BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>016053
MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVP
RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE
VIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV
LWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS
KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIK
EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL
VQNSQAWGECFGRITIEAMAFQLPVLVLSELHPSIW

High Scoring Gene Products

Symbol, full name Information P value
AT1G75420 protein from Arabidopsis thaliana 1.4e-133
AT1G19710 protein from Arabidopsis thaliana 3.5e-130
AT3G15940 protein from Arabidopsis thaliana 7.8e-20
AT1G52420 protein from Arabidopsis thaliana 1.0e-19

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  016053
        (396 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018392 - symbol:AT1G75420 species:3702 "Arabi...  1309  1.4e-133  1
TAIR|locus:2013089 - symbol:AT1G19710 species:3702 "Arabi...  1277  3.5e-130  1
TAIR|locus:2093925 - symbol:AT3G15940 species:3702 "Arabi...   187  7.8e-20   2
TAIR|locus:2018144 - symbol:AT1G52420 species:3702 "Arabi...   197  1.0e-19   2


>TAIR|locus:2018392 [details] [associations]
            symbol:AT1G75420 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISS]
            [GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
            "galactolipid biosynthetic process" evidence=RCA] [GO:0005768
            "endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
            InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0009058 GO:GO:0005768
            GO:GO:0016740 GO:GO:0005802 eggNOG:COG0438 CAZy:GT4
            HOGENOM:HOG000237742 ProtClustDB:CLSN2682518 EMBL:BT008621
            EMBL:AK229704 IPI:IPI00547866 RefSeq:NP_177675.1 UniGene:At.34777
            ProteinModelPortal:Q7Y217 PRIDE:Q7Y217 EnsemblPlants:AT1G75420.1
            GeneID:843878 KEGG:ath:AT1G75420 TAIR:At1g75420 InParanoid:Q7Y217
            OMA:AFHESLE PhylomeDB:Q7Y217 ArrayExpress:Q7Y217
            Genevestigator:Q7Y217 Uniprot:Q7Y217
        Length = 463

 Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
 Identities = 257/372 (69%), Positives = 297/372 (79%)

Query:    15 KRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVPRIATKSSPLSFMXX 74
             KRW L +L+ LS+ST     +R++ + C    +  ++K  +S +      +S+PL FM  
Sbjct:    10 KRWALMVLLFLSVSTVCMILVRSSFETCSISSQFVEEKNGESSAAK---FQSNPLDFMKS 66

Query:    75 XXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV 134
                          GGPLLLMELAFLLRGVG  V WIT QKP E+DEV+YSLEHKM DRGV
Sbjct:    67 KLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGV 126

Query:   135 QVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194
             QVISAKGQ+ ++T+LKADLIVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF  
Sbjct:   127 QVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRGHYFNA 186

Query:   195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR 254
             D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEVAED+VAKR
Sbjct:   187 DLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAEDSVAKR 246

Query:   255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVII 314
             VLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ES          VP++HAV++
Sbjct:   247 VLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVV 306

Query:   315 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374
             GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRI
Sbjct:   307 GSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRI 366

Query:   375 TIEAMAFQLPVL 386
             TIEAMAF+LPVL
Sbjct:   367 TIEAMAFKLPVL 378


>TAIR|locus:2013089 [details] [associations]
            symbol:AT1G19710 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISS]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
            to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
            process" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
            Pfam:PF00534 EMBL:CP002684 GO:GO:0005794 GO:GO:0009058
            GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 EMBL:BT029163
            EMBL:AK176210 EMBL:AK176263 IPI:IPI00537818 RefSeq:NP_173401.1
            UniGene:At.41737 UniGene:At.47209 ProteinModelPortal:Q67Z55
            PRIDE:Q67Z55 EnsemblPlants:AT1G19710.1 GeneID:838559
            KEGG:ath:AT1G19710 TAIR:At1g19710 HOGENOM:HOG000237742
            InParanoid:Q67Z55 OMA:SEVVWIT PhylomeDB:Q67Z55
            ProtClustDB:CLSN2682518 ArrayExpress:Q67Z55 Genevestigator:Q67Z55
            Uniprot:Q67Z55
        Length = 479

 Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
 Identities = 259/389 (66%), Positives = 296/389 (76%)

Query:     1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCD-RHLEVSDKKRVQSQ-S 58
             M K S + W     KRW L +L++LS+ST     +R+  D C       S +K   S   
Sbjct:     1 MAKPSTSMWATLQKKRWPLMILLVLSVSTVGMILVRSTFDSCSVSGKRCSREKEDNSDIK 60

Query:    59 VPRIATKSSPLSFMXXXXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEE 118
             +  ++   +PL FM               GGPLLLMELAFLLRGV ++V WIT QKP EE
Sbjct:    61 IQSVSGSLNPLEFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVESEVVWITNQKPVEE 120

Query:   119 DEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLP 178
             DEVI  LEHKM DRGVQVISAK Q+ I+TALK+DL+VLNTAVAGKWLDAVLK++VP+VLP
Sbjct:   121 DEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDLVVLNTAVAGKWLDAVLKDNVPKVLP 180

Query:   179 NVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG 238
              VLWWIHEMRGHYFK D VKHLP VAGAMIDSH TAEYWKNRT +RL IKMP TYVVHLG
Sbjct:   181 KVLWWIHEMRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYVVHLG 240

Query:   239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXX 298
             NSKELMEVAED+ AK VLRE VRESLGVRNED+LF IINSVSRGKGQDLFL +F+ES   
Sbjct:   241 NSKELMEVAEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKV 300

Query:   299 XXXXXXX-VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 357
                     VP++HAV++GSDM+AQTKFE+ELRN+V + K+Q  VHFVNKT+ VAPYLAAI
Sbjct:   301 IKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAI 360

Query:   358 DVLVQNSQAWGECFGRITIEAMAFQLPVL 386
             DVLVQNSQA GECFGRITIEAMAF+LPVL
Sbjct:   361 DVLVQNSQARGECFGRITIEAMAFKLPVL 389


>TAIR|locus:2093925 [details] [associations]
            symbol:AT3G15940 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISS]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
            to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
            process" evidence=RCA] InterPro:IPR001296 Pfam:PF00534
            GO:GO:0005794 EMBL:CP002686 GO:GO:0009058 GO:GO:0016740 CAZy:GT4
            EMBL:AB026653 EMBL:AY091763 EMBL:AJ507211 IPI:IPI00545618
            RefSeq:NP_001189906.1 RefSeq:NP_188215.1 UniGene:At.38967
            ProteinModelPortal:Q9LSB5 STRING:Q9LSB5 PRIDE:Q9LSB5
            EnsemblPlants:AT3G15940.1 EnsemblPlants:AT3G15940.2 GeneID:820838
            KEGG:ath:AT3G15940 TAIR:At3g15940 HOGENOM:HOG000090291
            InParanoid:Q9LSB5 OMA:QWFRSNR PhylomeDB:Q9LSB5
            ProtClustDB:CLSN2679727 Genevestigator:Q9LSB5 Uniprot:Q9LSB5
        Length = 697

 Score = 187 (70.9 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
 Identities = 58/217 (26%), Positives = 105/217 (48%)

Query:    88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
             G P+ +MELA  L   G  V  + + +          L  ++  R ++V+  KG+ +  T
Sbjct:   249 GAPISMMELASELLSCGATVYAVVLSRRG-------GLLQELTRRRIKVVEDKGELSFKT 301

Query:   148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
             A+KADL++  +AV   W+D  +    P     + WW+ E R  YF      LD VK L  
Sbjct:   302 AMKADLVIAGSAVCASWIDQYMDHH-PAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIF 360

Query:   203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDNVAKR-- 254
             ++       +T    ++ K R++  +  + + D   +V  + +S     + ++ + ++  
Sbjct:   361 LSEVQSKQWLTWCEEDHVKLRSQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQ 420

Query:   255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
              LRE VR   G+ ++D+L   ++S++ GKGQ L L S
Sbjct:   421 KLRESVRTEFGLTDKDMLVMSLSSINPGKGQLLLLES 457

 Score = 123 (48.4 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
 Identities = 30/74 (40%), Positives = 43/74 (58%)

Query:   314 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372
             +GS  N +  +  E+ +++     + + V +   T  VA   +A DV V NSQ  GE FG
Sbjct:   547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605

Query:   373 RITIEAMAFQLPVL 386
             R+TIEAMA+ LPVL
Sbjct:   606 RVTIEAMAYGLPVL 619

 Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query:   249 DNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK 283
             ++VA  + RE  +E +  RN+  +   +N + + K
Sbjct:   456 ESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEK 490

 Score = 38 (18.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query:   232 TYVVHLGNSKEL-MEVA--EDNVAKR 254
             T +VHLG +K + + +A  ED+ ++R
Sbjct:   124 TNIVHLGVNKRMHVTLAKKEDSTSRR 149


>TAIR|locus:2018144 [details] [associations]
            symbol:AT1G52420 species:3702 "Arabidopsis thaliana"
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISS]
            [GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
            "galactolipid biosynthetic process" evidence=RCA]
            InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009058 GO:GO:0016740 EMBL:AC037424
            eggNOG:COG0438 CAZy:GT4 EMBL:AC008016 HOGENOM:HOG000090291
            ProtClustDB:CLSN2679727 EMBL:BT002514 EMBL:BT008418 EMBL:AK227148
            IPI:IPI00539314 PIR:E96564 RefSeq:NP_175651.1 UniGene:At.43422
            ProteinModelPortal:Q9SSP6 PaxDb:Q9SSP6 PRIDE:Q9SSP6
            EnsemblPlants:AT1G52420.1 GeneID:841673 KEGG:ath:AT1G52420
            TAIR:At1g52420 InParanoid:Q9SSP6 OMA:CEEEHIK PhylomeDB:Q9SSP6
            ArrayExpress:Q9SSP6 Genevestigator:Q9SSP6 Uniprot:Q9SSP6
        Length = 670

 Score = 197 (74.4 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 62/217 (28%), Positives = 107/217 (49%)

Query:    88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
             G P+ +MELA  L   G  V+ + + +          L  ++  R ++V+  KG+ +  T
Sbjct:   247 GAPISMMELASELLSCGATVSAVVLSRRG-------GLMQELSRRRIKVVEDKGELSFKT 299

Query:   148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
             A+KADLI+  +AV   W+D  +    P     + WWI E R  YF      LD VK L  
Sbjct:   300 AMKADLIIAGSAVCTSWIDQYMNHH-PAGGSQIAWWIMENRREYFDRAKPVLDRVKMLIF 358

Query:   203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDN--VAKR 254
             ++ +     +T    E+ K R++  +  + + D   +V  + +S     ++ +   V ++
Sbjct:   359 LSESQSRQWLTWCEEEHIKLRSQPVIVPLSVNDELAFVAGIPSSLNTPTLSPEKMRVKRQ 418

Query:   255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
             +LRE VR  LG+ + D+L   ++S++  KGQ L L S
Sbjct:   419 ILRESVRTELGITDSDMLVMSLSSINPTKGQLLLLES 455

 Score = 110 (43.8 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
 Identities = 28/74 (37%), Positives = 41/74 (55%)

Query:   314 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372
             +GS  N +  +  E+ +++     +   V +   T  VA   +A DV V NSQ  GE FG
Sbjct:   520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578

Query:   373 RITIEAMAFQLPVL 386
             R+TIEAMA+ L V+
Sbjct:   579 RVTIEAMAYGLAVV 592


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      396       371   0.00086  117 3  11 22  0.50    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  248 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.72u 0.19s 29.91t   Elapsed:  00:00:02
  Total cpu time:  29.72u 0.19s 29.91t   Elapsed:  00:00:02
  Start:  Fri May 10 06:16:10 2013   End:  Fri May 10 06:16:12 2013

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