYL + L
Sbjct: 118 VGKDDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT + P ++RS+VV +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYVVPPFMIRSNVVTGV-MSFAEMEGMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+IL E LP Y ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + +L DL+ SL + + L
Sbjct: 297 ESADWFVKLYTNTVDLFRSLDIPVRTL 323
>gi|300814304|ref|ZP_07094576.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511571|gb|EFK38799.1| serine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 429
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 174/324 (53%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR N E V NI+ + + L+LV +EL +K + D LR +RN+++ ++
Sbjct: 2 LDIKLIRTNPELVKENIKKKFQDEKLKLVDEVIELDKKNREAKNHGDELRAKRNSISKEI 61
Query: 132 KGKLEPSERQKL----IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
G ++ ++ K +E K KE L TLEE+ KL +E++Q IP + VP+G
Sbjct: 62 GGFMKNGQKDKAESAKLEVAKINKE-LETLEEEQKKLDEEVRQRMLVIPQIIDETVPIGK 120
Query: 188 EDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+D + + G P++ ++ + H + + D D D++ SG+ FYYLK + L
Sbjct: 121 DDSENVEIEKFGEPAIPSYEIPYHVDIIETFDGIDLDSSRNTSGAGFYYLKGDIARLHSA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
++++ +I RGFT P ++RS VV N +Y IEG D LIGT+E +
Sbjct: 181 ILSYARDFMIDRGFTYYIPPFMIRSDVVTGVMSFAEMENM-MYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +++I + +PL ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 240 IGKFINTITDQDKMPLTMTSYSPCFRKEVGAHGIEERGIYRIHQFEKQEMVVICKPEDSK 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ E L R D + SL + + L
Sbjct: 300 KWFENLWRNTVDFFRSLEIPVRTL 323
>gi|212527508|ref|XP_002143911.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
gi|210073309|gb|EEA27396.1| seryl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
Length = 522
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 189/358 (52%), Gaps = 39/358 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLEL---VLELY-------EKMLNVQKEVDRLR 121
K D K IR++ + + N NRN A E + ELY E +L+ ++++ L
Sbjct: 42 KPVPDVKLIREHADLFARNCVNRNYAAYEEYPHRISELYAETKRLEEALLDPRRKIKELE 101
Query: 122 EE--RNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
+E R AV + G+ + + +L +E +NLK+ L E+Q+ A +PN+T
Sbjct: 102 KEIGRVAVNRESNGEEKKQKLAELRKEAQNLKKDSQDTLLRKESLESEIQKLALSLPNLT 161
Query: 180 HPDVPVGGED--CSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFY 234
P+ PVG E I + S + P + H ++G L++ DF +A +G +Y
Sbjct: 162 SPEAPVGDEPRVVGYINYDPKDSSSWLKNKQPYRSHVEIGTKLELLDFTCSATSTGWGWY 221
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT--QVYSIE 292
+L NE +LE LI +++S +KR F P++ P IV S + E CG+QPR N Q++ IE
Sbjct: 222 FLINEGALLEQALIQYSMSVAMKRKFKPVSPPSIVYSYIQEACGYQPRDQNNEQQIWHIE 281
Query: 293 GADQ-------CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGL 345
+++ L GTAEIP+ ++ + ESLLPLK+ S C+R EAGA G T+GL
Sbjct: 282 QSEKDKARPQRSLAGTAEIPLAAMYAGRDIDESLLPLKFVGTSRCYRAEAGARGVDTKGL 341
Query: 346 YRVHQFSKLEMFVFCQPEESDSYH-------------EELIRIEEDLYSSLGLHFKLL 390
YRVH+F+K+E+F + SD+ EEL +I+ ++ ++L L ++L
Sbjct: 342 YRVHEFTKVELFGWSNNPRSDASDPLFEKCTPLNELFEELGQIQVEVLTALNLPCRIL 399
>gi|153940879|ref|YP_001389876.1| seryl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|384460942|ref|YP_005673537.1| serine--tRNA ligase [Clostridium botulinum F str. 230613]
gi|152936775|gb|ABS42273.1| serine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|295317959|gb|ADF98336.1| serine--tRNA ligase [Clostridium botulinum F str. 230613]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 179/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ N++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAKRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L ++ + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKGEAEELKKQVTVASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVI 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + S + + L
Sbjct: 301 WYDKLWQNTVDFFRSFDIPVRTL 323
>gi|373119654|ref|ZP_09533747.1| serine-tRNA ligase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371662097|gb|EHO27309.1| serine-tRNA ligase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 433
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 174/328 (53%), Gaps = 13/328 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K+IR+N +AV NI+ + L LV LEL + +E LR RNA + ++
Sbjct: 2 LDIKFIRENPDAVKENIKKKFQEQKLPLVDQVLELDAENRRTIQEAQELRTARNAKSKQV 61
Query: 132 -----KGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+ K +PS E + L E K + L LE +L ++L+ IPN+ P V
Sbjct: 62 GVLMGQSKKDPSKLAEAEALKAEVKADADRLAFLEGRETELAEQLRHILLQIPNIIDPSV 121
Query: 184 PVGGED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P+G +D C++ + G +V F + H Q+ ++ D D DAA VSG+ FYYL +
Sbjct: 122 PIGPDDSCNVEVQRFGEATVPGFEIPYHTQIMESFDGIDMDAAGRVSGAGFYYLMGDIAR 181
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L ++ + +I +GFT P ++ +VVE Q + +Y IEG D LIGT+
Sbjct: 182 LHEAVLAYARDFMIDKGFTFCIPPFMIHGNVVEGVMSQTE-MDAMMYKIEGEDLYLIGTS 240
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+P
Sbjct: 241 EHSMIGKFIDQIIPEDKLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCRP 300
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES ++E++ R +L+ SL + + L
Sbjct: 301 EESMDWYEKMWRWSVELFRSLDIPVRQL 328
>gi|225026108|ref|ZP_03715300.1| hypothetical protein EUBHAL_00349 [Eubacterium hallii DSM 3353]
gi|224956569|gb|EEG37778.1| serine--tRNA ligase [Eubacterium hallii DSM 3353]
Length = 428
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 175/325 (53%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + L LV +EL + Q+E D LR R ++ ++
Sbjct: 2 LDLKFVRENPEVVKQNIRNKFQDEKLPLVDEVIELDAQRRATQQEADDLRSNRKKISKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E ++ K E+ E L LE+ +L +++++ IPN+ P VP+G
Sbjct: 62 GALMAQGKKEEADAVK--EQVTKNAERLAELEKLEAELGEKVKKIMMIIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V +F V H + + D D D+A +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIQKYGEPFVPDFEVPYHTDIMERFDGIDLDSARKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 180 AVISYARDFMIDRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D++L LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 239 MIGKFIDTVLPSDTLPRTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEDS 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ S+ + + L
Sbjct: 299 KMWFDKLWQNTVDLFRSMDIPVRTL 323
>gi|160879264|ref|YP_001558232.1| seryl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|160427930|gb|ABX41493.1| seryl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 425
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 176/328 (53%), Gaps = 18/328 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ + L LV E+ + N + E D LR +RNA++ K+
Sbjct: 2 LDLKFVRENPEVVRQNIKNKFQDHKLPLVDEVIALDVESRNAKGEADNLRADRNAISKKI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLT----DELQQEAQCI----PNMTHPDV 183
G + +R EE + +K+ LVT E + + +ELQ+ + I PN+ V
Sbjct: 62 GGLMAQGKR----EEAEEMKQ-LVTKESERLAELEERENELQERIKTIMMTLPNIIDASV 116
Query: 184 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P+G +D + K G P V +F + H ++ + + D D+A +V+G+ FYYL +
Sbjct: 117 PIGKDDSENVEIKRYGEPVVPDFEIPYHAEIMEKFNGLDLDSARKVAGNGFYYLMGDIAR 176
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L +I++ +I RGFT P ++RS VV + +Y IEG D LIGT+
Sbjct: 177 LHSAVISYARDFMIDRGFTYCIPPFMIRSDVVTGV-MSFAEMDAMMYKIEGEDLYLIGTS 235
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C P
Sbjct: 236 EHSMIGKFIDTILPEETLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCNP 295
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
E+S + E+L DL+ SL + + L
Sbjct: 296 EDSMMWFEKLWENTVDLFRSLDIPVRTL 323
>gi|308179597|ref|YP_003923725.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|418274171|ref|ZP_12889669.1| serine-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|308045088|gb|ADN97631.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|376009737|gb|EHS83063.1| serine-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 423
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 182/318 (57%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V A ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 5 KFVRNNSELVKAKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 63
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 64 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 123
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F F K H++LG++L I DFD AA+V+G++F Y K+ +LE + ++ L
Sbjct: 124 MRKHGDIPTFEFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSFMLD 183
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 184 LHIQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 242
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 243 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 302
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 303 TDNAEEVLRELGLAYHVI 320
>gi|238917966|ref|YP_002931483.1| seryl-tRNA synthetase [Eubacterium eligens ATCC 27750]
gi|238873326|gb|ACR73036.1| seryl-tRNA synthetase [Eubacterium eligens ATCC 27750]
Length = 429
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 172/326 (52%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+N+ + L LV +EL K Q E D LR RN ++ ++
Sbjct: 2 LDLKFVRENPDIVKQNIKNKFQDRKLPLVDEVIELDAKARATQTEADELRANRNKLSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K K L LE D +L +++ + IPN+ P VP+G
Sbjct: 62 GALMAQGKKEEAEAVKAQVSADAAK--LAELEADEKELNEKITKIMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V +F V H + + + D DAA +V+G+ FYYL + L
Sbjct: 120 KDDSENVEIEKFGEPVVPDFEVPYHTDIMERFNGIDMDAAGKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 180 AIISYARDFMIDRGFTYCIPPYMIRSNVVTGVMSFDEMDA--MMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTITPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S + ++L + D + ++ + + L
Sbjct: 298 SKMWFDKLWKNTVDFFRTMDIPVRTL 323
>gi|358465762|ref|ZP_09175660.1| hypothetical protein HMPREF9093_00119 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069729|gb|EHI79609.1| hypothetical protein HMPREF9093_00119 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 421
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 177/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K V EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDAFVELDAKRREVLSEVESLKRERNNVSAEIATL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G ED ++
Sbjct: 62 KKEKKDANHLIEKMGGVSSKIKELDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDEDHNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P FNF K H+ +G+ L I DF+ A++SGS+F + A LE +IN+ L
Sbjct: 122 EIRKWGVPRKFNFEPKSHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERAIINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E + L L ++++
Sbjct: 300 MVNNAETILQRLELPYRVI 318
>gi|392391701|ref|YP_006428303.1| seryl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522779|gb|AFL98509.1| seryl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 421
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 174/318 (54%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E + ++ RNSN +LE L+ E + EV+ L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRTNPEIIKEALKKRNSNVSLEGFLKQEEDRRKLLFEVESLKAKRNTVSEEVGRR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + ++LI E + + + + LE+ L + ++ IPN+ H VPVG E +I
Sbjct: 62 KKHGEDAEQLIIEMREVGQEIKDLEDKLGDIEKSMETVLYEIPNIPHESVPVGIDETANI 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F H+++G+ LDI DF A +V+G++F + K LE LI++ L
Sbjct: 122 QARSWGAPRSFDFEPLPHYEIGEKLDILDFARAGKVTGARFTFYKGLGAKLERALISFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
++G+ + P +V + + G P+ + + G D LI TAE+PV ++ +
Sbjct: 182 DRHTEKGYVEVLPPYMVHRNSMIGTGQLPK-FEEDAFKVAGTDYFLIPTAEVPVTNMYRE 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F PE S E L
Sbjct: 241 EILEADQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFALPENSYEELESL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 301 TRDAESILQELELPYRVM 318
>gi|451947471|ref|YP_007468066.1| seryl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451906819|gb|AGF78413.1| seryl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 425
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 184/324 (56%), Gaps = 9/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
++ ++IR+N + V +R ++ + +K L++ +EV+ L+ +RN + ++
Sbjct: 2 LELRFIRENLDLVRKKTAHRGIPTDKVDEFASVDQKRLDLLQEVESLKNKRNIASKEIAQ 61
Query: 134 KLEPSERQK-----LIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ S+ K LI E + E + L+++L ++ D LQ IPN+ DVP G +
Sbjct: 62 LKQGSDEDKKQADTLIPEMRKASERIKELDKELGEIQDSLQDLVLSIPNLCSDDVPKGDD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + KT G+ VF+F K H+++G+ LDI DF+ AA++SG++F LK A +E L
Sbjct: 122 DSANVEFKTWGDKPVFSFEPKPHWEVGEDLDILDFERAAKLSGARFALLKGFASKMERAL 181
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
N+ L K G+ + P +V S+ + G P+ A +++I+ D LI TAE+PV
Sbjct: 182 TNFMLDLHTQKHGYEEVLPPFLVNSASMTATGQLPKFAE-DLFAIKDWDLYLIPTAEVPV 240
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
I+ D L E+ LP+K+ A++ CFR+EAG+ G T+GL R HQF K+E+ F PE S
Sbjct: 241 TNIYRDETLDENQLPVKFTAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSA 300
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E L+ E++ LGLH++++
Sbjct: 301 QELESLLADAEEVLQLLGLHYRVV 324
>gi|373458134|ref|ZP_09549901.1| Seryl-tRNA synthetase [Caldithrix abyssi DSM 13497]
gi|371719798|gb|EHO41569.1| Seryl-tRNA synthetase [Caldithrix abyssi DSM 13497]
Length = 427
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 182/323 (56%), Gaps = 4/323 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K+IR+N E V I+ + +++ +LEL ++ + +EV+ L+++RN + K+ +
Sbjct: 2 LDLKFIRENPETVKKGIQAKGEMGDVDRILELDQRRRQIIQEVENLKKQRNENSKKVAQY 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + ++IE + + E + L+E+L +L ++L ++ IPN+ HP P+G + +
Sbjct: 62 KKEGKDAAEIIEHTRQISETIKGLDEELKELEEQLSEQLSRIPNLPHPSTPIGTDASENV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
G F F ++H ++G+ LDI DF +V+GS F K + LE LIN+ L
Sbjct: 122 EVNQWGELPQFEFTPRNHLEIGERLDILDFKRGGKVTGSGFPVYKGDGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K G+T + P + + G P+ +Y E D LI TAE+PV +H
Sbjct: 182 DFHIEKHGYTEIFPPFLANRESMYGTGQLPK-LEEDMYLAEKDDLFLIPTAEVPVTNLHR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL + LP+KY A+S CFR EAG+ G TRG RVHQF+K+EM F P++S +HE+
Sbjct: 241 GEILDGADLPIKYVAYSACFRREAGSYGKETRGFLRVHQFNKVEMVNFVHPDKSYEFHEQ 300
Query: 372 LIRIEEDLYSSLGLHFKLLLFLA 394
L+R ++ +L L +++LL +
Sbjct: 301 LLREACEILEALELPYRVLLLCS 323
>gi|163841951|ref|YP_001626356.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|162955427|gb|ABY24942.1| seryl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 446
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 172/321 (53%), Gaps = 8/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + +N E A+ R R ++ + ++ + + + LR E+NA ++
Sbjct: 22 IDVKDLNENPEKYRASQRARGDKESMVDAIISADQSRKSAITSFEALRAEQNAFGKRVAA 81
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQE-AQCIPNMTHPDVPVGGEDCSI 192
+ E+Q+L+ + K+L V L Q E + PN+ VP G ED
Sbjct: 82 A-KGEEKQELLAQVKDLA-ARVKASSAAADLAQGEQDELVRAFPNLIIDGVPTGDEDDFA 139
Query: 193 IRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ KTVG P F F +DH ++G+ + D + A+VSG++F +LK LE+ L+N
Sbjct: 140 LVKTVGEPRDFAAAGFAPRDHLEIGELIGGIDMERGAKVSGARFSFLKGPVARLEIALMN 199
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + GF P+ TP +VR + GF + + ++Y +E D L+GT+E+ + G
Sbjct: 200 MALDQATSYGFIPMITPTLVRPETMAGTGFDVK-HDDEIYRLEKDDLYLVGTSEVALAGY 258
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D I+ S P++YA +S C+R EAG+AG TRG+ RVHQF+KLEMF + EE+++ H
Sbjct: 259 HSDEIIDLSKGPIRYAGWSSCYRREAGSAGKDTRGIIRVHQFNKLEMFAYIPLEEAEAEH 318
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++ EE++ L + ++++
Sbjct: 319 ARMLAWEEEMLGKLEVPYRVI 339
>gi|419694382|ref|ZP_14222347.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380670734|gb|EIB85979.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 411
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 182/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F +K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTLKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|355670255|ref|ZP_09057110.1| seryl-tRNA synthetase [Clostridium citroniae WAL-17108]
gi|354816327|gb|EHF00915.1| seryl-tRNA synthetase [Clostridium citroniae WAL-17108]
Length = 429
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 174/323 (53%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVA--- 128
+D +++R+N + V NI+N+ ++ L LV E L + + QKE D LR RN ++
Sbjct: 2 LDLRFVRENPDIVRQNIKNKFQDSKLPLVDEVIALDAEFRSAQKEADDLRASRNKLSKEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K+ G+ + E + + + E L LE +L++++ + IPN+ P VP+G +
Sbjct: 62 GKLMGQGKKEEAEAVKAQVSANSERLAELETKEGELSEQILKIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + + D DAA V+G+ FYYL + L +
Sbjct: 122 DSENVEVERFGEPVVPDFEIPYHTEIMERFNGIDLDAARRVAGNGFYYLMGDIARLHSSV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTITPEEQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+++ L + DL+ SL + + L
Sbjct: 301 WYDRLWQNTVDLFRSLDIPVRTL 323
>gi|154503064|ref|ZP_02040124.1| hypothetical protein RUMGNA_00886 [Ruminococcus gnavus ATCC 29149]
gi|153796305|gb|EDN78725.1| serine--tRNA ligase [Ruminococcus gnavus ATCC 29149]
Length = 433
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 183/330 (55%), Gaps = 16/330 (4%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA 128
K +D K++R N E V NI+N+ ++ L LV LEL +K ++ EV+ LR E+N +
Sbjct: 4 KIMLDIKFVRSNPEVVKQNIKNKFQDSKLPLVDEVLELDQKNREIKGEVEALRAEKNKTS 63
Query: 129 NKM-----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHP 181
++ +GK E +E ++K+ E ++ L + ++ +++++ IPN+ P
Sbjct: 64 KQIGAMMAQGKKEEAEELKRKVTESADKME----ALSAEEKEVEEKIKKIMMTIPNIIDP 119
Query: 182 DVPVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEA 240
VP+G +D + + G P V +F V H ++ + + D D+A +V+G+ FYYL +
Sbjct: 120 SVPIGKDDSENVELERFGEPVVPDFEVPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDI 179
Query: 241 VMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIG 300
L +I++ +I RGFT P ++RS+VV + +Y IEG D LIG
Sbjct: 180 ARLHSAVISYARDFMINRGFTYCIPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIG 238
Query: 301 TAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC 360
T+E + G +D++L E LP ++S CFR E GA G RG+YR+HQF K EM V C
Sbjct: 239 TSEHSMIGKFIDTLLPEEQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVC 298
Query: 361 QPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
+PEES ++E+L + DL+ S+ + + L
Sbjct: 299 KPEESMDWYEKLWKNTVDLFRSMDIPVRTL 328
>gi|385802053|ref|YP_005838456.1| serine--tRNA ligase [Gardnerella vaginalis HMP9231]
gi|333393647|gb|AEF31565.1| serine--tRNA ligase [Gardnerella vaginalis HMP9231]
Length = 428
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLSMEQEMLAKVEVPYRII 320
>gi|288561203|ref|YP_003424689.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
gi|288543913|gb|ADC47797.1| seryl-tRNA synthetase SerS [Methanobrevibacter ruminantium M1]
Length = 425
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 174/322 (54%), Gaps = 3/322 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K R+N + + + + R S N E V+E + ++ LR E+N ++ K
Sbjct: 2 LDIKLFRENPDLIFDSEKKRFRSTENAEKVIEYDTLWREGESRLNSLRAEKNKLSKSFKQ 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
+ +++I + K + E + L + + + + N+ DVPV ED ++
Sbjct: 62 AKKDGNIEEVIAQSKAVAEEIKELGPKIEEYKQLREDYRYKVGNIIDEDVPVSDTEDDNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I +TVG F+F +H L + +D D + AA ++G++FYYLK + + L + LI + L
Sbjct: 122 IVRTVGELPDFDFEPLNHVDLIEKIDGADIETAASIAGARFYYLKRDILHLNLALIQFAL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+E+ +RG+ PL TP V+ V + T +Y +E D LI TAE + +H D
Sbjct: 182 NELEERGYIPLQTPFFVKGEVAAETSELGEFEET-LYKVENEDLYLIATAEQTLAALHRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I++ LP++Y A S CFR EAG+ G T G++RVHQF K+E F+F PEES + H L
Sbjct: 241 EIINPEDLPMRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKIEQFIFSTPEESKNEHHRL 300
Query: 373 IRIEEDLYSSLGLHFKLLLFLA 394
+ + ED+Y LGL ++++ ++
Sbjct: 301 LEVTEDIYKKLGLPYQIVAIVS 322
>gi|386773010|ref|ZP_10095388.1| seryl-tRNA ligase [Brachybacterium paraconglomeratum LC44]
Length = 423
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 171/317 (53%), Gaps = 3/317 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RDN + V A R R + + ++ VLE + + R E+ A K+
Sbjct: 2 IDLRLLRDNPDVVRAAQRARRRDASTVDAVLEADSRWREATSAFESARAEQKAFGKKVS- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+Q L+ E K L + LE + + + IPN+ P G E+ ++
Sbjct: 61 QATGEEKQALLAEVKQLAADVKRLEAESGEALAVRDAALREIPNLAE-GAPEGLEEDFVL 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
R+TVG F+F +KDH ++ + L D A+VSG++FY+L+ LE+ ++N +
Sbjct: 120 RETVGETPSFDFEIKDHLEIAEGLKAIDMARGAKVSGARFYFLRGVGAQLELAILNSAID 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ K GFTP+ TP +V +E GF A+ + +G D L+GT+E+ + H D
Sbjct: 180 QATKAGFTPMITPTLVLPEAMEGTGFLGEHADEVYHLDKGDDLYLVGTSEVALASYHKDE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S P++YA +S C+R EAG+ G TRG+ RVHQF K+EMF +C+ E+S HE L+
Sbjct: 240 ILDLSGGPIRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYCRIEDSYEEHERLL 299
Query: 374 RIEEDLYSSLGLHFKLL 390
E ++ + + + ++++
Sbjct: 300 DWEREMMARIDVPYRII 316
>gi|218961936|ref|YP_001741711.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
gi|167730593|emb|CAO81505.1| seryl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 419
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 170/319 (53%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V I N+N A+L+ +LE+ E+ +Q E D L+ +N+V+ + K
Sbjct: 2 LDIKFIRNNIELVRQAISNKNEKADLDKLLEIDEQRRQLQFEFDYLKAHQNSVSALIAQK 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ E + ++ E + L L + EL++ IPN+ DVPVG E +
Sbjct: 62 KKTGENIENELKAMTKTAEEIKALSAQLSIVNGELEKLLLTIPNIPQEDVPVGKDESANK 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I K G P F+F KDH +L + D A++SGS F E +E LIN+ L
Sbjct: 122 IIKIWGEPKQFSFTPKDHLELAIQNKLLDLPRGAKISGSGFPLYTGEGARIERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ K +T L P IV + G P+ +Y IE D LI TAE+PV I
Sbjct: 182 EFHLQKHNYTELMAPVIVNRKTMTGTGQLPK-LEEDMYRIEKDDLFLIPTAEVPVTNIFA 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D +LS LP K+ A++ CFR EAG+ G T+GL R+HQF+K+E+ F +PE+S E+
Sbjct: 241 DEVLSYKDLPQKFVAYTPCFRREAGSYGKETKGLQRLHQFNKVELVHFTEPEKSAEALEQ 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ ED+ + LH++++
Sbjct: 301 ILSDAEDILQAFNLHYRVV 319
>gi|355703525|gb|EHH30016.1| hypothetical protein EGK_10583 [Macaca mulatta]
Length = 520
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 140/234 (59%), Gaps = 6/234 (2%)
Query: 162 VKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFD 221
+L ++ +A +PN THPDVPVG E + + VG+ F+F + H ++G+ LDI
Sbjct: 159 AQLEEQFYLQALKLPNQTHPDVPVGDESQAQVLHVVGDKPAFSFQPRGHLEIGEKLDIIR 218
Query: 222 FDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQP 281
+ VSG + YYL+ +L+ GL+N+T +++++RGFTP+T P+++R +V E CG P
Sbjct: 219 QKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTP 278
Query: 282 RGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAA 338
+ +Y+I+ A D L GTAE+ + G MD ++ LP++ S C+R E
Sbjct: 279 NANPSHIYNIDPARFEDLNLAGTAEVGLAGYFMDHAVAFRDLPVRMVCSSTCYRAETN-T 337
Query: 339 GTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
G RGLYRVH F+K+EMF P E+S EE + ++ ++ + LGLHF++L
Sbjct: 338 GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVL 391
>gi|392947725|ref|ZP_10313356.1| Seryl-tRNA synthetase [Lactobacillus pentosus KCA1]
gi|334881233|emb|CCB82070.1| seryl-tRNA synthetase 1 [Lactobacillus pentosus MP-10]
gi|339637677|emb|CCC16638.1| seryl-tRNA synthetase 1 [Lactobacillus pentosus IG1]
gi|392437055|gb|EIW14948.1| Seryl-tRNA synthetase [Lactobacillus pentosus KCA1]
Length = 423
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 181/318 (56%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V A ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 5 KFVRNNPELVKAKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 63
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 64 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 123
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F K H++LG++L I DFD AA+VSG++F Y K+ +LE + ++ L
Sbjct: 124 MRKHGEIPTFDFKPKAHWELGESLGILDFDRAAKVSGARFVYYKDAGALLERAVYSFMLD 183
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 184 LHTQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 242
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 243 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 302
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 303 TDNAEEVLRELGLAYHVI 320
>gi|383752995|ref|YP_005431898.1| putative seryl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365047|dbj|BAL81875.1| putative seryl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 423
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 176/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANK---M 131
+D K++R++ + V ++NR + NL+ L ++ N+ ++ + L+ ERNAV+ + M
Sbjct: 2 LDIKFVREHLDEVKEMLKNRCNPLNLDDFSALEQERRNLLQQTETLKAERNAVSKEISVM 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K E ++ + I E + + E + L+ DL + ++L+ IPNM DVP+G +D
Sbjct: 62 KKNKENADDK--IAEMRAVGEKISALDADLKDVEEKLRDILLHIPNMPKADVPIGKDDTE 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+RK G P F+F K H+ +G LDI D D AA+V+G++F + K LE IN
Sbjct: 120 NPEVRKW-GTPKEFSFEPKAHWDIGTDLDILDADRAAKVTGARFMFYKGLGARLERACIN 178
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + K G+T + P I + G P+ A ++ +EG D L+ TAE+P
Sbjct: 179 FMMDLHATKHGYTEMLAPYIANKDSMTGTGQLPKFAE-DMFKLEGQDYYLVPTAEVPTTN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
H D IL LP Y+A++ CFR EAG+AG TRGL R HQF+K+E+ F +PE S
Sbjct: 238 YHRDEILDGDKLPEYYSAYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVKPETSWDE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E ++ ED+ L L + ++
Sbjct: 298 LESMVDAAEDVLRILELPYHVV 319
>gi|310819975|ref|YP_003952333.1| seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393047|gb|ADO70506.1| Seryl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 426
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 170/321 (52%), Gaps = 3/321 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-- 132
+D +++ N +AV A ++ R+ N +L +L+ + + V+ L RNA ++MK
Sbjct: 2 LDLRYVAQNFDAVVARLKARSGNLDLGPFQKLFTERRELYVSVEGLSARRNAANDEMKRK 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
K +P L + + + + + E L ++ +E+ + IPN+ H VP G E +
Sbjct: 62 AKEDPKALDALRGDLRAVSQEIKEKEARLKEVEEEISRILLLIPNIPHESVPTGASEQDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ +T G F F + HF++G+ L + DF+ AA+VSGS+F + K LE L+ +
Sbjct: 122 VVTRTWGEKPDFLFTPRQHFEIGEKLGMLDFERAAKVSGSRFTFYKAALARLERALVTFM 181
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ ++G+T L P +V + G P+ + + ++ LI TAE+PV H
Sbjct: 182 IDVHTQKGYTELLPPYLVLRETMMGTGQLPKFEDDAFKTSGDPERFLIPTAEVPVTNYHS 241
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL LPLKY AFS CFR EAGAAG TRGL R HQF K+E+ F PE S S E
Sbjct: 242 DEILEGGQLPLKYCAFSPCFRAEAGAAGRDTRGLIRQHQFHKVELVKFATPETSLSELEG 301
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
+ D+ LGLH +++L
Sbjct: 302 MTDDACDILRRLGLHHRVMLL 322
>gi|423349280|ref|ZP_17326936.1| seryl-tRNA synthetase [Scardovia wiggsiae F0424]
gi|393702828|gb|EJD65030.1| seryl-tRNA synthetase [Scardovia wiggsiae F0424]
Length = 428
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKML-NVQKEVDRLREERNAVANKMKG 133
+D +++R+N + V + R R + L + Y+K+ + + + R E+ + K
Sbjct: 2 LDIQFVRENPDVVKESQRKRGESVELVDDVLRYDKVRRDSLSDYENTRAEQKRIG-KTVA 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
ER +I K L + +E K T+E + N+ P+ P GGED I+
Sbjct: 61 AASAEERPAIIARTKELAGKVSEYKEAADKATEEYTAAMWKLSNIVEPEAPEGGEDDYIV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG F F K+H +LG+ + D +VSGS+FY+L+ LE+ ++
Sbjct: 121 VKKVGELRDFRAEGFEPKNHLELGEGVAGIDMKRGVKVSGSRFYFLRGAVARLELAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + K GF T P +VR ++ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 GVDQAEKHGFIMATAPTLVRPEIMAGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S PL+YA +S C+R EAG+AG T G+ RVHQF+K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGPLRYAGWSSCYRREAGSAGKDTMGIIRVHQFNKVEMFVYCRQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ L+ +E+++ + + + ++++
Sbjct: 300 QHLLEMEQEMLAKVEVPYRII 320
>gi|323341530|ref|ZP_08081769.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|417973724|ref|ZP_12614564.1| seryl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
gi|323091051|gb|EFZ33684.1| serine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|346329911|gb|EGX98190.1| seryl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
Length = 424
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 175/319 (54%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKM-K 132
+D K IR N + + + R A ++ +LE ++ + E + L+++RN V+ ++
Sbjct: 2 LDIKMIRQNTDEIKERLATRGVKAEKIDALLEKDKRRRELLVETEGLKQKRNEVSAEIAN 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K + I+E + + + +L+E+L ++ ++ A +PN+ +P +PVG E +
Sbjct: 62 AKRNKQDATDAIKEMREVGSKIKSLDEELEEVEATVKDMASRLPNLPNPTIPVGPDESAN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + VG P F+F K H+ +G+ L I DFD A+VSG++F Y K LE + N+
Sbjct: 122 VELRKVGTPREFDFEPKAHWDIGEDLGILDFDRGAKVSGARFVYYKGLGARLERAVYNFM 181
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L E K G+T + P IV + + G P+ VY + G D LI TAE+P+ +
Sbjct: 182 LDEHAKEGYTEMLPPYIVNAQTMYGTGQFPK-FKEDVYQVNGEDMTLIPTAEVPLTNYYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D ++ LP+ + A + CFR+EAG+AG TRGL R+HQF+K+EM F +PE S E+
Sbjct: 241 DEVIPTEKLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKFSKPENSYDELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+ + ++ LGL + ++
Sbjct: 301 MTQNAGNIMEKLGLPYHVI 319
>gi|415716278|ref|ZP_11466305.1| seryl-tRNA synthetase [Gardnerella vaginalis 1400E]
gi|388057540|gb|EIK80369.1| seryl-tRNA synthetase [Gardnerella vaginalis 1400E]
Length = 428
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|419621953|ref|ZP_14155198.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|380600845|gb|EIB21171.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23216]
Length = 411
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDESVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NMELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|400534954|ref|ZP_10798491.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
gi|400331312|gb|EJO88808.1| seryl-tRNA ligase [Mycobacterium colombiense CECT 3035]
Length = 419
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 171/317 (53%), Gaps = 4/317 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V + +R + +L + +L D LR E+ A A+K G
Sbjct: 2 IDLKQLREDPDVVRRSQLSRGEDPSLVDALLTADAARRAAISSADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER + K+L E + E + N+ VP GGED +
Sbjct: 61 AASPEERPAKLARAKDLAEQVKAAETAQADAEAAFTAAHMALSNVVIDGVPAGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P+ + P KDH +LG++L + D A+VSGS+FY+L + +L++GL+ L
Sbjct: 121 LDVVGEPAAIDNP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGKGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
++ GF P+ P +VR V+ GF A ++Y +E D L+GT+E+P+ G H D
Sbjct: 180 LAVENGFVPMIPPVLVRPEVMAGTGFLGSHAE-EIYRVEADDLYLVGTSEVPLAGYHSDE 238
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELI 373
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L+
Sbjct: 239 ILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRLL 298
Query: 374 RIEEDLYSSLGLHFKLL 390
+ ++ + + + ++++
Sbjct: 299 GWQREMLALIEVPYRVI 315
>gi|257067880|ref|YP_003154135.1| seryl-tRNA synthetase [Brachybacterium faecium DSM 4810]
gi|256558698|gb|ACU84545.1| seryl-tRNA synthetase [Brachybacterium faecium DSM 4810]
Length = 423
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 174/318 (54%), Gaps = 5/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N EAV R R + A ++ VLE + + R E+ + K+
Sbjct: 2 IDLRHLRENPEAVRDAQRARRRDPATVDAVLEADVRWRETTAAFESARAEQKSFGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K L + LE + + + IPN+ P G ED +
Sbjct: 61 QAKGEEKQALLAEVKQLAADVKRLEAEAGEALTIRDAALREIPNLAE-GAPEGLEDDFTV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
R+ VG F+ PVKDH ++ + L D A+VSG++FY+L+ LE+ ++N +
Sbjct: 120 REHVGEVPRFDHPVKDHLEIAEGLRAIDMARGAKVSGARFYFLRGIGAQLELAILNSAID 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ + GFTP+ TP +V +E GF A+ +VY ++ D L+GT+E+ + G H D
Sbjct: 180 QATRAGFTPMITPTLVLPEAMEGTGFLGEHAD-EVYHLDKDDDLYLVGTSEVALAGYHKD 238
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
I+ S PL+YA +S C+R EAG+ G TRG+ RVHQF K+EMF +C+ E+S + HE L
Sbjct: 239 EIIDLSDGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSYCRIEDSYAEHERL 298
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E ++ + + + ++++
Sbjct: 299 LDWEREMMARIDVPYRII 316
>gi|311114299|ref|YP_003985520.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|415713492|ref|ZP_11465196.1| seryl-tRNA synthetase [Gardnerella vaginalis 55152]
gi|310945793|gb|ADP38497.1| serine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|388055751|gb|EIK78638.1| seryl-tRNA synthetase [Gardnerella vaginalis 55152]
Length = 428
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|303231013|ref|ZP_07317756.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302514395|gb|EFL56394.1| serine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 426
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 177/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
+D K++R+N E V N+ NR++ +L+ + Y++ + ++V+ L+ RN+V ++
Sbjct: 2 LDLKFVRENLELVKQNLDNRHTKGDLDTFVAAYDERKQLIQKVEELKALRNSVTEEISQL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K I E K + + + L+ + ++ + L+ +PNM VPVG ED ++
Sbjct: 62 KRNKENADDKIAEMKRVGDEISELDGRIREVEESLRNAELMLPNMCDASVPVGADEDENV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F+F K H+ +G+ LDI DF+ A ++SG++F K LE LIN+ +
Sbjct: 122 EQRKWGEPRQFDFEPKAHWDIGEDLDILDFNRAVKMSGARFTVYKGLGARLERALINFMV 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K+G+T + TP +V + G P+ A +Y +E + LI TAE+ + H
Sbjct: 182 DLHVDKQGYTEMMTPYMVTRETLTGTGQLPKFAE-DMYHVEDTEYFLIPTAEVTLTNYHS 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
ILSE LP Y AF+ CFR EAG+AG TRGL R HQF+K+EM +PE+S + E+
Sbjct: 241 GEILSEDELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLSKPEDSWNELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L L F+++
Sbjct: 301 LTDNAEEVLRLLELPFRVI 319
>gi|429764440|ref|ZP_19296759.1| serine--tRNA ligase [Clostridium celatum DSM 1785]
gi|429188047|gb|EKY28938.1| serine--tRNA ligase [Clostridium celatum DSM 1785]
Length = 425
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 176/326 (53%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNV-----QKEVDRLREERNAVAN 129
+D K++R+N E V NI+N+ + LELV E+ L+V Q+E D LR R ++
Sbjct: 2 LDLKFLRENPEIVKQNIKNKFQDQKLELVDEVI--ALDVESRATQQEADSLRSNRKTISK 59
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQ----CIPNMTHPDVPV 185
++ + +R + E + E L E VK +ELQ++ + IPN+ P VP+
Sbjct: 60 QIGVLMGQGKRDEAEELKAKVNEQAARLAELEVK-ENELQEKIKNIMLVIPNIIDPTVPI 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G P V +F + H ++ + L+ D D A +V+G+ FYYL L+
Sbjct: 119 GKDDSENVEVERFGEPVVPSFEIPYHTEIMEKLNGIDLDGARKVAGNGFYYLMGNIARLQ 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
G++++ +I +GFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 179 SGILSYARDFMINKGFTYCIPPFMIRSEVVTGV-MSFAEMESMMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+IL E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTILKEETLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S + E+L + +L+ SL + + L
Sbjct: 298 SKEWFEKLWKYTVELFRSLDVPVRTL 323
>gi|346314837|ref|ZP_08856354.1| seryl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905775|gb|EGX75512.1| seryl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
Length = 428
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 180/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + +ELV + + ++ ++++ D LR +RNA++ ++
Sbjct: 2 LDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDL-------VKLTDELQQEAQCIPNMTHPDVP 184
G + + L +E +K + + +++ +L +++++ IPN+ HP VP
Sbjct: 62 GGLMA----KGLKDEANAIKAKVQAMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
VG +D + + G P + +F + H + + + D D+A +V+G+ FYYL + L
Sbjct: 118 VGKDDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT + P ++RS+VV +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYVVPPFMIRSNVVTGV-MSFAEMEGMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+IL E LP Y ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES+ + +L DL+ SL + + L
Sbjct: 297 ESEDWFVKLYTNTVDLFRSLDIPVRTL 323
>gi|332798257|ref|YP_004459756.1| seryl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|438001176|ref|YP_007270919.1| Seryl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332695992|gb|AEE90449.1| Seryl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|432177970|emb|CCP24943.1| Seryl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 425
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 178/324 (54%), Gaps = 9/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNA----VANK 130
+D K++R N + V +++NR + A+L+ L+L E+ N+ EV++L+ RN+ +A K
Sbjct: 2 LDVKFVRQNPDIVRRSLQNRRTEADLDRFLKLDEERRNLLFEVEKLKNLRNSESEEIARK 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K K EP++ +LI K + + + ++E + ++ + L++ IPN+ VP+G D
Sbjct: 62 KKAK-EPAD--ELIARMKEVSQQIKEMDEKINEVENSLEEILLTIPNIPDDSVPIGESDA 118
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P+ F+F K H+ +G+ LDI DF+ A +++GS+F K LE LIN
Sbjct: 119 DNVEVRRWGEPTKFDFEPKPHWDIGEDLDILDFERARKITGSRFTVYKGAGARLERALIN 178
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L K + + P IV + G P+ D LI TAE+PV
Sbjct: 179 FMLDLHTQKHNYKEIFPPFIVNRDSMTGTGQLPKFEEDAFKLANNNDYFLIPTAEVPVTN 238
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H D ILS+ LP+ Y A+S CFR EAG+AG TRGL R HQF+K+E+ F + S
Sbjct: 239 LHRDEILSKDDLPIYYVAYSGCFRAEAGSAGRDTRGLIRQHQFNKVELVKFTDAQSSMQE 298
Query: 369 HEELIRIEEDLYSSLGLHFKLLLF 392
E+L E++ LGL +++++
Sbjct: 299 LEKLTADAEEVLKLLGLPYRVVVL 322
>gi|164422793|ref|XP_963172.2| hypothetical protein NCU09594 [Neurospora crassa OR74A]
gi|157069824|gb|EAA33936.2| hypothetical protein NCU09594 [Neurospora crassa OR74A]
Length = 551
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 182/357 (50%), Gaps = 38/357 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANL---ELVLELYEKMLNVQKEVDRLREERNAV- 127
K +D K IR N + + N +RN + + + +L+ + Q+E LRE N +
Sbjct: 71 KPVVDIKHIRQNPDLYAQNCIDRNYHQQASYPQRINDLHAQWQAKQREARSLRERSNILR 130
Query: 128 -------------ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
A+ + + R +LI E + LK L T+E + ++ E++ A
Sbjct: 131 RQLTDPGSIRDENADTIAAGTKFLTRDELIAEARKLKSLLSTIEAEETRILSEIESLALA 190
Query: 175 IPNMTHPDVPVGGED--CSIIRKTVGN-PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
IPN+T + P G E S+I + PS + + H +G L + DF +A SG
Sbjct: 191 IPNLTSEESPRGPEPKLLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGW 250
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+Y+L +EA LE LI + L ++ G+ ++ P +V S + CGFQPR N TQ+Y
Sbjct: 251 GWYFLLDEAAQLEQALIAYALDLAVRSGWRQVSPPSMVYSHIASACGFQPRDQNGETQIY 310
Query: 290 SI-EGADQC--------LIGTAEIPVGGIHMDSIL-----SESLLPLKYAAFSHCFRTEA 335
++ + AD + GT+EIP+ G+H +L PLKY A S C+R EA
Sbjct: 311 ALAQSADDAARGKPELSMAGTSEIPLAGMHASKMLLCPGDISEFSPLKYVAVSRCYRAEA 370
Query: 336 GAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
G+ G T+GLYRVH+F+K+E+F + P + + E++ ++ DL SSLGLH ++L
Sbjct: 371 GSRGLETKGLYRVHEFTKVELFGWTYPSLDSATDVFNEIVDLQTDLLSSLGLHCRVL 427
>gi|376263035|ref|YP_005149755.1| seryl-tRNA synthetase [Clostridium sp. BNL1100]
gi|373947029|gb|AEY67950.1| seryl-tRNA synthetase [Clostridium sp. BNL1100]
Length = 425
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 180/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R+N E V NIRN+ + L LV E L ++ + ++E + LR RN ++ ++
Sbjct: 2 LDLRFVRENPEIVKQNIRNKFQDRKLRLVDEVIALDSELRSAKQEAETLRANRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + +E +++ ++ E L LE +L ++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKAEAEEMKQQVTAQSERLAALEVQENELEEKVKNILMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + L D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQRYGEPVVPDFEIPYHTEIMEKLKGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGVMSFAEMEA--MMYKIEGEDLFLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 240 IGKFIDTIIPETSLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDSM 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+++++ + DL+ SL + + L
Sbjct: 300 MWYDKMWQNTVDLFQSLDIPVRTL 323
>gi|431792078|ref|YP_007218983.1| seryl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782304|gb|AGA67587.1| seryl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 421
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 177/318 (55%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E V ++ RNSN +L+ L E+ + +V+ L+ +RN V+ ++ +
Sbjct: 2 LDLKFVRTNPEVVKEALQKRNSNVSLDEFLNQEEERRKLLFDVETLKAKRNTVSEEVGRR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + ++LI E + + + + +LEE L K+ ++++ IPN+ H VPVG E ++
Sbjct: 62 KKSGEDAEQLILEMREVGQDIKSLEEQLTKIENDMETVLYGIPNIPHASVPVGTDESFNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
++ G P F++ H+++G+ LDI DF A +V+G++F + K LE LI++ L
Sbjct: 122 QVRSWGTPGRFDYQPLAHYEIGENLDILDFARAGKVTGARFTFYKGLGARLERSLISFML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+ + P +V + + G P+ + + G + LI TAE+PV ++ +
Sbjct: 182 DRHTAKGYVEVLPPFMVHRNSMIGTGQLPK-FEEDAFKVAGTEYFLIPTAEVPVTNMYRE 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F P+ S E L
Sbjct: 241 EILEADQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFTLPDNSYEELEAL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
R E + L L ++++
Sbjct: 301 TRDAESILQELELPYRVM 318
>gi|256751428|ref|ZP_05492306.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749647|gb|EEU62673.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 423
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 186/321 (57%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N EAV I + A+++ LEL EK + E++ L+ RN ++ + K
Sbjct: 2 LDVKRIRNNPEAVRIAIELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + LI E K L + + +E+++ ++ +EL++ IPN+ H VP+G ED
Sbjct: 62 KREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ L I DF+AAA V+GS+F + K LE LIN+
Sbjct: 122 EIRRW-GEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F +P++S E
Sbjct: 240 RDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLLL 391
++ R E++ +LGL +++++
Sbjct: 300 KMTRDAEEVLQALGLPYRVVV 320
>gi|383824310|ref|ZP_09979494.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
gi|383337583|gb|EID15959.1| seryl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
Length = 417
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ E V + +R + L +++L D LR E+ A + K+ G
Sbjct: 2 IDLRLLRDDPETVRRSQISRGEDPGLVDVLLAADAARRTAISRADSLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ER L+++ K L E + E I N+ VP GGE+ +
Sbjct: 61 AAAAAERPALLQQAKELAEQVKAAEAVQADAEAAFTAAHMAISNVILDGVPAGGEEDYTV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P+ P +DH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPAGIENP-RDHLELGESLGLIDMARGAKVSGSRFYFLTGRGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF PL P +VR V+ GF GA+ + VY IE D L+GT+E+P+ G H D
Sbjct: 180 LAVDNGFIPLIPPVLVRPQVMSGTGFL--GAHAEEVYRIEADDLYLVGTSEVPLAGYHGD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+Y +S CFR EAG+ G TRG+ RVHQF K+E FV+C P+++++ HE L
Sbjct: 238 EILDLSGGPLRYVGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCVPDDAEAEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + ++ + + + ++++
Sbjct: 298 LGWQREMLARIEVPYRVI 315
>gi|406918119|gb|EKD56755.1| hypothetical protein ACD_58C00103G0004 [uncultured bacterium]
Length = 423
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 186/330 (56%), Gaps = 25/330 (7%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+NK+ V I+N+N N +L +L L ++ ++Q+++++LR ERN +A
Sbjct: 2 LDIKFIRENKKEVEKAIKNKNVNLDLGRLLLLDKEKQDLQQKIEKLRSERNCLA------ 55
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
R ++I+ K +KE L LE ++++EL + +PN+ D P+G E + +
Sbjct: 56 ---KSRTEVIK-AKKVKEFLRDLEPRFTEVSEELLEIMLHVPNIYSDDTPIGKDEKENKV 111
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G F+F +KDH +L K LD+ D + +VSG + YYLKN+AV L++ L+ +TL
Sbjct: 112 IYSWGKLKKFSFKIKDHIELAKDLDLIDLERGTKVSGFRGYYLKNQAVKLQLALMQYTLD 171
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-----------LIGTA 302
++ GFTP+ TP +V + G P A ++Y I + L+GTA
Sbjct: 172 KLSAEGFTPMITPTLVHKMALVGSGHFPE-AKDEIYQIANPGKLSSGEAIKEETYLVGTA 230
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + + +L ES LPLK++ FS C+R+E G+ G +G++R+H+F K+E V C+
Sbjct: 231 EPSLLAYRANEVLDESELPLKFSGFSQCYRSEIGSYGKDLKGVFRIHEFMKVEQVVICKA 290
Query: 363 E--ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+ E++ +L+ I + + L L ++++
Sbjct: 291 DYKEAEKMFSKLLAISQSILKDLELPYQVV 320
>gi|146304700|ref|YP_001192016.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|172046949|sp|A4YI40.1|SYS_METS5 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|145702950|gb|ABP96092.1| seryl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 455
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 26/335 (7%)
Query: 80 IRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPS 138
IR+N +++ ++R RN N L E +EL +K + +EV++LR E N V++++ +L P
Sbjct: 9 IRNNPDSLMESLRKRNVNPQLAEKAVELDKKWRAILQEVEKLRHEHNVVSSQIP-RLSPE 67
Query: 139 ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-------- 190
ER+K IEE +NL + E++L + +E + +PN+ H VPVG +D
Sbjct: 68 ERKKKIEEARNLLSIIEAKEKELKTIEEERDNILRTLPNVVHESVPVGPDDSYNVPIKVW 127
Query: 191 ---SIIRKTVG---------NPS--VFNF-PVKDHFQLGKALDIFDFDAAAEVSGSKFYY 235
+ K V NP + F PV +L L + + A EV+GS+FYY
Sbjct: 128 GKFRVYEKDVNEFLSQVKGLNPDYEIIKFKPVGHADELEAVLKLGNTAKAGEVAGSRFYY 187
Query: 236 LKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGAD 295
L + LE LI + L + +G++ + P ++R V++ +Y IEG D
Sbjct: 188 LFEDVAWLEQALIAYALDVITSKGYSLVIPPYMLRGEVIQSV-IDLDTFKDAIYKIEGED 246
Query: 296 QCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLE 355
LI TAE P+ ++ + LPL+Y S FR EAGAA +G++RVHQF+K+E
Sbjct: 247 LYLIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAANKDLKGIFRVHQFNKVE 306
Query: 356 MFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F+F PE+S +HEEL+ E ++ L L ++++
Sbjct: 307 QFIFSLPEDSWKFHEELLGNAEQIFQGLELPYRVV 341
>gi|423101236|ref|ZP_17088940.1| serine--tRNA ligase [Listeria innocua ATCC 33091]
gi|370792351|gb|EHN60228.1| serine--tRNA ligase [Listeria innocua ATCC 33091]
Length = 436
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 182/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N E V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + IEE + + + + TL+ +L ++ ++L IPN+
Sbjct: 57 LKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDTILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S + E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVL 329
>gi|359765922|ref|ZP_09269741.1| seryl-tRNA synthetase [Gordonia polyisoprenivorans NBRC 16320]
gi|359316558|dbj|GAB22574.1| seryl-tRNA synthetase [Gordonia polyisoprenivorans NBRC 16320]
Length = 418
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V A+ + R +A L + +L+ E D LR E+ A+ ++ G
Sbjct: 2 IDLKIVREDPDRVRASQQARGEDAGLVDQLLDADATRRAAIVEADSLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E V DE Q A + P GGED ++
Sbjct: 61 KASGEEKTALLAKGKELAE-QVKAAVARQNEADERSQAAHIAISNIVEGAPAGGEDDYVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + +L++GL+
Sbjct: 120 LEHVGEPPTIENP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGQGALLQLGLLTMAAQ 178
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF A+ +VY ++ D L+GT+E+P+ G HM+
Sbjct: 179 KATANGFTLMVPPVLVRPEVMGGTGFLGAHAD-EVYHLDKEDDLYLVGTSEVPLAGYHMN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H++L
Sbjct: 238 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 298 LAWEKEMLAAIDVPYRVI 315
>gi|322707735|gb|EFY99313.1| putative mitochondrial serine--tRNA ligase [Metarhizium anisopliae
ARSEF 23]
Length = 515
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 189/384 (49%), Gaps = 45/384 (11%)
Query: 41 FRLLARAFSAPALQTIDTTDNK-GGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNAN 99
+L RA SA DNK +A KP ID K IR N E RN
Sbjct: 13 LKLQTRAVSARTF-----ADNKRPPIAPKP----IIDIKHIRQNPELYELTCLERNYKNQ 63
Query: 100 LEL---VLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPSE-----------RQKLIE 145
+LEL+ + +Q++ LRE N + + S R+++ +
Sbjct: 64 ATYPARILELHSEWQVLQRQGRALRERSNLLRKFLANPATSSGDDDVEDIREMGREQVQD 123
Query: 146 EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNP----- 200
E + LK L +E+ + E++ A IPN+T PD P G E +++ + +P
Sbjct: 124 EARKLKGELAVIEKGEAEAVAEMEALALEIPNLTSPDTPRGDE--AVLLSYINDPPTAFD 181
Query: 201 -SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRG 259
S N + H +G L +FDF AA SG +YYL EA LE L+ + L+ K G
Sbjct: 182 NSPENKVWRSHVHVGSELGLFDFAGAATASGWGWYYLVGEAAQLEQALVQYALAVATKYG 241
Query: 260 FTPLTTPEIVRSSVVEKCGFQPRG--ANTQVYSIEGA---------DQCLIGTAEIPVGG 308
+T ++ P +V S + CGFQPR QVY+I + + CL GT+EI + G
Sbjct: 242 WTQVSPPTMVYSHIGAACGFQPRDQHGEQQVYAIAQSKADADRGVPEMCLAGTSEISLAG 301
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESD 366
+ ++ L LP+K A S C+R EAGA G T+GLYRVH+F+K+EMF + P +E+
Sbjct: 302 MKANTTLDPEDLPMKRVAVSRCYRAEAGARGADTKGLYRVHEFTKVEMFAWTSPGEDEAQ 361
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
EE++ I+ ++ SLGL+ ++L
Sbjct: 362 DVFEEMLDIQTEILQSLGLYCRVL 385
>gi|28881119|emb|CAD70291.1| related to mitochondrial serine--tRNA ligase [Neurospora crassa]
Length = 544
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 182/357 (50%), Gaps = 38/357 (10%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANL---ELVLELYEKMLNVQKEVDRLREERNAV- 127
K +D K IR N + + N +RN + + + +L+ + Q+E LRE N +
Sbjct: 64 KPVVDIKHIRQNPDLYAQNCIDRNYHQQASYPQRINDLHAQWQAKQREARSLRERSNILR 123
Query: 128 -------------ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQC 174
A+ + + R +LI E + LK L T+E + ++ E++ A
Sbjct: 124 RQLTDPGSIRDENADTIAAGTKFLTRDELIAEARKLKSLLSTIEAEETRILSEIESLALA 183
Query: 175 IPNMTHPDVPVGGED--CSIIRKTVGN-PSVFNFPVKDHFQLGKALDIFDFDAAAEVSGS 231
IPN+T + P G E S+I + PS + + H +G L + DF +A SG
Sbjct: 184 IPNLTSEESPRGPEPKLLSLINEHPEPVPSASDRVWRSHVHIGNELGLLDFASAGTTSGW 243
Query: 232 KFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN--TQVY 289
+Y+L +EA LE LI + L ++ G+ ++ P +V S + CGFQPR N TQ+Y
Sbjct: 244 GWYFLLDEAAQLEQALIAYALDLAVRSGWRQVSPPSMVYSHIASACGFQPRDQNGETQIY 303
Query: 290 SI-EGADQC--------LIGTAEIPVGGIHMDSIL-----SESLLPLKYAAFSHCFRTEA 335
++ + AD + GT+EIP+ G+H +L PLKY A S C+R EA
Sbjct: 304 ALAQSADDAARGKPELSMAGTSEIPLAGMHASKMLLCPGDISEFSPLKYVAVSRCYRAEA 363
Query: 336 GAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
G+ G T+GLYRVH+F+K+E+F + P + + E++ ++ DL SSLGLH ++L
Sbjct: 364 GSRGLETKGLYRVHEFTKVELFGWTYPSLDSATDVFNEIVDLQTDLLSSLGLHCRVL 420
>gi|406574679|ref|ZP_11050403.1| seryl-tRNA ligase [Janibacter hoylei PVAS-1]
gi|404555893|gb|EKA61371.1| seryl-tRNA ligase [Janibacter hoylei PVAS-1]
Length = 443
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 174/338 (51%), Gaps = 23/338 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMK- 132
ID K++RD +AV A+ R R + +L + VL E+ + R E+ A + ++
Sbjct: 2 IDLKFLRDQPDAVRASQRARGEDESLVDAVLAADERRREAIGAFESARAEQKAASKELGP 61
Query: 133 --GKLEPSER---------------QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
G+L+ +E+ L ++G L + LE EL + I
Sbjct: 62 LMGRLKKAEKAGEDVTLVAELEAEAAALRDKGAALSARVKELEAAAEAAKGELDTSLRQI 121
Query: 176 PNMTHPDVPVGGEDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSK 232
N+ VP GGE+ + + VG P F F KDH +LG+ L D + A+VSGS+
Sbjct: 122 GNVIQEGVPAGGEEDFDLLEEVGTPRDFAAEGFEPKDHLELGELLGAIDMERGAKVSGSR 181
Query: 233 FYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIE 292
FYYL LE L++ + GFT L P +VR+ + GF + +VY +
Sbjct: 182 FYYLTGIGARLETALMSLAQQIAAEEGFTQLVVPNLVRAETMAGAGFLDAHGD-EVYHLP 240
Query: 293 GADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFS 352
D L GT+E+ + G H D IL PL+YAA S C+R EAG+ G TRG++RVHQF
Sbjct: 241 ADDLYLTGTSEVALAGYHADEILDLRDGPLRYAATSTCYRREAGSYGKDTRGIFRVHQFQ 300
Query: 353 KLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
K EMFVFC+PE++ + H+ L+RIE + +L L ++++
Sbjct: 301 KTEMFVFCRPEDAQAEHDNLLRIERRVLEALELPYRVI 338
>gi|125974866|ref|YP_001038776.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256003878|ref|ZP_05428865.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281418668|ref|ZP_06249687.1| seryl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385777397|ref|YP_005686562.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721167|ref|ZP_14248358.1| Seryl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726563|ref|ZP_14253585.1| Seryl-tRNA synthetase [Clostridium thermocellum YS]
gi|166219869|sp|A3DI04.1|SYS_CLOTH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|125715091|gb|ABN53583.1| seryl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992216|gb|EEU02311.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407752|gb|EFB38011.1| seryl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316939077|gb|ADU73111.1| seryl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380770160|gb|EIC04058.1| Seryl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782867|gb|EIC12474.1| Seryl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 423
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 175/319 (54%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR N E + ++ R N ++ +L L EK E+++LR ++N + + K
Sbjct: 2 LDIKLIRSNPEILKKALQKRKDNFDVNGLLSLDEKRRKTLVELEQLRNKQNENSKLIPKY 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + L+EE K+L E + L+ ++ K+ +EL IPN+ H VP+G D +
Sbjct: 62 KKEGKDVSSLMEEMKSLSEKIKALDAEVRKIDEELNAILLTIPNIPHESVPMGDSDEDNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+++G+ LDI DF AA+V+G++F + K LE L+N+ L
Sbjct: 122 EVRRWGEPRKFDFTPKPHWEIGENLDILDFSKAAKVTGARFTFYKGLGARLERALMNFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K G+ + P +V + + G P+ + + D LI TAE+PV ++
Sbjct: 182 DLHVDKHGYVEVFPPFLVHRNSMIGTGQLPK-FEEDAFKVSDTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL LP+K+ A+S CFR EAGAAG TRGL R HQF+K+E+ F PE S E+
Sbjct: 241 EQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L R E++ L + ++++
Sbjct: 301 LTRDAEEVLQMLEIPYRVV 319
>gi|417556405|ref|ZP_12207464.1| serine--tRNA ligase [Gardnerella vaginalis 315-A]
gi|333602900|gb|EGL14325.1| serine--tRNA ligase [Gardnerella vaginalis 315-A]
Length = 428
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGLSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|415702578|ref|ZP_11458724.1| seryl-tRNA synthetase [Gardnerella vaginalis 284V]
gi|388053124|gb|EIK76115.1| seryl-tRNA synthetase [Gardnerella vaginalis 284V]
Length = 428
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKATLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEYGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSHAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|223983497|ref|ZP_03633683.1| hypothetical protein HOLDEFILI_00964 [Holdemania filiformis DSM
12042]
gi|223964669|gb|EEF68995.1| hypothetical protein HOLDEFILI_00964 [Holdemania filiformis DSM
12042]
Length = 427
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 172/323 (53%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D +R N E V NI+ + N LELV +EL + + + D LR +RNA++ ++
Sbjct: 2 LDINLLRTNPEVVKENIKKKFQNQKLELVDKVVELDRQFRKAKTDGDSLRGQRNAISKQI 61
Query: 132 KGKLEPSERQKLIEEGK---NLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G ++ + K E K N+ + L LE +L E+++ +PN+ VP+G +
Sbjct: 62 GGFMKQGLKDKAEEAKKEVANIAKQLADLEVKEEELAAEIKKIMLVLPNIIDETVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V ++ + H + ++ D D D+A + SG+ FYYLK + L +
Sbjct: 122 DSENVEIEKFGEPVVPDYEIPYHTDIMESFDGIDLDSARKTSGNGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT P ++RS VV N +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYYIPPFMIRSDVVTGVMSFAEMENM-MYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTIIDEEQLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSKH 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDQLWKNSVDFFRSLDIPVRTL 323
>gi|378715930|ref|YP_005280819.1| seryl-tRNA synthetase SerS [Gordonia polyisoprenivorans VH2]
gi|375750633|gb|AFA71453.1| seryl-tRNA synthetase SerS [Gordonia polyisoprenivorans VH2]
Length = 418
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 181/318 (56%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ + V A+ + R +A L + +L+ E D LR E+ A+ ++ G
Sbjct: 2 IDLKIVREDPDRVRASQQARGEDAGLVDQLLDADATRRAAIVEADSLRSEQKALGKQV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ L+ +GK L E V DE Q A + P GGED ++
Sbjct: 61 KASGEEKTALLAKGKELAE-QVKAAVARQNEADERSQAAHIAISNIVEGAPAGGEDDYVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P P KDH +LG++L + D + A+VSGS+FY+L + +L++GL+
Sbjct: 120 LEHVGEPPTIENP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGQGALLQLGLLTMAAQ 178
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC-LIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF A+ +VY ++ D L+GT+E+P+ G HM+
Sbjct: 179 KATANGFTLMVPPVLVRPEVMGGTGFLGAHAD-EVYHLDKDDDLYLVGTSEVPLAGYHMN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P +YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H++L
Sbjct: 238 EILDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCKPEDAEAEHQKL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E+++ +++ + ++++
Sbjct: 298 LAWEKEMLAAIDVPYRVI 315
>gi|289572486|ref|ZP_06452713.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
gi|289536917|gb|EFD41495.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis K85]
Length = 419
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 169/318 (53%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV + +R + L + +L V D LR E+ A A+K G
Sbjct: 2 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGCSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|228989226|ref|ZP_04149220.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995409|ref|ZP_04155080.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|229003023|ref|ZP_04160881.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758223|gb|EEM07410.1| Seryl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228764335|gb|EEM13211.1| Seryl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770501|gb|EEM19071.1| Seryl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 424
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R N E V A +++R + + EL + + + + L+ +RN V+ ++
Sbjct: 2 LDIKFLRANFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQISV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + + LI E + + E + + +L + ++L++ IPN+ H P+G ED +
Sbjct: 62 LKREKKDAEALILEMREVGEKVKDFDNELRIVEEDLERLMLSIPNIPHESAPIGETEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ +T G FNF K H+ L L I DF+ AA+V+GS+F + K LE LI++
Sbjct: 122 VVARTWGEVKEFNFEPKPHWDLATDLGILDFERAAKVTGSRFVFYKGAGARLERALISFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + G+ + P +V + + G P+ + IE D LI TAE+PV +H
Sbjct: 182 LDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP++YAAFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILSSEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + LGL ++++
Sbjct: 301 KLTNDAERVLQLLGLPYRVM 320
>gi|415705666|ref|ZP_11460937.1| seryl-tRNA synthetase [Gardnerella vaginalis 75712]
gi|388052388|gb|EIK75412.1| seryl-tRNA synthetase [Gardnerella vaginalis 75712]
Length = 428
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + + N+ + P GGED ++
Sbjct: 62 A-QDSEKVTLIAQTKELAQKVAEYKAESEQATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSHAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|322700466|gb|EFY92221.1| putative mitochondrial serine-tRNA ligase [Metarhizium acridum CQMa
102]
Length = 515
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 192/383 (50%), Gaps = 43/383 (11%)
Query: 41 FRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANI--RN-RNSN 97
+L RAFSA + + + +A KP ID K IR N E RN RN
Sbjct: 13 LKLQTRAFSARSF----ADNRRPPIAPKP----IIDIKHIRQNPELYELTCLERNYRNQA 64
Query: 98 ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPS-----------ERQKLIEE 146
+LEL+ + +Q++ LRE N + + S R+++ +E
Sbjct: 65 TYPARILELHSEWQVLQRQGRALRERSNLLRKFLANPATSSGDDDVEDIREMSREQVQDE 124
Query: 147 GKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNP------ 200
+ LK L +E+ + E++ A IPN+T D P G E +++ + +P
Sbjct: 125 ARKLKGELAVIEKGEAEAVAEMEALALEIPNLTSHDTPRGDE--AVLLSYINDPPTAFDN 182
Query: 201 SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGF 260
S N + H +G L +FDF AA SG +YYL EA LE L+ + L+ + G+
Sbjct: 183 SPENKVWRSHVHVGSELGLFDFSGAATASGWGWYYLVGEAAQLEQALVQYALAVATRYGW 242
Query: 261 TPLTTPEIVRSSVVEKCGFQPRG--ANTQVYSIEGA---------DQCLIGTAEIPVGGI 309
T ++ P +V S + CGFQPR QVY+I + + CL GT+EI + G+
Sbjct: 243 TQVSPPTMVYSHIGAACGFQPRDQHGEQQVYAIAQSKADADRGVPEMCLAGTSEISLAGM 302
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS-- 367
++ + LP+K A S C+R EAGA G T+GLYRVH+F+K+EMF + P + D+
Sbjct: 303 KANTTIDPEDLPMKRVAVSRCYRAEAGARGADTKGLYRVHEFTKVEMFAWTSPGQDDAQD 362
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+EE++ I+ ++ SLGL+ ++L
Sbjct: 363 VYEEMLDIQTEILQSLGLYCRVL 385
>gi|433632927|ref|YP_007266555.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
gi|432164520|emb|CCK61978.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070010]
Length = 419
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 169/318 (53%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV + +R + L + +L V D LR E+ A+K G
Sbjct: 2 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQK-TASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|148378026|ref|YP_001252567.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153931011|ref|YP_001382425.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153937253|ref|YP_001385977.1| seryl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|166219865|sp|A7FQ53.1|SYS_CLOB1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166219866|sp|A5HXR1.1|SYS_CLOBH RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|148287510|emb|CAL81569.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152927055|gb|ABS32555.1| seryl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152933167|gb|ABS38666.1| serine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 426
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 180/322 (55%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N + ++ NR ++ + VL+L E+ N+ +V+ L+ +RN V++++
Sbjct: 2 LDLKRIRNNSNEIKESLNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSEV 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K K E + ++ E KNL E + + L K+ +++Q IPN+ +P VP G D
Sbjct: 62 PKLKKEGKDVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGDTDE 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
I + P+ F+F K H+ +G L+I DF+ A +V+GS+F + K LE LI+
Sbjct: 122 DNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGARLERSLIS 181
Query: 250 WTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + K G+T + P +V + + G P+ + I D LI TAE+PV
Sbjct: 182 YFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPK-FEEDAFKISEDDYFLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D IL LPLK+ A+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 241 LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L E + LG+ ++++
Sbjct: 301 LEKLTNDAETVLKELGIPYRVV 322
>gi|28572881|ref|NP_789661.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|46577235|sp|Q83HA1.1|SYS_TROW8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|28411014|emb|CAD67399.1| seryl-tRNA synthetase [Tropheryma whipplei TW08/27]
Length = 417
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
Query: 120 LREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
LR E+N ++ K+ G E S+R +L+ L E + E+ K E ++ IPN+
Sbjct: 48 LRAEQNVLSKKIAGS-EDSDRPELMRVANLLAERVKNAREEQEKANSEWKKLLFEIPNIV 106
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
+ P G ED + KTVG+ F+F DH QLG+ LD D +VSG++FY+LK
Sbjct: 107 SSEAPYGVEDKCAVMKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGW 166
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ ++N L +K G T L TP +V+ ++ GF R +VY + L
Sbjct: 167 GARLELAVMNLALDLALKSGLTLLITPTLVKPEIMLGTGFLGRHEG-EVYRLPSG-YYLT 224
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P++YA +S C+R EAG+ G TRG+ RVHQFSKLEMF +
Sbjct: 225 GTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSY 284
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
P++S E ++ ++E + + L + +++ AE
Sbjct: 285 VHPQQSTRELEHIVSMQEKMLNLLEIPYRVSDIAAE 320
>gi|407941836|ref|YP_006857476.1| seryl-tRNA ligase [Campylobacter jejuni subsp. jejuni PT14]
gi|419649484|ref|ZP_14180722.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|380630017|gb|EIB48262.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|407905674|gb|AFU42503.1| seryl-tRNA ligase [Campylobacter jejuni subsp. jejuni PT14]
Length = 411
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSTKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|315657755|ref|ZP_07910635.1| serine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315491552|gb|EFU81163.1| serine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 443
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 171/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNR-NSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + ++DN E + A+ R N A ++ L E+ + R E+ A + ++ G
Sbjct: 16 IDLRAMKDNPEPMRASQLARGNDPATVDQALAADERRRAALTAFETARAEQKAFSKQI-G 74
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
ER L+E+ K L E + LEE + +E ++ A + N+ VP GGED +
Sbjct: 75 SASKEERPALLEQAKKLSENVKALEEASNQAAEEAKKAAMVLENLILDGVPSGGEDDYEV 134
Query: 194 RKTVGNP----SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
G P + F +DH LG LD D D A+VSG++FYYLK LE+ ++N
Sbjct: 135 LSQEGAPIRDFTAEGFTPQDHLDLGIGLDAIDTDRGAKVSGARFYYLKGVGARLELAILN 194
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L I GFTP+ TP +V + GF ++ ++Y + + L GT+E+ + G
Sbjct: 195 AALDTAIAHGFTPMITPCMVSPETMSGTGFLGEHSD-EIYYLPADNLYLTGTSEVALAGY 253
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + I+ S P +Y +S CFR EAG+ G TRG+ RVHQF K+EMF +C+ E++ H
Sbjct: 254 HTNEIIDLSAGPKRYTGWSACFRREAGSYGKDTRGIIRVHQFHKVEMFSYCKLEDAVEEH 313
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E ++ + + L ++++
Sbjct: 314 QKLLNMEREMLAKVELPYRII 334
>gi|424867419|ref|ZP_18291221.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
gi|206602909|gb|EDZ39389.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
gi|387222127|gb|EIJ76598.1| Seryl-tRNA synthetase [Leptospirillum sp. Group II 'C75']
Length = 442
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 183/328 (55%), Gaps = 15/328 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D + I + +A + +R ++ ++ VLE + + +++K + LRE RN ++ ++ +
Sbjct: 2 LDIRRILSDTDACRKALLDRKTDIPIDDVLEEEKDLASLRKRWESLRETRNRLSEEIGRK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS-- 191
K E L+EE +++ + +E+DL+K + L++ +PN+ HP VPVG ++ +
Sbjct: 62 KRVGEETASLMEESRSVNGEIALMEQDLLKREEALRERLLLLPNIPHPSVPVGPDETANK 121
Query: 192 -IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ R+ G+P F F H+++G L I DFD AA +SGS+F L + LE L +W
Sbjct: 122 EVHRQ--GSPREFPFSPLPHWEIGNRLGILDFDRAAVLSGSRFSVLTGDGARLERALTSW 179
Query: 251 -----TLSEVIKRG---FTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
T S V +R +T ++ P +VR ++E G P+ + + I + LI TA
Sbjct: 180 MLDTHTASGVTRRSQKSYTEVSVPLLVRPEMMEGTGQFPK-FREESFQIPEDNLVLIPTA 238
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E+PV ++ DSIL E LP+KY A + CFR EAGAAG TRGL R HQF K+E+ P
Sbjct: 239 EVPVTNLNRDSILEEEDLPVKYVASTTCFRREAGAAGKDTRGLIRQHQFQKVELVWVTSP 298
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+ S EEL R E + + LGL F+ +
Sbjct: 299 DTSYDDLEELTRDAEQILAGLGLPFRRI 326
>gi|28493693|ref|NP_787854.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist]
gi|46577233|sp|Q83FJ7.1|SYS_TROWT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|28476735|gb|AAO44823.1| seryl-tRNA synthetase [Tropheryma whipplei str. Twist]
Length = 417
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 3/276 (1%)
Query: 120 LREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
LR E+N ++ K+ G E S+R +L+ L E + E+ K E ++ IPN+
Sbjct: 48 LRAEQNVLSKKIAGS-EDSDRPELMRVANLLAERVKNAREEQEKANSEWKKLLFEIPNIV 106
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
+ P G ED + KTVG+ F+F DH QLG+ LD D +VSG++FY+LK
Sbjct: 107 SSEAPYGVEDKCAVMKTVGDIPEFDFEPADHLQLGEQLDAIDVSRGVKVSGTRFYFLKGW 166
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
LE+ ++N L +K G T L TP +V+ ++ GF R +VY + L
Sbjct: 167 GARLELAVMNLALDLALKSGLTLLITPTLVKPEIMLGTGFLGRHEG-EVYRLPSG-YYLT 224
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E+ + G H D IL S P++YA +S C+R EAG+ G TRG+ RVHQFSKLEMF +
Sbjct: 225 GTSEVAIAGYHSDEILDISSGPIRYAGWSSCYRREAGSHGRDTRGIMRVHQFSKLEMFSY 284
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
P++S E ++ ++E + + L + +++ AE
Sbjct: 285 VHPQQSTRELEHIVSMQEKMLNLLEIPYRVSDIAAE 320
>gi|269837655|ref|YP_003319883.1| seryl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786918|gb|ACZ39061.1| seryl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 427
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID + IR+ + V + N+ A ++ +LEL E+ + EV+ L+ RNA +K +
Sbjct: 2 IDLRLIREQPDLVREALAKLNTEAPIDEILELDERRRALLAEVEELKARRNA-GSKEISR 60
Query: 135 LEPS-ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
L P ER I E + L + + L+ + + L+ +PN+ PDVPVG E ++
Sbjct: 61 LAPGPERDARIAEMRGLGDKIQELDAQVAETDAALRDLLLQVPNLPDPDVPVGPDESANV 120
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ + G P F +PV+ H+++G+ L + DF+ +VSGS+FY+ + + L+ L W +
Sbjct: 121 VVRHWGEPRDFPYPVRPHWEIGEELGLIDFERGVKVSGSRFYFFRGDMARLQRALATWMI 180
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V + G+T L P +VR + G P+ + +Y + +D LI TAE+PV ++
Sbjct: 181 DLHVREHGYTELYAPVLVRPDALIGTGNLPKFGDA-LYRDDESDLWLIPTAEVPVTNLYA 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D IL LP+ + A + CFR E +AG RG+ RVHQF K+EM F PE SD
Sbjct: 240 DEILDADALPIYHVAQTPCFRREQLSAGRDVRGIKRVHQFEKVEMVKFVAPETSDDELNS 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E++ L + ++++
Sbjct: 300 LVANAEEVLQRLNIPYRVV 318
>gi|399889590|ref|ZP_10775467.1| seryl-tRNA ligase [Clostridium arbusti SL206]
Length = 426
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 181/323 (56%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR N + + + NR + N++ V+EL EK + EV+ L+ +RN + ++
Sbjct: 2 LDLKRIRTNPDEIKRLLTNRGEDFDLGNIDKVVELDEKRRKILVEVENLKNKRNKESAEI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GE 188
K K ++ + K L E + +L+ ++VK+ +E++ IPN+ H VP G E
Sbjct: 62 AKLKRAGENADNIMADMKKLSEEVKSLDAEVVKVDEEIEYIMMRIPNIPHDSVPEGKSDE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D IRK G P F+F K H+ +GK L+I DF+ A +V+GS+F + K LE +I
Sbjct: 122 DNVEIRKW-GEPRKFDFESKAHWDIGKDLNILDFERAGKVTGSRFTFYKGLGARLERSII 180
Query: 249 NWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
++ L + V K G+T + P +V + G P+ + +E LI TAE+PV
Sbjct: 181 SYFLDTHVEKHGYTEILPPYMVNRDSMTGTGQLPK-FEEDAFKVENNGFFLIPTAEVPVT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ D +L LP+K+AA+S CFR+EAG+AG TRGL R HQF+K+E+ F +PEES
Sbjct: 240 NLFRDEVLKGEDLPIKFAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFAKPEESYR 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++L E++ LGL ++++
Sbjct: 300 ELDKLTADAEEVLQLLGLPYRVV 322
>gi|51245616|ref|YP_065500.1| seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|67461743|sp|Q6AMD2.1|SYS_DESPS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50876653|emb|CAG36493.1| probable seryl-tRNA synthetase [Desulfotalea psychrophila LSv54]
Length = 425
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 177/324 (54%), Gaps = 9/324 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
++ ++IR+N + V R S+ + E+ +K L+ EV+ L+ +RN + ++
Sbjct: 2 LELRFIRENLDLVQERCNRRGMSDELITSFTEIDQKRLSTLAEVESLKNKRNVASKEIAE 61
Query: 134 KLEPSERQKL-----IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
++ QKL I E + + + + L+ L ++ ++L + IPN+ DVPVG
Sbjct: 62 LKRGTDEQKLEAEPLILEMRQIGDKIKILDTSLNQIQEDLDKVVMAIPNLCQDDVPVGNS 121
Query: 189 DCSIIRKTV-GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D I V G F F K H++LG+ D DF+ AA++SG++F LK A L+ L
Sbjct: 122 DEENIELRVWGKKPEFTFTPKAHYELGEEADTIDFERAAKISGARFAILKGFASRLDRAL 181
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
N+ L K G+T + P +V S+ + G P+ +++I+ D LI TAE+PV
Sbjct: 182 TNFMLDLHTQKHGYTEVLPPFLVNSASLTATGQLPK-FKEDLFAIKDWDLYLIPTAEVPV 240
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
IH D ++E LP+KY AF+ CFR+EAG+ G TRGL R HQF+K+E+ F PE S
Sbjct: 241 TNIHRDETIAEQDLPIKYTAFTPCFRSEAGSHGRDTRGLVRQHQFNKVELVKFTTPERST 300
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
E L+ E++ LGLH++++
Sbjct: 301 DELESLLGDAEEVLQLLGLHYRVV 324
>gi|297543541|ref|YP_003675843.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841316|gb|ADH59832.1| seryl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 423
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 180/319 (56%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
ID K IR N EA+ I + A+++ L+L E+ + E++ L+ RN ++ + K
Sbjct: 2 IDVKRIRGNPEAIKRAIELKKDKADIDKFLKLDERRRQMLVELEALKNRRNVESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E + LI E K L + +E+++ ++ ++L+ IPN+ H VP+G D +
Sbjct: 62 KREGKDVSDLIAEMKELSSKIKEMEQEVKEVEEQLEGILWTIPNIPHESVPIGDSDEDNV 121
Query: 194 R-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+++G+ LDI DF+AAA V+GS+F + K LE LIN+ L
Sbjct: 122 EVRRWGEPRKFDFEPKSHWEIGEELDILDFEAAARVTGSRFTFYKGLGARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
V K G+T + P IV + G P+ + + G D LI TAE+PV ++
Sbjct: 182 DLHVEKHGYTEVFPPFIVHRRSMLGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F +P++S E+
Sbjct: 241 DTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+ + E++ LGL ++++
Sbjct: 301 MTKDAEEVLQLLGLPYRVV 319
>gi|404482814|ref|ZP_11018039.1| serine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404343904|gb|EJZ70263.1| serine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 427
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 179/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ + L +V +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDIVRQNIKNKFQDFKLPMVDEVIELDEKLRKTKAEADELRSKRNKISKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLV-------KLTDELQQEAQCIPNMTHPDVP 184
+ ++ EE + +K + ++ E L +L +++++ IPN+ P VP
Sbjct: 62 GALMAQGKK----EEAEQVKASVASIGETLAGLEPLEAELEEKVKKIMMTIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V F + H + + L+ D D+A +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEIEKFGEPFVPEFEIPYHTDIMEKLNGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I+RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIERGFTYCVPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTLNDEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES ++E+L + DL+ SL + + L
Sbjct: 297 ESKMWYEKLWQNTVDLFRSLDVPVRTL 323
>gi|304437508|ref|ZP_07397466.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369558|gb|EFM23225.1| serine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 423
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N AV +++R + +L EL E+ + ++V+ + RNAV+ ++ +
Sbjct: 2 LDMKFVRENLPAVQEMLKHRCNTLDLSPFTELEERRRRILQDVEEKKARRNAVSKEVGAR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ E +++ E + L + + L+EDL + L+ IPNM DVP+G ++
Sbjct: 62 KKAGENADEIVAEMRTLGDEIAALDEDLRDVELRLRGLLLQIPNMPRADVPIGKDETENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+R+ G P F+F K H+ +G AL I D + AA+V+G++F + K LE IN+
Sbjct: 122 EVRR-CGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFTFYKGLGARLERACINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+T + P IV + + G P+ A ++ +EG D L+ TAE+P H
Sbjct: 181 MDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPTTNYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S E
Sbjct: 240 RDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ ED+ L L ++++
Sbjct: 300 SMVTAAEDVLKILELPYRVI 319
>gi|402311797|ref|ZP_10830728.1| serine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400370944|gb|EJP23923.1| serine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 427
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 179/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ + L +V +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDIVRQNIKNKFQDFKLPMVDEVIELDEKLRKTKAEADELRSKRNKISKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLV-------KLTDELQQEAQCIPNMTHPDVP 184
+ ++ EE + +K + ++ E L +L +++++ IPN+ P VP
Sbjct: 62 GALMAQGKK----EEAEQIKASVASIGETLAGLEPLEAELEEKVKKIMMTIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V F + H + + L+ D D+A +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEIEKFGEPFVPEFEIPYHTDIMEKLNGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I+RGFT P ++RS VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIERGFTYCIPPFMIRSEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTLNDEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES ++E+L + DL+ SL + + L
Sbjct: 297 ESKMWYEKLWQNTVDLFRSLDVPVRTL 323
>gi|62185467|ref|YP_220252.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3]
gi|81312384|sp|Q5L4Z0.1|SYS_CHLAB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|62148534|emb|CAH64305.1| seryl-tRNA synthetase [Chlamydophila abortus S26/3]
Length = 424
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ +L+ +L+L +++ +++ E + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECETRLRKKDPLISLQPILDLDKEIRHLKTETEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + +++ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDVSSMMDNVERISQDLAKLEPLLEQKESTLQDMLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHEILFGSGQIPK-FDGQYYRVEDGEQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D +E
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLAVVEDILTELQLPYRLSLL 322
>gi|257066090|ref|YP_003152346.1| seryl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
gi|256797970|gb|ACV28625.1| seryl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
Length = 429
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 172/325 (52%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K +R+N E V NI+ + + L LV LEL EK+ + + E D LR ERN + ++
Sbjct: 2 IDIKLLRENPELVKENIKKKFQDEKLVLVDEVLELDEKLRSFKTEGDNLRSERNKTSKEI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK + +E K + K + + L +E + E+++ Q IP + VP+G
Sbjct: 62 GALMGQGKKDEAEEAKA--QVKEINDKLTDIEAKTEEYGKEVKKRMQVIPQIIDDSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P V ++ + H + + D D DAA + SG+ FYYL+ + L
Sbjct: 120 KDDTENVEIEKFGEPVVPDYEIPYHIDIMETFDGVDLDAARDTSGAGFYYLRGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
++++ +I RG+T P ++RS VV +Y IEG D LIGT+E
Sbjct: 180 AILSYARDFMIDRGYTYYIPPFMIRSDVVTGV-MSFSEMEDMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +++I E +PL+ ++S CFR E GA G RG+YR+HQF K EM + C+PE+S
Sbjct: 239 MIGKFINTINEEEKMPLRMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDS 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ + EL + D + SL + + L
Sbjct: 299 KTLYNELWKNTVDFFRSLEIPVRTL 323
>gi|269958011|ref|YP_003327800.1| seryl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269306692|gb|ACZ32242.1| seryl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 424
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 173/320 (54%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RDN + V + R + A ++ L+ + + LR E+ A+ K+
Sbjct: 2 IDLRLLRDNPDVVRESQVARGDDPALVDAALDADARRRASLAAFEELRAEQKAMGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ ++L + + + +D L I N+ P GGED ++
Sbjct: 61 QAQGDEKQALLARTRHLSDEVKSRSKDADDAAAALDAALWKISNVVE-GAPAGGEDDYVV 119
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+ VG P F F +DH LG+ L D A+VSG++FY+L LE+ ++N
Sbjct: 120 IQHVGTPRDFAAEGFEPQDHLALGEGLRAIDTARGAKVSGTRFYFLTGIGARLELAILNA 179
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + ++ GFTP+ TP +V+ + GF A+ +VY +E D L+GT+E+ + G H
Sbjct: 180 AMDQAVQAGFTPVITPTLVKPETMRGTGFLGAHAD-EVYRLEKDDLYLVGTSEVALAGYH 238
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ + P +YA +S C+R EAG+AG TRG+ RVHQF K+EMF +C+PE++ H+
Sbjct: 239 ADEIIDLADGPARYAGWSACYRREAGSAGRDTRGIIRVHQFHKVEMFSYCRPEDAAEEHQ 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE + + + L ++++
Sbjct: 299 RLLAWEEAMLAKVELPYRVI 318
>gi|309774995|ref|ZP_07670011.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
gi|308917249|gb|EFP62973.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
Length = 428
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 181/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + +ELV + + ++ ++++ D LR +RNA++ ++
Sbjct: 2 LDMKFLRENPELVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDL-------VKLTDELQQEAQCIPNMTHPDVP 184
G + + L +E +K + + +++ +L +++++ IPN+ H VP
Sbjct: 62 GGLMA----KGLKDEANAIKAKVQAMADEMKETEIKESELAEKIKEMMMQIPNIIHATVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P+V +F + H ++ ++ D D D+A +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVELQKYGEPAVPDFEIPYHTEIMESFDGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT + P ++RS+VV +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYVVPPFMIRSNVVTGV-MSFAEMEGMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+IL E LP Y ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + +L DL+ SL + + L
Sbjct: 297 ESAEWFVKLYTNTVDLFRSLDIPVRTL 323
>gi|300853245|ref|YP_003778229.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300433360|gb|ADK13127.1| seryl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 426
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 174/325 (53%), Gaps = 13/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERN---AVA 128
+D K IR+N E V + NR + A ++ V+ L EK + EV+ L+ +RN A
Sbjct: 2 LDLKRIRNNPEEVKKQLSNRGEDFDPATIDEVIALDEKRRKILVEVEALKNKRNQDSAQI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-- 186
KMK E ++ L+ E K++ + + + +L +L +++ IPN+ +P VP G
Sbjct: 62 AKMKRNGENAD--DLVAEMKHVSDNIKQYDTELSELNGKIEYIMLRIPNIPNPAVPEGKS 119
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
ED IRK P+ F+F K H+ +G LDI DF+ +VSGS+F + K LE
Sbjct: 120 DEDNVEIRKW-SEPTKFDFKPKAHWDIGTDLDILDFERGGKVSGSRFTFYKGLGAKLERA 178
Query: 247 LINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I + L K G+T + P +V + + G P+ + I D LI TAE+P
Sbjct: 179 IITYYLDFHTEKHGYTEILPPYMVNRTSMTGTGQLPK-FEEDAFRISNNDYFLIPTAEVP 237
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
V H D +L LPLKY A+S CFR EAG+AG TRG+ R HQF+K+EM F +PEES
Sbjct: 238 VTNFHRDEVLKGENLPLKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVEMVKFTKPEES 297
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
E+L ED+ L + ++++
Sbjct: 298 YDELEKLTNDAEDVLKGLKIPYRVV 322
>gi|283955812|ref|ZP_06373303.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792767|gb|EFC31545.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 411
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATTEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKEVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|419642785|ref|ZP_14174563.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|419681186|ref|ZP_14210031.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 140-16]
gi|419683466|ref|ZP_14212162.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1213]
gi|380623859|gb|EIB42540.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380658573|gb|EIB74579.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1213]
gi|380658844|gb|EIB74840.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 140-16]
Length = 411
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSTKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|50954101|ref|YP_061389.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81826708|sp|Q6AH61.1|SYS_LEIXX RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|50950583|gb|AAT88284.1| seryl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 421
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 154/273 (56%), Gaps = 3/273 (1%)
Query: 118 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
+ LR E+NA ++ + E+++L+ + + L + ++ + + I N
Sbjct: 46 EELRAEQNAFGKRV-AQAPKQEKKELVAQAQQLAGRVKEAQQVAAAAEARFESVLRKIGN 104
Query: 178 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
VP GGED + K VG F F +DH LG+ L D A+VSG++F +L+
Sbjct: 105 PVVAGVPSGGEDDYAVLKEVGGIPAFGFEPRDHLALGELLGAIDMARGAKVSGARFSFLR 164
Query: 238 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 297
LE+ L+N L + + GF PL TP +V+ V++ GF ++ +VY +E D
Sbjct: 165 GLGARLEIALMNLALDKALANGFVPLITPTLVKPEVMQGTGFLGEHSD-EVYHLETDDLY 223
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L GT+E+ + G H D IL + PL+YA +S C+R EAG+AG TRG+ RVHQF+KLEMF
Sbjct: 224 LTGTSEVALAGYHADEIL-DVTEPLRYAGWSTCYRREAGSAGKDTRGIIRVHQFTKLEMF 282
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V+ PE +++ H L+ +E++ +LGL ++++
Sbjct: 283 VYTLPEHAEAEHARLLAWQEEMMQALGLSYRVI 315
>gi|332654801|ref|ZP_08420543.1| serine--tRNA ligase [Ruminococcaceae bacterium D16]
gi|332516144|gb|EGJ45752.1| serine--tRNA ligase [Ruminococcaceae bacterium D16]
Length = 433
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 178/331 (53%), Gaps = 19/331 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK-----EVDRLREERNAVAN 129
+D K++R+N + V NI+ + + L LV E+ E L+ Q E LR +RNA++
Sbjct: 2 LDIKFVRENPDVVKENIKKKFQDQKLPLVDEVLE--LDSQNRAAIAEAQELRTQRNALSK 59
Query: 130 KM-----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI----PNMTH 180
++ + K +PS+ Q+ E +K L E L L EL Q+ + I PN+
Sbjct: 60 QVGILMGQAKKDPSKLQEAEEAKAKVKANADRLAE-LEALETELAQKIRHIMLQIPNIID 118
Query: 181 PDVPVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
P VP+G +D + + + G P +F + H Q+ ++ + D DAA VSG+ FYYL +
Sbjct: 119 PSVPIGPDDSANVEVQRFGEPVTPDFDIPYHTQIMESFNGIDMDAAGRVSGNGFYYLMGD 178
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLI 299
L G++ + +I +GFT P ++ +VVE Q + +Y IEG D LI
Sbjct: 179 IARLHEGVLAYARDFMIDKGFTFCIPPFMIHGNVVEGVMSQTE-MDAMMYKIEGEDLYLI 237
Query: 300 GTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVF 359
GT+E + G +D IL+E LP ++S CFR E GA G RG+YR+HQF K EM V
Sbjct: 238 GTSEHSMIGKFIDQILTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVV 297
Query: 360 CQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
C+PE+S ++E++ R +L+ SL + + L
Sbjct: 298 CKPEDSMDWYEKMWRYSVELFRSLDIPVRQL 328
>gi|291458613|ref|ZP_06598003.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419146|gb|EFE92865.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 436
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R++ E V NI+ + L LV + L + +Q+E D LR +N V+ ++
Sbjct: 2 LDIRFVREHPELVKENIQKKFQEEKLLLVDEVIRLDAEARKIQQEADELRARKNQVSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
GK E +E+ + E + L LE + KL DE+ + IPNM P VP+G
Sbjct: 62 GALMAAGKKEEAEKAR--AEVADFSGRLSELEAEEPKLQDEIHKRMMVIPNMIDPSVPIG 119
Query: 187 GEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D ++ + G P V +F + H + ++ D DAA V+G+ FYYL + L
Sbjct: 120 RDDSFNVENERFGEPVVPDFEIPYHSDIMQSFGGIDLDAAGRVAGNGFYYLIGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
++++ +I RGFT + P ++RS VV+ + +Y IEG D LIGT+E
Sbjct: 180 AILSYARDFMIDRGFTYVIPPYMIRSRVVDGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D IL LPL +++S CFR E GA G RG+YR+HQF K EM V C+PE++
Sbjct: 239 MIGRFIDEILPADKLPLTLSSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCEPEDA 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++ +L + D + SL + + L
Sbjct: 299 MLWYGKLWKNTVDFFRSLEIPVRTL 323
>gi|331002452|ref|ZP_08325970.1| seryl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330410268|gb|EGG89702.1| seryl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 426
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 178/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ + L +V +EL EK+ + E D LR +RN ++ ++
Sbjct: 2 IDIKFLRENPDIVRQNIKNKFQDFKLPMVDEVIELDEKLRKTKAEADELRSKRNKISKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLV-------KLTDELQQEAQCIPNMTHPDVP 184
+ +R EE + +K + ++ E L +L +++++ IPN+ P VP
Sbjct: 62 GALMAQGKR----EEAEQVKASVASIGETLAGLEPLEAELEEKVKKIMMTIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V F + H + + L D D+A +V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEIEKFGEPFVPEFEIPYHTDIMEKLSGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I+RGFT P ++R+ VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIERGFTYCVPPFMIRAEVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTLNEEAKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES ++E+L + DL+ SL + + L
Sbjct: 297 ESKMWYEKLWQNTVDLFRSLDVPVRTL 323
>gi|335997603|ref|ZP_08563516.1| seryl-tRNA synthetase [Lactobacillus ruminis SPM0211]
gi|335349485|gb|EGM50984.1| seryl-tRNA synthetase [Lactobacillus ruminis SPM0211]
Length = 424
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 175/319 (54%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKM-K 132
+D K IR N + + + R A ++ +LE ++ + E + L+++RN V+ ++
Sbjct: 2 LDIKMIRQNTDEIKERLATRGVKAEKIDALLEKDKRRRELLVETEGLKQKRNEVSAEIAN 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K + I+E + + + +L+E+L ++ ++ A +PN+ +P +PVG E +
Sbjct: 62 AKRNKQDATDAIKEMREVGAKIKSLDEELEEVEATVKDMASRLPNLPNPTIPVGPDESAN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + VG P F+F K H+ +G+ L I DFD A+VSG++F Y K LE + N+
Sbjct: 122 VELRKVGTPREFDFEPKAHWDIGEDLGILDFDRGAKVSGARFVYYKGLGARLERAVYNFM 181
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L E K G+T + P IV + + G P+ VY + G D LI TAE+P+ +
Sbjct: 182 LDEHAKEGYTEMLPPYIVNAQTMYGTGQFPK-FKEDVYQVNGEDMTLIPTAEVPLTNYYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D ++ LP+ + A + CFR+EAG+AG TRGL R+HQF+K+EM F +PE S E+
Sbjct: 241 DEVIPMEKLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKFSKPENSYDELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+ + ++ LGL + ++
Sbjct: 301 MTQNAGNIMEKLGLPYHVI 319
>gi|94268694|ref|ZP_01291257.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
gi|93451499|gb|EAT02326.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
Length = 424
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 176/322 (54%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
++ ++IR+N V RN + L+ EL + + E++ R R V+ +
Sbjct: 2 LELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIGA 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K + + + + +EE + L E L LEE L + +L++ IPN+ VPVGG++
Sbjct: 62 LKKEGDEAAASRRMEETRQLGERLKELEEQLAGVDGQLEEIVMAIPNLCEDSVPVGGDEA 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+FP K H++LG+A DF AA+++GS+F L A LE LI+
Sbjct: 122 DNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALIS 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L K G+T + P +V S+ + G P+ A ++ IEGAD LI TAE+PV
Sbjct: 182 FMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAE-DLFRIEGADLWLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH D L+E LP+ Y A++ CFR+EAG+ G T+GL R HQF K+E+ F PE SD+
Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L+ E + L L +++
Sbjct: 301 LEKLLSDAEKVLQLLELPHRVV 322
>gi|326390337|ref|ZP_08211896.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325993614|gb|EGD52047.1| seryl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 423
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N EAV + + A+++ LEL EK + E++ L+ RN ++ + K
Sbjct: 2 LDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + LI E K L + + +E+++ ++ +EL++ IPN+ H VP+G ED
Sbjct: 62 KREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ L I DF+AAA V+GS+F + K LE LIN+
Sbjct: 122 EIRRW-GEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F +P++S E
Sbjct: 240 RDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ R E++ +LGL ++++
Sbjct: 300 KMTRDAEEVLQALGLPYRVV 319
>gi|86151194|ref|ZP_01069409.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315123949|ref|YP_004065953.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841541|gb|EAQ58788.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315017671|gb|ADT65764.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 411
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|367467271|ref|ZP_09467216.1| Seryl-tRNA synthetase [Patulibacter sp. I11]
gi|365817654|gb|EHN12607.1| Seryl-tRNA synthetase [Patulibacter sp. I11]
Length = 440
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 180/342 (52%), Gaps = 33/342 (9%)
Query: 75 IDFKWIR-DNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
+D K +R D A +A R S+A + VL L E+ + +++ LR E+NA A++
Sbjct: 2 LDLKALRRDPDAARAALARRGGSDAETFDRVLVLDERRREILPQLEGLRAEQNA-ASQAI 60
Query: 133 GKLEPSERQKLIEEG------------KNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTH 180
GK + + + G +++ L+E+L + +LQ+ +PN+ H
Sbjct: 61 GKAQKARKANPPAPGSQADADAAIAAMRDVAARAKALQEELTTVEAQLQESQARLPNLPH 120
Query: 181 PDVPVGGEDCSIIRKTVGNPSVFNFPVK------------DHFQLGKALDIFDFDAAAEV 228
PD P D I +TVG P+V ++ DH Q+ D D + A +
Sbjct: 121 PDAPP--RDTVI--RTVGEPAVDGLDLRANAEGEASSAALDHLQIAGP-DRVDMERGARL 175
Query: 229 SGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV 288
SGS+F YL+ + V LE+ L+ W LS++ G + P +VR + GF P Q+
Sbjct: 176 SGSRFAYLRGDLVFLELALVQWALSKLRGHGHEAVVPPVLVREEALYGTGFLP-DTEQQI 234
Query: 289 YSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRV 348
Y++ + L+GT+E+ + +H IL LP +YA FS CFR EAGAAG+A RG++RV
Sbjct: 235 YTLPDDELFLVGTSEVALASMHAGEILEGDSLPRRYAGFSPCFRREAGAAGSADRGIFRV 294
Query: 349 HQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
HQF K+EMF F PE+++ H L+ IEE++ LG+ ++++
Sbjct: 295 HQFDKVEMFSFVPPEQAEDEHARLLAIEEEILGDLGIPYRVV 336
>gi|134297896|ref|YP_001111392.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|172044203|sp|A4J0G4.1|SYS_DESRM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|134050596|gb|ABO48567.1| seryl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 424
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN---KM 131
+D K++R N E V ++ R S+ +L+ L+L ++L+ RN V+ K+
Sbjct: 2 LDIKFVRSNPELVLEGLKKRGSDISLDEFLKLDSMRREKLVVAEQLKNTRNVVSQEIGKL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDC 190
K + +E + L E + + + + +++++ + ++LQ+ IPN+ H VPVG E+
Sbjct: 62 KKAGQDAEEKTL--EMRKVSQKIKDMDDEIRNIEEKLQEILLSIPNIPHESVPVGKDEND 119
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ + G P F F K H+ LG+ L+I DF+ +V+G++F + K LE LIN+
Sbjct: 120 NVEIRRWGKPRGFEFEPKPHWDLGEDLNILDFERGGKVTGARFSFYKGMGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L + G+T + P IV + G P+ A ++ +EG + LI TAE+PV +
Sbjct: 180 MLDLHTREHGYTEIFPPFIVNGDSMLGTGQLPKFAE-DMFKLEGLNYYLIPTAEVPVTNL 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ D IL+E LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F +PEES
Sbjct: 239 YRDEILAEEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFSKPEESFDEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLLLF 392
E L E + +LGL ++++L
Sbjct: 299 ERLTANAEKILQALGLPYRVVLL 321
>gi|296131015|ref|YP_003638265.1| seryl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
gi|296022830|gb|ADG76066.1| seryl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
Length = 426
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 177/323 (54%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R + + V A+ R + +L + VL+ + + + LR E+ ++ ++
Sbjct: 2 IDLQLLRQDPDVVRASQVARGEDPHLVDEVLDADARRRSALTGYETLRAEQKSLGKQV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ E+Q L+ K+L + L+ D + + A+ I N+ VP GGED ++
Sbjct: 61 QASGDEKQALLAHTKDLAARVKALQADADAAAERATELARRIGNVIEEGVPSGGEDDYVV 120
Query: 194 RKTVGNPSVF------NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ VG P +F VKDH LG+ L D + A+VSGS+FY+L LE+ L
Sbjct: 121 LEHVGTPRDLAAEYGPDFVVKDHLDLGEGLRAIDTERGAKVSGSRFYFLTGVGARLELAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+N + + GF P TP +V+ V+ GF A+ ++Y +E D L+GT+E+ +
Sbjct: 181 LNAAMDLATRHGFVPTITPTLVKPEVMAGTGFLGAHAD-EIYRLEADDLYLVGTSEVALA 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G H + I+ + PL+YA +S C+R EAG+ G TRG+ RVHQF K+E FV+ +PE++ +
Sbjct: 240 GYHANEIVDLTGGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEAFVWTRPEDAAA 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
H ++ +E+++ + + L ++++
Sbjct: 300 EHRRILDLEKEMLALVDLPYRVI 322
>gi|291518415|emb|CBK73636.1| seryl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
Length = 429
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 179/325 (55%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N +AV NI+ + L LV +EL +K Q++ D +R E N A+K
Sbjct: 2 IDIKFLRENPDAVKENIKKKFQEHKLGLVDEVIELDDKRRATQQQADDMRAEMNK-ASKQ 60
Query: 132 KGKL----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
G L + E + E LK+ + LE +L D++++ IPN+ P VP+G
Sbjct: 61 IGALMAQGKKEEAEAAKAEVAELKQKIKDLEPVEKELADKVEEIMMKIPNIIDPSVPIGP 120
Query: 188 ED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+D C++ + G P V +F + H + + + D DAA +V+G+ FYYL + L
Sbjct: 121 DDSCNVEIEKFGEPVVPDFEIPYHTDIMERFNGIDLDAAGKVAGNGFYYLMGDIARLHSA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS+VV F+ A +Y IEG D LIGT+E
Sbjct: 181 VISYARDFMIDRGFTYCIPPFMIRSNVVTGVMSFEEMDA--MMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D++ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 239 MIGKFIDTLNDEANLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDS 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
Y+++L + DL+ SL + + L
Sbjct: 299 KMYYDKLWQNTVDLFRSLDIPVRTL 323
>gi|238928176|ref|ZP_04659936.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531]
gi|238884136|gb|EEQ47774.1| serine--tRNA ligase [Selenomonas flueggei ATCC 43531]
Length = 423
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N AV +++R + +L EL E + ++V+ + RNAV+ ++ +
Sbjct: 2 LDMKFVRENLPAVQEMLKHRCNTLDLSPFTELEEHRRRILQDVEEKKARRNAVSKEVGAR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ E ++I E + L + + L+EDL + L++ +PNM DVP+G ++
Sbjct: 62 RKAGENADEIIAEMRTLGDEIAALDEDLRDVELRLRELLLQVPNMPKADVPIGRDETENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+R+ G P F+F K H+ +G AL I D + AA+V+G++F + K LE IN+
Sbjct: 122 EVRR-CGTPRTFDFTPKAHWDIGDALGILDAERAAKVTGARFTFYKGLGARLERACINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+T + P IV + + G P+ A ++ +EG D L+ TAE+P H
Sbjct: 181 MDLHAEKHGYTEMLAPYIVNEASMIGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPTTNYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S E
Sbjct: 240 RDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ ED+ L L ++++
Sbjct: 300 SMVAAAEDVLKILELPYRVI 319
>gi|167759564|ref|ZP_02431691.1| hypothetical protein CLOSCI_01921 [Clostridium scindens ATCC 35704]
gi|336421471|ref|ZP_08601629.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
gi|167662791|gb|EDS06921.1| serine--tRNA ligase [Clostridium scindens ATCC 35704]
gi|336000750|gb|EGN30897.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 428
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 181/326 (55%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R N + V NI+ + + L LV LEL ++ ++++EV+ LR +RN ++ ++
Sbjct: 2 LDIKFVRMNPDVVKENIKKKFQDEKLPLVDEVLELDKRNRDIKQEVEALRADRNKISKEI 61
Query: 132 KG------KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
K E E +K ++E + E L T E+D+ ++++ IPN+ P VP+
Sbjct: 62 GACMAQGKKDEAEELKKKVQENADRLESLSTEEKDV---EAKIKKIMMTIPNIIDPSVPI 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G P V +F + H ++ ++ D ++A V+G+ FYYL + L
Sbjct: 119 GKDDNENVEIEKFGEPVVPDFEIPYHTEIMESFSGIDLESAGRVAGNGFYYLMGDIARLH 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
++++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 179 SAVLSYARDFMIGRGFTYCIPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D++L+E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTMLTEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S ++++L + DL+ S+ + + L
Sbjct: 298 SKMWYDKLWQNTVDLFRSMDIPVRTL 323
>gi|424825510|ref|ZP_18250497.1| seryl-tRNA synthetase [Chlamydophila abortus LLG]
gi|333410609|gb|EGK69596.1| seryl-tRNA synthetase [Chlamydophila abortus LLG]
Length = 426
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ +L+ +L+L +++ +++ E + L+ +R ++N++ K
Sbjct: 2 LDIKLIRKAPEECETRLRKKDPLISLQPILDLDKEVRHLKTETEALQSQRKLLSNQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + + +++ + + + L LE L + LQ +PN DVPV + +
Sbjct: 62 KAQGEDVSSMMDNVERISQDLAKLEPLLEQKESTLQDMLVRLPNYPDEDVPVCPDKTGNQ 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K VG F+F K H +L + L I DF A+ SGS + KN+ V LE L+ + L
Sbjct: 122 VIKQVGALPTFSFTPKHHVELNQKLQILDFKLPAKTSGSGWPAYKNQGVCLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ + GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G H
Sbjct: 182 NKQREHGFQLWLPPLLVKHEILFGSGQIPK-FDGQYYRVEDGEQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I SE LP+ YAAF+ CFR EAGAAG RGL RVHQF K+EMF F P+++D +E
Sbjct: 241 SQEIFSEKDLPIYYAAFTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPDQADQAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ + ED+ + L L ++L L
Sbjct: 301 KMLAVVEDILTELQLPYRLSLL 322
>gi|302672302|ref|YP_003832262.1| seryl-tRNA synthetase SerS [Butyrivibrio proteoclasticus B316]
gi|302396775|gb|ADL35680.1| seryl-tRNA synthetase SerS [Butyrivibrio proteoclasticus B316]
Length = 431
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 175/327 (53%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+ + + L LV ++L E+ Q+E D +R +N ++ ++
Sbjct: 2 IDIKFLRENPDVVRENIKKKFQDEKLPLVDEVIKLDEQRRTNQQEADEIRAHKNKISKEI 61
Query: 132 KGKLEPSERQKLI-------EEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
G + ++ + + +E K L+E LEE+ KL +E+ + IP + VP
Sbjct: 62 GGLMAQGKKDEAMALKDEVAKEAKRLEE----LEENQKKLDEEVTNKMMIIPQIIDESVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F + H + ++ D D DAA V+G+ FYYL + L
Sbjct: 118 IGKDDSQNVEIEKFGEPVVPDFEIPYHTDIMESFDGIDLDAARRVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++ +VV P +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYCVPPFMIHGNVVAGVMSFPE-MEAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D I+ E +P ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDQIIPEEEMPKALTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVICKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES +++++L + DL+ S+ + + L
Sbjct: 297 ESKAWYDKLWKNTVDLFRSMDIPVRTL 323
>gi|269122820|ref|YP_003305397.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
gi|268314146|gb|ACZ00520.1| seryl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
Length = 422
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 177/334 (52%), Gaps = 34/334 (10%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+IR+N E V ++NR S NL+ +LE+ K + EV+ L++ERN V+ +
Sbjct: 2 LDMKFIRENVELVKQGLKNRKSEYNLDELLEMDIKRRTLLTEVETLKKERNDVSAII--- 58
Query: 135 LEPSERQKLIEEGKNLKEGL--VTLEEDLVKLTDELQQ---------EAQ-----CIPNM 178
GKN +EG+ L+E++ K+++++++ E Q IPN+
Sbjct: 59 ------------GKNAREGIDSTELKENMAKVSNKIKELDVEVLEIEEKQKMLLLTIPNV 106
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G P+ FNF VK H +LG LDI DF+ A++SGS+F K
Sbjct: 107 PHVSTPVGESEDDNVEIRRWGKPTEFNFEVKSHDELGVNLDILDFERGAKLSGSRFTVYK 166
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ L + GFT + TP++ + ++ G P+ +Y I+G D
Sbjct: 167 GMGARLERALINFMLDVHTEEHGFTEILTPQLAKKDIMIGTGQLPK-FEEDMYKIQGEDL 225
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+ + ++ IL E LP + F+ CFR EAG+ G +GL R HQF+K+EM
Sbjct: 226 YLIPTAEVTLTNMYAGEILKEEELPKHFCGFTACFRQEAGSGGRDLKGLIRQHQFNKVEM 285
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
P++S E + E + L L +++L
Sbjct: 286 VKIVHPDKSYEELEHMTNCGEKILQKLNLPYRVL 319
>gi|239617246|ref|YP_002940568.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|259511674|sp|C5CGC3.1|SYS_KOSOT RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239506077|gb|ACR79564.1| seryl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 424
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 179/323 (55%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVAN---K 130
ID + +R+N E + A ++NR + + L+ +LEL + DR + ERN +++ K
Sbjct: 2 IDIRLVRENPEKIRAALKNRCVDESILDELLELDKARREAISTSDRKKAERNKISSQIAK 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--E 188
K + + ++L+E+ K++ + L E KL +E++ + IPN+ H VPVG E
Sbjct: 62 AKASGDEALAKELMEKAKDISVEVKELSEKAKKLDEEMRNKLLYIPNIPHESVPVGESEE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D ++RK G P F+F H+ LG L + DF+ AA++SGS+F L+ E LE LI
Sbjct: 122 DNVVVRKW-GEPRQFDFDSLAHWDLGPNLGMMDFERAAKLSGSRFVILRKELARLERALI 180
Query: 249 NWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ L + G+ + P +V+ ++ G P+ + Y + D LI TAE+P+
Sbjct: 181 NFMLDLHTREHGYEEVALPHLVKRETMQATGQLPK-FEEEAYKTDPDDMFLIPTAEVPLV 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
H D IL+ + LP KY A++ C+R EAG+ G +G+ RVHQF K+E+ F P+ES
Sbjct: 240 AQHRDEILNLNELPRKYTAYTPCYRREAGSYGKDVKGMIRVHQFDKVELVWFVHPDESYE 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L E++ LGL ++++
Sbjct: 300 ALEKLTADAEEVLKRLGLPYRVV 322
>gi|118575306|ref|YP_875049.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
gi|166228637|sp|A0RTS8.1|SYS_CENSY RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118193827|gb|ABK76745.1| seryl-tRNA synthetase [Cenarchaeum symbiosum A]
Length = 418
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 176/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D +R + VS ++ RN + +L+ +L+ E+ + D +R+ERN ++ +
Sbjct: 2 LDPHILRSRPKDVSDMLQARNVDFDLDALLDADERRRYFMQLADDMRQERNFAGRQVAQF 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS-- 191
K + + I+E K+L E L E + E + A IPNM VP G ++ +
Sbjct: 62 KRDGVDTTAAIKEMKDLSEKLYQAEGEQQSAESEYLELAWTIPNMIDKSVPRGPDETANV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++RK VG P+ + P K H +L + D AA+VSG++FYYLK V L LI+ +
Sbjct: 122 VLRKWVGTPTP-SVP-KGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQALISHS 179
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L + RG+T + P ++R + +E + +Y IE D LIGT+E + +H
Sbjct: 180 LDFLGSRGYTLVQPPYLIRRNAMEGAIIAEDFEDV-IYKIEDDDLYLIGTSEHAMAAMHS 238
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D I+ E LPL+YA S CFR EAGA G +G++RVHQF K+E FVF +PE+S H+
Sbjct: 239 DEII-EGGLPLRYAGVSPCFRKEAGAHGKDQKGIFRVHQFDKIEQFVFSKPEDSWREHDR 297
Query: 372 LIRIEEDLYSSLGLHFKLLLF 392
++ I E+ Y LG+ ++++L
Sbjct: 298 MLEITEEFYQGLGIPYRVVLL 318
>gi|118467339|ref|YP_879487.1| seryl-tRNA synthetase [Mycobacterium avium 104]
gi|254773252|ref|ZP_05214768.1| seryl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
gi|166222745|sp|A0Q999.1|SYS_MYCA1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118168626|gb|ABK69523.1| seryl-tRNA synthetase [Mycobacterium avium 104]
Length = 425
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 174/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +R++ +AV + ++R + +L L + D LR E+ + A+K G
Sbjct: 2 IDLKLLREDPDAVRRSQQSRGEDPSLVDALLAADAARRAAISTADTLRAEQKS-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P +R L+ K L E + E + I N+ VP GGED +
Sbjct: 61 AASPEQRPALLARAKELAEQVKAAETAQAEAEAAFTAAHLAISNVVIDGVPAGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P+ P +DH +LG++L + D A+VSGS+FY+L + +L++GL+ L
Sbjct: 121 LDVVGEPTALENP-RDHLELGESLGLIDMARGAKVSGSRFYFLTGKGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
++ GF P+ P +VR V+ GF GA+ + VY IE D L+GT+E+P+ G H D
Sbjct: 180 LAVENGFVPMIPPVLVRPEVMAGTGFL--GAHAEEVYRIEADDLYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L
Sbjct: 238 EILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + ++ + + + ++++
Sbjct: 298 LGWQREMLARIEVPYRVI 315
>gi|433636932|ref|YP_007270559.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
gi|432168525|emb|CCK66065.1| Seryl-tRNA synthetase [Mycobacterium canettii CIPT 140070017]
Length = 419
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 169/318 (53%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N +AV + +R + L + +L D LR E+ A A+K G
Sbjct: 2 IDLKLLRENPDAVRRSQLSRGEDPALVDALLTADAARRAAISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPALLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHEGL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|348523616|ref|XP_003449319.1| PREDICTED: seryl-tRNA synthetase, mitochondrial-like [Oreochromis
niloticus]
Length = 521
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 183/337 (54%), Gaps = 19/337 (5%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSN---ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
K +D + + + + V AN+ +R + ++ ++ +++++ V+ E+ L EE+ ++
Sbjct: 58 KPELDMRAVCEETDKVIANVESRKGDLRGDDVRKIVCVWQELQAVKTEISELEEEKRRIS 117
Query: 129 NKMKGKLEPSERQKL---------IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMT 179
+ ++G + +++ L +++G+ ++ L L +L +E A +PN T
Sbjct: 118 DIVRGLVTKEDKKALANLPEYNQALQKGREIRNRLNHLYHKETELDEEHYGRALRLPNTT 177
Query: 180 HPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNE 239
HP VPVG E + + + VG F+F K H +LG+ L + A VSG + YYL+
Sbjct: 178 HPAVPVGDESQARMVELVGQKPEFDFKPKGHVELGEELGLIRQRHLAHVSGHRSYYLRGA 237
Query: 240 AVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQ 296
L+ L N+ L + +RGF P+ P++++ +V E CG QP ++QVYS++ A D
Sbjct: 238 GARLQAALQNFALDTLQRRGFIPMVVPDMLKGAVFEGCGMQPNAQSSQVYSLDPARFPDL 297
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
L GT E+ V G MD ++ LP++ S C+R E G T GLYRVH F+K+EM
Sbjct: 298 NLAGTGEVGVAGYFMDHAVNWKDLPVRTVCSSTCYRAETD-TGRETWGLYRVHHFNKVEM 356
Query: 357 FVFCQP---EESDSYHEELIRIEEDLYSSLGLHFKLL 390
F EES +E + ++++++S+L LH+++L
Sbjct: 357 FGVTADETGEESSQLLQEFVSLQKEMFSALELHYRVL 393
>gi|158316889|ref|YP_001509397.1| seryl-tRNA synthetase [Frankia sp. EAN1pec]
gi|158112294|gb|ABW14491.1| seryl-tRNA synthetase [Frankia sp. EAN1pec]
Length = 420
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 169/319 (52%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IR+N +AV +R + + +++ +L+L ++ +Q EVD + R + A + K
Sbjct: 2 LDKRFIRENPDAVKEAVRLKGVDLDVDELLQLDQENRKLQFEVDEAQARRKSFAKQF-AK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+ + R +L E L L E L + + + + P + PVG E +++
Sbjct: 61 ADEARRAELRAEHAEFDRQLRDLREQLTRTSTRMSELMLLTPGIPWEGAPVGPDESANVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG F+F DH +L + +F A V+G + Y L + VMLE + ++ L
Sbjct: 121 VRTVGTRPEFDFTPIDHTELAEKRGWAEFARARRVAGERAYALVGDMVMLERAVHSYALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ +R FTP++ P +V+ + G P+ A ++Y I D L GTAE+ + G+H
Sbjct: 181 LLRERDFTPVSVPALVKEGPLVGTGMLPK-AREEIYEIPADDAFLAGTAEVALVGLHAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC--QPEESDSYHEE 371
IL LP++YA S CFR E G+A RGL RVHQF K+E FV C P ES +H E
Sbjct: 240 ILDARRLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCVNDPAESARWHAE 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + + LGLH++++
Sbjct: 300 LLATAEHILADLGLHYEVV 318
>gi|373123466|ref|ZP_09537312.1| serine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
gi|422325719|ref|ZP_16406747.1| serine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
gi|371660799|gb|EHO26043.1| serine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
gi|371667467|gb|EHO32592.1| serine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
Length = 428
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 179/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + +ELV + + ++ ++++ D LR +RNA++ ++
Sbjct: 2 LDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKEI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDL-------VKLTDELQQEAQCIPNMTHPDVP 184
G + + L +E +K + + +++ +L +++++ IPN+ HP VP
Sbjct: 62 GGLMA----KGLKDEANAIKAKVQAMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
VG +D + + G P + +F + H + + + D D+A +V+G+ FYYL + L
Sbjct: 118 VGKDDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT + P ++RS+VV +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYVVPPFMIRSNVVTGV-MSFAEMEGMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D+IL E LP Y ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + +L DL+ SL + + L
Sbjct: 297 ESADWFVKLYTNTVDLFRSLDIPVRTL 323
>gi|187777605|ref|ZP_02994078.1| hypothetical protein CLOSPO_01197 [Clostridium sporogenes ATCC
15579]
gi|187774533|gb|EDU38335.1| serine--tRNA ligase [Clostridium sporogenes ATCC 15579]
Length = 425
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 178/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V N+R + LELV E+ ++ N++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENMRKKFQYNKLELVDEVIALDIELRNIKPEADTLRAKRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L ++ + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKGEAEELKKQVTAASDHLAELEKREGELEEKIKRIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPIVPDFEVPYHTEIMEKFSGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGF P ++RS VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFIYCIPPFMIRSEVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+IL E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTILLEASLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSTM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|222100186|ref|YP_002534754.1| seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
gi|254783498|sp|B9K8V5.1|SYS_THENN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|221572576|gb|ACM23388.1| Seryl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
Length = 425
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 176/322 (54%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVAN---K 130
ID K IR + + V ++ R + ++ + +L++ + +V E++ LR +RN ++ K
Sbjct: 2 IDIKLIRQDPDFVKDALKKRGEDTDIIDEILKIDSEWRSVTTELNELRAKRNDISKNVAK 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K + + SE LIEEGK + E + +LEE +L +L+ +PN+ H VPVG ++
Sbjct: 62 LKKEGKSSEANALIEEGKRIGEEIKSLEEKEKELQSKLRDLLLRVPNIPHESVPVGSDES 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+F H+ LG A + DFD A+++SGS+F + + LE LIN
Sbjct: 122 QNVEVRRWGEPRKFDFAPLAHWDLGPAWGLMDFDRASKLSGSRFTVMYGKLARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + G+T + P +V+ + G P+ ++Y E D LI TAE+P+
Sbjct: 182 FMLDVHTREHGYTEVWVPHLVKRETITITGQLPK-FEEELYLTEKDDLFLIPTAEVPLVA 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+H IL E LP KY A++ C+R EAG+ G RG+ R HQF K+E+ PE S
Sbjct: 241 LHSGEILEEKDLPKKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFDD 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L+R E + LGL ++++
Sbjct: 301 LEQLVRDAETILQRLGLPYRVV 322
>gi|153811956|ref|ZP_01964624.1| hypothetical protein RUMOBE_02349 [Ruminococcus obeum ATCC 29174]
gi|149831855|gb|EDM86941.1| serine--tRNA ligase [Ruminococcus obeum ATCC 29174]
Length = 431
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 174/323 (53%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + LELV +EL ++ +++EV+ LR ERN + ++
Sbjct: 2 LDIKFVRENPEIVKQNIRNKFQDNKLELVDKVIELDKENREIKQEVEALRAERNKTSKQI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEE---DLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ +R + E K + ++E ++ +EL + IPN+ P VP+G +
Sbjct: 62 GALMAQGKRDEAEEVKKQVAASGARIDELSAREKEVEEELLKNMMVIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H + ++ D D D+A V+G+ FYYL + L +
Sbjct: 122 DSENVEIEKFGEPVVPDFEVPYHTDIMESFDGIDLDSARRVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I + +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 IAYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDQIVPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 301 WFDKLWQNTVDLFRSLDIPVRTL 323
>gi|300769636|ref|ZP_07079520.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300492789|gb|EFK27973.1| serine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 434
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 181/318 (56%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 16 KFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 74
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 75 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 134
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F+F K H++LG++L I DFD AA+V+G++F Y K+ +LE + ++ L
Sbjct: 135 MRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSFMLD 194
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 195 LHTQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 253
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 254 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 313
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 314 TDNAEEVLRELGLAYHVI 331
>gi|152964219|ref|YP_001360003.1| seryl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
gi|151358736|gb|ABS01739.1| seryl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
Length = 431
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 183/325 (56%), Gaps = 16/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD + V A+ R R + + + VL+ + E ++LR E K +G
Sbjct: 9 IDLRLLRDEPDVVRASQRARGEDEGVVDRVLDADARRRASIAEFEQLRAE-----QKSRG 63
Query: 134 KL----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED 189
KL + E+Q+L+ K L E + E + +E + + IPN+ VP GGED
Sbjct: 64 KLVAAAKGEEKQQLLAGVKELSERVKAAEARSNEAGEEFEALLRSIPNVVEDGVPAGGED 123
Query: 190 CSIIRKTVGNPSVFNFPV---KDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
++ + VG+P + +DH LG+ L D + A+V+GS+FY+L +LE+
Sbjct: 124 DYVVLEEVGSPPSLPEGLDAWRDHLDLGERLGAIDMERGAKVAGSRFYFLTGVGALLELA 183
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT-QVYSIEGADQCLIGTAEIP 305
L+N +++ + GFTP+ TP +V+ V+ GF GA+ +VY +E D L GT+E+
Sbjct: 184 LLNLAVAKAVANGFTPMITPTLVKPEVMAGTGFL--GAHAAEVYHLEEDDLYLTGTSEVA 241
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G H D IL S P +YA +S C+R EAG+ G TRG+ RVHQF K+EMF +C+PE++
Sbjct: 242 LAGYHGDEILDLSAGPKRYAGWSACYRREAGSYGKDTRGVIRVHQFHKVEMFSYCRPEDA 301
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ H L+ E+D+ +++ + ++++
Sbjct: 302 AAEHRRLLGFEKDMLAAVEVPYRVI 326
>gi|392940049|ref|ZP_10305693.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|392291799|gb|EIW00243.1| seryl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 423
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 184/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N EAV + + A+++ LEL EK + E++ L+ RN ++ + K
Sbjct: 2 LDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEKRRQMLVELETLKNRRNVESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + LI E K L + + +E+++ ++ +EL++ IPN+ H VP+G ED
Sbjct: 62 KREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ L I DF+AAA V+GS+F + K LE LIN+
Sbjct: 122 EIRRW-GEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + K G+T + P +V + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDLHIEKHGYTEVFPPFMVHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F P++S E
Sbjct: 240 RDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTDPDKSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ R E++ +LGL ++++
Sbjct: 300 KMTRDAEEVLQALGLPYRVV 319
>gi|415706590|ref|ZP_11461579.1| seryl-tRNA synthetase [Gardnerella vaginalis 0288E]
gi|388054802|gb|EIK77737.1| seryl-tRNA synthetase [Gardnerella vaginalis 0288E]
Length = 428
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + N K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRADDLRRNSLKAFEAARAEQKAIGKKVAA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ SE+ LI + K L + + + + + T + N+ + P GGED ++
Sbjct: 62 A-QDSEKVTLIAQTKELAQKVAEYKAESEQATANYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFTAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|90961171|ref|YP_535087.1| seryl-tRNA synthetase [Lactobacillus salivarius UCC118]
gi|301299680|ref|ZP_07205935.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|122449395|sp|Q1WVB3.1|SYS_LACS1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|90820365|gb|ABD99004.1| Seryl-tRNA synthetase [Lactobacillus salivarius UCC118]
gi|300852720|gb|EFK80349.1| serine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 425
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 180/324 (55%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERN----AVA 128
+D K IR N E + R ELV E +K + E + L++ERN A+A
Sbjct: 2 LDIKDIRLNTEEYKRRLGTRGVKPEEIDELVAED-KKRRELLVETENLKKERNEVSEAIA 60
Query: 129 NKMKGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG- 186
+ K + SE+ Q + + G +KE L+E L K+ + ++ A +PN+ +P +PVG
Sbjct: 61 QAKRNKEDASEQIQAMRKVGTKIKE----LDEKLAKVEENVKSMAAHLPNLPNPTIPVGP 116
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
ED ++ VG P F+F K H+ +G+ L I DFD AA+VSG++F + K LE
Sbjct: 117 DEDSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSGARFVFYKGLGAKLERA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
+ N+ L E K G+T + P IV+S + G P+ + QVY + G D LI TAE+P+
Sbjct: 177 VYNFMLDEHAKEGYTEVIPPYIVKSKSMYGTGQFPKFKD-QVYQVNGEDMTLIPTAEVPL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
+ + ++ LP+ + A S FR+EAG+AG TRGL R+HQF+K+EM + +PE+S
Sbjct: 236 TNYYREEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSY 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ E++ + ++ LGL + ++
Sbjct: 296 NELEKMTKNAGNIMEKLGLPYHVI 319
>gi|254555575|ref|YP_003061992.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
gi|254044502|gb|ACT61295.1| seryl-tRNA synthetase [Lactobacillus plantarum JDM1]
Length = 423
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 181/318 (56%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 5 KFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 63
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 64 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 123
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F+F K H++LG++L I DFD AA+V+G++F Y K+ +LE + ++ L
Sbjct: 124 MRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSFMLD 183
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 184 LHTQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 242
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 243 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 302
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 303 TDNAEEVLHELGLAYHVI 320
>gi|41406295|ref|NP_959131.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|417746603|ref|ZP_12395097.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
S397]
gi|67461823|sp|Q745I8.1|SYS_MYCPA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|41394643|gb|AAS02514.1| SerS [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461883|gb|EGO40738.1| seryl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
S397]
Length = 425
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 173/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ-KEVDRLREERNAVANKMKG 133
ID K +R++ +AV + ++R + +L L + D LR E+ + A+K G
Sbjct: 2 IDLKLLREDPDAVRRSQQSRGEDPSLVDALLAADAARRAAISTADTLRAEQKS-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P +R L+ K L E + E + I N+ VP GGED +
Sbjct: 61 AASPEQRPALLARAKELAEQVKAAETAQAEAEAAFTAAHLAISNVVIDGVPAGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P+ P +DH +LG+ L + D A+VSGS+FY+L + +L++GL+ L
Sbjct: 121 LDVVGEPTALENP-RDHLELGETLGLIDMARGAKVSGSRFYFLTGKGALLQLGLLQLALR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
++ GF P+ P +VR V+ GF GA+ + VY IE D L+GT+E+P+ G H D
Sbjct: 180 LAVENGFVPMIPPVLVRPEVMAGTGFL--GAHAEEVYRIEADDLYLVGTSEVPLAGYHAD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L
Sbjct: 238 EILDLSAGPLRYAGWSSCFRREAGSYGKDTRGVIRVHQFDKVEGFVYCTPADAEAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + ++ + + + ++++
Sbjct: 298 LGWQREMLARIEVPYRVI 315
>gi|406838693|ref|ZP_11098287.1| seryl-tRNA ligase [Lactobacillus vini DSM 20605]
Length = 422
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 176/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKM-K 132
+D K IR N++ V + R A ++ +L +K + E + LR+++N V+ + +
Sbjct: 2 LDIKMIRQNEDEVKERLATRGVKAEKIDELLAADKKRRELVVESETLRQQKNEVSEAIAQ 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K + + I K + + + LE +L + +++ A +PN+ +P +PVG E +
Sbjct: 62 AKRNQQDASQQIARMKKVGQQIKELENNLKEAQTKVEYIASRLPNLPNPSIPVGPDESFN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ K +G P F+F K H+++G+ L I DF A+ +GS+F Y K LE + N+
Sbjct: 122 VELKKIGTPRKFDFTPKPHWEIGEKLGILDFARGAKAAGSRFVYYKGLGAKLERAVYNFM 181
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L E K G+T + P IV ++ + G P+ V+ +EG D LI TAE+P+ +
Sbjct: 182 LDEHTKEGYTEILPPYIVNNASMYGTGQFPK-FKEDVFQVEGQDMTLIPTAEVPLTNYYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
D ++ LP+ + A + CFR+EAG+AG TRGL R+HQF+K+EM +C+PE S + E+
Sbjct: 241 DEVIPTEQLPVYFTALTPCFRSEAGSAGRDTRGLIRMHQFNKVEMVKYCKPENSYNELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
+ + ++ LGL + ++
Sbjct: 301 MTKNAGNIMEKLGLPYHII 319
>gi|167748072|ref|ZP_02420199.1| hypothetical protein ANACAC_02816 [Anaerostipes caccae DSM 14662]
gi|167652064|gb|EDR96193.1| serine--tRNA ligase [Anaerostipes caccae DSM 14662]
Length = 425
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 180/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N EAV NI+N+ + L LV LEL EK +++EV LR RN ++ ++
Sbjct: 2 LDIKFVRENPEAVKQNIKNKFQDRKLPLVDEVLELDEKNREIKQEVQSLRANRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + E ++L +E N + L E+ ++ +++ + IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKEEAEQLKQEVSNQAGRIEELTEEEKEVEEKILKIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + D D+A +V+G FYYL + L +
Sbjct: 122 DSENVEIEKFGEPIVPDFEIPYHTEIMENFSGIDLDSARKVAGQGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RS+VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGVMSFDEMDA--MMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+++ E LP ++S CFR E GA G RG+YR+HQF K EM V C+P+ES
Sbjct: 240 IGKFIDTMIQEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPQESM 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
++E+L + DL+ SL + + L
Sbjct: 300 DWYEKLWKNTVDLFRSLDIPVRTL 323
>gi|157414684|ref|YP_001481940.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|384441041|ref|YP_005657344.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|415744571|ref|ZP_11474600.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
gi|419635647|ref|ZP_14167949.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 55037]
gi|172047058|sp|A8FKH6.1|SYS_CAMJ8 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|157385648|gb|ABV51963.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|307747324|gb|ADN90594.1| Seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|315932677|gb|EFV11607.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
gi|380612423|gb|EIB31950.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 55037]
Length = 411
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E VK L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSVKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ GF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSHGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|340753156|ref|ZP_08689947.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|422315545|ref|ZP_16396977.1| seryl-tRNA synthetase [Fusobacterium periodonticum D10]
gi|229424092|gb|EEO39139.1| seryl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|404592313|gb|EKA94161.1| seryl-tRNA synthetase [Fusobacterium periodonticum D10]
Length = 421
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 176/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ + L K V EV+ L+ +RN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNIDMDAFVALDAKRREVLSEVETLKRDRNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ +E++ IPN+ HP P+G ED +
Sbjct: 62 KKEKKDASHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHPSTPIGPDEDSNK 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LI++ L
Sbjct: 122 EIRRWGEPRKFDFEPKAHWDIGEDLGILDFERGAKLSGSRFVLYRGAAARLERALISFML 181
Query: 253 -SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ ++ G+T TP IV++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DTHTLEHGYTEHITPFIVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E + L L ++++
Sbjct: 300 MVNNAETILQRLELPYRVI 318
>gi|380031519|ref|YP_004888510.1| serine-tRNA synthetase [Lactobacillus plantarum WCFS1]
gi|38258545|sp|Q88Z60.1|SYS1_LACPL RecName: Full=Serine--tRNA ligase 1; AltName: Full=Seryl-tRNA
synthetase 1; Short=SerRS 1; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase 1
gi|342240762|emb|CCC77996.1| serine-tRNA synthetase [Lactobacillus plantarum WCFS1]
Length = 423
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 181/318 (56%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 5 KFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 63
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 64 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 123
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F+F K H++LG++L I DFD AA+V+G++F Y K+ +LE + ++ L
Sbjct: 124 MRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSFMLD 183
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 184 LHTQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 242
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 243 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 302
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 303 TDNAEEVLRELGLAYHVI 320
>gi|256846211|ref|ZP_05551669.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256719770|gb|EEU33325.1| seryl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 424
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 177/322 (54%), Gaps = 5/322 (1%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ++ K++R+N E + ++NRNSN +++ +EL K + EV+ L+ ERN V+ ++
Sbjct: 2 RIMLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K E + LIE+ + + L+ +LV++ ++++ IPN+ HP P+G ED
Sbjct: 62 ANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHPSTPIGLDED 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN
Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L ++ G+T TP +V+ V E G P+ + + D LI T+EI +
Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH IL ++ LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S
Sbjct: 240 IHRKEILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+++ E + L L ++++
Sbjct: 300 LEKMVNNAETILQRLELPYRVI 321
>gi|448820170|ref|YP_007413332.1| Serine--tRNA ligase 1 [Lactobacillus plantarum ZJ316]
gi|448273667|gb|AGE38186.1| Serine--tRNA ligase 1 [Lactobacillus plantarum ZJ316]
Length = 423
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 181/318 (56%), Gaps = 7/318 (2%)
Query: 78 KWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLE 136
K++R+N E V ++ R + A ++ L+L ++ + +V+ L++++N + ++ G+ +
Sbjct: 5 KFVRNNPELVKTKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQI-GQSD 63
Query: 137 PSER--QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
P Q LI++ K L + + E ++ D L A PN+ DVPVG ED ++
Sbjct: 64 PQSEAGQALIQQVKQLNGDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVE 123
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ G+ F+F K H++LG++L I DFD AA+V+G++F Y K+ +LE + ++ L
Sbjct: 124 MRKHGDIPTFDFKPKAHWELGESLGILDFDRAAKVAGARFVYYKDAGALLERAVYSFMLD 183
Query: 254 -EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + P +V + + G P+ VY++E + LI TAE+P+ + +
Sbjct: 184 LHTQKQGYHEIIPPYLVNAQTMYGTGQFPK-FKEDVYTVESSGMTLIPTAEVPLTNYYAN 242
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
ILSE LP + A + C+R+EAG+AG TRGL R+HQF K+EM +C+PE S E+L
Sbjct: 243 EILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKL 302
Query: 373 IRIEEDLYSSLGLHFKLL 390
E++ LGL + ++
Sbjct: 303 TDNAEEVLRELGLAYHVI 320
>gi|238923500|ref|YP_002937016.1| seryl-tRNA synthetase [Eubacterium rectale ATCC 33656]
gi|238875175|gb|ACR74882.1| seryl-tRNA synthetase [Eubacterium rectale ATCC 33656]
gi|291525557|emb|CBK91144.1| seryl-tRNA synthetase [Eubacterium rectale DSM 17629]
gi|291528340|emb|CBK93926.1| seryl-tRNA synthetase [Eubacterium rectale M104/1]
Length = 429
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 177/326 (54%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+ + + L LV E+ E K Q+E D LR ++N V+ ++
Sbjct: 2 IDLKFLRENPDLVKENIKKKFQDHKLPLVDEVIEYDKKAREAQQEADDLRAKKNQVSKQI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K E + + L LE + D++ ++ IPN+ P VP+G
Sbjct: 62 GALMAQGKKEEAEAVKA--EVAQISKRLTELEPLEKEYQDKVLEDMMKIPNIIDPSVPIG 119
Query: 187 GEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D ++ + G P V +F + H + + D D DAA +V+G+ FYYL + L
Sbjct: 120 KDDTFNVENEKFGEPVVPDFEIPYHTDIMERFDGIDLDAAGKVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEI 304
+ + +I +GFT P ++RS+VV F+ A +Y IEG D LIGT+E
Sbjct: 180 AMTAYARDFMIGKGFTYCIPPFMIRSNVVTGVMSFEEMDA--MMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I ES LP ++S CFR E GA G RG+YR+HQF K EM V C+P++
Sbjct: 238 SMIGKFIDTINDESKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPQD 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S ++E++ + +L+ SL + + L
Sbjct: 298 SKEWYEKMWKYTVELFRSLDVPVRTL 323
>gi|239626544|ref|ZP_04669575.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516690|gb|EEQ56556.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 429
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+N+ L LV E L + QKE D LR RN ++ ++
Sbjct: 2 LDLKFVRENPDIVKQNIKNKFQEGKLALVDEVIALDAENRVTQKEADDLRASRNKLSKEI 61
Query: 132 -----KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG 186
+GK E +E K + + L LE +L++++ + IPN+ P VP+G
Sbjct: 62 GKLMAQGKKEEAESVKAQVSANSTR--LAELEAKEGELSEKIMKIMMTIPNIIDPSVPIG 119
Query: 187 GEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
+D + + G P+V +F + H ++ + + D DAA V+G+ FYYL + L
Sbjct: 120 KDDSENVEVERFGEPAVPDFEIPYHTEIMERFEGIDLDAARRVAGNGFYYLMGDIARLHS 179
Query: 246 GLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 180 SVISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 239 MIGKFIDTITPEAQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEES 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+++ L + DL+ +L + + L
Sbjct: 299 PMWYDRLWQNTVDLFRTLDIPVRTL 323
>gi|422417238|ref|ZP_16494195.1| seryl-tRNA synthetase [Listeria innocua FSL J1-023]
gi|313621991|gb|EFR92612.1| seryl-tRNA synthetase [Listeria innocua FSL J1-023]
Length = 436
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 181/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N E V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + IEE + + + + TL+ +L ++ ++L IPN+
Sbjct: 57 LKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDTILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVL 329
>gi|255283799|ref|ZP_05348354.1| serine--tRNA ligase [Bryantella formatexigens DSM 14469]
gi|255265682|gb|EET58887.1| serine--tRNA ligase [Marvinbryantia formatexigens DSM 14469]
Length = 429
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 178/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + L +V E L ++ ++ EV+ LR RN ++ ++
Sbjct: 2 LDIKFLRENPEIVKQNIRNKFQDQKLPMVDEVIALDKRNREIKNEVEALRANRNKLSKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL--KEGLV-TLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ +R+K E K + + G V L ++ ++ + +++ IPN+ P VP+G +
Sbjct: 62 GALMGQGKREKAEEIKKQVAAQAGQVEALSQEEKEVEENIRRIMMVIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + D D DAA EV+G+ FYYL + + +
Sbjct: 122 DSENVEIEKFGEPVVPDFEIPYHTEIMERFDGIDLDAAREVAGNGFYYLMGDIARIHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSKVVTGV-MSFAEMESMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +DS+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDSLTPEAELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSMM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 301 WYDKLWQNTVDLFRSLDIPVRTL 323
>gi|168003459|ref|XP_001754430.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694532|gb|EDQ80880.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 179/316 (56%), Gaps = 9/316 (2%)
Query: 82 DNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGK-LEPSE 139
++ E + + R R ++ L + V++L ++ Q EVD +R+E N V + +K K + +
Sbjct: 13 NDPERIRESQRRRFASVELVDEVIKLDKEWRQRQYEVDNIRKEVNKVQDGIKKKKMAKED 72
Query: 140 RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV-GGEDCSIIRKTVG 198
+L+ E L+E + E++ + ++ + + N+ H VP+ ED +++ +T G
Sbjct: 73 TAELLVEKSKLEEAKIAKEKETAECKVAMEASLRLVGNLVHDSVPIDNNEDNNLVVRTWG 132
Query: 199 NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKR 258
P + V +H L L I D +A +V+G + Y+LK VML LIN+ L+ ++KR
Sbjct: 133 TPRDQSGLV-NHVDLVNKLGIVDLEAGTDVAGGRGYFLKQYGVMLNQALINFGLAFLLKR 191
Query: 259 GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIPVGGIHMDSILS 316
G+T L TP +R V+ +C Q + ++Y + EG D+ LI TAE P+ H S +
Sbjct: 192 GYTLLQTPFFMRQEVMAECA-QLAQFDEELYKVTGEGDDKYLIATAEQPLCSFHRGSWMD 250
Query: 317 ESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY--HEELIR 374
LP+KYA +S CFR EAG+ G T G++RVHQF K+E F P ++DS+ HEE+++
Sbjct: 251 PKALPIKYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWEVHEEMLK 310
Query: 375 IEEDLYSSLGLHFKLL 390
E+ Y LGL ++++
Sbjct: 311 NSEEFYQQLGLPYRVV 326
>gi|225570312|ref|ZP_03779337.1| hypothetical protein CLOHYLEM_06409 [Clostridium hylemonae DSM
15053]
gi|225160844|gb|EEG73463.1| hypothetical protein CLOHYLEM_06409 [Clostridium hylemonae DSM
15053]
Length = 427
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 185/323 (57%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+ + + L LV L+L +K ++++EV+ LR +RN ++ ++
Sbjct: 2 LDIKFVRNNPDIVKENIKKKFQDDKLPLVDEVLQLDQKNRDIKQEVEALRADRNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEG---LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ ++++ E K ++E + TL + ++ +++++ IPN+ P VP+G +
Sbjct: 62 GACMAQGKKEEAEELKKKVQENADRVETLSAEEKQVEEKIKKIMMSIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + + D ++A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQKYGEPVVPDFEIPYHTEIMENFNGIDLESAGKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I + +I RGFT P ++RS+VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ITYARDFMIDRGFTYCIPPFMIRSNVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D++LSE LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES +
Sbjct: 241 GKFIDTMLSEDQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCRPEESKT 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 301 WYDKLWQNTVDLFRSLDIPVRTL 323
>gi|83588895|ref|YP_428904.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|123525300|sp|Q2RMH8.1|SYS_MOOTA RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|83571809|gb|ABC18361.1| seryl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 427
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 177/325 (54%), Gaps = 8/325 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D + +R + E V+ + R A LE LEL + N+ EV+ L+ RN V+ ++ +
Sbjct: 2 LDIRVVRQDPEGVARGLARRGLAAGLEHFLELDARRRNLLVEVEGLKNRRNQVSAEVARL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K + +LI + + E + L+E + + +EL+QE +PN+ H VP G D
Sbjct: 62 KKSGQDATELIASMREVGERIKELDEKVRAVEEELRQEMLKLPNIPHASVPDGLSDAD-- 119
Query: 194 RKTV---GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K V G F F + H+++ + L I DF+ +V+G++F + + LE LIN+
Sbjct: 120 NKPVRHWGELPRFKFEPRPHWEIAENLGIVDFERGGKVAGARFVFYRGAGARLERALINF 179
Query: 251 TLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L IK G+T + P +V S+ + G P+ A ++ +EG D LI TAE+PV +
Sbjct: 180 MLDLHTIKHGYTEIFPPYMVNSASMLGTGQLPKFAE-DMFHVEGTDYYLIPTAEVPVTNL 238
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE+S
Sbjct: 239 YRGEILPGEKLPIYHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPEDSYEEL 298
Query: 370 EELIRIEEDLYSSLGLHFKLLLFLA 394
E+L R E++ LGL ++++ A
Sbjct: 299 EKLTRDAEEVLQLLGLPYRVVALCA 323
>gi|386009525|ref|YP_005927803.1| serS [Listeria monocytogenes L99]
gi|404409125|ref|YP_006691840.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2376]
gi|307572335|emb|CAR85514.1| serS [Listeria monocytogenes L99]
gi|404243274|emb|CBY64674.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2376]
Length = 436
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 182/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N + V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + IEE + + + + TL+ +L ++ ++L IPN+
Sbjct: 57 LKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S + E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVL 329
>gi|386853239|ref|YP_006271252.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
gi|359840743|gb|AEV89184.1| seryl-tRNA synthetase [Actinoplanes sp. SE50/110]
Length = 419
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 178/318 (55%), Gaps = 7/318 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +RD+ + + A+ R R + L + +L E+ + + + +R E+ ++ ++
Sbjct: 2 IDLRLLRDDPDLIRASQRLRGESTELVDDLLRADEERRSATQRFETVRAEQRSIGKEV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K ER L+ K L + E + L++ +PN+ P GGED ++
Sbjct: 61 KASGDERAALLTRTKELAAAVKAAEAAAGEAEQALKRAHLAVPNVVD-GAPPGGEDDFVV 119
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+ VG P KDH ++G+AL D + A+VSGS+FY+L +L++G++ +
Sbjct: 120 LREVGPIPEIAEP-KDHLEIGEALAAIDTERGAKVSGSRFYFLTGVGALLQLGMLQLAIQ 178
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGAN-TQVYSIEGADQCLIGTAEIPVGGIHMD 312
+ ++ GFTP TP +VR +E GF GA+ +++Y +E D L+GT+E+ + H +
Sbjct: 179 QAVEHGFTPSITPTLVRPESMEGTGFL--GAHASEIYRLEADDLYLVGTSEVALAAYHSN 236
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S P ++A +S C+R EAG+ G RG+ RVHQF K+EMF FC+PE++ H+ L
Sbjct: 237 EILDLSAGPSRFAGWSTCYRREAGSHGKDVRGILRVHQFDKVEMFSFCRPEDAAEEHQRL 296
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ +EE++ + + + ++++
Sbjct: 297 LAMEEEMLAKVEIPYRVI 314
>gi|347550082|ref|YP_004856410.1| putative seryl-trna synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346983153|emb|CBW87201.1| Putative seryl-trna synthetase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 428
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 175/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKM-K 132
+D K +R+N E V ++NR + E EL ++ + E + L+ +RN V+ ++ K
Sbjct: 2 LDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIAK 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + IEE + + + + TL+ +L ++ D+L IPN+ H PVG ED +
Sbjct: 62 LKREKQDADAKIEEMRVVGDRIKTLDIELKEIDDKLDTILMSIPNIPHESTPVGESEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
I + G F+F K H+ LG LDI DF+ AA+V+GS+F + K LE LIN+
Sbjct: 122 IEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + G+ + P +V + + G P+ + IE D LI TAE+PV H
Sbjct: 182 MDLHSNEHGYEEMLPPYMVNRTSMTGTGQLPK-FEEDAFLIEAEDYFLIPTAEVPVTNYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S + E
Sbjct: 241 REDILKAEDLPRKYTAFSTCFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAALE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E++ L L +++L
Sbjct: 301 KLTGNAEEVLRRLELPYRVL 320
>gi|441472555|emb|CCQ22310.1| Serine--tRNA ligase [Listeria monocytogenes]
gi|441475702|emb|CCQ25456.1| Serine--tRNA ligase [Listeria monocytogenes N53-1]
Length = 390
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 181/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N + V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + IEE + + + + TL+ +L ++ ++L IPN+
Sbjct: 57 LKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVL 329
>gi|46400763|emb|CAF24212.1| probable seryl-tRNA synthetase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 453
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 179/327 (54%), Gaps = 7/327 (2%)
Query: 73 AAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK 132
A ID + IR ++ AV ++ ++ +L + L + + +V+ L+ +RN ++ K+
Sbjct: 27 AMIDIRLIRKDRFAVEKQLKTKDPQIDLTNICHLDHSIREAKTKVETLKAKRNEISQKI- 85
Query: 133 GKLEPSERQ--KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-D 189
G+++ + + L+ E + L+ + + ++ E +PN+ D+ + +
Sbjct: 86 GEMKRANQDTFSLMNEVAGFGTEIHFLDNQIKEWEEQFNYELSSLPNLPMEDIKISQDPK 145
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+++ K G +F+FP K+H +L + L++FDF A++SG+ + + LE LI
Sbjct: 146 ENVVIKEFGQKPIFSFPFKNHVELNEKLNLFDFKRGAKISGTGWPVYRAMGARLEWALIQ 205
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVG 307
+ + +K GFT P +VR + V G P+ +Q + I+ D LI TAE+P+
Sbjct: 206 YMIEIHVKNGFTQWIPPLLVRKNTVFGSGQLPK-FESQQFKIQDEDYHLYLIPTAEVPLN 264
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G+HMD I+ + L LKY A++ CFR EAGAAG+ RGL R+HQF+K+EMF F +PEES
Sbjct: 265 GLHMDEIIPQEELSLKYVAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFTKPEESAQ 324
Query: 368 YHEELIRIEEDLYSSLGLHFKLLLFLA 394
+++ E++ L LH++ L +
Sbjct: 325 VFNQMMDSAEEILQGLELHYRNALLVT 351
>gi|399924466|ref|ZP_10781824.1| seryl-tRNA synthetase [Peptoniphilus rhinitidis 1-13]
Length = 428
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 171/323 (52%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N EAV NI+ + L LV +++ E++ + + + D LR E+N + ++
Sbjct: 2 LDIKFVRENPEAVRENIKKKFQEDKLPLVDEVIKIDEELRDAKTKGDNLRAEKNKTSKEI 61
Query: 132 KGKLEPSERQKLIEEGKN---LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
++ E+ K + K + E + LEE L +EL++ Q IP M VP+G +
Sbjct: 62 GSFMQKGEKDKAEDAKKRVAEINEEITGLEESERNLAEELKKRMQVIPQMIDKSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P + ++ + H + + D D D+A SGS FYYLK + L +
Sbjct: 122 DSENVEIEKFGEPVIPDYEIPYHVDIMETFDGIDLDSARNTSGSGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGF P ++RS VV N +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFEYHIPPFMIRSDVVTGVMSFAEMENM-MYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G ++++I E +PL ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKYINTITPEENMPLAMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVVICKPEDSKD 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+ +L + D + SL + + L
Sbjct: 301 WFVKLWQNTVDFFRSLEIPVRTL 323
>gi|375139098|ref|YP_004999747.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
gi|359819719|gb|AEV72532.1| seryl-tRNA synthetase [Mycobacterium rhodesiae NBB3]
Length = 431
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 177/318 (55%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+N + V A+ R R + L + +L+ + D LR E+ A + K+ G
Sbjct: 14 IDLKLLRENPDTVRASQRARGEDPALVDALLDADAARRSAVSAADNLRAEQKAESKKV-G 72
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K P ER L+ K L E + E + + + + N+ VP GGED ++
Sbjct: 73 KASPDERPALLAAAKALAEKVKAAEAEQSETDAAFTRAHMALSNVIIDGVPAGGEDDFVV 132
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P + P KDH +LG++L + D + A+VSGS+FY+L L++GL+
Sbjct: 133 LDTVGEPRAIDRP-KDHVELGESLGLIDLERGAKVSGSRFYFLTGAGAFLQLGLLQLAAR 191
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF GA+ + VY + D L+GT+E+ + G H D
Sbjct: 192 LAQENGFTLMIPPVLVRPEVMAGTGFL--GAHAEEVYHLAADDLYLVGTSEVALAGYHSD 249
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E F++C+PE++++ H+ L
Sbjct: 250 EILDLSNGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFIYCKPEDAETEHQRL 309
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E + +++ + ++++
Sbjct: 310 LGWERQMLANIDVPYRVI 327
>gi|284800367|ref|YP_003412232.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284993552|ref|YP_003415320.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|404285256|ref|YP_006686153.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|404411999|ref|YP_006697587.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC5850]
gi|404414825|ref|YP_006700412.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|405759812|ref|YP_006689088.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|284055929|gb|ADB66870.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284059019|gb|ADB69958.1| seryl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|404231825|emb|CBY53229.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC5850]
gi|404234758|emb|CBY56161.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|404237694|emb|CBY59096.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|404240524|emb|CBY61925.1| seryl-tRNA synthetase [Listeria monocytogenes SLCC7179]
Length = 436
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 181/334 (54%), Gaps = 12/334 (3%)
Query: 61 NKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDR 119
NKGGV++ +D K +R+N + V ++NR + E EL ++ + E +
Sbjct: 4 NKGGVSM-------LDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEA 56
Query: 120 LREERNAVANKM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNM 178
L+ +RN V+ ++ K K E + IEE + + + + TL+ +L ++ ++L IPN+
Sbjct: 57 LKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNI 116
Query: 179 THPDVPVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 237
H PVG ED ++ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K
Sbjct: 117 PHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYK 176
Query: 238 NEAVMLEMGLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
LE LIN+ + + G+ + P +V + + G P+ + IE D
Sbjct: 177 KLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDY 235
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LI TAE+PV H + IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+
Sbjct: 236 FLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVEL 295
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S E+L E++ L L +++L
Sbjct: 296 VQFVKPEDSYVALEKLTGNAEEVLRRLELPYRVL 329
>gi|406879738|gb|EKD28256.1| hypothetical protein ACD_79C00366G0001 [uncultured bacterium]
Length = 425
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 178/322 (55%), Gaps = 11/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-- 132
+D K+IRDNKE V I +N + +L+ +L L +K K+V EE+ A+ NK+
Sbjct: 2 LDIKFIRDNKELVREGISGKNCSIDLDKLLMLDDKRRTKLKDV----EEQKALLNKVNKD 57
Query: 133 -GKLEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED 189
G L+ S I E K + + + ++ ++ + E+ IPN+ H PVG E
Sbjct: 58 IGNLKKSGISSDDKIHEMKGVSKSIKEIDVEISAIEQEINNILLYIPNIPHSTTPVGNES 117
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G F+F K H++L + LDI DF A++SGS F K E ++E LIN
Sbjct: 118 SNVEVRKWGEIPEFSFTPKPHWELAEELDIVDFKRGAKLSGSGFLLFKKEGSLMERALIN 177
Query: 250 WTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ + + V K GFT ++ P V + + G P+ N +Y +E D LI TAE+PV
Sbjct: 178 YFIDTHVCKNGFTEVSPPFAVNRATMTGTGQLPKMEN-DMYRLEQDDLFLIPTAEVPVTN 236
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
I + + ES LP+KY A+S CFR EAG+ G TRG+ R+HQF K+EM + +PE+S +
Sbjct: 237 IFSNETIDESDLPVKYVAYSPCFRREAGSYGKDTRGMVRIHQFDKVEMVAWVKPEKSYEF 296
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
EEL E++ +L L +++L
Sbjct: 297 LEELTGYAEEILKALKLPYRVL 318
>gi|295396631|ref|ZP_06806785.1| serine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970515|gb|EFG46436.1| serine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
Length = 428
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 175/324 (54%), Gaps = 13/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N E A+ R R ++ L + ++ + E + +R ++ A K+
Sbjct: 2 IDLVQLRENPEIFKASQRARGASVELVDQIVAADSARRSAIAEFEEIRAQQKAFGKKVAS 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI----PNMTHPDVPVGGED 189
+ + + KL+ E K + + + L+ D DE QQ + I PN+ VP GGE+
Sbjct: 62 EKDKDAKAKLVAEAKEMSDRVKALQAD----NDEAQQNFERILMKLPNLIIDGVPSGGEE 117
Query: 190 CSI-IRK--TVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
S+ +R+ TV + S F DH ++G+ L+ D A+VSGS+F++L LEM
Sbjct: 118 DSVELRREGTVRDFSTDGFEPVDHLEIGERLNAIDTTRGAKVSGSRFHFLTGFGARLEMA 177
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
L+N + I GFTP+ P +V+ V+ GF A+ +VY +E D L+GT+E+P+
Sbjct: 178 LLNLAMDTAISAGFTPMVVPTLVKPEVMGGTGFLGEHAD-EVYRLEADDLFLVGTSEVPL 236
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G MD I+ S P+++ S C+R EAG+ G TRG+ RVHQF K+EMF + ++++
Sbjct: 237 AGYFMDEIIDLSDGPIRFGGISSCYRREAGSYGKDTRGIIRVHQFQKVEMFSYVHQDDAE 296
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
H ++ ++E + + L ++++
Sbjct: 297 DEHLRMLSLQEQMLQACELPYRVI 320
>gi|359419849|ref|ZP_09211795.1| seryl-tRNA synthetase [Gordonia araii NBRC 100433]
gi|358244219|dbj|GAB09864.1| seryl-tRNA synthetase [Gordonia araii NBRC 100433]
Length = 424
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 179/321 (55%), Gaps = 6/321 (1%)
Query: 71 WKAAIDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVAN 129
W+ ID K +RD E V + R R + L + LE + E D LR E+ ++
Sbjct: 5 WEV-IDLKTLRDEPELVRESQRIRGEDPALVDQALEADARRRAAIVEADNLRAEQKSLG- 62
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGED 189
K+ GK + E+ +L+ GK L E + + + + I N+ P GGED
Sbjct: 63 KLVGKADGDEKTELLARGKELAERVKAAVAAQNAAEADSEAAHRAISNVVQ-GAPAGGED 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ +TVG P P KDH +LG++L + D + A+VSGS+FY+L +L++GL+N
Sbjct: 122 DFVLVETVGEPREIADP-KDHLELGESLGLIDMERGAKVSGSRFYFLTGNGALLQLGLLN 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + GF + P +VR V+ GF A+ +VY + D L+GT+E+P+ G
Sbjct: 181 LAARKAVANGFELMIPPVLVRPEVMGGTGFLGAHAD-EVYHLPDDDLYLVGTSEVPLAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H + I+ S P +YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+PEE+++ H
Sbjct: 240 HSNEIIDLSDGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPEEAEAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ L+ E ++ +++ + ++++
Sbjct: 300 QRLLGWEREMLAAIDVPYRVI 320
>gi|260904847|ref|ZP_05913169.1| seryl-tRNA synthetase [Brevibacterium linens BL2]
Length = 426
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 170/320 (53%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID +R+N + A+ R S+ +L + VL + + R ++ + ++++
Sbjct: 2 IDLALLRENPDLFKASQEARGSSVDLVDEVLAADSARRSAITAFEDARADQKSFSSQI-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
K E+ LI GK + L+ + + T + A +PN+ +P GGE+ +
Sbjct: 61 KAPKDEKPALIAAGKEKSAKVKALQAESEEATFAFDKLASKLPNLIVEGIPSGGEENFVT 120
Query: 194 RKTVGNPSVFN---FPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
KTVG P F+ F DH ++G+ L D +V+GS+F+YL LEM L+N
Sbjct: 121 LKTVGEPRDFSSDGFEPADHLEIGETLKAIDTARGTKVAGSRFHYLTGFGAKLEMALLNL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ GF P TP +V+ V+ GF A+ +VY +E D L+GT+E+P+ G+H
Sbjct: 181 ARDVAEEAGFIPTITPTLVKPEVMRGTGFLGEHAD-EVYRLEADDLFLVGTSEVPLAGLH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
MD I+ S PL+YA S C+R EAG+ G TRG+ RVHQF K+EMF + + E +++ HE
Sbjct: 240 MDEIIDLSDGPLRYAGISSCYRREAGSYGKDTRGIIRVHQFQKVEMFAYVEIENAEAEHE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ ++E + L ++++
Sbjct: 300 RMLSLQEKMLGLCELPYRVI 319
>gi|293400049|ref|ZP_06644195.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453207|ref|ZP_09545103.1| serine-tRNA ligase [Eubacterium sp. 3_1_31]
gi|291306449|gb|EFE47692.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964046|gb|EHO81584.1| serine-tRNA ligase [Eubacterium sp. 3_1_31]
Length = 428
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 177/324 (54%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV----DRLREERNAVANK 130
+D K++R+N ++V N++ + LELV ++ E M V +++ D LR +RNA++ +
Sbjct: 2 LDMKFLRENVDSVKENMKKKFQEHKLELVDKVVE-MDKVNRQLKQRGDDLRAKRNAMSKE 60
Query: 131 MKGKLEP---SERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
+ G + E + + + + + + +EE K+ E+++ IPNM P VP+G
Sbjct: 61 IGGLMAKGLKDEANAVKAKVQAMADEMKEIEEKEAKMAAEIKEIMMKIPNMIDPSVPIGK 120
Query: 188 EDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+D + + G P V F + H ++ + + D D+A +V+G+ FYYL + L
Sbjct: 121 DDSENVELQKYGEPIVPAFEIPYHTEIMERFNGIDLDSARKVAGNGFYYLMGDIARLHSA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
+I++ +I+RGFT + P ++RS+VV +Y IEG D LIGT+E +
Sbjct: 181 VISYARDFMIERGFTYVVPPFMIRSNVVTGV-MSFAEMEGMMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+IL E LP Y ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 240 IGKFIDTILDEKDLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESA 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ +L DL+ SL + + L
Sbjct: 300 DWFVKLYTNTVDLFRSLDIPVRTL 323
>gi|260588834|ref|ZP_05854747.1| serine--tRNA ligase [Blautia hansenii DSM 20583]
gi|260540613|gb|EEX21182.1| serine--tRNA ligase [Blautia hansenii DSM 20583]
Length = 428
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 180/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R+N E V NIRN+ + L +V +EL ++ +++EV+ LR ERN ++ +
Sbjct: 2 LDIRFLRENPEVVKQNIRNKFQDNKLPMVDEVIELDKRNREIKQEVEALRAERNKISKMI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEE---DLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G ++ +R++ E K + T+E + ++ ++++ IPN+ P VP+G +
Sbjct: 62 GGLMKEGKREEAEEAKKQVTANAETVERLSAEEKEVEEKIKTIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V ++ + H + ++ + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQKYGEPVVPDYEIPYHADIMESFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSDVVTGVMSFAEMDA--MMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 240 IGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTL 323
>gi|331083503|ref|ZP_08332615.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330404196|gb|EGG83744.1| seryl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 428
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 180/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R+N E V NIRN+ + L +V +EL ++ +++EV+ LR ERN ++ +
Sbjct: 2 LDIRFLRENPEVVKQNIRNKFQDNKLPMVDEVIELDKRNREIKQEVEALRAERNKISKMI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEE---DLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G ++ +R++ E K + T+E + ++ ++++ IPN+ P VP+G +
Sbjct: 62 GGLMKEGKREEAEEAKKQVTANAETVERLSAEEKEVEEKIKTIMMTIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V ++ + H + ++ + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQKYGEPVVPDYEIPYHADIMESFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I RGFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSDVVTGVMSFAEMDA--MMYKIEGEDLYLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 240 IGKFIDTIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEESP 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 300 MWFDKLWQNTVDLFRSLDIPVRTL 323
>gi|254366378|ref|ZP_04982422.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
gi|134151890|gb|EBA43935.1| seryl-tRNA synthetase serS [Mycobacterium tuberculosis str.
Haarlem]
Length = 419
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 168/318 (52%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R+ AV + +R + L + +L V D LR E+ A A+K G
Sbjct: 2 IDLKLLRETPNAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKA-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E D V+ I N+ VP GGED +
Sbjct: 61 GASPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDYAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG PS P KDH +LG++L + D A+VSGS+FY+L +L++GL+ L
Sbjct: 121 LDVVGEPSYLENP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALK 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GF P P +VR V+ GF GA+ + VY +EG L+GT+E+P+ G H
Sbjct: 180 LAVDNGFVPTIPPVLVRPEVMVGTGFL--GAHAEEVYRVEGDGLYLVGTSEVPLAGYHSG 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P +++ HE L
Sbjct: 238 EILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEHEHERL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + + ++++
Sbjct: 298 LGWQRQMLARIEVPYRVI 315
>gi|295660706|ref|XP_002790909.1| seryl-tRNA synthetase synthetase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281161|gb|EEH36727.1| seryl-tRNA synthetase synthetase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 561
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 179/359 (49%), Gaps = 40/359 (11%)
Query: 40 PFRLLARAFSAPALQTIDTTDNKGGVAVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNAN 99
PFR R F + Q T ++ A KP D K IR+N S N +RN +
Sbjct: 25 PFR---RGFFSSHPQLSSNTSSRPPTAPKP----IPDIKHIRENAALYSQNCIDRNYSDL 77
Query: 100 LELVLELYEKMLNVQKEVDRLREER-------NAVANKMKGKLEP----SERQKLIEEGK 148
+ + ++ D LRE +++A M P S+++K EE
Sbjct: 78 AQYPYRIQRLSAESRELQDALREPHRQIKQIESSIAKLMISSRNPDIEESQKRKTEEELS 137
Query: 149 NLKEGLVTLEEDLVKLT-------DELQQEAQCIPNMTHPDVPVGGEDCSI--IRKTVGN 199
+L+ TL++ LT E+++ A +PN+T P P G E I I +
Sbjct: 138 SLRLSAQTLKDKSNHLTTARTNHTKEIERLALSLPNLTSPQTPAGPEPSLINYINYDPTS 197
Query: 200 PSVFNFPVK--DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIK 257
PS P H +G +L++ +F +A+ SG +YYL NEA +LE LI + LS ++
Sbjct: 198 PSTTPLPTHHTSHVTIGTSLNLLNFTSASLTSGWGWYYLTNEAALLEQALIQYALSVALR 257
Query: 258 RGFTPLTTPEIVRSSVVEKCGFQPRGANT--QVYSIEGADQ---------CLIGTAEIPV 306
RG+ ++ P +V S + CGFQPR AN QVY IE +++ CL GTAEIP+
Sbjct: 258 RGWQAISPPSLVYSHIAHACGFQPRDANNEQQVYHIEQSERDVERRRPGRCLAGTAEIPL 317
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
I ++ + LP+K S CFR EAGA G T+GLYRVH+F+K+E+F + P+E+
Sbjct: 318 AAIFAGQEMAANQLPVKVVGVSRCFRAEAGARGADTKGLYRVHEFTKVELFGWAVPDEA 376
>gi|78043693|ref|YP_361479.1| seryl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
gi|123770534|sp|Q3A8Q5.1|SYS_CARHZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|77995808|gb|ABB14707.1| seryl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
Length = 424
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 183/324 (56%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +R N E V ++ R +N NL+ L L E+ + +V++ + +RN V+ ++ G+
Sbjct: 2 LDIKKVRQNPEIVVEALKKRGANLNLDEFLRLDEERRKLLVDVEQKKYKRNTVSEEI-GR 60
Query: 135 LE----PSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
L+ P++ LI E + L + + L++++ ++ ++L IPN+ H VPVG +
Sbjct: 61 LKKQGLPAD--DLILEMRALSDEIKKLDDEVAQIEEKLHAILLTIPNIPHESVPVGKDSS 118
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F F K H+++G+ LDI DF ++V+G++F + K MLE +IN
Sbjct: 119 ENVEVRRWGEPRKFTFTPKAHWEIGEELDILDFARGSKVTGARFTFYKGLGAMLERAVIN 178
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + G+ + P IV + + G P+ A ++ +EG + LI TAE+PV
Sbjct: 179 FMLDLHTREHGYVEVFPPFIVNADSMMGTGQLPKFAE-DMFKLEGLNYYLIPTAEVPVTN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ + IL LP+ + A+S CFR EAGAAG TRGL R HQF+K+E+ F +PE S
Sbjct: 238 LYREEILDGDKLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPENSYEE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLLLF 392
E+L R E + LGL +++++
Sbjct: 298 LEKLTRDAERVLQLLGLPYRVVVL 321
>gi|389576832|ref|ZP_10166860.1| seryl-tRNA synthetase [Eubacterium cellulosolvens 6]
gi|389312317|gb|EIM57250.1| seryl-tRNA synthetase [Eubacterium cellulosolvens 6]
Length = 434
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 178/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVA--- 128
ID K++R+N + V NI+ + + L +V E+ E + + ++ + L+ E+N ++
Sbjct: 2 IDIKFLRENPDVVKENIKKKFQDRKLPMVDEVIEFDKERREILQKKEALQAEKNKISKEI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K+ G+ + E ++ + + + + LEE + +E+++ IPN+ P VP+G +
Sbjct: 62 GKLMGQGKKDEANEVKAKVAEISKEIPALEERGRVVDEEIKKRMMVIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ ++ D D DAA V+G+ FYYL + L +
Sbjct: 122 DSENVEIQKYGEPVVPDFEVPYHTEIMESFDGIDMDAAGRVAGNGFYYLLGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT + P ++RS+VV ++ +Y IEG D LIGT+E +
Sbjct: 182 LSYGRDFMIDRGFTYVIPPYMIRSAVVNGV-MSFDEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D I+ E LP+ ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GRFIDEIIPEQKLPITLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESMD 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++E+L + D + SL + + L
Sbjct: 301 WYEKLWQNTVDFFRSLDVPVRTL 323
>gi|220930544|ref|YP_002507453.1| seryl-tRNA synthetase [Clostridium cellulolyticum H10]
gi|220000872|gb|ACL77473.1| seryl-tRNA synthetase [Clostridium cellulolyticum H10]
Length = 425
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 179/324 (55%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + L LV + L ++ + ++E + LR RN ++ ++
Sbjct: 2 LDLKFVRENPEIVKQNIRNKFQDKKLGLVDEVISLDSELRSAKQEAEALRANRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + +E +++ ++ E L LE +L ++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKAEAEEMKQQVTAQSECLAALEAKENELEEKVKNVLMAIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + L D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQRYGEPVVPDFEVPYHTEIMEKLKGIDLDSARKVAGNGFYYLMGDVARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I +GFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINQGFTYCIPPFMIRSEVVTGVMSFAEMEA--MMYKIEGEDLFLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+
Sbjct: 240 IGKFIDTIIPEASLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDGM 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
++E++ + DL+ SL + + L
Sbjct: 300 IWYEKMWQNTVDLFRSLDIPVRTL 323
>gi|336319306|ref|YP_004599274.1| seryl-tRNA synthetase [[Cellvibrio] gilvus ATCC 13127]
gi|336102887|gb|AEI10706.1| seryl-tRNA synthetase [[Cellvibrio] gilvus ATCC 13127]
Length = 426
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 178/323 (55%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ + V A+ R + A ++ VL+ + + E ++LR E+ A K+
Sbjct: 2 IDLKLLRDDPDVVRASQVTRGDDPALVDEVLDADARRRSALTEFEQLRAEQKAHGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ K++ + + L+ D + + + I N+ VP GGED ++
Sbjct: 61 QAQGEEKQALLAHAKHVADRVKALQADADAAQAKADELLRRIGNVVEDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVF------NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ VG P F +F VKDH +LG+ L D + A+VSG++FY+L LE+ L
Sbjct: 121 LEHVGTPRDFAAEYGADFTVKDHLELGEGLRAIDTERGAKVSGARFYFLTGIGARLELAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+N + + + GFTP+ TP +V+ ++ GF A+ ++Y +E D L+GT+E+ +
Sbjct: 181 LNAAVDKAVGLGFTPVITPTLVKPEIMAGTGFLGAHAD-EIYRLEADDLYLVGTSEVALA 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G H I+ S PL+YA +S C+R EAG+ G TRG+ RVHQF K+E F + + E++
Sbjct: 240 GYHSGEIVDLSDGPLRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEAFSYTRVEDAQD 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
H ++ E+++ L ++++
Sbjct: 300 EHRRILGWEKEMLDLAELPYRVI 322
>gi|170760371|ref|YP_001785350.1| seryl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
gi|238688798|sp|B1L1M0.1|SYS_CLOBM RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|169407360|gb|ACA55771.1| serine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 426
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 179/322 (55%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N + + NR ++ + VL+L E+ N+ +V+ L+ +RN V++++
Sbjct: 2 LDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSEV 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
K K E + ++ E KNL E + + L K+ +++Q IPN+ +P VP G D
Sbjct: 62 PKLKKEGKDVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGETDE 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
I + P+ F+F K H+ +G L+I DF+ A +V+GS+F + K LE LI+
Sbjct: 122 DNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGARLERSLIS 181
Query: 250 WTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L + K G+T + P +V + + G P+ + I D LI TAE+PV
Sbjct: 182 YFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPK-FEEDAFKISEDDYFLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
++ D IL LPLK+ A+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 241 LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L E + LG+ ++++
Sbjct: 301 LEKLTNDAETVLKELGIPYRVV 322
>gi|421837485|ref|ZP_16271652.1| seryl-tRNA synthetase, partial [Clostridium botulinum CFSAN001627]
gi|409740363|gb|EKN40660.1| seryl-tRNA synthetase, partial [Clostridium botulinum CFSAN001627]
Length = 397
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ N++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAKRNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + ++++ E K + + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKEEAEELKKQVTAASDHLAELEKGESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|379718026|ref|YP_005310157.1| SerS protein [Paenibacillus mucilaginosus 3016]
gi|378566698|gb|AFC27008.1| SerS [Paenibacillus mucilaginosus 3016]
Length = 426
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 174/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K +R + + V + NR +N +L+ L + +EV++L+ RN V+ ++
Sbjct: 2 LDVKLLRGDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVSQEVAQ 61
Query: 134 KLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
+ E LIEE K + + + L+E++ L +L +PNM VPVG E+ +
Sbjct: 62 LKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLPNMPQDSVPVGSSEEEN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + VG+ F F K H+++ +ALDI DF+ A +V+GS+F + K LE LIN+
Sbjct: 122 VEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + G+ + P+IV + G P+ A V+ +EG D LI TAE+PV H
Sbjct: 182 MDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAE-DVFKLEGTDYFLIPTAEVPVTNYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP + AFS CFR+EAG+AG TRGL R HQF+K+E+ PE+S+ E
Sbjct: 241 RDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQFNKIELVKLTLPEQSNDELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L +++L
Sbjct: 301 KLTADAEKVLQLLKLPYRVL 320
>gi|254973664|ref|ZP_05270136.1| seryl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091055|ref|ZP_05320533.1| seryl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312709|ref|ZP_05354292.1| seryl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515469|ref|ZP_05383145.1| seryl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648561|ref|ZP_05395463.1| seryl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|260681783|ref|YP_003213068.1| seryl-tRNA synthetase [Clostridium difficile CD196]
gi|260685380|ref|YP_003216513.1| seryl-tRNA synthetase [Clostridium difficile R20291]
gi|306518690|ref|ZP_07405037.1| seryl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359333|ref|YP_006197185.1| seryl-tRNA synthetase [Clostridium difficile BI1]
gi|260207946|emb|CBA60065.1| seryl-tRNA synthetase [Clostridium difficile CD196]
gi|260211396|emb|CBE01468.1| seryl-tRNA synthetase [Clostridium difficile R20291]
Length = 423
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 23/329 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K IR+N + + + R +L+ V+EL K + +EV+ ++ E N + K+
Sbjct: 2 LDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEE--DLVKLTDELQQEAQC--------IPNMTHPDV 183
+LI+EGK++ E L+E D +K DE +E + IPN+ HP+V
Sbjct: 61 --------QLIKEGKDVTEEKTRLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEV 112
Query: 184 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P G D ++ +T G P+ F+F K H+ +G L I DF+ A +++GS+F +
Sbjct: 113 PQGETDEDNVQIRTWGEPTKFDFEYKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGAR 172
Query: 243 LEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGT 301
LE L+N+ L + K G+T + P + + G P+ ++ IEG + LI T
Sbjct: 173 LERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPK-FEEDMFKIEGLEYFLIPT 231
Query: 302 AEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
AE+PV IH + IL + LP+KY A++ CFR+EAG+AG TRGL R HQF+K+E+ F +
Sbjct: 232 AEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVK 291
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
PE+S + E L E + LGL ++++
Sbjct: 292 PEDSYNELESLTHDAETMLQMLGLPYRVV 320
>gi|325846101|ref|ZP_08169195.1| serine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481694|gb|EGC84729.1| serine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 429
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANK- 130
+D K++R+N E V NI+ + + L LV +EL +K+ +V+ E D LR +RN + +
Sbjct: 2 LDIKFVRENPELVKENIKKKFQDEKLVLVDEVIELDQKLRDVKTEGDNLRAKRNKTSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ G+ + E +++ +E ++ + LV +EED K D+L+++ Q IP M VP+G +
Sbjct: 62 GALMGQGKKEEAEEVKKEVGDINDRLVQIEEDTRKFQDQLKEKMQVIPQMIDDSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G ++ V H + ++ + D D+A + SG+ FYYLK + L +
Sbjct: 122 DSENVEIERFGENVTPDYEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I +G+ P ++RS VV +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDKGYEYHIPPFMIRSDVVTGV-MSFAEMEDMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G ++SI ES +PLK ++S CFR E GA G RG+YR+HQF K EM + C+PE+S
Sbjct: 241 GKFINSINEESDMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSKK 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+++EL + + + SL + + L
Sbjct: 301 FYDELWQNTVEFFRSLEIPVRTL 323
>gi|239825598|ref|YP_002948222.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
gi|259511672|sp|C5D340.1|SYS_GEOSW RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|239805891|gb|ACS22956.1| seryl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 424
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 179/321 (55%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R++ E V + R + N++ EL +K + + + L+ +RN V+ ++
Sbjct: 2 LDVKYLRNHFEEVKEKLLKRGEDLTNIDRFEELDKKRRELIAKAEELKNKRNEVSQQIAV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDC 190
K E + LI E +++ + + T+++++ ++ +EL IPN+ H VPVG ED
Sbjct: 62 LKREKKDADHLIAEMRDVGDRIKTMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEEDN 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
+RK G P F+F K H+ + + L I DF+ AA+V+GS+F + K LE LIN+
Sbjct: 122 VEVRKW-GEPRSFSFEPKPHWDIAEQLGILDFERAAKVTGSRFVFYKGLGARLERALINF 180
Query: 251 TLSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
L I+ G+ + P +V + + G P+ + IE D LI TAE+PV +
Sbjct: 181 MLDVHIEEFGYQEILPPYLVNRASMTGTGQLPK-FEEDAFRIETDDYFLIPTAEVPVTNL 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D ILS LP+ Y A+S CFR EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 240 HRDEILSAEDLPIYYVAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYDEL 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
E+L E + LGL ++++
Sbjct: 300 EKLTNQAERILQLLGLPYRVV 320
>gi|168177860|ref|ZP_02612524.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182670409|gb|EDT82383.1| seryl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 425
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 180/323 (55%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIR + + LELV + L ++ N++ E D LR +RN ++ ++
Sbjct: 2 LDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDTELRNIKPEADNLRAKRNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + ++++ E K + + L LE+ +L +++++ IPN+ P VP+G +
Sbjct: 62 GGLMAQGKKEEAEELKKQVTAASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ + + D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEIQRYGEPVVPDFEIPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS VV ++ +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCIPPFMIRSEVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D+I E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 241 GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNTVDFFRSLDIPVRTL 323
>gi|126178761|ref|YP_001046726.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|166222743|sp|A3CTP4.1|SYS_METMJ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|125861555|gb|ABN56744.1| seryl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 425
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 175/321 (54%), Gaps = 6/321 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL---ELVLELYEKMLNVQKEVDRLREERNAVANKM 131
++ K++R + E V A++ R L + VLE+ + + + LR RN ++ ++
Sbjct: 2 LELKFVRAHPEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISREI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+ + ++ +L+ E L E + +E + LT+ ++ +PN+ H VPVG +D
Sbjct: 62 SQARKAGNDITELLAEAAGLPERIKEVETERETLTEAVRYRLMRLPNILHESVPVGKDDS 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P + F +++H L DF+ AA+++GS FY+LK +L+M L
Sbjct: 122 ENVEIRRWGEPEIPAFDLENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLDMALQR 181
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + +++ G+TP+ P ++ + E N +Y I+G D+ LI T+E P+ +
Sbjct: 182 FAMDILVEHGYTPIIPPYMMNRAAYEGVTDLADFENV-MYRIDGEDEYLIATSEHPMAAM 240
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
+ D I E LPL+ A S CFR E GA G T+GL+RVHQF K+E F++ PE+S H
Sbjct: 241 YCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQSWDLH 300
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
EEL+ E+++ LGL ++++
Sbjct: 301 EELMANAEEVFQRLGLPYRIV 321
>gi|89897924|ref|YP_515034.1| seryl-tRNA synthetase [Chlamydophila felis Fe/C-56]
gi|123483891|sp|Q255Z9.1|SYS_CHLFF RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|89331296|dbj|BAE80889.1| seryl tRNA synthetase [Chlamydophila felis Fe/C-56]
Length = 426
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 174/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR E +R ++ + +L +L L +++ ++ + + L+ ++ ++ ++ +
Sbjct: 2 LDIKLIRKAPEECETRLRKKDPSISLLPILNLDKEVRQLKTDSESLQSQKKLLSRQIHQT 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K + +I E + + + L LE L + LQ +PN DVP+ + +
Sbjct: 62 KARNEDASDMIGEVERISQELTRLEALLEEKDAALQNLLVRLPNYPDEDVPISPDKTGNR 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ K+VG+PS F+FP K H +L + L I DF + SGS + KN V+LE L+ + L
Sbjct: 122 VIKSVGSPSTFSFPPKHHLELNQKLQILDFKLPGKTSGSGWPAYKNRGVLLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
+ GF P +V+ ++ G P+ + Q Y +E DQ L I TAE+ + G H
Sbjct: 182 QKQQSHGFQLWLPPLLVKREILFGSGQIPK-FDGQYYRVEDGDQSLYLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
I +E LP+ YAA + CFR EAGAAG RGL RVHQF K+EMF F PE++D +E
Sbjct: 241 SQEIFNEKDLPIYYAACTPCFRREAGAAGAHERGLVRVHQFHKVEMFAFTTPEQADQAYE 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
+++ I E++ + L L ++L L
Sbjct: 301 KMLSIVEEILTELKLPYRLSLL 322
>gi|374339140|ref|YP_005095876.1| seryl-tRNA synthetase [Marinitoga piezophila KA3]
gi|372100674|gb|AEX84578.1| seryl-tRNA synthetase [Marinitoga piezophila KA3]
Length = 425
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 179/325 (55%), Gaps = 13/325 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVAN---- 129
ID K IR + E + + RN +L + EL E+ Q+EV+ LR ERN +
Sbjct: 2 IDIKLIRRSPEIIIEALEKRNHETDLINRIRELDEEKREYQREVEALRAERNTYSKQLAK 61
Query: 130 -KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
K +GK+E E ++L ++ K + + + LE + ++ D++ + IPN+ VPVG +
Sbjct: 62 LKAEGKME--EFEELSKKSKRIADKIKELESKMNEIEDKIHIKLLYIPNIPDESVPVGKD 119
Query: 189 --DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D IRK G P+ F+F K H+ LG L + DF+ A+++SGS+F +K++ L
Sbjct: 120 EKDNVEIRKW-GTPTTFDFKPKAHWDLGPDLKMLDFERASKLSGSRFSIIKSQLARLNRA 178
Query: 247 LINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIP 305
LIN+ L + G+T + P +V+ + G P+ Y+ + D LI TAE+
Sbjct: 179 LINFMLDVHTQQHGYTEIVPPHLVKRDTMLGTGQLPK-FEEDAYNTKDDDLFLIPTAEVA 237
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G+H + ILS LPLKY A++ C+R EAG+ G RG+ R HQF K+E+F + +PE+S
Sbjct: 238 LAGMHQNEILSFKELPLKYVAYTPCYRREAGSYGKDVRGMIRQHQFDKVELFWYSEPEKS 297
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
+ EEL E + L L ++++
Sbjct: 298 EEALEELTSHAEKILQLLKLPYRVI 322
>gi|227499894|ref|ZP_03929987.1| serine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
gi|227218003|gb|EEI83276.1| serine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
Length = 451
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 18/341 (5%)
Query: 67 VKPQWKA----------AIDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNV 113
++P W ID K +R+N E V NI+ + L+LV LEL EK+
Sbjct: 6 LRPNWAGLFLLEKGEIIMIDIKLLRENPELVKENIKKKFQEEKLKLVDEVLELDEKLRAF 65
Query: 114 QKEVDRLREERNAVANK---MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQ 170
+ E D LR +RN + + + G+ + ++ + K + + L+ +E + + E+++
Sbjct: 66 KTEGDNLRSQRNKTSKEIGALMGQGKKEAAEEAKKLVKEINDKLLHIESETEEFAKEVKK 125
Query: 171 EAQCIPNMTHPDVPVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVS 229
Q IP + VP+G +D + + G P V ++ + H + ++ D D DAA E S
Sbjct: 126 RMQVIPQIIDDTVPIGKDDTENVEIEKYGEPLVPDYEIPYHIDIMESFDGVDLDAARETS 185
Query: 230 GSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVY 289
G+ FYYL+ + L ++++ +I RG+T P ++RS VV +Y
Sbjct: 186 GAGFYYLRGDIARLHSAILSYARDFMIDRGYTYYIPPFMIRSDVVTGV-MSFSEMEDMMY 244
Query: 290 SIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVH 349
IEG D LIGT+E + G +++I E +PLK ++S CFR E GA G RG+YR+H
Sbjct: 245 KIEGEDLYLIGTSEHSMIGKFINTITEEEKMPLKMTSYSPCFRKEVGAHGIEERGVYRIH 304
Query: 350 QFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
QF K EM + C+PE+S + + EL + D + SL + + L
Sbjct: 305 QFEKQEMVIICKPEDSKTLYNELWKNTVDFFRSLEIPVRTL 345
>gi|225575633|ref|ZP_03784243.1| hypothetical protein RUMHYD_03726 [Blautia hydrogenotrophica DSM
10507]
gi|225037143|gb|EEG47389.1| serine--tRNA ligase [Blautia hydrogenotrophica DSM 10507]
Length = 428
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 180/326 (55%), Gaps = 14/326 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+N+ ++ L LV LEL ++ +++EV+ LR +RN ++ ++
Sbjct: 2 LDIKFVRENPELVKQNIKNKFQDSKLPLVDEVLELDKQNREIKQEVEALRAQRNKISKQI 61
Query: 132 KGKLEPSERQKL------IEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV 185
+ ++++ + E N E L T E+++ ++L + IPN+ P VP+
Sbjct: 62 GALMGQGKKEEAEEVKKQVAESGNRIEELSTKEKEV---EEKLLRNMMVIPNIIDPSVPI 118
Query: 186 GGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
G +D + + G P V F + H ++ ++ D D+A V+G+ FYYL + L
Sbjct: 119 GKDDSENVEVEKFGEPIVPEFEIPYHTEIMESFQGIDLDSARRVAGNGFYYLMGDIARLH 178
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 179 SAVISYARDFMIDRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEH 237
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G +D+I+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PEE
Sbjct: 238 SMIGKFIDTIIPENTLPQTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCKPEE 297
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S + ++L + DL+ SL + + L
Sbjct: 298 SPMWFDKLWQNTVDLFRSLDIPVRTL 323
>gi|298253331|ref|ZP_06977123.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532726|gb|EFH71612.1| seryl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 428
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + K T + + N+ + P GGED ++
Sbjct: 61 TASAEEKAALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|402547845|ref|ZP_10844710.1| serine--tRNA ligase [Campylobacter sp. FOBRC14]
gi|401015872|gb|EJP74649.1| serine--tRNA ligase [Campylobacter sp. FOBRC14]
Length = 414
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 182/327 (55%), Gaps = 7/327 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
I+ K + N E + +R +N+N + L+ +L+ + ++ ++ ++ + +NA + ++ G
Sbjct: 2 INLKLLESNYENFVSKLRGKNTNEDVLKSLLDTFNELKKQRQILENFQAVQNAKSKEL-G 60
Query: 134 KLEPS--ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L S + L EE KE L E + L ++L A +PN+T DVP+G E+
Sbjct: 61 ALTRSGGDVTDLKEELSKNKEALSAQNEIVRVLEEKLDNIASNVPNITDDDVPLGRDEED 120
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K H++LG+ L DF+ A++SGS+F L+ EA L L+N+
Sbjct: 121 NVCIKKVLNPREFSFTPKAHYELGEQLGWLDFERGAKISGSRFTILRGEAARLSRALVNY 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V S+ + G P+ + +Y + D LI T+E+PV I+
Sbjct: 181 MIDFNSARGFELVNVPFLVNSNTLYGTGQLPKFED-DLYKVRDEDLYLIPTSEVPVTNIY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ +LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+S+ +
Sbjct: 240 NDEIIDAEILPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSITKPEQSEQILD 299
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL +SLGL H +LL +L
Sbjct: 300 EMVACASDLLTSLGLPHRHMLLCSGDL 326
>gi|253581104|ref|ZP_04858364.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847640|gb|EES75610.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 430
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NIRN+ + LELV LEL ++ +++EV+ LR ERN ++ ++
Sbjct: 2 LDIKFVRENPEVVKQNIRNKFQDNKLELVDKVLELDKENREIKQEVEALRAERNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQ---EAQCIPNMTHPDVPVGGE 188
+ ++++ E K + +EE + + ++ + IPN+ P VP+G +
Sbjct: 62 GALMAQGKKEEAEEVKKQVAASGTRIEELSTREKEVEEELLKDMMVIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H ++ + D D D+A V+G+ FYYL + L +
Sbjct: 122 DSENVEIEKFGEPVVPDFEVPYHTEIMENFDGIDLDSARRVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGLEERGVYRIHQFEKQEMIVVCRPEESPM 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
+ ++L + DL+ SL + + L
Sbjct: 301 WFDKLWQNTVDLFRSLDIPVRTL 323
>gi|365843258|ref|ZP_09384201.1| serine--tRNA ligase [Flavonifractor plautii ATCC 29863]
gi|364572742|gb|EHM50279.1| serine--tRNA ligase [Flavonifractor plautii ATCC 29863]
Length = 433
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 173/328 (52%), Gaps = 13/328 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K+IR+N +AV NI+ + L LV LEL + +E LR RNA + ++
Sbjct: 2 LDIKFIRENPDAVKENIKKKFQEQKLPLVDQVLELDAENRRTIQEAQELRTARNAKSKQV 61
Query: 132 -----KGKLEPS---ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDV 183
+ K +PS E + L E K + L LE +L E+++ IPN+ P V
Sbjct: 62 GVLMGQSKKDPSKLAEAEALKAEVKADADRLAFLEGRETELAAEIRRILLQIPNIIDPSV 121
Query: 184 PVGGED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P+G +D C++ + G + F + H Q+ ++ D D DAA VSG+ FYYL +
Sbjct: 122 PIGPDDSCNVEVQRFGEAATPAFEIPYHTQIMESFDGIDMDAAGRVSGAGFYYLMGDIAR 181
Query: 243 LEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTA 302
L ++ + +I +GFT P ++ +VVE Q + +Y IEG D LIGT+
Sbjct: 182 LHEAVLAYARDFMIDKGFTFCIPPFMIHGNVVEGVMSQTE-MDAMMYKIEGEDLYLIGTS 240
Query: 303 EIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP 362
E + G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+P
Sbjct: 241 EHSMIGKFIDQIIPEDKLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCRP 300
Query: 363 EESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES ++E++ R +L+ SL + + L
Sbjct: 301 EESMDWYEKMWRWSVELFRSLDIPVRQL 328
>gi|338732440|ref|YP_004670913.1| seryl-tRNA synthetase [Simkania negevensis Z]
gi|336481823|emb|CCB88422.1| seryl-tRNA synthetase [Simkania negevensis Z]
Length = 432
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 176/324 (54%), Gaps = 5/324 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K IR++ + + A ++ ++ ++ +L+L E++ ++ +V++L+ ++N A ++ K
Sbjct: 11 LDIKLIRNDPKGIEAKLKTKDPAVSIAPILKLDEEIRQIKNQVEQLKNQKNQNAKQIGEK 70
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
E KL+EE + + + L+ L++L C PN+ D+ + ++
Sbjct: 71 KRKGEDVSKLMEEIAGVGDEIQKLDHQLMELEKAFHDHVACFPNLPMEDIKNSLDPADNV 130
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
KT G F+F K+H +L + L +FDF A++ G+ + + LE LI + +
Sbjct: 131 CIKTFGEKPSFSFEPKNHMELNEKLKLFDFKRGAKIGGTGWPCYRGLGARLEWALIQFMI 190
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVGGIH 310
I GF P + R ++ P+ + Q+Y + D LI T+E + G+H
Sbjct: 191 DTHITNGFEMWIPPLVGRPEIMYGSAHLPKFED-QLYKVHDDDYHLYLIPTSEAVLNGLH 249
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL E LP KY AF+ CFR EAGAAG+ RGL R HQF+K+EMF +PEES++ +E
Sbjct: 250 FDEILEEESLPRKYTAFTPCFRREAGAAGSQERGLIRTHQFNKVEMFCVTRPEESEAIYE 309
Query: 371 ELIRIEEDLYSSLGLHFKLLLFLA 394
E+++ E++ +L +H++ +L +
Sbjct: 310 EMLKSAEEILQALNVHYRSMLLVT 333
>gi|415727320|ref|ZP_11471418.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
gi|388062217|gb|EIK84835.1| seryl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
Length = 428
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 174/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRNDDLRRDALKAFEAARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + + K T + + N+ + P GGED ++
Sbjct: 61 SAPAEEKAALIAETKELAQKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|57899338|dbj|BAD87949.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|57900428|dbj|BAD87664.1| putative seryl-tRNA synthetase [Oryza sativa Japonica Group]
gi|215697599|dbj|BAG91593.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 400
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 178/306 (58%), Gaps = 11/306 (3%)
Query: 94 RNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM-KGKLEPSERQKLIEEGKN 149
RN +A++ELV E L ++ Q E+D++R+E N + ++ K K + + LI+ +
Sbjct: 23 RNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTSKEIGKLKAKKEDASALIQSTEE 82
Query: 150 LKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS-IIRKTVGNPSVFNFPVK 208
+K+ L E ++ + L + I N+ H VPV ++ + +I +T G + +K
Sbjct: 83 IKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPVSDDEANNLIVRTWGERRL-EGNLK 141
Query: 209 DHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEI 268
+H L K LDI + A+V+G + YYLK+E V+L + LIN+ L+ + KRGF P+ TP
Sbjct: 142 NHVDLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLALINFGLAFLRKRGFKPMQTPFF 201
Query: 269 VRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAA 326
+R + KC Q + ++Y + +G ++ LI T+E P+ H+ + + LP++YA
Sbjct: 202 MRKETMGKCA-QLAQFDEELYKLTGDGEEKYLIATSEQPLCAYHLGDRIYPAELPIRYAG 260
Query: 327 FSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY--HEELIRIEEDLYSSLG 384
+S CFR EAG+ G T G++RVHQF K+E F P +++S+ HEE+I+ ED Y +G
Sbjct: 261 YSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNESWEMHEEMIKNSEDFYKEIG 320
Query: 385 LHFKLL 390
L ++L+
Sbjct: 321 LPYQLV 326
>gi|401563896|ref|ZP_10804827.1| serine--tRNA ligase [Selenomonas sp. FOBRC6]
gi|400189365|gb|EJO23463.1| serine--tRNA ligase [Selenomonas sp. FOBRC6]
Length = 423
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 175/320 (54%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N AV ++NR ++ +L L E + ++V+ + RNAV+ ++ +
Sbjct: 2 LDMKFVRENLPAVQEMLKNRCNSLDLSSFTALEESRRTILQDVEEKKARRNAVSKEIGVR 61
Query: 135 LEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ E ++ E + L + + L+EDL ++ +L+ IPNM DVP+G +D
Sbjct: 62 KKAGESADDVVAEMRALGDEITALDEDLREVEAKLRDLLLQIPNMPKADVPIGKDDTENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+R+ G P F+F + H+ +G+ L + D + AA+V+G++F + K LE IN+
Sbjct: 122 EVRRW-GTPRTFDFEPQAHWDIGEKLGVLDAERAAKVTGARFTFYKGLGARLERACINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+T + P IV + + G P+ A ++ +EG D L+ TAE+P H
Sbjct: 181 MDLHAEKHGYTEMLAPYIVNADSMVGTGQLPKFA-ADMFKLEGLDYYLVPTAEVPTTNYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LP Y +++ CFR EAG+AG TRGL R HQF+K+E+ F PE S E
Sbjct: 240 RDEILDAEQLPEYYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFVTPETSWDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ ED+ +L L ++++
Sbjct: 300 TMVEAAEDVLKTLELPYRVV 319
>gi|270291145|ref|ZP_06197368.1| seryl-tRNA synthetase [Pediococcus acidilactici 7_4]
gi|270280541|gb|EFA26376.1| seryl-tRNA synthetase [Pediococcus acidilactici 7_4]
Length = 426
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 180/323 (55%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV----DRLREERNAVANK 130
+D K IR++ + V + R E + +L K N ++E+ + L++ RN V+++
Sbjct: 2 LDLKMIRNHTDEVKEKLATRGVQP--ETIDQLLAKD-NQRRELIVKSESLKKVRNDVSDQ 58
Query: 131 M-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GE 188
+ + K + + I++ + + + + L+E L K+ E++ +A +PN+ HPDVPV E
Sbjct: 59 ISQMKRNHEDANEPIQKMRKVSQEIKELDEQLEKVAAEVEDQAAHLPNLPHPDVPVSLTE 118
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ S+ + G P F+F K H+++G+AL I DF+ AA+V+GS+F Y + LE +
Sbjct: 119 EGSVELRKFGTPRKFDFKPKAHWEIGEALGILDFERAAKVAGSRFVYYVGDGARLERAVY 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVG 307
N+ L + + GFT TP +V + + G P+ T Y I+ LI TAE+P+
Sbjct: 179 NFFLDQNVAAGFTEEITPYMVNDASMYGTGQFPKFKETHAGYEIKDEQLTLIPTAEVPLV 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ D IL E LP+ A S FR+EAG+AG TRGL R+HQF+K+EM +PE+S
Sbjct: 239 NFYRDEILDEDQLPINVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKITKPEDSWQ 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L R E L LGL + ++
Sbjct: 299 ELEKLTRHAETLLQKLGLPYHVI 321
>gi|429759022|ref|ZP_19291528.1| serine--tRNA ligase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429172394|gb|EKY13962.1| serine--tRNA ligase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 426
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 170/321 (52%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID + +R+N E A+ R R ++ L + +LE + + LR + V +K G
Sbjct: 2 IDVRSLRENPEPARASQRARGADPALVDQILEADVARREALQNFEALRATQKEV-SKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ ER ++ + K L E + E E + A+ +PN+ VPVGGED ++
Sbjct: 61 RASKEERPAILAQAKELAEEVKAAEAAANAADAEADRLARLLPNLVLDGVPVGGEDDYVV 120
Query: 194 RKTVG----NPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ G + + F +DH LG+ LD D A+VSG++FYYLK LE+ L+
Sbjct: 121 LRHAGPERRDFAAEGFEPQDHLALGEGLDAIDTKRGAKVSGARFYYLKGIGARLELALMT 180
Query: 250 WTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGI 309
+ + + GF P+ TP +V V+ GF + ++Y + D L GT+E+ + G
Sbjct: 181 MAMDQALANGFVPMMTPTLVTPQVMGGTGFLNEHSE-EIYYLPADDLYLTGTSEVALAGY 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S P +Y +S C+R EAG+AG TRG+ RVHQF+K EMF +C+PE+++ H
Sbjct: 240 HADEILDLSDGPKRYMGWSTCYRREAGSAGKDTRGIIRVHQFNKAEMFSYCRPEDAEEEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
+ EE++ + + L ++++
Sbjct: 300 ARFLAWEEEMLAKVELPYRVI 320
>gi|283782854|ref|YP_003373608.1| serine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283442193|gb|ADB14659.1| serine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 428
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRSDDLRRTALKAFEEARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + K T + + N+ + P GGED ++
Sbjct: 61 TASAEEKAALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|57641075|ref|YP_183553.1| seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|67461627|sp|Q5JE75.1|SYS_PYRKO RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|57159399|dbj|BAD85329.1| Seryl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 455
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 191/349 (54%), Gaps = 42/349 (12%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVA--- 128
+D K IR+N E V ++ R L+ + LEL +K K++++LR+ERN +A
Sbjct: 2 LDIKLIRENPEIVKRDLIKRGETEKLKWIDEILELDKKWRENLKKINQLRKERNQLAVQI 61
Query: 129 NKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-- 186
K K EP + L++ + + + LE++ +L ++ +PN+TH VPVG
Sbjct: 62 GKRKKAGEPID--DLLKRSNEIVKQIEELEKENEELKKKIDYYLWRLPNITHESVPVGES 119
Query: 187 GEDCSIIR-----------------KTVGNPS--VFNFPVKDHFQLGKALDIFDFDAAAE 227
ED IR +++G V ++ + H + + L D + AA+
Sbjct: 120 DEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYEVLSWRPRLHVDMLELLRGADLERAAK 179
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT- 286
VSG++FYYL NE V+L++ LI + L ++I++GFTP+ P +VR V E GA T
Sbjct: 180 VSGARFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEE-------GATTF 232
Query: 287 -----QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
+Y +EG D LI TAE P+ G+H + IL LPL Y S CFR EAG AG
Sbjct: 233 DDFEDVIYKVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKD 292
Query: 342 TRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
T+G++RVHQF K+E FV+ +PEES +HE +I E+++ +L + ++++
Sbjct: 293 TKGIFRVHQFHKVEQFVYSRPEESWEWHERIIANAEEIFQALEIPYRVV 341
>gi|410656651|ref|YP_006909022.1| Seryl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410659629|ref|YP_006912000.1| Seryl-tRNA synthetase [Dehalobacter sp. CF]
gi|409019006|gb|AFV01037.1| Seryl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409021985|gb|AFV04015.1| Seryl-tRNA synthetase [Dehalobacter sp. CF]
Length = 421
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 172/318 (54%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N E V + R ++ NL+ L EK + E + L+ ERN V+ ++ +
Sbjct: 2 LDLKFVRSNPEIVKEALAKRCADINLDDFLRQEEKRRQILFEAENLKAERNKVSEEVARR 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + ++LI + + + + + TL++ L ++ ++ + IPN+ VPVG E+ +I
Sbjct: 62 KKSGQDAEELILQMREVGQNIKTLDDSLNEIEQKMLEVLYLIPNIPDASVPVGKDENDNI 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F F H++LG+ LDI DF A +V+G++F + K LE LIN+ +
Sbjct: 122 QVRKWGKPRKFEFQPLAHYELGEKLDILDFARAGKVTGTRFTFYKGLGARLERALINFMM 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+G+T + P +V + G P+ + +E D LI TAE+PV I+ D
Sbjct: 182 DRHAAKGYTEVFPPFMVNRQSMFSTGQLPK-FEEDAFKVEKTDYFLIPTAEVPVTNIYRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL +LP+K+ A+S CFR EAGA+G TRGL R HQF+K+E+ F PE S E L
Sbjct: 241 EILEADMLPIKFCAYSACFRAEAGASGRDTRGLIRQHQFNKVELVKFSFPENSFQELEML 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
E + L L ++++
Sbjct: 301 TADAEAILQELELSYRVI 318
>gi|313112589|ref|ZP_07798248.1| seryl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310625085|gb|EFQ08381.1| seryl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 443
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 178/334 (53%), Gaps = 19/334 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQ---KEVDRLREERNAVAN-- 129
+D K++R+N +AV NI+ + +A L LV E+ EK + KEV+ L+ RN ++
Sbjct: 2 LDIKFVRENPDAVKENIKKKFQDAKLPLVDEVIEKDAKYRACLKEVEALKAARNKLSKAN 61
Query: 130 --------KMKGKLEPSERQKLIEEG----KNLKEGLVTLEEDLVKLTDELQQEAQCIPN 177
K + + +E Q I+ K + + LE++ L+ +Q+ IP
Sbjct: 62 GPLFGQLKKCTDEAQKAELQAQIDANNAAVKADADKMAELEKEEETLSARIQEIMYTIPQ 121
Query: 178 MTHPDVPVGGEDC-SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYL 236
M P VP+G +D ++ + G P V +FP+ H ++ ++ D D DAA V+G+ FYYL
Sbjct: 122 MIDPSVPIGPDDTYNVEAQRFGEPVVPDFPIPYHTEIMESFDGIDMDAAGRVAGNGFYYL 181
Query: 237 KNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ 296
L ++ + +I +GFT + P ++ +VV+ P + +Y IEG D
Sbjct: 182 LGNIARLHEAVLAYARDFMINKGFTYVIPPFMMHGNVVQGVMSFPE-MDAMMYKIEGEDL 240
Query: 297 CLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEM 356
LIGT+E + G +D L E+ LPL ++S CFR E GA G RG+YR+HQF K EM
Sbjct: 241 YLIGTSEHTMIGRFIDQTLDEATLPLTLTSYSPCFRKEKGAHGIEERGIYRIHQFEKQEM 300
Query: 357 FVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
V C+P+ES ++E+L + +L+ S+ + + L
Sbjct: 301 IVVCRPDESADWYEKLWKNSVELFRSMEIPVRQL 334
>gi|227892467|ref|ZP_04010272.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
gi|385839974|ref|YP_005863298.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase)
(Serine--tRNA ligase) (SerRS) [Lactobacillus salivarius
CECT 5713]
gi|417809217|ref|ZP_12455899.1| seryl-tRNA synthetase [Lactobacillus salivarius GJ-24]
gi|418960610|ref|ZP_13512497.1| seryl-tRNA synthetase [Lactobacillus salivarius SMXD51]
gi|227865760|gb|EEJ73181.1| seryl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
gi|300214095|gb|ADJ78511.1| Seryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase)
(Serine--tRNA ligase) (SerRS) [Lactobacillus salivarius
CECT 5713]
gi|335351173|gb|EGM52667.1| seryl-tRNA synthetase [Lactobacillus salivarius GJ-24]
gi|380344277|gb|EIA32623.1| seryl-tRNA synthetase [Lactobacillus salivarius SMXD51]
Length = 425
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 180/324 (55%), Gaps = 14/324 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL--ELVLELYEKMLNVQKEVDRLREERN----AVA 128
+D K IR N E + R ELV E +K + E + L++ERN A+A
Sbjct: 2 LDIKDIRLNTEEYKRRLGTRGVKPEEIDELVAED-KKRRELLVETENLKKERNEVSEAIA 60
Query: 129 NKMKGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG- 186
+ K + SE+ Q + + G +KE L+E L K+ + ++ A +PN+ +P +PVG
Sbjct: 61 QAKRNKEDASEQIQAMRKVGTKIKE----LDEKLAKVEENVKSMAAHLPNLPNPTIPVGP 116
Query: 187 GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
ED ++ VG P F+F K H+ +G+ L I DFD AA+VSG++F + K LE
Sbjct: 117 DEDSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSGARFVFYKGLGAKLERA 176
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
+ N+ L E K G+T + P IV++ + G P+ + QVY + G D LI TAE+P+
Sbjct: 177 VYNFMLDEHAKEGYTEVIPPYIVKAKSMYGTGQFPKFKD-QVYQVNGEDMTLIPTAEVPL 235
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
+ + ++ LP+ + A S FR+EAG+AG TRGL R+HQF+K+EM + +PE+S
Sbjct: 236 TNYYREEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSY 295
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+ E++ + ++ LGL + ++
Sbjct: 296 NELEKMTKNAGNIMEKLGLPYHVI 319
>gi|333372863|ref|ZP_08464784.1| serine--tRNA ligase [Desmospora sp. 8437]
gi|332971217|gb|EGK10180.1| serine--tRNA ligase [Desmospora sp. 8437]
Length = 432
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 178/328 (54%), Gaps = 7/328 (2%)
Query: 70 QWKAAIDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVA 128
+++ +D K +R + E V + +R + + L+ V+ L E+ + +E ++L+ RN V+
Sbjct: 3 RFQVMLDLKVLRQDLEQVRKRLEHRGEDISGLDSVIRLDERRRELLRETEQLKNRRNVVS 62
Query: 129 NKMKGKLEPSERQ-KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
++ K + E I E + + + + L+E++ ++ EL +PN+ H VPVG
Sbjct: 63 KEVAQKKKAGEEAADTIAEMRRVGDRIKELDEEVRQVERELDHVLLTLPNLPHESVPVGE 122
Query: 188 --EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEM 245
ED +R G ++F K H++L LDI DF+ AA+V+GS+F + K LE
Sbjct: 123 SEEDNQPVRHW-GEVPRWSFEPKPHWELATELDILDFERAAKVTGSRFVFYKGAGARLER 181
Query: 246 GLINWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
L N+ L K G+T + P +V + G P+ A +++ D LI TAE+
Sbjct: 182 ALFNYMLDLHTEKNGYTEMIPPYMVNRDSMTGTGQLPKFAEDS-FAVADTDYYLIPTAEV 240
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
PV H ILS + LP+KYA FS FR+EAG+AG TRGL R HQF+K+E+ +PE+
Sbjct: 241 PVTNFHRGEILSAAELPVKYAGFSANFRSEAGSAGRDTRGLIRTHQFNKVELVKLVKPED 300
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLLLF 392
S E L++ E + LGL +++LL
Sbjct: 301 SYDELESLVQDAEMVLQQLGLPYRVLLM 328
>gi|366163632|ref|ZP_09463387.1| seryl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 423
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 176/319 (55%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMK-G 133
+D K IR N + + + R + ++ +L L EK + EV++L+ ++N+ + +
Sbjct: 2 LDIKLIRSNPDILKKALLKRKDSFDVNQILSLDEKRRQILVEVEQLKNKQNSDSKMVPIY 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCSI 192
K E + L+EE KNL + + TL+ + + DEL + IPN+ + VP G +D ++
Sbjct: 62 KKEGKDVAPLMEEMKNLSDKIKTLDYQVKDIDDELVKILLTIPNIPNSTVPDGDTDDDNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P FNF K H+ +G+ L I DF AAA+V+G++F + K LE L+N+ L
Sbjct: 122 EIRKWGEPKKFNFEPKAHWDIGEKLGILDFSAAAKVTGARFTFYKGLGARLERSLMNFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
K G+T + P +V + + G P+ + + D LI TAE+PV ++
Sbjct: 182 DLHTGKHGYTEVFPPFMVHRNSMIGTGQLPK-FEEDAFKVANNDYFLIPTAEVPVTNMYR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL LP+K+AA+S CFR EAGAAG TRGL R HQF+K+E+ F PE S E
Sbjct: 241 EQILDAKELPIKHAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEELEA 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L R E++ LG+ ++++
Sbjct: 301 LTRDAEEVLQILGIPYRVV 319
>gi|351695241|gb|EHA98159.1| Seryl-tRNA synthetase, mitochondrial [Heterocephalus glaber]
Length = 556
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 148/255 (58%), Gaps = 6/255 (2%)
Query: 141 QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVGNP 200
+ L G+ +++ LV L +L ++ +A +PN THPDVP G E + + + VG
Sbjct: 174 KALRTRGREIRKQLVLLYPREDQLEEQFYLQALKLPNQTHPDVPAGDESQARVLQVVGEK 233
Query: 201 SVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGF 260
F+F + H ++G+ LDI + VSG + YYL+ +L+ L+++TLS+++ RGF
Sbjct: 234 PAFSFQPRGHVEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHSLVSFTLSKLVGRGF 293
Query: 261 TPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGA---DQCLIGTAEIPVGGIHMDSILSE 317
TP+T P+++R +V E CG P + + VYSI+ + D L GT E+ + G MD ++
Sbjct: 294 TPMTVPDLLRGAVFEGCGMTPNASPSHVYSIDPSHFEDLHLAGTGEVGLAGYFMDHSVAF 353
Query: 318 SLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQP--EESDSYHEELIRI 375
LP++ S C+R E G RGLYRVH F+K+EMF P E+S +E + +
Sbjct: 354 RDLPVRMVCSSTCYRAETD-TGREPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLKEFLSL 412
Query: 376 EEDLYSSLGLHFKLL 390
+ ++ + LGLHF++L
Sbjct: 413 QVEILTELGLHFRVL 427
>gi|222823544|ref|YP_002575118.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
gi|254783014|sp|B9KFN2.1|SYS_CAMLR RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|222538766|gb|ACM63867.1| seryl-tRNA synthetase [Campylobacter lari RM2100]
Length = 411
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 180/325 (55%), Gaps = 7/325 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + ++ ++ + + NL + EL + +N++KE L EE A NK +
Sbjct: 2 LDLKLLQNNFDEIAQKLKAKKVDENL--LKELSDLFINLKKE-KALLEEFQAFQNKFSKE 58
Query: 135 LEPSE-RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
L ++ ++ L + KE + + + +L ++L Q A IPN VP G ED ++
Sbjct: 59 LATAQDKESLKAQLSQNKEKINAQSKIVNELEEKLGQIALAIPNTPDDCVPFGEDEDENV 118
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
K V P F+F +K+H LG+ L+ DF ++S S+F LKNE +L L+N+ +
Sbjct: 119 ELKKVLTPPSFDFEIKEHHDLGEKLNWLDFTRGVKISQSRFCVLKNEGALLSRALVNYMI 178
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
RGF + P +V + + G P+ + +Y +E D LI T+EIPV ++ +
Sbjct: 179 DFNRSRGFELVNVPFLVNGATMYGTGQLPKFKD-DMYKVENDDLYLISTSEIPVTNLYSN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL++ LPLK +S CFR EAG+AG TRG+ R HQF K+E+ C+P++S+ EE+
Sbjct: 238 EILTQEELPLKMTCYSACFRQEAGSAGKDTRGIIRQHQFEKVELVSICKPDQSELMFEEM 297
Query: 373 IRIEEDLYSSLGL-HFKLLLFLAEL 396
+ DL SSLGL H L+L +L
Sbjct: 298 LNCASDLLSSLGLAHRHLMLCTGDL 322
>gi|94270597|ref|ZP_01291778.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
gi|93450746|gb|EAT01810.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
Length = 424
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
++ ++IR+N V RN + L+ EL + + E++ R R V+ +
Sbjct: 2 LELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIGA 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K + + + + +EE + L E L LEE L + +L++ IPN+ VP GG++
Sbjct: 62 LKKEGDEAAASRRMEETRQLGERLKELEEQLAVVDGQLEEIVMAIPNLCEDSVPAGGDEA 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+FP K H++LG+A DF AA+++GS+F L A LE LI+
Sbjct: 122 DNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALIS 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L K G+T + P +V S+ + G P+ A ++ IEGAD LI TAE+PV
Sbjct: 182 FMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAE-DLFRIEGADLWLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH D L+E LP+ Y A++ CFR+EAG+ G T+GL R HQF K+E+ F PE SD+
Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L+ E + L L +++
Sbjct: 301 LEKLLSDAEKVLQLLELPHRVV 322
>gi|303248851|ref|ZP_07335100.1| seryl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489720|gb|EFL49653.1| seryl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 429
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 174/319 (54%), Gaps = 4/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K++R N EAV+ + R+ +L L L E V++ + +RNA + ++ K
Sbjct: 2 LDLKFVRQNPEAVAEGMARRHFPLDLPAFLALEEARRETLTAVEQKKSQRNAASAEVAKI 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K + + ++E L + L+E L ++++Q +PN+ + P G GED +
Sbjct: 62 KRQGGDAAPVLEGLGTLSAEIKALDEKTRDLDEQVRQWLLGVPNIPNASTPDGAGEDDNP 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+TVG P VF+FP+K+H +G ALD DF+ AA++SG++F L+ + LE L + L
Sbjct: 122 TVRTVGTPRVFDFPIKEHQDVGTALDGLDFERAAKLSGARFVVLRKDLARLERALAAFML 181
Query: 253 -SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ + G+T + TP IV + + G P+ A ++ +EG + LI TAE+PV +H
Sbjct: 182 DTHIADHGYTEVATPYIVNAESLTGTGQLPKFAE-DLFKLEGLESYLIPTAEVPVTNLHR 240
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
L ES LP+ Y + CFR+EAG+ G T+GL R+HQF K+E+ P+ S E+
Sbjct: 241 GETLPESALPVAYCCHTQCFRSEAGSYGKDTKGLIRLHQFGKVELVRLVHPDTSYDELEK 300
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E + L L ++++
Sbjct: 301 LTGHAEAILQKLELPYRVV 319
>gi|448383958|ref|ZP_21562956.1| seryl-tRNA ligase [Haloterrigena thermotolerans DSM 11522]
gi|445658947|gb|ELZ11759.1| seryl-tRNA ligase [Haloterrigena thermotolerans DSM 11522]
Length = 459
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 188/332 (56%), Gaps = 19/332 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +R+N + V + + +R ++ +++ +LEL E+ ++ D LR ERN + K+ G+
Sbjct: 2 LDRTDLRENPDEVRSALDDRGADVDIDELLELDERWRELKARGDDLRHERNQITKKI-GQ 60
Query: 135 L----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
L E +R++ IE ++LK + +E++ ++L DELQ+ +P + VP+G E
Sbjct: 61 LVADGEDEKREEAIERSQDLKAEIEDVEDEAIELQDELQERLLEVPQLPDESVPLGVDER 120
Query: 190 CSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
++ + G + P V H++LG+ LDI D + AA+ +G+ FY+LK E LE L
Sbjct: 121 HNVEDRRWGFDEDHDLPDEVTPHYELGEELDIIDEERAAKTTGAGFYFLKGEGAQLEHAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQCL 298
I + + ++G+ + P V+SS ++ G P+ G+N + Y + D L
Sbjct: 181 IQFMMDVHREQGYVDVFPPVPVKSSSMQGTGQLPKFADDAYRLGGSNDEEYDHD--DLWL 238
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
TAE+PV ++ D IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 239 CPTAEVPVTNMYADEILLDDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVN 298
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PE+S E+L+ E++ L L +++L
Sbjct: 299 FVEPEDSYDRLEDLLDEAEEVLRRLDLPYRIL 330
>gi|345016475|ref|YP_004818828.1| seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031818|gb|AEM77544.1| Seryl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 423
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 185/320 (57%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR+N EAV + + A+++ LEL EK + E++ L+ RN ++ + K
Sbjct: 2 LDVKRIRNNPEAVRRAVELKGEKADIDRFLELDEKRRQMLVELETLKNRRNMESDNIAKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + LI E K L + + +E+++ ++ +EL++ IPN+ H VP+G ED
Sbjct: 62 KREGKDASDLIAEMKELSDKIKEMEQEVKEVEEELERILWTIPNIPHESVPIGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ L I DF+AAA V+GS+F + K LE LIN+
Sbjct: 122 EIRRW-GEPRKFDFEPKPHWEIGEELGILDFEAAARVTGSRFTFYKGLGARLERALINFM 180
Query: 252 LSEVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L I+R G+T + P + + G P+ + + G D LI TAE+PV ++
Sbjct: 181 LDLHIERHGYTEVFPPFMAHRRSMFGTGQLPK-FEEDAFKVYGTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D+I+ LP+ + A+S CFR EAG+AG TRGL R HQF+K+E+ F +P++S E
Sbjct: 240 RDTIIDGDKLPIYHCAYSACFRQEAGSAGRDTRGLIRQHQFNKVELVKFTEPDKSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ R E++ +LGL ++++
Sbjct: 300 KMTRDAEEVLQALGLPYRVV 319
>gi|94989115|ref|YP_597216.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94993007|ref|YP_601106.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|386363277|ref|YP_006072608.1| seryl-tRNA synthetase [Streptococcus pyogenes Alab49]
gi|417856332|ref|ZP_12501391.1| seryl-tRNA ligase [Streptococcus pyogenes HKU QMH11M0907901]
gi|421892644|ref|ZP_16323267.1| Seryl-tRNA synthetase [Streptococcus pyogenes NS88.2]
gi|166223295|sp|Q1JA99.1|SYS_STRPB RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|166223296|sp|Q1JKF1.1|SYS_STRPC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|94542623|gb|ABF32672.1| seryl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94546515|gb|ABF36562.1| Seryl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|350277686|gb|AEQ25054.1| seryl-tRNA synthetase [Streptococcus pyogenes Alab49]
gi|379981589|emb|CCG26989.1| Seryl-tRNA synthetase [Streptococcus pyogenes NS88.2]
gi|387933287|gb|EIK41400.1| seryl-tRNA ligase [Streptococcus pyogenes HKU QMH11M0907901]
Length = 425
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERN-AVANKMK 132
+D K IR + + V+A ++NR S L + EL EK + + + L+ ERN A A +
Sbjct: 2 LDLKRIRTDFDTVAAKLKNRGVSEDTLTHLKELDEKRRTLLVQSEELKAERNIASAAIAQ 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDC 190
K + + + I + + + + T++ LV + ++ +PN H VPVG ED
Sbjct: 62 AKRQKEDATQQIADMQKVSADIKTIDNQLVAIDQQVTDIITVLPNTPHDSVPVGADEEDN 121
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
IR+ G P FNF VK H+ LG+ LDI D++ A+V+G++F + KN LE L N+
Sbjct: 122 VEIRRW-GTPRDFNFEVKAHWDLGEDLDILDWERGAKVTGARFLFYKNLGARLERALYNF 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L E IK G+ + TP +V + G P+ + + + LI TAE+P+ +
Sbjct: 181 MLDEHIKEGYQEIITPYMVNHDSMFGTGQYPK-FKEDTFELADTNFVLIPTAEVPLTNYY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL LP+ + A S FR+EAG+AG TRGL R+HQF K+EM F +PEES E
Sbjct: 240 RGEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPEESYQELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
++ E++ LGL ++++
Sbjct: 300 KMTANAENILQKLGLPYRVI 319
>gi|160893423|ref|ZP_02074208.1| hypothetical protein CLOL250_00973 [Clostridium sp. L2-50]
gi|156864818|gb|EDO58249.1| serine--tRNA ligase [Clostridium sp. L2-50]
Length = 427
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 177/327 (54%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N + V NI+N+ ++ L LV +EL + Q+E D LR RN ++ ++
Sbjct: 2 IDIKFLRENPDVVKQNIKNKFQDSKLPLVDEVIELDAQARATQQEADDLRANRNKLSKQI 61
Query: 132 KGKLEPSERQ-------KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+ +++ ++ E+ + L E L+E+ +L ++++ IPN+ P VP
Sbjct: 62 GALMAQGKKEEAEEIKKQVTEQAERLSE----LQENETELQAKVKEIMMVIPNIIDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F + H ++ + L D D+A V+G+ FYYL + L
Sbjct: 118 IGKDDSENVEIERFGEPVVPDFEIPYHSEIMEHLHGLDLDSARRVAGNGFYYLMGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
+I++ +I RGFT P ++RS+VV + +Y IEG D LIGT+E
Sbjct: 178 HSAVISYARDFMIDRGFTYCVPPFMIRSNVVTGV-MSFAEMDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D I+ E LP ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HSMIGKFIDQIIPEEELPKTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
ES + ++L + DL+ SL + + L
Sbjct: 297 ESKMWFDKLWQNTVDLFRSLDIPVRTL 323
>gi|423080909|ref|ZP_17069523.1| serine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423086355|ref|ZP_17074762.1| serine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357547148|gb|EHJ29044.1| serine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357551859|gb|EHJ33641.1| serine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 423
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 23/329 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K IR+N + + + R +L+ V+EL K + +EV+ ++ E N + K+
Sbjct: 2 LDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEE--DLVKLTDELQQEAQC--------IPNMTHPDV 183
+LI+EGK++ E L+E D +K DE +E + IPN+ HP+V
Sbjct: 61 --------QLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEV 112
Query: 184 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P G D ++ +T G P+ F+F K H+ +G L I DF+ A +++GS+F +
Sbjct: 113 PQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGAR 172
Query: 243 LEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGT 301
LE L+N+ L + K G+T + P + + G P+ ++ IEG + LI T
Sbjct: 173 LERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPK-FEEDMFKIEGLEYFLIPT 231
Query: 302 AEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
AE+PV IH + IL + LP+KY A++ CFR+EAG+AG TRGL R HQF+K+E+ F +
Sbjct: 232 AEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVK 291
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
PE+S + E L E + LGL ++++
Sbjct: 292 PEDSYNELESLTHDAETMLQMLGLPYRVV 320
>gi|387816252|ref|YP_005676596.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322804293|emb|CBZ01843.1| seryl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 426
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 182/323 (56%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLEL---VLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N + + NR ++ + VL+L E+ N+ +V+ L+ +RN V++++
Sbjct: 2 LDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSEV 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GE 188
K K E + ++ E KNL E + L+ L K+ +++Q IPN+ +P VP G E
Sbjct: 62 PKLKKEGKDVSNIVAEMKNLSEEIKGLDATLAKIDEKIQYIMLRIPNIPNPQVPDGETDE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D IR + P+ F+F K H+ +G L+I DF+ A +V+GS+F + K LE +I
Sbjct: 122 DNIEIRNWL-EPTKFDFEPKAHWDIGTNLNILDFERAGKVTGSRFTFYKGLGARLERAVI 180
Query: 249 NWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
++ L + K G+T + P +V + + G P+ + I D LI TAE+PV
Sbjct: 181 SYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPK-FEEDAFKISEDDYFLIPTAEVPVT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
++ D IL LPLK+ A+S CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 240 NLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYE 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L E + LG+ ++++
Sbjct: 300 ELEKLTNDAETVLKELGIPYRVV 322
>gi|126697580|ref|YP_001086477.1| seryl-tRNA ligase [Clostridium difficile 630]
gi|255099171|ref|ZP_05328148.1| seryl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304951|ref|ZP_05349125.1| seryl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|423089327|ref|ZP_17077688.1| serine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|115249017|emb|CAJ66828.1| Seryl-tRNA synthetase 1 [Clostridium difficile 630]
gi|357558317|gb|EHJ39814.1| serine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 423
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 180/329 (54%), Gaps = 23/329 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K IR+N + + + R +L+ V+EL K + +EV+ ++ E N + K+
Sbjct: 2 LDIKRIRENLDDIKKAMERRGEREFDLDAVVELDNKRREILQEVEVMKNELNVNSKKIP- 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEE--DLVKLTDELQQEAQC--------IPNMTHPDV 183
+LI+EGK++ E L+E D +K DE +E + IPN+ HP+V
Sbjct: 61 --------QLIKEGKDVTEEKARLKELSDKIKGIDEKVKEVEAKMEYTLMRIPNVPHPEV 112
Query: 184 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVM 242
P G D ++ +T G P+ F+F K H+ +G L I DF+ A +++GS+F +
Sbjct: 113 PQGETDEDNVQIRTWGEPTKFDFEHKAHWDIGTGLGILDFERAGKITGSRFTLYRGLGAR 172
Query: 243 LEMGLINWTL-SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGT 301
LE L+N+ L + K G+T + P + + G P+ ++ IEG + LI T
Sbjct: 173 LERSLMNFFLNTHTAKHGYTEVLPPFMANRNSFIGTGQLPK-FEEDMFKIEGLEYFLIPT 231
Query: 302 AEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ 361
AE+PV IH + IL + LP+KY A++ CFR+EAG+AG TRGL R HQF+K+E+ F +
Sbjct: 232 AEVPVTNIHANEILDVAELPIKYCAYTPCFRSEAGSAGRDTRGLVRQHQFNKVELVKFVK 291
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
PE+S + E L E + LGL ++++
Sbjct: 292 PEDSYNELESLTHDAETMLQMLGLPYRVV 320
>gi|297242870|ref|ZP_06926808.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889081|gb|EFH27815.1| seryl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 428
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLHNDDLRRTALKAFEEARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + K T + + N+ + P GGED ++
Sbjct: 61 TASAEEKVALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLSMEQEMLAKVEVPYRII 320
>gi|94263583|ref|ZP_01287393.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
gi|93456003|gb|EAT06154.1| tRNA synthetase, class II (G, H, P and S):Seryl-tRNA synthetase,
class IIa [delta proteobacterium MLMS-1]
Length = 427
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 7/322 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
++ ++IR+N V RN + L+ EL + + E++ R R V+ +
Sbjct: 2 LELRFIRENFALVREKTARRNLDTTALDQFPELDRRRRELLTELEEGRNHRKKVSQEIGA 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC 190
+K + + + + +EE + L E L LEE L + +L++ IPN+ VP GG++
Sbjct: 62 LKKEGDEAAASRRMEETRQLGERLKELEEQLAVVDGQLEEIVMAIPNLCEDSVPAGGDEA 121
Query: 191 SIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+ + G P F+FP K H++LG+A DF AA+++GS+F L A LE LI+
Sbjct: 122 DNVEYRRWGAPPEFDFPAKAHWELGEADGSLDFTRAAKLAGSRFALLTGFAARLERALIS 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L K G+T + P +V S+ + G P+ A ++ IEGAD LI TAE+PV
Sbjct: 182 FMLDLHTEKHGYTEVLPPFLVNSASMTATGQLPKFAE-DLFRIEGADLWLIPTAEVPVTN 240
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH D L+E LP+ Y A++ CFR+EAG+ G T+GL R HQF K+E+ F PE SD+
Sbjct: 241 IHRDETLAEKELPIYYCAYTPCFRSEAGSYGRDTKGLIRQHQFDKVELVKFTTPETSDAE 300
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+L+ E + L L +++
Sbjct: 301 LEKLLSDAEKVLQLLELPHRVV 322
>gi|16081587|ref|NP_393946.1| seryl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
gi|13878795|sp|Q9HKX5.1|SYS_THEAC RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|10639638|emb|CAC11610.1| probable seryl-tRNA synthetase [Thermoplasma acidophilum]
Length = 441
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 183/349 (52%), Gaps = 44/349 (12%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERN----AVAN 129
ID K +R N+E N R + A +E L E+ ++ +E++ LR ++N +A
Sbjct: 2 IDVKLLRSNRELFEKNCEYRGVDKAPVEDFFRLDEEWRSINRELNGLRSQKNRETRKIAE 61
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPV--GG 187
+K + S +K +E+ + + LE L K+ +E + IPN+ H VPV G
Sbjct: 62 LIKNNGDASAEKKAVED---INARISDLENKLKKIEEERDRILWTIPNLVHESVPVCFGD 118
Query: 188 EDCSIIRKTVGNPSVFNFPV--------------------KDHFQLGKALDIFDFDAAAE 227
E+ ++R VG+ VF + K H LG L++ D ++AA
Sbjct: 119 ENNQLVR-YVGHAKVFRDDIEEFKKNSGNSQDYEVLDERPKSHVDLGLDLNVIDLESAAR 177
Query: 228 VSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT- 286
+SGS+FY++KN + LEM L N+ + + +RGF+ + P ++ + RGA
Sbjct: 178 ISGSRFYFIKNRLLKLEMALENYAVDFLSQRGFSIVEPPYMLNLESM-------RGATDL 230
Query: 287 -----QVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTA 341
+Y IEG D LI T+E + + + L E LPL+ A S CFR EAGA G
Sbjct: 231 ETFKDTLYKIEGEDLYLIATSEHSIAAMLSNQFLEEKDLPLRVAGISACFRREAGAHGKD 290
Query: 342 TRGLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
T+G++RVHQF+K+E FVFC+PE+S + EE++ E +Y SLG+ ++++
Sbjct: 291 TKGIFRVHQFNKIEQFVFCKPEDSWDFLEEILGNAEAIYRSLGIPYRVV 339
>gi|153854269|ref|ZP_01995568.1| hypothetical protein DORLON_01562 [Dorea longicatena DSM 13814]
gi|149753044|gb|EDM62975.1| serine--tRNA ligase [Dorea longicatena DSM 13814]
Length = 429
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 182/323 (56%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N + V NI+N+ + L LV +EL +K +++ EV+ LR E+N ++ ++
Sbjct: 2 LDIKFVRNNPDVVKQNIKNKFQDEKLPLVDEVIELDQKNRDIKGEVEALRAEKNKISKQI 61
Query: 132 KGKLEPSERQKLIEEGKNLKEG---LVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ ++++ E + + E + L ++ ++ ++L+Q IPN+ P VP+G +
Sbjct: 62 GACMAQGKKEEAEELKRKVAESAARIEELSKEEKEVEEKLKQNMMIIPNIIDPSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F + H ++ +A D D ++A V+G+ FYYL + + +
Sbjct: 122 DSQNVEIEKFGEPFVPDFEIPYHTEIMEAFDGIDLESAGRVAGNGFYYLMGDIARIHSSV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+ + +I RGFT P ++RS+VV ++ +Y IEG D LIGT+E +
Sbjct: 182 LAYARDFMINRGFTYCVPPFMIRSNVVTGV-MSFAEMDSMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D++L E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 241 GKFIDTMLEEKQLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESKI 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 301 WYDKLWQNTVDLFRSLDIPVRTL 323
>gi|189219734|ref|YP_001940375.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
gi|238692085|sp|B3DX68.1|SYS_METI4 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|189186592|gb|ACD83777.1| Seryl-tRNA synthetase [Methylacidiphilum infernorum V4]
Length = 421
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 178/329 (54%), Gaps = 13/329 (3%)
Query: 75 IDFKWIRDNKEAVSANI--RNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVAN--- 129
+D + IR N + R++ L+ + EL K ++Q E+++ R RN +
Sbjct: 2 LDIQLIRHNLAQTKQKLALRSKGLETLLDHIFELDFKKRSLQSEIEKYRALRNKQSKEIG 61
Query: 130 --KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
K+KG+ + +L + G ++E +E++L++ +++ +PN+ H VP GG
Sbjct: 62 LKKIKGENVEGQFSELKKMGSRIEE----MEKELIQFENQINTLLLSLPNIPHDSVPTGG 117
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ + + KT G P NFP+K H++LG+ L I D + A++SGS F L+ L
Sbjct: 118 PEANKVVKTWGEPRQANFPLKTHWELGRELGILDLERGAKLSGSGFSLFTGNGAKLQRAL 177
Query: 248 INWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I + L+ + G+ L P +V + G P+ A +Y+ + + LI T E+P+
Sbjct: 178 IQFMLTIHTEEHGYKELWPPYLVTEDCMRGTGHLPKFA-LDMYATDKDNLYLIPTGEVPL 236
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
H D IL+ES LPL+Y A++ CFR EAG+AG TRGL R+HQF K+E+ +PE S
Sbjct: 237 TNFHRDEILAESSLPLRYVAYTPCFRREAGSAGKDTRGLLRLHQFDKVELVQITKPENSY 296
Query: 367 SYHEELIRIEEDLYSSLGLHFKLLLFLAE 395
+ EE++ E++ SL L ++++L ++
Sbjct: 297 TALEEMVSHAENILRSLNLCYRVVLLASQ 325
>gi|406927360|gb|EKD63402.1| hypothetical protein ACD_51C00282G0002 [uncultured bacterium]
Length = 433
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 173/329 (52%), Gaps = 15/329 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K +R+N E + +++ +++L +++ ++++++++R E+ ++K+ K
Sbjct: 2 IDLKLLRENPEIFKKACTQKRIKLDIDEIIKLDKQVRELKQQIEKIRAEKKIASDKI-AK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
L+ E+ K I+E K L + L L L EL+ + +P P+ P G +D
Sbjct: 61 LQGDEKNKAIKETKILSDKEKELSPQLESLEPELKTKLLFLPMPASPETPEGKDDSENKE 120
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
T G F+F DH + + D+ D A+++GS+ Y+LKNE + LEM ++ + L
Sbjct: 121 LYTWGKLPKFDFEPLDHMSIAEKCDLIDMPRGAKIAGSRSYFLKNEGMRLEMAIMMYALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYS----------IEGADQCLIGTAE 303
++ K+GFTP P +V + + P G Q Y+ IE ++ L GTAE
Sbjct: 181 KLTKKGFTPFIVPTLVNYEAMMGTSYFP-GGEEQAYTVGVQKEKGGAIESDNKYLTGTAE 239
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQ-- 361
+ + H D IL E LP Y FS C+R EAG G T+G+YR+HQF K+E + C+
Sbjct: 240 VALTSYHYDEILEEDTLPKLYCGFSTCYRREAGTYGKDTQGVYRIHQFQKIEQVIICKND 299
Query: 362 PEESDSYHEELIRIEEDLYSSLGLHFKLL 390
EES HE +++ E++ L L ++++
Sbjct: 300 AEESKKMHELILKNSEEVLQDLNLPYRVV 328
>gi|68487382|ref|XP_712462.1| hypothetical protein CaO19.8792 [Candida albicans SC5314]
gi|68487674|ref|XP_712318.1| hypothetical protein CaO19.1201 [Candida albicans SC5314]
gi|46433696|gb|EAK93128.1| hypothetical protein CaO19.1201 [Candida albicans SC5314]
gi|46433851|gb|EAK93279.1| hypothetical protein CaO19.8792 [Candida albicans SC5314]
Length = 496
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 161/287 (56%), Gaps = 18/287 (6%)
Query: 116 EVDRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCI 175
+++ +++ER +A ++K + + Q+ E K LK L LE+ + + +++ +A+ +
Sbjct: 109 QINDMKKERTILAERLKSNV--GDLQQFKERLKQLKSELKPLEKQVKTIQEKIYAKAESL 166
Query: 176 PNM---THPDVPVGGEDCSIIR------KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAA 226
PN+ T P P+ E I V N S V DH ++G +I DF A+
Sbjct: 167 PNLIDVTVPTDPLKEEVVQFINCQSEEDAKVSNSSA----VHDHKEIGVNFNILDFSVAS 222
Query: 227 EVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANT 286
VSG +YYL + +LE LI + LS+ +RG+ LT P IV+S +V CGF+P N
Sbjct: 223 RVSGPSWYYLIGDGALLEQALIQYALSKARRRGYLMLTPPSIVKSEIVGACGFKPNDQNN 282
Query: 287 --QVYSIEGADQCLIGTAEIPVGGIHMDSIL-SESLLPLKYAAFSHCFRTEAGAAGTATR 343
Q+Y ++G + L GTAEIP+ H ++ S + P+KY S +R EAGA+G T+
Sbjct: 283 EKQIYELKGEHKSLTGTAEIPLAAFHSSTVFPSGTQFPIKYVGVSRAYRAEAGASGKDTK 342
Query: 344 GLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
GLYRVH+F+K+E+F F E++ E+L ++ ++ + LGL KLL
Sbjct: 343 GLYRVHEFTKVELFHFTTEEKAAQELEDLKDMQVEIVTELGLSAKLL 389
>gi|419627260|ref|ZP_14160168.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380606950|gb|EIB26834.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23263]
Length = 411
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 180/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVGENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + + K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LATAEDKESLK--AKLSENKSKINKQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|415717786|ref|ZP_11467021.1| seryl-tRNA synthetase [Gardnerella vaginalis 1500E]
gi|415728884|ref|ZP_11472222.1| seryl-tRNA synthetase [Gardnerella vaginalis 6119V5]
gi|388060669|gb|EIK83353.1| seryl-tRNA synthetase [Gardnerella vaginalis 1500E]
gi|388064884|gb|EIK87399.1| seryl-tRNA synthetase [Gardnerella vaginalis 6119V5]
Length = 428
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 174/321 (54%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLRNDDLRRDALKAFEAARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + + K T + + N+ + P GGED ++
Sbjct: 61 SAPAEEKAALIAETKELAQKVAEYKVESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|161611303|ref|YP_008487.2| seryl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
Length = 426
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 178/325 (54%), Gaps = 7/325 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID + IR ++ AV ++ ++ +L + L + + +V+ L+ +RN ++ K+ G+
Sbjct: 2 IDIRLIRKDRFAVEKQLKTKDPQIDLTNICHLDHSIREAKTKVETLKAKRNEISQKI-GE 60
Query: 135 LEPSERQ--KLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-DCS 191
++ + + L+ E + L+ + + ++ E +PN+ D+ + + +
Sbjct: 61 MKRANQDTFSLMNEVAGFGTEIHFLDNQIKEWEEQFNYELSSLPNLPMEDIKISQDPKEN 120
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ K G +F+FP K+H +L + L++FDF A++SG+ + + LE LI +
Sbjct: 121 VVIKEFGQKPIFSFPFKNHVELNEKLNLFDFKRGAKISGTGWPVYRAMGARLEWALIQYM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQ--CLIGTAEIPVGGI 309
+ +K GFT P +VR + V G P+ +Q + I+ D LI TAE+P+ G+
Sbjct: 181 IEIHVKNGFTQWIPPLLVRKNTVFGSGQLPK-FESQQFKIQDEDYHLYLIPTAEVPLNGL 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
HMD I+ + L LKY A++ CFR EAGAAG+ RGL R+HQF+K+EMF F +PEES
Sbjct: 240 HMDEIIPQEELSLKYVAYTPCFRREAGAAGSQERGLIRMHQFNKVEMFCFTKPEESAQVF 299
Query: 370 EELIRIEEDLYSSLGLHFKLLLFLA 394
+++ E++ L LH++ L +
Sbjct: 300 NQMMDSAEEILQGLELHYRNALLVT 324
>gi|406909505|gb|EKD49745.1| hypothetical protein ACD_63C00059G0002 [uncultured bacterium]
Length = 432
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 184/332 (55%), Gaps = 20/332 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K +R N + +++ + +++ +LE+ + + +E+D+LR ERN ++++ K K
Sbjct: 2 IDIKLLRKNPKIYKKAAKDKGVDVDIDKLLEIDDGRSKLIQEIDKLRSERNEISDQTK-K 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+ +R I+ K +K L +E +L + E Q+ +P DVP+G +D +
Sbjct: 61 ADQKDRGNFIKRAKEIKGKLSEIEPNLKDIEKEYQKLMGRMPLPQALDVPIGEDDRA--N 118
Query: 195 KTV---GNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
K + G F+F KDH +GK LDI D + A++SG + Y LKNE V+L +GL+ +T
Sbjct: 119 KEISKHGEIPKFDFKPKDHIGIGKDLDILDLERGAKISGYRGYVLKNEGVLLHLGLLWFT 178
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI---EGADQ--------CLIG 300
+ +++K+GF P+ P +V+ V+ G P +Y + E D+ L+G
Sbjct: 179 IKKMVKKGFKPVIPPTLVKKFVLFGSGHFPF-CEEDIYKVAEEEHIDEKFKSKEPIYLVG 237
Query: 301 TAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFC 360
T+E + ++ L E LP+K FS C+R+E G+ G T+GLYR+H+F K+E VFC
Sbjct: 238 TSEPSLLALYAGKTLKEEDLPIKLCGFSQCYRSEIGSYGKDTKGLYRIHEFMKVEQVVFC 297
Query: 361 QP--EESDSYHEELIRIEEDLYSSLGLHFKLL 390
+ E S+ + +EL+ I +++ L L ++++
Sbjct: 298 KNDIETSEKFLKELLEISKEILDDLKLPYRVV 329
>gi|448584785|ref|ZP_21647528.1| seryl-tRNA ligase [Haloferax gibbonsii ATCC 33959]
gi|445727639|gb|ELZ79249.1| seryl-tRNA ligase [Haloferax gibbonsii ATCC 33959]
Length = 460
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 181/333 (54%), Gaps = 20/333 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
ID + +RD E V + RN +++ VL++Y++ +++ E D LR ERN V+ K
Sbjct: 2 IDRQLLRDEPERVRDALAARNMEGVDIDRVLDVYDEWRSLKAEGDDLRHERNEVSQKIGQ 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-- 188
+K + + E Q+ I+ LK L LE +L EL + +PN+ H VPVG +
Sbjct: 62 LKQEGKDEEAQEAIDRSGELKTELQELEARADELEAELDEALMELPNLPHESVPVGADEA 121
Query: 189 DCSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D +R+ VG + P V H+ LG+ LDI D AA+ +GS FY+LK E MLE
Sbjct: 122 DNEEVRR-VGFDDLRELPDEVTPHYDLGEELDIIDEGRAAKTTGSGFYFLKGEGAMLEHA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQC 297
L+ + L ++ + L P V+++ +E G P+ G+ T+ Y E D
Sbjct: 181 LVQFMLDVHREQEYVDLFPPIPVKTTSMEGTGQLPKFAEDAYRIGGSETENY--EDDDLW 238
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L TAE+PV ++ D IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 239 LCPTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELV 298
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PEES E L+ ++ LGL +++L
Sbjct: 299 NFVEPEESYDRLEALVDEAAEVLDRLGLPYRVL 331
>gi|34763854|ref|ZP_00144761.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886373|gb|EAA23641.1| Seryl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 424
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 176/322 (54%), Gaps = 5/322 (1%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ++ K++R+N E + ++NRNSN +++ +EL K + EV+ L+ ERN V+ ++
Sbjct: 2 RIMLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K E + LIE+ + + L+ +LV++ ++++ IPN+ H P+G ED
Sbjct: 62 ANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDED 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN
Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L ++ G+T TP +V+ V E G P+ + + D LI T+EI +
Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S
Sbjct: 240 IHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+++ E + L L ++++
Sbjct: 300 LEKMVNNAETILQRLELSYRVI 321
>gi|417787250|ref|ZP_12434933.1| seryl-tRNA synthetase [Lactobacillus salivarius NIAS840]
gi|334307427|gb|EGL98413.1| seryl-tRNA synthetase [Lactobacillus salivarius NIAS840]
Length = 425
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 180/323 (55%), Gaps = 12/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNAN-LELVLELYEKMLNVQKEVDRLREERN----AVAN 129
+D K IR N E + R ++ ++ +K + E + L++ERN A+A
Sbjct: 2 LDIKDIRLNTEEYKRRLGTRGVKPEEIDKLVAEDKKRRELLVETENLKKERNEVSEAIAQ 61
Query: 130 KMKGKLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-G 187
+ K + SE+ Q + + G +KE L+E L K+ + ++ A +PN+ +P +PVG
Sbjct: 62 AKRNKEDASEQIQAMRKVGTKIKE----LDEKLAKVEENVKSMAAHLPNLPNPTIPVGPD 117
Query: 188 EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
ED ++ VG P F+F K H+ +G+ L I DFD AA+VSG++F + K LE +
Sbjct: 118 EDSNVELYKVGTPRKFDFEPKAHWDIGEDLGILDFDRAAKVSGARFVFYKGLGAKLERAV 177
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ L E K G+T + P IV++ + G P+ + QVY + G D LI TAE+P+
Sbjct: 178 YNFMLDEHAKEGYTEVIPPYIVKAKSMYGTGQFPKFKD-QVYQVNGEDMTLIPTAEVPLT 236
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ + ++ LP+ + A S FR+EAG+AG TRGL R+HQF+K+EM + +PE+S +
Sbjct: 237 NYYREEVIPTEDLPVYFTALSPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKPEDSYN 296
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E++ + ++ LGL + ++
Sbjct: 297 ELEKMTKNAGNIMEKLGLPYHVI 319
>gi|365130912|ref|ZP_09341633.1| serine-tRNA ligase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363619269|gb|EHL70589.1| serine-tRNA ligase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 428
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 180/327 (55%), Gaps = 16/327 (4%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + ++ L LV E L + E D LR +RN ++ +
Sbjct: 2 LDIKFVRENPELVKENIKKKFQDSKLLLVDEVIALDAEYRAAITEGDGLRAQRNKLSKSI 61
Query: 132 -----KGKLEPSE--RQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVP 184
+GK + +E ++++ E+ LKE LE +L +E++Q IPNM P VP
Sbjct: 62 GALMAQGKKDEAEAVKKQVTEQADRLKE----LEMREAELQEEVRQRMLVIPNMLDPSVP 117
Query: 185 VGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVML 243
+G +D + + G P V +F + H ++ + D D+A V+G+ FYYL + L
Sbjct: 118 IGRDDSENVEVQRFGEPVVPDFEIPYHTEIMERFGGIDLDSARRVAGNGFYYLLGDIARL 177
Query: 244 EMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAE 303
++ + +I++GFT + P ++ SVV+ P + +Y IEG D LIGT+E
Sbjct: 178 HEAVLAYARDFMIEKGFTYVIPPFMMHGSVVQGVMSFPE-MDAMMYKIEGEDLYLIGTSE 236
Query: 304 IPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPE 363
+ G +D ++ E+ LPL ++S CFR E GA G RG+YR+HQF K EM V C+PE
Sbjct: 237 HTMIGRFVDQLIPEAQLPLTLTSYSPCFRKEKGAHGLEERGIYRIHQFEKQEMIVLCKPE 296
Query: 364 ESDSYHEELIRIEEDLYSSLGLHFKLL 390
+S +++E+L R +L+ SL + + L
Sbjct: 297 DSMAWYEKLWRNSVELFRSLDIPVRQL 323
>gi|419619921|ref|ZP_14153379.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51494]
gi|380602212|gb|EIB22505.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51494]
Length = 411
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSIAKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|325678148|ref|ZP_08157778.1| serine--tRNA ligase [Ruminococcus albus 8]
gi|324110153|gb|EGC04339.1| serine--tRNA ligase [Ruminococcus albus 8]
Length = 429
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 168/323 (52%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYE---KMLNVQKEVDRLREERNAVANK- 130
ID K IR E V NIR + + L LV E+ E + + D LR +RN + +
Sbjct: 2 IDIKLIRTEPELVKENIRKKFQDEKLVLVDEVAEFDKEYRAARTRADELRNQRNVKSKQI 61
Query: 131 --MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ GK + E +K+ E + + L LE +L ++++ IPN+ VP+G +
Sbjct: 62 GALMGKGQKDEAEKVKAEVNAMAKELADLEVKEEELEGKIRERMLVIPNIIDESVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V +F V H + + D D DAA E SG+ FYYLK + L +
Sbjct: 122 DSENVEIEKFGEPVVPDFEVPYHVDIMETFDGIDLDAARETSGNGFYYLKGDIARLHSAI 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT P ++RSSVV N +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYYVPPFMIRSSVVTGVMSFAEMENM-MYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G + + L E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S +
Sbjct: 241 GKFIKTTLPEAQLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSKA 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYDKLWQNSVDFFRSLDIPVRTL 323
>gi|423613644|ref|ZP_17589504.1| seryl-tRNA synthetase [Bacillus cereus VD107]
gi|401241402|gb|EJR47791.1| seryl-tRNA synthetase [Bacillus cereus VD107]
Length = 424
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R N E V A +++R + + EL + + + + L+ +RN V+ ++
Sbjct: 2 LDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQISV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + + LI E + + E + L+ +L + ++L++ IPN+ H PVG ED +
Sbjct: 62 LKREKKDAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ +T G+ F F K H+ L L I DF+ A +V+GS+F + K LE LI++
Sbjct: 122 VVARTWGDVKEFTFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + G+ + P +V + + G P+ + IE D LI TAE+PV +H
Sbjct: 182 LDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS+ LP++YAAFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILSKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L ++++
Sbjct: 301 KLTNDAERVLQLLELPYRVM 320
>gi|386720581|ref|YP_006186906.1| seryl-tRNA synthetase [Paenibacillus mucilaginosus K02]
gi|384087705|gb|AFH59141.1| seryl-tRNA synthetase [Paenibacillus mucilaginosus K02]
Length = 426
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 174/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K +R + + V + NR +N +L+ L + +EV++L+ RN V+ ++
Sbjct: 2 LDVKLLRGDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVSQEVAQ 61
Query: 134 KLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
+ E LIEE K + + + L+E++ L +L +PN+ VPVG E+ +
Sbjct: 62 LKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLPNLPQDSVPVGSSEEEN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + VG+ F F K H+++ +ALDI DF+ A +V+GS+F + K LE LIN+
Sbjct: 122 VEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + G+ + P+IV + G P+ A V+ +EG D LI TAE+PV H
Sbjct: 182 MDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAE-DVFKLEGTDYFLIPTAEVPVTNYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP + AFS CFR+EAG+AG TRGL R HQF+K+E+ PE+S+ E
Sbjct: 241 RDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQFNKIELVKLTLPEQSNDELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L +++L
Sbjct: 301 KLTADAEKVLQLLKLPYRVL 320
>gi|424847221|ref|ZP_18271803.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NW]
gi|356485508|gb|EHI15501.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NW]
Length = 411
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFIRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|86149043|ref|ZP_01067275.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597260|ref|ZP_01100495.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
gi|148926480|ref|ZP_01810163.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|218562047|ref|YP_002343826.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|384447677|ref|YP_005655728.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
gi|403055170|ref|YP_006632575.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|419619086|ref|ZP_14152598.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 129-258]
gi|419624384|ref|ZP_14157493.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|419625433|ref|ZP_14158449.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|419629891|ref|ZP_14162604.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 60004]
gi|419631910|ref|ZP_14164478.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|419632818|ref|ZP_14165270.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|419637382|ref|ZP_14169553.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639686|ref|ZP_14171704.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 86605]
gi|419647385|ref|ZP_14178790.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 53161]
gi|419648535|ref|ZP_14179873.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419656143|ref|ZP_14186965.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419661351|ref|ZP_14191677.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419666813|ref|ZP_14196805.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|419670866|ref|ZP_14200549.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673353|ref|ZP_14202823.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51037]
gi|419676256|ref|ZP_14205480.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 110-21]
gi|419676917|ref|ZP_14206079.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87330]
gi|419678399|ref|ZP_14207453.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87459]
gi|419685492|ref|ZP_14214042.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1577]
gi|419690320|ref|ZP_14218531.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1893]
gi|419692110|ref|ZP_14220210.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1928]
gi|424850488|ref|ZP_18274899.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni D2600]
gi|30173219|sp|Q9PIB3.1|SYS_CAMJE RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|85840401|gb|EAQ57658.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190321|gb|EAQ94295.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359753|emb|CAL34539.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|145844643|gb|EDK21749.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|284925660|gb|ADC28012.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
gi|356486756|gb|EHI16730.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni D2600]
gi|380593166|gb|EIB14008.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 129-258]
gi|380598802|gb|EIB19191.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|380604904|gb|EIB24902.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380607053|gb|EIB26935.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 60004]
gi|380609795|gb|EIB29434.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|380613527|gb|EIB33002.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|380615444|gb|EIB34699.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380615569|gb|EIB34811.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 86605]
gi|380620566|gb|EIB39443.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 53161]
gi|380626282|gb|EIB44763.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380635827|gb|EIB53592.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380640107|gb|EIB57567.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380647263|gb|EIB64187.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380649956|gb|EIB66623.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 110-21]
gi|380650178|gb|EIB66829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380653880|gb|EIB70273.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 51037]
gi|380655276|gb|EIB71593.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87330]
gi|380660825|gb|EIB76760.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 87459]
gi|380663706|gb|EIB79334.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1577]
gi|380669141|gb|EIB84434.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1893]
gi|380670886|gb|EIB86127.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1928]
gi|401780822|emb|CCK66516.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
Length = 411
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|415709479|ref|ZP_11463104.1| seryl-tRNA synthetase [Gardnerella vaginalis 6420B]
gi|388056151|gb|EIK79027.1| seryl-tRNA synthetase [Gardnerella vaginalis 6420B]
Length = 428
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 172/321 (53%), Gaps = 7/321 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D ++IR++ + V + R R + L + VL + K + R E+ A+ K+
Sbjct: 2 LDIQFIREHADVVKESQRKRGESVELVDEVLHNDDLRRTALKAFEEARAEQKAIGKKV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
E+ LI E K L + + + K T + + N+ + P GGED ++
Sbjct: 61 TASAEEKVALIAETKELASKVAEYKAESEKATADYTTAMWKLSNIVEDEAPEGGEDDYVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F KDH LG + D +V+GS+FY+L+ L++ ++
Sbjct: 121 VKKVGTPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVAGSRFYFLRGAVARLQIAMLTM 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI-EGADQCLIGTAEIPVGGI 309
+ + + GFT TP +VR V+ GF A+ ++Y + E DQ L+GT+E+ + G+
Sbjct: 181 AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHAD-EIYRLREPDDQYLVGTSEVALAGM 239
Query: 310 HMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYH 369
H D IL S L+Y +S C+R EAGAAG T G+ RVHQF K+EMFV+C+ E+S + H
Sbjct: 240 HEDEILDLSNGALRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYCKQEDSRAEH 299
Query: 370 EELIRIEEDLYSSLGLHFKLL 390
++L+ +E+++ + + + ++++
Sbjct: 300 QKLLGMEQEMLAKVEVPYRII 320
>gi|419640102|ref|ZP_14172040.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|419652294|ref|ZP_14183373.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380619810|gb|EIB38846.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|380629573|gb|EIB47829.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 2008-894]
Length = 411
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|52145196|ref|YP_081631.1| seryl-tRNA synthetase [Bacillus cereus E33L]
gi|67461705|sp|Q63HF6.1|SYS_BACCZ RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|51978665|gb|AAU20215.1| serine--tRNA ligase (seryl-tRNA synthetase) [Bacillus cereus E33L]
Length = 424
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 177/320 (55%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K++R N E V A +++R + + EL + + + + L+ +RN V+ ++
Sbjct: 2 LDIKFLRTNFEEVKAKLQHRGEDLTDFGRFEELDTRRRELLVQTEELKSKRNEVSQQISV 61
Query: 134 -KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + + LI E + + E + L+ +L + ++L++ IPN+ H PVG ED +
Sbjct: 62 LKREKKDAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPVGETEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
++ +T G FNF K H+ L L I DF+ A +V+GS+F + K LE LI++
Sbjct: 122 VVARTWGEVKEFNFEPKPHWDLATDLGILDFERAGKVTGSRFVFYKGAGARLERALISFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L + G+ + P +V + + G P+ + IE D LI TAE+PV +H
Sbjct: 182 LDLHTDEHGYEEVLPPYMVNRASMTGTGQLPK-FEEDAFRIESEDYFLIPTAEVPVTNMH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL++ LP++YAAFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 RDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L ++++
Sbjct: 301 KLTNDAERVLQLLELPYRVM 320
>gi|317511243|ref|ZP_07968587.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
gi|315929261|gb|EFV08477.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
Length = 411
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|262196822|ref|YP_003268031.1| seryl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262080169|gb|ACY16138.1| seryl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 413
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 164/317 (51%), Gaps = 7/317 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K+I N +AV + R + +++ +L ++ V + + +R+E ++A + K
Sbjct: 2 LDIKFITQNPDAVRETCKTRGYDVDVDAILSADQERREVLRRYEAVRQESKSLAKQWKQA 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
ER+ + LK L L + + L ++ +PN VPVGGE+ +I+
Sbjct: 62 EGADERRA---RAQQLKAEEAELAGQLRDMEEALSEKISWLPNFLDERVPVGGEEANIVV 118
Query: 195 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSE 254
++VG P + H +LG LD+ D + ++FY LKN AV + LI
Sbjct: 119 RSVGEQPTLEAP-RSHEELGAGLDLIDIPRGVNAAKARFYCLKNAAVKMRYALIRMFTEH 177
Query: 255 VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSI 314
+GF + P + R+ + G+ P A Y +E D LIGT+E + G+H+D +
Sbjct: 178 AESQGFQLVCPPFLARNRTLFASGYLPFAAKDN-YKLENEDLSLIGTSEQAILGMHLDEM 236
Query: 315 LSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEELIR 374
LSE LPL Y S CFRTEAG+ G T G+ RVHQF KLE V+C P+ESD +H+ +
Sbjct: 237 LSE--LPLLYLGDSMCFRTEAGSYGRDTAGILRVHQFYKLEQLVYCHPDESDKWHQACLE 294
Query: 375 IEEDLYSSLGLHFKLLL 391
EE L L + ++++L
Sbjct: 295 NEEWLMQELEVPYQVVL 311
>gi|148657569|ref|YP_001277774.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|166223283|sp|A5UYX1.1|SYS_ROSS1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|148569679|gb|ABQ91824.1| seryl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 424
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 3/316 (0%)
Query: 75 IDFKWIRDNKEAVSANI-RNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D + IR+ + V A++ R A ++ VL E+ + +EV++L+ RNAV+ ++
Sbjct: 2 LDIRLIREQPDLVKASLGRTGVDPAQVDAVLAYDEQRRALLREVEQLKALRNAVSKEIGK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ + R I E + + + + L+ +L + ++ + N+ HP VP G E ++
Sbjct: 62 MSDAAARDAKIAEMRAVGDRIAELDRELAAVEEQQYAALMELRNLPHPSVPDGPDETYNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H++LG+ALDI DF+ ++SGS+FY LK L+ LI W L
Sbjct: 122 VIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRALIQWML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
K+G+ + TP +V+ + P+ + +E D L+ TAE+PV +H D
Sbjct: 182 DLHGKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLYRDVED-DLWLVPTAEVPVTNLHRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LPL+Y A++ CFR E +AG RG+ R HQF K+EM++F +PE S E+L
Sbjct: 241 EILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDELEKL 300
Query: 373 IRIEEDLYSSLGLHFK 388
E+ LGL F+
Sbjct: 301 RADAEETCRLLGLPFR 316
>gi|337744377|ref|YP_004638539.1| SerS protein [Paenibacillus mucilaginosus KNP414]
gi|336295566|gb|AEI38669.1| SerS [Paenibacillus mucilaginosus KNP414]
Length = 426
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 174/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D K +R + + V + NR +N +L+ L + +EV++L+ RN V+ ++
Sbjct: 2 LDVKLLRGDLDRVKQGLSNRGANLDDLDRFTSLDTNRRQLLQEVEQLKNRRNVVSQEVAQ 61
Query: 134 KLEPSER-QKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-EDCS 191
+ E LIEE K + + + L+E++ L +L +PN+ VPVG E+ +
Sbjct: 62 LKKAKENADHLIEEMKVVGDRIKALDEEIRVLEADLDSILMSLPNLPQDSVPVGSSEEEN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + VG+ F F K H+++ +ALDI DF+ A +V+GS+F + K LE LIN+
Sbjct: 122 VEIRRVGDVPAFGFEPKPHWEVAQALDILDFENAGKVTGSRFVFYKGLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + G+ + P+IV + G P+ A V+ +EG D LI TAE+PV H
Sbjct: 182 MDLHADQHGYEEMLPPQIVNRDSLTGTGQLPKFAE-DVFKLEGTDYFLIPTAEVPVTNYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D ILS LP + AFS CFR+EAG+AG TRGL R HQF+K+E+ PE+S+ E
Sbjct: 241 RDDILSAEDLPKYFVAFSACFRSEAGSAGRDTRGLIRQHQFNKIELVKLTLPEQSNDELE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E + L L +++L
Sbjct: 301 KLTADAEKVLQLLKLPYRVL 320
>gi|154253470|ref|YP_001414294.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
gi|171769667|sp|A7HXK4.1|SYS_PARL1 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|154157420|gb|ABS64637.1| seryl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
Length = 435
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 174/326 (53%), Gaps = 11/326 (3%)
Query: 76 DFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM---K 132
D K IRD+ A A + R ++E+ E+ + + L++ RN + ++ K
Sbjct: 3 DIKAIRDDAGAFDAGLAKRGLAPQAARLIEIDERRRAIITSLQELQQRRNDASKQIGQAK 62
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K + + Q L+EE ++K + EE E++ IPN+ DVPVG E +
Sbjct: 63 AKKDDALAQSLMEEVASIKSAIQEGEEKERAANAEIEAALASIPNIPFDDVPVGPDESAN 122
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+IR + G NF K+HF LG+AL + DF+AAA++SG++F LK + LE + N+
Sbjct: 123 VIRHSHGKAREMNFAPKEHFDLGEALGLMDFEAAAKMSGARFTVLKGQLARLERAIGNFM 182
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEG---ADQ---CLIGTAEI 304
+ + G+ + P +VR + P+ + Q + +G DQ LI TAE+
Sbjct: 183 VDLHTTEFGYEEVAPPLMVRDDAMFGTAQLPKFEDDQFATFKGLARDDQEKYWLIPTAEV 242
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
P+ + +SILSE LP ++ A++ CFR EAG+AG TRG+ R HQFSK+E+ PE+
Sbjct: 243 PLTNLVRESILSEEELPKRFTAYTACFRAEAGSAGRDTRGMIRQHQFSKVELVSITTPEK 302
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
S HE ++ E++ L LH++++
Sbjct: 303 SREEHERMLSCAEEVLKRLDLHYRVM 328
>gi|378550993|ref|ZP_09826209.1| hypothetical protein CCH26_12929 [Citricoccus sp. CH26A]
Length = 428
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 171/326 (52%), Gaps = 18/326 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQK-------EVDRLREERNAV 127
ID K + +N + A+ R R ++ +L ++ML+ + LR E+
Sbjct: 2 IDVKHLTENPDLYRASQRARGADESL------VDQMLSADAGRRSSIAAFEELRAEQKLF 55
Query: 128 ANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
++ + E+Q L+ E K L + E + + EL + + PN+ VP GG
Sbjct: 56 GKRVAAA-QGEEKQALLAEVKELAARVKAAEAEANEAQAELDRLQRLFPNLIEDGVPAGG 114
Query: 188 EDCSIIRKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLE 244
ED + KTVG F F +DH ++G+ + D + A+VSGS+FY+LK LE
Sbjct: 115 EDDFTVLKTVGTVRDFAADGFTPRDHLEIGELIGAIDMERGAKVSGSRFYFLKGVGARLE 174
Query: 245 MGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEI 304
+ L+ L ++ GF P+ TP +VR ++ GF + ++Y +E D L+GT+E+
Sbjct: 175 IALMQVGLDLAVQNGFIPMITPTLVRPETMQGTGFDVE-HDDEIYKLERDDLYLVGTSEV 233
Query: 305 PVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEE 364
+ G H D IL P +YA +S C+R EAGAAG TRG+ RVHQF+KLEMF++ ++
Sbjct: 234 SLAGYHADEILELGNEPTRYAGWSTCYRREAGAAGKDTRGIIRVHQFNKLEMFIYTTQDQ 293
Query: 365 SDSYHEELIRIEEDLYSSLGLHFKLL 390
+ H L+ EE + + + L ++++
Sbjct: 294 AAEEHRRLLDWEEQMLAKVELPYRVI 319
>gi|304385427|ref|ZP_07367772.1| serine--tRNA ligase [Pediococcus acidilactici DSM 20284]
gi|304328634|gb|EFL95855.1| serine--tRNA ligase [Pediococcus acidilactici DSM 20284]
Length = 426
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 179/323 (55%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV----DRLREERNAVANK 130
+D K IR++ + V + R E + +L K N ++E+ + L++ RN V+++
Sbjct: 2 LDLKMIRNHTDEVKEKLATRGVQP--ETIDQLLAKD-NQRRELIVKSESLKKVRNDVSDQ 58
Query: 131 M-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GE 188
+ + K + + I++ + + + + L+E L K+ E++ +A +PN+ HPDVPV E
Sbjct: 59 ISQMKRNHEDANEPIQKMRKVSQEIKELDEQLEKVAAEVEDQAAHLPNLPHPDVPVSLTE 118
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ S+ + G P F+F K H+++G+AL I DF+ AA+V+GS+F Y + LE +
Sbjct: 119 EGSVELRKFGTPRKFDFKPKAHWEIGEALGILDFERAAKVAGSRFVYYVGDGARLERAVY 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVG 307
N+ L + + GFT TP +V + + G P+ T Y I+ LI TAE+P+
Sbjct: 179 NFFLDQNVAAGFTEEITPYMVNDASMFGTGQFPKFKETHAGYEIKDEQLTLIPTAEVPLV 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ D IL E LP+ A S FR+EAG+AG TRGL R+HQF+K+EM +PE+S
Sbjct: 239 NFYRDEILDEDQLPINVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKITKPEDSWQ 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E L R E L LGL + ++
Sbjct: 299 ELENLTRHAETLLQKLGLPYHVI 321
>gi|39995148|ref|NP_951099.1| seryl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|409910622|ref|YP_006889087.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|67461826|sp|Q74H55.1|SYS_GEOSL RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|39981910|gb|AAR33372.1| seryl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298504178|gb|ADI82901.1| seryl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 422
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 171/318 (53%), Gaps = 3/318 (0%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++R+N E V A + R S +L EL E+ + E + L+ +N+V+ +
Sbjct: 2 LDAKYLRENLEEVEARLATRGSEVSLGRFRELDERRRALLTESESLKALKNSVSEAISKV 61
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIR 194
+ S+ Q I E + + + L+++L + DELQ +PN+ HP VPVG + +
Sbjct: 62 KDKSQIQDKIAEMREVGVRIKGLDDELRGIEDELQMVLLTVPNVPHPTVPVGASEADNRQ 121
Query: 195 -KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+T G P F F K H+++G+ L I DF+ A+++G++F + LE L+N+ L
Sbjct: 122 VRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLERALVNFMLD 181
Query: 254 EVIKR-GFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
+R + + P +V + G P+ + ++ +EG D LI TAE+PV IH
Sbjct: 182 LHTERHNYLEMLPPFVVNRESMTGTGQLPKFED-DLFHLEGVDYFLIPTAEVPVTNIHRA 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL + LPL Y A++ CFR EAG+ G RGL R HQF+K+E+ F P S E+L
Sbjct: 241 EILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKL 300
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ E++ LGL ++++
Sbjct: 301 LSNAEEVLRQLGLAYRVV 318
>gi|392943895|ref|ZP_10309537.1| seryl-tRNA synthetase [Frankia sp. QA3]
gi|392287189|gb|EIV93213.1| seryl-tRNA synthetase [Frankia sp. QA3]
Length = 420
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D ++IR+N +AV + + + +++ +L+L + +Q EVD + R + A + K
Sbjct: 2 LDKRFIRENPQAVKDAVAVKGIDLDVDELLQLDQDNRKLQFEVDEAQARRKSFAKQF-AK 60
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSII 193
+ + R +L E + L L E L + + L + PN+ PVG E +++
Sbjct: 61 ADEARRAELRVEHEAFDGQLRDLREQLARTSARLSELMLLTPNIPWSGAPVGPDESANVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
+TVG P F+F DH +L + +F A +V+G + Y L + VMLE + ++ L
Sbjct: 121 LRTVGTPPEFDFTPLDHTELAEKRGWAEFARARKVAGERAYALVGDMVMLERAVHSYALD 180
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDS 313
+ R FTP+ P +VR + G P+ A ++Y+I D L GTAE+ + G+H
Sbjct: 181 LLRGREFTPVAVPALVREEPLIGTGMLPK-AREEIYAIPEDDLYLAGTAEVALVGLHAGE 239
Query: 314 ILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD--SYHEE 371
IL + LP++YA S CFR E G+A RGL RVHQF K+E FV C +E++ S+H E
Sbjct: 240 ILDAARLPIRYAGISPCFRREIGSASRDVRGLLRVHQFEKVEQFVLCAADEAESASWHAE 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L+ E + S LGL ++++
Sbjct: 300 LLATAERILSDLGLCYEVV 318
>gi|419697601|ref|ZP_14225333.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380678011|gb|EIB92870.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni LMG
23211]
Length = 411
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 181/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKIAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L ++ ++ ++ L E + E K L +EL++ A IPN+ VPVG ED
Sbjct: 59 LAMAQDKESLK--AKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|254822673|ref|ZP_05227674.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379744924|ref|YP_005335745.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379752213|ref|YP_005340885.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-02]
gi|379759635|ref|YP_005346032.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-64]
gi|387873606|ref|YP_006303910.1| seryl-tRNA synthetase [Mycobacterium sp. MOTT36Y]
gi|406028545|ref|YP_006727435.1| seryl-tRNA synthetase [Mycobacterium indicus pranii MTCC 9506]
gi|443308526|ref|ZP_21038312.1| seryl-tRNA synthetase [Mycobacterium sp. H4Y]
gi|378797288|gb|AFC41424.1| seryl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|378802429|gb|AFC46564.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-02]
gi|378807577|gb|AFC51711.1| seryl-tRNA synthetase [Mycobacterium intracellulare MOTT-64]
gi|386787064|gb|AFJ33183.1| seryl-tRNA synthetase [Mycobacterium sp. MOTT36Y]
gi|405127092|gb|AFS12347.1| Seryl-tRNA synthetase [Mycobacterium indicus pranii MTCC 9506]
gi|442763642|gb|ELR81641.1| seryl-tRNA synthetase [Mycobacterium sp. H4Y]
Length = 419
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 172/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +R++ +AV + +R + L + +L D LR ++ + A+K G
Sbjct: 2 IDLKLLREDPDAVRRSQLSRGEDPTLVDTLLSADAARRAAISSADALRADQKS-ASKSVG 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+ K L E + E + I N+ VP GGED +
Sbjct: 61 AASPDERPALLARAKELAEQVKAAEAAQAEAEAAFTAAHMAISNVVIDGVPAGGEDDFAV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
TVG P + P KDH +LG++L + D A+VSGS+FY+L + +L++GL+
Sbjct: 121 LDTVGEPPALDDP-KDHLELGESLGLIDMQRGAKVSGSRFYFLTGQGALLQLGLLQLAAQ 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF GA+ + VY ++ D L+GT+E+P+ G H +
Sbjct: 180 LAVSNGFTLIIPPVLVRPEVMSGTGFL--GAHAEEVYHLDADDLYLVGTSEVPLAGYHAN 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C P ++++ H+ L
Sbjct: 238 EILDLSGGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + ++ + + + ++++
Sbjct: 298 LGWQREMLARIEVPYRVI 315
>gi|326202421|ref|ZP_08192290.1| seryl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987539|gb|EGD48366.1| seryl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 425
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 178/324 (54%), Gaps = 10/324 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D +++R+N E V NIRN+ + L LV E L +M + +E + LR RN ++ ++
Sbjct: 2 LDLRFVRENPEIVKQNIRNKFQDRKLGLVDEVIALDAEMRSTMQEAETLRANRNKISKQI 61
Query: 132 KGKL---EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
G + + +E +++ ++ E L LE +L ++++ IPN+ VP+G +
Sbjct: 62 GGLMAQGKKAEAEEMKQQVTAQSERLAALEVKETELEEKVKNILMTIPNIIDSSVPIGKD 121
Query: 189 DCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D + + G P V F V H ++ + L D D+A +V+G+ FYYL + L +
Sbjct: 122 DSENVEVQRYGEPVVPEFEVPYHTEIMEKLKGIDLDSARKVAGNGFYYLMGDIARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIPV 306
I++ +I+RGFT P ++RS VV F A +Y IEG D LIGT+E +
Sbjct: 182 ISYARDFMIERGFTYCIPPFMIRSEVVTGVMSFAEMEA--MMYKIEGEDLFLIGTSEHSM 239
Query: 307 GGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESD 366
G +D+I+ E+ LP ++S CFR E GA G RG+YR+HQF K EM V C+PE+S
Sbjct: 240 IGKFIDTIIPETSLPHTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMVVVCKPEDSK 299
Query: 367 SYHEELIRIEEDLYSSLGLHFKLL 390
+++++ + DL+ S+ + + L
Sbjct: 300 MWYDKMWQNTVDLFRSMDIPVRTL 323
>gi|445064210|ref|ZP_21376298.1| seryl-tRNA synthetase [Brachyspira hampsonii 30599]
gi|444504413|gb|ELV05087.1| seryl-tRNA synthetase [Brachyspira hampsonii 30599]
Length = 426
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 178/325 (54%), Gaps = 9/325 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
ID K IR+N E V N+R R S +L+ + EL + LN+ KEV++ R ++N + K+
Sbjct: 2 IDVKLIRENIELVEENLRKRRSKVSLDKLKELEHERLNLLKEVEQDRAKKNEASKKIGEC 61
Query: 135 LEP---SERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
++ E +K+ EE KN E L EE L +L + + E +PNM DVP G ++ +
Sbjct: 62 MKAGNKDEAEKIKEEMKNFTESLNKKEEKLTELEESVNNEILYLPNMLSEDVPDGDDEKA 121
Query: 192 ---IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
IIR G P F+F VKDH + LDI D + A ++ ++F +K + LE LI
Sbjct: 122 NKEIIR--WGEPRKFDFEVKDHVDIAVGLDILDIERAVRMARTRFSLMKGKGAALERALI 179
Query: 249 NWTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ L + + G+T P +V S + G P+ + + LI TAE+P+
Sbjct: 180 NFMLKKHTSENGYTEYVPPMLVNSRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
I+ + I+ ES+LPL A++ CFR+EAG+ G RGL R HQF K+E+ C ++S
Sbjct: 240 NIYREEIIPESMLPLYCTAYTPCFRSEAGSYGKDMRGLIRQHQFDKVELVKVCAADKSKE 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLLLF 392
HE++++ E + +L L +++++
Sbjct: 300 EHEKMLKDAESILQALELPYRVVVL 324
>gi|357236550|ref|ZP_09123893.1| putative serine--tRNA ligase [Streptococcus criceti HS-6]
gi|356884532|gb|EHI74732.1| putative serine--tRNA ligase [Streptococcus criceti HS-6]
Length = 426
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 10/322 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNA-NLELVLELYEKMLNVQKEVDRLREERN----AVAN 129
+D K IR N + V+ N+ +R A L+ + EL K ++ + + L+ RN A+A
Sbjct: 2 LDLKRIRQNFDDVAKNLASRGVKAETLDQLKELDIKRRDLLVKSEELKAHRNIASAAIAQ 61
Query: 130 KMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG-E 188
+ K + SE+ I E + + + ++ +L ++ EL +PNM H DVPVG E
Sbjct: 62 AKRNKEDASEQ---IAEMQQVSAQIKAIDAELTEVDQELNDIVVTLPNMPHADVPVGADE 118
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D ++ + G P F+F VK H+ LG+ LDI D++ A+V+GS+F + K LE +
Sbjct: 119 DENVEVRRWGTPRNFDFEVKAHWDLGEGLDILDWERGAKVTGSRFLFYKGLGARLERAIY 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
N+ L E K G+T + P +V + G P+ + + +D LI TAE+P+
Sbjct: 179 NFMLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPK-FKEDTFELADSDYVLIPTAEVPLTN 237
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
+ D I+ LP+K+ A S FR+EAG+AG TRGL R+HQF K+EM F +PE S
Sbjct: 238 FYRDEIVDGKDLPIKFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFAKPENSYDE 297
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+++ E + L L ++++
Sbjct: 298 LEKMVANAESILQKLELPYRVI 319
>gi|418048469|ref|ZP_12686556.1| Seryl-tRNA synthetase [Mycobacterium rhodesiae JS60]
gi|353189374|gb|EHB54884.1| Seryl-tRNA synthetase [Mycobacterium rhodesiae JS60]
Length = 417
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 6/318 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K +RD+ +AV + +R + L + +L+ D LR E+ A + K+ G
Sbjct: 2 IDLKLLRDDPDAVRRSQLSRGEDPGLVDALLDADAARRAAISAADSLRAEQKAASKKV-G 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
P ER L+E K L + + E + I N+ VP GGED ++
Sbjct: 61 SSSPDERPALLERAKELAAQVKSAESAQTQAEAAFASAHMSIQNVIIDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLS 253
VG P P KDH +LG+ L + D + A+VSGS+FY+L +L++GL+ +
Sbjct: 121 LDVVGQPRDIENP-KDHLELGETLGLIDMERGAKVSGSRFYFLTGRGALLQLGLLQLAVR 179
Query: 254 EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQ-VYSIEGADQCLIGTAEIPVGGIHMD 312
+ GFT + P +VR V+ GF GA+ + +Y + D L+GT+E+P+ G H D
Sbjct: 180 VATENGFTLMIPPVLVRPEVMAGTGFL--GAHAEEIYHLPDDDLYLVGTSEVPLAGYHSD 237
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL S PL+YA +S CFR EAG+ G TRG+ RVHQF K+E FV+C+P+E+++ H+ L
Sbjct: 238 EILDLSGGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCRPDEAEAEHQRL 297
Query: 373 IRIEEDLYSSLGLHFKLL 390
+ + + + + ++++
Sbjct: 298 LGWQRQMLELIDVPYRVI 315
>gi|218192264|gb|EEC74691.1| hypothetical protein OsI_10395 [Oryza sativa Indica Group]
Length = 445
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 183/327 (55%), Gaps = 13/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIR--NRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVAN 129
+D R K IR RN +A++ELV E L ++ Q E+D++R+E N +
Sbjct: 2 LDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTSK 61
Query: 130 KM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
++ K K + + LI+ + +K+ L E ++ + L + I N+ H VPV +
Sbjct: 62 EIGKLKAKKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPVSDD 121
Query: 189 DCS-IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ + +I +T G + +K+H L K LDI + +V+G + YYLK+E V+L + L
Sbjct: 122 EANNLIVRTWGEKRM-EGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLNLAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIP 305
IN+ L+ + KRGF P+ TP +R + KC Q + ++Y + +G ++ LI T+E P
Sbjct: 181 INFGLAFLRKRGFKPMQTPFFMRKETMGKCA-QLAQFDEELYKLTGDGEEKYLIATSEQP 239
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ H+ + + LP++YA +S CFR EAG+ G T G++RVHQF K+E F P ++
Sbjct: 240 LCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDN 299
Query: 366 DSY--HEELIRIEEDLYSSLGLHFKLL 390
+S+ HEE+I+ ED Y +GL ++L+
Sbjct: 300 ESWEMHEEMIKNSEDFYKEIGLPYQLV 326
>gi|262066815|ref|ZP_06026427.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291379481|gb|EFE86999.1| serine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 421
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 176/319 (55%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ + L K V EV+ L+ +RN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNIDMDAFVALDTKRREVLSEVEALKRDRNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ +E++ IPN+ HP P+G ED +
Sbjct: 62 KKEKKDANHLIEKMGGVSSKIKELDAELVEIDEEIKNIQMTIPNVYHPSTPIGPDEDSNK 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ +++SGS+F + A LE LI++ L
Sbjct: 122 EIRRWGEPKKFDFEPKAHWDIGEDLGILDFERGSKLSGSRFVLYRGAAARLERALISFML 181
Query: 253 -SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
+ ++ G+T TP +V++ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DTHTLEHGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGRDVKGLIRLHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E + L L ++++
Sbjct: 300 MVNNAETILQRLELPYRVI 318
>gi|448342586|ref|ZP_21531534.1| seryl-tRNA ligase [Natrinema gari JCM 14663]
gi|445625341|gb|ELY78703.1| seryl-tRNA ligase [Natrinema gari JCM 14663]
Length = 459
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 184/332 (55%), Gaps = 19/332 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +R+N + V + +R ++ +L+ LEL E+ ++ D LR +RN + ++ GK
Sbjct: 2 LDRTHLRENPDEVRDALDDRGADVDLDEFLELDERWRELKARGDDLRHDRNQITEQI-GK 60
Query: 135 L----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
L + ER++ I+ + LK + +EE+ V+L EL++ IP + H VP+G E
Sbjct: 61 LVAEGKDEEREEAIQRSRELKAEIEDVEEEAVELQAELRERMLEIPQLPHESVPLGVDER 120
Query: 190 CSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
++ + G P + H++LG+ LDI D + AA+ +G+ FY+LK E LE L
Sbjct: 121 HNVEDRRWGFDDAHELPEEITPHYELGEELDIIDEERAAKTTGAGFYFLKGEGAQLEHAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQCL 298
I + + ++G+ L P V+S+ + G P+ G+N + Y+ + D L
Sbjct: 181 IQFMMDIHREQGYVDLFPPVPVKSTSMRGTGQLPKFADDAYRVGGSNEEEYADD--DLWL 238
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
TAE+PV ++ + IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 239 CPTAEVPVTNMYRNEILLQDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVN 298
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +P+ES E L+ ED+ LGL +++L
Sbjct: 299 FVEPDESYDRLENLLAEAEDVLKRLGLPYRIL 330
>gi|421144825|ref|ZP_15604730.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488792|gb|EJG09642.1| seryl-tRNA synthetase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 421
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 175/319 (54%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
++ K++R+N E + ++NRNSN +++ +EL K + EV+ L+ ERN V+ ++
Sbjct: 2 LELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEIANL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
K E + LIE+ + + L+ +LV++ ++++ IPN+ H P+G ED ++
Sbjct: 62 KKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDEDYNL 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN+ L
Sbjct: 122 EIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALINFML 181
Query: 253 S-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
++ G+T TP +V+ V E G P+ + + D LI T+EI + IH
Sbjct: 182 DVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTNIHR 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S E+
Sbjct: 240 KEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
++ E + L L ++++
Sbjct: 300 MVNNAETILQRLELPYRVI 318
>gi|448566844|ref|ZP_21637099.1| seryl-tRNA ligase [Haloferax prahovense DSM 18310]
gi|445713433|gb|ELZ65210.1| seryl-tRNA ligase [Haloferax prahovense DSM 18310]
Length = 460
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 180/333 (54%), Gaps = 20/333 (6%)
Query: 75 IDFKWIRDNKEAVSANIRNRN-SNANLELVLELYEKMLNVQKEVDRLREERNAVANK--- 130
ID + +RD E V + RN +++ VL++Y++ +++ E D LR ERN V+ K
Sbjct: 2 IDRQLLRDEPERVRDALAARNMEGVDIDRVLDVYDEWRSLKAEGDDLRHERNEVSQKIGQ 61
Query: 131 MKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE-- 188
+K + + E Q+ I+ LK L LE +L EL +PN+ H VPVG +
Sbjct: 62 LKQEGKDEEAQEAIDRSGELKTELQELEARADELEAELDDALMELPNLPHESVPVGADEA 121
Query: 189 DCSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
D +R+ VG + P V H+ LG+ LDI D AA+ +GS FY+LK E MLE
Sbjct: 122 DNEEVRR-VGFDDLRELPDEVTPHYDLGEELDIIDEGRAAKTTGSGFYFLKGEGAMLEHA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQC 297
L+ + L ++ + L P V+++ +E G P+ G+ T+ Y E D
Sbjct: 181 LVQFMLDVHREQEYVDLFPPIPVKTTSMEGTGQLPKFAEDAYRIGGSETENY--EDDDLW 238
Query: 298 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 357
L TAE+PV ++ D IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 239 LCPTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELV 298
Query: 358 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +PEES E L+ ++ LGL +++L
Sbjct: 299 NFVEPEESYDRLEALVDEAAEVLDRLGLPYRVL 331
>gi|294784673|ref|ZP_06749961.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|294486387|gb|EFG33749.1| serine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 424
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 176/322 (54%), Gaps = 5/322 (1%)
Query: 72 KAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+ ++ K++R+N E + ++NRNSN +++ +EL K + EV+ L+ ERN V+ ++
Sbjct: 2 RIMLELKFMRENVEMLKEMLKNRNSNVDMDTFVELDSKRREILSEVENLKRERNNVSAEI 61
Query: 132 KG-KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
K E + LIE+ + + L+ +LV++ ++++ IPN+ H P+G ED
Sbjct: 62 ANLKKEKKDANHLIEKMGGVSAKIKELDAELVEIDEKIKDIQLNIPNVYHSSTPIGPDED 121
Query: 190 CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
++ + G P F+F K H+ +G+ L I DF+ A++SGS+F + A LE LIN
Sbjct: 122 YNLEIRKWGVPKKFDFEPKSHWDIGENLGILDFERGAKLSGSRFVLYRGAAARLERALIN 181
Query: 250 WTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGG 308
+ L ++ G+T TP +V+ V E G P+ + + D LI T+EI +
Sbjct: 182 FMLDVHTLEEGYTEHITPFMVKPEVCEGTGQLPKFEEDMYKTTD--DMYLISTSEITMTN 239
Query: 309 IHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSY 368
IH IL +S LP Y A+S CFR EAG+ G +GL R+HQF+K+EM E S
Sbjct: 240 IHRKEILEQSELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDE 299
Query: 369 HEELIRIEEDLYSSLGLHFKLL 390
E+++ E + L L ++++
Sbjct: 300 LEKMVNNAETILQRLELPYRVI 321
>gi|418069703|ref|ZP_12706980.1| seryl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
gi|357536234|gb|EHJ20265.1| seryl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
Length = 426
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 179/323 (55%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV----DRLREERNAVANK 130
+D K IR++ + V + R E + +L K N ++E+ + L++ RN V+++
Sbjct: 2 LDLKMIRNHTDEVKEKLATRGVQP--ETIDQLLAKD-NQRRELIVKSESLKKVRNDVSDQ 58
Query: 131 M-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GE 188
+ + K + + I++ + + + + L+E L K+ E++ +A +PN+ HPDVPV E
Sbjct: 59 ISQMKRNHEDANEPIQKMRKVSQEIKELDEQLEKVAAEVEDQAAHLPNLPHPDVPVSLTE 118
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
+ S+ + G P F+F K H+++G+AL I DF+ AA+V+GS+F Y + LE +
Sbjct: 119 EGSVELRKFGTPRKFDFKPKAHWEIGEALGILDFERAAKVAGSRFVYYVGDGARLERAVY 178
Query: 249 NWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQV-YSIEGADQCLIGTAEIPVG 307
N+ L + + GFT TP +V + + G P+ T Y I+ LI TAE+P+
Sbjct: 179 NFFLDQNVAAGFTEEITPYMVNDASMFGTGQFPKFKETHAGYEIKDEPLTLIPTAEVPLV 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ D IL E LP+ A S FR+EAG+AG TRGL R+HQF+K+EM +PE+S
Sbjct: 239 NFYRDEILDEDQLPINVTALSPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKITKPEDSWQ 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E L R E L LGL + ++
Sbjct: 299 ELENLTRHAETLLQKLGLPYHVI 321
>gi|115451355|ref|NP_001049278.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|108706679|gb|ABF94474.1| Seryl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547749|dbj|BAF11192.1| Os03g0198400 [Oryza sativa Japonica Group]
gi|215736959|dbj|BAG95888.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765322|dbj|BAG87019.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624378|gb|EEE58510.1| hypothetical protein OsJ_09790 [Oryza sativa Japonica Group]
Length = 445
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 183/327 (55%), Gaps = 13/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIR--NRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVAN 129
+D R K IR RN +A++ELV E L ++ Q E+D++R+E N +
Sbjct: 2 LDINLFRTEKGGDPELIRKSQRNRSASVELVDEVIALDDQWRQRQFELDKIRQELNKTSK 61
Query: 130 KM-KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
++ K K + + LI+ + +K+ L E ++ + L + I N+ H VPV +
Sbjct: 62 EIGKLKAKKEDASALIQSTEEIKKRLAAKETEVQEAKGTLDAKLVTIGNIVHESVPVSDD 121
Query: 189 DCS-IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
+ + +I +T G + +K+H L K LDI + +V+G + YYLK+E V+L + L
Sbjct: 122 EANNLIVRTWGEKRM-EGNLKNHVDLCKMLDIVALEKGVDVAGGRGYYLKDEGVLLNLAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSI--EGADQCLIGTAEIP 305
IN+ L+ + KRGF P+ TP +R + KC Q + ++Y + +G ++ LI T+E P
Sbjct: 181 INFGLAFLRKRGFKPMQTPFFMRKETMGKCA-QLAQFDEELYKLTGDGEEKYLIATSEQP 239
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ H+ + + LP++YA +S CFR EAG+ G T G++RVHQF K+E F P ++
Sbjct: 240 LCAYHLGDRIYPAELPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDN 299
Query: 366 DSY--HEELIRIEEDLYSSLGLHFKLL 390
+S+ HEE+I+ ED Y +GL ++L+
Sbjct: 300 ESWEMHEEMIKNSEDFYKEIGLPYQLV 326
>gi|160946180|ref|ZP_02093391.1| hypothetical protein PEPMIC_00142 [Parvimonas micra ATCC 33270]
gi|158447703|gb|EDP24698.1| serine--tRNA ligase [Parvimonas micra ATCC 33270]
Length = 421
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 174/319 (54%), Gaps = 5/319 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D K IR NKE V ++ +R N N++ VLEL EK + EV+ + +N V+ ++ K
Sbjct: 2 LDIKRIRTNKEEVIESLNSRFGNYNIDKVLELDEKRREIIFEVENKKARQNEVSKQVPKL 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GEDCS 191
K + + +L +E K L + + L+ + L +E+++E IPN + D+P+G ED
Sbjct: 62 KKDGIDVSELFKEMKALSDEIKELDVKVKDLDEEIRKELLSIPNTPNKDIPIGKSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IRK + P F+F VK H+ LG LDI DF+ A ++SGS+F K LE LIN+
Sbjct: 122 EIRKFL-EPKKFDFEVKAHWDLGVDLDILDFERAVKISGSRFSVFKGLGAKLERALINFM 180
Query: 252 LSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHM 311
L +G+ + P ++ + + G P+ + Y + D L TAE+PV +
Sbjct: 181 LDLHSGQGYEEVGVPVLINRNSMYGTGQLPKFEDDMFY-VPSKDLFLAPTAEVPVTNLLA 239
Query: 312 DSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEE 371
+ IL LP Y AF++CFR EAG+AG TRGL R HQF K+EM F PE S E+
Sbjct: 240 NEILEFEKLPTYYTAFTYCFRQEAGSAGRDTRGLIRNHQFDKVEMVKFVNPENSYDELEK 299
Query: 372 LIRIEEDLYSSLGLHFKLL 390
L E++ L + ++++
Sbjct: 300 LTNDAEEILKLLEIPYRVV 318
>gi|116874111|ref|YP_850892.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466700|sp|A0AM81.1|SYS_LISW6 RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|116742989|emb|CAK22113.1| seryl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 427
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 174/320 (54%), Gaps = 5/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSN-ANLELVLELYEKMLNVQKEVDRLREERNAVANKM-K 132
+D K +R+N E V ++NR + E EL ++ + E + L+ +RN V+ ++ K
Sbjct: 2 LDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIAK 61
Query: 133 GKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCS 191
K E + IEE + + + + TL+ +L ++ ++L IPN+ H PVG ED +
Sbjct: 62 LKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILMSIPNIPHESTPVGESEDDN 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+ + G F+F K H+ LG LDI DF+ AA+V+GS+F + K LE LIN+
Sbjct: 122 VEIRKWGEVRTFDFEPKAHWDLGTDLDILDFENAAKVTGSRFVFYKKLGARLERALINFM 181
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ + G+ + P +V + + G P+ + IE D LI TAE+PV H
Sbjct: 182 MDLHSNEHGYEEMLPPYMVNRASMTGTGQLPK-FEEDAFLIEAEDYFLIPTAEVPVTNYH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL LP KY AFS CFR+EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 241 REDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYEALE 300
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
+L E++ L L +++L
Sbjct: 301 KLTSNAEEVLRRLELPYRVL 320
>gi|429217503|ref|YP_007175493.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429134032|gb|AFZ71044.1| seryl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
Length = 460
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 184/340 (54%), Gaps = 35/340 (10%)
Query: 80 IRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKGKLEPS 138
+R++ + + +I+ R + + + LEL K V E++ LR + N V++ + K +
Sbjct: 12 LRNDPDKLKESIKKRQMDTKIIDEALELDNKWRRVLTEINELRHKHNQVSSSI-AKAKND 70
Query: 139 ERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSIIRKTVG 198
E++KL+EE K L+ L E++L ++ ++ + + +PN+ DVP+GGE+ ++ + G
Sbjct: 71 EKKKLLEEAKELRNQLENAEKELNEIEEKRDKMLRNLPNIVLDDVPIGGEEATVPIRFWG 130
Query: 199 NPSVF------------------NFPVKDHFQLGKA------LDIFDFDAAAEVSGSKFY 234
V+ ++ + D+ +G A L + D A EVSGS+FY
Sbjct: 131 RAKVYKEYLDQFKEQTEKYGFKPDYEIIDYKPIGHADVLENVLKLGDTLKAGEVSGSRFY 190
Query: 235 YLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVR----SSVVEKCGFQPRGANTQVYS 290
YL ++ V L+ L+ + + + +G+T + P ++R +SV++ FQ +Y
Sbjct: 191 YLFDDIVWLDFALLFYAIDRLTSKGYTLVLPPYMLRYDIINSVIDLATFQ-----DAIYK 245
Query: 291 IEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQ 350
I+ D +I TAE P+ ++ + L + LP KY FS FR EAGA +G++RVHQ
Sbjct: 246 IDNEDLYMIATAEHPIAALYYNEELYDDELPKKYVGFSPAFRKEAGAGNRDLKGIFRVHQ 305
Query: 351 FSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F K+E F++ PE+S YHEELI E+++ LGL ++++
Sbjct: 306 FHKVEQFIYSLPEDSKKYHEELIMNSEEIFQGLGLPYRVV 345
>gi|419539785|ref|ZP_14079032.1| seryl-tRNA synthetase [Campylobacter coli Z163]
gi|419552550|ref|ZP_14090853.1| seryl-tRNA synthetase [Campylobacter coli 2692]
gi|419553946|ref|ZP_14092099.1| seryl-tRNA synthetase [Campylobacter coli 2698]
gi|419569667|ref|ZP_14106725.1| seryl-tRNA synthetase [Campylobacter coli 7--1]
gi|419604098|ref|ZP_14138572.1| seryl-tRNA synthetase [Campylobacter coli LMG 9853]
gi|419610571|ref|ZP_14144632.1| seryl-tRNA synthetase [Campylobacter coli H8]
gi|419612134|ref|ZP_14146016.1| seryl-tRNA synthetase [Campylobacter coli H9]
gi|419613862|ref|ZP_14147656.1| seryl-tRNA synthetase [Campylobacter coli H56]
gi|419616866|ref|ZP_14150501.1| seryl-tRNA synthetase [Campylobacter coli Z156]
gi|380518803|gb|EIA44894.1| seryl-tRNA synthetase [Campylobacter coli Z163]
gi|380531195|gb|EIA56227.1| seryl-tRNA synthetase [Campylobacter coli 2692]
gi|380533588|gb|EIA58510.1| seryl-tRNA synthetase [Campylobacter coli 2698]
gi|380548917|gb|EIA72806.1| seryl-tRNA synthetase [Campylobacter coli 7--1]
gi|380580749|gb|EIB02486.1| seryl-tRNA synthetase [Campylobacter coli LMG 9853]
gi|380589760|gb|EIB10801.1| seryl-tRNA synthetase [Campylobacter coli H8]
gi|380591010|gb|EIB12008.1| seryl-tRNA synthetase [Campylobacter coli H9]
gi|380593755|gb|EIB14575.1| seryl-tRNA synthetase [Campylobacter coli H56]
gi|380594780|gb|EIB15556.1| seryl-tRNA synthetase [Campylobacter coli Z156]
Length = 411
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + L E N++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLQNKKVDENI--LKNLAELFTNLKKEKASL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + + E K L +EL+ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKIKINEQNAKVNALENELETIAHAIPNIPDECVPVGEDEEE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V P F+F K+H LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVEIKKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V S + G P+ + +Y IE D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNSPTMFGTGQLPKFKD-DMYKIEDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSIFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMVECASDLLSSLGLAHRHLMLCTGDL 322
>gi|15834727|ref|NP_296486.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
gi|270284894|ref|ZP_06194288.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
gi|270288922|ref|ZP_06195224.1| seryl-tRNA synthetase [Chlamydia muridarum Weiss]
gi|13878799|sp|Q9PLJ7.1|SYS_CHLMU RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|7190137|gb|AAF38982.1| seryl-tRNA synthetase [Chlamydia muridarum Nigg]
Length = 428
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 174/322 (54%), Gaps = 5/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKM-KG 133
+D + IR + A ++ ++ + +LE +L+L + + ++ + + L R A++ ++ K
Sbjct: 2 LDIRLIRKEPKECEARLQKKDPSISLERLLDLDKNVRQLKADSESLLARRKALSGQIHKA 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDC-SI 192
K+ + LI+ + + LV E+ L + L +PN DVPV + +
Sbjct: 62 KVANEDATPLIQGVNAIADQLVAFEKTLQEQEALLLDLMARLPNYPDEDVPVSPDKSGNK 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
I K+ G F FP K H QL + L I DF A+ SGS + KNE V+LE L+ + L
Sbjct: 122 IIKSHGEIPTFTFPPKHHVQLNEKLQILDFKLPAKTSGSGWPAYKNEGVLLEWALLTYLL 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCL--IGTAEIPVGGIH 310
++ GF P +V+ ++ G P+ + Q Y +E +Q L I TAE+ + G H
Sbjct: 182 NKQQAHGFQLWLPPLLVKRDILFGSGQIPK-FDGQYYRVEDGEQSLFLIPTAEVVLNGFH 240
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+E LPL YAAF+ CFR EAGA G+ RGL RVHQF K+EMF F PE+ + ++
Sbjct: 241 SQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQFHKVEMFAFTTPEQEEIAYQ 300
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
++I I E++ S L L ++L L
Sbjct: 301 KMIGIVEEILSELQLPYQLSLL 322
>gi|374294504|ref|YP_005044695.1| seryl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359823998|gb|AEV66771.1| seryl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 423
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 176/320 (55%), Gaps = 6/320 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG- 133
ID K IR N E + + R N +++ VL L EK + EV++L+ ++N + +
Sbjct: 2 IDIKLIRSNPEILKKALLKRKENFDVDQVLSLDEKRRQILYEVEQLKNKQNTASKMIPAY 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG--EDCS 191
K E + +L+EE K+L + + TL+ + ++ +EL + IPN+ + VP G ED
Sbjct: 62 KKEGKDVTELMEEMKSLSDKIKTLDMQVREIDEELNKLLLTIPNIPNSTVPDGDSDEDNV 121
Query: 192 IIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
IR+ G P F+F K H+++G+ L I DF A++V+G++F + K LE L+N+
Sbjct: 122 EIRRW-GEPRKFDFEQKAHWEIGEKLGILDFSTASKVTGARFTFYKGLGARLERALMNFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L K G+ + P +V + + G P+ + + D LI TAE+PV ++
Sbjct: 181 LDLHTSKHGYIEVFPPFMVHRNSMIGTGQLPK-FEEDAFKVANTDYFLIPTAEVPVTNMY 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
+ IL LP+K+ A+S CFR EAGAAG TRGL R HQF+K+E+ F PE S E
Sbjct: 240 REQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L R E++ LG+ ++++
Sbjct: 300 SLTRDAEEVLQLLGIPYRVV 319
>gi|118443475|ref|YP_879284.1| seryl-tRNA synthetase [Clostridium novyi NT]
gi|166219868|sp|A0Q3T2.1|SYS_CLONN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|118133931|gb|ABK60975.1| seryl-tRNA synthetase [Clostridium novyi NT]
Length = 426
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 182/323 (56%), Gaps = 9/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRN---SNANLELVLELYEKMLNVQKEVDRLREERNAVANKM 131
+D K IR+N E + ++NR N ++ V+ L E+ + EV++L+ +RN+ ++++
Sbjct: 2 LDLKRIRNNPEEIKQIMQNRGEDFDNKLIDDVVALDERRRQILVEVEQLKSKRNSESSQI 61
Query: 132 -KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG--GE 188
K K E + ++ + K L + + + +L ++ ++++ IPN+ +P+VP G E
Sbjct: 62 GKLKKEGKDTSAIMADMKKLSDDIKAFDVELNEVDEKIKYIMLRIPNIPNPNVPDGETDE 121
Query: 189 DCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLI 248
D IRK G P+ F+F K H+ +G LDI DF+ +++GS+F K LE +I
Sbjct: 122 DNIEIRKW-GEPTKFDFESKAHWDIGTDLDILDFERGGKIAGSRFTVYKGLGARLERAII 180
Query: 249 NWTLS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
N+ L I G+T + P +V + G P+ + +E LI TAE+PV
Sbjct: 181 NYFLDMHTIDHGYTEILPPYMVNRDSMTGTGQLPK-FEEDAFKVENNGYFLIPTAEVPVT 239
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
++ + IL+ LP+K+AA+S CFR EAG+AG TRGL R HQF+K+E+ F +PE+S
Sbjct: 240 NMYRNEILNGDDLPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFVKPEQSYD 299
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
E+L ED+ LGL ++++
Sbjct: 300 ELEKLTNDAEDVLKGLGLPYRVV 322
>gi|402833692|ref|ZP_10882304.1| serine--tRNA ligase [Selenomonas sp. CM52]
gi|402279856|gb|EJU28631.1| serine--tRNA ligase [Selenomonas sp. CM52]
Length = 425
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 169/322 (52%), Gaps = 6/322 (1%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K++RD+ + V A + R + L EL EK + +E + L+ RN+V+ ++ K
Sbjct: 2 LDIKFVRDHIDEVQAMLEKRCNPLKLSGFKELEEKRRTLLQEAEELKARRNSVSKEIGAK 61
Query: 135 LEPSERQKLIE-EGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSI- 192
+ E I E + + + L+ ++ DEL IPNM DVPVG +D
Sbjct: 62 KKQGEDVTAISAEMREVGRKIADLDARTREVEDELHTILLNIPNMPKDDVPVGKDDTENP 121
Query: 193 -IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWT 251
+R+ G P F F K H+ LG LDI D + AA+V+G++F + K LE IN+
Sbjct: 122 EVRRW-GEPRKFTFEPKAHWDLGADLDILDAERAAKVTGARFTFYKGLGARLERACINFM 180
Query: 252 LS-EVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ K G+T + P I + + G P+ A ++ +EG D L+ TAE+P H
Sbjct: 181 MDLHATKHGYTEMLAPYIANEASMIGTGQLPKFAE-DMFKLEGLDYYLVPTAEVPTTNYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D IL LP +Y +++ CFR EAG+AG TRGL R HQF+K+E+ F +PE+S E
Sbjct: 240 RDEILDGRKLPERYTSYTACFRAEAGSAGRDTRGLIRQHQFNKVELIKFTKPEDSWDELE 299
Query: 371 ELIRIEEDLYSSLGLHFKLLLF 392
++ ED+ L + + ++L
Sbjct: 300 SMVDAAEDVLRILEIPYHVVLL 321
>gi|397771978|ref|YP_006539524.1| seryl-tRNA synthetase [Natrinema sp. J7-2]
gi|397681071|gb|AFO55448.1| seryl-tRNA synthetase [Natrinema sp. J7-2]
Length = 459
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 184/332 (55%), Gaps = 19/332 (5%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D +R+N + V + +R ++ +L+ LEL E+ ++ D LR +RN + ++ GK
Sbjct: 2 LDRTHLRENPDEVRDALDDRGADIDLDEFLELDERWRELKARGDDLRHDRNQITEQI-GK 60
Query: 135 L----EPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GED 189
L + ER++ I+ + LK + +EE+ V+L EL++ IP + H VP+G E
Sbjct: 61 LVAEGKDEEREEAIQRSRELKAEIEDVEEEAVELQAELRERMLEIPQLPHESVPLGVDER 120
Query: 190 CSIIRKTVGNPSVFNFP--VKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
++ + G P + H++LG+ LDI D + AA+ +G+ FY+LK E LE L
Sbjct: 121 HNVEDRRWGFDDAHELPEEITPHYELGEELDIIDEERAAKTTGAGFYFLKGEGAQLEHAL 180
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPR---------GANTQVYSIEGADQCL 298
I + + ++G+ L P V+S+ + G P+ G+N + Y+ + D L
Sbjct: 181 IQFMMDIHREQGYVDLFPPVPVKSTSMRGTGQLPKFADDAYRLGGSNEEEYADD--DLWL 238
Query: 299 IGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFV 358
TAE+PV ++ + IL + LPLK+ A++ FR EAG GT TRG+ RVHQF+K+E+
Sbjct: 239 CPTAEVPVTNMYRNEILLQDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVN 298
Query: 359 FCQPEESDSYHEELIRIEEDLYSSLGLHFKLL 390
F +P+ES E L+ ED+ LGL +++L
Sbjct: 299 FVEPDESYDRLENLLAEAEDVLKRLGLPYRIL 330
>gi|347532614|ref|YP_004839377.1| seryl-tRNA synthetase [Roseburia hominis A2-183]
gi|345502762|gb|AEN97445.1| seryl-tRNA synthetase [Roseburia hominis A2-183]
Length = 429
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 181/325 (55%), Gaps = 12/325 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELV---LELYEKMLNVQKEVDRLREERNAVANKM 131
ID K++R+N E V NI+N+ + L LV +EL + Q+E D LR +RN ++ ++
Sbjct: 2 IDLKFLRENPEVVKQNIKNKFQDHKLPLVDEVIELDAEARKTQQEADDLRAKRNQLSKEI 61
Query: 132 KGKLEPSERQKLIEEGKN-LKEGLV---TLEEDLVKLTDELQQEAQCIPNMTHPDVPVGG 187
GKL ++ E K + EG LEE +L +++ + IPN+ P VP+G
Sbjct: 62 -GKLMGQGKKDEAEAVKTQVAEGAARLAELEEKEKELQEKVTKIMMTIPNIIDPSVPIGK 120
Query: 188 ED-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMG 246
+D C++ + G P V +F + H ++ + + D DAA +V+G+ FYYL + +
Sbjct: 121 DDSCNVEIEKFGEPVVPDFEIPYHTEIMERFNGIDLDAAGKVAGNGFYYLMGDIARVHSA 180
Query: 247 LINWTLSEVIKRGFTPLTTPEIVRSSVVEKC-GFQPRGANTQVYSIEGADQCLIGTAEIP 305
++++ +I RGFT + P ++RS+VV F A +Y IEG D LIGT+E
Sbjct: 181 VLSYARDFMIDRGFTYVVPPFMIRSNVVTGVMSFDEMDA--MMYKIEGEDLYLIGTSEHS 238
Query: 306 VGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEES 365
+ G +D+I E LP ++S CFR E GA G RG+YR+HQF K EM V C+PEES
Sbjct: 239 MIGKFIDTINDEEKLPYTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEES 298
Query: 366 DSYHEELIRIEEDLYSSLGLHFKLL 390
++++L + DL+ SL + + L
Sbjct: 299 KMWYDKLWQNTVDLFRSLDIPVRTL 323
>gi|419536341|ref|ZP_14075823.1| seryl-tRNA synthetase [Campylobacter coli 111-3]
gi|419571382|ref|ZP_14108336.1| seryl-tRNA synthetase [Campylobacter coli 132-6]
gi|380518495|gb|EIA44590.1| seryl-tRNA synthetase [Campylobacter coli 111-3]
gi|380553740|gb|EIA77242.1| seryl-tRNA synthetase [Campylobacter coli 132-6]
Length = 411
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + L E N++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLQNKKVDENI--LKNLAELFTNLKKEKASL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + + E K L +EL+ A IPN+ VPVG E+
Sbjct: 59 LATAEDKESLK--AKLSENKIKINEQNAKVNALENELETIAHAIPNIPDECVPVGKDEEE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V P F+F K+H LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVEIKKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V S + G P+ + +Y IE D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNSPTMFGTGQLPKFKD-DMYKIEDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSIFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMVECASDLLSSLGLAHRHLMLCTGDL 322
>gi|156741477|ref|YP_001431606.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|189083582|sp|A7NJB8.1|SYS_ROSCS RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|156232805|gb|ABU57588.1| seryl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 424
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 172/319 (53%), Gaps = 9/319 (2%)
Query: 75 IDFKWIRDNKEAVSANI-RNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
+D + IR+ + V A + R A ++ VL E+ + +EV++L+ RNAV+ ++
Sbjct: 2 LDIRLIREQPDMVKAALGRAGVDPAQVDAVLAYDEQRRALLREVEKLKALRNAVSKEIGK 61
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVG-GEDCSI 192
+ ER I E + + + + L+ +L + + + N+ HP VP G E ++
Sbjct: 62 MSDAGERDTKIAEMRAVGDRIAALDRELAAVEERQYAALMELRNLPHPAVPDGPDETYNV 121
Query: 193 IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTL 252
+ G P F+F K H++LG+ALDI DF+ ++SGS+FY LK L+ LI W L
Sbjct: 122 VIAQEGEPRAFDFAPKPHWELGEALDIIDFERGVKLSGSRFYVLKGLGARLQRALIQWML 181
Query: 253 SEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMD 312
I++G+ + TP +V+ + P+ + +E D L+ TAE+PV +H D
Sbjct: 182 DLHIQQGYHEVYTPFVVKEQCMWGARQLPKFRDNLYRDVED-DLWLVPTAEVPVTNLHRD 240
Query: 313 SILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHEEL 372
IL LPL+Y A++ CFR E +AG RG+ R HQF K+EM++F P D+ ++EL
Sbjct: 241 EILEADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVHP---DTSYDEL 297
Query: 373 IRIEEDLYSS---LGLHFK 388
++ D ++ LGL F+
Sbjct: 298 EKLRADAEATCRLLGLTFR 316
>gi|348026150|ref|YP_004765955.1| seryl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822204|emb|CCC73128.1| seryl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 426
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 181/323 (56%), Gaps = 10/323 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVA---NKM 131
+D K+IR++ E V NI+NR++ A+++ + L + + ++V+ ++ ERN V +++
Sbjct: 2 LDTKFIREHAEEVKENIKNRHAKADVDAFVALDNQRREILQKVEAMKNERNTVTKEISQL 61
Query: 132 KGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCS 191
K E ++ Q I K L + + L++++ K+ +++ IPNM HP VPVG +D
Sbjct: 62 KRNKENADAQ--IAAMKKLGDDIDVLDKEVKKVEADMRAIQLMIPNMCHPSVPVGNDDSD 119
Query: 192 I--IRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLIN 249
+RK G P+ F+F +H+ +G+ L I D + AA+V+G++FYY LE + N
Sbjct: 120 NPEVRKW-GEPTKFDFQPLNHWDVGEKLGILDSERAAKVTGARFYYYIGAGARLERAVYN 178
Query: 250 WTLSE-VIKRGFTPLTTPEIVRSSVVEKCGFQPR-GANTQVYSIEGADQCLIGTAEIPVG 307
+ L + K G+T + P IV + G P+ + ++EG + +I TAE+P+
Sbjct: 179 FMLDQHTEKDGYTEVIPPYIVNRDSMTGTGQLPKFYEDMYKLNVEGEEMYMIPTAEVPLT 238
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
+ I+ + LP+ + A + CFR EAG+AG TRGL R HQF K+EM + PE S
Sbjct: 239 NYYRGEIIDGAKLPVYFTAMTPCFRAEAGSAGRDTRGLIRQHQFHKVEMVKYVAPETSYD 298
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++L ED+ +LGL + ++
Sbjct: 299 ELDKLTNNAEDILKALGLPYHVV 321
>gi|363899139|ref|ZP_09325650.1| seryl-tRNA synthetase [Oribacterium sp. ACB1]
gi|395209346|ref|ZP_10398440.1| serine--tRNA ligase [Oribacterium sp. ACB8]
gi|361959469|gb|EHL12756.1| seryl-tRNA synthetase [Oribacterium sp. ACB1]
gi|394704977|gb|EJF12506.1| serine--tRNA ligase [Oribacterium sp. ACB8]
Length = 439
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLE---LYEKMLNVQKEVDRLREERNAVANKM 131
+D K++R+N E V NI+ + + L LV E L + VQ E D LR ++N V+ ++
Sbjct: 2 LDIKFLRENPELVKENIKKKFQDEKLNLVDEVIGLDVEARKVQMEADELRSKKNQVSKQI 61
Query: 132 KGKLEPSERQKLIEEGKNL---KEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGE 188
+ E+++ + + + + L LEE L +E+ + IPNM VP+G +
Sbjct: 62 GALMAKGEKEEAEKIKEEVAAFSKRLAELEEKEPVLQEEIMKRMMVIPNMIDASVPIGKD 121
Query: 189 D-CSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGL 247
D C++ + G P V ++P+ H + ++ D DAA V+G+ FYYL + L +
Sbjct: 122 DSCNVENERFGEPLVPDYPIPYHADIMESFGGLDMDAAGRVAGNGFYYLVGDMARLHSAV 181
Query: 248 INWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVG 307
+++ +I RGFT + P ++RS VV+ + +Y IEG D LIGT+E +
Sbjct: 182 LSYARDFMIDRGFTYVIPPYMIRSKVVDGV-MSFAEMDAMMYKIEGEDLYLIGTSEHSMI 240
Query: 308 GIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDS 367
G +D IL + LPL ++S CFR E G+ G RG+YR+HQF K EM V C+P+++ +
Sbjct: 241 GRFIDQILPAASLPLTLTSYSPCFRKEKGSHGIEERGVYRIHQFEKQEMIVVCEPDDAMN 300
Query: 368 YHEELIRIEEDLYSSLGLHFKLL 390
++++L + D + SL + + L
Sbjct: 301 WYQKLWQNTVDFFRSLEIPVRTL 323
>gi|419687756|ref|ZP_14216091.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1854]
gi|380666587|gb|EIB82118.1| seryl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1854]
Length = 411
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 180/327 (55%), Gaps = 11/327 (3%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEVDRLREERNAVANKMKGK 134
+D K +++N + V+ ++N+ + N+ + +L E +++KE L EE A NK +
Sbjct: 2 LDLKNLQNNFDEVAKKLKNKKVDENI--LKKLAELFASLKKEKTAL-EEFQAFQNKFSKE 58
Query: 135 LEPSERQKLIEEGKNLKEGLVTLEEDLVK---LTDELQQEAQCIPNMTHPDVPVG-GEDC 190
L +E ++ ++ L E + E K L +EL++ A IPN+ VP G E+
Sbjct: 59 LATAEDKESLK--AKLSENKSKINEQSTKVNALENELEEIAHAIPNIPDECVPAGEDENE 116
Query: 191 SIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
++ K V NP F+F K+HF+LG++L+ DF ++S S+F LKNE +L L+N+
Sbjct: 117 NVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFCVLKNEGALLSRALVNY 176
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
+ RGF + P +V + + G P+ +Y ++ D LI T+EIPV ++
Sbjct: 177 MIDFNRSRGFEFVNVPFLVNGATMFGTGQLPK-FKEDMYKVDDEDLYLISTSEIPVTNLY 235
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
IL+ LP+K +S CFR EAG+AG TRG+ R HQF K+E+ +PE+SDS
Sbjct: 236 SGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFN 295
Query: 371 ELIRIEEDLYSSLGL-HFKLLLFLAEL 396
E++ DL SSLGL H L+L +L
Sbjct: 296 EMLECASDLLSSLGLAHRHLMLCTGDL 322
>gi|289706991|ref|ZP_06503326.1| serine--tRNA ligase [Micrococcus luteus SK58]
gi|289556316|gb|EFD49672.1| serine--tRNA ligase [Micrococcus luteus SK58]
Length = 427
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 174/320 (54%), Gaps = 7/320 (2%)
Query: 75 IDFKWIRDNKEAVSANIRNRNSNANL-ELVLELYEKMLNVQKEVDRLREERNAVANKMKG 133
ID K + + E A+ R +A+L + V+E + ++LR E+ A ++
Sbjct: 2 IDVKDLIEQPEKYRASQEARGEDASLVDRVVEADAARRSSIAGFEQLRAEQKAFGKRV-A 60
Query: 134 KLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPNMTHPDVPVGGEDCSII 193
+ + E+Q L+ E K+L + E L + + PN+ VP GGED ++
Sbjct: 61 QAKGEEKQALLAEVKDLAARVKEAESAAGAAEARLAELQRAFPNLIVDGVPAGGEDDFVV 120
Query: 194 RKTVGNPSVF---NFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINW 250
K VG P F F +DH +LG+ L D + A+VSG++F +LK LE+ L+
Sbjct: 121 LKEVGTPRDFAAEGFEPRDHLELGELLGAIDMERGAKVSGARFSFLKGVGARLELALMQL 180
Query: 251 TLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIH 310
L ++ GF P+ P +VR ++ GF + ++Y +E D L+GT+E+ + G H
Sbjct: 181 GLDLALENGFVPVIPPTLVRPETMQGTGFDVE-HDDEIYRLERDDLYLVGTSEVALAGYH 239
Query: 311 MDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMFVFCQPEESDSYHE 370
D I+ S P++YA +S C+R EAG+AG TRG+ RVHQF+KLEMF++ E++++ HE
Sbjct: 240 ADEIMDVSA-PVRYAGWSTCYRREAGSAGKDTRGIIRVHQFNKLEMFIYAAQEDAEAEHE 298
Query: 371 ELIRIEEDLYSSLGLHFKLL 390
L+ EE + ++ + ++++
Sbjct: 299 RLLAWEERMLGAIEVPYRVI 318
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,941,479,670
Number of Sequences: 23463169
Number of extensions: 248826007
Number of successful extensions: 824627
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5012
Number of HSP's successfully gapped in prelim test: 3081
Number of HSP's that attempted gapping in prelim test: 804578
Number of HSP's gapped (non-prelim): 8814
length of query: 396
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 251
effective length of database: 8,957,035,862
effective search space: 2248216001362
effective search space used: 2248216001362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)