Query 016053
Match_columns 396
No_of_seqs 225 out of 1941
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 07:05:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 2.1E-35 7.3E-40 285.7 26.6 300 73-394 1-366 (439)
2 3c48_A Predicted glycosyltrans 100.0 5.9E-35 2E-39 283.1 23.3 298 69-394 15-361 (438)
3 3okp_A GDP-mannose-dependent a 100.0 5.2E-35 1.8E-39 279.1 20.8 287 71-395 1-316 (394)
4 2x6q_A Trehalose-synthase TRET 100.0 4.2E-35 1.4E-39 282.3 19.7 294 71-394 37-351 (416)
5 2r60_A Glycosyl transferase, g 100.0 4.9E-35 1.7E-39 288.5 18.9 300 74-394 7-394 (499)
6 2jjm_A Glycosyl transferase, g 100.0 2.9E-33 1E-37 267.5 25.2 281 76-395 17-321 (394)
7 1rzu_A Glycogen synthase 1; gl 100.0 9.8E-34 3.4E-38 278.2 21.4 299 75-394 1-401 (485)
8 2iw1_A Lipopolysaccharide core 100.0 6.5E-34 2.2E-38 269.7 16.9 282 75-394 1-306 (374)
9 2qzs_A Glycogen synthase; glyc 100.0 5.1E-33 1.7E-37 273.1 23.6 298 75-394 1-402 (485)
10 3oy2_A Glycosyltransferase B73 100.0 2.6E-33 9E-38 269.4 20.4 289 75-394 1-309 (413)
11 3vue_A GBSS-I, granule-bound s 100.0 9E-32 3.1E-36 265.7 25.3 303 74-394 9-437 (536)
12 2iuy_A Avigt4, glycosyltransfe 100.0 1.4E-32 4.9E-37 257.7 18.0 250 72-394 1-277 (342)
13 2gek_A Phosphatidylinositol ma 100.0 1.2E-30 4E-35 250.0 17.9 283 71-394 17-319 (406)
14 3s28_A Sucrose synthase 1; gly 100.0 1.5E-30 5.2E-35 265.3 15.1 307 74-394 278-700 (816)
15 2x0d_A WSAF; GT4 family, trans 100.0 3.8E-28 1.3E-32 232.9 22.3 274 73-391 45-347 (413)
16 2vsy_A XCC0866; transferase, g 99.9 4.2E-27 1.4E-31 235.5 19.9 272 71-391 202-492 (568)
17 1f0k_A MURG, UDP-N-acetylgluco 99.9 9.7E-26 3.3E-30 212.8 24.7 252 75-393 7-285 (364)
18 2hy7_A Glucuronosyltransferase 99.9 9.5E-26 3.2E-30 216.2 15.0 258 73-390 13-323 (406)
19 1uqt_A Alpha, alpha-trehalose- 99.9 7.9E-23 2.7E-27 198.7 18.9 156 230-394 219-392 (482)
20 3beo_A UDP-N-acetylglucosamine 99.9 3.6E-23 1.2E-27 195.9 15.5 279 68-393 2-313 (375)
21 3nb0_A Glycogen [starch] synth 99.9 3.5E-22 1.2E-26 195.6 18.3 235 149-394 180-554 (725)
22 1vgv_A UDP-N-acetylglucosamine 99.9 5E-22 1.7E-26 188.7 18.7 278 75-393 1-313 (384)
23 2bfw_A GLGA glycogen synthase; 99.9 1.2E-22 4E-27 175.2 12.9 141 235-393 2-150 (200)
24 3t5t_A Putative glycosyltransf 99.9 5.8E-21 2E-25 183.7 16.3 226 150-394 149-410 (496)
25 2xci_A KDO-transferase, 3-deox 99.9 2.5E-20 8.4E-25 176.5 19.4 255 76-392 42-313 (374)
26 1v4v_A UDP-N-acetylglucosamine 99.8 8.3E-21 2.8E-25 179.9 13.6 268 75-393 6-305 (376)
27 2f9f_A First mannosyl transfer 99.8 1.4E-20 4.7E-25 159.2 8.1 112 264-393 17-132 (177)
28 3qhp_A Type 1 capsular polysac 99.8 2.5E-20 8.7E-25 155.6 9.5 107 270-394 2-112 (166)
29 3dzc_A UDP-N-acetylglucosamine 99.7 2E-16 6.8E-21 150.7 20.3 283 69-392 20-337 (396)
30 3s2u_A UDP-N-acetylglucosamine 99.7 5.4E-15 1.8E-19 139.3 21.1 255 74-393 2-283 (365)
31 3ot5_A UDP-N-acetylglucosamine 99.7 2.5E-15 8.4E-20 143.3 17.4 274 71-392 24-331 (403)
32 3otg_A CALG1; calicheamicin, T 99.6 2.2E-14 7.5E-19 137.2 18.1 98 268-392 241-338 (412)
33 3rhz_A GTF3, nucleotide sugar 99.6 3.9E-14 1.3E-18 131.3 14.8 237 86-394 24-276 (339)
34 4fzr_A SSFS6; structural genom 99.5 2.2E-14 7.6E-19 136.7 9.0 94 268-391 226-329 (398)
35 2iyf_A OLED, oleandomycin glyc 99.5 2.8E-13 9.6E-18 130.4 16.1 98 268-392 231-329 (430)
36 3oti_A CALG3; calicheamicin, T 99.5 6.8E-13 2.3E-17 126.4 15.4 96 268-390 231-327 (398)
37 3tsa_A SPNG, NDP-rhamnosyltran 99.5 4.4E-13 1.5E-17 127.3 13.4 98 268-391 217-315 (391)
38 3ia7_A CALG4; glycosysltransfe 99.5 1.6E-12 5.3E-17 123.8 16.8 95 268-390 230-325 (402)
39 4hwg_A UDP-N-acetylglucosamine 99.4 1.8E-11 6E-16 115.7 18.8 268 75-391 10-310 (385)
40 3rsc_A CALG2; TDP, enediyne, s 99.4 3.1E-11 1.1E-15 115.4 19.0 95 268-390 246-341 (415)
41 2p6p_A Glycosyl transferase; X 99.3 2.5E-10 8.7E-15 107.9 19.4 93 268-391 209-308 (384)
42 3q3e_A HMW1C-like glycosyltran 99.2 3.5E-09 1.2E-13 103.7 22.9 115 261-391 430-550 (631)
43 3h4t_A Glycosyltransferase GTF 99.1 2.2E-09 7.4E-14 102.3 16.5 94 268-392 220-314 (404)
44 2iya_A OLEI, oleandomycin glyc 99.0 2.4E-08 8.1E-13 95.6 20.2 96 268-391 254-350 (424)
45 2yjn_A ERYCIII, glycosyltransf 99.0 6.2E-10 2.1E-14 107.4 8.1 93 269-391 267-364 (441)
46 4amg_A Snogd; transferase, pol 98.9 2.1E-08 7.3E-13 95.0 15.0 98 268-392 236-334 (400)
47 1iir_A Glycosyltransferase GTF 98.8 1.2E-07 4.2E-12 90.4 17.2 92 269-392 238-331 (415)
48 1rrv_A Glycosyltransferase GTF 98.8 2.1E-07 7E-12 88.9 16.3 91 269-391 237-331 (416)
49 2o6l_A UDP-glucuronosyltransfe 98.6 1.3E-07 4.5E-12 78.4 7.9 91 268-391 20-115 (170)
50 3hbm_A UDP-sugar hydrolase; PS 98.6 3.2E-06 1.1E-10 75.7 17.2 240 75-390 1-252 (282)
51 2c4m_A Glycogen phosphorylase; 98.5 3.9E-06 1.3E-10 84.1 17.8 130 260-390 504-648 (796)
52 1l5w_A Maltodextrin phosphoryl 98.5 4.3E-06 1.5E-10 83.8 16.7 130 260-391 514-659 (796)
53 2gj4_A Glycogen phosphorylase, 98.3 1.2E-05 4E-10 81.0 16.6 131 260-391 538-683 (824)
54 4gyw_A UDP-N-acetylglucosamine 98.1 9.8E-06 3.4E-10 82.5 11.1 114 260-389 513-629 (723)
55 3tov_A Glycosyl transferase fa 97.8 0.0035 1.2E-07 57.9 21.7 110 258-389 173-287 (349)
56 2gt1_A Lipopolysaccharide hept 97.5 0.015 5.2E-07 52.9 21.0 102 264-388 173-278 (326)
57 1psw_A ADP-heptose LPS heptosy 97.5 0.00044 1.5E-08 63.8 10.3 112 257-389 167-287 (348)
58 3l7i_A Teichoic acid biosynthe 97.4 0.0079 2.7E-07 61.4 19.3 260 73-388 351-640 (729)
59 2jzc_A UDP-N-acetylglucosamine 96.5 0.0036 1.2E-07 53.7 5.6 46 340-391 115-161 (224)
60 1ygp_A Yeast glycogen phosphor 95.3 0.39 1.3E-05 48.6 15.0 131 260-391 582-742 (879)
61 2acv_A Triterpene UDP-glucosyl 94.1 0.26 8.8E-06 47.2 10.2 103 268-391 275-379 (463)
62 2c1x_A UDP-glucose flavonoid 3 93.7 0.083 2.9E-06 50.5 5.9 46 339-391 325-372 (456)
63 3hbf_A Flavonoid 3-O-glucosylt 93.6 0.35 1.2E-05 46.1 10.1 102 268-391 272-374 (454)
64 2pq6_A UDP-glucuronosyl/UDP-gl 93.5 0.32 1.1E-05 46.8 9.8 102 268-391 294-400 (482)
65 2bw0_A 10-FTHFDH, 10-formyltet 87.7 1.5 5.2E-05 39.6 7.8 78 72-158 20-107 (329)
66 3e8x_A Putative NAD-dependent 87.4 1.8 6.1E-05 36.7 7.8 75 69-158 16-92 (236)
67 2vch_A Hydroquinone glucosyltr 87.3 2.4 8.1E-05 40.6 9.3 38 75-114 7-45 (480)
68 3nva_A CTP synthase; rossman f 87.2 22 0.00074 34.1 16.5 168 202-390 206-387 (535)
69 4gi5_A Quinone reductase; prot 85.8 1.3 4.4E-05 39.1 6.0 41 71-111 19-60 (280)
70 3q0i_A Methionyl-tRNA formyltr 82.9 2.9 0.0001 37.5 7.2 81 71-158 4-93 (318)
71 2a5l_A Trp repressor binding p 81.3 2.1 7.2E-05 35.2 5.3 40 72-112 3-42 (200)
72 2phj_A 5'-nucleotidase SURE; S 79.6 4.7 0.00016 34.7 6.9 37 75-115 2-38 (251)
73 1fy2_A Aspartyl dipeptidase; s 79.6 5.5 0.00019 33.8 7.4 96 285-391 17-122 (229)
74 2zki_A 199AA long hypothetical 79.4 2 6.8E-05 35.4 4.5 38 73-112 3-40 (199)
75 2l2q_A PTS system, cellobiose- 77.8 12 0.00042 27.3 8.1 74 311-389 8-83 (109)
76 1e2b_A Enzyme IIB-cellobiose; 77.4 10 0.00035 27.7 7.4 54 310-365 6-59 (106)
77 3rc1_A Sugar 3-ketoreductase; 77.0 8.9 0.0003 34.8 8.6 88 70-172 23-113 (350)
78 1ydw_A AX110P-like protein; st 76.3 24 0.00083 31.9 11.4 96 269-389 5-102 (362)
79 3n7t_A Macrophage binding prot 75.7 4.6 0.00016 34.8 5.8 42 74-115 9-59 (247)
80 3auf_A Glycinamide ribonucleot 74.6 16 0.00055 30.9 8.9 75 74-159 22-110 (229)
81 3av3_A Phosphoribosylglycinami 73.7 13 0.00046 31.0 8.1 73 75-158 4-90 (212)
82 3kkl_A Probable chaperone prot 73.2 5.7 0.00019 34.1 5.8 44 72-115 1-53 (244)
83 3h75_A Periplasmic sugar-bindi 73.2 50 0.0017 29.3 20.0 42 72-113 1-43 (350)
84 3e9m_A Oxidoreductase, GFO/IDH 72.9 28 0.00097 31.0 10.8 93 270-390 5-99 (330)
85 2q62_A ARSH; alpha/beta, flavo 72.8 9.7 0.00033 32.7 7.2 41 71-111 31-72 (247)
86 3llv_A Exopolyphosphatase-rela 72.6 10 0.00034 28.9 6.7 70 74-159 6-79 (141)
87 2wqk_A 5'-nucleotidase SURE; S 72.5 9.1 0.00031 33.0 6.9 37 74-115 1-38 (251)
88 4ds3_A Phosphoribosylglycinami 72.0 13 0.00044 31.0 7.5 77 71-158 4-94 (209)
89 2ywr_A Phosphoribosylglycinami 71.8 17 0.00057 30.5 8.3 74 75-159 2-89 (216)
90 2xj4_A MIPZ; replication, cell 71.8 5 0.00017 35.2 5.3 42 72-113 1-42 (286)
91 2vzf_A NADH-dependent FMN redu 71.4 6.6 0.00023 32.2 5.7 39 74-112 2-42 (197)
92 3eag_A UDP-N-acetylmuramate:L- 70.7 33 0.0011 30.6 10.6 86 75-174 5-92 (326)
93 3p0r_A Azoreductase; structura 70.5 5.9 0.0002 33.1 5.2 38 74-111 4-46 (211)
94 3u3x_A Oxidoreductase; structu 70.0 26 0.00088 31.8 9.9 92 270-389 26-119 (361)
95 1xv5_A AGT, DNA alpha-glucosyl 69.4 24 0.00081 29.2 8.3 275 75-386 2-321 (401)
96 1e2b_A Enzyme IIB-cellobiose; 69.3 9.1 0.00031 28.0 5.4 40 72-113 1-40 (106)
97 3zqu_A Probable aromatic acid 69.2 6.7 0.00023 32.8 5.1 38 73-113 3-40 (209)
98 1l5x_A SurviVal protein E; str 68.8 13 0.00043 32.6 7.0 36 75-115 1-37 (280)
99 4had_A Probable oxidoreductase 68.6 15 0.00051 33.1 7.9 95 268-389 21-117 (350)
100 1ydg_A Trp repressor binding p 68.1 7.6 0.00026 32.2 5.4 38 74-112 6-43 (211)
101 3o74_A Fructose transport syst 67.9 54 0.0019 27.6 17.8 210 74-347 2-215 (272)
102 3ius_A Uncharacterized conserv 67.7 13 0.00044 32.2 7.1 67 74-158 5-71 (286)
103 2pq6_A UDP-glucuronosyl/UDP-gl 67.6 4.9 0.00017 38.4 4.6 38 73-112 7-44 (482)
104 1kjn_A MTH0777; hypotethical p 67.3 13 0.00045 28.9 5.9 38 75-112 7-44 (157)
105 1d4a_A DT-diaphorase, quinone 67.2 9.7 0.00033 33.2 6.1 37 75-111 3-40 (273)
106 3tqq_A Methionyl-tRNA formyltr 67.1 9.4 0.00032 34.1 6.0 78 74-158 2-88 (314)
107 1jzt_A Hypothetical 27.5 kDa p 66.7 8 0.00027 33.2 5.3 36 75-113 59-94 (246)
108 3qvo_A NMRA family protein; st 66.2 16 0.00053 30.7 7.1 37 71-113 20-57 (236)
109 3mcu_A Dipicolinate synthase, 66.2 7.3 0.00025 32.5 4.8 40 72-115 3-44 (207)
110 4f3y_A DHPR, dihydrodipicolina 65.9 12 0.00043 32.6 6.4 43 348-392 65-107 (272)
111 3e3m_A Transcriptional regulat 65.9 73 0.0025 28.3 17.7 216 73-348 69-287 (355)
112 2hy5_A Putative sulfurtransfer 65.7 14 0.00047 28.0 6.0 38 75-112 1-40 (130)
113 3dfz_A SIRC, precorrin-2 dehyd 65.3 22 0.00077 29.9 7.7 72 72-159 29-100 (223)
114 3moi_A Probable dehydrogenase; 65.2 26 0.00088 32.1 8.9 69 307-390 26-96 (387)
115 3l6u_A ABC-type sugar transpor 65.1 65 0.0022 27.5 17.5 215 73-347 7-228 (293)
116 3g1w_A Sugar ABC transporter; 64.7 68 0.0023 27.6 19.0 227 73-358 3-234 (305)
117 3f6r_A Flavodoxin; FMN binding 64.7 9.8 0.00033 29.4 5.1 37 75-112 2-38 (148)
118 3i6i_A Putative leucoanthocyan 64.7 23 0.00079 31.6 8.4 96 72-175 8-114 (346)
119 3slg_A PBGP3 protein; structur 64.4 13 0.00046 33.6 6.8 75 69-157 19-98 (372)
120 2f62_A Nucleoside 2-deoxyribos 64.3 20 0.00069 28.4 6.9 40 351-390 62-106 (161)
121 2d1p_A TUSD, hypothetical UPF0 64.3 13 0.00046 28.7 5.7 37 75-111 13-51 (140)
122 2b69_A UDP-glucuronate decarbo 64.2 29 0.00098 30.9 8.9 37 71-113 24-60 (343)
123 3rfo_A Methionyl-tRNA formyltr 63.9 11 0.00039 33.6 6.0 79 73-158 3-90 (317)
124 1rw7_A YDR533CP; alpha-beta sa 63.8 12 0.00041 31.9 5.9 43 73-115 2-53 (243)
125 4hkt_A Inositol 2-dehydrogenas 63.4 41 0.0014 29.9 9.7 68 307-390 26-95 (331)
126 4a8p_A Putrescine carbamoyltra 63.2 33 0.0011 31.1 8.8 77 72-157 151-227 (355)
127 4a8t_A Putrescine carbamoyltra 63.2 32 0.0011 30.9 8.7 77 72-157 173-249 (339)
128 3cea_A MYO-inositol 2-dehydrog 63.0 52 0.0018 29.3 10.5 95 268-389 6-102 (346)
129 1qzu_A Hypothetical protein MD 62.4 7.6 0.00026 32.4 4.2 39 72-114 17-57 (206)
130 3ijp_A DHPR, dihydrodipicolina 62.3 11 0.00038 33.2 5.4 43 348-392 80-122 (288)
131 3rof_A Low molecular weight pr 62.1 18 0.0006 28.7 6.1 87 71-160 3-93 (158)
132 3evn_A Oxidoreductase, GFO/IDH 62.1 21 0.00072 31.8 7.5 93 270-390 5-99 (329)
133 2qv7_A Diacylglycerol kinase D 62.0 15 0.00053 33.0 6.6 44 71-114 21-65 (337)
134 1j9j_A Stationary phase surviV 61.8 20 0.00069 30.7 6.8 36 75-115 1-37 (247)
135 3n8i_A Low molecular weight ph 61.7 11 0.00038 29.8 4.9 86 71-160 2-94 (157)
136 1bg6_A N-(1-D-carboxylethyl)-L 61.7 14 0.00049 33.2 6.4 34 71-111 1-34 (359)
137 4dim_A Phosphoribosylglycinami 61.6 29 0.001 31.8 8.6 35 71-112 4-38 (403)
138 2d1p_B TUSC, hypothetical UPF0 61.3 14 0.00047 27.6 5.2 39 75-113 2-41 (119)
139 4fb5_A Probable oxidoreductase 61.2 16 0.00055 33.3 6.8 99 269-388 24-124 (393)
140 3nbm_A PTS system, lactose-spe 61.2 16 0.00054 26.8 5.3 76 308-389 6-85 (108)
141 3gem_A Short chain dehydrogena 61.0 17 0.00059 31.2 6.5 33 76-113 28-60 (260)
142 3qjg_A Epidermin biosynthesis 60.8 10 0.00035 30.6 4.6 37 74-114 5-42 (175)
143 3gpi_A NAD-dependent epimerase 60.5 8.7 0.0003 33.4 4.6 35 72-113 1-35 (286)
144 3h5o_A Transcriptional regulat 60.4 89 0.003 27.5 17.8 41 73-113 61-101 (339)
145 3ec7_A Putative dehydrogenase; 60.4 43 0.0015 30.2 9.4 90 69-172 18-111 (357)
146 3u7r_A NADPH-dependent FMN red 60.3 12 0.00041 30.7 5.0 38 74-111 2-39 (190)
147 1d1q_A Tyrosine phosphatase (E 60.2 21 0.00071 28.3 6.3 85 71-159 4-96 (161)
148 4b4o_A Epimerase family protei 60.0 9.9 0.00034 33.3 4.8 33 75-113 1-33 (298)
149 2ew2_A 2-dehydropantoate 2-red 60.0 20 0.00069 31.4 7.0 33 73-112 2-34 (316)
150 3q2i_A Dehydrogenase; rossmann 59.9 60 0.002 29.1 10.3 94 268-389 11-106 (354)
151 2hy5_B Intracellular sulfur ox 59.9 15 0.0005 28.3 5.2 39 75-113 6-45 (136)
152 2rk3_A Protein DJ-1; parkinson 59.9 33 0.0011 27.9 7.8 76 72-160 1-76 (197)
153 1u7z_A Coenzyme A biosynthesis 59.8 50 0.0017 27.8 8.9 23 91-113 35-57 (226)
154 3dty_A Oxidoreductase, GFO/IDH 59.8 81 0.0028 28.8 11.3 70 307-388 38-115 (398)
155 3b6i_A Flavoprotein WRBA; flav 59.8 13 0.00043 30.3 5.2 38 75-113 2-40 (198)
156 3uuw_A Putative oxidoreductase 59.5 25 0.00085 31.0 7.5 68 307-389 30-97 (308)
157 3tem_A Ribosyldihydronicotinam 59.4 13 0.00044 31.5 5.2 38 75-112 2-40 (228)
158 3v5n_A Oxidoreductase; structu 59.3 79 0.0027 29.2 11.2 71 307-389 63-141 (417)
159 1jx7_A Hypothetical protein YC 59.2 16 0.00055 26.7 5.2 39 75-113 2-43 (117)
160 4e3z_A Putative oxidoreductase 59.2 12 0.00043 32.2 5.3 37 72-113 23-59 (272)
161 3egc_A Putative ribose operon 58.9 85 0.0029 26.7 17.2 213 73-347 7-222 (291)
162 3euw_A MYO-inositol dehydrogen 58.7 42 0.0014 30.0 9.0 69 307-390 27-97 (344)
163 1pvv_A Otcase, ornithine carba 58.6 44 0.0015 29.7 8.7 78 73-158 154-231 (315)
164 3jvi_A Protein tyrosine phosph 58.3 17 0.00057 28.9 5.4 84 72-159 2-92 (161)
165 3q98_A Transcarbamylase; rossm 58.1 45 0.0015 30.8 8.9 87 73-161 190-277 (399)
166 1zq6_A Otcase, ornithine carba 58.0 95 0.0033 28.1 10.9 91 257-364 176-273 (359)
167 3qxc_A Dethiobiotin synthetase 57.9 16 0.00056 31.1 5.7 41 71-111 17-57 (242)
168 3r6w_A FMN-dependent NADH-azor 57.9 11 0.00037 31.3 4.5 37 75-111 2-42 (212)
169 3en0_A Cyanophycinase; serine 57.8 49 0.0017 29.0 8.9 84 307-391 55-154 (291)
170 3m9w_A D-xylose-binding peripl 57.5 94 0.0032 26.8 16.0 218 74-348 2-223 (313)
171 1zh8_A Oxidoreductase; TM0312, 57.4 34 0.0012 30.6 8.1 95 268-389 16-113 (340)
172 1pjq_A CYSG, siroheme synthase 57.0 66 0.0023 30.2 10.3 86 73-174 11-99 (457)
173 2fzv_A Putative arsenical resi 56.8 16 0.00056 31.9 5.6 40 72-111 56-96 (279)
174 3mz0_A Inositol 2-dehydrogenas 56.8 39 0.0013 30.2 8.4 70 307-389 26-97 (344)
175 4hs4_A Chromate reductase; tri 56.7 8.8 0.0003 31.7 3.7 40 71-111 3-44 (199)
176 4e21_A 6-phosphogluconate dehy 56.6 17 0.00058 33.1 5.9 73 71-161 19-92 (358)
177 1sqs_A Conserved hypothetical 56.5 15 0.00052 31.1 5.3 37 75-111 2-40 (242)
178 2hpv_A FMN-dependent NADH-azor 56.4 15 0.00053 30.1 5.2 38 75-112 2-44 (208)
179 3gd5_A Otcase, ornithine carba 56.2 33 0.0011 30.6 7.5 79 73-159 156-234 (323)
180 3lqk_A Dipicolinate synthase s 56.1 13 0.00044 30.8 4.5 40 72-115 5-46 (201)
181 1id1_A Putative potassium chan 55.9 13 0.00045 28.8 4.4 76 72-159 1-80 (153)
182 1tvm_A PTS system, galactitol- 55.9 11 0.00038 27.9 3.7 54 311-365 25-78 (113)
183 4gqa_A NAD binding oxidoreduct 55.9 55 0.0019 30.1 9.5 102 268-389 24-127 (412)
184 4ffl_A PYLC; amino acid, biosy 55.8 20 0.00069 32.4 6.3 33 74-113 1-33 (363)
185 3lk7_A UDP-N-acetylmuramoylala 55.5 53 0.0018 30.8 9.4 91 72-176 7-100 (451)
186 3da8_A Probable 5'-phosphoribo 55.3 35 0.0012 28.5 7.1 74 73-158 11-97 (215)
187 3ouz_A Biotin carboxylase; str 55.1 13 0.00043 35.0 4.9 35 71-112 3-37 (446)
188 3gk3_A Acetoacetyl-COA reducta 55.1 17 0.00058 31.2 5.5 36 73-113 23-58 (269)
189 1p9l_A Dihydrodipicolinate red 54.9 56 0.0019 27.8 8.6 72 310-391 2-78 (245)
190 1vlv_A Otcase, ornithine carba 54.6 43 0.0015 29.9 8.0 80 73-159 166-245 (325)
191 1vs1_A 3-deoxy-7-phosphoheptul 54.5 1E+02 0.0036 26.7 10.3 103 276-392 42-155 (276)
192 2i6u_A Otcase, ornithine carba 54.4 47 0.0016 29.4 8.2 80 73-159 147-226 (307)
193 3oid_A Enoyl-[acyl-carrier-pro 54.0 17 0.00059 31.1 5.3 35 74-113 3-37 (258)
194 3ty2_A 5'-nucleotidase SURE; s 53.8 16 0.00056 31.5 4.9 39 73-115 10-48 (261)
195 1g63_A Epidermin modifying enz 53.6 14 0.00047 30.1 4.2 24 91-114 16-39 (181)
196 4em8_A Ribose 5-phosphate isom 53.6 20 0.0007 27.9 4.9 38 71-112 4-41 (148)
197 3osu_A 3-oxoacyl-[acyl-carrier 53.6 19 0.00064 30.5 5.4 34 75-113 4-37 (246)
198 1p3y_1 MRSD protein; flavoprot 53.5 12 0.00042 30.7 3.9 39 72-113 6-44 (194)
199 1fmt_A Methionyl-tRNA FMet for 53.4 47 0.0016 29.5 8.1 78 74-158 3-89 (314)
200 1tlt_A Putative oxidoreductase 53.0 40 0.0014 29.8 7.7 68 307-389 29-96 (319)
201 2ark_A Flavodoxin; FMN, struct 53.0 19 0.00063 29.1 5.1 37 75-112 5-42 (188)
202 3q9l_A Septum site-determining 52.9 20 0.00068 30.4 5.5 39 75-113 2-40 (260)
203 2vch_A Hydroquinone glucosyltr 52.8 11 0.00037 35.9 4.1 46 341-391 341-386 (480)
204 4h3v_A Oxidoreductase domain p 52.7 26 0.00088 31.8 6.6 99 270-389 6-106 (390)
205 3u9l_A 3-oxoacyl-[acyl-carrier 52.5 35 0.0012 30.3 7.3 32 76-112 6-37 (324)
206 3aek_B Light-independent proto 52.5 1.1E+02 0.0038 29.3 11.2 99 285-388 130-234 (525)
207 3i83_A 2-dehydropantoate 2-red 52.3 48 0.0016 29.3 8.1 33 74-113 2-34 (320)
208 2pn1_A Carbamoylphosphate synt 52.2 23 0.00077 31.5 6.0 33 72-112 2-36 (331)
209 4dzz_A Plasmid partitioning pr 52.1 21 0.00071 29.0 5.3 79 76-159 2-84 (206)
210 3ghy_A Ketopantoate reductase 52.0 25 0.00085 31.5 6.2 34 72-112 1-34 (335)
211 4ep1_A Otcase, ornithine carba 51.9 43 0.0015 30.2 7.5 78 73-158 178-255 (340)
212 1g3q_A MIND ATPase, cell divis 51.8 23 0.00077 29.6 5.6 38 76-113 3-40 (237)
213 3enk_A UDP-glucose 4-epimerase 51.8 34 0.0012 30.2 7.1 34 74-113 5-38 (341)
214 2ixa_A Alpha-N-acetylgalactosa 51.7 49 0.0017 30.9 8.4 75 307-389 43-122 (444)
215 1jkx_A GART;, phosphoribosylgl 51.5 89 0.003 25.9 9.1 74 75-159 1-88 (212)
216 4huj_A Uncharacterized protein 51.4 14 0.00048 30.9 4.1 37 71-114 20-56 (220)
217 3kcq_A Phosphoribosylglycinami 51.1 40 0.0014 28.1 6.8 74 74-158 8-90 (215)
218 4egb_A DTDP-glucose 4,6-dehydr 51.1 45 0.0016 29.5 7.9 34 72-111 22-55 (346)
219 3l4e_A Uncharacterized peptida 51.0 14 0.00049 30.6 4.1 79 308-391 27-122 (206)
220 3fvw_A Putative NAD(P)H-depend 51.0 22 0.00076 28.9 5.2 37 74-111 2-39 (192)
221 3rpe_A MDAB, modulator of drug 50.9 19 0.00065 30.2 4.8 39 74-112 25-68 (218)
222 3m2t_A Probable dehydrogenase; 50.8 36 0.0012 30.8 7.1 69 307-389 29-99 (359)
223 3t7c_A Carveol dehydrogenase; 50.6 62 0.0021 28.2 8.5 32 76-112 29-60 (299)
224 2bon_A Lipid kinase; DAG kinas 50.4 22 0.00076 31.9 5.5 43 69-113 23-66 (332)
225 1dxh_A Ornithine carbamoyltran 50.2 53 0.0018 29.5 7.9 80 73-159 154-233 (335)
226 2yfk_A Aspartate/ornithine car 50.0 62 0.0021 30.0 8.5 86 73-160 187-273 (418)
227 3fwy_A Light-independent proto 49.9 18 0.00061 32.3 4.7 35 76-113 49-85 (314)
228 3f2v_A General stress protein 49.7 9.5 0.00033 31.3 2.7 36 75-111 2-37 (192)
229 1t5b_A Acyl carrier protein ph 49.7 18 0.00061 29.4 4.5 38 75-112 2-43 (201)
230 1duv_G Octase-1, ornithine tra 49.5 52 0.0018 29.5 7.7 80 73-159 154-233 (333)
231 2ejb_A Probable aromatic acid 49.2 25 0.00085 28.7 5.1 35 75-113 2-37 (189)
232 1zco_A 2-dehydro-3-deoxyphosph 49.2 1.3E+02 0.0043 25.9 11.0 106 272-392 24-140 (262)
233 3u7i_A FMN-dependent NADH-azor 48.6 26 0.00088 29.4 5.3 38 74-111 4-48 (223)
234 1vl8_A Gluconate 5-dehydrogena 48.6 21 0.00071 30.7 4.9 40 67-112 14-53 (267)
235 3mc3_A DSRE/DSRF-like family p 48.4 30 0.001 26.3 5.3 40 74-113 15-55 (134)
236 2gk4_A Conserved hypothetical 48.4 74 0.0025 26.8 8.1 59 91-159 30-93 (232)
237 2q1w_A Putative nucleotide sug 48.4 18 0.00061 32.2 4.6 42 66-113 13-54 (333)
238 3l4b_C TRKA K+ channel protien 48.4 29 0.00098 28.7 5.6 62 90-159 9-74 (218)
239 1h6d_A Precursor form of gluco 48.3 30 0.001 32.3 6.3 98 268-389 81-181 (433)
240 2hmt_A YUAA protein; RCK, KTN, 48.3 34 0.0012 25.6 5.7 32 74-112 6-37 (144)
241 3sc4_A Short chain dehydrogena 48.2 60 0.0021 28.0 8.0 33 76-113 10-42 (285)
242 3oqb_A Oxidoreductase; structu 48.2 70 0.0024 29.0 8.7 56 326-389 57-114 (383)
243 4hv4_A UDP-N-acetylmuramate--L 48.2 76 0.0026 30.1 9.2 84 75-175 23-108 (494)
244 2ho3_A Oxidoreductase, GFO/IDH 48.2 57 0.002 28.8 8.0 69 307-389 24-93 (325)
245 4h31_A Otcase, ornithine carba 48.1 45 0.0015 30.3 7.2 78 74-158 181-258 (358)
246 3fwz_A Inner membrane protein 48.0 29 0.00098 26.4 5.2 69 75-159 8-80 (140)
247 3svl_A Protein YIEF; E. coli C 47.8 7.7 0.00026 31.9 1.8 39 73-111 3-42 (193)
248 1hdo_A Biliverdin IX beta redu 47.8 23 0.0008 28.5 4.9 35 73-113 2-36 (206)
249 3fgn_A Dethiobiotin synthetase 47.7 29 0.001 29.7 5.6 38 74-111 25-62 (251)
250 1hyq_A MIND, cell division inh 47.6 26 0.0009 29.8 5.4 38 76-113 3-40 (263)
251 3nkl_A UDP-D-quinovosamine 4-d 47.6 80 0.0027 23.6 7.8 71 73-159 3-74 (141)
252 4ew6_A D-galactose-1-dehydroge 47.6 96 0.0033 27.5 9.4 83 68-173 19-106 (330)
253 3dm5_A SRP54, signal recogniti 47.5 1.2E+02 0.0043 28.2 10.3 80 76-159 102-191 (443)
254 3hn7_A UDP-N-acetylmuramate-L- 47.5 1.1E+02 0.0039 29.1 10.4 89 72-175 17-107 (524)
255 1rtt_A Conserved hypothetical 47.4 10 0.00035 30.8 2.6 38 73-111 5-43 (193)
256 3ezl_A Acetoacetyl-COA reducta 47.3 47 0.0016 28.0 7.0 33 76-113 14-46 (256)
257 3ic5_A Putative saccharopine d 47.0 74 0.0025 22.5 9.4 71 74-160 5-79 (118)
258 4fu0_A D-alanine--D-alanine li 46.9 15 0.0005 33.4 3.8 41 72-112 1-43 (357)
259 3rc1_A Sugar 3-ketoreductase; 46.8 42 0.0014 30.2 6.9 93 269-389 26-120 (350)
260 2i87_A D-alanine-D-alanine lig 46.8 8.2 0.00028 35.2 2.1 42 72-113 1-44 (364)
261 3db2_A Putative NADPH-dependen 46.7 67 0.0023 28.8 8.3 69 307-390 28-98 (354)
262 2vvp_A Ribose-5-phosphate isom 46.5 19 0.00065 28.6 3.8 36 72-111 1-36 (162)
263 3of5_A Dethiobiotin synthetase 46.5 31 0.0011 29.0 5.6 37 75-111 4-40 (228)
264 3hly_A Flavodoxin-like domain; 46.2 27 0.00093 27.4 4.9 38 75-113 1-38 (161)
265 3db2_A Putative NADPH-dependen 45.9 32 0.0011 31.0 5.9 86 71-172 2-90 (354)
266 3brs_A Periplasmic binding pro 45.6 1.4E+02 0.0047 25.2 14.6 36 307-347 189-224 (289)
267 1ehi_A LMDDL2, D-alanine:D-lac 45.6 19 0.00064 33.0 4.3 41 72-113 1-45 (377)
268 1u0t_A Inorganic polyphosphate 45.5 22 0.00076 31.5 4.7 38 74-112 4-41 (307)
269 2x4g_A Nucleoside-diphosphate- 45.5 89 0.0031 27.4 8.9 33 75-113 14-46 (342)
270 3i4f_A 3-oxoacyl-[acyl-carrier 45.3 28 0.00096 29.6 5.2 34 75-113 7-40 (264)
271 1h6d_A Precursor form of gluco 45.2 67 0.0023 29.9 8.2 94 66-173 75-175 (433)
272 2acv_A Triterpene UDP-glucosyl 45.0 24 0.00083 33.3 5.1 39 74-114 9-49 (463)
273 3u3x_A Oxidoreductase; structu 44.9 40 0.0014 30.5 6.4 89 70-173 22-113 (361)
274 3ezy_A Dehydrogenase; structur 44.7 69 0.0024 28.5 8.0 70 307-390 25-96 (344)
275 3f5d_A Protein YDEA; unknow pr 44.7 27 0.00094 28.8 4.8 71 72-159 1-72 (206)
276 4eg0_A D-alanine--D-alanine li 44.7 24 0.00082 31.2 4.8 39 73-111 12-52 (317)
277 3dhn_A NAD-dependent epimerase 44.7 25 0.00085 29.0 4.7 34 74-113 4-37 (227)
278 2ph1_A Nucleotide-binding prot 44.5 30 0.001 29.6 5.3 39 75-113 18-56 (262)
279 2p2s_A Putative oxidoreductase 44.3 69 0.0024 28.4 7.9 87 72-172 2-90 (336)
280 1iow_A DD-ligase, DDLB, D-ALA\ 44.1 22 0.00075 31.0 4.5 39 74-113 2-43 (306)
281 3tpf_A Otcase, ornithine carba 44.0 74 0.0025 28.1 7.7 77 74-158 146-222 (307)
282 3rh0_A Arsenate reductase; oxi 43.9 29 0.001 27.0 4.6 82 71-158 17-100 (148)
283 4amu_A Ornithine carbamoyltran 43.8 60 0.0021 29.5 7.2 79 73-158 179-259 (365)
284 3uuw_A Putative oxidoreductase 43.6 51 0.0017 28.9 6.8 84 71-172 3-90 (308)
285 2g1u_A Hypothetical protein TM 43.6 1.1E+02 0.0037 23.4 9.7 71 74-160 19-94 (155)
286 3u5t_A 3-oxoacyl-[acyl-carrier 43.5 28 0.00095 29.9 4.9 34 75-113 27-60 (267)
287 4gdh_A DJ-1, uncharacterized p 43.4 39 0.0013 27.5 5.5 76 73-160 3-83 (194)
288 2vns_A Metalloreductase steap3 43.4 44 0.0015 27.6 6.0 31 74-111 28-58 (215)
289 2pzm_A Putative nucleotide sug 43.3 23 0.00079 31.4 4.5 39 68-112 14-52 (330)
290 3ea0_A ATPase, para family; al 43.3 29 0.001 29.0 5.0 39 75-113 4-43 (245)
291 3pxx_A Carveol dehydrogenase; 43.0 96 0.0033 26.5 8.5 32 76-112 11-42 (287)
292 3nvt_A 3-deoxy-D-arabino-heptu 42.8 1.8E+02 0.0063 26.5 10.4 107 273-394 144-261 (385)
293 1e4e_A Vancomycin/teicoplanin 42.8 14 0.00049 33.2 3.0 42 72-113 1-44 (343)
294 4dmm_A 3-oxoacyl-[acyl-carrier 42.8 31 0.001 29.7 5.1 32 76-112 29-60 (269)
295 3ohs_X Trans-1,2-dihydrobenzen 42.7 82 0.0028 27.9 8.1 68 308-389 28-97 (334)
296 3e18_A Oxidoreductase; dehydro 42.4 90 0.0031 28.0 8.4 84 72-172 3-89 (359)
297 3c85_A Putative glutathione-re 42.1 50 0.0017 26.2 6.0 71 73-159 38-114 (183)
298 3l3b_A ES1 family protein; ssg 42.1 39 0.0013 28.7 5.5 41 74-114 23-65 (242)
299 3lcm_A SMU.1420, putative oxid 41.9 34 0.0011 27.9 4.9 37 75-112 1-38 (196)
300 4g65_A TRK system potassium up 41.9 33 0.0011 32.4 5.4 64 324-390 266-333 (461)
301 3tqr_A Phosphoribosylglycinami 41.6 72 0.0024 26.6 6.9 74 74-158 5-91 (215)
302 3k5i_A Phosphoribosyl-aminoimi 41.6 27 0.00094 32.2 4.8 34 71-111 21-54 (403)
303 3on1_A BH2414 protein; structu 41.4 30 0.001 24.8 4.0 78 283-378 21-98 (101)
304 3bfv_A CAPA1, CAPB2, membrane 41.4 36 0.0012 29.4 5.3 39 75-113 82-120 (271)
305 1n7h_A GDP-D-mannose-4,6-dehyd 41.4 26 0.00089 31.7 4.6 33 75-113 29-61 (381)
306 3ijr_A Oxidoreductase, short c 41.2 1.2E+02 0.0041 26.1 8.8 33 76-113 48-80 (291)
307 2p2s_A Putative oxidoreductase 41.0 90 0.0031 27.6 8.2 68 307-388 27-96 (336)
308 1lss_A TRK system potassium up 41.0 39 0.0013 25.1 4.9 31 75-112 5-35 (140)
309 2hna_A Protein MIOC, flavodoxi 41.0 32 0.0011 26.4 4.4 35 75-110 2-36 (147)
310 1mvl_A PPC decarboxylase athal 40.9 38 0.0013 28.1 5.1 37 72-113 17-54 (209)
311 3icc_A Putative 3-oxoacyl-(acy 40.8 28 0.00097 29.3 4.5 35 75-114 7-41 (255)
312 3ec7_A Putative dehydrogenase; 40.8 69 0.0024 28.8 7.3 70 307-389 47-118 (357)
313 3btv_A Galactose/lactose metab 40.7 1.5E+02 0.0052 27.4 9.9 96 269-389 19-126 (438)
314 1t0i_A YLR011WP; FMN binding p 40.7 46 0.0016 26.6 5.7 37 75-111 1-44 (191)
315 1f4p_A Flavodoxin; electron tr 40.7 32 0.0011 26.2 4.5 36 75-111 1-36 (147)
316 4gmf_A Yersiniabactin biosynth 40.7 32 0.0011 31.4 5.1 92 268-388 5-100 (372)
317 2gkg_A Response regulator homo 40.7 28 0.00097 25.0 4.0 34 72-111 3-36 (127)
318 3e18_A Oxidoreductase; dehydro 40.5 1.2E+02 0.0042 27.1 9.1 67 307-389 28-96 (359)
319 2w37_A Ornithine carbamoyltran 40.5 62 0.0021 29.3 6.8 80 73-159 175-254 (359)
320 3orf_A Dihydropteridine reduct 40.5 36 0.0012 28.8 5.1 33 76-113 23-55 (251)
321 1zq6_A Otcase, ornithine carba 40.5 1E+02 0.0034 28.0 8.1 82 73-158 189-273 (359)
322 3i42_A Response regulator rece 40.3 35 0.0012 24.7 4.5 34 72-111 1-34 (127)
323 3hn2_A 2-dehydropantoate 2-red 40.2 50 0.0017 29.1 6.2 31 75-112 3-33 (312)
324 2r85_A PURP protein PF1517; AT 40.2 22 0.00074 31.5 3.8 32 74-113 2-33 (334)
325 1vr6_A Phospho-2-dehydro-3-deo 40.1 2.1E+02 0.0071 25.8 11.7 106 275-393 109-224 (350)
326 4etn_A LMPTP, low molecular we 40.0 41 0.0014 27.3 5.1 82 74-159 34-119 (184)
327 3ftp_A 3-oxoacyl-[acyl-carrier 39.9 30 0.001 29.8 4.5 33 75-112 28-60 (270)
328 3grf_A Ornithine carbamoyltran 39.4 84 0.0029 28.1 7.4 81 72-159 159-243 (328)
329 3nbm_A PTS system, lactose-spe 39.4 84 0.0029 22.8 6.2 37 73-111 5-41 (108)
330 3o1i_D Periplasmic protein TOR 39.0 1.8E+02 0.0061 24.7 11.6 42 73-114 4-45 (304)
331 2vo1_A CTP synthase 1; pyrimid 39.0 52 0.0018 28.5 5.6 43 71-113 19-62 (295)
332 2glx_A 1,5-anhydro-D-fructose 39.0 1.3E+02 0.0043 26.5 8.8 69 307-389 23-93 (332)
333 2pln_A HP1043, response regula 38.9 44 0.0015 24.6 4.9 36 70-111 14-49 (137)
334 3rp8_A Flavoprotein monooxygen 38.3 35 0.0012 31.2 5.0 36 70-112 19-54 (407)
335 2w37_A Ornithine carbamoyltran 38.3 2.3E+02 0.0077 25.6 11.3 89 257-364 164-253 (359)
336 3r6d_A NAD-dependent epimerase 38.1 39 0.0013 27.7 4.9 63 90-160 15-83 (221)
337 3keo_A Redox-sensing transcrip 37.8 1.2E+02 0.004 25.2 7.6 87 73-174 83-174 (212)
338 3s40_A Diacylglycerol kinase; 37.3 49 0.0017 29.1 5.6 42 74-115 8-50 (304)
339 4iiu_A 3-oxoacyl-[acyl-carrier 37.3 45 0.0015 28.4 5.3 33 76-113 27-59 (267)
340 3m2t_A Probable dehydrogenase; 37.2 97 0.0033 27.8 7.8 87 72-173 3-93 (359)
341 3fni_A Putative diflavin flavo 37.2 67 0.0023 25.0 5.9 38 75-113 5-42 (159)
342 2bka_A CC3, TAT-interacting pr 37.1 1.3E+02 0.0045 24.6 8.2 36 72-113 16-53 (242)
343 2hq1_A Glucose/ribitol dehydro 36.9 68 0.0023 26.7 6.3 26 87-112 12-37 (247)
344 3uve_A Carveol dehydrogenase ( 36.9 1.2E+02 0.0042 25.9 8.2 32 76-112 12-43 (286)
345 1ulz_A Pyruvate carboxylase N- 36.8 47 0.0016 31.0 5.7 32 74-112 2-33 (451)
346 1meo_A Phosophoribosylglycinam 36.6 1E+02 0.0035 25.4 7.1 72 76-158 2-87 (209)
347 3kzn_A Aotcase, N-acetylornith 36.4 1.5E+02 0.0052 26.8 8.8 84 73-158 189-273 (359)
348 1r5j_A Putative phosphotransac 36.4 9.5 0.00033 34.5 0.7 105 259-391 198-315 (337)
349 3sju_A Keto reductase; short-c 36.4 37 0.0013 29.3 4.6 36 72-112 21-56 (279)
350 1fxw_F Alpha2, platelet-activa 36.3 1.7E+02 0.006 23.8 9.1 74 270-346 96-175 (229)
351 3ej6_A Catalase-3; heme, hydro 36.3 1E+02 0.0035 30.6 8.0 45 68-114 531-575 (688)
352 3end_A Light-independent proto 36.2 50 0.0017 28.8 5.5 38 75-113 41-78 (307)
353 1qyc_A Phenylcoumaran benzylic 36.2 74 0.0025 27.5 6.7 96 74-175 4-108 (308)
354 3euw_A MYO-inositol dehydrogen 36.1 1.7E+02 0.0057 25.9 9.2 85 73-173 3-90 (344)
355 3o1l_A Formyltetrahydrofolate 36.0 1.1E+02 0.0037 27.0 7.5 72 74-158 105-189 (302)
356 3sds_A Ornithine carbamoyltran 35.9 1.9E+02 0.0066 26.0 9.3 37 73-115 187-223 (353)
357 3d3k_A Enhancer of mRNA-decapp 35.8 26 0.00089 30.2 3.4 36 75-113 86-121 (259)
358 3e5n_A D-alanine-D-alanine lig 35.8 21 0.00073 32.8 3.0 45 70-114 18-64 (386)
359 4hcj_A THIJ/PFPI domain protei 35.7 83 0.0028 25.1 6.3 73 73-159 6-78 (177)
360 3p9x_A Phosphoribosylglycinami 35.6 1.7E+02 0.0058 24.2 8.3 73 75-158 3-89 (211)
361 1ykg_A SIR-FP, sulfite reducta 35.5 26 0.0009 27.6 3.2 35 76-111 11-45 (167)
362 1dxh_A Ornithine carbamoyltran 35.3 2.1E+02 0.0073 25.5 9.4 91 257-365 142-233 (335)
363 2o8n_A APOA-I binding protein; 35.3 30 0.001 30.0 3.7 36 75-113 80-115 (265)
364 1rcu_A Conserved hypothetical 35.3 61 0.0021 26.5 5.4 40 71-112 20-64 (195)
365 1kyq_A Met8P, siroheme biosynt 35.3 39 0.0013 29.4 4.4 35 73-114 12-46 (274)
366 1wcv_1 SOJ, segregation protei 35.3 31 0.0011 29.3 3.9 36 76-113 7-44 (257)
367 3jte_A Response regulator rece 35.2 49 0.0017 24.5 4.7 34 72-111 1-34 (143)
368 1dhr_A Dihydropteridine reduct 35.1 50 0.0017 27.6 5.2 33 76-113 8-40 (241)
369 2h3h_A Sugar ABC transporter, 35.1 2.1E+02 0.0073 24.4 18.4 60 285-356 166-227 (313)
370 1f06_A MESO-diaminopimelate D- 35.1 52 0.0018 29.2 5.5 42 349-392 51-92 (320)
371 3kjh_A CO dehydrogenase/acetyl 35.1 28 0.00094 29.2 3.5 35 75-113 1-37 (254)
372 3k3p_A D-alanine--D-alanine li 35.1 28 0.00095 32.0 3.7 44 70-113 33-78 (383)
373 3tfo_A Putative 3-oxoacyl-(acy 34.8 42 0.0014 28.8 4.6 34 74-112 3-36 (264)
374 4ekn_B Aspartate carbamoyltran 34.8 1.1E+02 0.0037 27.0 7.3 111 235-372 121-233 (306)
375 1byi_A Dethiobiotin synthase; 34.8 58 0.002 26.7 5.4 35 76-110 2-36 (224)
376 3i12_A D-alanine-D-alanine lig 34.7 23 0.00078 32.2 3.0 42 72-113 1-44 (364)
377 3cio_A ETK, tyrosine-protein k 34.7 49 0.0017 29.0 5.1 39 75-113 104-142 (299)
378 3v7q_A Probable ribosomal prot 34.4 40 0.0014 24.2 3.7 78 283-378 22-99 (101)
379 3m2p_A UDP-N-acetylglucosamine 34.2 41 0.0014 29.3 4.6 34 74-113 2-35 (311)
380 8abp_A L-arabinose-binding pro 34.2 2.2E+02 0.0074 24.2 15.8 38 75-112 3-40 (306)
381 3k1y_A Oxidoreductase; structu 34.1 68 0.0023 26.0 5.6 38 74-111 11-55 (191)
382 1es9_A PAF-AH, platelet-activa 34.0 1.9E+02 0.0065 23.5 8.7 74 270-346 95-174 (232)
383 3hly_A Flavodoxin-like domain; 34.0 1.6E+02 0.0055 22.7 8.0 12 381-392 81-92 (161)
384 3i3l_A Alkylhalidase CMLS; fla 34.0 47 0.0016 32.5 5.3 37 69-112 18-54 (591)
385 3nrc_A Enoyl-[acyl-carrier-pro 33.9 1.7E+02 0.0058 24.9 8.6 35 76-113 27-61 (280)
386 3hwr_A 2-dehydropantoate 2-red 33.6 90 0.0031 27.5 6.8 31 73-110 18-48 (318)
387 3doj_A AT3G25530, dehydrogenas 33.5 55 0.0019 28.8 5.3 34 71-111 18-51 (310)
388 2e6c_A 5'-nucleotidase SURE; S 33.5 50 0.0017 28.1 4.7 36 75-115 1-37 (244)
389 2qr3_A Two-component system re 33.3 49 0.0017 24.3 4.4 34 72-111 1-34 (140)
390 3la6_A Tyrosine-protein kinase 33.3 54 0.0019 28.6 5.1 39 75-113 92-130 (286)
391 2bln_A Protein YFBG; transfera 33.2 1.1E+02 0.0036 27.0 7.1 77 75-158 1-83 (305)
392 3hzh_A Chemotaxis response reg 33.1 50 0.0017 25.1 4.5 32 71-108 33-64 (157)
393 1duv_G Octase-1, ornithine tra 33.0 2.6E+02 0.009 24.9 11.0 91 257-365 141-233 (333)
394 2cwd_A Low molecular weight ph 33.0 83 0.0028 24.7 5.8 83 73-159 3-92 (161)
395 2qyt_A 2-dehydropantoate 2-red 32.9 58 0.002 28.4 5.4 31 75-112 9-45 (317)
396 1y1p_A ARII, aldehyde reductas 32.7 61 0.0021 28.4 5.6 36 71-112 8-43 (342)
397 3n0v_A Formyltetrahydrofolate 32.6 1.4E+02 0.0049 26.0 7.7 72 74-158 90-174 (286)
398 2m1z_A LMO0427 protein; homolo 32.6 1.1E+02 0.0038 22.2 5.8 60 325-390 22-85 (106)
399 1tvm_A PTS system, galactitol- 32.6 73 0.0025 23.2 5.0 37 73-111 20-57 (113)
400 3gd5_A Otcase, ornithine carba 32.5 2.7E+02 0.0091 24.7 10.8 89 257-365 145-234 (323)
401 3q2i_A Dehydrogenase; rossmann 32.4 1.1E+02 0.0037 27.3 7.3 85 72-172 11-99 (354)
402 2wmy_A WZB, putative acid phos 32.4 94 0.0032 24.0 5.9 82 74-160 8-91 (150)
403 1i1q_B Anthranilate synthase c 32.3 1.3E+02 0.0045 24.0 7.1 64 324-389 12-83 (192)
404 3k9g_A PF-32 protein; ssgcid, 32.2 51 0.0017 28.0 4.8 38 75-113 27-64 (267)
405 3qha_A Putative oxidoreductase 32.2 81 0.0028 27.4 6.2 67 74-161 15-81 (296)
406 2nvw_A Galactose/lactose metab 32.2 1.5E+02 0.0052 27.9 8.5 98 269-389 38-145 (479)
407 3d3j_A Enhancer of mRNA-decapp 32.1 32 0.0011 30.5 3.4 36 75-113 133-168 (306)
408 3tqt_A D-alanine--D-alanine li 32.1 35 0.0012 31.1 3.9 44 71-114 1-46 (372)
409 2fb6_A Conserved hypothetical 32.0 39 0.0013 25.0 3.4 39 75-113 8-48 (117)
410 1vhq_A Enhancing lycopene bios 31.9 71 0.0024 26.7 5.5 42 73-114 5-48 (232)
411 2dzd_A Pyruvate carboxylase; b 31.6 39 0.0013 31.7 4.2 35 72-113 4-38 (461)
412 3e03_A Short chain dehydrogena 31.4 1.8E+02 0.0061 24.7 8.2 33 76-113 7-39 (274)
413 4etm_A LMPTP, low molecular we 31.4 1E+02 0.0036 24.5 6.1 87 71-160 15-108 (173)
414 2fek_A Low molecular weight pr 31.4 66 0.0023 25.5 4.9 82 74-160 22-105 (167)
415 4fb5_A Probable oxidoreductase 31.4 1.5E+02 0.0051 26.6 8.1 94 68-173 19-119 (393)
416 3bio_A Oxidoreductase, GFO/IDH 31.3 1.3E+02 0.0046 26.2 7.5 81 71-172 6-89 (304)
417 4fyk_A Deoxyribonucleoside 5'- 31.3 61 0.0021 25.3 4.5 37 351-387 63-99 (152)
418 1sbz_A Probable aromatic acid 31.3 76 0.0026 26.0 5.4 24 90-113 13-37 (197)
419 2z06_A Putative uncharacterize 31.2 2.1E+02 0.0071 24.4 8.3 81 272-365 2-87 (252)
420 1vlv_A Otcase, ornithine carba 31.2 2.8E+02 0.0096 24.6 10.7 90 257-365 155-245 (325)
421 4hb9_A Similarities with proba 31.2 53 0.0018 29.7 5.0 30 75-111 2-31 (412)
422 2ixa_A Alpha-N-acetylgalactosa 31.2 2.9E+02 0.01 25.4 10.2 91 71-172 17-115 (444)
423 3q9s_A DNA-binding response re 31.2 57 0.002 27.4 4.9 38 68-111 31-68 (249)
424 3tpc_A Short chain alcohol deh 31.1 1.2E+02 0.0041 25.4 7.0 33 76-113 8-40 (257)
425 3u80_A 3-dehydroquinate dehydr 31.1 1.5E+02 0.0051 23.0 6.6 31 355-387 69-104 (151)
426 1oth_A Protein (ornithine tran 31.0 86 0.003 27.9 6.0 78 73-158 154-231 (321)
427 1evy_A Glycerol-3-phosphate de 31.0 38 0.0013 30.6 3.9 34 72-112 13-46 (366)
428 2xxa_A Signal recognition part 31.0 2.1E+02 0.007 26.6 9.0 80 76-159 102-192 (433)
429 2l17_A Synarsc, arsenate reduc 30.9 68 0.0023 24.3 4.7 76 75-157 5-82 (134)
430 3ip3_A Oxidoreductase, putativ 30.9 1.2E+02 0.0042 26.8 7.3 74 307-389 23-98 (337)
431 3is3_A 17BETA-hydroxysteroid d 30.9 72 0.0025 27.2 5.5 33 76-113 19-51 (270)
432 3va7_A KLLA0E08119P; carboxyla 30.9 85 0.0029 33.7 6.9 33 74-113 31-63 (1236)
433 1u9c_A APC35852; structural ge 30.8 1E+02 0.0035 25.4 6.3 40 75-114 6-52 (224)
434 2yv1_A Succinyl-COA ligase [AD 30.7 1.1E+02 0.0037 26.8 6.7 38 348-387 60-100 (294)
435 4e12_A Diketoreductase; oxidor 30.6 67 0.0023 27.8 5.3 33 72-111 2-34 (283)
436 2ixd_A LMBE-related protein; h 30.5 58 0.002 27.6 4.7 38 72-111 1-38 (242)
437 2yv2_A Succinyl-COA synthetase 30.4 2.5E+02 0.0084 24.5 9.0 38 348-387 60-101 (297)
438 3lou_A Formyltetrahydrofolate 30.4 1.7E+02 0.0057 25.6 7.7 72 74-158 95-179 (292)
439 3f1l_A Uncharacterized oxidore 30.2 72 0.0025 26.8 5.4 31 76-111 13-43 (252)
440 3n8k_A 3-dehydroquinate dehydr 30.2 1.5E+02 0.0051 23.5 6.5 31 355-387 93-125 (172)
441 1e6u_A GDP-fucose synthetase; 30.2 34 0.0012 30.0 3.3 34 72-111 1-34 (321)
442 1xea_A Oxidoreductase, GFO/IDH 30.1 1.1E+02 0.0039 26.7 6.9 68 307-389 26-94 (323)
443 2v4n_A Multifunctional protein 30.0 65 0.0022 27.6 4.9 36 75-115 2-38 (254)
444 2r6j_A Eugenol synthase 1; phe 29.9 36 0.0012 29.8 3.5 74 75-159 12-88 (318)
445 3v7e_A Ribosome-associated pro 29.8 1.3E+02 0.0043 20.5 5.6 53 283-351 14-66 (82)
446 3rqi_A Response regulator prot 29.8 66 0.0023 25.3 4.8 35 71-111 4-38 (184)
447 3g85_A Transcriptional regulat 29.7 2.5E+02 0.0085 23.5 17.3 212 72-347 9-224 (289)
448 1gsa_A Glutathione synthetase; 29.7 46 0.0016 29.0 4.1 39 75-113 2-41 (316)
449 3o9z_A Lipopolysaccaride biosy 29.7 2.6E+02 0.0087 24.4 9.1 84 74-172 3-96 (312)
450 1ml4_A Aspartate transcarbamoy 29.6 2.3E+02 0.0079 24.9 8.6 94 257-372 143-236 (308)
451 4hkt_A Inositol 2-dehydrogenas 29.5 1.5E+02 0.0053 26.0 7.7 82 74-172 3-87 (331)
452 2i6u_A Otcase, ornithine carba 29.5 2.9E+02 0.01 24.3 11.4 89 257-364 136-225 (307)
453 3l9w_A Glutathione-regulated p 29.4 1.5E+02 0.005 27.4 7.6 69 75-159 5-77 (413)
454 3k4h_A Putative transcriptiona 29.3 2.5E+02 0.0087 23.5 20.8 215 73-348 7-229 (292)
455 2gdz_A NAD+-dependent 15-hydro 29.3 68 0.0023 27.2 5.1 32 76-112 8-39 (267)
456 4da9_A Short-chain dehydrogena 29.2 85 0.0029 27.0 5.7 32 76-112 30-61 (280)
457 4fc7_A Peroxisomal 2,4-dienoyl 29.2 1.2E+02 0.0041 25.9 6.7 32 76-112 28-59 (277)
458 3ip3_A Oxidoreductase, putativ 29.1 1.2E+02 0.0041 26.8 6.9 89 74-173 2-92 (337)
459 2z1m_A GDP-D-mannose dehydrata 29.1 50 0.0017 29.1 4.3 36 72-113 1-36 (345)
460 3heb_A Response regulator rece 29.1 1.7E+02 0.0058 21.7 7.0 14 324-337 16-29 (152)
461 2yrx_A Phosphoribosylglycinami 29.0 86 0.0029 29.2 6.1 37 70-113 17-54 (451)
462 3v2g_A 3-oxoacyl-[acyl-carrier 29.0 64 0.0022 27.6 4.9 33 76-113 32-64 (271)
463 3edm_A Short chain dehydrogena 29.0 95 0.0033 26.2 6.0 33 76-113 9-41 (259)
464 4id9_A Short-chain dehydrogena 28.8 51 0.0018 29.2 4.4 37 71-113 16-52 (347)
465 1xjc_A MOBB protein homolog; s 28.8 97 0.0033 24.6 5.5 37 76-113 5-41 (169)
466 4iin_A 3-ketoacyl-acyl carrier 28.8 79 0.0027 26.9 5.4 33 76-113 30-62 (271)
467 3phh_A Shikimate dehydrogenase 28.8 1.4E+02 0.0047 25.8 6.9 65 74-160 118-182 (269)
468 1s2d_A Purine trans deoxyribos 28.7 45 0.0015 26.5 3.4 38 352-389 77-116 (167)
469 2x5n_A SPRPN10, 26S proteasome 28.6 1.8E+02 0.0062 23.4 7.3 51 272-336 110-160 (192)
470 3ax6_A Phosphoribosylaminoimid 28.4 79 0.0027 28.5 5.6 32 75-113 2-33 (380)
471 3geb_A EYES absent homolog 2; 28.3 86 0.003 26.8 5.1 54 289-358 217-270 (274)
472 2q0q_A ARYL esterase; SGNH hyd 28.3 2.2E+02 0.0076 22.5 8.6 46 270-318 85-141 (216)
473 2bgk_A Rhizome secoisolaricire 28.3 70 0.0024 27.2 5.0 24 88-111 24-47 (278)
474 4h08_A Putative hydrolase; GDS 28.2 1.9E+02 0.0064 22.9 7.4 47 269-318 75-121 (200)
475 3ew7_A LMO0794 protein; Q8Y8U8 28.2 63 0.0022 26.2 4.5 68 75-158 1-69 (221)
476 3n74_A 3-ketoacyl-(acyl-carrie 28.1 71 0.0024 26.9 5.0 32 76-112 10-41 (261)
477 3afn_B Carbonyl reductase; alp 28.1 1.4E+02 0.0048 24.8 6.9 27 87-113 14-40 (258)
478 3qiv_A Short-chain dehydrogena 28.0 73 0.0025 26.7 5.0 32 76-112 10-41 (253)
479 2qvg_A Two component response 27.9 1.6E+02 0.0056 21.3 6.7 31 324-354 19-49 (143)
480 3huu_A Transcription regulator 27.9 2.8E+02 0.0096 23.6 14.7 209 73-347 21-238 (305)
481 3grc_A Sensor protein, kinase; 27.9 84 0.0029 23.0 4.9 35 71-111 3-37 (140)
482 2iuf_A Catalase; oxidoreductas 27.8 1E+02 0.0035 30.6 6.4 45 67-113 522-567 (688)
483 3mz0_A Inositol 2-dehydrogenas 27.7 2.1E+02 0.007 25.3 8.2 85 74-172 2-90 (344)
484 3cs3_A Sugar-binding transcrip 27.6 2.7E+02 0.0091 23.2 19.0 41 73-113 7-47 (277)
485 1cp2_A CP2, nitrogenase iron p 27.6 75 0.0026 26.9 5.1 36 76-112 2-37 (269)
486 2iya_A OLEI, oleandomycin glyc 27.6 2.3E+02 0.0078 25.7 8.8 90 76-176 256-345 (424)
487 3csu_A Protein (aspartate carb 27.5 2E+02 0.007 25.3 7.8 75 73-158 153-229 (310)
488 1fjh_A 3alpha-hydroxysteroid d 27.5 75 0.0025 26.6 5.0 33 76-113 2-34 (257)
489 1h5q_A NADP-dependent mannitol 27.4 83 0.0028 26.4 5.3 32 76-112 15-46 (265)
490 3orq_A N5-carboxyaminoimidazol 27.4 1.2E+02 0.004 27.5 6.6 34 73-113 11-44 (377)
491 2vrn_A Protease I, DR1199; cys 27.3 1.2E+02 0.0041 24.1 6.0 40 72-114 7-46 (190)
492 2gn4_A FLAA1 protein, UDP-GLCN 27.2 58 0.002 29.1 4.4 36 71-112 18-55 (344)
493 3kvo_A Hydroxysteroid dehydrog 27.1 2.7E+02 0.0094 24.7 8.9 33 76-113 46-78 (346)
494 3rht_A (gatase1)-like protein; 27.1 29 0.001 29.9 2.2 36 74-113 4-39 (259)
495 2dkn_A 3-alpha-hydroxysteroid 26.9 77 0.0026 26.3 5.0 27 87-113 8-34 (255)
496 1vkz_A Phosphoribosylamine--gl 26.9 1E+02 0.0035 28.3 6.2 33 70-110 11-44 (412)
497 1e5d_A Rubredoxin\:oxygen oxid 26.9 2.9E+02 0.0098 24.8 9.3 97 284-389 235-343 (402)
498 3klj_A NAD(FAD)-dependent dehy 26.9 64 0.0022 29.4 4.7 77 75-158 147-227 (385)
499 2qs7_A Uncharacterized protein 26.8 1.3E+02 0.0044 23.0 5.7 37 74-113 7-45 (144)
500 1ja9_A 4HNR, 1,3,6,8-tetrahydr 26.8 68 0.0023 27.1 4.6 26 87-112 28-53 (274)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=2.1e-35 Score=285.70 Aligned_cols=300 Identities=14% Similarity=0.044 Sum_probs=218.3
Q ss_pred cccEEEEEeccC---CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhh----------hhhhhhcceEEEEc
Q 016053 73 KSKLVLLVSHEL---SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL----------EHKMWDRGVQVISA 139 (396)
Q Consensus 73 ~~~kIl~v~~~~---~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 139 (396)
++||||++++.. ..||.++++.+++++|+++||+|+|+++..+.........+ .......|++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 357999999773 34999999999999999999999999965443211100000 00003346666554
Q ss_pred Cc----------------hhh----------hh-----hccCCcEEEEcCchhhHHHHHHH-hcCCCccccceeeeeeec
Q 016053 140 KG----------------QET----------IN-----TALKADLIVLNTAVAGKWLDAVL-KEDVPRVLPNVLWWIHEM 187 (396)
Q Consensus 140 ~~----------------~~~----------~~-----~~~~~DiV~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~~h~~ 187 (396)
.. ... +. +..+||+||+|+.........+. ..+ .+++++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~v~~~h~~ 155 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFK-----IPAVFTIHRL 155 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHC-----CCEEEEESCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccC-----CCEEEEeccc
Confidence 32 100 00 14599999999876544333332 234 4588899987
Q ss_pred ccccCc------------------hhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhh
Q 016053 188 RGHYFK------------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAED 249 (396)
Q Consensus 188 ~~~~~~------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~ 249 (396)
....+. ......+..++.+++.|....+.. ...++.+..++.+||||+|.+.|.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~----~~~~~~~~~~i~vi~ngvd~~~~~~~~~ 231 (439)
T 3fro_A 156 NKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDE----WGFFRNFEGKITYVFNGIDCSFWNESYL 231 (439)
T ss_dssp CCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHT----HHHHGGGTTSEEECCCCCCTTTSCGGGS
T ss_pred ccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHH----hhhhhhcCCceeecCCCCCchhcCcccc
Confidence 422111 112233456788888888766652 2244567889999999999999876532
Q ss_pred hHHHHHhHHHHHHHcCCCCCCEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHH
Q 016053 250 NVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL 328 (396)
Q Consensus 250 ~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l 328 (396)
+......+..+++++|++++ ++|+++|++. +.||++.+++|++.+.+... .++++|+|+|+|+ ..+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~-----~~~~~l~i~G~g~---~~~~~~l 302 (439)
T 3fro_A 232 TGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE-----FQEMRFIIIGKGD---PELEGWA 302 (439)
T ss_dssp CSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG-----GGGEEEEEECCCC---HHHHHHH
T ss_pred cchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc-----CCCeEEEEEcCCC---hhHHHHH
Confidence 22234557889999999777 9999999999 99999999999999865210 1699999999986 2345899
Q ss_pred HHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 329 RNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 329 ~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++++++ +.+.|.|+. +++.++|++||++|+||. .|+||++++||||||+|||+|+.||.+
T Consensus 303 ~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~ 366 (439)
T 3fro_A 303 RSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 366 (439)
T ss_dssp HHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHH
T ss_pred HHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcc
Confidence 99999988 788899954 789999999999999999 999999999999999999999998753
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=5.9e-35 Score=283.06 Aligned_cols=298 Identities=15% Similarity=0.141 Sum_probs=208.7
Q ss_pred cccccccEEEEEeccCC---------CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEc
Q 016053 69 LSFMKSKLVLLVSHELS---------LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~---------~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (396)
....+|||||+++.... .||+++++.+++++|.++||+|++++......... . .....++.++..
T Consensus 15 ~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----~--~~~~~~v~v~~~ 88 (438)
T 3c48_A 15 VPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE----I--VRVAENLRVINI 88 (438)
T ss_dssp ----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS----E--EEEETTEEEEEE
T ss_pred ccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc----c--ccccCCeEEEEe
Confidence 33455679999997542 38889999999999999999999999553310000 0 011235555433
Q ss_pred Cch-----------h-------h-----hhhccCCcEEEEcCchhhHHHH-HHHhcCCCccccceeeeeeeccccc---C
Q 016053 140 KGQ-----------E-------T-----INTALKADLIVLNTAVAGKWLD-AVLKEDVPRVLPNVLWWIHEMRGHY---F 192 (396)
Q Consensus 140 ~~~-----------~-------~-----~~~~~~~DiV~~~~~~~~~~~~-~~~~~~~~~~~~~vv~~~h~~~~~~---~ 192 (396)
... . . +....+||+||+|......... .....+ .+++++.|+..... +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~-----~p~v~~~h~~~~~~~~~~ 163 (438)
T 3c48_A 89 AAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWR-----IPLIHTAHTLAAVKNSYR 163 (438)
T ss_dssp CCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHT-----CCEEEECSSCHHHHSCC-
T ss_pred cCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcC-----CCEEEEecCCcccccccc
Confidence 210 0 0 1111259999999854433322 222334 34788888763111 0
Q ss_pred c------hh-----hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHH
Q 016053 193 K------LD-----YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVR 261 (396)
Q Consensus 193 ~------~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r 261 (396)
. .. ....++.++.+++.|....+.+.+ .+|++..++.+||||+|.+.|.+... ..+..+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~~g~~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r 234 (438)
T 3c48_A 164 DDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH----HYDADPDRISVVSPGADVELYSPGND-----RATERSR 234 (438)
T ss_dssp ---CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH----HHCCCGGGEEECCCCCCTTTSCCC---------CHHHH
T ss_pred cccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH----HhCCChhheEEecCCccccccCCccc-----chhhhhH
Confidence 0 00 122345678888888777766543 56888888999999999988865421 1234588
Q ss_pred HHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 262 ESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 262 ~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
+++++++++++|+++|++.+.||++.+++|++.+.+..++ .+++|+|+|+.. .++.+.+.++++++++++.++|
T Consensus 235 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~-----~~~~l~i~G~~~-~~g~~~~~l~~~~~~~~l~~~v 308 (438)
T 3c48_A 235 RELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD-----RNLRVIICGGPS-GPNATPDTYRHMAEELGVEKRI 308 (438)
T ss_dssp HHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT-----CSEEEEEECCBC-------CHHHHHHHHTTCTTTE
T ss_pred HhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC-----cceEEEEEeCCC-CCCcHHHHHHHHHHHcCCCCcE
Confidence 9999988999999999999999999999999998763311 289999999821 0112678899999999999999
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+|+|++ +++.++|++||++|+||. .|+||++++|||+||+|||+++.||..
T Consensus 309 ~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~ 361 (438)
T 3c48_A 309 RFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLP 361 (438)
T ss_dssp EEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHH
T ss_pred EEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChh
Confidence 999998 789999999999999999 999999999999999999999998853
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=5.2e-35 Score=279.11 Aligned_cols=287 Identities=18% Similarity=0.177 Sum_probs=216.5
Q ss_pred cccccEEEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------
Q 016053 71 FMKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------ 142 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (396)
||++|||+++++... .||+++++.+++++| +||+|+|++....... ........++.++.....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 72 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEE------AHAYDKTLDYEVIRWPRSVMLPTP 72 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH------HHHHHTTCSSEEEEESSSSCCSCH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccc------hhhhccccceEEEEccccccccch
Confidence 567789999998654 589999999999999 6999999996654210 011123446666654431
Q ss_pred ------hhhhhccCCcEEEEcCchhhHHH-HHHHhcCCCccccceeeeeeecccccCc-----hhhhccccccccceeec
Q 016053 143 ------ETINTALKADLIVLNTAVAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPLVAGAMIDS 210 (396)
Q Consensus 143 ------~~~~~~~~~DiV~~~~~~~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~s 210 (396)
..+.+..+||+||+|......++ ..+...+. ++++++.|+....+.. ......++.++.+++.|
T Consensus 73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 148 (394)
T 3okp_A 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGA----SKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYIS 148 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTC----SEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESC
T ss_pred hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCC----CcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcC
Confidence 23445689999999986443322 23344443 3478888865321111 11234456788888888
Q ss_pred cccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 211 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
....+.+.+ .++ ...++.+||||+|.+.|.+.. ...+..++++++++++.++|+++|++.+.||++.+++
T Consensus 149 ~~~~~~~~~----~~~-~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~ 218 (394)
T 3okp_A 149 QYTLRRFKS----AFG-SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIK 218 (394)
T ss_dssp HHHHHHHHH----HHC-SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHH
T ss_pred HHHHHHHHH----hcC-CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHH
Confidence 887776654 344 447899999999999886522 2335778999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWG 368 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~ 368 (396)
|++++.+. +++++|+|+|+|+ +.+.+++++ .++.++|+|+|++ +++.++|+.||++|+||. .
T Consensus 219 a~~~l~~~-------~~~~~l~i~G~g~-----~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~--~ 282 (394)
T 3okp_A 219 AMPQVIAA-------RPDAQLLIVGSGR-----YESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR--T 282 (394)
T ss_dssp HHHHHHHH-------STTCEEEEECCCT-----THHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC--C
T ss_pred HHHHHHhh-------CCCeEEEEEcCch-----HHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc--c
Confidence 99998763 3899999999986 778888888 5666899999998 899999999999999999 8
Q ss_pred -------CCccHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 369 -------ECFGRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 369 -------E~fg~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|+||++++|||++|+|||+++.||...
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e 316 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPE 316 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGG
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHH
Confidence 999999999999999999999998754
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=4.2e-35 Score=282.32 Aligned_cols=294 Identities=15% Similarity=0.141 Sum_probs=207.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc---------
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------- 141 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 141 (396)
.|++|||+++++....||+++++.+++++|.+.||+|++++.............+...+ .+...+....
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 114 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNAL--QGNESLKLTEEMKELYLNV 114 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHH--TTCCSCCCCHHHHHHHHHH
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceee--cccccccccHHHHHHHHHH
Confidence 46778999999887779999999999999999999999998543311000000011111 1111111111
Q ss_pred ---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh---hhccccccccce-eeccccH
Q 016053 142 ---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD---YVKHLPLVAGAM-IDSHVTA 214 (396)
Q Consensus 142 ---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~---~~~~~~~~~~~~-~~s~~~~ 214 (396)
...+.+..+||+||+|++....+...+ ... .+++++.|+......... ..+.+...+.++ +.+....
T Consensus 115 ~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~-----~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~ 188 (416)
T 2x6q_A 115 NRENSKFIDLSSFDYVLVHDPQPAALIEFY-EKK-----SPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQ 188 (416)
T ss_dssp HHHHHHSSCGGGSSEEEEESSTTGGGGGGS-CCC-----SCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSC
T ss_pred HHHHHHHHhhcCCCEEEEeccchhhHHHHH-Hhc-----CCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechHHHH
Confidence 011123468999999986554332211 111 568888887533221111 122334455544 4443322
Q ss_pred HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHH
Q 016053 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 215 ~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
+ +++..++.+||||+|...+.+.+. ....+.++|+++++++++++|+++|++.+.||++.+++|++.
T Consensus 189 ~----------~~~~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 189 P----------ELDRNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp T----------TSCTTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred h----------hCCccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 2 234477999999999876643211 122356789999998899999999999999999999999999
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC-----CHHHHHHHcCEEEecCCCCCC
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-----TVAPYLAAIDVLVQNSQAWGE 369 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~-----~~~~~~~~aDv~v~pS~~~~E 369 (396)
+.+. .|+++|+|+|+|+..++++.+.++++++++++.++|+|+|+.. ++.++|++||++|+||. .|
T Consensus 256 l~~~-------~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E 326 (416)
T 2x6q_A 256 VKEK-------IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSI--RE 326 (416)
T ss_dssp HHHH-------CTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SC
T ss_pred HHHh-------CCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCC--cC
Confidence 8763 3799999999997554556788999999999999999999653 79999999999999999 99
Q ss_pred CccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 370 CFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 370 ~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+||++++||||||+|||+|+.||..
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~~ 351 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGIK 351 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHHH
T ss_pred CCccHHHHHHHcCCCEEEccCCCCh
Confidence 9999999999999999999998743
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=4.9e-35 Score=288.55 Aligned_cols=300 Identities=13% Similarity=0.101 Sum_probs=212.9
Q ss_pred ccEEEEEeccC-------------CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc-hhhhhhhhhhhhhcceEEEEc
Q 016053 74 SKLVLLVSHEL-------------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-DEVIYSLEHKMWDRGVQVISA 139 (396)
Q Consensus 74 ~~kIl~v~~~~-------------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 139 (396)
+|||+++++.. ..||+++++.+++++|.++||+|+|++....... ......+.......|++++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 37999999753 2488899999999999999999999995433211 000000110001346666543
Q ss_pred Cch---------------------hhhhhc--cCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccC---
Q 016053 140 KGQ---------------------ETINTA--LKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYF--- 192 (396)
Q Consensus 140 ~~~---------------------~~~~~~--~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~--- 192 (396)
... ..+.+. .+||+||+|....+..... +...+ .|++++.|+......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~-----~p~v~~~H~~~~~~~~~~ 161 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKG-----LPFTFTGHSLGAQKMEKL 161 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHC-----CCEEEECSSCHHHHHHTT
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcC-----CcEEEEccCcccccchhh
Confidence 311 011122 4899999998654433222 22334 347888887531100
Q ss_pred ----------c------h---hhhccccccccceeeccccHHHHHHHHHhh--hc-c----cCCCEEEEecCCccchhhh
Q 016053 193 ----------K------L---DYVKHLPLVAGAMIDSHVTAEYWKNRTRER--LR-I----KMPDTYVVHLGNSKELMEV 246 (396)
Q Consensus 193 ----------~------~---~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~g-~----~~~k~~vI~ngid~~~~~~ 246 (396)
. . .....++.++.+++.|....+.+.+ . +| + +..++.|||||+|.+.|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~----~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~ 237 (499)
T 2r60_A 162 NVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYS----HDLYRGAVNVEDDDKFSVIPPGVNTRVFDG 237 (499)
T ss_dssp CCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTT----SGGGTTTCCTTCGGGEEECCCCBCTTTSSS
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh----hhcccccccccCCCCeEEECCCcChhhcCc
Confidence 0 0 0122345677888888776665443 4 56 5 6678999999999988865
Q ss_pred hhhhHHHHHhHHHHHHHcC-----CCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-
Q 016053 247 AEDNVAKRVLREHVRESLG-----VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA- 320 (396)
Q Consensus 247 ~~~~~~~~~~~~~~r~~~g-----~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~- 320 (396)
... ...+..+|+++| ++++.++|+++|++.+.||++.+++|++.+.+..+ ...+|+|+|+....
T Consensus 238 ~~~----~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~------~~~~l~i~G~~~~~~ 307 (499)
T 2r60_A 238 EYG----DKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD------KANLVLTLRGIENPF 307 (499)
T ss_dssp CCC----HHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH------HCEEEEEESSCSBTT
T ss_pred cch----hhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC------CceEEEEECCCCCcc
Confidence 432 123466888888 77888999999999999999999999998875432 24689999983211
Q ss_pred ---------cchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHc----CEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 321 ---------QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 321 ---------~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~a----Dv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
+.+|.+++++++++++++++|+|+|++ +++.++|++| |++|+||. .|+||++++||||||+||
T Consensus 308 ~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~Pv 385 (499)
T 2r60_A 308 EDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPA 385 (499)
T ss_dssp TBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCE
T ss_pred cccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCE
Confidence 122388999999999999999999997 7899999999 99999999 999999999999999999
Q ss_pred EEcCCCCCC
Q 016053 386 LVLSELHPS 394 (396)
Q Consensus 386 I~t~~gG~~ 394 (396)
|+|+.||..
T Consensus 386 I~s~~~g~~ 394 (499)
T 2r60_A 386 VVTRNGGPA 394 (499)
T ss_dssp EEESSBHHH
T ss_pred EEecCCCHH
Confidence 999998753
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=2.9e-33 Score=267.48 Aligned_cols=281 Identities=16% Similarity=0.125 Sum_probs=202.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC---------------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------------- 140 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 140 (396)
++..... ...||+++++.+++++|.++||+|++++...+.... ....++.+....
T Consensus 17 ~~~~~~~-p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (394)
T 2jjm_A 17 KIGITCY-PSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN---------KVYPNIYFHEVTVNQYSVFQYPPYDLA 86 (394)
T ss_dssp EEEEECC-C--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------------CCCTTEEEECCCCC----CCSCCHHHH
T ss_pred eeehhcC-CCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc---------ccCCceEEEecccccccccccccccHH
Confidence 4443332 345899999999999999999999999965432100 011122221111
Q ss_pred ---chhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc------Cchhhhccccccccceeecc
Q 016053 141 ---GQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY------FKLDYVKHLPLVAGAMIDSH 211 (396)
Q Consensus 141 ---~~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~------~~~~~~~~~~~~~~~~~~s~ 211 (396)
....+.+..+||+||+|......+...+.+.... ...|++++.|+..... +.......++.++.+++.|.
T Consensus 87 ~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 87 LASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIG-ERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTT-TCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCH
T ss_pred HHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhc-CCCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCH
Confidence 0122334579999999976543322222211111 1256888899853111 11112334567888888888
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHH
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a 291 (396)
...+.+.+ .++. ..++.+||||+|.+.|.+.. +..++++++++++.++|+++|++.+.||++.+++|
T Consensus 166 ~~~~~~~~----~~~~-~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 166 SLINETHE----LVKP-NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp HHHHHHHH----HTCC-SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred HHHHHHHH----hhCC-cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 77766554 3343 56899999999998876532 34578889998888999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCc
Q 016053 292 FYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 371 (396)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~f 371 (396)
++.+.+ + ++++|+|+|+|+ +.+++++++++++++++|+|+|+.+++.++|++||++|+||. .|+|
T Consensus 233 ~~~l~~-------~-~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~--~e~~ 297 (394)
T 2jjm_A 233 FAKIVT-------E-VDAKLLLVGDGP-----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSE--KESF 297 (394)
T ss_dssp HHHHHH-------S-SCCEEEEECCCT-----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCS--CCSC
T ss_pred HHHHHh-------h-CCCEEEEECCch-----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccc--cCCC
Confidence 999865 2 478999999986 678899999999999999999999999999999999999999 9999
Q ss_pred cHHHHHHHhcCCCEEEcCCCCCCC
Q 016053 372 GRITIEAMAFQLPVLVLSELHPSI 395 (396)
Q Consensus 372 g~~~lEAma~G~PVI~t~~gG~~~ 395 (396)
|++++|||+||+|||+|+.||..+
T Consensus 298 ~~~~~EAma~G~PvI~~~~~~~~e 321 (394)
T 2jjm_A 298 GLVLLEAMACGVPCIGTRVGGIPE 321 (394)
T ss_dssp CHHHHHHHHTTCCEEEECCTTSTT
T ss_pred chHHHHHHhcCCCEEEecCCChHH
Confidence 999999999999999999999765
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=9.8e-34 Score=278.21 Aligned_cols=299 Identities=16% Similarity=0.113 Sum_probs=208.0
Q ss_pred cEEEEEeccC----CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--hh----------hhh--hhhcceEE
Q 016053 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--SL----------EHK--MWDRGVQV 136 (396)
Q Consensus 75 ~kIl~v~~~~----~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--~~----------~~~--~~~~~~~~ 136 (396)
|||+++++.. ..||+++++.+++++|.++||+|+|++...+........ .+ ... ....|+++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence 5899999864 248889999999999999999999999643210000000 00 000 01246666
Q ss_pred EEcCch--------------------------------hhhh----hccCCcEEEEcCchhhHHHHHHHhcCCCccccce
Q 016053 137 ISAKGQ--------------------------------ETIN----TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV 180 (396)
Q Consensus 137 ~~~~~~--------------------------------~~~~----~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~v 180 (396)
+..... ..+. +..+||+||+|+...+.....+.... ....|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~--~~~~p~ 158 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAE--TPEIPS 158 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSS--SCCCCE
T ss_pred EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcc--cCCCCE
Confidence 543110 0111 24689999999855443333333210 112568
Q ss_pred eeeeeecccc-cC----------ch---------------hhhccccccccceeeccccHHHHHHHHHhhhc--------
Q 016053 181 LWWIHEMRGH-YF----------KL---------------DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR-------- 226 (396)
Q Consensus 181 v~~~h~~~~~-~~----------~~---------------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g-------- 226 (396)
++++|+.... .. .. .....+..++.+++.|....+.+.+. .+|
T Consensus 159 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~g~~~~~~~~ 235 (485)
T 1rzu_A 159 LLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGLEGVIG 235 (485)
T ss_dssp EEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTCHHHHH
T ss_pred EEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhcc---ccCcchHHHHH
Confidence 8899985311 00 00 01122356778888887776665432 123
Q ss_pred ccCCCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCCC-CEEEEEEecccCCCCHHHHHHHHHH
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRNE-DLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~~-~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
.+..++.+||||+|.+.|.+..+. ..+...+..+|+++|++++ +++|+++||+.+.||++.+++|++.
T Consensus 236 ~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (485)
T 1rzu_A 236 SRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDE 315 (485)
T ss_dssp TTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHH
T ss_pred hhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHH
Confidence 356789999999999888654321 1122346778999999875 6799999999999999999999999
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE-EecCcC-CHHHHHHHcCEEEecCCCCCCCcc
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTL-TVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~~~-~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
+.+ ++++|+|+|+|+ ..+.+.+++++++++ ++|+ |.|..+ ++.++|++||++|+||. .|+||
T Consensus 316 l~~---------~~~~l~ivG~g~---~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~ 379 (485)
T 1rzu_A 316 IVS---------LGGRLVVLGAGD---VALEGALLAAASRHH--GRVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCG 379 (485)
T ss_dssp HHH---------TTCEEEEEECBC---HHHHHHHHHHHHHTT--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSC
T ss_pred HHh---------cCceEEEEeCCc---hHHHHHHHHHHHhCC--CcEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCC
Confidence 865 589999999985 236788999999876 6887 788874 45899999999999999 99999
Q ss_pred HHHHHHHhcCCCEEEcCCCCCC
Q 016053 373 RITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 373 ~~~lEAma~G~PVI~t~~gG~~ 394 (396)
++++||||||+|||+|+.||.+
T Consensus 380 ~~~lEAma~G~PvI~s~~gg~~ 401 (485)
T 1rzu_A 380 LTQLYALRYGCIPVVARTGGLA 401 (485)
T ss_dssp SHHHHHHHHTCEEEEESSHHHH
T ss_pred HHHHHHHHCCCCEEEeCCCChh
Confidence 9999999999999999998753
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=6.5e-34 Score=269.69 Aligned_cols=282 Identities=16% Similarity=0.132 Sum_probs=203.7
Q ss_pred cEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc------------
Q 016053 75 KLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG------------ 141 (396)
Q Consensus 75 ~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 141 (396)
|||+++++. ...||+++++.+++++|+++||+|++++...... .. .++++.....
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-------~~-----~~~~v~~~~~~~~~~~~~~~~~ 68 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-------CP-----KAFELIQVPVKSHTNHGRNAEY 68 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-------CC-----TTCEEEECCCCCSSHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-------CC-----CCcEEEEEccCcccchhhHHHH
Confidence 589999876 4458889999999999999999999999542211 10 1444433321
Q ss_pred ---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCch-hhh-----ccc--cccccceeec
Q 016053 142 ---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL-DYV-----KHL--PLVAGAMIDS 210 (396)
Q Consensus 142 ---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~-~~~-----~~~--~~~~~~~~~s 210 (396)
...+.+..+||+||+|....+.... ..... ...+.+++.|......... ... ..+ ..++.+++.|
T Consensus 69 ~~~l~~~i~~~~~Dvv~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s 144 (374)
T 2iw1_A 69 YAWVQNHLKEHPADRVVGFNKMPGLDVY--FAADV--CYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLT 144 (374)
T ss_dssp HHHHHHHHHHSCCSEEEESSCCTTCSEE--ECCSC--CHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESC
T ss_pred HHHHHHHHhccCCCEEEEecCCCCceee--ecccc--ccceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcC
Confidence 1223345799999999754322100 00000 0112233333321111110 011 111 2467777777
Q ss_pred cccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHH
Q 016053 211 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
....+.+.+ .+|++..++.+||||+|.+.|.+.... ..+.++++++|+++++++|+++|++.+.||++.+++
T Consensus 145 ~~~~~~~~~----~~~~~~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~ 216 (374)
T 2iw1_A 145 DKQIADFQK----HYQTEPERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIE 216 (374)
T ss_dssp HHHHHHHHH----HHCCCGGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHH
T ss_pred HHHHHHHHH----HhCCChhheEEecCCcCHHhcCcccch----hHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHH
Confidence 776665543 568888889999999999988654321 225678999999989999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCC
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
|++.+.+.. .++++|+|+|+|. .+.++++++++++.++|+|+|+.+++.++|++||++|+||. .|+
T Consensus 217 a~~~l~~~~------~~~~~l~i~G~g~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~--~e~ 282 (374)
T 2iw1_A 217 ALASLPESL------RHNTLLFVVGQDK------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAY--QEA 282 (374)
T ss_dssp HHHTSCHHH------HHTEEEEEESSSC------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCS--CCS
T ss_pred HHHHhHhcc------CCceEEEEEcCCC------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccc--cCC
Confidence 999875531 1589999999974 26788899999999999999999999999999999999999 999
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++|||+||+|||+|+.||..
T Consensus 283 ~~~~~~Ea~a~G~Pvi~~~~~~~~ 306 (374)
T 2iw1_A 283 AGIVLLEAITAGLPVLTTAVCGYA 306 (374)
T ss_dssp SCHHHHHHHHHTCCEEEETTSTTT
T ss_pred cccHHHHHHHCCCCEEEecCCCch
Confidence 999999999999999999999875
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=5.1e-33 Score=273.13 Aligned_cols=298 Identities=14% Similarity=0.106 Sum_probs=206.7
Q ss_pred cEEEEEeccC----CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--------hhh--hhh---hhcceEEE
Q 016053 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--------SLE--HKM---WDRGVQVI 137 (396)
Q Consensus 75 ~kIl~v~~~~----~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--------~~~--~~~---~~~~~~~~ 137 (396)
|||+++++.. ..||+++++.+|+++|.++||+|+|++...+........ .+. ..+ ...|+.++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence 5899999764 358889999999999999999999999643210000000 000 000 12456654
Q ss_pred EcCch--------------------------------hhhhh----ccCCcEEEEcCchhhHHHHHHHhcCCCcccccee
Q 016053 138 SAKGQ--------------------------------ETINT----ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVL 181 (396)
Q Consensus 138 ~~~~~--------------------------------~~~~~----~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv 181 (396)
..... ..+.+ ..+||+||+|+...+.....+.... ...|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~---~~~p~v 157 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARG---RPAKSV 157 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTT---CSSEEE
T ss_pred EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhcc---CCCCEE
Confidence 32110 01112 2689999999865444333222111 125688
Q ss_pred eeeeecccc-cCc-------------------------hhhhccccccccceeeccccHHHHHHHHHhhhcc--------
Q 016053 182 WWIHEMRGH-YFK-------------------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI-------- 227 (396)
Q Consensus 182 ~~~h~~~~~-~~~-------------------------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~-------- 227 (396)
+++|+.... ... ......+..++.+++.|....+.+.+. .+|.
T Consensus 158 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~~~~~~~~~~~~ 234 (485)
T 2qzs_A 158 FTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP---QFAYGMEGLLQQ 234 (485)
T ss_dssp EEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH---HHHTTCHHHHHH
T ss_pred EEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc---ccCcchHHHHHh
Confidence 999986311 000 001122356777888887766655432 1342
Q ss_pred cC--CCEEEEecCCccchhhhhhhh-----------HHHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHH
Q 016053 228 KM--PDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSF 292 (396)
Q Consensus 228 ~~--~k~~vI~ngid~~~~~~~~~~-----------~~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~ 292 (396)
+. .++.+||||+|.+.|.+..+. ......+..+|+++|+++ +.++|+++||+.+.||++.+++|+
T Consensus 235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 314 (485)
T 2qzs_A 235 RHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL 314 (485)
T ss_dssp HHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH
T ss_pred hccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH
Confidence 22 679999999999888654311 112234677899999976 779999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEE-EecCcC-CHHHHHHHcCEEEecCCCCCCC
Q 016053 293 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH-FVNKTL-TVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~~~-~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
+.+.+ ++++|+|+|+|+ ..+.+.+++++++++ ++|+ |.|..+ ++..+|++||++|+||. .|+
T Consensus 315 ~~l~~---------~~~~l~ivG~g~---~~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~ 378 (485)
T 2qzs_A 315 PGLLE---------QGGQLALLGAGD---PVLQEGFLAAAAEYP--GQVGVQIGYHEAFSHRIMGGADVILVPSR--FEP 378 (485)
T ss_dssp HHHHH---------TTCEEEEEEEEC---HHHHHHHHHHHHHST--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCS
T ss_pred HHHhh---------CCcEEEEEeCCc---hHHHHHHHHHHHhCC--CcEEEeCCCCHHHHHHHHHhCCEEEECCc--cCC
Confidence 99865 589999999985 236788999999886 6786 888874 45899999999999999 999
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++||||||+|||+|+.||..
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~ 402 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLA 402 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHH
T ss_pred CcHHHHHHHHCCCCEEECCCCCcc
Confidence 999999999999999999998753
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=2.6e-33 Score=269.44 Aligned_cols=289 Identities=13% Similarity=0.105 Sum_probs=206.5
Q ss_pred cEEEEEeccCCC-CChHHHHHHHHHHHHhCCCEEEEEeccCCCCch-hhhh--hhhhhhhhcceEEEEcC--chhhhhhc
Q 016053 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQKPSEED-EVIY--SLEHKMWDRGVQVISAK--GQETINTA 148 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (396)
|||+++++..+. ||+++++.+|+++|.++ |+|++++........ .... ................. ........
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 79 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDV 79 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHHHH
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHHHh
Confidence 589999876554 88889999999999999 999999844321100 0000 00000000000000000 11233355
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccc--cceeeccccHHHHHHHHHhhhc
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVA--GAMIDSHVTAEYWKNRTRERLR 226 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~g 226 (396)
.+||+||+|..............++|.. .+++...|...... .......+...+ .+++.|....+.+.+ +|
T Consensus 80 ~~~Div~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ii~~S~~~~~~~~~-----~~ 152 (413)
T 3oy2_A 80 HKPDIVMIYNDPIVIGNYLLAMGKCSHR-TKIVLYVDLVSKNI-RENLWWIFSHPKVVGVMAMSKCWISDICN-----YG 152 (413)
T ss_dssp HCCSEEEEEECHHHHHHHHHHGGGCCSC-CEEEEEECCCSBSC-CGGGGGGGGCTTEEEEEESSTHHHHHHHH-----TT
T ss_pred cCCCEEEEcchHHHHHHHHHHhccCCCC-Cceeeeccccchhh-HHHHHHHHhccCCceEEEcCHHHHHHHHH-----cC
Confidence 7999999996544433333334445543 34455555443222 222345566755 889999888777653 56
Q ss_pred ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC--CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhcc
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKL 304 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~--~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~ 304 (396)
. ..++.+||||+|.+.|. ..++++++++ +.++|+++|++.+.||++.+++|++++.+.
T Consensus 153 ~-~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~------ 212 (413)
T 3oy2_A 153 C-KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK------ 212 (413)
T ss_dssp C-CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH------
T ss_pred C-CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh------
Confidence 5 57899999999998772 2467788877 899999999999999999999999998763
Q ss_pred CCCCEEEEEEecCCCcc-chHHHHHHHHHHhcCCCCc-------EEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHH
Q 016053 305 EVPSVHAVIIGSDMNAQ-TKFESELRNYVMQKKIQDR-------VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI 374 (396)
Q Consensus 305 ~~~~~~l~ivG~g~~~~-~~~~~~l~~~~~~~~l~~~-------V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~ 374 (396)
+++++|+|+|+|+..+ ....+.+++++++++++++ |.|.|++ +++.++|++||++|+||. .|+||++
T Consensus 213 -~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~ 289 (413)
T 3oy2_A 213 -YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLC 289 (413)
T ss_dssp -CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHH
T ss_pred -CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcH
Confidence 3899999999987432 2245889999999999987 8888986 589999999999999999 9999999
Q ss_pred HHHHHhcCCCEEEcCCCCCC
Q 016053 375 TIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 375 ~lEAma~G~PVI~t~~gG~~ 394 (396)
++|||+||+|||+|+.||.+
T Consensus 290 ~lEAma~G~PvI~s~~~g~~ 309 (413)
T 3oy2_A 290 SAEGAVLGKPLIISAVGGAD 309 (413)
T ss_dssp HHHHHTTTCCEEEECCHHHH
T ss_pred HHHHHHcCCCEEEcCCCChH
Confidence 99999999999999998853
No 11
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=9e-32 Score=265.75 Aligned_cols=303 Identities=19% Similarity=0.161 Sum_probs=202.8
Q ss_pred ccEEEEEeccCCC----CChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhh------hhh--------hhhhcceE
Q 016053 74 SKLVLLVSHELSL----SGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS------LEH--------KMWDRGVQ 135 (396)
Q Consensus 74 ~~kIl~v~~~~~~----gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~------~~~--------~~~~~~~~ 135 (396)
.|||||++++..+ ||-..++..|.++|+++||+|.|+++..+......... +.. .....|++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 88 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVD 88 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCce
Confidence 4699999987443 77789999999999999999999996543211100000 000 01112333
Q ss_pred EEEcCch----------------------------h--hh-------h-------------hccCCcEEEEcCchhhHHH
Q 016053 136 VISAKGQ----------------------------E--TI-------N-------------TALKADLIVLNTAVAGKWL 165 (396)
Q Consensus 136 ~~~~~~~----------------------------~--~~-------~-------------~~~~~DiV~~~~~~~~~~~ 165 (396)
++.+... + .+ . ....+||+|+|+...+...
T Consensus 89 ~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l~~ 168 (536)
T 3vue_A 89 RVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLA 168 (536)
T ss_dssp EEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGSTHH
T ss_pred EEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHHHH
Confidence 3211000 0 00 0 0124578889987655443
Q ss_pred HHHHhcCC---Cccccceeeeeeeccc--cc---------Cchh----------------------hhccccccccceee
Q 016053 166 DAVLKEDV---PRVLPNVLWWIHEMRG--HY---------FKLD----------------------YVKHLPLVAGAMID 209 (396)
Q Consensus 166 ~~~~~~~~---~~~~~~vv~~~h~~~~--~~---------~~~~----------------------~~~~~~~~~~~~~~ 209 (396)
..++.... .....++++++|+... .+ .... .+..+..+|.++++
T Consensus 169 ~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~tV 248 (536)
T 3vue_A 169 SYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTV 248 (536)
T ss_dssp HHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEEES
T ss_pred HHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEEEc
Confidence 33332211 1123679999997531 10 0000 01112356778888
Q ss_pred ccccHHHHHHHHHhhhc------ccCCCEEEEecCCccchhhhhhh------------hHHHHHhHHHHHHHcCCC--CC
Q 016053 210 SHVTAEYWKNRTRERLR------IKMPDTYVVHLGNSKELMEVAED------------NVAKRVLREHVRESLGVR--NE 269 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g------~~~~k~~vI~ngid~~~~~~~~~------------~~~~~~~~~~~r~~~g~~--~~ 269 (396)
|...++.+.+.. .+| ....++.+|+||||.+.|.|..+ ...+...+..+++.+|++ ++
T Consensus 249 S~~~a~ei~~~~--~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 249 SPYYAEELISGI--ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp CHHHHHHHHTTC--CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred CHHHhhhhhccc--ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 877766554321 111 23568999999999999877532 123445677888999885 56
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 347 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~-- 347 (396)
.++|+++||+.++||++.+++|++++.+ .+.+|+++|.|. ..+...++....+++ +++.+.+..
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~---------~~~~l~l~G~G~---~~~~~~~~~~~~~~~--~~v~~~~~~~~ 392 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQ---------EDVQIVLLGTGK---KKFEKLLKSMEEKYP--GKVRAVVKFNA 392 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTT---------SSCEEEEECCBC---HHHHHHHHHHHHHST--TTEEEECSCCH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHh---------hCCeEEEEeccC---chHHHHHHHHHhhcC--CceEEEEeccH
Confidence 7999999999999999999999998754 578999999885 335556666666554 679888875
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
+++..+|+.||++|+||. .|+||++++|||+||+|||+|++||.+
T Consensus 393 ~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp HHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred HHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCch
Confidence 568899999999999999 999999999999999999999999854
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.4e-32 Score=257.68 Aligned_cols=250 Identities=16% Similarity=0.055 Sum_probs=188.8
Q ss_pred ccccEEEEEecc--------C------CCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEE
Q 016053 72 MKSKLVLLVSHE--------L------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (396)
Q Consensus 72 m~~~kIl~v~~~--------~------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (396)
|++|||+++++. . ..||+++++.+++++|.++||+|++++....... ..++.++
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~------------~~~~~~~ 68 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG------------RPGLTVV 68 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC------------STTEEEC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC------------CCcceec
Confidence 567899999987 1 3488899999999999999999999996543211 1234443
Q ss_pred EcCc---hhhhhhccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccH
Q 016053 138 SAKG---QETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTA 214 (396)
Q Consensus 138 ~~~~---~~~~~~~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 214 (396)
.... ...+.+..+||+||+|........ +. ....+ +++.|+..... ...+.+++.|....
T Consensus 69 ~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~-----~~~~p-v~~~h~~~~~~---------~~~d~ii~~S~~~~ 131 (342)
T 2iuy_A 69 PAGEPEEIERWLRTADVDVVHDHSGGVIGPA--GL-----PPGTA-FISSHHFTTRP---------VNPVGCTYSSRAQR 131 (342)
T ss_dssp SCCSHHHHHHHHHHCCCSEEEECSSSSSCST--TC-----CTTCE-EEEEECSSSBC---------SCCTTEEESCHHHH
T ss_pred cCCcHHHHHHHHHhcCCCEEEECCchhhHHH--Hh-----hcCCC-EEEecCCCCCc---------ccceEEEEcCHHHH
Confidence 3322 234445679999999996544321 11 11256 88899874221 12778888887766
Q ss_pred HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHH
Q 016053 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYE 294 (396)
Q Consensus 215 ~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~ 294 (396)
+.+.+ ..++.+||||+|.+.|.+... . .+++..|+++|++.+.||++.+++|++.
T Consensus 132 ~~~~~---------~~~~~vi~ngvd~~~~~~~~~---------------~-~~~~~~i~~vG~~~~~Kg~~~li~a~~~ 186 (342)
T 2iuy_A 132 AHCGG---------GDDAPVIPIPVDPARYRSAAD---------------Q-VAKEDFLLFMGRVSPHKGALEAAAFAHA 186 (342)
T ss_dssp HHTTC---------CTTSCBCCCCBCGGGSCCSTT---------------C-CCCCSCEEEESCCCGGGTHHHHHHHHHH
T ss_pred HHHhc---------CCceEEEcCCCChhhcCcccc---------------c-CCCCCEEEEEeccccccCHHHHHHHHHh
Confidence 65432 467999999999988765321 1 1345689999999999999999999987
Q ss_pred HHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC--CHHHHHHHcCEEEecCC-------
Q 016053 295 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQ------- 365 (396)
Q Consensus 295 l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~--~~~~~~~~aDv~v~pS~------- 365 (396)
+ +++|+|+|+|+ +.+.+++++++++ ++|+|+|+++ ++.++|++||++|+||.
T Consensus 187 ~------------~~~l~i~G~g~-----~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~ 247 (342)
T 2iuy_A 187 C------------GRRLVLAGPAW-----EPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWG 247 (342)
T ss_dssp H------------TCCEEEESCCC-----CHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTC
T ss_pred c------------CcEEEEEeCcc-----cHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccc
Confidence 4 68999999986 6788888888887 7999999984 67999999999999998
Q ss_pred -CCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 366 -AWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 366 -~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
.|.|+||++++|||+||+|||+|+.||.+
T Consensus 248 ~~~~E~~~~~~~EAma~G~PvI~s~~~~~~ 277 (342)
T 2iuy_A 248 GIWCEPGATVVSEAAVSGTPVVGTGNGCLA 277 (342)
T ss_dssp SCCCCCCCHHHHHHHHTTCCEEECCTTTHH
T ss_pred cccccCccHHHHHHHhcCCCEEEcCCCChH
Confidence 13799999999999999999999998854
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.97 E-value=1.2e-30 Score=250.03 Aligned_cols=283 Identities=16% Similarity=0.096 Sum_probs=192.8
Q ss_pred cccccEEEEEeccCC--CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhh-hh--hhh-cceEEEEc-----
Q 016053 71 FMKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLE-HK--MWD-RGVQVISA----- 139 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~----- 139 (396)
+.++|||+++++... .||+++++.+++++|.+.||+|++++............... .. +.. .....+..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATH 96 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHH
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHH
Confidence 334579999997643 38888999999999999999999999554321000000000 00 000 00000111
Q ss_pred CchhhhhhccCCcEEEEcCchhhHHHHH-HHhcCCCccccceeeeeeecccccCc-hh----hhccccccccceeecccc
Q 016053 140 KGQETINTALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPNVLWWIHEMRGHYFK-LD----YVKHLPLVAGAMIDSHVT 213 (396)
Q Consensus 140 ~~~~~~~~~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~vv~~~h~~~~~~~~-~~----~~~~~~~~~~~~~~s~~~ 213 (396)
.....+.+..+||+||+|......+... ....+ .++++++|+....... .. ....++.++.+++.|...
T Consensus 97 ~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 171 (406)
T 2gek_A 97 RKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE-----GPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLA 171 (406)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE-----SSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHH
T ss_pred HHHHHHHHhcCCCEEEECCccchHHHHHHHHhcC-----CCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 1122334457999999998654333222 22233 4588888885322100 00 113446788888888777
Q ss_pred HHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc-cCCCCHHHHHHHH
Q 016053 214 AEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLFLHSF 292 (396)
Q Consensus 214 ~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l-~~~Kg~~~li~a~ 292 (396)
.+.+.+ .+ +.+++ +||||+|.+.|.+... ..+++++++.|+++|++ .+.||++.+++|+
T Consensus 172 ~~~~~~----~~--~~~~~-vi~~~v~~~~~~~~~~-------------~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 172 RRWQME----AL--GSDAV-EIPNGVDVASFADAPL-------------LDGYPREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp HHHHHH----HH--SSCEE-ECCCCBCHHHHHTCCC-------------CTTCSCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred HHHHHH----hc--CCCcE-EecCCCChhhcCCCch-------------hhhccCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 766554 23 34568 9999999887754321 12233456899999999 9999999999999
Q ss_pred HHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCC
Q 016053 293 YESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGEC 370 (396)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~ 370 (396)
+.+.+ ++++++|+|+|++. . +.++++++++ .++|+|+|++ +++.++|+.||++|+||. |.|+
T Consensus 232 ~~l~~-------~~~~~~l~i~G~~~-----~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~ 295 (406)
T 2gek_A 232 PKLVA-------RFPDVEILIVGRGD-----E-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHL-GGES 295 (406)
T ss_dssp HHHHT-------TSTTCEEEEESCSC-----H-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCC-SCCS
T ss_pred HHHHH-------HCCCeEEEEEcCCc-----H-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCC-CCCC
Confidence 98865 44899999999986 5 7888888876 6899999998 567999999999999984 2899
Q ss_pred ccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 371 FGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 371 fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
||++++|||+||+|||+++.||.+
T Consensus 296 ~~~~~~Ea~a~G~PvI~~~~~~~~ 319 (406)
T 2gek_A 296 FGIVLVEAMAAGTAVVASDLDAFR 319 (406)
T ss_dssp SCHHHHHHHHHTCEEEECCCHHHH
T ss_pred CchHHHHHHHcCCCEEEecCCcHH
Confidence 999999999999999999998753
No 14
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.97 E-value=1.5e-30 Score=265.33 Aligned_cols=307 Identities=14% Similarity=0.148 Sum_probs=202.1
Q ss_pred ccEEEEEeccCC-----------CCChHHHHH--------HHHHHHHhCCCEEE----EEeccCCCCchh-hhhhhhhhh
Q 016053 74 SKLVLLVSHELS-----------LSGGPLLLM--------ELAFLLRGVGTKVN----WITIQKPSEEDE-VIYSLEHKM 129 (396)
Q Consensus 74 ~~kIl~v~~~~~-----------~gG~~~~~~--------~l~~~L~~~G~~V~----vi~~~~~~~~~~-~~~~~~~~~ 129 (396)
.++|++++.-.. .||...++. +|++.|.++||+|+ |+|...+..... .....+...
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~ 357 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVY 357 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECT
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeec
Confidence 368999985432 255568887 47777788999886 888443322111 111111111
Q ss_pred hhcceEEEEcCchh---------------------------hhhh--ccCCcEEEEcCchhhHHHHH-HHhcCCCccccc
Q 016053 130 WDRGVQVISAKGQE---------------------------TINT--ALKADLIVLNTAVAGKWLDA-VLKEDVPRVLPN 179 (396)
Q Consensus 130 ~~~~~~~~~~~~~~---------------------------~~~~--~~~~DiV~~~~~~~~~~~~~-~~~~~~~~~~~~ 179 (396)
...|+.++..+... .+.. ..+||+||+|...++..... +...++ |
T Consensus 358 ~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gv-----P 432 (816)
T 3s28_A 358 DSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGV-----T 432 (816)
T ss_dssp TCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTC-----C
T ss_pred CcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCC-----C
Confidence 12366665443211 0111 24799999998665543332 333454 4
Q ss_pred eeeeeeecccccCc--h--------hh---------hccccccccceeeccccHHHHHHH---HHhhh------------
Q 016053 180 VLWWIHEMRGHYFK--L--------DY---------VKHLPLVAGAMIDSHVTAEYWKNR---TRERL------------ 225 (396)
Q Consensus 180 vv~~~h~~~~~~~~--~--------~~---------~~~~~~~~~~~~~s~~~~~~~~~~---~~~~~------------ 225 (396)
++++.|........ . .+ ...+..++.+++.|....+.+.+. .....
T Consensus 433 ~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~ 512 (816)
T 3s28_A 433 QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVH 512 (816)
T ss_dssp EEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEE
T ss_pred EEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhccc
Confidence 78888875311110 0 00 013457788888887665532111 10000
Q ss_pred --cccCCCEEEEecCCccchhhhhhhhHH------HHH-----hHHHHHHHcCC--CCCCEEEEEEecccCCCCHHHHHH
Q 016053 226 --RIKMPDTYVVHLGNSKELMEVAEDNVA------KRV-----LREHVRESLGV--RNEDLLFAIINSVSRGKGQDLFLH 290 (396)
Q Consensus 226 --g~~~~k~~vI~ngid~~~~~~~~~~~~------~~~-----~~~~~r~~~g~--~~~~~~il~vG~l~~~Kg~~~li~ 290 (396)
+...+++.|||||+|.+.|.+...... ... +..+.++.+|+ ++++++|+++||+.+.||++.+++
T Consensus 513 gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIe 592 (816)
T 3s28_A 513 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVE 592 (816)
T ss_dssp SCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHH
T ss_pred ccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHH
Confidence 122348999999999998876532110 000 01123456676 678899999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCEEEEEEecCCC------ccchHHHHHHHHHHhcCCCCcEEEecCc------CCHHHHHH-Hc
Q 016053 291 SFYESLELIKEKKLEVPSVHAVIIGSDMN------AQTKFESELRNYVMQKKIQDRVHFVNKT------LTVAPYLA-AI 357 (396)
Q Consensus 291 a~~~l~~~~~~~~~~~~~~~l~ivG~g~~------~~~~~~~~l~~~~~~~~l~~~V~~~g~~------~~~~~~~~-~a 357 (396)
|++++.+.. ++++|+|+|+|.+ .+.++.+.++++++++++.++|.|+|++ +++..+|+ ++
T Consensus 593 A~~~L~~~~-------~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aa 665 (816)
T 3s28_A 593 WYGKNTRLR-------ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK 665 (816)
T ss_dssp HHHHCHHHH-------HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhC-------CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcC
Confidence 999986532 6899999999872 1123678899999999999999999965 45788888 67
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|++|+||. .|+||++++||||||+|||+|+.||..
T Consensus 666 DvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~ 700 (816)
T 3s28_A 666 GAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPA 700 (816)
T ss_dssp CEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHH
T ss_pred eEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChH
Confidence 99999999 999999999999999999999999864
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.96 E-value=3.8e-28 Score=232.91 Aligned_cols=274 Identities=12% Similarity=0.127 Sum_probs=177.8
Q ss_pred cccEEEEEeccCCCC---ChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhh----hhh-hc--ceEEEEcCc-
Q 016053 73 KSKLVLLVSHELSLS---GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEH----KMW-DR--GVQVISAKG- 141 (396)
Q Consensus 73 ~~~kIl~v~~~~~~g---G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~----~~~-~~--~~~~~~~~~- 141 (396)
++|||+++++.+.++ |+.+.+.+++++|.++||+|+|++...... ......+.. .+. .. ...+.....
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKDLQSFKSFKYVMPEEDKDFALQIVPFNDR 123 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHHHGGGTTSEECCTTCCCCCSEEEEECSCC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHHHHhhhccceeeccCCccccceeeecccc
Confidence 446999999887764 777789999999999999999999653221 111000100 000 00 012222211
Q ss_pred hhhhhhccCCcEEEEcCchhhHHHHHHH-----hcCCCccccceeeeeeecccccCchhhh-----ccccccc--cceee
Q 016053 142 QETINTALKADLIVLNTAVAGKWLDAVL-----KEDVPRVLPNVLWWIHEMRGHYFKLDYV-----KHLPLVA--GAMID 209 (396)
Q Consensus 142 ~~~~~~~~~~DiV~~~~~~~~~~~~~~~-----~~~~~~~~~~vv~~~h~~~~~~~~~~~~-----~~~~~~~--~~~~~ 209 (396)
........++|+||++..........+. ..+.+ ..+.++.+|++...++..... ..+...+ .++++
T Consensus 124 ~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 201 (413)
T 2x0d_A 124 YNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIP--PNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFN 201 (413)
T ss_dssp TTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCC--CCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEE
T ss_pred ccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccc--cCcEEEEEeechhhcCccChHHHHHHHHhccCCceEEEEc
Confidence 1111123579999999865444333221 01111 134566666654333221111 1222222 35566
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecc-cCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l-~~~Kg~~~l 288 (396)
|....+.+.+ .|++..++.++|||+|.+.|.+. ..+ .+++..|+++||+ .+.||++.+
T Consensus 202 S~~~~~~l~~-----~g~~~~~~~~i~~g~d~~~~~~~---------------~~~-~~~~~~il~~gr~~~~~Kg~~~l 260 (413)
T 2x0d_A 202 SELLKQYFNN-----KGYNFTDEYFFQPKINTTLKNYI---------------NDK-RQKEKIILVYGRPSVKRNAFTLI 260 (413)
T ss_dssp SHHHHHHHHH-----HTCCCSEEEEECCCCCHHHHTTT---------------TSC-CCCCSEEEEEECTTCGGGCHHHH
T ss_pred CHHHHHHHHH-----cCCCCCceEEeCCCcCchhhccc---------------ccc-cCCCCEEEEEecCchhccCHHHH
Confidence 6666655543 35555678999999998765321 111 2455678889996 688999999
Q ss_pred HHHHHHHHHHHHhhccCCC---CEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 289 LHSFYESLELIKEKKLEVP---SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~---~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
++|++.+.+.. | +++|+++|++... .++++.++|+|+|.+ +++.++|++||++|+|
T Consensus 261 i~A~~~l~~~~-------~~~~~~~l~ivG~~~~~------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~p 321 (413)
T 2x0d_A 261 VEALKIFVQKY-------DRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISL 321 (413)
T ss_dssp HHHHHHHHHHC-------TTGGGCEEEEEESCCCC------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECC
T ss_pred HHHHHHHHHhC-------CCCCceEEEEEcCCchh------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEe
Confidence 99999986532 4 4899999998621 346677899999986 7899999999999999
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|. .|+||++++||||||+|||+++.|
T Consensus 322 S~--~E~~g~~~lEAmA~G~PVV~~~~g 347 (413)
T 2x0d_A 322 MI--SPHPSYPPLEMAHFGLRVITNKYE 347 (413)
T ss_dssp CS--SSSCCSHHHHHHHTTCEEEEECBT
T ss_pred cC--CCCCCcHHHHHHhCCCcEEEeCCC
Confidence 99 999999999999999999996543
No 16
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=4.2e-27 Score=235.50 Aligned_cols=272 Identities=11% Similarity=0.026 Sum_probs=186.2
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHH--HHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc-----hh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-----QE 143 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~--L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 143 (396)
..++|||+++++....+|+++++.++++. +.+.||+|++++...... .. +...+...+ .+..... ..
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~-~~----~~~~~~~~~-~~~~~~~~~~~~l~ 275 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDG-ST----LRTRLAQAS-TLHDVTALGHLATA 275 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCS-CH----HHHHHHHTS-EEEECTTCCHHHHH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCCCc-cH----HHHHHHhcC-eEEECCCCCHHHHH
Confidence 34567999999988888899999999999 788999999998543211 11 122223333 3333321 23
Q ss_pred hhhhccCCcEEEEcCchh-hHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHH
Q 016053 144 TINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTR 222 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~~~~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 222 (396)
.+.+..+||+||.+.... ...+....... .+++.+.|...... ... ...+...+.+++.|.....
T Consensus 276 ~~i~~~~~Div~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~-~~~~~~~d~~i~~s~~~~~------- 341 (568)
T 2vsy_A 276 KHIRHHGIDLLFDLRGWGGGGRPEVFALRP-----APVQVNWLAYPGTS-GAP-WMDYVLGDAFALPPALEPF------- 341 (568)
T ss_dssp HHHHHTTCSEEEECSSCTTCSSCHHHHTCC-----SSEEEEESSSSSCC-CCT-TCCEEEECTTTSCTTTGGG-------
T ss_pred HHHHhCCCCEEEECCCCCCcchHHHHhcCC-----CceeEeeecCCccc-CCC-CceEEEECCCcCCcccccC-------
Confidence 344568999999865322 11111111222 23444444331111 101 1111235666666654322
Q ss_pred hhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 223 ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 223 ~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
++ +++.+|||.++.....+.. .+...|+++|++++.+ ++++|++.+ ||++.+++++.++.+.
T Consensus 342 --~~---~~i~~ipn~~~~~~~~~~~-------~~~~~r~~~~~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~~~---- 403 (568)
T 2vsy_A 342 --YS---EHVLRLQGAFQPSDTSRVV-------AEPPSRTQCGLPEQGV-VLCCFNNSY-KLNPQSMARMLAVLRE---- 403 (568)
T ss_dssp --CS---SEEEECSSCSCCCCTTCCC-------CCCCCTGGGTCCTTSC-EEEECCCGG-GCCHHHHHHHHHHHHH----
T ss_pred --Cc---ceeEcCCCcCCCCCCCCCC-------CCCCCccccCCCCCCE-EEEeCCccc-cCCHHHHHHHHHHHHh----
Confidence 22 6799999965433211100 0123577889876665 558999999 9999999999998653
Q ss_pred ccCCCCEEEEEEe-cCCCccchHHHHHHHHHHhcCCC-CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHH
Q 016053 303 KLEVPSVHAVIIG-SDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 303 ~~~~~~~~l~ivG-~g~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEA 378 (396)
.|+++|+|+| +|+ ..+.+++.++++|+. ++|+|+|++ +++.++|+.||++|+||. . +||++++||
T Consensus 404 ---~~~~~l~i~G~~g~-----~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEA 472 (568)
T 2vsy_A 404 ---VPDSVLWLLSGPGE-----ADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDA 472 (568)
T ss_dssp ---CTTCEEEEECCSTT-----HHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHH
T ss_pred ---CCCcEEEEecCCHH-----HHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHH
Confidence 3899999999 765 789999999999998 999999998 489999999999999999 8 999999999
Q ss_pred HhcCCCEEE-------cCCC
Q 016053 379 MAFQLPVLV-------LSEL 391 (396)
Q Consensus 379 ma~G~PVI~-------t~~g 391 (396)
|+||+|||+ |++|
T Consensus 473 ma~G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 473 LWTGCPVLTTPGETFAARVA 492 (568)
T ss_dssp HHTTCCEEBCCCSSGGGSHH
T ss_pred HhCCCCEEeccCCCchHHHH
Confidence 999999999 9998
No 17
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.94 E-value=9.7e-26 Score=212.83 Aligned_cols=252 Identities=15% Similarity=0.068 Sum_probs=174.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------------ 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 142 (396)
|||++++. ..||.+.....++++|.++||+|++++..... ....+...|+++......
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--------EADLVPKHGIEIDFIRISGLRGKGIKALIA 76 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--------HHHHGGGGTCEEEECCCCCCTTCCHHHHHT
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCCcc--------hhhhccccCCceEEecCCccCcCccHHHHH
Confidence 79999973 34788899999999999999999999965431 111222335555433211
Q ss_pred ------------hhhhhccCCcEEEEcCchhhHH-HHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceee
Q 016053 143 ------------ETINTALKADLIVLNTAVAGKW-LDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMID 209 (396)
Q Consensus 143 ------------~~~~~~~~~DiV~~~~~~~~~~-~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
..+.+..+||+||++....... ...+...++| ++.+.|+... ........+..+.+++.
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-----~v~~~~~~~~---~~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 77 APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-----VVLHEQNGIA---GLTNKWLAKIATKVMQA 148 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-----EEEEECSSSC---CHHHHHHTTTCSEEEES
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-----EEEEecCCCC---cHHHHHHHHhCCEEEec
Confidence 1222346999999998653322 2233344544 5666665321 11112223345555554
Q ss_pred ccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCE-EEEEEecccCCCCHHHH
Q 016053 210 SHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLF 288 (396)
Q Consensus 210 s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~-~il~vG~l~~~Kg~~~l 288 (396)
+... ++ ++.+++||+|.+.+.+.. .+++++++++++ ++++.|++.+.||.+.+
T Consensus 149 ~~~~-------------~~--~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~~~~l 202 (364)
T 1f0k_A 149 FPGA-------------FP--NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARILNQTM 202 (364)
T ss_dssp STTS-------------SS--SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHHHHHH
T ss_pred Chhh-------------cC--CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHHHHHH
Confidence 4321 12 578999999987664321 245667766665 45556799999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCC
Q 016053 289 LHSFYESLELIKEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAW 367 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~ 367 (396)
++|++.+. .+++ ++++|++. .+++++.+++++++ +|+|+|+++++.++|++||++|+||.
T Consensus 203 i~a~~~l~----------~~~~~l~i~G~~~------~~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~sg-- 263 (364)
T 1f0k_A 203 PQVAAKLG----------DSVTIWHQSGKGS------QQSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRSG-- 263 (364)
T ss_dssp HHHHHHHG----------GGEEEEEECCTTC------HHHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECCC--
T ss_pred HHHHHHhc----------CCcEEEEEcCCch------HHHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECCc--
Confidence 99999873 2678 56788874 36788888888874 79999999999999999999999983
Q ss_pred CCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 368 GECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 368 ~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
|++++|||+||+|||+++.+|.
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHK 285 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCT
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCC
Confidence 8999999999999999999975
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.93 E-value=9.5e-26 Score=216.16 Aligned_cols=258 Identities=12% Similarity=0.111 Sum_probs=167.7
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhh--------hhhhhhhhcceEEEEcCc--
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY--------SLEHKMWDRGVQVISAKG-- 141 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-- 141 (396)
+.|||+++++. +.. |.......+++.|.++| +|+|++..... ...... .........|+.++....
T Consensus 13 ~~MkIl~is~~~~p~-~~~~~~~~l~~~l~~~G-~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~ 89 (406)
T 2hy7_A 13 RRPCYLVLSSHDFRT-PRRANIHFITDQLALRG-TTRFFSLRYSR-LSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTV 89 (406)
T ss_dssp CCSCEEEEESSCTTS-SSCCHHHHHHHHHHHHS-CEEEEECSCBT-THHHHTCTTGGGGGGTTSEEEETTEEEEECCBSS
T ss_pred CCceEEEEecccCCC-hhhhhHhHHHHHHHhCC-ceEEEEecccH-HHHhhccchhhhhccCccceecCCeEEEeecccc
Confidence 34689999986 443 22234455777888999 99999632110 000000 000001124566543211
Q ss_pred --------h-h----------------hhhh-ccCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccc-c-c--
Q 016053 142 --------Q-E----------------TINT-ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG-H-Y-- 191 (396)
Q Consensus 142 --------~-~----------------~~~~-~~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~-~-~-- 191 (396)
. + .+.+ ..++|+||.+......+...+...+.| ++.+.|+... . .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~~~~~~~~~~~~p-----~v~~~h~~~~~~~~~~ 164 (406)
T 2hy7_A 90 HPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPA-----AKLVYRASDGLSTINV 164 (406)
T ss_dssp CCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGGGGHHHHHHHCTT-----SEEEEEESSCHHHHTC
T ss_pred CCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHHHHHHHHHHhCCC-----EEEEEeccchhhcccc
Confidence 0 0 0000 137999996655444422333444543 6667776421 1 0
Q ss_pred ---CchhhhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC
Q 016053 192 ---FKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 268 (396)
Q Consensus 192 ---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~ 268 (396)
........++.++.+++.|....+.+.+ .+ ++.+||||+|.+.|.+.... . .+
T Consensus 165 ~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~-----~~----~i~vipngvd~~~f~~~~~~--------------~-~~ 220 (406)
T 2hy7_A 165 ASYIEREFDRVAPTLDVIALVSPAMAAEVVS-----RD----NVFHVGHGVDHNLDQLGDPS--------------P-YA 220 (406)
T ss_dssp CHHHHHHHHHHGGGCSEEEESCGGGGGGCSC-----ST----TEEECCCCBCTTHHHHHCSC--------------S-CC
T ss_pred cHHHHHHHHHHHHhCCEEEEcCHHHHHHHHh-----cC----CEEEEcCCcChHhcCccccc--------------c-cC
Confidence 1111234456788899998887765432 22 79999999999888543210 1 12
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc-
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 347 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~- 347 (396)
+.++|+|+|++.+.||+ ++++ .+ +.++++|+|+|+|+ ++++++.++|+|+|++
T Consensus 221 ~~~~i~~vGrl~~~Kg~---~~~l---~~-------~~~~~~l~ivG~g~-------------~~~~~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 221 EGIHAVAVGSMLFDPEF---FVVA---SK-------AFPQVTFHVIGSGM-------------GRHPGYGDNVIVYGEMK 274 (406)
T ss_dssp SSEEEEEECCTTBCHHH---HHHH---HH-------HCTTEEEEEESCSS-------------CCCTTCCTTEEEECCCC
T ss_pred CCcEEEEEeccccccCH---HHHH---HH-------hCCCeEEEEEeCch-------------HHhcCCCCCEEEcCCCC
Confidence 34899999999999999 3333 22 23899999999873 6677888999999997
Q ss_pred -CCHHHHHHHcCEEEecCCCCCCCccHHHHHHH-------hcCCCEEEcCC
Q 016053 348 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAM-------AFQLPVLVLSE 390 (396)
Q Consensus 348 -~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm-------a~G~PVI~t~~ 390 (396)
+++.++|++||++|+||. .|+||++++||| |||+|||+|+.
T Consensus 275 ~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~ 323 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA 323 (406)
T ss_dssp HHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG
T ss_pred HHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh
Confidence 689999999999999999 999999999999 99999999974
No 19
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.90 E-value=7.9e-23 Score=198.66 Aligned_cols=156 Identities=10% Similarity=0.030 Sum_probs=116.4
Q ss_pred CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 230 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
.++.+||||||.+.|.+.......+. +..+|++++ ++++|+++||+.+.||++.+++|++++.+..++. ..++
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~---~~~v 291 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH---HGKI 291 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG---TTTE
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccc---cCcE
Confidence 56899999999998865321111111 456888886 5789999999999999999999999987754331 1258
Q ss_pred EEEEEecCCCccch----HHHHHHHHHHhcC----CC--CcEEEe-cCc--CCHHHHHHHcCEEEecCCCCCCCccHHHH
Q 016053 310 HAVIIGSDMNAQTK----FESELRNYVMQKK----IQ--DRVHFV-NKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI 376 (396)
Q Consensus 310 ~l~ivG~g~~~~~~----~~~~l~~~~~~~~----l~--~~V~~~-g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~l 376 (396)
+|+++|....++.+ +++++++++.+++ .. ..|+|+ |.+ +++..+|++||++|+||. .||||++++
T Consensus 292 ~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~l 369 (482)
T 1uqt_A 292 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAK 369 (482)
T ss_dssp EEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHH
T ss_pred EEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHH
Confidence 89999974322222 3455566655432 11 136654 654 789999999999999999 999999999
Q ss_pred HHHhcCC-----CEEEcCCCCCC
Q 016053 377 EAMAFQL-----PVLVLSELHPS 394 (396)
Q Consensus 377 EAma~G~-----PVI~t~~gG~~ 394 (396)
||||||+ |||+|+.+|.+
T Consensus 370 EAmA~g~~~~~gpvV~S~~~G~~ 392 (482)
T 1uqt_A 370 EYVAAQDPANPGVLVLSQFAGAA 392 (482)
T ss_dssp HHHHHSCTTSCCEEEEETTBGGG
T ss_pred HHHHhCCCCCCCCEEEECCCCCH
Confidence 9999997 89999988764
No 20
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.90 E-value=3.6e-23 Score=195.88 Aligned_cols=279 Identities=13% Similarity=0.129 Sum_probs=168.0
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-C-CEEEEEeccCCCCchhhhhhhhhhhhhcceEE-E--Ec--C
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-I--SA--K 140 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~--~ 140 (396)
|..|+++|||++++...+.. .....+++.|+++ | ++|.+++...... . ........++.. + .. .
T Consensus 2 ~~~m~~~mkIl~v~~~~~~~---~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~ 72 (375)
T 3beo_A 2 PVDMTERLKVMTIFGTRPEA---IKMAPLVLELQKHPEKIESIVTVTAQHRQ--M----LDQVLSIFGITPDFDLNIMKD 72 (375)
T ss_dssp CCCCSSCEEEEEEECSHHHH---HHHHHHHHHHTTCTTTEEEEEEECCSSSH--H----HHHHHHHHTCCCSEECCCCCT
T ss_pred CCCCCcCceEEEEecCcHHH---HHHHHHHHHHHhCCCCCCeEEEEcCCCHH--H----HHHHHHHcCCCCccccccCCC
Confidence 33455668999998543222 2456778888876 4 8887776433221 0 001111112211 1 11 0
Q ss_pred --c-----------hhhhhhccCCcEEEEcCch-hhHHH-HHHHhcCCCccccceeeeeeeccccc----Cchhhh-ccc
Q 016053 141 --G-----------QETINTALKADLIVLNTAV-AGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYV-KHL 200 (396)
Q Consensus 141 --~-----------~~~~~~~~~~DiV~~~~~~-~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~-~~~ 200 (396)
. ...+.+..+||+||+|+.. ..... ..+...++| ++++.|...... +..... +.+
T Consensus 73 ~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-----~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T 3beo_A 73 RQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-----VGHVEAGLRTWDKYSPYPEEMNRQLT 147 (375)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-----EEEESCCCCCSCTTSSTTHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-----EEEEecccccccccCCChhHhhhhHH
Confidence 0 1233345799999998753 22221 223344544 555555432111 011111 112
Q ss_pred -cccccceeeccccHHHHHHHHHhhhcccCCCEEEEecC-CccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEec
Q 016053 201 -PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 278 (396)
Q Consensus 201 -~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ng-id~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~ 278 (396)
+..+.+++.|....+.+. .+|++++++.+|+|| +|...+.+... .+.++++++ ++++++++++||
T Consensus 148 ~~~~d~ii~~s~~~~~~~~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~------~~~~~~~~~--~~~~~vl~~~gr 214 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQ-----KENKDESRIFITGNTAIDALKTTVKET------YSHPVLEKL--GNNRLVLMTAHR 214 (375)
T ss_dssp HHHCSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHCCSS------CCCHHHHTT--TTSEEEEEECCC
T ss_pred hhhhheeeCCCHHHHHHHH-----HcCCCcccEEEECChhHhhhhhhhhhh------hhHHHHHhc--cCCCeEEEEecc
Confidence 236777777777666544 357777789999999 78766543210 012345544 356677889999
Q ss_pred ccCC-CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHH
Q 016053 279 VSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 355 (396)
Q Consensus 279 l~~~-Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~ 355 (396)
+.+. ||++.+++|++++.+. +|++++++ |.++. ..+.+.+++++ +..++|+|+|.. .++.++|+
T Consensus 215 ~~~~~K~~~~li~a~~~l~~~-------~~~~~~i~-~~g~~--~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~ 281 (375)
T 3beo_A 215 RENLGEPMRNMFRAIKRLVDK-------HEDVQVVY-PVHMN--PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAA 281 (375)
T ss_dssp GGGTTHHHHHHHHHHHHHHHH-------CTTEEEEE-ECCSC--HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhh-------CCCeEEEE-eCCCC--HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHH
Confidence 9875 9999999999988652 37888655 65541 12334444442 333689998865 48999999
Q ss_pred HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC-CCC
Q 016053 356 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE-LHP 393 (396)
Q Consensus 356 ~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~-gG~ 393 (396)
+||++|+|| |.+++|||+||+|||+++. ||.
T Consensus 282 ~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~ 313 (375)
T 3beo_A 282 RSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTER 313 (375)
T ss_dssp TCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSC
T ss_pred hCcEEEECC-------CChHHHHHhcCCCEEEecCCCCC
Confidence 999999988 5679999999999999964 764
No 21
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.89 E-value=3.5e-22 Score=195.63 Aligned_cols=235 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred cCCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecc--------ccc--Cc------hh--------------hhc
Q 016053 149 LKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMR--------GHY--FK------LD--------------YVK 198 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~--------~~~--~~------~~--------------~~~ 198 (396)
..||++|+|....+.....++... + ..+.++++|... +.. +. .. .+.
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~-~--~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRR-I--DVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTT-C--SCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhC-C--CCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 458999999988777656555432 2 267999999862 211 00 00 011
Q ss_pred cccccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhH-HHHHhHHHHHHH--------cCCCCC
Q 016053 199 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV-AKRVLREHVRES--------LGVRNE 269 (396)
Q Consensus 199 ~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~-~~~~~~~~~r~~--------~g~~~~ 269 (396)
....++.++++|..+++.+.. .++.+.+. +||||||.+.|.+..... .+...|.++.+. ++++.+
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~----Ll~r~~d~--iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEH----LLKRKPDG--ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHH----HTSSCCSE--ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHhCCEEEECCHHHHHHHHH----HhcCCCCE--EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 124788888888888876554 33444443 399999999987742211 122334444332 245534
Q ss_pred -CEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc-------------------------
Q 016053 270 -DLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT------------------------- 322 (396)
Q Consensus 270 -~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~------------------------- 322 (396)
.++|..+||+. .+||+|.+++|+.++...++..+.+.+-+.|+|+..+..+-+
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 410 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG 410 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence 45565689999 689999999999999877765332334577888776532210
Q ss_pred -----------------------------------------------------------hHHHHHHHHHHhcCCCCc---
Q 016053 323 -----------------------------------------------------------KFESELRNYVMQKKIQDR--- 340 (396)
Q Consensus 323 -----------------------------------------------------------~~~~~l~~~~~~~~l~~~--- 340 (396)
+..+.+.+.++++++.++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d 490 (725)
T 3nb0_A 411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD 490 (725)
T ss_dssp HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence 011233444566676665
Q ss_pred ---EEEecC-c--------CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCCC
Q 016053 341 ---VHFVNK-T--------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 341 ---V~~~g~-~--------~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~~ 394 (396)
|+|++. . .++.++|+.||++|+||. +|+||++++||||||+|||+|+.||..
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~ 554 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFG 554 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHH
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChh
Confidence 677763 2 368999999999999999 999999999999999999999999853
No 22
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.89 E-value=5e-22 Score=188.74 Aligned_cols=278 Identities=12% Similarity=0.072 Sum_probs=170.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhhhhhhhhhhhhcceEE-EEcC------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAK------------ 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------ 140 (396)
|||++++... ........++++|+++| +++.++....... . ........++.. +...
T Consensus 1 mkIl~v~~~~---~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 1vgv_A 1 MKVLTVFGTR---PEAIKMAPLVHALAKDPFFEAKVCVTAQHRE--M----LDQVLKLFSIVPDYDLNIMQPGQGLTEIT 71 (384)
T ss_dssp CEEEEEECSH---HHHHHHHHHHHHHHHSTTCEEEEEECCSSGG--G----GHHHHHHHTCCCSEECCCCSTTSCHHHHH
T ss_pred CeEEEEeccc---HHHHHHHHHHHHHHhCCCCceEEEEcCCCHH--H----HHHHHHHcCCCCCcceecCCCCccHHHHH
Confidence 5899987432 11245678999999999 4888765432211 0 011111112211 1111
Q ss_pred -----chhhhhhccCCcEEEEcCc-hhhHHH-HHHHhcCCCccccceeeeeeeccccc----Cchhhhc-c-ccccccce
Q 016053 141 -----GQETINTALKADLIVLNTA-VAGKWL-DAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYVK-H-LPLVAGAM 207 (396)
Q Consensus 141 -----~~~~~~~~~~~DiV~~~~~-~~~~~~-~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~~-~-~~~~~~~~ 207 (396)
....+.+..+||+||+|+. ...... ..+...++ |++++.|+..... +.....+ + .+..+.++
T Consensus 72 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~i-----p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 146 (384)
T 1vgv_A 72 CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRI-----PVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHF 146 (384)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTC-----CEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCC-----CEEEEecccccccccCCCchHhhHHHHHhhccEEE
Confidence 1123334579999999975 322221 22333443 4666666542111 1111111 2 23477777
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcC-CCC-CCEEEEEEecccCC-C
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLG-VRN-EDLLFAIINSVSRG-K 283 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g-~~~-~~~~il~vG~l~~~-K 283 (396)
+.|....+.+. .+|++.+++.+++||+ |...+.+... ......+.++++++| +++ ++++++++||+.+. |
T Consensus 147 ~~s~~~~~~l~-----~~g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k 220 (384)
T 1vgv_A 147 SPTETSRQNLL-----RENVADSRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR 220 (384)
T ss_dssp ESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH
T ss_pred cCcHHHHHHHH-----HcCCChhhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeCCccccch
Confidence 77776665543 4577778899999995 4332221100 000011245788888 744 45678899999876 9
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEE
Q 016053 284 GQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVL 360 (396)
Q Consensus 284 g~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~ 360 (396)
|++.+++|++++.+. .++++|+++ |+++ .+.+.+++.+.. .++|+|+|.. +++.++|++||++
T Consensus 221 g~~~li~a~~~l~~~-------~~~~~l~i~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~ 286 (384)
T 1vgv_A 221 GFEEICHALADIATT-------HQDIQIVYPVHLNP----NVREPVNRILGH---VKNVILIDPQEYLPFVWLMNHAWLI 286 (384)
T ss_dssp HHHHHHHHHHHHHHH-------CTTEEEEEECCBCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHhh-------CCCeEEEEEcCCCH----HHHHHHHHHhhc---CCCEEEeCCCCHHHHHHHHHhCcEE
Confidence 999999999988653 378999886 4331 245666666432 3689997654 7899999999999
Q ss_pred EecCCCCCCCccHHHHHHHhcCCCEEEcCC-CCC
Q 016053 361 VQNSQAWGECFGRITIEAMAFQLPVLVLSE-LHP 393 (396)
Q Consensus 361 v~pS~~~~E~fg~~~lEAma~G~PVI~t~~-gG~ 393 (396)
|+||- .+++|||+||+|||+++. ||.
T Consensus 287 v~~Sg-------~~~lEA~a~G~PvI~~~~~~~~ 313 (384)
T 1vgv_A 287 LTDSG-------GIQEEAPSLGKPVLVMRDTTER 313 (384)
T ss_dssp EESSS-------TGGGTGGGGTCCEEEESSCCSC
T ss_pred EECCc-------chHHHHHHcCCCEEEccCCCCc
Confidence 99983 348999999999999987 664
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.88 E-value=1.2e-22 Score=175.22 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=116.7
Q ss_pred EecCCccchhh--hhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc-CCCCHHHHHHHHHHHH--HHHHhhccCCCCE
Q 016053 235 VHLGNSKELME--VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESL--ELIKEKKLEVPSV 309 (396)
Q Consensus 235 I~ngid~~~~~--~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~-~~Kg~~~li~a~~~l~--~~~~~~~~~~~~~ 309 (396)
||||+|.+.|. +... ...+.+..+|+++|+++ +++|+++|++. +.||++.++++++.+. + +++++
T Consensus 2 ipngvd~~~f~~~~~~~--~~~~~~~~~r~~~~~~~-~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~-------~~~~~ 71 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTG--SRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-------EFQEM 71 (200)
T ss_dssp ---CCCTTTSSGGGSCS--CHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-------GGGGE
T ss_pred CCCccChhhcccccccc--chhhHHHHHHHHcCCCC-CCEEEEeeccccccCCHHHHHHHHHHHHhhc-------cCCCe
Confidence 79999999987 5421 11223567899999964 45999999999 9999999999999874 3 23799
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEE-ecCcC--CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF-VNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~~~--~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
+|+|+|.+. +++.+.+++++++++ +|+| +|+++ ++..+|+.||++|+||. .|+||++++|||+||+|||
T Consensus 72 ~l~i~G~~~---~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 72 RFIIIGKGD---PELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp EEEEECCBC---HHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEE
T ss_pred EEEEECCCC---hHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEE
Confidence 999999874 236788899999886 8999 99985 89999999999999999 9999999999999999999
Q ss_pred EcCCCCC
Q 016053 387 VLSELHP 393 (396)
Q Consensus 387 ~t~~gG~ 393 (396)
+++.+|.
T Consensus 144 ~~~~~~~ 150 (200)
T 2bfw_A 144 ASAVGGL 150 (200)
T ss_dssp EESCHHH
T ss_pred EeCCCCh
Confidence 9998864
No 24
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.86 E-value=5.8e-21 Score=183.72 Aligned_cols=226 Identities=11% Similarity=0.038 Sum_probs=152.4
Q ss_pred CCcEEEEcCchhhHHHHHHHhcCCCccccceeeeeeeccccc-----Cc----hhhhccccccccceeeccccHHHHHHH
Q 016053 150 KADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHY-----FK----LDYVKHLPLVAGAMIDSHVTAEYWKNR 220 (396)
Q Consensus 150 ~~DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~-----~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~ 220 (396)
.-|+|++|+.........+.+. .|. .++.++.|...... ++ ....+.+..+|.+...+......+.+.
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~-~~~--~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~ 225 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQ-RPD--APILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLES 225 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHH-CTT--SCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhh-CCC--CeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence 4689999997655544444443 333 46888888753111 11 112233345666666665555554444
Q ss_pred HHhhh-cccC-------------CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 221 TRERL-RIKM-------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 221 ~~~~~-g~~~-------------~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
..... |.+. .++.++|+|||.+.|.+... ..+.++|++++ ++.+|+++||+.+.||++
T Consensus 226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~-----~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP-----QLPEGIEEWAD---GHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----C-----CCCTTHHHHHT---TSEEEEEEEESSGGGCHH
T ss_pred HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhH-----HHHHHHHHHhC---CceEEEEcccCccccCHH
Confidence 44333 3221 26789999999999875432 11256788886 578999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc----hHHHHHHHHHHhcC----CCCcEEEecCc--CCHHHHHHH
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT----KFESELRNYVMQKK----IQDRVHFVNKT--LTVAPYLAA 356 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~----~~~~~l~~~~~~~~----l~~~V~~~g~~--~~~~~~~~~ 356 (396)
.+++|+ ++.+..++. .++.|+++|....++. ++++++++++.+.+ .. .|+|+|.. +++..+|++
T Consensus 298 ~lL~Af-~ll~~~P~~----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~aly~~ 371 (496)
T 3t5t_A 298 RAVRAF-VLAARGGGL----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIACFRR 371 (496)
T ss_dssp HHHHHH-HHHHHTSSC----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHHHHH
T ss_pred HHHHHH-HHHHhCccc----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHHHHh
Confidence 999999 877643221 1467888885432222 23445555555442 22 69999975 789999999
Q ss_pred cCEEEecCCCCCCCccHHHHHHHhcC---CCEEEcCCCCCC
Q 016053 357 IDVLVQNSQAWGECFGRITIEAMAFQ---LPVLVLSELHPS 394 (396)
Q Consensus 357 aDv~v~pS~~~~E~fg~~~lEAma~G---~PVI~t~~gG~~ 394 (396)
||++|+||. .||||++++|||||| .|+|.|+.+|++
T Consensus 372 ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~ 410 (496)
T 3t5t_A 372 ADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAA 410 (496)
T ss_dssp CSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTH
T ss_pred ccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCH
Confidence 999999999 999999999999997 899999998864
No 25
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.85 E-value=2.5e-20 Score=176.47 Aligned_cols=255 Identities=9% Similarity=0.036 Sum_probs=163.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceE--E-EEcCc---hhhhhhcc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--V-ISAKG---QETINTAL 149 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~---~~~~~~~~ 149 (396)
+|.+.+ .+ .|..+.+..|+++|.++| +|.+.+...... . ...... .++. . ++... .+.+.+..
T Consensus 42 ~iwih~--~s-~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~--~----~~~~~~-~~v~~~~~~p~~~~~~l~~~l~~~ 110 (374)
T 2xci_A 42 ALWVHT--AS-IGEFNTFLPILKELKREH-RILLTYFSPRAR--E----YLKTKS-DFYDCLHPLPLDNPFSVKRFEELS 110 (374)
T ss_dssp CEEEEC--SS-HHHHHHHHHHHHHHHHHS-CEEEEESCGGGH--H----HHHTTG-GGCSEEEECCCSSHHHHHHHHHHH
T ss_pred CEEEEc--CC-HHHHHHHHHHHHHHHhcC-CEEEEEcCCcHH--H----HHHHhc-ccccceeECCCCCHHHHHHHHHHh
Confidence 455444 22 466789999999999998 887665432110 0 011111 1222 2 22221 23455668
Q ss_pred CCcEEEEcCc--hhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcc
Q 016053 150 KADLIVLNTA--VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRI 227 (396)
Q Consensus 150 ~~DiV~~~~~--~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~ 227 (396)
+||+||++.. ++. .+..+ . . | ++...+.... ...+...++.++.+++.|....+.+. .+|+
T Consensus 111 ~pDiv~~~~~~~~~~-~~~~~-~-~-p-----~~~~~~~~~~---~~~~~~~~~~~d~ii~~S~~~~~~l~-----~~g~ 173 (374)
T 2xci_A 111 KPKALIVVEREFWPS-LIIFT-K-V-P-----KILVNAYAKG---SLIEKILSKKFDLIIMRTQEDVEKFK-----TFGA 173 (374)
T ss_dssp CCSEEEEESCCCCHH-HHHHC-C-S-C-----EEEEEECCCC---CHHHHHHHTTCSEEEESCHHHHHHHH-----TTTC
T ss_pred CCCEEEEECccCcHH-HHHHH-h-C-C-----EEEEEeecCc---hHHHHHHHHhCCEEEECCHHHHHHHH-----HcCC
Confidence 8999997642 222 11111 1 1 2 3332222111 11233445678888888888776654 3466
Q ss_pred cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCC
Q 016053 228 KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 307 (396)
Q Consensus 228 ~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~ 307 (396)
+ ++.+++|+. |.....+ ++. + +.+++++.|+ ..||++.+++|++++.+ ++|
T Consensus 174 ~--ki~vi~n~~----f~~~~~~----------~~~--l--~~~vi~~~~~--~~k~~~~ll~A~~~l~~-------~~p 224 (374)
T 2xci_A 174 K--RVFSCGNLK----FICQKGK----------GIK--L--KGEFIVAGSI--HTGEVEIILKAFKEIKK-------TYS 224 (374)
T ss_dssp C--SEEECCCGG----GCCCCCS----------CCC--C--SSCEEEEEEE--CGGGHHHHHHHHHHHHT-------TCT
T ss_pred C--eEEEcCCCc----cCCCcCh----------hhh--h--cCCEEEEEeC--CCchHHHHHHHHHHHHh-------hCC
Confidence 5 799999973 2111100 001 1 1245666665 46899999999998864 458
Q ss_pred CEEEEEEecCCCccchHHHHHHHHHHhcCCC--------CcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHH
Q 016053 308 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--------DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 379 (396)
Q Consensus 308 ~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~--------~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAm 379 (396)
+++|+|+|+|+ +..++++++++++++. ++|.+.|..+|+..+|+.||++++||.. .|++|++++|||
T Consensus 225 ~~~lvivG~g~----~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~~~lEAm 299 (374)
T 2xci_A 225 SLKLILVPRHI----ENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGHNLLEPT 299 (374)
T ss_dssp TCEEEEEESSG----GGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCCCCHHHH
T ss_pred CcEEEEECCCH----HHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCcCHHHHH
Confidence 99999999875 2235788999998886 5788889889999999999998888762 578899999999
Q ss_pred hcCCCEEEc-CCCC
Q 016053 380 AFQLPVLVL-SELH 392 (396)
Q Consensus 380 a~G~PVI~t-~~gG 392 (396)
|||+|||++ +.+|
T Consensus 300 A~G~PVI~~~~~~~ 313 (374)
T 2xci_A 300 CWGIPVIYGPYTHK 313 (374)
T ss_dssp TTTCCEEECSCCTT
T ss_pred HhCCCEEECCCccC
Confidence 999999975 6665
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.84 E-value=8.3e-21 Score=179.89 Aligned_cols=268 Identities=15% Similarity=0.094 Sum_probs=159.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEE-EEcC------------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV-ISAK------------ 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------ 140 (396)
|||++++...+.. .....++++|++. ||+|.+++...... . ....+...++.. +...
T Consensus 6 mkIl~v~~~~~~~---~~~~~l~~~L~~~~g~~v~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (376)
T 1v4v_A 6 KRVVLAFGTRPEA---TKMAPVYLALRGIPGLKPLVLLTGQHRE--Q----LRQALSLFGIQEDRNLDVMQERQALPDLA 76 (376)
T ss_dssp EEEEEEECSHHHH---HHHHHHHHHHHTSTTEEEEEEECSSCHH--H----HHHHHHTTTCCCSEECCCCSSCCCHHHHH
T ss_pred eEEEEEEeccHHH---HHHHHHHHHHHhCCCCceEEEEcCCcHH--H----HHHHHHHcCCCcccccccCCCCccHHHHH
Confidence 6999998543212 2356789999998 89988776432210 0 111111222221 1111
Q ss_pred -----chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeecccccC-c---h-hhhcc-ccccccce
Q 016053 141 -----GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGHYF-K---L-DYVKH-LPLVAGAM 207 (396)
Q Consensus 141 -----~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~~~-~---~-~~~~~-~~~~~~~~ 207 (396)
....+.+..+||+||+|+.....+ ...+...++| +++..+....... . . ...++ ....+.++
T Consensus 77 ~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (376)
T 1v4v_A 77 ARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-----VGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDF 151 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-----EEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-----EEEEeCCCccccccCCCchHHHHHHHHHHhceee
Confidence 112333467999999987532222 2233444544 4433332211110 0 1 11111 22355666
Q ss_pred eeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHH
Q 016053 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 286 (396)
Q Consensus 208 ~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~ 286 (396)
+.+....+.+. ..|++++++.+++|+. |...+... +.++++++ +++.++++++||+...||++
T Consensus 152 ~~s~~~~~~l~-----~~g~~~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~--~~~~~vl~~~gr~~~~k~~~ 215 (376)
T 1v4v_A 152 APTPLAKANLL-----KEGKREEGILVTGQTGVDAVLLAAK---------LGRLPEGL--PEGPYVTVTMHRRENWPLLS 215 (376)
T ss_dssp ESSHHHHHHHH-----TTTCCGGGEEECCCHHHHHHHHHHH---------HCCCCTTC--CSSCEEEECCCCGGGGGGHH
T ss_pred CCCHHHHHHHH-----HcCCCcceEEEECCchHHHHhhhhh---------hhHHHHhc--CCCCEEEEEeCcccchHHHH
Confidence 66666555443 3477778899999875 32222110 11123333 24567788899998888999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEec
Q 016053 287 LFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 363 (396)
Q Consensus 287 ~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~p 363 (396)
.+++|++++.+. +++++++++ |++. ..++.+++++.. .++|+|+|.. .++.++|++||++|.|
T Consensus 216 ~ll~a~~~l~~~-------~~~~~lv~~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~ 281 (376)
T 1v4v_A 216 DLAQALKRVAEA-------FPHLTFVYPVHLNP----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTD 281 (376)
T ss_dssp HHHHHHHHHHHH-------CTTSEEEEECCSCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHHHhh-------CCCeEEEEECCCCH----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEEC
Confidence 999999988652 378898886 6542 245667666542 3689999543 3899999999999998
Q ss_pred CCCCCCCccHHHHHHHhcCCCEEEcC-CCCC
Q 016053 364 SQAWGECFGRITIEAMAFQLPVLVLS-ELHP 393 (396)
Q Consensus 364 S~~~~E~fg~~~lEAma~G~PVI~t~-~gG~ 393 (396)
|- |+ ++|||+||+|||+++ .+|.
T Consensus 282 S~------g~-~lEA~a~G~PvI~~~~~~~~ 305 (376)
T 1v4v_A 282 SG------GL-QEEGAALGVPVVVLRNVTER 305 (376)
T ss_dssp CH------HH-HHHHHHTTCCEEECSSSCSC
T ss_pred Cc------CH-HHHHHHcCCCEEeccCCCcc
Confidence 72 44 889999999999974 5653
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.82 E-value=1.4e-20 Score=159.16 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=99.8
Q ss_pred cCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHH--hcCCCCcE
Q 016053 264 LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM--QKKIQDRV 341 (396)
Q Consensus 264 ~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~--~~~l~~~V 341 (396)
+.+++++++|+|+|++.+.||++.+++|++.+ ++++|+|+|++. ..+.+++.++ +++++++|
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l-----------~~~~l~i~G~~~-----~~~~l~~~~~~~~~~l~~~v 80 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFS-----KGDHAERYARKIMKIAPDNV 80 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCC-----TTSTHHHHHHHHHHHSCTTE
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC-----------CCcEEEEEecCc-----cHHHHHHHHHhhhcccCCcE
Confidence 44567888999999999999999999999875 589999999986 3456777777 77888999
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+|+|++ +++.++|+.||++|+||. .|+||++++|||+||+|||+++.||.
T Consensus 81 ~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~ 132 (177)
T 2f9f_A 81 KFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGF 132 (177)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHH
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCH
Confidence 999998 459999999999999999 99999999999999999999998764
No 28
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.82 E-value=2.5e-20 Score=155.59 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=95.2
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 347 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~-- 347 (396)
+++|+|+|++.+.||++.+++|+..+. +.++++|+|+|+|+ ..+.++++++++++ +|+| |++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~--~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK--------YKQDIVLLLKGKGP-----DEKKIKLLAQKLGV--KAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT--------TGGGEEEEEECCST-----THHHHHHHHHHHTC--EEEC-CCCCH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc--------cCCCeEEEEEeCCc-----cHHHHHHHHHHcCC--eEEE-eecCH
Confidence 578999999999999999999999863 22799999999986 67889999999887 7899 986
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCC-CEEEc-CCCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLVL-SELHPS 394 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~-PVI~t-~~gG~~ 394 (396)
+++.++|+.||++|+||. .|+||++++|||+||+ |||++ +.||..
T Consensus 66 ~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~ 112 (166)
T 3qhp_A 66 NELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATR 112 (166)
T ss_dssp HHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGG
T ss_pred HHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchh
Confidence 789999999999999999 9999999999999997 99995 456543
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.73 E-value=2e-16 Score=150.65 Aligned_cols=283 Identities=12% Similarity=0.116 Sum_probs=162.2
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceE-EEEcC------
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-VISAK------ 140 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 140 (396)
...|+||||+++...-+ + -..+..++++|++. |+++.++....... . ..+.+...++. .+.+.
T Consensus 20 ~~~~~m~ki~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~---~---~~~~~~~~~i~~~~~l~~~~~~~ 90 (396)
T 3dzc_A 20 FQSNAMKKVLIVFGTRP--E-AIKMAPLVQQLCQDNRFVAKVCVTGQHRE---M---LDQVLELFSITPDFDLNIMEPGQ 90 (396)
T ss_dssp ----CCEEEEEEECSHH--H-HHHHHHHHHHHHHCTTEEEEEEECCSSSH---H---HHHHHHHTTCCCSEECCCCCTTC
T ss_pred HHhCCCCeEEEEEeccH--h-HHHHHHHHHHHHhCCCCcEEEEEecccHH---H---HHHHHHhcCCCCceeeecCCCCC
Confidence 34566789999984322 2 24568889999986 79987665433211 0 11111222321 01111
Q ss_pred -----------chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeeccccc----Cchhhhccc--c
Q 016053 141 -----------GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGHY----FKLDYVKHL--P 201 (396)
Q Consensus 141 -----------~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~~----~~~~~~~~~--~ 201 (396)
....+....+||+|++++.....+ ...+...++| ++...+....+. ++....+.+ +
T Consensus 91 ~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-----v~h~~ag~rs~~~~~~~~~~~~r~~~~~ 165 (396)
T 3dzc_A 91 TLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-----VGHVEAGLRTGNIYSPWPEEGNRKLTAA 165 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-----EEEETCCCCCSCTTSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-----EEEEECCccccccccCCcHHHHHHHHHH
Confidence 012334568999999987543322 2344555655 332222221111 112222222 3
Q ss_pred ccccceeeccccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcC-CCCCC-EEEEEEec
Q 016053 202 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLG-VRNED-LLFAIINS 278 (396)
Q Consensus 202 ~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g-~~~~~-~~il~vG~ 278 (396)
..+.+++.+....+.+. ..|++++++.+++|+. |...+.+.. .......++++++++| +++++ +++++.+|
T Consensus 166 ~a~~~~~~se~~~~~l~-----~~G~~~~ki~vvGn~~~d~~~~~~~~-~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 166 LTQYHFAPTDTSRANLL-----QENYNAENIFVTGNTVIDALLAVREK-IHTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp TCSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHHHH-HHHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred hcCEEECCCHHHHHHHH-----HcCCCcCcEEEECCcHHHHHHHhhhh-cccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 44555566655555443 4588888899999854 432221110 0000111467889999 45444 44445555
Q ss_pred cc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHH
Q 016053 279 VS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 354 (396)
Q Consensus 279 l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~ 354 (396)
.. ..|+++.+++|++++.+ ++|++++++. |+++ ..++.+++.. +..++|+++++. .++..+|
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~-------~~~~~~~v~~~g~~~----~~~~~l~~~~---~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAE-------QHPECQILYPVHLNP----NVREPVNKLL---KGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHHT---TTCTTEEEECCCCHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHH-------hCCCceEEEEeCCCh----HHHHHHHHHH---cCCCCEEEeCCCCHHHHHHHH
Confidence 43 35889999999998865 2378999886 5432 2344444432 444689998876 5789999
Q ss_pred HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc-CCCC
Q 016053 355 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL-SELH 392 (396)
Q Consensus 355 ~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t-~~gG 392 (396)
++||++|.+| | |+. +|||++|+|||++ +.++
T Consensus 306 ~~ad~vv~~S-----G-g~~-~EA~a~G~PvV~~~~~~~ 337 (396)
T 3dzc_A 306 DRAHIILTDS-----G-GIQ-EEAPSLGKPVLVMRETTE 337 (396)
T ss_dssp HHCSEEEESC-----S-GGG-TTGGGGTCCEEECCSSCS
T ss_pred HhcCEEEECC-----c-cHH-HHHHHcCCCEEEccCCCc
Confidence 9999999876 2 443 8999999999998 5555
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.67 E-value=5.4e-15 Score=139.26 Aligned_cols=255 Identities=13% Similarity=0.051 Sum_probs=147.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc------------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG------------ 141 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 141 (396)
++||++... ..||.-.-...++++|+++||+|.+++....-+ .+.+...|+++..+..
T Consensus 2 ~~~i~i~~G--GTgGHi~palala~~L~~~g~~V~~vg~~~g~e--------~~~v~~~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 2 KGNVLIMAG--GTGGHVFPALACAREFQARGYAVHWLGTPRGIE--------NDLVPKAGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp -CEEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH--------HHHTGGGTCCEEECC-------------
T ss_pred CCcEEEEcC--CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh--------hchhhhcCCcEEEEECCCcCCCCHHHHH
Confidence 468887762 224444667889999999999999998554311 1112222333322110
Q ss_pred ------------hhhhhhccCCcEEEEcCchh-hHHHHHHHhcCCCccccceeeeeeecccccCchhhhcccccccccee
Q 016053 142 ------------QETINTALKADLIVLNTAVA-GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMI 208 (396)
Q Consensus 142 ------------~~~~~~~~~~DiV~~~~~~~-~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
...+.+..+||+|+++.... ......+...++| ++ +|+.. .......+++......++
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-----~v--ihe~n--~~~G~~nr~l~~~a~~v~ 142 (365)
T 3s2u_A 72 KAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-----LV--IHEQN--AVAGTANRSLAPIARRVC 142 (365)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-----EE--EEECS--SSCCHHHHHHGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-----EE--EEecc--hhhhhHHHhhccccceee
Confidence 12334568999999987543 3333445556655 33 56642 222222223222222222
Q ss_pred eccccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEE-EecccCCCCHHH
Q 016053 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI-INSVSRGKGQDL 287 (396)
Q Consensus 209 ~s~~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~-vG~l~~~Kg~~~ 287 (396)
.+... .+ ...++..++.|++..+.+... +.+.+++++++.++. .|+....+.-+.
T Consensus 143 ~~~~~----------~~-~~~~k~~~~g~pvr~~~~~~~-------------~~~~~~~~~~~~ilv~gGs~g~~~~~~~ 198 (365)
T 3s2u_A 143 EAFPD----------TF-PASDKRLTTGNPVRGELFLDA-------------HARAPLTGRRVNLLVLGGSLGAEPLNKL 198 (365)
T ss_dssp ESSTT----------SS-CC---CEECCCCCCGGGCCCT-------------TSSCCCTTSCCEEEECCTTTTCSHHHHH
T ss_pred ecccc----------cc-cCcCcEEEECCCCchhhccch-------------hhhcccCCCCcEEEEECCcCCccccchh
Confidence 22110 11 133557777888876665322 233455555555544 467777777778
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCC
Q 016053 288 FLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 366 (396)
Q Consensus 288 li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~ 366 (396)
+.++++.+.. ..++.+++ +|.+ +.+.+.+..++.+ .++.+.++.+|+.++|++||++|.-+
T Consensus 199 ~~~al~~l~~--------~~~~~vi~~~G~~------~~~~~~~~~~~~~--~~~~v~~f~~dm~~~l~~aDlvI~ra-- 260 (365)
T 3s2u_A 199 LPEALAQVPL--------EIRPAIRHQAGRQ------HAEITAERYRTVA--VEADVAPFISDMAAAYAWADLVICRA-- 260 (365)
T ss_dssp HHHHHHTSCT--------TTCCEEEEECCTT------THHHHHHHHHHTT--CCCEEESCCSCHHHHHHHCSEEEECC--
T ss_pred hHHHHHhccc--------ccceEEEEecCcc------ccccccceecccc--cccccccchhhhhhhhccceEEEecC--
Confidence 8888776532 13445444 4443 4456666666665 45788999999999999999999422
Q ss_pred CCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 367 WGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 367 ~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
-++++.|+|++|+|+|..+.+++
T Consensus 261 ----G~~Tv~E~~a~G~P~Ilip~p~~ 283 (365)
T 3s2u_A 261 ----GALTVSELTAAGLPAFLVPLPHA 283 (365)
T ss_dssp ----CHHHHHHHHHHTCCEEECC----
T ss_pred ----CcchHHHHHHhCCCeEEeccCCC
Confidence 27899999999999998876643
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.66 E-value=2.5e-15 Score=143.33 Aligned_cols=274 Identities=12% Similarity=0.103 Sum_probs=155.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceE---EEEc----C-
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ---VISA----K- 140 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~- 140 (396)
.|++|||+++...-+ + -..+..+.++|++. |+++.++......+ . ..+.+...++. -+.. .
T Consensus 24 ~m~~~kI~~v~Gtr~--~-~~~~a~li~~l~~~~~~~~~~~~~tG~h~~--m----~~~~~~~~~i~~~~~l~v~~~~~~ 94 (403)
T 3ot5_A 24 AMAKIKVMSIFGTRP--E-AIKMAPLVLALEKEPETFESTVVITAQHRE--M----LDQVLEIFDIKPDIDLDIMKKGQT 94 (403)
T ss_dssp --CCEEEEEEECSHH--H-HHHHHHHHHHHHTCTTTEEEEEEECC-----------CHHHHHHTTCCCSEECCCCC-CCC
T ss_pred ccccceEEEEEecCh--h-HHHHHHHHHHHHhCCCCCcEEEEEecCcHH--H----HHHHHHhcCCCCCcccccCCCCCC
Confidence 466679999984322 2 14558899999987 68987665332211 0 11112222221 0111 0
Q ss_pred ----------chhhhhhccCCcEEEEcCchhhHH--HHHHHhcCCCccccceeeeeeecccc-c---Cchhhh-cccc-c
Q 016053 141 ----------GQETINTALKADLIVLNTAVAGKW--LDAVLKEDVPRVLPNVLWWIHEMRGH-Y---FKLDYV-KHLP-L 202 (396)
Q Consensus 141 ----------~~~~~~~~~~~DiV~~~~~~~~~~--~~~~~~~~~~~~~~~vv~~~h~~~~~-~---~~~~~~-~~~~-~ 202 (396)
....+.+..+||+|++++.....+ ...+...++| ++........+ . ++.... .+.. .
T Consensus 95 ~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-----v~h~~aglrs~~~~~~~p~~~~r~~~~~~ 169 (403)
T 3ot5_A 95 LAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-----LGHVEAGLRTWNKYSPFPEEMNRQLTGVM 169 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-----EEEESCCCCCSCTTSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-----EEEEECCccccccccCCcHHHHHHHHHHh
Confidence 012334568999999987532222 2344555654 33222211111 1 111111 2222 2
Q ss_pred cccceeeccccHHHHHHHHHhhhcccCCCEEEEecC-CccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccC
Q 016053 203 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 281 (396)
Q Consensus 203 ~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ng-id~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~ 281 (396)
.+.+++.+....+.+. ..|++++++.+++|+ +|...+..... .+.+.++++ ++++++++..||...
T Consensus 170 a~~~~~~se~~~~~l~-----~~Gi~~~~i~vvGn~~~D~~~~~~~~~------~~~~~~~~l--~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 170 ADIHFSPTKQAKENLL-----AEGKDPATIFVTGNTAIDALKTTVQKD------YHHPILENL--GDNRLILMTAHRREN 236 (403)
T ss_dssp CSEEEESSHHHHHHHH-----HTTCCGGGEEECCCHHHHHHHHHSCTT------CCCHHHHSC--TTCEEEEECCCCHHH
T ss_pred cCEEECCCHHHHHHHH-----HcCCCcccEEEeCCchHHHHHhhhhhh------cchHHHHhc--cCCCEEEEEeCcccc
Confidence 3445555555554444 458888899999885 45433321110 012344555 445566666777543
Q ss_pred -CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHc
Q 016053 282 -GKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI 357 (396)
Q Consensus 282 -~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~a 357 (396)
.|+++.+++|+.++.+. ++++++++. |+++ ..++.+++. ++..++|+++++. .++..+|++|
T Consensus 237 ~~~~l~~ll~a~~~l~~~-------~~~~~~v~~~~~~~----~~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~a 302 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVES-------REDTELVYPMHLNP----AVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKS 302 (403)
T ss_dssp HTTHHHHHHHHHHHHHHH-------CTTEEEEEECCSCH----HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHE
T ss_pred cCcHHHHHHHHHHHHHHh-------CCCceEEEecCCCH----HHHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhc
Confidence 57899999999988653 378999987 4331 133344433 2344689999987 4899999999
Q ss_pred CEEEecCCCCCCCccHHHHHHHhcCCCEEEc-CCCC
Q 016053 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLVL-SELH 392 (396)
Q Consensus 358 Dv~v~pS~~~~E~fg~~~lEAma~G~PVI~t-~~gG 392 (396)
|++|.+|- ...+|||++|+|+|++ +.++
T Consensus 303 d~vv~~SG-------g~~~EA~a~g~PvV~~~~~~~ 331 (403)
T 3ot5_A 303 YLVFTDSG-------GVQEEAPGMGVPVLVLRDTTE 331 (403)
T ss_dssp EEEEECCH-------HHHHHGGGTTCCEEECCSSCS
T ss_pred CEEEECCc-------cHHHHHHHhCCCEEEecCCCc
Confidence 99997662 3448999999999998 5554
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.60 E-value=2.2e-14 Score=137.23 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=73.4
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++..++++.|++. .++.+.+.++++.+.+ .++++++++++.. ..+.++ ++.++|.+.|+.
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~----~~~~l~------~~~~~v~~~~~~ 300 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---------LDADVLVASGPSL----DVSGLG------EVPANVRLESWV 300 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHT---------SSSEEEEECCSSC----CCTTCC------CCCTTEEEESCC
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHc---------CCCEEEEEECCCC----Chhhhc------cCCCcEEEeCCC
Confidence 4567778889986 7788887777776643 3677777766542 111111 345799999999
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
++.++|+.||++|.+|- +.+++|||++|+|+|+++.++
T Consensus 301 -~~~~~l~~ad~~v~~~g------~~t~~Ea~a~G~P~v~~p~~~ 338 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHGG------SGTTLGALGAGVPQLSFPWAG 338 (412)
T ss_dssp -CHHHHGGGCSEEEESCC------HHHHHHHHHHTCCEEECCCST
T ss_pred -CHHHHHhcCcEEEECCc------hHHHHHHHHhCCCEEecCCch
Confidence 89999999999996554 488999999999999987764
No 33
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.56 E-value=3.9e-14 Score=131.32 Aligned_cols=237 Identities=11% Similarity=-0.009 Sum_probs=146.3
Q ss_pred CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEEEcCchh-hH-
Q 016053 86 LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVA-GK- 163 (396)
Q Consensus 86 ~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~~~~~~~-~~- 163 (396)
..++.+.-....+-+.+.|++..-+...... ......+...+. ..+....++|+|+.++|.. +.
T Consensus 24 ~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~--~~~~~~~~~~~~------------~~~~~~~~~DvIi~q~P~~~~~~ 89 (339)
T 3rhz_A 24 QSTAQLCQNTVTDVAVSLGYRELGIYCYQIH--TDSESELSKRLD------------GIVAGLRHGDVVIFQTPTWNTTE 89 (339)
T ss_dssp TCHHHHHHHHHHHHHHHTTCEEEEEECCCGG--GSCHHHHHHHHH------------HHTTTCCTTCEEEEEECCSSCHH
T ss_pred cchHHHHHHHHHHHHHHCCCeEEEeeccccc--cccHHHHHHHHH------------HHHhcCCCCCEEEEeCCCcchhh
Confidence 3566788888888888899987766521110 000001111111 1233457899999988753 11
Q ss_pred HHH-HHHhcCCCccccceeeeeeecccccCchh------hhccccccccceeeccccHHHHHHHHHhhhcccCCCEEEEe
Q 016053 164 WLD-AVLKEDVPRVLPNVLWWIHEMRGHYFKLD------YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVH 236 (396)
Q Consensus 164 ~~~-~~~~~~~~~~~~~vv~~~h~~~~~~~~~~------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k~~vI~ 236 (396)
+.. .+...+ ....++++.+|+..+..+... ....++.+|.+++.|..+.+.+.+ .|++..++.+++
T Consensus 90 ~~~~~~~~lk--~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~-----~G~~~~ki~~~~ 162 (339)
T 3rhz_A 90 FDEKLMNKLK--LYDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDKLRD-----FGMNVSKTVVQG 162 (339)
T ss_dssp HHHHHHHHHT--TSSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHHHHH-----TTCCCSEEEECC
T ss_pred HHHHHHHHHH--hcCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHHHHH-----cCCCcCceeecC
Confidence 111 111111 113679999999753322211 234567899999999988877653 477666664443
Q ss_pred cCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEec
Q 016053 237 LGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 316 (396)
Q Consensus 237 ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~ 316 (396)
+. |... ..+ ...+.+++.|+|+|++.....+..+ .++++|+|+|+
T Consensus 163 ~~-~~~~--~~~---------------~~~~~~~~~i~yaG~l~k~~~L~~l-----------------~~~~~f~ivG~ 207 (339)
T 3rhz_A 163 MW-DHPT--QAP---------------MFPAGLKREIHFPGNPERFSFVKEW-----------------KYDIPLKVYTW 207 (339)
T ss_dssp SC-CCCC--CCC---------------CCCCEEEEEEEECSCTTTCGGGGGC-----------------CCSSCEEEEES
T ss_pred CC-CccC--ccc---------------ccccCCCcEEEEeCCcchhhHHHhC-----------------CCCCeEEEEeC
Confidence 32 2110 000 0122456899999999853322211 16899999999
Q ss_pred CCCccchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEEEecCCC-C----CCCccHHHHHHHhcCCCEEEcC
Q 016053 317 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQA-W----GECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 317 g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~-~----~E~fg~~~lEAma~G~PVI~t~ 389 (396)
|+. + .++ +|+|+|++ +++..+++++|+.+..... + ...+|.+++||||||+|||+++
T Consensus 208 G~~-----~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~ 271 (339)
T 3rhz_A 208 QNV-----E----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE 271 (339)
T ss_dssp CCC-----C----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred Ccc-----c----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence 972 1 244 89999986 7899999999988875220 0 1356899999999999999999
Q ss_pred CCCCC
Q 016053 390 ELHPS 394 (396)
Q Consensus 390 ~gG~~ 394 (396)
.++.+
T Consensus 272 ~~~~~ 276 (339)
T 3rhz_A 272 GIANQ 276 (339)
T ss_dssp TCTTT
T ss_pred ChhHH
Confidence 88764
No 34
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.51 E-value=2.2e-14 Score=136.69 Aligned_cols=94 Identities=13% Similarity=0.127 Sum_probs=61.6
Q ss_pred CCCEEEEEEecccCCC----------CHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCC
Q 016053 268 NEDLLFAIINSVSRGK----------GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 337 (396)
Q Consensus 268 ~~~~~il~vG~l~~~K----------g~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l 337 (396)
++..+++++|++...| .++.+++++++ .+++++++|++. ..+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~~~~-----~~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK------------LGFEVVVAVSDK-----LAQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGG------------GTCEEEECCCC-------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHh------------CCCEEEEEeCCc-----chhhhc------cC
Confidence 4567888889997554 45555555543 368889988764 223322 34
Q ss_pred CCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 338 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 338 ~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+++|++.|+. ++.+++..||++|. ++.+.+++|||++|+|+|+...+
T Consensus 283 ~~~v~~~~~~-~~~~ll~~ad~~v~------~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 283 PEGVLAAGQF-PLSAIMPACDVVVH------HGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp CTTEEEESCC-CHHHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCcEEEeCcC-CHHHHHhhCCEEEe------cCCHHHHHHHHHhCCCEEecCCc
Confidence 5899999998 68999999999994 44478899999999999997654
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.50 E-value=2.8e-13 Score=130.36 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=66.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEE-EEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l-~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++.++++++|++. .++.+.+.++++.+.+ .+++++ +++|++.. .+.+ + .++++|.++|+
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~--------~~~~~~~~~~G~~~~-----~~~l----~--~~~~~v~~~~~ 290 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN--------LPGWHLVLQIGRKVT-----PAEL----G--ELPDNVEVHDW 290 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT--------CTTEEEEEECC---C-----GGGG----C--SCCTTEEEESS
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc--------CCCeEEEEEeCCCCC-----hHHh----c--cCCCCeEEEec
Confidence 3457888899987 5555555544444321 147887 56787641 1222 1 24578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++. ++|++||++|..+- +++++|||++|+|+|+++.+|
T Consensus 291 ~~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 291 VPQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp CCHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCSH
T ss_pred CCHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCcc
Confidence 8777 89999999997543 378999999999999998754
No 36
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.47 E-value=6.8e-13 Score=126.41 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=69.9
Q ss_pred CCCEEEEEEecccCC-CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..+++++|++... ++.+.+.++++.+.+ .+++++++|++.. .+.+. +++++|.+.|+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~g~~~-----~~~l~------~~~~~v~~~~~ 290 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGE---------VDADFVLALGDLD-----ISPLG------TLPRNVRAVGW 290 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHT---------SSSEEEEECTTSC-----CGGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHc---------CCCEEEEEECCcC-----hhhhc------cCCCcEEEEcc
Confidence 456778888998654 355555555555432 4789999987752 11111 35689999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
. ++.+++..||++|. .+.+.+++|||++|+|+|+...
T Consensus 291 ~-~~~~ll~~ad~~v~------~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 291 T-PLHTLLRTCTAVVH------HGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC
T ss_pred C-CHHHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEcCC
Confidence 9 89999999999994 3446789999999999999544
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.46 E-value=4.4e-13 Score=127.32 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=70.9
Q ss_pred CCCEEEEEEecccCCCCH-HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQ-DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~-~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+....|+. ..+++++.+. + +.|+++++++|++. ..+.+. +++++|++.|+
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~-------~~p~~~~v~~~~~~-----~~~~l~------~~~~~v~~~~~ 277 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-T-------ELPGVEAVIAVPPE-----HRALLT------DLPDNARIAES 277 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-H-------TSTTEEEEEECCGG-----GGGGCT------TCCTTEEECCS
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-c-------cCCCeEEEEEECCc-----chhhcc------cCCCCEEEecc
Confidence 345666777998765555 7777777665 4 33789999998764 222221 34579999998
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
. +..+++..||++|. ++.+.+++|||++|+|+|+....
T Consensus 278 ~-~~~~ll~~ad~~v~------~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 278 V-PLNLFLRTCELVIC------AGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp C-CGGGTGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred C-CHHHHHhhCCEEEe------CCCHHHHHHHHHhCCCEEecCCc
Confidence 7 45677899999994 44467899999999999997653
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.45 E-value=1.6e-12 Score=123.78 Aligned_cols=95 Identities=15% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+....+. +.+.++++.+. + .++++++ +|++. ..+.++ .++++|++.|+
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~----~-----~~~~~~~~~g~~~-----~~~~~~------~~~~~v~~~~~ 288 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFA----D-----TPWHVVMAIGGFL-----DPAVLG------PLPPNVEAHQW 288 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHT----T-----SSCEEEEECCTTS-----CGGGGC------SCCTTEEEESC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHh----c-----CCcEEEEEeCCcC-----ChhhhC------CCCCcEEEecC
Confidence 45677888899876652 22322222221 1 2466665 55543 111111 24579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.++. ++++.||++|..+- ..+++|||++|+|+|+...
T Consensus 289 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 289 IPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp CCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECGG
T ss_pred CCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeCC
Confidence 9777 99999999996544 4788999999999997654
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.39 E-value=1.8e-11 Score=115.70 Aligned_cols=268 Identities=12% Similarity=0.070 Sum_probs=152.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhh-hhhcceE--EEEcC-----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHK-MWDRGVQ--VISAK----------- 140 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~----------- 140 (396)
.|++++...-+-- ..+.-+.++|++. +++.++...... +.. +.+. +...+++ .+.+.
T Consensus 10 ~~~~~v~GtRpe~---~k~~p~~~~l~~~-~~~~~~~tgqh~-~~~----~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 80 (385)
T 4hwg_A 10 LKVMTIVGTRPEL---IKLCCVISEFDKH-TKHILVHTGQNY-AYE----LNQVFFDDMGIRKPDYFLEVAADNTAKSIG 80 (385)
T ss_dssp CEEEEEECSHHHH---HHHHHHHHHHHHH-SEEEEEECSCHH-HHH----HTHHHHC-CCCCCCSEECCCCCCCSHHHHH
T ss_pred hheeEEEEcCHhH---HHHHHHHHHHHhc-CCEEEEEeCCCC-Chh----HHHHHHhhCCCCCCceecCCCCCCHHHHHH
Confidence 4788887321111 4677778888877 888877644321 101 2221 1112221 01111
Q ss_pred ----chhhhhhccCCcEEEEcCchhh-HHHHHHHhcCCCccccceeeeeeecccc--cCchhhhc-ccc-ccccceeecc
Q 016053 141 ----GQETINTALKADLIVLNTAVAG-KWLDAVLKEDVPRVLPNVLWWIHEMRGH--YFKLDYVK-HLP-LVAGAMIDSH 211 (396)
Q Consensus 141 ----~~~~~~~~~~~DiV~~~~~~~~-~~~~~~~~~~~~~~~~~vv~~~h~~~~~--~~~~~~~~-~~~-~~~~~~~~s~ 211 (396)
....+.+..+||+|++++.... .....+.+.++| ++......+.. .++....+ ... ..+..++.+.
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-----v~h~eaglrs~~~~~pee~nR~~~~~~a~~~~~~te 155 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-----IFHMEAGNRCFDQRVPEEINRKIIDHISDVNITLTE 155 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-----EEEESCCCCCSCTTSTHHHHHHHHHHHCSEEEESSH
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-----EEEEeCCCccccccCcHHHHHHHHHhhhceeecCCH
Confidence 1123445689999999873221 113455666765 33222222111 11111112 222 2333444555
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCC-ccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc---CCCCHHH
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS---RGKGQDL 287 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngi-d~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~---~~Kg~~~ 287 (396)
...+.+. +.|++++++.++.|.. |.-.+.. ...+++++++++|+++++++++..+|.. ..|++..
T Consensus 156 ~~~~~l~-----~~G~~~~~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ 224 (385)
T 4hwg_A 156 HARRYLI-----AEGLPAELTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKE 224 (385)
T ss_dssp HHHHHHH-----HTTCCGGGEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHH
T ss_pred HHHHHHH-----HcCCCcCcEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHH
Confidence 4444433 4588888899998753 4322211 0123566889999987777777777643 3478999
Q ss_pred HHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhc-C-C--CCcEEEecCc--CCHHHHHHHcCEEE
Q 016053 288 FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-K-I--QDRVHFVNKT--LTVAPYLAAIDVLV 361 (396)
Q Consensus 288 li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~-~-l--~~~V~~~g~~--~~~~~~~~~aDv~v 361 (396)
+++|+.++.+. + ++.+++... +.+++.+++. + + .++|++++.. .++..+++.||+++
T Consensus 225 ll~al~~l~~~-------~-~~~vv~p~~---------p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv 287 (385)
T 4hwg_A 225 LLNSLQMLIKE-------Y-NFLIIFSTH---------PRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL 287 (385)
T ss_dssp HHHHHHHHHHH-------H-CCEEEEEEC---------HHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHhc-------C-CeEEEEECC---------hHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence 99999987642 1 566666543 1234444443 3 2 3689998775 47899999999999
Q ss_pred ecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 362 QNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 362 ~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.+| |.+..||+++|+|+|+.+..
T Consensus 288 t~S-------Ggv~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 288 SDS-------GTITEEASILNLPALNIREA 310 (385)
T ss_dssp ECC-------TTHHHHHHHTTCCEEECSSS
T ss_pred ECC-------ccHHHHHHHcCCCEEEcCCC
Confidence 554 34579999999999997653
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.36 E-value=3.1e-11 Score=115.38 Aligned_cols=95 Identities=15% Similarity=0.198 Sum_probs=61.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+...++++.|+.....+ +.+...++.+ .+ .++++++ +|++. ..+.++ .++++|.+.++
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al----~~-----~~~~~v~~~g~~~-----~~~~l~------~~~~~v~~~~~ 304 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAF----DG-----QPWHVVMTLGGQV-----DPAALG------DLPPNVEAHRW 304 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHH----TT-----SSCEEEEECTTTS-----CGGGGC------CCCTTEEEESC
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHH----hc-----CCcEEEEEeCCCC-----ChHHhc------CCCCcEEEEec
Confidence 45677888898755432 2222222222 11 2477777 56543 111111 34579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.++. +++..||++|..+- ..+++|||++|+|+|+...
T Consensus 305 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 305 VPHV-KVLEQATVCVTHGG------MGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp CCHH-HHHHHEEEEEESCC------HHHHHHHHHTTCCEEECCC
T ss_pred CCHH-HHHhhCCEEEECCc------HHHHHHHHHhCCCEEEeCC
Confidence 8766 99999999996443 4688999999999999654
No 41
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.27 E-value=2.5e-10 Score=107.90 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCCEEEEEEecccCC-------CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCc
Q 016053 268 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 340 (396)
Q Consensus 268 ~~~~~il~vG~l~~~-------Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~ 340 (396)
++..+++++|++... +.++.+++++++ .++++++++++. ..+.+++ ++++
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~-----~~~~l~~------~~~~ 265 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAPDT-----VAEALRA------EVPQ 265 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECCHH-----HHHHHHH------HCTT
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeCCC-----CHHhhCC------CCCc
Confidence 346788889998875 567777777754 367888876532 2333331 3468
Q ss_pred EEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 341 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 341 V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|.+ |+. +..++|.+||++|..+- +++++|||++|+|+|+.+..
T Consensus 266 v~~-~~~-~~~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 266 ARV-GWT-PLDVVAPTCDLLVHHAG------GVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp SEE-ECC-CHHHHGGGCSEEEECSC------TTHHHHHHHTTCCEEECCCS
T ss_pred eEE-cCC-CHHHHHhhCCEEEeCCc------HHHHHHHHHhCCCEEEccCc
Confidence 999 987 57889999999996443 47899999999999998764
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.18 E-value=3.5e-09 Score=103.71 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=86.3
Q ss_pred HHHcCCCCC--CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEE--EEecCCCccchHHHHHHHHHHhcC
Q 016053 261 RESLGVRNE--DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV--IIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 261 r~~~g~~~~--~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~--ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
|..++++++ .++++++++ ..|..+.+++++.++.++. |+..+. ++|++. .....+.+.+.+.|
T Consensus 430 r~~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~v-------P~s~L~l~~~g~~~----g~~~~~~~~~~~~G 496 (631)
T 3q3e_A 430 KVDYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRA-------KVKVHFHFALGQSN----GITHPYVERFIKSY 496 (631)
T ss_dssp SCCCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHC-------SSEEEEEEEESSCC----GGGHHHHHHHHHHH
T ss_pred cccccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhC-------CCcEEEEEecCCCc----hhhHHHHHHHHHcC
Confidence 445677664 567777776 5799999999999988744 676654 366432 12233334456678
Q ss_pred CCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 337 IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 337 l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+.+++.|.|.. ++....|+.+|+++.|+. +. .|++.+|||+||+|||+....
T Consensus 497 I~~Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y~-GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 497 LGDSATAHPHSPYHQYLRILHNCDMMVNPFP--FG-NTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HGGGEEEECCCCHHHHHHHHHTCSEEECCSS--SC-CSHHHHHHHHTTCCEEEECCS
T ss_pred CCccEEEcCCCCHHHHHHHHhcCcEEEeCCc--cc-CChHHHHHHHcCCCEEeccCC
Confidence 88899999986 567788999999999987 54 499999999999999996644
No 43
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.09 E-value=2.2e-09 Score=102.35 Aligned_cols=94 Identities=9% Similarity=0.045 Sum_probs=68.0
Q ss_pred CCCEEEEEEeccc-CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~-~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
.+..+++..|++. ..+.++.++++++. .++++++.++....+ ..+..++|.+.++
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~------------~~~~vv~~~g~~~~~------------~~~~~~~v~~~~~ 275 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRA------------QGRRVVLSSGWAGLG------------RIDEGDDCLVVGE 275 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHH------------TTCCEEEECTTTTCC------------CSSCCTTEEEESS
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHh------------CCCEEEEEeCCcccc------------cccCCCCEEEecC
Confidence 4566778889987 66667777777765 356777765432110 1234579999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.+ ..+++..||++|..+ -..++.||+++|+|+|+....|
T Consensus 276 ~~-~~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~ 314 (404)
T 3h4t_A 276 VN-HQVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKA 314 (404)
T ss_dssp CC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCST
T ss_pred CC-HHHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcc
Confidence 74 488999999999533 3478899999999999987654
No 44
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.01 E-value=2.4e-08 Score=95.65 Aligned_cols=96 Identities=14% Similarity=0.198 Sum_probs=64.1
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEE-EEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~-ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..++++.|+.. .+..+.+.++++.+.+ .+++++ ++|.+.. .+.+ . .++++|.+.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~---------~~~~~~~~~g~~~~-----~~~~----~--~~~~~v~~~~~ 312 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG---------LDWHVVLSVGRFVD-----PADL----G--EVPPNVEVHQW 312 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT---------CSSEEEEECCTTSC-----GGGG----C--SCCTTEEEESS
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc---------CCcEEEEEECCcCC-----hHHh----c--cCCCCeEEecC
Confidence 3457778889886 3443444333333321 467774 4676531 1111 1 24578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..+. ++|+.||++|.. +-.++++|||++|+|+|+....
T Consensus 313 ~~~~-~~l~~~d~~v~~------~G~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 313 VPQL-DILTKASAFITH------AGMGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp CCHH-HHHTTCSEEEEC------CCHHHHHHHHHTTCCEEECCCS
T ss_pred CCHH-HHHhhCCEEEEC------CchhHHHHHHHcCCCEEEecCc
Confidence 8776 899999999853 2348999999999999998764
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.99 E-value=6.2e-10 Score=107.37 Aligned_cols=93 Identities=13% Similarity=0.029 Sum_probs=66.1
Q ss_pred CCEEEEEEecccC-----CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEE
Q 016053 269 EDLLFAIINSVSR-----GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 343 (396)
Q Consensus 269 ~~~~il~vG~l~~-----~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~ 343 (396)
...++++.|++.. .|.+..++++++. .++++++++++. ..+.+ . +++++|.+
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~-----~~~~l----~--~~~~~v~~ 323 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFDAQ-----QLEGV----A--NIPDNVRT 323 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCCTT-----TTSSC----S--SCCSSEEE
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEECCc-----chhhh----c--cCCCCEEE
Confidence 4568888999875 4888888888864 367888877653 11111 1 34679999
Q ss_pred ecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 344 VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 344 ~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++.++ .++|.+||++|. .+.+.++.|||++|+|+|+....
T Consensus 324 ~~~~~~-~~ll~~ad~~V~------~~G~~t~~Ea~~~G~P~i~~p~~ 364 (441)
T 2yjn_A 324 VGFVPM-HALLPTCAATVH------HGGPGSWHTAAIHGVPQVILPDG 364 (441)
T ss_dssp CCSCCH-HHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred ecCCCH-HHHHhhCCEEEE------CCCHHHHHHHHHhCCCEEEeCCc
Confidence 999865 788999999995 23357899999999999998764
No 46
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.90 E-value=2.1e-08 Score=95.01 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=62.8
Q ss_pred CCCEEEEEEecccCCCC-HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg-~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++..+++..|++...++ .+.+.+++..+.+ .+.++++.+.+.+.+ ....+++++.+.++
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~~~~~~~-----------~~~~~~~~v~~~~~ 295 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD---------VDAEFVLTLGGGDLA-----------LLGELPANVRVVEW 295 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG---------SSSEEEEECCTTCCC-----------CCCCCCTTEEEECC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc---------cCceEEEEecCcccc-----------ccccCCCCEEEEee
Confidence 34567777788766544 3333333333321 567777766543111 11245689999998
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
. ...++|..+|++|. .+-.+++.|||++|+|+|+....+
T Consensus 296 ~-p~~~lL~~~~~~v~------h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 296 I-PLGALLETCDAIIH------HGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp C-CHHHHHTTCSEEEE------CCCHHHHHHHHHHTCCEEECCC--
T ss_pred c-CHHHHhhhhhheec------cCCccHHHHHHHhCCCEEEecCcc
Confidence 7 46789999999983 444578999999999999976654
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.82 E-value=1.2e-07 Score=90.41 Aligned_cols=92 Identities=7% Similarity=0.086 Sum_probs=65.2
Q ss_pred CCEEEEEEecc-cCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 269 EDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 269 ~~~~il~vG~l-~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+..++++.|++ ...+..+.++++++.+ +.+++++ |.+. .. ...++++|.+.++
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~-----~~--------~~~~~~~v~~~~~ 292 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH------------GRRVILSRGWAD-----LV--------LPDDGADCFAIGE 292 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT------------TCCEEECTTCTT-----CC--------CSSCGGGEEECSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC------------CCeEEEEeCCCc-----cc--------ccCCCCCEEEeCc
Confidence 35678888998 4777778888887653 4556655 6543 11 0234578999999
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
.++ .+++.+||++|..+- .++++|||++|+|+|+....+
T Consensus 293 ~~~-~~~l~~~d~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 293 VNH-QVLFGRVAAVIHHGG------AGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp CCH-HHHGGGSSEEEECCC------HHHHHHHHHHTCCEEECCCST
T ss_pred CCh-HHHHhhCCEEEeCCC------hhHHHHHHHcCCCEEECCCCC
Confidence 865 578899999996332 479999999999999987654
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.75 E-value=2.1e-07 Score=88.88 Aligned_cols=91 Identities=10% Similarity=0.099 Sum_probs=64.0
Q ss_pred CCEEEEEEeccc---CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE-ecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 269 EDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 269 ~~~~il~vG~l~---~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv-G~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+..++++.|+.. ..+..+.++++++. .+.+++++ |.+. . + . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~-----~-~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRA------------QGRRVILSRGWTE-----L-V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHH------------TTCCEEEECTTTT-----C-C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHH------------CCCeEEEEeCCcc-----c-c-c------cCCCCCEEEe
Confidence 356777789875 34556666666654 24666665 6542 1 0 0 2356789999
Q ss_pred cCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++.+ ..++|.+||++|. .+-..++.||+++|+|+|+....
T Consensus 292 ~~~~-~~~ll~~~d~~v~------~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 292 DEVN-FQALFRRVAAVIH------HGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp SSCC-HHHHGGGSSEEEE------CCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccCC-hHHHhccCCEEEe------cCChhHHHHHHHcCCCEEEccCC
Confidence 9985 6789999999995 23357999999999999998764
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.57 E-value=1.3e-07 Score=78.36 Aligned_cols=91 Identities=5% Similarity=0.041 Sum_probs=68.1
Q ss_pred CCCEEEEEEeccc---CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 268 NEDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 268 ~~~~~il~vG~l~---~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+...+++++|++. +.|.+..++++++. .+.++++++++... + .++++|++.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~~~-----~---------~~~~~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ------------IPQKVLWRFDGNKP-----D---------TLGLNTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT------------SSSEEEEECCSSCC-----T---------TCCTTEEEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh------------CCCeEEEEECCcCc-----c---------cCCCcEEEe
Confidence 4567888899985 56777777777753 24688888765411 0 345789999
Q ss_pred cCcCCHHHHH--HHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~--~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|+.++ .+++ .+||++|.. +.+.+++|||++|+|+|+....
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~------~G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITH------GGANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEEC------CCHHHHHHHHHHTCCEEECCCS
T ss_pred cCCCH-HHHhcCCCcCEEEEc------CCccHHHHHHHcCCCEEeccch
Confidence 99865 5677 899999963 3358999999999999999875
No 50
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.56 E-value=3.2e-06 Score=75.74 Aligned_cols=240 Identities=11% Similarity=0.041 Sum_probs=129.2
Q ss_pred cEEEEEeccCCC-CCh-HHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--h---hhhhh
Q 016053 75 KLVLLVSHELSL-SGG-PLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--Q---ETINT 147 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~-~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~ 147 (396)
|||+|-...... |.| -.+...||++|+ +|.+++...+.. +.+ ..|+.+..... . ....+
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~-------~~~---~~g~~v~~l~~~d~~~~~~~l~ 66 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGS-------LID---EIPYPVYELSSESIYELINLIK 66 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTC-------CGG---GCCSCEEECSSSCHHHHHHHHH
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHh-------HHH---HCCCeEEEcCccCHHHHHHHHH
Confidence 478888765444 433 377888888887 788887443211 111 22566655432 1 22334
Q ss_pred ccCCcEEEEcCc-hhhHHHHHHHhc-CCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhh
Q 016053 148 ALKADLIVLNTA-VAGKWLDAVLKE-DVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERL 225 (396)
Q Consensus 148 ~~~~DiV~~~~~-~~~~~~~~~~~~-~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 225 (396)
..++|+++.... ....|...++.. +. +++ .+.+.. . . ..+|.++........ . .|
T Consensus 67 ~~~~d~lIvD~Y~~~~~~~~~lk~~~~~-----~i~-~iDD~~-~-------~--~~~Dllin~~~~~~~---~----~Y 123 (282)
T 3hbm_A 67 EEKFELLIIDHYGISVDDEKLIKLETGV-----KIL-SFDDEI-K-------P--HHCDILLNVNAYAKA---S----DY 123 (282)
T ss_dssp HHTCSEEEEECTTCCHHHHHHHHHHHCC-----EEE-EECSSC-C-------C--CCCSEEEECSTTCCG---G----GG
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHhcCc-----EEE-EEecCC-C-------c--ccCCEEEeCCcccch---h----hc
Confidence 468999987763 444565555542 32 233 233321 0 0 123444433322211 0 11
Q ss_pred -cccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHc-CCCC-CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhh
Q 016053 226 -RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL-GVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK 302 (396)
Q Consensus 226 -g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~-g~~~-~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~ 302 (396)
+.-+.... +.-|.+.....+. +.+.- ...+ .+.+++++|......-...+++++..
T Consensus 124 ~~~~p~~~~-~l~G~~Y~~lR~e------------F~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~-------- 182 (282)
T 3hbm_A 124 EGLVPFKCE-VRCGFSYALIREE------------FYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPK-------- 182 (282)
T ss_dssp TTTCC-CCE-EEESGGGCCCCHH------------HHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCT--------
T ss_pred cccCCCCCe-EeeCCcccccCHH------------HHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhc--------
Confidence 11111122 2336443333221 11110 0112 23455667775544433444444432
Q ss_pred ccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcC
Q 016053 303 KLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 382 (396)
Q Consensus 303 ~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G 382 (396)
..+ -.+|.|.+. +..+++++..++. +++.+.++.+++.++|++||++|.+ .|.++.|++++|
T Consensus 183 ---~~~-i~vv~G~~~----~~~~~l~~~~~~~---~~v~v~~~~~~m~~~m~~aDlvI~~-------gG~T~~E~~~~g 244 (282)
T 3hbm_A 183 ---TKI-ISIATSSSN----PNLKKLQKFAKLH---NNIRLFIDHENIAKLMNESNKLIIS-------ASSLVNEALLLK 244 (282)
T ss_dssp ---TSC-EEEEECTTC----TTHHHHHHHHHTC---SSEEEEESCSCHHHHHHTEEEEEEE-------SSHHHHHHHHTT
T ss_pred ---CCC-EEEEECCCc----hHHHHHHHHHhhC---CCEEEEeCHHHHHHHHHHCCEEEEC-------CcHHHHHHHHcC
Confidence 023 456678765 3467777766643 4799999999999999999999962 258999999999
Q ss_pred CCEEEcCC
Q 016053 383 LPVLVLSE 390 (396)
Q Consensus 383 ~PVI~t~~ 390 (396)
+|.|....
T Consensus 245 ~P~i~ip~ 252 (282)
T 3hbm_A 245 ANFKAICY 252 (282)
T ss_dssp CCEEEECC
T ss_pred CCEEEEeC
Confidence 99988543
No 51
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.51 E-value=3.9e-06 Score=84.13 Aligned_cols=130 Identities=19% Similarity=0.164 Sum_probs=95.3
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH---HHHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE---LRNYV 332 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~---l~~~~ 332 (396)
+++++|+ +++.+.++++.|+..+||++. ++..+..+.+ ++++ .....+.++++.|.+.+.......- +.+.+
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va 582 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFR-IKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIA 582 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHH-HHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHH-HhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHH
Confidence 4777776 567899999999999999999 8888887764 3321 0011368999999987664322111 33333
Q ss_pred H----hcCCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 333 M----QKKIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 333 ~----~~~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
+ +-.+++ +|.|+.. . +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--
T Consensus 583 ~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLD 648 (796)
T 2c4m_A 583 DLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMD 648 (796)
T ss_dssp HHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESS
T ss_pred HHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccC
Confidence 3 124567 7888864 3 4566789999999999996579999999999999999997643
No 52
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.46 E-value=4.3e-06 Score=83.78 Aligned_cols=130 Identities=16% Similarity=0.104 Sum_probs=95.7
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH----HHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE----LRNY 331 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~----l~~~ 331 (396)
+++++|+ +++.+.++++.|+..+||++. ++..+..+.+ ++++ .....+.++++.|.+.+.... .+. +.+.
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~-i~~~~~~~~~p~q~If~GKA~P~y~~-aK~iIk~i~~v 591 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKE-IRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKV 591 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHH-HHTCTTCCCCCEEEEEECCCCTTCHH-HHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHH-HhcCCCCCCCCeEEEEEecCChhHHH-HHHHHHHHHHH
Confidence 4777786 567899999999999999999 8888887764 3332 001136899999998766432 222 3333
Q ss_pred HH----hcCCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 332 VM----QKKIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 332 ~~----~~~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++ +-.+++ +|.|+.. . +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--|
T Consensus 592 a~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 592 ADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCC
Confidence 33 124556 7888864 3 44667899999999999965799999999999999999976433
No 53
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.35 E-value=1.2e-05 Score=81.03 Aligned_cols=131 Identities=18% Similarity=0.060 Sum_probs=95.0
Q ss_pred HHHHcCC--CCCCEEEEEEecccCCCCHHHH-HHHHHHHHHHHHhh-ccCCCCEEEEEEecCCCccchHHHH---HHHHH
Q 016053 260 VRESLGV--RNEDLLFAIINSVSRGKGQDLF-LHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESE---LRNYV 332 (396)
Q Consensus 260 ~r~~~g~--~~~~~~il~vG~l~~~Kg~~~l-i~a~~~l~~~~~~~-~~~~~~~~l~ivG~g~~~~~~~~~~---l~~~~ 332 (396)
+++.+|+ +++.+.++++.|+..+||++.+ +..+..+.+. .++ .....+.++++.|.+.+.......- +.+.+
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i-~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va 616 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI-KKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIG 616 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHH-HHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHH-HhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHH
Confidence 6666776 5678999999999999999998 7888776532 222 0001168999999987664322111 44444
Q ss_pred Hhc----CCCC--cEEEecC-c-CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 333 MQK----KIQD--RVHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 333 ~~~----~l~~--~V~~~g~-~-~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+.. .+++ +|.|+.. - +-...++.+||+.++||.+-.|.+|..-+=||..|.+.|++--|
T Consensus 617 ~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 617 DVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp HHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred HHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecC
Confidence 422 2346 7888864 3 44667899999999999965799999999999999999997654
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.13 E-value=9.8e-06 Score=82.53 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=91.3
Q ss_pred HHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCC-
Q 016053 260 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ- 338 (396)
Q Consensus 260 ~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~- 338 (396)
.|..+|++++.++++++.++ .|=-+.++++..++.++ .|+.+|++..... ..++.+++.+++.|+.
T Consensus 513 ~R~~~gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~-------vP~S~L~Ll~~~~----~~~~~l~~~~~~~gi~~ 579 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNFNQL--YKIDPSTLQMWANILKR-------VPNSVLWLLRFPA----VGEPNIQQYAQNMGLPQ 579 (723)
T ss_dssp EGGGGTCCTTSEEEECCSCG--GGCCHHHHHHHHHHHHH-------CSSEEEEEEETTG----GGHHHHHHHHHHTTCCG
T ss_pred chhhcCCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHHh-------CCCCeEEEEeCcH----HHHHHHHHHHHhcCCCc
Confidence 47788999998888777665 67778888888887764 3899999987653 3467888899988876
Q ss_pred CcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 339 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 339 ~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++|+|.+.. ++-...|..+||++-|-- -+-|.+..||+.+|+|||+-.
T Consensus 580 ~r~~f~~~~~~~~~l~~~~~~Di~LDt~p---~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 580 NRIIFSPVAPKEEHVRRGQLADVCLDTPL---CNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GGEEEEECCCHHHHHHHGGGCSEEECCSS---SCCSHHHHHHHHTTCCEEBCC
T ss_pred CeEEECCCCCHHHHHHHhCCCeEEeCCCC---cCCHHHHHHHHHcCCCEEEcc
Confidence 789999975 456667788999998765 466899999999999999865
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.84 E-value=0.0035 Score=57.93 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=72.0
Q ss_pred HHHHHHcCCCCC-CEEEEEEecccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHh
Q 016053 258 EHVRESLGVRNE-DLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 334 (396)
Q Consensus 258 ~~~r~~~g~~~~-~~~il~vG~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~ 334 (396)
.++.++.|++++ .++.+..|.-.+.|.+ +.+.++++.+.+ .++++++.|... +++..++..+.
T Consensus 173 ~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~---------~g~~vvl~g~~~-----e~~~~~~i~~~ 238 (349)
T 3tov_A 173 QEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGR---------LGYKTVFFGGPM-----DLEMVQPVVEQ 238 (349)
T ss_dssp HHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHH---------HTCEEEECCCTT-----THHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHh---------CCCeEEEEeCcc-----hHHHHHHHHHh
Confidence 345556777654 4566666765566665 466666666644 256778887643 45555666665
Q ss_pred cCCCCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 335 KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 335 ~~l~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.+. ..+.+.|.. .++..+++.||++|-+-. |..-+ |.|+|+|+|+-=
T Consensus 239 ~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~Ds------G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 239 MET-KPIVATGKFQLGPLAAAMNRCNLLITNDS------GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CSS-CCEECTTCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHTTTCCEEEEC
T ss_pred ccc-ccEEeeCCCCHHHHHHHHHhCCEEEECCC------CHHHH-HHhcCCCEEEEE
Confidence 542 346666764 689999999999996432 34434 999999999853
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.54 E-value=0.015 Score=52.90 Aligned_cols=102 Identities=13% Similarity=0.060 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEEEecccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcE
Q 016053 264 LGVRNEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 341 (396)
Q Consensus 264 ~g~~~~~~~il~vG~l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V 341 (396)
.+..++.++++..|.-.+.|.+. .+.+.++.+. + .++++++.++++ .+.+..++..+.. +++
T Consensus 173 ~~~~~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~----~-----~~~~vvl~~g~~----~e~~~~~~i~~~~---~~~ 236 (326)
T 2gt1_A 173 LPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLA----D-----SGIRIKLPWGAP----HEEERAKRLAEGF---AYV 236 (326)
T ss_dssp CCTTTTSEEEEECCCSSGGGSCCHHHHHHHHHHTT----T-----TCCEEEECCSSH----HHHHHHHHHHTTC---TTE
T ss_pred ccccCCCEEEEEeCCCCccccCCHHHHHHHHHHHH----H-----CCCcEEEecCCH----HHHHHHHHHHhhC---Ccc
Confidence 44445667777777766667765 4555554442 2 467888873332 2334444444433 246
Q ss_pred EEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 342 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 342 ~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
.+.|.. .++.++++.||++|-.-. |..=+ |.|+|+|+|+-
T Consensus 237 ~l~g~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 237 EVLPKMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITV 278 (326)
T ss_dssp EECCCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEE
T ss_pred cccCCCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEE
Confidence 777764 789999999999997433 34444 77799999975
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.51 E-value=0.00044 Score=63.85 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=73.4
Q ss_pred HHHHHHHcCCC-CCCEEEEEEec-ccCCCCHH--HHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHH
Q 016053 257 REHVRESLGVR-NEDLLFAIINS-VSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 332 (396)
Q Consensus 257 ~~~~r~~~g~~-~~~~~il~vG~-l~~~Kg~~--~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~ 332 (396)
++++++.+|++ ++.++++..|. ..+.|.+. .+.++++.+.+ .++++++.|... +.+..++..
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~g~~~-----e~~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH---------CCCeEEEEeChh-----hHHHHHHHH
Confidence 45567788886 44566677776 44667765 67777766644 368888888643 344444444
Q ss_pred HhcCC---CCcEEEecCc--CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 333 MQKKI---QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 333 ~~~~l---~~~V~~~g~~--~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+..+- .+.+.+.|.. .++.++++.||++|-+.. |. +..|.|+|+|+|+--
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g~-~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------GL-MHVAAALNRPLVALY 287 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------HH-HHHHHHTTCCEEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------HH-HHHHHHcCCCEEEEE
Confidence 43220 1234566764 789999999999997644 23 444999999999853
No 58
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.43 E-value=0.0079 Score=61.38 Aligned_cols=260 Identities=11% Similarity=0.108 Sum_probs=142.7
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++++|+|.+.. ...++-++.+.+.+... ..++++.+++..... .....++..+.......+......
T Consensus 351 ~~~~ivf~s~~g~~~~~n~~~i~~~l~~~-~~~~~~~w~~~~~~~-----------~~~~~~~~~v~~~s~~~~~~l~~a 418 (729)
T 3l7i_A 351 KPKTIVFESFGGKNYSDSPKYIYEYMQKY-YPNYRYIWSFKNPDK-----------NVVPGSAEKVKRNSAEYYQAYSEA 418 (729)
T ss_dssp EEEEEEEEBGGGTBSCHHHHHHHHHHHHH-CTTSEEEEEESSGGG-----------CCCCSSCEEEETTSHHHHHHHHHE
T ss_pred cCCEEEEEECCCCCCCCCHHHHHHHHHHh-CCCceEEEEEcCccc-----------ccCCCCcEEEEECCHHHHHHHhcC
Confidence 34567777744 33466667776555432 235899988854211 011235566666555555555566
Q ss_pred cEEEEcCchhhHHHHHHHhcCCCccccceeeeeeecccccCchh--------------------hhccccccccceeecc
Q 016053 152 DLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD--------------------YVKHLPLVAGAMIDSH 211 (396)
Q Consensus 152 DiV~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~--------------------~~~~~~~~~~~~~~s~ 211 (396)
++++.++..+..+ .+.-...++.+-|+. .++.. ..+.....|..++.+.
T Consensus 419 ~~~v~n~~~~~~~--------~k~~~~~~iq~wHG~---~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~ 487 (729)
T 3l7i_A 419 SHWVSNARTPLYL--------NKKENQTYIQTWHGT---PLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNR 487 (729)
T ss_dssp EEEEESSCCCTTS--------CCCTTCEEEECCSSC---CSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSH
T ss_pred cEEEECCCCcccc--------ccCCCcEEEECCCCC---chhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCH
Confidence 7777766443210 011112344444543 11110 1112234566777776
Q ss_pred ccHHHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCC----CC---
Q 016053 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG----KG--- 284 (396)
Q Consensus 212 ~~~~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~----Kg--- 284 (396)
...+.+. +.+++++.+ ++..|..-.. ...+.......++.+++++++++++.+|+|+-..... +|
T Consensus 488 ~~~~~~~----~~f~~~~~~--i~~~G~PR~D--~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~~ 559 (729)
T 3l7i_A 488 YSTEIFR----SAFWMDEER--ILEIGYPRND--VLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKYL 559 (729)
T ss_dssp HHHHHHH----HHTCCCGGG--EEESCCGGGH--HHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSSC
T ss_pred HHHHHHH----HHhCCCcce--EEEcCCCchH--HHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccccc
Confidence 6655543 366766554 4455643321 1111111233467799999999999999999776542 11
Q ss_pred --HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEe
Q 016053 285 --QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 362 (396)
Q Consensus 285 --~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~ 362 (396)
...-++.+.+ .+. .++.+++-.- ..+.+.....+..+.+.-.....++.++|..||++|-
T Consensus 560 ~~~~~~~~~l~~---~l~------~~~~li~r~H---------p~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lIT 621 (729)
T 3l7i_A 560 FELKIDLDNLYK---ELG------DDYVILLRMH---------YLISNALDLSGYENFAIDVSNYNDVSELFLISDCLIT 621 (729)
T ss_dssp CCCTTCHHHHHH---HHT------TTEEEEECCC---------HHHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEE
T ss_pred cchhhHHHHHHH---HcC------CCeEEEEecC---------cchhccccccccCCcEEeCCCCcCHHHHHHHhCEEEe
Confidence 1111223322 221 4777776553 1111111112344566666666799999999999994
Q ss_pred cCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 363 NSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 363 pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
= ++-++.|++..++|||-.
T Consensus 622 D-------ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 622 D-------YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp S-------SCTHHHHHGGGCCCEEEE
T ss_pred e-------chHHHHhHHhhCCCEEEe
Confidence 2 457799999999999977
No 59
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=96.47 E-value=0.0036 Score=53.68 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=39.0
Q ss_pred cEEEecCcCCHHHHHH-HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 340 RVHFVNKTLTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 340 ~V~~~g~~~~~~~~~~-~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++...++.+++.++|+ +||++|. -+-..++.|++++|+|.|.-..+
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIs------haGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVIS------HAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEE------SSCHHHHHHHHHTTCCCCEECCS
T ss_pred eEEEeeccchHHHHHHhcCCEEEE------CCcHHHHHHHHHhCCCEEEEcCc
Confidence 5677788899999999 9999994 34468899999999999987654
No 60
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=95.29 E-value=0.39 Score=48.61 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=93.1
Q ss_pred HHHHc-C--CC-----CCCEEEEEEecccCCCCHHH-HHHHHHHHHHHHHh------hcc---CCCCEEEEEEecCCCcc
Q 016053 260 VRESL-G--VR-----NEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKE------KKL---EVPSVHAVIIGSDMNAQ 321 (396)
Q Consensus 260 ~r~~~-g--~~-----~~~~~il~vG~l~~~Kg~~~-li~a~~~l~~~~~~------~~~---~~~~~~l~ivG~g~~~~ 321 (396)
+++.. | ++ ++.+.++++-|+..+|.+.. ++..+..+.+.... -.. +..+..+++.|...+++
T Consensus 582 i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y 661 (879)
T 1ygp_A 582 IKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGY 661 (879)
T ss_dssp HHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTC
T ss_pred HHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCc
Confidence 55566 5 46 67899999999999999999 67776655432211 000 02468899999877665
Q ss_pred chHHHHHHHHHHhc--------CCCC--cEEEecC--cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 322 TKFESELRNYVMQK--------KIQD--RVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 322 ~~~~~~l~~~~~~~--------~l~~--~V~~~g~--~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
. .-..+.+++.+. .+.+ +|.|+.. ++-...++.+|||-.+.|.+-.|..|..-+-+|.-|.+.|+|-
T Consensus 662 ~-~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtl 740 (879)
T 1ygp_A 662 Y-MAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTV 740 (879)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEES
T ss_pred H-HHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecc
Confidence 3 333444444332 2445 7999885 3556778999999999888668999999999999999999986
Q ss_pred CC
Q 016053 390 EL 391 (396)
Q Consensus 390 ~g 391 (396)
-|
T Consensus 741 DG 742 (879)
T 1ygp_A 741 DG 742 (879)
T ss_dssp CT
T ss_pred cc
Confidence 44
No 61
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=94.06 E-value=0.26 Score=47.18 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=58.9
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++..+++..|+....-+.+.+.+.+..+.+ .+.+++++-..... ...+.+.+.... .+++..+++.
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~---------~~~~~l~~~~~~~~--~l~~~~~~~~~~---~~~~~v~~w~ 340 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKH---------SGVRFLWSNSAEKK--VFPEGFLEWMEL---EGKGMICGWA 340 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHH---------HTCEEEEECCCCGG--GSCTTHHHHHHH---HCSEEEESSC
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHh---------CCCcEEEEECCCcc--cCChhHHHhhcc---CCCEEEEccC
Confidence 455777778887632233334444433322 25666655432100 011122222210 2578888887
Q ss_pred CCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 348 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 348 ~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
.++ ++|+ ++|+||. -+-.++++||+++|+|+|+-...
T Consensus 341 pq~-~vL~h~~~~~fvt------h~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 341 PQV-EVLAHKAIGGFVS------HCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp CHH-HHHHSTTEEEEEE------CCCHHHHHHHHHTTCCEEECCCS
T ss_pred CHH-HHhCCCccCeEEe------cCCchhHHHHHHcCCCeeeccch
Confidence 665 5776 6778883 34458899999999999997653
No 62
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=93.67 E-value=0.083 Score=50.51 Aligned_cols=46 Identities=20% Similarity=0.132 Sum_probs=36.3
Q ss_pred CcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 339 DRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 339 ~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+++...++..+. ++|+ ++|++|. -+-.++++||+++|+|+|+-...
T Consensus 325 ~~~~v~~w~pq~-~vL~h~~~~~fvt------h~G~~S~~Eal~~GvP~i~~P~~ 372 (456)
T 2c1x_A 325 GYGMVVPWAPQA-EVLAHEAVGAFVT------HCGWNSLWESVAGGVPLICRPFF 372 (456)
T ss_dssp TTEEEESCCCHH-HHHTSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCS
T ss_pred CceEEecCCCHH-HHhcCCcCCEEEe------cCCcchHHHHHHhCceEEecCCh
Confidence 678888987664 7888 6778883 34468889999999999997653
No 63
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=93.63 E-value=0.35 Score=46.06 Aligned_cols=102 Identities=11% Similarity=-0.005 Sum_probs=60.5
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHH-HHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR-NYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~-~~~~~~~l~~~V~~~g~ 346 (396)
++..+++..|+.... ..+.+.+.+..+.+ .+.+++++-... ..+.+. ...++ .++++...++
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~---------~~~~flw~~~~~-----~~~~lp~~~~~~--~~~~~~vv~w 334 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEE---------CGFPFIWSFRGD-----PKEKLPKGFLER--TKTKGKIVAW 334 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHH---------HCCCEEEECCSC-----HHHHSCTTHHHH--TTTTEEEESS
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHh---------CCCeEEEEeCCc-----chhcCCHhHHhh--cCCceEEEee
Confidence 456677778887643 23444444443322 355666654332 111111 11121 2368888898
Q ss_pred cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
..+ .++++.+++-++-++ |--++++||+++|+|+|+-...
T Consensus 335 ~Pq-~~vL~h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 335 APQ-VEILKHSSVGVFLTH----SGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp CCH-HHHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCS
T ss_pred CCH-HHHHhhcCcCeEEec----CCcchHHHHHHcCCCEecCccc
Confidence 866 589999995443343 3347889999999999997653
No 64
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=93.50 E-value=0.32 Score=46.76 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC--ccc-hHHHHHHHHHHhcCCCCcEEEe
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN--AQT-KFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~--~~~-~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+...+++..|++.. ...+.+.+.+..+.+ .+.+++++-.... ++. ...+.+.+. . ++++...
T Consensus 294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~---------~~~~~l~~~~~~~~~~~~~~l~~~~~~~---~--~~~~~v~ 358 (482)
T 2pq6_A 294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLAN---------CKKSFLWIIRPDLVIGGSVIFSSEFTNE---I--ADRGLIA 358 (482)
T ss_dssp TTCEEEEECCSSSC-CCHHHHHHHHHHHHH---------TTCEEEEECCGGGSTTTGGGSCHHHHHH---H--TTTEEEE
T ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHh---------cCCcEEEEEcCCccccccccCcHhHHHh---c--CCCEEEE
Confidence 34567777788653 234444444443322 4567766543210 000 011222222 2 3689999
Q ss_pred cCcCCHHHHHHHcCE--EEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 345 NKTLTVAPYLAAIDV--LVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 345 g~~~~~~~~~~~aDv--~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
++..++ ++|+.+++ || + -|-.++++||+++|+|+|+-...
T Consensus 359 ~~~pq~-~~L~h~~~~~~v--t----h~G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 359 SWCPQD-KVLNHPSIGGFL--T----HCGWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp SCCCHH-HHHTSTTEEEEE--E----CCCHHHHHHHHHHTCCEEECCCS
T ss_pred eecCHH-HHhcCCCCCEEE--e----cCCcchHHHHHHcCCCEEecCcc
Confidence 988765 58977666 66 2 34458899999999999998654
No 65
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=87.71 E-value=1.5 Score=39.64 Aligned_cols=78 Identities=23% Similarity=0.184 Sum_probs=46.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh--------
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-------- 143 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 143 (396)
|++|||+|+ |+..+.....++|.+.|++|..+....+.... ..++.+.....|++++.....+
T Consensus 20 ~~~mrIvf~-------G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~--~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~ 90 (329)
T 2bw0_A 20 FQSMKIAVI-------GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGK--ADPLGLEAEKDGVPVFKYSRWRAKGQALPD 90 (329)
T ss_dssp -CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSC--CCHHHHHHHHHTCCEEECSCCEETTEECHH
T ss_pred CCCCEEEEE-------cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCC--CCHHHHHHHHcCCCEEecCcccccccccHH
Confidence 455799988 23456656778888889998755532211111 1123445566788887654321
Q ss_pred --hhhhccCCcEEEEcC
Q 016053 144 --TINTALKADLIVLNT 158 (396)
Q Consensus 144 --~~~~~~~~DiV~~~~ 158 (396)
...+..++|++++-.
T Consensus 91 ~~~~l~~~~~Dliv~a~ 107 (329)
T 2bw0_A 91 VVAKYQALGAELNVLPF 107 (329)
T ss_dssp HHHHHHTTCCSEEEESS
T ss_pred HHHHHHhcCCCEEEEee
Confidence 223457899998765
No 66
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.42 E-value=1.8 Score=36.72 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=40.2
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcce-EEEEcCchhhhh-
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV-QVISAKGQETIN- 146 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 146 (396)
...++.|+|++.. |....=..+++.|.++|++|.++...... . ..+...++ .++.......+.
T Consensus 16 ~~~l~~~~ilVtG------atG~iG~~l~~~L~~~G~~V~~~~R~~~~--------~-~~~~~~~~~~~~~~Dl~~~~~~ 80 (236)
T 3e8x_A 16 NLYFQGMRVLVVG------ANGKVARYLLSELKNKGHEPVAMVRNEEQ--------G-PELRERGASDIVVANLEEDFSH 80 (236)
T ss_dssp -----CCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESSGGG--------H-HHHHHTTCSEEEECCTTSCCGG
T ss_pred ccCcCCCeEEEEC------CCChHHHHHHHHHHhCCCeEEEEECChHH--------H-HHHHhCCCceEEEcccHHHHHH
Confidence 3455667877553 33356667888888999999998744221 1 11222345 554433322222
Q ss_pred hccCCcEEEEcC
Q 016053 147 TALKADLIVLNT 158 (396)
Q Consensus 147 ~~~~~DiV~~~~ 158 (396)
...++|+|+.+.
T Consensus 81 ~~~~~D~vi~~a 92 (236)
T 3e8x_A 81 AFASIDAVVFAA 92 (236)
T ss_dssp GGTTCSEEEECC
T ss_pred HHcCCCEEEECC
Confidence 235789987665
No 67
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=87.32 E-value=2.4 Score=40.61 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=30.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQK 114 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~ 114 (396)
++|+++. ....|.-.-+..|++.|.++ ||+|++++...
T Consensus 7 ~~vl~~p--~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 7 PHVAIIP--SPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp CEEEEEC--CSCHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred cEEEEec--CcchhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 5777776 33456668999999999998 99999998543
No 68
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=87.16 E-value=22 Score=34.13 Aligned_cols=168 Identities=7% Similarity=0.032 Sum_probs=89.9
Q ss_pred ccccceeeccccH-HHHHHHHHhhhcccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEeccc
Q 016053 202 LVAGAMIDSHVTA-EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 280 (396)
Q Consensus 202 ~~~~~~~~s~~~~-~~~~~~~~~~~g~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~ 280 (396)
..+.+++.+.... +.+++++.....++.+.+.-++ .+|.- ...|.-..++...+.+.++++++....
T Consensus 206 qPdilvcRs~~~l~~~~r~KiaLfc~V~~~~VI~i~-Dvdti--Y~vpl~L~~qGl~~~~~~~l~l~~~~~--------- 273 (535)
T 3nva_A 206 QPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSY-DVETS--YEVPIILESQKLVSKILSRLKLEDRQV--------- 273 (535)
T ss_dssp CCSEEEEEESSCCCHHHHHHHHHHTTCCGGGEEEEE-CCSCG--GGHHHHHHHHTHHHHHHHHTTCCCCCC---------
T ss_pred CCCEEEEecCCCCCHHHHHhhhhhcCCChhceEecC-CCChH--HHhHHHHHHCCcHHHHHHHcCCCCCCC---------
Confidence 4566666664333 5556555545567776665555 33432 222222333444567888899853211
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHH---HHHHHHHhcCCCCcEEEecCc--CC--H--H
Q 016053 281 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFES---ELRNYVMQKKIQDRVHFVNKT--LT--V--A 351 (396)
Q Consensus 281 ~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~---~l~~~~~~~~l~~~V~~~g~~--~~--~--~ 351 (396)
....+..+++.+... . -...+++-+||+-.+-...|.. .++......+..-++.++... ++ . .
T Consensus 274 ~~~~w~~~~~~~~~~-----~---~~~~v~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~~ 345 (535)
T 3nva_A 274 DLTDWISFVNNIKGI-----N---SKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLN 345 (535)
T ss_dssp CCHHHHHHHHHHHTT-----T---CCCEEEEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCT
T ss_pred CHHHHHHHHHHhhcc-----C---CCCeeEEEEEecCcCCchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccchh
Confidence 122233333333200 0 1146899999987644444544 344444455555556666643 11 1 4
Q ss_pred HHHHHcCEEEecCCCCCC----CccHHHHHHHhcCCCEEEcCC
Q 016053 352 PYLAAIDVLVQNSQAWGE----CFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 352 ~~~~~aDv~v~pS~~~~E----~fg~~~lEAma~G~PVI~t~~ 390 (396)
+.+..+|.+++|.-+ .+ +.-..+-+|...++|+++.-.
T Consensus 346 ~~L~~~DgIIlpGG~-G~~~~~g~i~~ir~a~~~~~PiLGICl 387 (535)
T 3nva_A 346 EILGNVNGIIVLPGF-GSRGAEGKIKAIKYAREHNIPFLGICF 387 (535)
T ss_dssp TTTTSCSEEEECCCC-SSTTHHHHHHHHHHHHHHTCCEEEETH
T ss_pred hhccCCCEEEECCCC-CCccHHHHHHHHHHHHHcCCcEEEECc
Confidence 678899999988641 21 111234566778999987643
No 69
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=85.78 E-value=1.3 Score=39.09 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=29.5
Q ss_pred cccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
.|+.||||+|.......+.. ......++.|++.|++|.++-
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 57778999998654455544 566677899999999999986
No 70
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=82.92 E-value=2.9 Score=37.52 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=46.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc----hhhhhhhhhhhhhcceEEEEcCch----
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQ---- 142 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---- 142 (396)
||++|||+|+.. ..+.....++|.+.||+|..+....+... .....++.+.....|++++.....
T Consensus 4 m~~~mrivf~Gt-------~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~ 76 (318)
T 3q0i_A 4 MSQSLRIVFAGT-------PDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDE 76 (318)
T ss_dssp ---CCEEEEECC-------SHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHH
T ss_pred cccCCEEEEEec-------CHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHH
Confidence 566789998863 24555556777788999886553321111 011223455666778888754332
Q ss_pred -hhhhhccCCcEEEEcC
Q 016053 143 -ETINTALKADLIVLNT 158 (396)
Q Consensus 143 -~~~~~~~~~DiV~~~~ 158 (396)
.......++|++++-.
T Consensus 77 ~~~~l~~~~~Dliv~~~ 93 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVA 93 (318)
T ss_dssp HHHHHHTTCCSEEEESS
T ss_pred HHHHHHhcCCCEEEEeC
Confidence 1234568999998865
No 71
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=81.28 E-value=2.1 Score=35.24 Aligned_cols=40 Identities=15% Similarity=0.083 Sum_probs=29.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+||||+++.... .|-.++....+++.+.+.|++|.++..
T Consensus 3 M~M~kilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSR-HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred CCcceEEEEEeCC-CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 5567899888543 344458888889999999999998863
No 72
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=79.62 E-value=4.7 Score=34.71 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=27.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+...-. ..-+..|.++|++.| +|+|+.+...
T Consensus 2 M~ILlTNDDGi~---apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 2 PTFLLVNDDGYF---SPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp CEEEEECSSCTT---CHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CEEEEECCCCCC---CHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 589877753221 267888899999998 9999996543
No 73
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=79.55 E-value=5.5 Score=33.82 Aligned_cols=96 Identities=7% Similarity=-0.013 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCC--CccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEe
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM--NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 362 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~--~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~ 362 (396)
++.+.++++++.+ .+-++.++..+. .....+...+.+..+++|.+ +..+-..++..+.+..||.+++
T Consensus 17 l~~~~~~l~~~~~---------~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~--~~~v~~~~d~~~~l~~ad~I~l 85 (229)
T 1fy2_A 17 LEHALPLIANQLN---------GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVN--VTGIHRVADPLAAIEKAEIIIV 85 (229)
T ss_dssp TTTTHHHHHHHHT---------TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCE--EEETTSSSCHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHhc---------CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCE--EEEEeccccHHHHHhcCCEEEE
Confidence 4445666665432 356778877653 12234566777788888853 5444334667788999999999
Q ss_pred cCCC-------C-CCCccHHHHHHHhcCCCEEEcCCC
Q 016053 363 NSQA-------W-GECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 363 pS~~-------~-~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
|--. | .-++--.+-|+...|+|++.+..|
T Consensus 86 pGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG 122 (229)
T 1fy2_A 86 GGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAG 122 (229)
T ss_dssp CCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred CCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHH
Confidence 8531 0 112334567888899999988654
No 74
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=79.43 E-value=2 Score=35.41 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=29.4
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++|||+++... .|-.++....+++.+.+.|++|.++..
T Consensus 3 ~mmkilii~~S--~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 3 CKPNILVLFYG--YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCCEEEEEECC--SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCcEEEEEEeC--ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 34689988865 444458888888999989999998863
No 75
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=77.81 E-value=12 Score=27.34 Aligned_cols=74 Identities=14% Similarity=0.331 Sum_probs=47.2
Q ss_pred EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh--cCCCEEEc
Q 016053 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA--FQLPVLVL 388 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma--~G~PVI~t 388 (396)
++++|.|...+ -..+.+++.+++.|++-.|.-.+ ..++...+..+|+++.+.. -... ..-++..+ .++||+.-
T Consensus 8 lvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~-~~~~~~~~~~~D~Ii~t~~--l~~~-~~~~~~~~~~~~~pv~~I 82 (109)
T 2l2q_A 8 LLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIA-ETRLSEVVDRFDVVLLAPQ--SRFN-KKRLEEITKPKGIPIEII 82 (109)
T ss_dssp EEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEEC-STTHHHHTTTCSEEEECSC--CSSH-HHHHHHHHHHHTCCEEEC
T ss_pred EEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEec-HHHHHhhcCCCCEEEECCc--cHHH-HHHHHHHhcccCCCEEEE
Confidence 56667776555 56778999999888864443333 3567777889999988766 2221 23333332 58888654
Q ss_pred C
Q 016053 389 S 389 (396)
Q Consensus 389 ~ 389 (396)
+
T Consensus 83 ~ 83 (109)
T 2l2q_A 83 N 83 (109)
T ss_dssp C
T ss_pred C
Confidence 3
No 76
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=77.38 E-value=10 Score=27.72 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=39.4
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
-++++|.|...+ -..+.+++.+++.|++-.|.-.+ ..++......+|++++...
T Consensus 6 Ill~Cg~G~sTS-~l~~k~~~~~~~~gi~~~i~a~~-~~~~~~~~~~~Dvil~~pq 59 (106)
T 1e2b_A 6 IYLFSSAGMSTS-LLVSKMRAQAEKYEVPVIIEAFP-ETLAGEKGQNADVVLLGPQ 59 (106)
T ss_dssp EEEECSSSTTTH-HHHHHHHHHHHHSCCSEEEEEEC-SSSTTHHHHHCSEEEECTT
T ss_pred EEEECCCchhHH-HHHHHHHHHHHHCCCCeEEEEec-HHHHHhhccCCCEEEEccc
Confidence 467788887555 46678999999999874443333 4567778899999998766
No 77
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=77.02 E-value=8.9 Score=34.77 Aligned_cols=88 Identities=13% Similarity=0.058 Sum_probs=48.0
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhc
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA 148 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (396)
..|+++||.+|.. |+... ..++..|.+. |+++..++...+. . ........++..+ .....+...
T Consensus 23 ~~m~~~rigiIG~----G~~g~--~~~~~~l~~~~~~~l~av~d~~~~----~---~~~~a~~~g~~~~--~~~~~ll~~ 87 (350)
T 3rc1_A 23 ANANPIRVGVIGC----ADIAW--RRALPALEAEPLTEVTAIASRRWD----R---AKRFTERFGGEPV--EGYPALLER 87 (350)
T ss_dssp ---CCEEEEEESC----CHHHH--HTHHHHHHHCTTEEEEEEEESSHH----H---HHHHHHHHCSEEE--ESHHHHHTC
T ss_pred CCCCceEEEEEcC----cHHHH--HHHHHHHHhCCCeEEEEEEcCCHH----H---HHHHHHHcCCCCc--CCHHHHhcC
Confidence 3567789999973 22211 1355666665 7888877654321 0 1112223355554 344556666
Q ss_pred cCCcEEEEcCchhhH--HHHHHHhcC
Q 016053 149 LKADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
.++|+|++.++.... +...+...+
T Consensus 88 ~~~D~V~i~tp~~~h~~~~~~al~aG 113 (350)
T 3rc1_A 88 DDVDAVYVPLPAVLHAEWIDRALRAG 113 (350)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHHHTT
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCC
Confidence 789999998865433 444455555
No 78
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=76.29 E-value=24 Score=31.91 Aligned_cols=96 Identities=9% Similarity=0.065 Sum_probs=60.0
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
+...|+++|-= .--..+++++.. .++++++-+-+. ..+..++.+++++++..+.. ..
T Consensus 5 ~~~~vgiiG~G---~ig~~~~~~l~~-----------~~~~~lv~v~d~------~~~~~~~~a~~~~~~~~~~~---~~ 61 (362)
T 1ydw_A 5 TQIRIGVMGCA---DIARKVSRAIHL-----------APNATISGVASR------SLEKAKAFATANNYPESTKI---HG 61 (362)
T ss_dssp -CEEEEEESCC---TTHHHHHHHHHH-----------CTTEEEEEEECS------SHHHHHHHHHHTTCCTTCEE---ES
T ss_pred CceEEEEECch---HHHHHHHHHHhh-----------CCCcEEEEEEcC------CHHHHHHHHHHhCCCCCCee---eC
Confidence 45677778751 111234444432 167887766553 34556677777775322222 25
Q ss_pred CHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 349 TVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 349 ~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++.+++. .+|+++..+. ...-.-.+.+|+..|++|++-.
T Consensus 62 ~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~V~~EK 102 (362)
T 1ydw_A 62 SYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKHILLEK 102 (362)
T ss_dssp SHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCEEEECS
T ss_pred CHHHHhcCCCCCEEEEcCC--hHHHHHHHHHHHHCCCeEEEec
Confidence 6788887 4899988777 5555566789999999999843
No 79
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=75.67 E-value=4.6 Score=34.78 Aligned_cols=42 Identities=14% Similarity=0.016 Sum_probs=29.9
Q ss_pred ccEEEEEeccCC---C-----CChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 74 SKLVLLVSHELS---L-----SGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 74 ~~kIl~v~~~~~---~-----gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
|+|||++..... . .|.+ .-+..-...|++.|++|+++++.+.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~ 59 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGT 59 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 478999976531 1 2554 5556667889999999999996543
No 80
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=74.65 E-value=16 Score=30.94 Aligned_cols=75 Identities=13% Similarity=0.032 Sum_probs=46.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh--------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-------- 143 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 143 (396)
||||+++.+ |....+..+.++|.+. +++|..+....+.. ...+.....|++++......
T Consensus 22 ~~rI~~l~S-----G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~ 90 (229)
T 3auf_A 22 MIRIGVLIS-----GSGTNLQAILDGCREGRIPGRVAVVISDRADA------YGLERARRAGVDALHMDPAAYPSRTAFD 90 (229)
T ss_dssp CEEEEEEES-----SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC------HHHHHHHHTTCEEEECCGGGSSSHHHHH
T ss_pred CcEEEEEEe-----CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch------HHHHHHHHcCCCEEEECcccccchhhcc
Confidence 358888863 3346788888888876 67876555433221 12345567789887543211
Q ss_pred ----hhhhccCCcEEEEcCc
Q 016053 144 ----TINTALKADLIVLNTA 159 (396)
Q Consensus 144 ----~~~~~~~~DiV~~~~~ 159 (396)
...+..++|+|++-..
T Consensus 91 ~~~~~~l~~~~~Dliv~agy 110 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGY 110 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEcCh
Confidence 2234579999988763
No 81
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=73.67 E-value=13 Score=30.96 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=45.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh---------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE--------- 143 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (396)
|||.++.. |....+..+.+++.+. +++|..+....+.. +..+.....|++++......
T Consensus 4 ~ki~vl~s-----G~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~------~v~~~A~~~gIp~~~~~~~~~~~~~~~~~ 72 (212)
T 3av3_A 4 KRLAVFAS-----GSGTNFQAIVDAAKRGDLPARVALLVCDRPGA------KVIERAARENVPAFVFSPKDYPSKAAFES 72 (212)
T ss_dssp EEEEEECC-----SSCHHHHHHHHHHHTTCCCEEEEEEEESSTTC------HHHHHHHHTTCCEEECCGGGSSSHHHHHH
T ss_pred cEEEEEEE-----CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCc------HHHHHHHHcCCCEEEeCcccccchhhhHH
Confidence 57777762 3345778888888876 68887655443221 23445567788887543211
Q ss_pred ---hhhhccCCcEEEEcC
Q 016053 144 ---TINTALKADLIVLNT 158 (396)
Q Consensus 144 ---~~~~~~~~DiV~~~~ 158 (396)
...+..++|+|++-.
T Consensus 73 ~~~~~l~~~~~Dliv~a~ 90 (212)
T 3av3_A 73 EILRELKGRQIDWIALAG 90 (212)
T ss_dssp HHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHhcCCCEEEEch
Confidence 223457999998875
No 82
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=73.25 E-value=5.7 Score=34.11 Aligned_cols=44 Identities=14% Similarity=0.130 Sum_probs=30.3
Q ss_pred ccccEEEEEeccC-C-------CCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 72 MKSKLVLLVSHEL-S-------LSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 72 m~~~kIl~v~~~~-~-------~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
|.|+|||++.+.. . ..|.+ .=+..-...|++.|++|++++..+.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4467899987652 1 14554 5666667889999999999996543
No 83
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=73.19 E-value=50 Score=29.31 Aligned_cols=42 Identities=12% Similarity=0.002 Sum_probs=27.6
Q ss_pred ccccEEEEEeccCCC-CChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|.+++|.++.+.... .-.......+.+++.+.|+++.++...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~ 43 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAE 43 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 445689999876433 222356666667777889999988643
No 84
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=72.90 E-value=28 Score=30.99 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=59.0
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT 349 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~ 349 (396)
...++++|-= .--..+++++.+. ++++++-+-+. ..+..++.+++++.+. ..++
T Consensus 5 ~~~igiiG~G---~~g~~~~~~l~~~-----------~~~~l~av~d~------~~~~~~~~~~~~~~~~------~~~~ 58 (330)
T 3e9m_A 5 KIRYGIMSTA---QIVPRFVAGLRES-----------AQAEVRGIASR------RLENAQKMAKELAIPV------AYGS 58 (330)
T ss_dssp CEEEEECSCC---TTHHHHHHHHHHS-----------SSEEEEEEBCS------SSHHHHHHHHHTTCCC------CBSS
T ss_pred eEEEEEECch---HHHHHHHHHHHhC-----------CCcEEEEEEeC------CHHHHHHHHHHcCCCc------eeCC
Confidence 4567777751 1112344554431 67887755443 2355667777776531 1368
Q ss_pred HHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 350 VAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 350 ~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
..+++. .+|+++..+. ...-.-.+.+|+..|++|++-.-
T Consensus 59 ~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl~EKP 99 (330)
T 3e9m_A 59 YEELCKDETIDIIYIPTY--NQGHYSAAKLALSQGKPVLLEKP 99 (330)
T ss_dssp HHHHHHCTTCSEEEECCC--GGGHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHhcCCCCCEEEEcCC--CHHHHHHHHHHHHCCCeEEEeCC
Confidence 888998 7899888776 44445557899999999997553
No 85
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=72.77 E-value=9.7 Score=32.71 Aligned_cols=41 Identities=22% Similarity=0.155 Sum_probs=31.0
Q ss_pred cccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
.|++|||++|......+|.. ..+..+++.+.+.|++|.++-
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~id 72 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEE
Confidence 34557999998766656655 666667888888999999886
No 86
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=72.58 E-value=10 Score=28.93 Aligned_cols=70 Identities=14% Similarity=0.103 Sum_probs=41.7
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--hhhhhh--cc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--QETINT--AL 149 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~ 149 (396)
+++|+++. +| ..-..+++.|.+.|++|.++..... ..+.+...+..++.... ...+.. ..
T Consensus 6 ~~~v~I~G-----~G--~iG~~la~~L~~~g~~V~~id~~~~---------~~~~~~~~~~~~~~gd~~~~~~l~~~~~~ 69 (141)
T 3llv_A 6 RYEYIVIG-----SE--AAGVGLVRELTAAGKKVLAVDKSKE---------KIELLEDEGFDAVIADPTDESFYRSLDLE 69 (141)
T ss_dssp CCSEEEEC-----CS--HHHHHHHHHHHHTTCCEEEEESCHH---------HHHHHHHTTCEEEECCTTCHHHHHHSCCT
T ss_pred CCEEEEEC-----CC--HHHHHHHHHHHHCCCeEEEEECCHH---------HHHHHHHCCCcEEECCCCCHHHHHhCCcc
Confidence 35677765 23 4677889999999999999864321 11222334555544332 222222 25
Q ss_pred CCcEEEEcCc
Q 016053 150 KADLIVLNTA 159 (396)
Q Consensus 150 ~~DiV~~~~~ 159 (396)
++|+|++..+
T Consensus 70 ~~d~vi~~~~ 79 (141)
T 3llv_A 70 GVSAVLITGS 79 (141)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEecC
Confidence 7899988765
No 87
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=72.52 E-value=9.1 Score=32.96 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=26.3
Q ss_pred ccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 74 SKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
|+|||+.+.. |.. .-+..|.++|++.| +|+|+++...
T Consensus 1 Mp~ILlTNDD----Gi~apGi~~L~~~l~~~g-~V~VvAP~~~ 38 (251)
T 2wqk_A 1 MPTFLLVNDD----GYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSS----CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEEcCC----CCCcHHHHHHHHHHHhCC-CEEEEeeCCC
Confidence 3588877653 232 56788899999998 7999986543
No 88
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=71.98 E-value=13 Score=31.01 Aligned_cols=77 Identities=21% Similarity=0.157 Sum_probs=46.3
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCC--CEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch------
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ------ 142 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (396)
.|+++||+++.+ |....+..+.+++++.+ ++|..+..+.+... -.+.....|++++.....
T Consensus 4 ~m~~~ri~vl~S-----G~gsnl~all~~~~~~~l~~~I~~Visn~~~a~------~l~~A~~~gIp~~~~~~~~~~~r~ 72 (209)
T 4ds3_A 4 SMKRNRVVIFIS-----GGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAG------GLAKAEAAGIATQVFKRKDFASKE 72 (209)
T ss_dssp --CCEEEEEEES-----SCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCT------HHHHHHHTTCCEEECCGGGSSSHH
T ss_pred cCCCccEEEEEE-----CCcHHHHHHHHHHHcCCCCcEEEEEEECCcccH------HHHHHHHcCCCEEEeCccccCCHH
Confidence 366678887762 44467888888887654 67776554433211 123455678888764321
Q ss_pred ------hhhhhccCCcEEEEcC
Q 016053 143 ------ETINTALKADLIVLNT 158 (396)
Q Consensus 143 ------~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 73 ~~d~~~~~~l~~~~~Dliv~ag 94 (209)
T 4ds3_A 73 AHEDAILAALDVLKPDIICLAG 94 (209)
T ss_dssp HHHHHHHHHHHHHCCSEEEESS
T ss_pred HHHHHHHHHHHhcCCCEEEEec
Confidence 1223457999999876
No 89
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=71.84 E-value=17 Score=30.48 Aligned_cols=74 Identities=9% Similarity=0.041 Sum_probs=45.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCC--EEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------- 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 142 (396)
|||+++.+ |....+..+.++|.+.++ +|..+....+.. ...+.....|++++.....
T Consensus 2 ~rI~vl~S-----G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 70 (216)
T 2ywr_A 2 LKIGVLVS-----GRGSNLQAIIDAIESGKVNASIELVISDNPKA------YAIERCKKHNVECKVIQRKEFPSKKEFEE 70 (216)
T ss_dssp EEEEEEEC-----SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC------HHHHHHHHHTCCEEECCGGGSSSHHHHHH
T ss_pred CEEEEEEe-----CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh------HHHHHHHHcCCCEEEeCcccccchhhhhH
Confidence 58887762 434678888899988877 665444333221 1334456678888753321
Q ss_pred --hhhhhccCCcEEEEcCc
Q 016053 143 --ETINTALKADLIVLNTA 159 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~~ 159 (396)
....+..++|+|++-..
T Consensus 71 ~~~~~l~~~~~Dliv~a~y 89 (216)
T 2ywr_A 71 RMALELKKKGVELVVLAGF 89 (216)
T ss_dssp HHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHhcCCCEEEEeCc
Confidence 12234579999988753
No 90
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=71.78 E-value=5 Score=35.21 Aligned_cols=42 Identities=26% Similarity=0.284 Sum_probs=29.6
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+|+|++.+.+.-...|-.....+|+.+|+++|++|.++-.+
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 445566666654444455589999999999999999988644
No 91
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=71.42 E-value=6.6 Score=32.25 Aligned_cols=39 Identities=13% Similarity=0.004 Sum_probs=29.1
Q ss_pred ccEEEEEeccCCCCCh-HHHHHHHHHH-HHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGG-PLLLMELAFL-LRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~-~~~~~~l~~~-L~~~G~~V~vi~~ 112 (396)
||||+++......+|. ......+++. +.+.|++|.++-.
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 3689988866554554 4677777788 8888999998873
No 92
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=70.71 E-value=33 Score=30.56 Aligned_cols=86 Identities=17% Similarity=0.303 Sum_probs=51.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (396)
|+|.++. .||. =+..+++.|.++|++|++.-..... +..+.+...|+.+..-.....+. ..++|+|
T Consensus 5 ~~i~~iG----iGg~--Gms~~A~~L~~~G~~V~~~D~~~~~-------~~~~~L~~~gi~v~~g~~~~~l~-~~~~d~v 70 (326)
T 3eag_A 5 KHIHIIG----IGGT--FMGGLAAIAKEAGFEVSGCDAKMYP-------PMSTQLEALGIDVYEGFDAAQLD-EFKADVY 70 (326)
T ss_dssp CEEEEES----CCSH--HHHHHHHHHHHTTCEEEEEESSCCT-------THHHHHHHTTCEEEESCCGGGGG-SCCCSEE
T ss_pred cEEEEEE----ECHH--HHHHHHHHHHhCCCEEEEEcCCCCc-------HHHHHHHhCCCEEECCCCHHHcC-CCCCCEE
Confidence 5787775 2442 3445788899999999987533211 12334556688776432222221 0368999
Q ss_pred EEcC--chhhHHHHHHHhcCCC
Q 016053 155 VLNT--AVAGKWLDAVLKEDVP 174 (396)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~~ 174 (396)
+... +.....+..+...++|
T Consensus 71 V~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 71 VIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp EECTTCCTTCHHHHHHHHTTCC
T ss_pred EECCCcCCCCHHHHHHHHcCCc
Confidence 8775 3345566777777866
No 93
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=70.53 E-value=5.9 Score=33.06 Aligned_cols=38 Identities=13% Similarity=0.002 Sum_probs=28.8
Q ss_pred ccEEEEEeccCC--CCChH-HHHHHHHHHHHhC--CCEEEEEe
Q 016053 74 SKLVLLVSHELS--LSGGP-LLLMELAFLLRGV--GTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~--~gG~~-~~~~~l~~~L~~~--G~~V~vi~ 111 (396)
|||||+|..... .+|.. .....+++.+++. |++|.++-
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 468999987665 45544 6667778888876 89999887
No 94
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=70.03 E-value=26 Score=31.82 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=60.0
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT 349 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~ 349 (396)
++.|+.+|-= .-+...++.++.. ++++++-+-+. ..+..++.+++++... ...+
T Consensus 26 ~irvgiiG~G--~~~~~~~~~~~~~------------~~~~lvav~d~------~~~~a~~~a~~~~~~~------~~~~ 79 (361)
T 3u3x_A 26 ELRFAAVGLN--HNHIYGQVNCLLR------------AGARLAGFHEK------DDALAAEFSAVYADAR------RIAT 79 (361)
T ss_dssp CCEEEEECCC--STTHHHHHHHHHH------------TTCEEEEEECS------CHHHHHHHHHHSSSCC------EESC
T ss_pred CcEEEEECcC--HHHHHHHHHHhhc------------CCcEEEEEEcC------CHHHHHHHHHHcCCCc------ccCC
Confidence 4678888852 1233344444432 68888877654 3456677777775321 1267
Q ss_pred HHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 350 VAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 350 ~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+.++++. .|+++..+. ...-.-.+.+|+..|++|++=.
T Consensus 80 ~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~EK 119 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAV--SSERAELAIRAMQHGKDVLVDK 119 (361)
T ss_dssp HHHHHTCTTCCEEEECCC--HHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHhcCCCCCEEEEeCC--hHHHHHHHHHHHHCCCeEEEeC
Confidence 8888886 788887766 4444455789999999999744
No 95
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=69.40 E-value=24 Score=29.20 Aligned_cols=275 Identities=14% Similarity=0.084 Sum_probs=132.9
Q ss_pred cEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-hhhhhccCCc
Q 016053 75 KLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ-ETINTALKAD 152 (396)
Q Consensus 75 ~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D 152 (396)
|+|++.... ...-|..++..+.-..+.+.||+|+++.......... -...-....++++..... +.+..-...|
T Consensus 2 mricifmarglegcgvtkfsleqrdwfiknghevtlvyakdksftrt----sshdhksfsipvilakeydkalklvndcd 77 (401)
T 1xv5_A 2 MRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRT----SSHDHKSFSIPVILAKEYDKALKLVNDCD 77 (401)
T ss_dssp CEEEEEETTCCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTT----TSSSCTTTCEEECTTTCHHHHHHHHTSCS
T ss_pred ceEEEEeeccccccCceeeehhhhhhhhcCCcEEEEEEecccccccc----ccccCccccceeEehhhhHHHhhhhccCc
Confidence 477766543 4446677888999999999999999998543321111 111112234555433322 3333447899
Q ss_pred EEEEcCchhhH----HH---HHHHhcCCCccccceeeeeeecc--cccCchhhhccccccccceeeccc---cHHHHHHH
Q 016053 153 LIVLNTAVAGK----WL---DAVLKEDVPRVLPNVLWWIHEMR--GHYFKLDYVKHLPLVAGAMIDSHV---TAEYWKNR 220 (396)
Q Consensus 153 iV~~~~~~~~~----~~---~~~~~~~~~~~~~~vv~~~h~~~--~~~~~~~~~~~~~~~~~~~~~s~~---~~~~~~~~ 220 (396)
++++++..+.. -+ ..++..--|. ..++..-|+.. +.......-...++++-+...|.. ....++++
T Consensus 78 iliinsvpatsvqeatinnykklldnikps--irvvvyqhdhsvlslrrnlgleetvrradvifshsdngdfnkvlmkew 155 (401)
T 1xv5_A 78 ILIINSVPATSVQEATINNYKKLLDNIKPS--IRVVVYQHDHSVLSLRRNLGLEETVRRADVIFSHSDNGDFNKVLMKEW 155 (401)
T ss_dssp EEEEEECCBTTSCHHHHHHHHHHHHHSCTT--SEEEEEECCCSHHHHTTBSSHHHHHHHCSEEEESCTTSHHHHTHHHHH
T ss_pred EEEEccCccchhHHHHHhhHHHHHhcCCCc--eEEEEEeccchhhhhhhhcChHHhhhhhceEEecCCCCcHHHHHHHhh
Confidence 99988732211 11 1112221222 23444455431 111111222334556655555432 22223333
Q ss_pred HHhhhcc--cCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCC---CCEEEEEEecccCCCCHHHHHHHHHHH
Q 016053 221 TRERLRI--KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN---EDLLFAIINSVSRGKGQDLFLHSFYES 295 (396)
Q Consensus 221 ~~~~~g~--~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~---~~~~il~vG~l~~~Kg~~~li~a~~~l 295 (396)
..+...+ +.+..-.++|- .|.-+ -..+|.-+--+- +-.+=-++||-...||.-.+.+.-.++
T Consensus 156 ypetvslfddieeaptvynf------qppmd-------ivkvrstywkdvseinmninrwigrtttwkgfyqmfdfhekf 222 (401)
T 1xv5_A 156 YPETVSLFDDIEEAPTVYNF------QPPMD-------IVKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKF 222 (401)
T ss_dssp SCSSCCSSSCCCCCCCEEEC------CCCBC-------HHHHHHHHCCCGGGCEEEEEEEECCSCGGGCHHHHHHHHHHT
T ss_pred ccchhhhhcchhhCCceecc------CCCce-------eeeeehhhhccHHHhhcchhhhhcccchhHhHHHHhhHHHHh
Confidence 2222111 01111122322 11111 122333332211 223446899999999998888877665
Q ss_pred HHHHHhhccCCCCE-EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc---------------------CCHHHH
Q 016053 296 LELIKEKKLEVPSV-HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---------------------LTVAPY 353 (396)
Q Consensus 296 ~~~~~~~~~~~~~~-~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~---------------------~~~~~~ 353 (396)
.+ |.- .-++-| .++++. + -.+++.|++ ..+.|.+ .++.+-
T Consensus 223 lk---------pagkstvmeg--lerspa----f-iaikekgip--yeyygnreidkmnlapnqpaqildcyinsemler 284 (401)
T 1xv5_A 223 LK---------PAGKSTVMEG--LERSPA----F-IAIKEKGIP--YEYYGNREIDKMNLAPNQPAQILDCYINSEMLER 284 (401)
T ss_dssp TT---------TTTCEEEEEC--CCCSHH----H-HHHHHTTCC--EEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHH
T ss_pred cC---------ccchhhhhhh--hhcCCc----e-EEEcccCCc--hhhcCcchhhhhcCCCCCcchhhhheecHHHHHH
Confidence 42 322 233333 222221 1 134455665 4455521 346666
Q ss_pred HHHcCEEEecCCC----CCCCccHHHHHHHhcCCCEE
Q 016053 354 LAAIDVLVQNSQA----WGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 354 ~~~aDv~v~pS~~----~~E~fg~~~lEAma~G~PVI 386 (396)
++.+.....-|.. -..+.-.+-+|--|||.-.|
T Consensus 285 msksgfgyqlsklnqkylqrsleythlelgacgtipv 321 (401)
T 1xv5_A 285 MSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPV 321 (401)
T ss_dssp HHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEE
T ss_pred hhhcCcccchHHHHHHHHHhhhhhheeecccccceee
Confidence 7777666655542 12345577899999996544
No 96
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=69.30 E-value=9.1 Score=28.01 Aligned_cols=40 Identities=18% Similarity=0.094 Sum_probs=29.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+++||+++|...- |....+..+-+.+.++|+++.+....
T Consensus 1 M~mkkIll~Cg~G~--sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGM--STSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSST--TTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCch--hHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 55678999996432 23377778889999999998877643
No 97
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=69.18 E-value=6.7 Score=32.77 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=27.4
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|||++..+. +-+.....++++.|++.|++|.++...
T Consensus 3 ~~k~IllgvTG---aiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTG---ASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECS---SSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEEC---HHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 44677665531 122377889999999999999998854
No 98
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=68.82 E-value=13 Score=32.65 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=26.0
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+.. |.. .-+..|.++|++.| +|+|+.+...
T Consensus 1 M~ILlTNDD----Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~ 37 (280)
T 1l5x_A 1 MKILVTNDD----GVHSPGLRLLYQFALSLG-DVDVVAPESP 37 (280)
T ss_dssp CEEEEECSS----CTTCHHHHHHHHHHGGGS-EEEEEEESSC
T ss_pred CeEEEEcCC----CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 478876653 322 56788889999888 9999996543
No 99
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=68.58 E-value=15 Score=33.12 Aligned_cols=95 Identities=17% Similarity=0.113 Sum_probs=61.6
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
...+.++.+|-=.- |...++.+++.. ++++++-+.+- ..+..++.+++++++. + .
T Consensus 21 ~~mirigiIG~G~i--g~~~~~~~~~~~-----------~~~~lvav~d~------~~~~a~~~a~~~g~~~-~-----y 75 (350)
T 4had_A 21 QSMLRFGIISTAKI--GRDNVVPAIQDA-----------ENCVVTAIASR------DLTRAREMADRFSVPH-A-----F 75 (350)
T ss_dssp -CCEEEEEESCCHH--HHHTHHHHHHHC-----------SSEEEEEEECS------SHHHHHHHHHHHTCSE-E-----E
T ss_pred cCccEEEEEcChHH--HHHHHHHHHHhC-----------CCeEEEEEECC------CHHHHHHHHHHcCCCe-e-----e
Confidence 34578888875210 112234444432 78888866654 4566788888888652 1 2
Q ss_pred CCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 348 LTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 348 ~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++..++++. .|+++..+. ...-.-.+.+|+..|++|++=.
T Consensus 76 ~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 76 GSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp SSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCEEEEeC
Confidence 678888875 688887776 4444555789999999998743
No 100
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=68.08 E-value=7.6 Score=32.15 Aligned_cols=38 Identities=18% Similarity=0.137 Sum_probs=29.1
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
+|||++|.... .|-..+....+++.+.+.|++|.++..
T Consensus 6 mmkilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 6 PVKLAIVFYSS-TGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEEECC-CChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 46899888544 333458888889999999999999873
No 101
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=67.90 E-value=54 Score=27.58 Aligned_cols=210 Identities=7% Similarity=-0.001 Sum_probs=100.9
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
.++|.++.+.....-.......+.+++.+.|+++.++..... ...... .. ......++|.
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~~----------~~-~~l~~~~vdg 61 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQ---------PDSERQ----------LQ-QLFRARRCDA 61 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTC---------HHHHHH----------HH-HHHHHTTCSE
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCC---------HHHHHH----------HH-HHHHHcCCCE
Confidence 357888887644333346677777888889999998874422 110000 00 1122357888
Q ss_pred EEEcCch--hhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCC
Q 016053 154 IVLNTAV--AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPD 231 (396)
Q Consensus 154 V~~~~~~--~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k 231 (396)
|++.... ....+..+...++| ++......... ....+..+.........+.+.+ .| ..+
T Consensus 62 iIi~~~~~~~~~~~~~~~~~~iP-----vV~~~~~~~~~-----------~~~~V~~d~~~~~~~a~~~L~~-~G--~~~ 122 (272)
T 3o74_A 62 LFVASCLPPEDDSYRELQDKGLP-----VIAIDRRLDPA-----------HFCSVISDDRDASRQLAASLLS-SA--PRS 122 (272)
T ss_dssp EEECCCCCSSCCHHHHHHHTTCC-----EEEESSCCCTT-----------TCEEEEECHHHHHHHHHHHHHT-TC--CSE
T ss_pred EEEecCccccHHHHHHHHHcCCC-----EEEEccCCCcc-----------ccCEEEEchHHHHHHHHHHHHH-CC--CcE
Confidence 8776432 23344556666766 34322211100 1122222333333333344432 23 345
Q ss_pred EEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCC-CEE
Q 016053 232 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP-SVH 310 (396)
Q Consensus 232 ~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~-~~~ 310 (396)
+.++....+.... .....-+++.+.-..-+......+.. ..+...+++.++.+.. + +..
T Consensus 123 i~~i~~~~~~~~~---------~~R~~gf~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~-------~~~~~ 182 (272)
T 3o74_A 123 IALIGARPELSVS---------QARAGGFDEALQGYTGEVRRYQGEAF----SRECGQRLMQQLIDDL-------GGLPD 182 (272)
T ss_dssp EEEEEECTTSHHH---------HHHHHHHHHHTTTCCSEEEEEEESSS----SHHHHHHHHHHHHHHH-------TSCCS
T ss_pred EEEEecCCCCccH---------HHHHHHHHHHHHHcCCChheeecCCC----CHHHHHHHHHHHHhcC-------CCCCc
Confidence 6666533221111 01122333333221112333333333 3344445555544322 4 566
Q ss_pred EEEEecCCCccchHHHHHHHHHHhcC-CCCcEEEecCc
Q 016053 311 AVIIGSDMNAQTKFESELRNYVMQKK-IQDRVHFVNKT 347 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~~~~~~-l~~~V~~~g~~ 347 (396)
.+++.++. ....+.+.+++.| .++.|.++|+-
T Consensus 183 ai~~~~d~-----~a~g~~~al~~~g~vp~di~vvg~d 215 (272)
T 3o74_A 183 ALVTTSYV-----LLQGVFDTLQARPVDSRQLQLGTFG 215 (272)
T ss_dssp EEEESSHH-----HHHHHHHHHHTSCGGGCCCEEEEES
T ss_pred EEEEeCch-----HHHHHHHHHHHcCCCccceEEEEeC
Confidence 77777532 3445667777777 46778898874
No 102
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.66 E-value=13 Score=32.16 Aligned_cols=67 Identities=12% Similarity=0.067 Sum_probs=39.0
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
+|+|++.. . | ..=..+++.|.++||+|++++..... ...+...++.++...... +. ..++|+
T Consensus 5 ~~~ilVtG---a-G---~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~D~~d-~~-~~~~d~ 66 (286)
T 3ius_A 5 TGTLLSFG---H-G---YTARVLSRALAPQGWRIIGTSRNPDQ---------MEAIRASGAEPLLWPGEE-PS-LDGVTH 66 (286)
T ss_dssp CCEEEEET---C-C---HHHHHHHHHHGGGTCEEEEEESCGGG---------HHHHHHTTEEEEESSSSC-CC-CTTCCE
T ss_pred cCcEEEEC---C-c---HHHHHHHHHHHHCCCEEEEEEcChhh---------hhhHhhCCCeEEEecccc-cc-cCCCCE
Confidence 36787664 1 2 45567788888899999999844221 112223456655443222 22 567898
Q ss_pred EEEcC
Q 016053 154 IVLNT 158 (396)
Q Consensus 154 V~~~~ 158 (396)
|+...
T Consensus 67 vi~~a 71 (286)
T 3ius_A 67 LLIST 71 (286)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 86544
No 103
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=67.60 E-value=4.9 Score=38.38 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++++|+++. ....|.-.-+..|++.|.++||+|++++.
T Consensus 7 ~~~~vl~~p--~p~~GHi~P~l~La~~L~~rG~~VT~v~t 44 (482)
T 2pq6_A 7 RKPHVVMIP--YPVQGHINPLFKLAKLLHLRGFHITFVNT 44 (482)
T ss_dssp -CCEEEEEC--CSSHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEec--CccchhHHHHHHHHHHHHhCCCeEEEEeC
Confidence 345888887 34467779999999999999999999984
No 104
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=67.32 E-value=13 Score=28.87 Aligned_cols=38 Identities=16% Similarity=-0.021 Sum_probs=28.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||+|++-.....---.-....++..|+++||+|+|...
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 57888765544433346788889999999999999984
No 105
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=67.23 E-value=9.7 Score=33.20 Aligned_cols=37 Identities=16% Similarity=-0.011 Sum_probs=28.2
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||||+|......+|.. .....+++.|.+.|++|.++-
T Consensus 3 mkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~d 40 (273)
T 1d4a_A 3 RRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESD 40 (273)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 5899998665555544 666667788888999999987
No 106
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=67.14 E-value=9.4 Score=34.12 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=44.3
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc----hhhhhhhhhhhhhcceEEEEcCchh-----h
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQE-----T 144 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 144 (396)
+|||+|+... .+.....++|.+.||+|..+....+... .....++.+.....|++++.....+ .
T Consensus 2 ~mrivf~Gtp-------~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 74 (314)
T 3tqq_A 2 SLKIVFAGTP-------QFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQE 74 (314)
T ss_dssp CCEEEEEECS-------GGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHH
T ss_pred CcEEEEECCC-------HHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHH
Confidence 4689988742 2333445667778999876653222111 1112334556667788887543321 2
Q ss_pred hhhccCCcEEEEcC
Q 016053 145 INTALKADLIVLNT 158 (396)
Q Consensus 145 ~~~~~~~DiV~~~~ 158 (396)
.....++|++++-.
T Consensus 75 ~l~~~~~Dliv~~~ 88 (314)
T 3tqq_A 75 KLIAMNADVMVVVA 88 (314)
T ss_dssp HHHTTCCSEEEEES
T ss_pred HHHhcCCCEEEEcC
Confidence 34568999998765
No 107
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=66.69 E-value=8 Score=33.23 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=27.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.+|++++...+.|| --.-.++.|.+.|++|+|+...
T Consensus 59 ~~v~VlcG~GNNGG---DGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGG---DGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHH---HHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHH---HHHHHHHHHHHCCCeEEEEEcC
Confidence 37888887655555 3356688899999999998744
No 108
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=66.23 E-value=16 Score=30.73 Aligned_cols=37 Identities=19% Similarity=0.056 Sum_probs=24.5
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEecc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQ 113 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~ 113 (396)
.|++|+|++ + ||....=..+++.|.+.| ++|.++...
T Consensus 20 ~~~mk~vlV-t-----GatG~iG~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 20 QGHMKNVLI-L-----GAGGQIARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp --CCEEEEE-E-----TTTSHHHHHHHHHHTTCTTEEEEEEESS
T ss_pred cCcccEEEE-E-----eCCcHHHHHHHHHHHhCCCceEEEEEcC
Confidence 445556654 4 333456677889999999 999988743
No 109
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=66.21 E-value=7.3 Score=32.46 Aligned_cols=40 Identities=15% Similarity=-0.011 Sum_probs=27.8
Q ss_pred ccccEEEEEeccCCCCChHHH--HHHHHHHHHhCCCEEEEEeccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLL--LMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~--~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
++.|||++..+ ||+..+ ..++++.|++.|++|.++.....
T Consensus 3 l~~k~IllgiT----Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 3 LKGKRIGFGFT----GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp CTTCEEEEEEC----SCGGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCCEEEEEEE----ChHHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 34467776654 333344 78999999999999999985543
No 110
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=65.89 E-value=12 Score=32.55 Aligned_cols=43 Identities=12% Similarity=-0.032 Sum_probs=34.8
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++.+++..+|++|.-+. .+..--.+..++..|+|+|...+|-
T Consensus 65 ~dl~~ll~~~DVVIDfT~--p~a~~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTL--PEGTLVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp CCHHHHHHHCSEEEECSC--HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCHHHHhcCCCEEEEcCC--HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 678889999999998777 5655556678899999999977763
No 111
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=65.88 E-value=73 Score=28.32 Aligned_cols=216 Identities=12% Similarity=0.001 Sum_probs=100.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+.+.|.++.+.....-....+..+.+.+.+.||++.+....... ..... .. ......++|
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~---------~~~~~----------~~-~~l~~~~vd 128 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSP---------EREEQ----------LV-ETMLRRRPE 128 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTTCH---------HHHHH----------HH-HHHHHTCCS
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCh---------HHHHH----------HH-HHHHhCCCC
Confidence 34579888876443323466777778888899999887643221 10000 00 111235788
Q ss_pred EEEEcCc-hhhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCC
Q 016053 153 LIVLNTA-VAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPD 231 (396)
Q Consensus 153 iV~~~~~-~~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k 231 (396)
.|++... .....+..+...++| ++...... .. .....+..+.........+.+.+ .| ..+
T Consensus 129 GiI~~~~~~~~~~~~~l~~~~iP-----vV~i~~~~----~~-------~~~~~V~~D~~~~~~~a~~~L~~-~G--~r~ 189 (355)
T 3e3m_A 129 AMVLSYDGHTEQTIRLLQRASIP-----IVEIWEKP----AH-------PIGHTVGFSNERAAYDMTNALLA-RG--FRK 189 (355)
T ss_dssp EEEEECSCCCHHHHHHHHHCCSC-----EEEESSCC----SS-------CSSEEEECCHHHHHHHHHHHHHH-TT--CCS
T ss_pred EEEEeCCCCCHHHHHHHHhCCCC-----EEEECCcc----CC-------CCCCEEEeChHHHHHHHHHHHHH-CC--CCe
Confidence 7776542 222334455566766 33221111 00 01111222222222333333332 23 356
Q ss_pred EEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEE
Q 016053 232 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 311 (396)
Q Consensus 232 ~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l 311 (396)
+.+|....+..... ..+..--.+.-++.|++.+.......+... .+...+++.++.+. +++...
T Consensus 190 I~~i~~~~~~~~~~-----~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~-------~~~~~a 253 (355)
T 3e3m_A 190 IVFLGEKDDDWTRG-----AARRAGFKRAMREAGLNPDQEIRLGAPPLS----IEDGVAAAELILQE-------YPDTDC 253 (355)
T ss_dssp EEEEEESSCTTSHH-----HHHHHHHHHHHHHTTSCSCCEEEESCSSCC----HHHHHHHHHHHHHH-------CTTCCE
T ss_pred EEEEccCcccChhH-----HHHHHHHHHHHHHCCcCCCccEEEecCCCC----HHHHHHHHHHHHcC-------CCCCcE
Confidence 77776433221100 001111123344567755543333223332 33444455554432 256667
Q ss_pred EEEecCCCccchHHHHHHHHHHhcCC--CCcEEEecCcC
Q 016053 312 VIIGSDMNAQTKFESELRNYVMQKKI--QDRVHFVNKTL 348 (396)
Q Consensus 312 ~ivG~g~~~~~~~~~~l~~~~~~~~l--~~~V~~~g~~~ 348 (396)
+++.++. .--.+.+.+++.|+ ++.|.++|+-+
T Consensus 254 i~~~nD~-----~A~g~~~al~~~G~~vP~disvigfD~ 287 (355)
T 3e3m_A 254 IFCVSDM-----PAFGLLSRLKSIGVAVPEQVSVVGFGN 287 (355)
T ss_dssp EEESSHH-----HHHHHHHHHHHHTCCTTTTCEEECSSC
T ss_pred EEECChH-----HHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 7777532 23345556666665 48899999853
No 112
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=65.71 E-value=14 Score=28.02 Aligned_cols=38 Identities=11% Similarity=-0.088 Sum_probs=28.8
Q ss_pred cEEEEEeccCCCCCh-HHHHHHHHHHHHhCCCEE-EEEec
Q 016053 75 KLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKV-NWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V-~vi~~ 112 (396)
||++++....+.|.. .....+++.++.+.||+| .|+..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 367777766555433 378899999999999999 88873
No 113
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.33 E-value=22 Score=29.86 Aligned_cols=72 Identities=18% Similarity=0.153 Sum_probs=43.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++.++||++. || ......++.|.+.|.+|+|+.+.... . +.......++.++.-... -....++
T Consensus 29 L~gk~VLVVG-----gG--~va~~ka~~Ll~~GA~VtVvap~~~~---~----l~~l~~~~~i~~i~~~~~--~~dL~~a 92 (223)
T 3dfz_A 29 LKGRSVLVVG-----GG--TIATRRIKGFLQEGAAITVVAPTVSA---E----INEWEAKGQLRVKRKKVG--EEDLLNV 92 (223)
T ss_dssp CTTCCEEEEC-----CS--HHHHHHHHHHGGGCCCEEEECSSCCH---H----HHHHHHTTSCEEECSCCC--GGGSSSC
T ss_pred cCCCEEEEEC-----CC--HHHHHHHHHHHHCCCEEEEECCCCCH---H----HHHHHHcCCcEEEECCCC--HhHhCCC
Confidence 3456788775 33 67777888899999999999854221 1 222223334555432221 1223579
Q ss_pred cEEEEcCc
Q 016053 152 DLIVLNTA 159 (396)
Q Consensus 152 DiV~~~~~ 159 (396)
|+|++.+.
T Consensus 93 dLVIaAT~ 100 (223)
T 3dfz_A 93 FFIVVATN 100 (223)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998874
No 114
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=65.20 E-value=26 Score=32.12 Aligned_cols=69 Identities=17% Similarity=0.151 Sum_probs=48.7
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.+++++.+ + ..++.++++. .|+++..+. ...-.-.+.+|+..|++
T Consensus 26 ~~~~l~av~d~------~~~~~~~~a~~~g~~--~-----~~~~~ell~~~~vD~V~i~tp--~~~H~~~~~~al~aGk~ 90 (387)
T 3moi_A 26 PDAQIVAACDP------NEDVRERFGKEYGIP--V-----FATLAEMMQHVQMDAVYIASP--HQFHCEHVVQASEQGLH 90 (387)
T ss_dssp TTEEEEEEECS------CHHHHHHHHHHHTCC--E-----ESSHHHHHHHSCCSEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCeEEEEEEeC------CHHHHHHHHHHcCCC--e-----ECCHHHHHcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCc
Confidence 67888766553 345566677777653 1 3678888886 899988777 55445567899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-.-
T Consensus 91 Vl~EKP 96 (387)
T 3moi_A 91 IIVEKP 96 (387)
T ss_dssp EEECSC
T ss_pred eeeeCC
Confidence 997543
No 115
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=65.11 E-value=65 Score=27.48 Aligned_cols=215 Identities=12% Similarity=0.004 Sum_probs=102.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+.++|.++.+.....-.......+.+++.+.|+++.++..... ...... ....+ ...++|
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~~----------~~~~l-~~~~vd 66 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS---------RISERE----------QILEF-VHLKVD 66 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC---------HHHHHH----------HHHHH-HHTTCS
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC---------HHHHHH----------HHHHH-HHcCCC
Confidence 3458999887643322235666677788889999998874422 111000 01111 235788
Q ss_pred EEEEcCchhh---HHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhh-ccc
Q 016053 153 LIVLNTAVAG---KWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERL-RIK 228 (396)
Q Consensus 153 iV~~~~~~~~---~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-g~~ 228 (396)
.|++...... ..+..+...++| ++......... .....+..+.........+.+.++. |..
T Consensus 67 giI~~~~~~~~~~~~~~~~~~~~iP-----vV~~~~~~~~~----------~~~~~V~~D~~~~g~~~~~~l~~~~~g~~ 131 (293)
T 3l6u_A 67 AIFITTLDDVYIGSAIEEAKKAGIP-----VFAIDRMIRSD----------AVVSSITSNNQMIGEQLASYIKNELIKQT 131 (293)
T ss_dssp EEEEECSCTTTTHHHHHHHHHTTCC-----EEEESSCCCCT----------TCSEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCChHHHHHHHHHHHHcCCC-----EEEecCCCCCC----------cceeEEecCHHHHHHHHHHHHHHHhccCC
Confidence 8877543221 344555666766 34322221100 0122223333333333344444333 322
Q ss_pred ---CCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccC
Q 016053 229 ---MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLE 305 (396)
Q Consensus 229 ---~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~ 305 (396)
..++.++....+.... ..-..-+++.+.-.+ ...+... ....-..+...+++..+.+ +
T Consensus 132 ~~~~~~i~~i~g~~~~~~~---------~~R~~gf~~~l~~~~-g~~~~~~--~~~~~~~~~~~~~~~~~l~-------~ 192 (293)
T 3l6u_A 132 GRSTGRIVEITGTANVYTT---------NERHRGFLKGIENEP-TLSIVDS--VSGNYDPVTSERVMRQVID-------S 192 (293)
T ss_dssp SCSCEEEEEEECSTTCHHH---------HHHHHHHHHHHTTCT-TEEEEEE--EECTTCHHHHHHHHHHHHH-------T
T ss_pred CCCCceEEEEECCCCCchH---------HHHHHHHHHHHHhCC-CcEEeee--ccCCCCHHHHHHHHHHHHH-------h
Confidence 1256666532221110 111233344433211 2222211 1222344555555555543 2
Q ss_pred CCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 306 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 306 ~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
+++...+++..+. ....+.+.+++.|+. .|.++|+-
T Consensus 193 ~~~~~ai~~~~d~-----~a~g~~~al~~~g~~-di~vig~d 228 (293)
T 3l6u_A 193 GIPFDAVYCHNDD-----IAMGVLEALKKAKIS-GKIVVGID 228 (293)
T ss_dssp TCCCSEEEESSHH-----HHHHHHHHHHHTTCC-CCEEEEEE
T ss_pred CCCCCEEEECCch-----HHHHHHHHHHhCCCC-CeEEEEec
Confidence 3677777777642 344567778888987 78888875
No 116
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=64.74 E-value=68 Score=27.58 Aligned_cols=227 Identities=7% Similarity=-0.039 Sum_probs=107.5
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+.++|.++.+.....-....+..+.+++.+.|+++.++...... ...... ....+ ...++|
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~--------~~~~~~----------~i~~l-~~~~vd 63 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYD--------IQEQIT----------VLEQA-IAKNPA 63 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSC--------HHHHHH----------HHHHH-HHHCCS
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCC--------HHHHHH----------HHHHH-HHhCCC
Confidence 34689988876544333466777778888899999986532221 111000 01111 235789
Q ss_pred EEEEcCchh---hHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccC
Q 016053 153 LIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM 229 (396)
Q Consensus 153 iV~~~~~~~---~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~ 229 (396)
.|++..... ...+..+...++| ++......... .....+..+.........+.+.+.++ ..
T Consensus 64 giIi~~~~~~~~~~~~~~~~~~~iP-----vV~~~~~~~~~----------~~~~~V~~d~~~~g~~~~~~l~~~~~-g~ 127 (305)
T 3g1w_A 64 GIAISAIDPVELTDTINKAVDAGIP-----IVLFDSGAPDS----------HAHSFLGTNNYNAGMNAAYKMAELLD-GE 127 (305)
T ss_dssp EEEECCSSTTTTHHHHHHHHHTTCC-----EEEESSCCTTS----------CCSCEEECCHHHHHHHHHHHHHHHTT-TC
T ss_pred EEEEcCCCHHHHHHHHHHHHHCCCc-----EEEECCCCCCC----------ceeEEECcCHHHHHHHHHHHHHHHhC-CC
Confidence 888765322 2344555666766 34322211100 01222233333333333444443321 22
Q ss_pred CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 230 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
.++.++. |.+.. . . ..+..--.+.-++.+.+.+ ....+.+.. ..+...+++..+.+ ++++.
T Consensus 128 ~~i~~i~-~~~~~-~--~---~~R~~gf~~~l~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~l~-------~~~~~ 188 (305)
T 3g1w_A 128 GEVAVIT-LPNQL-N--H---QERTTGFKETLEAEFPAIE-VIAVEDGRG----DSLHSRRVAHQLLE-------DYPNL 188 (305)
T ss_dssp EEEEEEE-CTTCH-H--H---HHHHHHHHHHHHHHCTTEE-EEEEEECTT----CHHHHHHHHHHHHH-------HCTTE
T ss_pred cEEEEEe-CCCcc-c--H---HHHHHHHHHHHHhhCCCCE-EEEEecCCC----CHHHHHHHHHHHHH-------hCCCc
Confidence 4566665 32211 0 0 0111111122223343222 222233443 33444455554433 23788
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC--HHHHHHHcC
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT--VAPYLAAID 358 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~--~~~~~~~aD 358 (396)
..+++.++. ....+.+.+++.|+.+.|.++|+-.. ....+..-.
T Consensus 189 ~ai~~~~d~-----~a~g~~~al~~~g~~~di~vig~d~~~~~~~~~~~~~ 234 (305)
T 3g1w_A 189 AGIFATEAN-----GGVGVGDAVRLESRAGEIQIISFDTDKGTLDLVDEGI 234 (305)
T ss_dssp EEEEESSHH-----HHHHHHHHHHHTTCTTTSEEEEESCCHHHHHHHHTTS
T ss_pred eEEEECCCc-----chhhHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHcCc
Confidence 888887642 34456677788888778888887532 244454433
No 117
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=64.74 E-value=9.8 Score=29.36 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=28.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|||+++... ..|..+.....+++.|.+.|++|.++..
T Consensus 2 ~ki~I~y~S-~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 38 (148)
T 3f6r_A 2 SKVLIVFGS-STGNTESIAQKLEELIAAGGHEVTLLNA 38 (148)
T ss_dssp CEEEEEEEC-SSSHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CeEEEEEEC-CCchHHHHHHHHHHHHHhCCCeEEEEeh
Confidence 477777643 2355568999999999999999998863
No 118
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=64.73 E-value=23 Score=31.63 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=49.6
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--hh---hh
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--ET---IN 146 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~ 146 (396)
|++|+|++.. |....=..+++.|.+.|++|.+++......... ......+...++.++..... .. ..
T Consensus 8 M~~~~IlVtG------atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~ 79 (346)
T 3i6i_A 8 SPKGRVLIAG------ATGFIGQFVATASLDAHRPTYILARPGPRSPSK--AKIFKALEDKGAIIVYGLINEQEAMEKIL 79 (346)
T ss_dssp ---CCEEEEC------TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH--HHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred CCCCeEEEEC------CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhH--HHHHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence 5556787665 323455677888888999999998543211111 11112233456777654432 22 22
Q ss_pred hccCCcEEEEcCch-----hhHHHHHHHhcC-CCc
Q 016053 147 TALKADLIVLNTAV-----AGKWLDAVLKED-VPR 175 (396)
Q Consensus 147 ~~~~~DiV~~~~~~-----~~~~~~~~~~~~-~~~ 175 (396)
...++|+|+..... ....+..+...+ ++.
T Consensus 80 ~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~ 114 (346)
T 3i6i_A 80 KEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKR 114 (346)
T ss_dssp HHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSE
T ss_pred hhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceE
Confidence 22389999766532 122444455555 543
No 119
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=64.37 E-value=13 Score=33.56 Aligned_cols=75 Identities=17% Similarity=0.115 Sum_probs=40.6
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---hh
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---ET 144 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 144 (396)
...|++|+||+.. |....=..+++.|.++ ||+|+++...... ........++.++..... ..
T Consensus 19 ~~~m~~~~vlVtG------atG~iG~~l~~~L~~~~g~~V~~~~r~~~~--------~~~~~~~~~v~~~~~Dl~~d~~~ 84 (372)
T 3slg_A 19 PGSMKAKKVLILG------VNGFIGHHLSKRILETTDWEVFGMDMQTDR--------LGDLVKHERMHFFEGDITINKEW 84 (372)
T ss_dssp ----CCCEEEEES------CSSHHHHHHHHHHHHHSSCEEEEEESCCTT--------TGGGGGSTTEEEEECCTTTCHHH
T ss_pred CcccCCCEEEEEC------CCChHHHHHHHHHHhCCCCEEEEEeCChhh--------hhhhccCCCeEEEeCccCCCHHH
Confidence 4456677887654 3335556778888887 9999999854322 122222245666554332 12
Q ss_pred hh-hccCCcEEEEc
Q 016053 145 IN-TALKADLIVLN 157 (396)
Q Consensus 145 ~~-~~~~~DiV~~~ 157 (396)
+. ...++|+|+..
T Consensus 85 ~~~~~~~~d~Vih~ 98 (372)
T 3slg_A 85 VEYHVKKCDVILPL 98 (372)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHhccCCEEEEc
Confidence 22 12478988643
No 120
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=64.35 E-value=20 Score=28.41 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=24.9
Q ss_pred HHHHHHcCEEEecC---CC--CCCCccHHHHHHHhcCCCEEEcCC
Q 016053 351 APYLAAIDVLVQNS---QA--WGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 351 ~~~~~~aDv~v~pS---~~--~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
...+..||++|.-- +. -..|-..-+-=|.|.|+|||+-..
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~~ 106 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTS 106 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEEc
Confidence 57899999987541 11 022222334447899999999543
No 121
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=64.30 E-value=13 Score=28.68 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=29.4
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEE-EEEe
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKV-NWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V-~vi~ 111 (396)
||++++....+.|... +...+++.++.+.|++| .|+.
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf 51 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFF 51 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEE
Confidence 4788888766664433 78899999999999999 8877
No 122
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=64.18 E-value=29 Score=30.88 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=24.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.|++|+||+.. |....=..+++.|.++|++|.++...
T Consensus 24 ~~~~~~vlVtG------atG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 24 EKDRKRILITG------GAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ---CCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEEc------CccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45556777553 33356677888888999999998743
No 123
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=63.93 E-value=11 Score=33.61 Aligned_cols=79 Identities=16% Similarity=0.057 Sum_probs=45.5
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc----hhhhhhhhhhhhhcceEEEEcCchh-----
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQE----- 143 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----- 143 (396)
+||||+|.... .+.....++|.+.||+|..+....+... .....++.+.....|++++.....+
T Consensus 3 ~mmrIvf~Gtp-------~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~ 75 (317)
T 3rfo_A 3 AMIKVVFMGTP-------DFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEY 75 (317)
T ss_dssp TTSEEEEECCS-------TTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHH
T ss_pred CceEEEEEeCC-------HHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHH
Confidence 44799988642 2333445666677899986664322211 1112234556667788887543321
Q ss_pred hhhhccCCcEEEEcC
Q 016053 144 TINTALKADLIVLNT 158 (396)
Q Consensus 144 ~~~~~~~~DiV~~~~ 158 (396)
......++|++++-.
T Consensus 76 ~~l~~~~~Dliv~~~ 90 (317)
T 3rfo_A 76 EKVLALEPDLIVTAA 90 (317)
T ss_dssp HHHHHHCCSEEEESS
T ss_pred HHHHhcCCCEEEEcC
Confidence 223457899998875
No 124
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=63.83 E-value=12 Score=31.89 Aligned_cols=43 Identities=19% Similarity=0.164 Sum_probs=29.2
Q ss_pred cccEEEEEeccCC--------CCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 73 KSKLVLLVSHELS--------LSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 73 ~~~kIl~v~~~~~--------~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
.|+|||++..... ..|.+ .-+......|.+.|++|++++..+.
T Consensus 2 ~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~ 53 (243)
T 1rw7_A 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK 53 (243)
T ss_dssp CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4468999986421 13444 4555566778889999999996543
No 125
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=63.41 E-value=41 Score=29.89 Aligned_cols=68 Identities=10% Similarity=0.072 Sum_probs=48.5
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+- ..+..++.+++++.+ .++..+++. .+|+++..+. ...-.-.+.+|+..|++
T Consensus 26 ~~~~l~av~d~------~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~ 89 (331)
T 4hkt_A 26 ADARLVAVADA------FPAAAEAIAGAYGCE--------VRTIDAIEAAADIDAVVICTP--TDTHADLIERFARAGKA 89 (331)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHHTTCE--------ECCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEECC------CHHHHHHHHHHhCCC--------cCCHHHHhcCCCCCEEEEeCC--chhHHHHHHHHHHcCCc
Confidence 68888755543 345567777776643 357888888 7899888776 55555667899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-..
T Consensus 90 v~~EKP 95 (331)
T 4hkt_A 90 IFCEKP 95 (331)
T ss_dssp EEECSC
T ss_pred EEEecC
Confidence 997543
No 126
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=63.21 E-value=33 Score=31.13 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=47.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
.+..+|+++... .++...++.++...|.+|+++++.+-...........+.....|..+....... .-.+.
T Consensus 151 l~glkva~vGD~------~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~---av~~a 221 (355)
T 4a8p_A 151 LEDCKVVFVGDA------TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 221 (355)
T ss_dssp GGGCEEEEESCC------CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC------chhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH---HHcCC
Confidence 345689988742 589999999999999999999976544333222222222233454443222222 23578
Q ss_pred cEEEEc
Q 016053 152 DLIVLN 157 (396)
Q Consensus 152 DiV~~~ 157 (396)
|+|+..
T Consensus 222 DVVytd 227 (355)
T 4a8p_A 222 DFLYTD 227 (355)
T ss_dssp SEEEEC
T ss_pred CEEEec
Confidence 888873
No 127
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=63.16 E-value=32 Score=30.95 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=46.9
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
.+..||+++... .+....++.++...|.+|+++++.+-...........+.....|..+....... ...+.
T Consensus 173 l~glkva~vGD~------~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~---av~~a 243 (339)
T 4a8t_A 173 LEDCKVVFVGDA------TQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 243 (339)
T ss_dssp GGGCEEEEESSC------CHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC------chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh---HHcCC
Confidence 345689988742 589999999999999999999976544333222222222233454443222222 23577
Q ss_pred cEEEEc
Q 016053 152 DLIVLN 157 (396)
Q Consensus 152 DiV~~~ 157 (396)
|+|+..
T Consensus 244 Dvvytd 249 (339)
T 4a8t_A 244 DFLYTD 249 (339)
T ss_dssp SEEEEC
T ss_pred CEEEec
Confidence 888873
No 128
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=62.99 E-value=52 Score=29.30 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=58.1
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
.+...|+++|-= . =| ...++++.. +.++++++.+-+. ..+..++.+++++.. .+ .
T Consensus 6 ~~~~~v~iiG~G-~-ig-~~~~~~l~~----------~~~~~~~vav~d~------~~~~~~~~a~~~g~~-~~-----~ 60 (346)
T 3cea_A 6 RKPLRAAIIGLG-R-LG-ERHARHLVN----------KIQGVKLVAACAL------DSNQLEWAKNELGVE-TT-----Y 60 (346)
T ss_dssp CCCEEEEEECCS-T-TH-HHHHHHHHH----------TCSSEEEEEEECS------CHHHHHHHHHTTCCS-EE-----E
T ss_pred CCcceEEEEcCC-H-HH-HHHHHHHHh----------cCCCcEEEEEecC------CHHHHHHHHHHhCCC-cc-----c
Confidence 455778888751 1 12 223333331 1267887766553 345566667766643 11 2
Q ss_pred CCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 348 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 348 ~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+++.+++. .+|+++..+. ...-.-.+.+|+..|++|++-.
T Consensus 61 ~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~~eK 102 (346)
T 3cea_A 61 TNYKDMIDTENIDAIFIVAP--TPFHPEMTIYAMNAGLNVFCEK 102 (346)
T ss_dssp SCHHHHHTTSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHHhcCCCCCEEEEeCC--hHhHHHHHHHHHHCCCEEEEcC
Confidence 56788887 5899888776 4544555678999999999743
No 129
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=62.36 E-value=7.6 Score=32.36 Aligned_cols=39 Identities=23% Similarity=0.125 Sum_probs=25.7
Q ss_pred ccccEEEEEeccCCCCCh-HHHHHHHHHHHHh-CCCEEEEEeccC
Q 016053 72 MKSKLVLLVSHELSLSGG-PLLLMELAFLLRG-VGTKVNWITIQK 114 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~-~G~~V~vi~~~~ 114 (396)
++++||++... ||. .....++++.|++ .|++|.++....
T Consensus 17 l~~k~IllgvT----Gsiaa~k~~~lv~~L~~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 17 ERKFHVLVGVT----GSVAALKLPLLVSKLLDIPGLEVAVVTTER 57 (206)
T ss_dssp CSSEEEEEEEC----SSGGGGTHHHHHHHHC---CEEEEEEECTG
T ss_pred cCCCEEEEEEe----ChHHHHHHHHHHHHHhcccCCEEEEEECHh
Confidence 44567776653 222 2556899999998 899999998543
No 130
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=62.27 E-value=11 Score=33.19 Aligned_cols=43 Identities=9% Similarity=-0.120 Sum_probs=33.4
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
+++.+++..+|++|--+. .+..--.+..++..|+|+|...+|-
T Consensus 80 ~dl~~ll~~aDVvIDFT~--p~a~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ--PQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp SCHHHHTTSCSEEEECSC--HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCHHHHhcCCCEEEEcCC--HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 578888899999997666 5554444567899999999977763
No 131
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=62.11 E-value=18 Score=28.66 Aligned_cols=87 Identities=9% Similarity=-0.075 Sum_probs=43.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHH-hCCCE-EEEEeccCCC-C-chhhhhhhhhhhhhcceEEEEcCchhhhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLR-GVGTK-VNWITIQKPS-E-EDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~-~~G~~-V~vi~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
.|+|++||||+....- -......+.+.+. +.|.. +.+.+..... . -.+........+...|+++-.. ..+.+.
T Consensus 3 ~~~m~~vLFVC~gN~c--RSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~-~ar~l~ 79 (158)
T 3rof_A 3 FQGMVDVAFVCLGNIC--RSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGM-ISELFE 79 (158)
T ss_dssp CCSCEEEEEEESSSSS--HHHHHHHHHHHHHHHTTCCSEEEEEEETTCCSTTCCCCHHHHHHHHHTTCCCTTC-CCCBCC
T ss_pred CCCCCEEEEEeCCchh--HHHHHHHHHHHHHHHcCCCCeEEEecccCCcccCCCCCHHHHHHHHHcCCCcCCC-cceECC
Confidence 3556799999964322 2355555665554 34432 6666632211 1 1112222333455567665211 122222
Q ss_pred hccCCcEEEEcCch
Q 016053 147 TALKADLIVLNTAV 160 (396)
Q Consensus 147 ~~~~~DiV~~~~~~ 160 (396)
....+|+|++-+..
T Consensus 80 ~~~~~DlIi~Md~~ 93 (158)
T 3rof_A 80 ATDDFDYIVAMDQS 93 (158)
T ss_dssp TTCCCSEEEESSHH
T ss_pred hhhcCCEEEEcCHH
Confidence 22289999987643
No 132
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=62.09 E-value=21 Score=31.85 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=54.9
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT 349 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~ 349 (396)
...++++|-=.- | ..+++++... ++++++-+-+.. .+..++.+++++.+. ...+
T Consensus 5 ~~rigiiG~G~i--g-~~~~~~l~~~-----------~~~~~~av~d~~------~~~~~~~a~~~~~~~------~~~~ 58 (329)
T 3evn_A 5 KVRYGVVSTAKV--A-PRFIEGVRLA-----------GNGEVVAVSSRT------LESAQAFANKYHLPK------AYDK 58 (329)
T ss_dssp CEEEEEEBCCTT--H-HHHHHHHHHH-----------CSEEEEEEECSC------SSTTCC---CCCCSC------EESC
T ss_pred ceEEEEEechHH--H-HHHHHHHHhC-----------CCcEEEEEEcCC------HHHHHHHHHHcCCCc------ccCC
Confidence 356777775211 1 2345555432 677777555432 122334455555431 1267
Q ss_pred HHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 350 VAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 350 ~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
..+++. ..|+++..+. ...-.-.+.+|+..|++|++-.-
T Consensus 59 ~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~Vl~EKP 99 (329)
T 3evn_A 59 LEDMLADESIDVIYVATI--NQDHYKVAKAALLAGKHVLVEKP 99 (329)
T ss_dssp HHHHHTCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHCCCeEEEccC
Confidence 888888 7899888776 55555567899999999997543
No 133
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=62.03 E-value=15 Score=32.98 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=31.9
Q ss_pred cccccEEEEEeccCCCCC-hHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 71 FMKSKLVLLVSHELSLSG-GPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG-~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
.|+|++++++.+..+.+| +.+...++...|++.|+++.+.....
T Consensus 21 ~m~m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~ 65 (337)
T 2qv7_A 21 HMMRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK 65 (337)
T ss_dssp CSCCEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS
T ss_pred ccccceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC
Confidence 344567888876554433 44777889999999999999887543
No 134
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=61.76 E-value=20 Score=30.68 Aligned_cols=36 Identities=22% Similarity=0.168 Sum_probs=26.1
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+.. |.. .-+..|.++|++.| +|+|+.+...
T Consensus 1 M~ILlTNDD----Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (247)
T 1j9j_A 1 MRILVTNDD----GIQSKGIIVLAELLSEEH-EVFVVAPDKE 37 (247)
T ss_dssp CEEEEECSS----CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CeEEEEcCC----CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 478876653 332 66888889999888 9999996543
No 135
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=61.69 E-value=11 Score=29.76 Aligned_cols=86 Identities=15% Similarity=0.005 Sum_probs=43.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCC--EEEEEeccCCC-C-chhhhhhhhhhhhhcceEEEEcCchhhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGT--KVNWITIQKPS-E-EDEVIYSLEHKMWDRGVQVISAKGQETI 145 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~--~V~vi~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
.|++++||||+....- -......+.+.+.. .|. ++.+.+..... . -.+........+...|+++ .. ..+.+
T Consensus 2 ~~~~~~vLFVC~gN~c--RSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~-~ar~l 77 (157)
T 3n8i_A 2 EQATKSVLFVCLGNIC--RSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SH-VARQI 77 (157)
T ss_dssp --CCEEEEEEESSSSS--HHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CC-CCCBC
T ss_pred CCCCCEEEEECCCchh--HHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CC-ceeEC
Confidence 4667899999964332 23455555555543 554 36666632211 0 1111222334456677775 32 22333
Q ss_pred h--hccCCcEEEEcCch
Q 016053 146 N--TALKADLIVLNTAV 160 (396)
Q Consensus 146 ~--~~~~~DiV~~~~~~ 160 (396)
. ....+|+|++-+..
T Consensus 78 ~~~~~~~~DlIi~M~~~ 94 (157)
T 3n8i_A 78 TKEDFATFDYILCMDES 94 (157)
T ss_dssp CHHHHHHCSEEEESSHH
T ss_pred CHHHcCCCCEEEEeCcH
Confidence 2 23578999987643
No 136
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=61.67 E-value=14 Score=33.24 Aligned_cols=34 Identities=21% Similarity=0.040 Sum_probs=22.7
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||++|||+++.. | ..=..++..|.+.|++|+++.
T Consensus 1 mm~~mki~iiG~-----G--~~G~~~a~~L~~~g~~V~~~~ 34 (359)
T 1bg6_A 1 MIESKTYAVLGL-----G--NGGHAFAAYLALKGQSVLAWD 34 (359)
T ss_dssp ---CCEEEEECC-----S--HHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCcCeEEEECC-----C--HHHHHHHHHHHhCCCEEEEEe
Confidence 356679998862 3 344456778888999998875
No 137
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=61.59 E-value=29 Score=31.78 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=25.3
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||+++|||++.. |. ....+++++++.|+++.++..
T Consensus 4 m~~~~~ilI~g~-----g~--~~~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 4 MYDNKRLLILGA-----GR--GQLGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp --CCCEEEEECC-----CG--GGHHHHHHHHHHTCEEEEEEC
T ss_pred ccCCCEEEEECC-----cH--hHHHHHHHHHHCCCEEEEEcC
Confidence 567789998873 32 245588999999999999963
No 138
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=61.31 E-value=14 Score=27.57 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=30.2
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|++|+....+.|... +-..+++.++...|++|.|+...
T Consensus 2 kk~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 2 KRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 4688888776665433 77789999999999999998833
No 139
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=61.21 E-value=16 Score=33.27 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=61.6
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
+++.|+++|-=.-.+ .-++++..+...+.. .++++++=+-+- ..+..++.+++++.+. + .+
T Consensus 24 kkirvgiIG~G~ig~---~H~~a~~~~~~~~~~----~~~~~lvav~d~------~~~~a~~~a~~~g~~~-~-----y~ 84 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGK---CHALAWNAVKTVFGD----VERPRLVHLAEA------NAGLAEARAGEFGFEK-A-----TA 84 (393)
T ss_dssp CCCEEEEECCSHHHH---HHHHHHTTHHHHHCS----SCCCEEEEEECC--------TTHHHHHHHHTCSE-E-----ES
T ss_pred CCccEEEEcCCHHHH---HHHHHHHhhhhhhcc----CCCcEEEEEECC------CHHHHHHHHHHhCCCe-e-----cC
Confidence 456788887522122 234444444433322 267788766654 3455677788887652 1 26
Q ss_pred CHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEc
Q 016053 349 TVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVL 388 (396)
Q Consensus 349 ~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t 388 (396)
+..++++. .|+++..+. ...-.-.+.+|+..|++|++=
T Consensus 85 d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~E 124 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWCE 124 (393)
T ss_dssp CHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEEc
Confidence 78888875 677877776 454455679999999999874
No 140
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=61.18 E-value=16 Score=26.83 Aligned_cols=76 Identities=7% Similarity=0.045 Sum_probs=44.7
Q ss_pred CEE-EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEec-CcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh--cCC
Q 016053 308 SVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA--FQL 383 (396)
Q Consensus 308 ~~~-l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g-~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma--~G~ 383 (396)
..+ +++++.|.+.+ -.-..+++.+++.|++ +.... ...+..+.+...|++++... =.|-..=++..+ .|+
T Consensus 6 ~mkIlL~C~aGmSTs-llv~km~~~a~~~gi~--v~i~a~~~~~~~~~~~~~DvvLLgPQ---V~y~~~~ik~~~~~~~i 79 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSA-QLANAINEGANLTEVR--VIANSGAYGAHYDIMGVYDLIILAPQ---VRSYYREMKVDAERLGI 79 (108)
T ss_dssp CEEEEEEESSSSHHH-HHHHHHHHHHHHHTCS--EEEEEEETTSCTTTGGGCSEEEECGG---GGGGHHHHHHHHTTTTC
T ss_pred CceEEEECCCCCCHH-HHHHHHHHHHHHCCCc--eEEEEcchHHHHhhccCCCEEEEChH---HHHHHHHHHHHhhhcCC
Confidence 444 45556665332 2567788888888876 44432 22345566678899888654 122233344444 388
Q ss_pred CEEEcC
Q 016053 384 PVLVLS 389 (396)
Q Consensus 384 PVI~t~ 389 (396)
||..-+
T Consensus 80 pV~vI~ 85 (108)
T 3nbm_A 80 QIVATR 85 (108)
T ss_dssp EEEECC
T ss_pred cEEEeC
Confidence 887654
No 141
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=60.99 E-value=17 Score=31.17 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 28 k~vlVT-----Gas~gIG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILIT-----GASQRVGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEES-----STTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456666 344456678889999999999888744
No 142
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=60.80 E-value=10 Score=30.64 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=26.5
Q ss_pred ccEEEEEeccCCCCCh-HHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 74 SKLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
.|||++... ||. .....++++.|++.|++|.++..+.
T Consensus 5 ~k~IllgvT----Gs~aa~k~~~ll~~L~~~g~~V~vv~T~~ 42 (175)
T 3qjg_A 5 GENVLICLC----GSVNSINISHYIIELKSKFDEVNVIASTN 42 (175)
T ss_dssp CCEEEEEEC----SSGGGGGHHHHHHHHTTTCSEEEEEECTG
T ss_pred CCEEEEEEe----CHHHHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 356666553 222 2568899999999999999998543
No 143
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=60.47 E-value=8.7 Score=33.36 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|++|+||+.. . | ..=..+++.|.++|++|+++...
T Consensus 1 M~~~~ilVtG---a-G---~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG---C-G---DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC---C-S---HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC---C-C---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567888663 1 3 35556788888899999999854
No 144
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=60.41 E-value=89 Score=27.48 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=29.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+.+.|.++.+.....-....+..+.+.+.+.||++.++...
T Consensus 61 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 101 (339)
T 3h5o_A 61 KSRTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSH 101 (339)
T ss_dssp --CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44579888876544334567788888899999999887643
No 145
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=60.37 E-value=43 Score=30.20 Aligned_cols=90 Identities=7% Similarity=-0.030 Sum_probs=46.8
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHH-h-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLR-G-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~-~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
...|+++||.+|.. |. .-...+..|. + .|+++..++...+.. ........++..........+.
T Consensus 18 ~~~m~~~rvgiIG~----G~---~g~~~~~~l~~~~~~~~lvav~d~~~~~-------~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 18 YFQGMTLKAGIVGI----GM---IGSDHLRRLANTVSGVEVVAVCDIVAGR-------AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp ----CCEEEEEECC----SH---HHHHHHHHHHHTCTTEEEEEEECSSTTH-------HHHHHHHHTCCCEEESSHHHHH
T ss_pred ccCCCeeeEEEECC----cH---HHHHHHHHHHhhCCCcEEEEEEeCCHHH-------HHHHHHHhCCCCeeeCCHHHHh
Confidence 34667789999983 22 2234566666 3 578888777544321 1111122232112223445555
Q ss_pred hccCCcEEEEcCchhhH--HHHHHHhcC
Q 016053 147 TALKADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 147 ~~~~~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
...++|+|++.+|.... +...+...+
T Consensus 84 ~~~~~D~V~i~tp~~~h~~~~~~al~aG 111 (357)
T 3ec7_A 84 NDKDVEVVIITASNEAHADVAVAALNAN 111 (357)
T ss_dssp HCTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred cCCCCCEEEEcCCcHHHHHHHHHHHHCC
Confidence 66689999988865432 344455555
No 146
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=60.32 E-value=12 Score=30.66 Aligned_cols=38 Identities=16% Similarity=0.040 Sum_probs=28.7
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+|+|++|......+...+.+.+.+..+.+.|+++.++-
T Consensus 2 ~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~id 39 (190)
T 3u7r_A 2 VKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLH 39 (190)
T ss_dssp CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECC
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEe
Confidence 46899888776667766666666666777899999886
No 147
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=60.23 E-value=21 Score=28.26 Aligned_cols=85 Identities=7% Similarity=-0.119 Sum_probs=44.7
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCE---EEEEeccCCC--CchhhhhhhhhhhhhcceEEEEcCchhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTK---VNWITIQKPS--EEDEVIYSLEHKMWDRGVQVISAKGQET 144 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~---V~vi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (396)
.|++++||||+....- -......+.+.+.. .|.+ +.+.+..... .-.+........+...|+++- ...+.
T Consensus 4 ~~~~~~VLFVCtgN~c--RSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s--~~ar~ 79 (161)
T 1d1q_A 4 EKPKISVAFIALGNFC--RSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN--HKGKQ 79 (161)
T ss_dssp CSCCEEEEEEESSSSS--HHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC--CCBCB
T ss_pred CCCCCEEEEEcCCcHH--HHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC--ceEeE
Confidence 3566799999964332 23555555555543 5543 6666633221 111122223345556677654 22233
Q ss_pred hh--hccCCcEEEEcCc
Q 016053 145 IN--TALKADLIVLNTA 159 (396)
Q Consensus 145 ~~--~~~~~DiV~~~~~ 159 (396)
+. ....+|+|++-+.
T Consensus 80 l~~~~~~~~DlIl~M~~ 96 (161)
T 1d1q_A 80 IKTKHFDEYDYIIGMDE 96 (161)
T ss_dssp CCGGGGGTCSEEEESSH
T ss_pred CCHHHHhhCCEEEEeCH
Confidence 32 2357999998764
No 148
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=60.03 E-value=9.9 Score=33.28 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=25.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
||||+ + ||....=..|++.|.++||+|++++.+
T Consensus 1 MkILV-T-----GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV-G-----GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE-E-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE-E-----CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47764 4 444567788899999999999999843
No 149
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=59.98 E-value=20 Score=31.42 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=22.9
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++|||+++.. | ..=..++..|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~-----G--~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGA-----G--AMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECC-----S--HHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECc-----C--HHHHHHHHHHHhCCCcEEEEEC
Confidence 3468998862 3 3445667888889999998853
No 150
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=59.88 E-value=60 Score=29.12 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=59.0
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
.+...|+++|-=.- | ...++++.+. .++++++-+-+. ..+..++.+++++.. ..
T Consensus 11 ~~~~rvgiiG~G~~--g-~~~~~~l~~~----------~~~~~lvav~d~------~~~~~~~~~~~~~~~-------~~ 64 (354)
T 3q2i_A 11 DRKIRFALVGCGRI--A-NNHFGALEKH----------ADRAELIDVCDI------DPAALKAAVERTGAR-------GH 64 (354)
T ss_dssp SSCEEEEEECCSTT--H-HHHHHHHHHT----------TTTEEEEEEECS------SHHHHHHHHHHHCCE-------EE
T ss_pred CCcceEEEEcCcHH--H-HHHHHHHHhC----------CCCeEEEEEEcC------CHHHHHHHHHHcCCc-------ee
Confidence 34577888876211 1 2233444431 157887755543 345666777776631 13
Q ss_pred CCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 348 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 348 ~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++..++++ .+|+++..+. ...-.-.+.+|+..|++|++-.
T Consensus 65 ~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~v~~EK 106 (354)
T 3q2i_A 65 ASLTDMLAQTDADIVILTTP--SGLHPTQSIECSEAGFHVMTEK 106 (354)
T ss_dssp SCHHHHHHHCCCSEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHCCCCEEEeC
Confidence 67888887 6898888776 4444556789999999999754
No 151
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=59.87 E-value=15 Score=28.28 Aligned_cols=39 Identities=8% Similarity=0.094 Sum_probs=30.3
Q ss_pred cEEEEEeccCCCCCh-HHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|++++....+.|.. .+...+++.++...|++|.|+...
T Consensus 6 kk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 6 KKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp CEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred hEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 468888876666543 377889999999999999998843
No 152
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=59.85 E-value=33 Score=27.89 Aligned_cols=76 Identities=18% Similarity=0.178 Sum_probs=42.9
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
||++||+++... |-...-+....+.|+..|++|.+++..+... . ....|+.+..............+
T Consensus 1 mm~~~v~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~-------v---~~~~g~~v~~d~~l~~~~~~~~~ 67 (197)
T 2rk3_A 1 MASKRALVILAK---GAEEMETVIPVDVMRRAGIKVTVAGLAGKDP-------V---QCSRDVVICPDASLEDAKKEGPY 67 (197)
T ss_dssp -CCCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEETTCSSC-------E---ECTTSCEECCSEEHHHHHTTCCC
T ss_pred CCCCEEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEEcCCCCc-------c---ccCCCCEEeCCcCHHHcCCccCC
Confidence 455688888742 2222455666778888999999998553210 1 12234444322222222122679
Q ss_pred cEEEEcCch
Q 016053 152 DLIVLNTAV 160 (396)
Q Consensus 152 DiV~~~~~~ 160 (396)
|+|++....
T Consensus 68 D~livpGG~ 76 (197)
T 2rk3_A 68 DVVVLPGGN 76 (197)
T ss_dssp SEEEECCCH
T ss_pred CEEEECCCc
Confidence 999988753
No 153
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=59.81 E-value=50 Score=27.77 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEecc
Q 016053 91 LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
..=..++++|.++|++|+++...
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 56778899999999999998743
No 154
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=59.81 E-value=81 Score=28.81 Aligned_cols=70 Identities=11% Similarity=-0.049 Sum_probs=48.1
Q ss_pred CCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH-------cCEEEecCCCCCCCccHHHHHH
Q 016053 307 PSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA-------IDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 307 ~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~-------aDv~v~pS~~~~E~fg~~~lEA 378 (396)
++++++- +-+. ..+..++.+++++++.. ....++.++++. .|+++..+. ...-.-.+.+|
T Consensus 38 ~~~~lva~v~d~------~~~~a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~i~tp--~~~H~~~~~~a 105 (398)
T 3dty_A 38 NTFVLVAGAFDI------DPIRGSAFGEQLGVDSE----RCYADYLSMFEQEARRADGIQAVSIATP--NGTHYSITKAA 105 (398)
T ss_dssp GSEEEEEEECCS------SHHHHHHHHHHTTCCGG----GBCSSHHHHHHHHTTCTTCCSEEEEESC--GGGHHHHHHHH
T ss_pred CCeEEEEEEeCC------CHHHHHHHHHHhCCCcc----eeeCCHHHHHhcccccCCCCCEEEECCC--cHHHHHHHHHH
Confidence 5677763 3332 34667778888887520 013688899987 899887766 44445567899
Q ss_pred HhcCCCEEEc
Q 016053 379 MAFQLPVLVL 388 (396)
Q Consensus 379 ma~G~PVI~t 388 (396)
+..|++|++=
T Consensus 106 l~aGkhVl~E 115 (398)
T 3dty_A 106 LEAGLHVVCE 115 (398)
T ss_dssp HHTTCEEEEC
T ss_pred HHCCCeEEEe
Confidence 9999999973
No 155
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=59.80 E-value=13 Score=30.28 Aligned_cols=38 Identities=13% Similarity=-0.051 Sum_probs=28.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~ 113 (396)
|||+++... ..|-.++....+++.+.+ .|++|.++...
T Consensus 2 mkilii~~S-~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS-MYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC-SSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC-CCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 588888754 234445888888999998 89999998743
No 156
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=59.52 E-value=25 Score=30.95 Aligned_cols=68 Identities=12% Similarity=-0.006 Sum_probs=49.1
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
++++++-+-+. ..+..++.+++++.+. .+++.+++..+|+++..+. ...-.-.+.+|+..|++|+
T Consensus 30 ~~~~l~av~d~------~~~~~~~~a~~~~~~~-------~~~~~~ll~~~D~V~i~tp--~~~h~~~~~~al~~gk~vl 94 (308)
T 3uuw_A 30 ERFEFVGAFTP------NKVKREKICSDYRIMP-------FDSIESLAKKCDCIFLHSS--TETHYEIIKILLNLGVHVY 94 (308)
T ss_dssp SSSEEEEEECS------CHHHHHHHHHHHTCCB-------CSCHHHHHTTCSEEEECCC--GGGHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEECC------CHHHHHHHHHHcCCCC-------cCCHHHHHhcCCEEEEeCC--cHhHHHHHHHHHHCCCcEE
Confidence 67888755543 3466677777777541 3577888889999988777 5555556789999999999
Q ss_pred EcC
Q 016053 387 VLS 389 (396)
Q Consensus 387 ~t~ 389 (396)
+-.
T Consensus 95 ~EK 97 (308)
T 3uuw_A 95 VDK 97 (308)
T ss_dssp ECS
T ss_pred EcC
Confidence 754
No 157
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=59.41 E-value=13 Score=31.46 Aligned_cols=38 Identities=21% Similarity=0.004 Sum_probs=29.8
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||||+|......+|.. .....+++.|++.|++|.++--
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 5899998766666544 7777788888888999999873
No 158
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=59.29 E-value=79 Score=29.17 Aligned_cols=71 Identities=7% Similarity=-0.075 Sum_probs=49.0
Q ss_pred CCEEEEE-EecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH-------cCEEEecCCCCCCCccHHHHHH
Q 016053 307 PSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA-------IDVLVQNSQAWGECFGRITIEA 378 (396)
Q Consensus 307 ~~~~l~i-vG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~-------aDv~v~pS~~~~E~fg~~~lEA 378 (396)
++++++- +-+. ..+..++.+++++++.. ....++.++++. .|+++..+. ...-.-.+.+|
T Consensus 63 ~~~~lva~v~d~------~~~~a~~~a~~~g~~~~----~~~~~~~~ll~~~~~~~~~vD~V~I~tp--~~~H~~~~~~a 130 (417)
T 3v5n_A 63 DHYELVAGALSS------TPEKAEASGRELGLDPS----RVYSDFKEMAIREAKLKNGIEAVAIVTP--NHVHYAAAKEF 130 (417)
T ss_dssp SCEEEEEEECCS------SHHHHHHHHHHHTCCGG----GBCSCHHHHHHHHHHCTTCCSEEEECSC--TTSHHHHHHHH
T ss_pred CCcEEEEEEeCC------CHHHHHHHHHHcCCCcc----cccCCHHHHHhcccccCCCCcEEEECCC--cHHHHHHHHHH
Confidence 5677763 4332 34666778888877521 113688899987 899888777 55555567899
Q ss_pred HhcCCCEEEcC
Q 016053 379 MAFQLPVLVLS 389 (396)
Q Consensus 379 ma~G~PVI~t~ 389 (396)
+..|++|++=.
T Consensus 131 l~aGkhVl~EK 141 (417)
T 3v5n_A 131 LKRGIHVICDK 141 (417)
T ss_dssp HTTTCEEEEES
T ss_pred HhCCCeEEEEC
Confidence 99999999743
No 159
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=59.20 E-value=16 Score=26.74 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=27.8
Q ss_pred cEEEEEeccCCCC-ChHHHHHHHHHHHHhC-CC-EEEEEecc
Q 016053 75 KLVLLVSHELSLS-GGPLLLMELAFLLRGV-GT-KVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~g-G~~~~~~~l~~~L~~~-G~-~V~vi~~~ 113 (396)
||++++....+.+ ........++..+.+. |+ +|.++...
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 4677777655443 2336678888888888 99 99998843
No 160
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=59.17 E-value=12 Score=32.20 Aligned_cols=37 Identities=22% Similarity=0.153 Sum_probs=26.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+.+|+ ||..-.=..+++.|.++|++|.+....
T Consensus 23 m~~~k~vlIT-----Gas~gIG~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVT-----GGSRGIGAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEET-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 4445677777 444456678899999999999887543
No 161
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=58.92 E-value=85 Score=26.75 Aligned_cols=213 Identities=11% Similarity=-0.003 Sum_probs=100.2
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|.++.+.....-....+..+.+++.+.|+++.++...... ..... .. ......++|
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~---------~~~~~----------~~-~~l~~~~vd 66 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDI---------VRERE----------AV-GQFFERRVD 66 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCH---------HHHHH----------HH-HHHHHTTCS
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCH---------HHHHH----------HH-HHHHHCCCC
Confidence 44579988876433223366677778888899999988744321 10000 00 112335788
Q ss_pred EEEEcCch-hhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccCCC
Q 016053 153 LIVLNTAV-AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPD 231 (396)
Q Consensus 153 iV~~~~~~-~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~k 231 (396)
.|++.... ....+..+...++| ++........ .....+..+.........+.+.+ .| ..+
T Consensus 67 giIi~~~~~~~~~~~~~~~~~iP-----vV~~~~~~~~-----------~~~~~V~~D~~~~g~~a~~~L~~-~G--~~~ 127 (291)
T 3egc_A 67 GLILAPSEGEHDYLRTELPKTFP-----IVAVNRELRI-----------PGCGAVLSENVRGARTAVEYLIA-RG--HTR 127 (291)
T ss_dssp EEEECCCSSCCHHHHHSSCTTSC-----EEEESSCCCC-----------TTCEEEEECHHHHHHHHHHHHHH-TT--CCS
T ss_pred EEEEeCCCCChHHHHHhhccCCC-----EEEEecccCC-----------CCCCEEEECcHHHHHHHHHHHHH-cC--CCE
Confidence 88776533 23333444445554 4432222110 01222233333333333444432 23 456
Q ss_pred EEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEE
Q 016053 232 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 311 (396)
Q Consensus 232 ~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l 311 (396)
+.++....+.... ..+..--.+.-++.|++.+...+ ..+.....++...+.+.+. +.++...
T Consensus 128 i~~i~~~~~~~~~------~~R~~gf~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~l~-----------~~~~~~a 189 (291)
T 3egc_A 128 IGAIVGSAGLMTS------RERLKGFRAAMSAAGLPVRQEWI-AAGGVRADNGRDGAIKVLT-----------GADRPTA 189 (291)
T ss_dssp EEEECSCTTSHHH------HHHHHHHHHHHHHTTCCCCGGGE-EC------CCHHHHHHHHT-----------C-CCCSE
T ss_pred EEEEeCCCCCcCH------HHHHHHHHHHHHHcCCCCCHHHe-EeCCCChhHHHHHHHHHHh-----------CCCCCcE
Confidence 7777543221111 01111112233445664433222 2355556666554443332 2256677
Q ss_pred EEEecCCCccchHHHHHHHHHHhcCCC--CcEEEecCc
Q 016053 312 VIIGSDMNAQTKFESELRNYVMQKKIQ--DRVHFVNKT 347 (396)
Q Consensus 312 ~ivG~g~~~~~~~~~~l~~~~~~~~l~--~~V~~~g~~ 347 (396)
+++.++. ....+.+.+++.|+. +.|.++|+-
T Consensus 190 i~~~~d~-----~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 190 LLTSSHR-----ITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp EEESSHH-----HHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred EEECCcH-----HHHHHHHHHHHcCCCCCCceEEEEec
Confidence 7777642 334566667777765 789999874
No 162
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=58.69 E-value=42 Score=30.00 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=48.4
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.+++++. .. .+++.+++. .+|+++..+. ...-.-.+.+|+..|++
T Consensus 27 ~~~~l~av~d~------~~~~~~~~a~~~g~----~~---~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~ 91 (344)
T 3euw_A 27 PDLELVVIADP------FIEGAQRLAEANGA----EA---VASPDEVFARDDIDGIVIGSP--TSTHVDLITRAVERGIP 91 (344)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHTTTC----EE---ESSHHHHTTCSCCCEEEECSC--GGGHHHHHHHHHHTTCC
T ss_pred CCcEEEEEECC------CHHHHHHHHHHcCC----ce---eCCHHHHhcCCCCCEEEEeCC--chhhHHHHHHHHHcCCc
Confidence 67887755543 34556677776652 11 267888888 7899888777 55555667899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-.-
T Consensus 92 v~~EKP 97 (344)
T 3euw_A 92 ALCEKP 97 (344)
T ss_dssp EEECSC
T ss_pred EEEECC
Confidence 997553
No 163
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=58.59 E-value=44 Score=29.71 Aligned_cols=78 Identities=19% Similarity=0.141 Sum_probs=47.5
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. | .+....++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|
T Consensus 154 ~gl~va~vGD-----~-~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~e--av~~aD 225 (315)
T 1pvv_A 154 KGVKVVYVGD-----G-NNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVK--AVKDAD 225 (315)
T ss_dssp TTCEEEEESC-----C-CHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHH--HTTTCS
T ss_pred CCcEEEEECC-----C-cchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHH--HhCCCC
Confidence 3468998874 2 5899999999999999999999765443322221122222244544432222221 125789
Q ss_pred EEEEcC
Q 016053 153 LIVLNT 158 (396)
Q Consensus 153 iV~~~~ 158 (396)
+|+...
T Consensus 226 vvy~~~ 231 (315)
T 1pvv_A 226 VIYTDV 231 (315)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 998864
No 164
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=58.30 E-value=17 Score=28.88 Aligned_cols=84 Identities=13% Similarity=-0.074 Sum_probs=42.5
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCC--EEEEEeccCCC-C-chhhhhhhhhhhhhcceEEEEcCchhhhh
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGT--KVNWITIQKPS-E-EDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~--~V~vi~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
|+|++||||+....- -......+.+.+.+ .|. ++.+.+..... . -.+........+...|+++ .. ..+.+.
T Consensus 2 ~~m~~vLFVC~gN~c--RSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~-~ar~l~ 77 (161)
T 3jvi_A 2 PGSMKLLFVCLGNIC--RSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQV-DS-ISRPVV 77 (161)
T ss_dssp --CEEEEEEESSSSS--HHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCC-CC-BCCBCC
T ss_pred CCCcEEEEECCCchh--HHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCC-CC-eeeECC
Confidence 456799999964322 23555555555543 443 46666632221 1 1112222334455677776 32 333333
Q ss_pred h--ccCCcEEEEcCc
Q 016053 147 T--ALKADLIVLNTA 159 (396)
Q Consensus 147 ~--~~~~DiV~~~~~ 159 (396)
. ...+|+|++-+.
T Consensus 78 ~~~~~~~DlIl~Md~ 92 (161)
T 3jvi_A 78 SSDFKNFDYIFAMDN 92 (161)
T ss_dssp HHHHHHCSEEEESSH
T ss_pred HHHhcCCCEEEEeCh
Confidence 2 357899998764
No 165
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=58.07 E-value=45 Score=30.79 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=52.0
Q ss_pred cccEEEEEeccCC-CCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~~~-~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
+.++|+++..... .|-+.++...++.++...|.+|+++++.+-...........+.....|..+........ .-.+.
T Consensus 190 ~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~e--av~~a 267 (399)
T 3q98_A 190 KGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEE--AFKDA 267 (399)
T ss_dssp TTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHH--HHTTC
T ss_pred CCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHH--HhCCC
Confidence 4468998864432 24446889999999999999999999764432222221122223344555433333222 12578
Q ss_pred cEEEEcCchh
Q 016053 152 DLIVLNTAVA 161 (396)
Q Consensus 152 DiV~~~~~~~ 161 (396)
|+|+.....+
T Consensus 268 DvVytd~W~S 277 (399)
T 3q98_A 268 DIVYPKSWAP 277 (399)
T ss_dssp SEEEECCCCC
T ss_pred CEEEecCccc
Confidence 9999986544
No 166
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=58.03 E-value=95 Score=28.11 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=56.6
Q ss_pred HHHHHHHcCC---CCCCEEEEEEecccCC--CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecC--CCccchHHHHHH
Q 016053 257 REHVRESLGV---RNEDLLFAIINSVSRG--KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSD--MNAQTKFESELR 329 (396)
Q Consensus 257 ~~~~r~~~g~---~~~~~~il~vG~l~~~--Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g--~~~~~~~~~~l~ 329 (396)
---+++.+|- ..-+++|.|+|-+.+. .=..-++.++..+ ++++.++++. ...+++..+.++
T Consensus 176 l~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~------------G~~v~~~~P~~~~~~~~~~~~~~~ 243 (359)
T 1zq6_A 176 ALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM------------GMDVTLLCPTPDYILDERYMDWAA 243 (359)
T ss_dssp HHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT------------TCEEEEECSSGGGCCCHHHHHHHH
T ss_pred HHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc------------CCEEEEEcCccccCCCHHHHHHHH
Confidence 3456777773 2223338999987654 3345566666542 6899999975 222223455566
Q ss_pred HHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecC
Q 016053 330 NYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 330 ~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS 364 (396)
+.+++.|. .+.+ ..++.+.+..+||+....
T Consensus 244 ~~a~~~g~--~v~~---~~d~~eav~~aDvVyt~~ 273 (359)
T 1zq6_A 244 QNVAESGG--SLQV---SHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHSC--EEEE---ECCHHHHHTTCSEEEEEC
T ss_pred HHHHHcCC--eEEE---ECCHHHHhcCCCEEEECC
Confidence 66666652 3433 257889999999987654
No 167
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=57.93 E-value=16 Score=31.14 Aligned_cols=41 Identities=17% Similarity=0.113 Sum_probs=33.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
.++|++.++|+......|=......|+++|+++|++|..+=
T Consensus 17 ~~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 17 LYFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp --CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HhhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34556888888777777777888999999999999999884
No 168
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=57.92 E-value=11 Score=31.32 Aligned_cols=37 Identities=14% Similarity=-0.012 Sum_probs=28.0
Q ss_pred cEEEEEeccCCC-CChH-HHHHHHHHHHHhC--CCEEEEEe
Q 016053 75 KLVLLVSHELSL-SGGP-LLLMELAFLLRGV--GTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~--G~~V~vi~ 111 (396)
||||+|...... +|.. .....+++.+++. |++|.++-
T Consensus 2 mkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~d 42 (212)
T 3r6w_A 2 SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARRE 42 (212)
T ss_dssp CCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 589999866554 4444 6777788888887 99999987
No 169
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=57.80 E-value=49 Score=29.02 Aligned_cols=84 Identities=5% Similarity=-0.080 Sum_probs=54.7
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC-------cCCHHHHHHHcCEEEecCCC------CCCCcc-
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK-------TLTVAPYLAAIDVLVQNSQA------WGECFG- 372 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~-------~~~~~~~~~~aDv~v~pS~~------~~E~fg- 372 (396)
++.++.++.........+.+.+++..+++|.. .|..+.- .+++.+.+..||+++++--. +....|
T Consensus 55 ~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~-~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l 133 (291)
T 3en0_A 55 NDAIIGIIPSASREPLLIGERYQTIFSDMGVK-ELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPL 133 (291)
T ss_dssp GGCEEEEECTTCSSHHHHHHHHHHHHHHHCCS-EEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHH
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCC-eeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCH
Confidence 45788888754433334667788888888874 4555432 13467899999999886431 011222
Q ss_pred -HHHHHHHhcC-CCEEEcCCC
Q 016053 373 -RITIEAMAFQ-LPVLVLSEL 391 (396)
Q Consensus 373 -~~~lEAma~G-~PVI~t~~g 391 (396)
-.+.|+...| +|++.+..|
T Consensus 134 ~~~L~~~~~~G~~~~~GtSAG 154 (291)
T 3en0_A 134 MDRIRQRVHNGEISLAGTSAG 154 (291)
T ss_dssp HHHHHHHHHTTSSEEEEETHH
T ss_pred HHHHHHHHHCCCeEEEEeCHH
Confidence 3567888899 888887654
No 170
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=57.55 E-value=94 Score=26.84 Aligned_cols=218 Identities=10% Similarity=-0.020 Sum_probs=102.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
+++|.++.+.....-.......+.+++.+.|+++.++..... ...... ..+ .....++|.
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~~----------~i~-~l~~~~vdg 61 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN---------EETQMS----------QIE-NMINRGVDV 61 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC---------HHHHHH----------HHH-HHHHTTCSE
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC---------HHHHHH----------HHH-HHHHcCCCE
Confidence 457888887644433456777888888999999998875322 110000 011 112357898
Q ss_pred EEEcCchh---hHHHHHHHhcCCCccccceeeeeeecccccCchhhhcccccc-ccceeeccccHHHHHHHHHhhhcccC
Q 016053 154 IVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLV-AGAMIDSHVTAEYWKNRTRERLRIKM 229 (396)
Q Consensus 154 V~~~~~~~---~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~g~~~ 229 (396)
|++..... ...+..+...++| ++........ ... ..+..+.........+.+.+..|.
T Consensus 62 iIi~~~~~~~~~~~~~~~~~~~iP-----vV~~~~~~~~-----------~~~~~~V~~D~~~~g~~a~~~L~~~~G~-- 123 (313)
T 3m9w_A 62 LVIIPYNGQVLSNVVKEAKQEGIK-----VLAYDRMIND-----------ADIDFYISFDNEKVGELQAKALVDIVPQ-- 123 (313)
T ss_dssp EEEECSSTTSCHHHHHHHHTTTCE-----EEEESSCCTT-----------SCCSEEEEECHHHHHHHHHHHHHHHCSS--
T ss_pred EEEeCCChhhhHHHHHHHHHCCCe-----EEEECCcCCC-----------CCceEEEecCHHHHHHHHHHHHHHhCCC--
Confidence 87765322 2345556666755 4432222111 011 122222333333334444423342
Q ss_pred CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 230 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
.++.++....+.... ..+ .+.-++.+++. +.. ....+... .....-..+...+++..+.+.. .++.
T Consensus 124 ~~i~~i~g~~~~~~~--~~R---~~Gf~~~l~~~-~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~------~~~~ 189 (313)
T 3m9w_A 124 GNYFLMGGSPVDNNA--KLF---RAGQMKVLKPY-VDS-GKIKVVGD-QWVDGWLPENALKIMENALTAN------NNKI 189 (313)
T ss_dssp EEEEEEESCTTCHHH--HHH---HHHHHHHHHHH-HHT-TSEEEEEE-EECGGGCHHHHHHHHHHHHHHT------TTCC
T ss_pred CcEEEEECCCCCccH--HHH---HHHHHHHHHhh-ccC-CCEEEEee-ccCCCcCHHHHHHHHHHHHHhC------CCCe
Confidence 356666432221110 000 01112223332 211 12233211 1111123344445555544321 1466
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
..+++.++. ....+.+.+++.|+.+.|.++|+-.
T Consensus 190 ~ai~~~~d~-----~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 190 DAVVASNDA-----TAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp CEEEESSHH-----HHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred eEEEECCCc-----hHHHHHHHHHHcCCCCCcEEEecCC
Confidence 777777532 3445677788888887899999853
No 171
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=57.39 E-value=34 Score=30.60 Aligned_cols=95 Identities=11% Similarity=0.018 Sum_probs=60.1
Q ss_pred CCCEEEEEEecc-cCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 268 NEDLLFAIINSV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l-~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
++.+.++++|-= .-. ...+.++..+ .++++++-+-+- ..+..++.+++++.. . .
T Consensus 16 ~~~irvgiIG~G~~~g---~~~~~~l~~~----------~~~~~lvav~d~------~~~~~~~~a~~~~~~-~-----~ 70 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAAR---ELHLPALKNL----------SHLFEITAVTSR------TRSHAEEFAKMVGNP-A-----V 70 (340)
T ss_dssp CCCEEEEEECCSHHHH---HTHHHHHHTT----------TTTEEEEEEECS------SHHHHHHHHHHHSSC-E-----E
T ss_pred CCceeEEEEecCHHHH---HHHHHHHHhC----------CCceEEEEEEcC------CHHHHHHHHHHhCCC-c-----c
Confidence 567888888862 111 1233343321 157888766653 345667777777642 1 1
Q ss_pred cCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 347 TLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 347 ~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.+++.++++. .|+++..+. ...-.-.+.+|+..|++|++=.
T Consensus 71 ~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~aGkhVl~EK 113 (340)
T 1zh8_A 71 FDSYEELLESGLVDAVDLTLP--VELNLPFIEKALRKGVHVICEK 113 (340)
T ss_dssp ESCHHHHHHSSCCSEEEECCC--GGGHHHHHHHHHHTTCEEEEES
T ss_pred cCCHHHHhcCCCCCEEEEeCC--chHHHHHHHHHHHCCCcEEEeC
Confidence 3678888874 788888776 4444556679999999998843
No 172
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=56.99 E-value=66 Score=30.22 Aligned_cols=86 Identities=15% Similarity=0.057 Sum_probs=51.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+.++|+++. || ......++.|.+.|.+|+|+.+.... .+.......++.++.-..... ...++|
T Consensus 11 ~~~~vlVvG-----gG--~va~~k~~~L~~~ga~V~vi~~~~~~-------~~~~l~~~~~i~~~~~~~~~~--~l~~~~ 74 (457)
T 1pjq_A 11 RDRDCLIVG-----GG--DVAERKARLLLEAGARLTVNALTFIP-------QFTVWANEGMLTLVEGPFDET--LLDSCW 74 (457)
T ss_dssp BTCEEEEEC-----CS--HHHHHHHHHHHHTTBEEEEEESSCCH-------HHHHHHTTTSCEEEESSCCGG--GGTTCS
T ss_pred CCCEEEEEC-----CC--HHHHHHHHHHHhCcCEEEEEcCCCCH-------HHHHHHhcCCEEEEECCCCcc--ccCCcc
Confidence 456788775 33 67778888999999999999864221 122222223555554332211 224789
Q ss_pred EEEEcCch---hhHHHHHHHhcCCC
Q 016053 153 LIVLNTAV---AGKWLDAVLKEDVP 174 (396)
Q Consensus 153 iV~~~~~~---~~~~~~~~~~~~~~ 174 (396)
+|++.+.. .......+...+++
T Consensus 75 lVi~at~~~~~n~~i~~~a~~~~i~ 99 (457)
T 1pjq_A 75 LAIAATDDDTVNQRVSDAAESRRIF 99 (457)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEcCCCHHHHHHHHHHHHHcCCE
Confidence 99887632 33445556666655
No 173
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=56.84 E-value=16 Score=31.89 Aligned_cols=40 Identities=23% Similarity=0.164 Sum_probs=30.9
Q ss_pred ccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+++|||++|......+|.. ..+..+++.+.+.|++|.++-
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiid 96 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFD 96 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBC
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 3457999998776666655 666668888888999999887
No 174
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=56.82 E-value=39 Score=30.20 Aligned_cols=70 Identities=17% Similarity=0.150 Sum_probs=49.1
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.++++++...+ .++..+++.. .|+++..+. ...-.-.+.+|+..|++
T Consensus 26 ~~~~l~av~d~------~~~~~~~~~~~~g~~~~~-----~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~Gk~ 92 (344)
T 3mz0_A 26 SGAEIVAVTDV------NQEAAQKVVEQYQLNATV-----YPNDDSLLADENVDAVLVTSW--GPAHESSVLKAIKAQKY 92 (344)
T ss_dssp SSEEEEEEECS------SHHHHHHHHHHTTCCCEE-----ESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEEcC------CHHHHHHHHHHhCCCCee-----eCCHHHHhcCCCCCEEEECCC--chhHHHHHHHHHHCCCc
Confidence 68887755543 346667777777642111 3678888887 899888776 55555567899999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++-.
T Consensus 93 vl~EK 97 (344)
T 3mz0_A 93 VFCEK 97 (344)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99754
No 175
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=56.66 E-value=8.8 Score=31.68 Aligned_cols=40 Identities=8% Similarity=-0.067 Sum_probs=24.8
Q ss_pred cccccEEEEEeccCCCCChHHHH-HHHHHHHHhCCCEEE-EEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLL-MELAFLLRGVGTKVN-WIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~-~~l~~~L~~~G~~V~-vi~ 111 (396)
+|.+|||++|......+|....+ ..+++.+ ..|++|. ++-
T Consensus 3 ~M~~mkIl~I~GS~r~~s~t~~la~~~~~~~-~~g~~v~~~id 44 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKASFNAAVARALPEIA-PEGIAITPLGS 44 (199)
T ss_dssp --CCEEEEEEECCCSTTCHHHHHHHHHHHHC-CTTEEEEECCC
T ss_pred CCCCCEEEEEEcCCCCCChHHHHHHHHHHHc-cCCCEEEEEEe
Confidence 45668999999776666655444 3444444 4688888 554
No 176
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=56.61 E-value=17 Score=33.11 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=41.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh-hhhhcc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-TINTAL 149 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 149 (396)
+|++|+|.+|.. | ..=..++..|.+.||+|.++..... -.+.+...|+.. ..... ......
T Consensus 19 Mm~~mkIgiIGl-----G--~mG~~~A~~L~~~G~~V~v~dr~~~---------~~~~l~~~g~~~--~~s~~e~~~~a~ 80 (358)
T 4e21_A 19 YFQSMQIGMIGL-----G--RMGADMVRRLRKGGHECVVYDLNVN---------AVQALEREGIAG--ARSIEEFCAKLV 80 (358)
T ss_dssp ---CCEEEEECC-----S--HHHHHHHHHHHHTTCEEEEECSCHH---------HHHHHHTTTCBC--CSSHHHHHHHSC
T ss_pred hhcCCEEEEECc-----h--HHHHHHHHHHHhCCCEEEEEeCCHH---------HHHHHHHCCCEE--eCCHHHHHhcCC
Confidence 566689999862 3 5666788899999999988853211 111222223321 11222 223335
Q ss_pred CCcEEEEcCchh
Q 016053 150 KADLIVLNTAVA 161 (396)
Q Consensus 150 ~~DiV~~~~~~~ 161 (396)
.+|+|++..+..
T Consensus 81 ~~DvVi~~vp~~ 92 (358)
T 4e21_A 81 KPRVVWLMVPAA 92 (358)
T ss_dssp SSCEEEECSCGG
T ss_pred CCCEEEEeCCHH
Confidence 679999887654
No 177
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=56.48 E-value=15 Score=31.14 Aligned_cols=37 Identities=5% Similarity=0.071 Sum_probs=28.3
Q ss_pred cEEEEEeccCCCCCh-HHHHHHHHHHHHhC-CCEEEEEe
Q 016053 75 KLVLLVSHELSLSGG-PLLLMELAFLLRGV-GTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~-G~~V~vi~ 111 (396)
|||++|......+|. ...+..+++.|.+. |++|.++.
T Consensus 2 mkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~d 40 (242)
T 1sqs_A 2 NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRT 40 (242)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 589999866555454 47777788888887 99999886
No 178
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=56.44 E-value=15 Score=30.11 Aligned_cols=38 Identities=11% Similarity=0.103 Sum_probs=28.5
Q ss_pred cEEEEEeccCCC--CChH-HHHHHHHHHHHhCC--CEEEEEec
Q 016053 75 KLVLLVSHELSL--SGGP-LLLMELAFLLRGVG--TKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~--gG~~-~~~~~l~~~L~~~G--~~V~vi~~ 112 (396)
||||+|...... +|.. .....+++.+.+.| ++|.++--
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 589998876654 4544 66677888898877 99998863
No 179
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=56.24 E-value=33 Score=30.65 Aligned_cols=79 Identities=13% Similarity=0.012 Sum_probs=46.7
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..||+++... .++...++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|
T Consensus 156 ~glkva~vGD~------~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~e--av~~aD 227 (323)
T 3gd5_A 156 AGLKLAYVGDG------NNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFE--AARGAH 227 (323)
T ss_dssp TTCEEEEESCC------CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHH--HHTTCS
T ss_pred CCCEEEEECCC------CcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHH--HhcCCC
Confidence 45689988742 5889999999999999999999765443332221122222223433322222211 125678
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 228 vvyt~~w 234 (323)
T 3gd5_A 228 ILYTDVW 234 (323)
T ss_dssp EEEECCC
T ss_pred EEEEece
Confidence 8887643
No 180
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=56.10 E-value=13 Score=30.79 Aligned_cols=40 Identities=15% Similarity=-0.001 Sum_probs=28.7
Q ss_pred ccccEEEEEeccCCCCChH-H-HHHHHHHHHHhCCCEEEEEeccCC
Q 016053 72 MKSKLVLLVSHELSLSGGP-L-LLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~-~-~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
++++||++... |+.. . ...++++.|++.|++|.++.....
T Consensus 5 l~~k~I~lgiT----Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLT----GSHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECC----SCGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCEEEEEEE----ChHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 34567776653 2333 4 689999999999999999985543
No 181
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=55.93 E-value=13 Score=28.82 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=43.4
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--hhhhh--
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--ETINT-- 147 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-- 147 (396)
|+.++|+++. +| ..-..+++.|.+.|++|+++...... ....+.. ....++.++.-... ..+..
T Consensus 1 ~~~~~vlI~G-----~G--~vG~~la~~L~~~g~~V~vid~~~~~----~~~~~~~-~~~~~~~~i~gd~~~~~~l~~a~ 68 (153)
T 1id1_A 1 HRKDHFIVCG-----HS--ILAINTILQLNQRGQNVTVISNLPED----DIKQLEQ-RLGDNADVIPGDSNDSSVLKKAG 68 (153)
T ss_dssp CCCSCEEEEC-----CS--HHHHHHHHHHHHTTCCEEEEECCCHH----HHHHHHH-HHCTTCEEEESCTTSHHHHHHHT
T ss_pred CCCCcEEEEC-----CC--HHHHHHHHHHHHCCCCEEEEECCChH----HHHHHHH-hhcCCCeEEEcCCCCHHHHHHcC
Confidence 4456777664 22 67788899999999999999753210 0000111 11235566543322 22222
Q ss_pred ccCCcEEEEcCc
Q 016053 148 ALKADLIVLNTA 159 (396)
Q Consensus 148 ~~~~DiV~~~~~ 159 (396)
..+.|+|++.++
T Consensus 69 i~~ad~vi~~~~ 80 (153)
T 1id1_A 69 IDRCRAILALSD 80 (153)
T ss_dssp TTTCSEEEECSS
T ss_pred hhhCCEEEEecC
Confidence 367899988764
No 182
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=55.91 E-value=11 Score=27.86 Aligned_cols=54 Identities=11% Similarity=0.247 Sum_probs=35.2
Q ss_pred EEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 311 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 311 l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
++++|.|...+.-....+++.+.+.|++..|...+ ..++...+..+|+++.+..
T Consensus 25 lvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~-~~~~~~~~~~~DlIist~~ 78 (113)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQSHNIPVELIQCR-VNEIETYMDGVHLICTTAR 78 (113)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEEC-TTTTTTSTTSCSEEEESSC
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEec-HHHHhhccCCCCEEEECCc
Confidence 56666666443334688888898888864444443 3344445678999988766
No 183
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.87 E-value=55 Score=30.11 Aligned_cols=102 Identities=11% Similarity=0.046 Sum_probs=63.9
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
.+++.|.++|-=.-. ...+++++++...... -.++++++-+.+- ..+..++.+++++.+. + .
T Consensus 24 s~klrvgiIG~G~ig---~~h~~~~~~~~~~~~~---~~~~~elvav~d~------~~~~a~~~a~~~~~~~-~-----y 85 (412)
T 4gqa_A 24 SARLNIGLIGSGFMG---QAHADAYRRAAMFYPD---LPKRPHLYALADQ------DQAMAERHAAKLGAEK-A-----Y 85 (412)
T ss_dssp -CEEEEEEECCSHHH---HHHHHHHHHHHHHCTT---SSSEEEEEEEECS------SHHHHHHHHHHHTCSE-E-----E
T ss_pred cccceEEEEcCcHHH---HHHHHHHHhccccccc---cCCCeEEEEEEcC------CHHHHHHHHHHcCCCe-E-----E
Confidence 456889998852111 2345566554332211 0135677666553 4567788888887652 1 2
Q ss_pred CCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 348 LTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 348 ~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.+..++++. .|+++..+. ...-.-.+++|+..|++|++=.
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkhVl~EK 127 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSP--NHLHYTMAMAAIAAGKHVYCEK 127 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHcCCCeEeec
Confidence 578888874 678877766 4555566799999999998744
No 184
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=55.75 E-value=20 Score=32.38 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=24.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
||+|+++. || ..-..++.+.++.||+|.++...
T Consensus 1 MK~I~ilG-----gg--~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 1 MKTICLVG-----GK--LQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC-----CC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 46888886 34 34457788889999999999643
No 185
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=55.55 E-value=53 Score=30.76 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=52.4
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccC-
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK- 150 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (396)
++.++|+++.- ||.... .++.|.++|++|++.-..... . .+..+.+...|+++..-.....+. .+
T Consensus 7 ~~~k~v~viG~----G~sG~s---~A~~l~~~G~~V~~~D~~~~~-~----~~~~~~L~~~gi~~~~g~~~~~~~--~~~ 72 (451)
T 3lk7_A 7 FENKKVLVLGL----ARSGEA---AARLLAKLGAIVTVNDGKPFD-E----NPTAQSLLEEGIKVVCGSHPLELL--DED 72 (451)
T ss_dssp TTTCEEEEECC----TTTHHH---HHHHHHHTTCEEEEEESSCGG-G----CHHHHHHHHTTCEEEESCCCGGGG--GSC
T ss_pred cCCCEEEEEee----CHHHHH---HHHHHHhCCCEEEEEeCCccc-C----ChHHHHHHhCCCEEEECCChHHhh--cCC
Confidence 34578988873 332232 489999999999987532210 0 113345556688776433222121 24
Q ss_pred CcEEEEcC--chhhHHHHHHHhcCCCcc
Q 016053 151 ADLIVLNT--AVAGKWLDAVLKEDVPRV 176 (396)
Q Consensus 151 ~DiV~~~~--~~~~~~~~~~~~~~~~~~ 176 (396)
+|+|+... +.....+..++..++|.+
T Consensus 73 ~d~vv~spgi~~~~p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMVKKALEKQIPVL 100 (451)
T ss_dssp EEEEEECTTSCTTSHHHHHHHHTTCCEE
T ss_pred CCEEEECCcCCCCChhHHHHHHCCCcEE
Confidence 89888765 334455566667776643
No 186
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=55.32 E-value=35 Score=28.47 Aligned_cols=74 Identities=16% Similarity=0.172 Sum_probs=43.3
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--------- 142 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 142 (396)
+++||+++.+ |....+..+.+++.+ .+++|..+..+.+. +..+.....|++++.....
T Consensus 11 ~~~ri~vl~S-----G~gsnl~all~~~~~~~~~eI~~Vis~~~a-------~~~~~A~~~gIp~~~~~~~~~~~r~~~d 78 (215)
T 3da8_A 11 APARLVVLAS-----GTGSLLRSLLDAAVGDYPARVVAVGVDREC-------RAAEIAAEASVPVFTVRLADHPSRDAWD 78 (215)
T ss_dssp SSEEEEEEES-----SCCHHHHHHHHHSSTTCSEEEEEEEESSCC-------HHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred CCcEEEEEEe-----CChHHHHHHHHHHhccCCCeEEEEEeCCch-------HHHHHHHHcCCCEEEeCcccccchhhhh
Confidence 3457887763 334567777777644 34577765544331 1234456678888766421
Q ss_pred ---hhhhhccCCcEEEEcC
Q 016053 143 ---ETINTALKADLIVLNT 158 (396)
Q Consensus 143 ---~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 79 ~~~~~~l~~~~~Dlivlag 97 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAG 97 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHhhCCCEEEEcC
Confidence 1223457999998765
No 187
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=55.15 E-value=13 Score=34.99 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=27.5
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.||++|||++. +++ ....+++++++.|+++.++..
T Consensus 3 ~m~~~kiLI~g------~g~-~a~~i~~aa~~~G~~~v~v~~ 37 (446)
T 3ouz_A 3 AMEIKSILIAN------RGE-IALRALRTIKEMGKKAICVYS 37 (446)
T ss_dssp TTCCCEEEECC------CHH-HHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccceEEEEC------CCH-HHHHHHHHHHHcCCEEEEEEc
Confidence 56678898864 333 667899999999999998873
No 188
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=55.11 E-value=17 Score=31.25 Aligned_cols=36 Identities=22% Similarity=0.153 Sum_probs=25.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
..+|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 23 ~~~k~vlIT-----Gas~gIG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 23 QAKRVAFVT-----GGMGGLGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp -CCCEEEET-----TTTSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred hcCCEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 334566676 444456678899999999999887633
No 189
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=54.88 E-value=56 Score=27.80 Aligned_cols=72 Identities=7% Similarity=0.024 Sum_probs=41.3
Q ss_pred EEEEEec-CCCccchHHHHHHHHHHhcCCCCcEEEec---CcCCHHHHHH-HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 310 HAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVN---KTLTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 310 ~l~ivG~-g~~~~~~~~~~l~~~~~~~~l~~~V~~~g---~~~~~~~~~~-~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++.|+|. |. .-..+.+.+.+. +.+.+.+ ..+++.+++. .+|++|--+. .+..--.+..++..|+|
T Consensus 2 kV~V~Ga~G~-----mG~~i~~~~~~~---~~~elva~~d~~~dl~~~~~~~~DvvIDfT~--p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 2 RVGVLGAKGK-----VGTTMVRAVAAA---DDLTLSAELDAGDPLSLLTDGNTEVVIDFTH--PDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp EEEEETTTSH-----HHHHHHHHHHHC---TTCEEEEEECTTCCTHHHHHTTCCEEEECSC--TTTHHHHHHHHHHTTCE
T ss_pred EEEEECCCCH-----HHHHHHHHHHhC---CCCEEEEEEccCCCHHHHhccCCcEEEEccC--hHHHHHHHHHHHHcCCC
Confidence 5677774 53 334444444432 1222332 2256666665 7888885555 56554445566888888
Q ss_pred EEEcCCC
Q 016053 385 VLVLSEL 391 (396)
Q Consensus 385 VI~t~~g 391 (396)
+|....|
T Consensus 72 ~VigTTG 78 (245)
T 1p9l_A 72 AVVGTTG 78 (245)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 8886554
No 190
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=54.61 E-value=43 Score=29.93 Aligned_cols=80 Identities=11% Similarity=0.046 Sum_probs=48.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. |..+....++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|
T Consensus 166 ~gl~va~vGD-----~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~e--av~~aD 238 (325)
T 1vlv_A 166 KGVKVVFMGD-----TRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEE--ALAGAD 238 (325)
T ss_dssp TTCEEEEESC-----TTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHH--HHTTCS
T ss_pred CCcEEEEECC-----CCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHH--HHccCC
Confidence 3468999874 224899999999999999999999765433222211122222244544432222221 125789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 239 vvyt~~w 245 (325)
T 1vlv_A 239 VVYTDVW 245 (325)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 9988654
No 191
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=54.55 E-value=1e+02 Score=26.66 Aligned_cols=103 Identities=13% Similarity=-0.051 Sum_probs=61.9
Q ss_pred EecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc---------cchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 276 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA---------QTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 276 vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~---------~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+.........+.+++.+..+++. ...++-.+.-.++ ..+....+++.+++.|++ +.-..+
T Consensus 42 IAgpc~~~~~e~a~~~a~~~k~~---------ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~--~~te~~ 110 (276)
T 1vs1_A 42 IAGPCSVESWEQVREAALAVKEA---------GAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLP--VVTEVL 110 (276)
T ss_dssp EEECSBCCCHHHHHHHHHHHHHH---------TCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCC--EEEECC
T ss_pred EEecCCCCCHHHHHHHHHHHHHh---------CCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCc--EEEecC
Confidence 33345777888888888877652 2223322211110 134567788888999987 222222
Q ss_pred -cCCHHHHHHHcCEEEecCCCCCCCccHHHHH-HHhcCCCEEEcCCCC
Q 016053 347 -TLTVAPYLAAIDVLVQNSQAWGECFGRITIE-AMAFQLPVLVLSELH 392 (396)
Q Consensus 347 -~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lE-Ama~G~PVI~t~~gG 392 (396)
.+++..+-..+|++=.+|. +.--..+++ +...|+||+.++...
T Consensus 111 d~~~~~~l~~~vd~~kIgs~---~~~n~~ll~~~a~~~kPV~lk~G~~ 155 (276)
T 1vs1_A 111 DPRHVETVSRYADMLQIGAR---NMQNFPLLREVGRSGKPVLLKRGFG 155 (276)
T ss_dssp CGGGHHHHHHHCSEEEECGG---GTTCHHHHHHHHHHTCCEEEECCTT
T ss_pred CHHHHHHHHHhCCeEEECcc---cccCHHHHHHHHccCCeEEEcCCCC
Confidence 2445555455899999998 333444454 445899999988654
No 192
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=54.43 E-value=47 Score=29.40 Aligned_cols=80 Identities=18% Similarity=0.126 Sum_probs=47.4
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. |..+....++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|
T Consensus 147 ~gl~va~vGD-----~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~e--av~~aD 219 (307)
T 2i6u_A 147 RGLRLSYFGD-----GANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHA--AAAGAD 219 (307)
T ss_dssp TTCEEEEESC-----TTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHH--HHTTCS
T ss_pred CCeEEEEECC-----CCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHH--HhcCCC
Confidence 3468999874 224899999999999999999999765443322221122222234433322222211 125789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 220 vvy~~~w 226 (307)
T 2i6u_A 220 VLVTDTW 226 (307)
T ss_dssp EEEECCS
T ss_pred EEEecce
Confidence 9988643
No 193
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=54.00 E-value=17 Score=31.06 Aligned_cols=35 Identities=14% Similarity=-0.002 Sum_probs=24.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
..|+.+|+ ||..-.=..+++.|.++|++|.+....
T Consensus 3 ~~k~vlVT-----Gas~gIG~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 3 QNKCALVT-----GSSRGVGKAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp CCCEEEES-----SCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEe-----cCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 34566666 344446667889999999999987543
No 194
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=53.83 E-value=16 Score=31.46 Aligned_cols=39 Identities=18% Similarity=0.043 Sum_probs=27.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
++||||+.+..... ..-+..|.++|++ +++|+|+.+...
T Consensus 10 ~~m~ILlTNDDGi~---apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 10 PKLRLLLSNDDGVY---AKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp -CCEEEEECSSCTT---CHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCeEEEEcCCCCC---CHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 44789877753221 2667888888887 789999996543
No 195
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=53.63 E-value=14 Score=30.08 Aligned_cols=24 Identities=13% Similarity=0.018 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 91 LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
....++++.|++.|++|.++....
T Consensus 16 ~k~~~l~~~L~~~g~~V~vv~T~~ 39 (181)
T 1g63_A 16 ININHYIVELKQHFDEVNILFSPS 39 (181)
T ss_dssp GGHHHHHHHHTTTSSCEEEEECGG
T ss_pred HHHHHHHHHHHHCCCEEEEEEchh
Confidence 577899999999999999998543
No 196
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=53.63 E-value=20 Score=27.88 Aligned_cols=38 Identities=32% Similarity=0.223 Sum_probs=26.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.|.+|||.+=+. .+| -..-..+.+.|+++||+|.=+..
T Consensus 4 ~m~~mkI~igsD---haG-~~lK~~i~~~L~~~G~eV~D~G~ 41 (148)
T 4em8_A 4 SMVVKRVFLSSD---HAG-VELRLFLSAYLRDLGCEVFDCGC 41 (148)
T ss_dssp CCSCSEEEEEEC---GGG-HHHHHHHHHHHHHTTCEEEECCC
T ss_pred cceeeEEEEEEC---chh-HHHHHHHHHHHHHCCCEEEEeCC
Confidence 455678887663 233 34566788999999999986653
No 197
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=53.59 E-value=19 Score=30.52 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=24.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 4 ~k~~lVT-----Gas~gIG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVT-----GASRGIGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3556666 444456677899999999999887643
No 198
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=53.48 E-value=12 Score=30.74 Aligned_cols=39 Identities=10% Similarity=0.112 Sum_probs=27.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++.+||++.... +.+.....++++.|++.|++|.++..+
T Consensus 6 l~~k~IllgvTG---s~aa~k~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 6 LKDKKLLIGICG---SISSVGISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GGGCEEEEEECS---CGGGGGTHHHHHHHTTTSSEEEEEECH
T ss_pred cCCCEEEEEEEC---HHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 445677766531 122256788999999999999999854
No 199
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=53.36 E-value=47 Score=29.53 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCc----hhhhhhhhhhhhhcceEEEEcCchh-----h
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQE-----T 144 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 144 (396)
+|||+|+.+ + .+.....++|.+.||+|..+....+... .....+..+.....|++++.....+ .
T Consensus 3 ~mrIvf~Gt-----~--~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 75 (314)
T 1fmt_A 3 SLRIIFAGT-----P--DFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQ 75 (314)
T ss_dssp CCEEEEEEC-----S--HHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHH
T ss_pred CCEEEEEec-----C--HHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHH
Confidence 468988874 1 2444445666667899885553321111 0111234555667788887543321 2
Q ss_pred hhhccCCcEEEEcC
Q 016053 145 INTALKADLIVLNT 158 (396)
Q Consensus 145 ~~~~~~~DiV~~~~ 158 (396)
..+..++|++++-.
T Consensus 76 ~l~~~~~Dliv~~~ 89 (314)
T 1fmt_A 76 LVAELQADVMVVVA 89 (314)
T ss_dssp HHHHTTCSEEEEES
T ss_pred HHHhcCCCEEEEee
Confidence 23457999998765
No 200
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=53.04 E-value=40 Score=29.78 Aligned_cols=68 Identities=10% Similarity=-0.047 Sum_probs=42.3
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEE
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 386 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI 386 (396)
++++++-+-+.. .+..++.+++++.+ ..++..++-..+|+++..+. ...-.-.+.+|+..|++|+
T Consensus 29 ~~~~lvav~d~~------~~~~~~~~~~~g~~-------~~~~~~~l~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~ 93 (319)
T 1tlt_A 29 SDWTLQGAWSPT------RAKALPICESWRIP-------YADSLSSLAASCDAVFVHSS--TASHFDVVSTLLNAGVHVC 93 (319)
T ss_dssp SSEEEEEEECSS------CTTHHHHHHHHTCC-------BCSSHHHHHTTCSEEEECSC--TTHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEECCC------HHHHHHHHHHcCCC-------ccCcHHHhhcCCCEEEEeCC--chhHHHHHHHHHHcCCeEE
Confidence 678877443321 12334455555543 12344445457899988776 5555566778999999999
Q ss_pred EcC
Q 016053 387 VLS 389 (396)
Q Consensus 387 ~t~ 389 (396)
+-.
T Consensus 94 ~eK 96 (319)
T 1tlt_A 94 VDK 96 (319)
T ss_dssp EES
T ss_pred EeC
Confidence 753
No 201
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=53.04 E-value=19 Score=29.15 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=28.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~ 112 (396)
|||+++... ..|..+.....+++.+.+ .|++|.++..
T Consensus 5 ~kiliiy~S-~~GnT~~~a~~i~~~l~~~~g~~v~~~~l 42 (188)
T 2ark_A 5 GKVLVIYDT-RTGNTKKMAELVAEGARSLEGTEVRLKHV 42 (188)
T ss_dssp EEEEEEECC-SSSHHHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred CEEEEEEEC-CCcHHHHHHHHHHHHHhhcCCCeEEEEEh
Confidence 588888754 234455888889999998 8999988863
No 202
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=52.87 E-value=20 Score=30.40 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=29.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+.+.+.-...|-.....+|+.+|+++|++|.++-.+
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 356666654444555699999999999999999998744
No 203
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=52.79 E-value=11 Score=35.91 Aligned_cols=46 Identities=13% Similarity=0.013 Sum_probs=32.3
Q ss_pred EEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCC
Q 016053 341 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 341 V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~g 391 (396)
+...++..+. ++|+.+|+-++-+. |--++++||+++|+|+|+-...
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCS
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec----ccchhHHHHHHcCCCEEecccc
Confidence 3444576554 89999996333233 3447889999999999997654
No 204
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=52.71 E-value=26 Score=31.84 Aligned_cols=99 Identities=11% Similarity=0.079 Sum_probs=60.2
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCC
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT 349 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~ 349 (396)
++.|+++|-=.-.+ .-++++..+..... -..+.+++-+.+- ..+..++.+++++.+. + ..+
T Consensus 6 klrvgiIG~G~ig~---~h~~~~~~~~~~~~----~~~~~~l~av~d~------~~~~a~~~a~~~g~~~-~-----~~d 66 (390)
T 4h3v_A 6 NLGIGLIGYAFMGA---AHSQAWRSAPRFFD----LPLHPDLNVLCGR------DAEAVRAAAGKLGWST-T-----ETD 66 (390)
T ss_dssp EEEEEEECHHHHHH---HHHHHHHHHHHHSC----CSSEEEEEEEECS------SHHHHHHHHHHHTCSE-E-----ESC
T ss_pred cCcEEEEcCCHHHH---HHHHHHHhCccccc----cccCceEEEEEcC------CHHHHHHHHHHcCCCc-c-----cCC
Confidence 46777777421112 23455555432110 0124567666653 4567788888888652 1 257
Q ss_pred HHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 350 VAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 350 ~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
..++++. .|+++..+. ...-.-.+.+|+.+|++|++=.
T Consensus 67 ~~~ll~~~~iDaV~I~tP--~~~H~~~~~~al~aGkhVl~EK 106 (390)
T 4h3v_A 67 WRTLLERDDVQLVDVCTP--GDSHAEIAIAALEAGKHVLCEK 106 (390)
T ss_dssp HHHHTTCTTCSEEEECSC--GGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHhcCCCCCEEEEeCC--hHHHHHHHHHHHHcCCCceeec
Confidence 7788865 677877776 4555556789999999998743
No 205
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=52.53 E-value=35 Score=30.34 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=23.2
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.+...
T Consensus 6 k~vlVT-----Gas~GIG~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 6 KIILIT-----GASSGFGRLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CEEEES-----SCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-----CCCcHHHHHHHHHHHHCCCEEEEecC
Confidence 566676 33334667889999999999988764
No 206
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=52.47 E-value=1.1e+02 Score=29.26 Aligned_cols=99 Identities=12% Similarity=0.046 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc--cchHHHHHHHHHHhcCCCCcEEEecCc--CCHHHHHHHcCEE
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA--QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVL 360 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~--~~~~~~~l~~~~~~~~l~~~V~~~g~~--~~~~~~~~~aDv~ 360 (396)
....-.++..+.+.+.+...+.++-++.|+|..+.+ .+.+..+++++.++.|++-++.+.|.. +|+.. +..|++-
T Consensus 130 ~~G~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~-~~~A~~n 208 (525)
T 3aek_B 130 NYGADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRK-LGQAHFN 208 (525)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHT-GGGSSEE
T ss_pred hHHHHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHh-hccCCEE
Confidence 444445555555544321001124579999975422 234668899999999998766666653 44433 4445555
Q ss_pred EecCCCCCCCccHHHHHHH--hcCCCEEEc
Q 016053 361 VQNSQAWGECFGRITIEAM--AFQLPVLVL 388 (396)
Q Consensus 361 v~pS~~~~E~fg~~~lEAm--a~G~PVI~t 388 (396)
+..+. ..+..+.+.| -+|+|.+..
T Consensus 209 iv~~~----~~g~~~A~~Le~r~GiP~i~~ 234 (525)
T 3aek_B 209 VLMYP----ETGESAARHLERACKQPFTKI 234 (525)
T ss_dssp EECCH----HHHHHHHHHHHHHSCCCBCCC
T ss_pred EEECh----hhHHHHHHHHHHHcCCCceec
Confidence 54332 3567788888 579998875
No 207
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=52.34 E-value=48 Score=29.34 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=22.8
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|||+++. .| ..=..++..|.+.|++|+++...
T Consensus 2 ~mkI~IiG-----aG--aiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIG-----TG--AIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEES-----CC--HHHHHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEEC-----cC--HHHHHHHHHHHhCCCeEEEEeCC
Confidence 36899886 23 23345677788889999998743
No 208
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=52.18 E-value=23 Score=31.46 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=23.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhC-C-CEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-TKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G-~~V~vi~~ 112 (396)
|++|+||++. +|.. ..+++.|++. | ++|.++..
T Consensus 2 m~~~~Ili~g-----~g~~---~~l~~~l~~~~~~~~v~~~d~ 36 (331)
T 2pn1_A 2 MQKPHLLITS-----AGRR---AKLVEYFVKEFKTGRVSTADC 36 (331)
T ss_dssp TTCCEEEEES-----CTTC---HHHHHHHHHHCCSSEEEEEES
T ss_pred CccceEEEec-----CCch---HHHHHHHHHhcCCCEEEEEeC
Confidence 6778999876 3332 4678888875 6 88877754
No 209
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=52.08 E-value=21 Score=28.95 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=45.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchh---hhh-hccCC
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE---TIN-TALKA 151 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~ 151 (396)
||+.+.+.-...|-.....+|+..|.++|.+|.++-.+... .... +. .....++++++..... .+. ...++
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~---~~~~-~~-~~~~~~~~~~~~~~~~l~~~l~~l~~~y 76 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM---SLTN-WS-KAGKAAFDVFTAASEKDVYGIRKDLADY 76 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC---HHHH-HH-TTSCCSSEEEECCSHHHHHTHHHHTTTS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC---CHHH-HH-hcCCCCCcEEecCcHHHHHHHHHhcCCC
Confidence 56656644444555689999999999999999998744221 1110 11 0122345565554321 111 12468
Q ss_pred cEEEEcCc
Q 016053 152 DLIVLNTA 159 (396)
Q Consensus 152 DiV~~~~~ 159 (396)
|+|++.++
T Consensus 77 D~viiD~~ 84 (206)
T 4dzz_A 77 DFAIVDGA 84 (206)
T ss_dssp SEEEEECC
T ss_pred CEEEEECC
Confidence 88887775
No 210
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=52.03 E-value=25 Score=31.48 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=24.0
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|++|||+++.. | ..=..++..|.+.|++|+++..
T Consensus 1 M~~mkI~IiGa-----G--~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 1 MSLTRICIVGA-----G--AVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp -CCCCEEEESC-----C--HHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEEECc-----C--HHHHHHHHHHHHCCCEEEEEEC
Confidence 44578998862 3 3444567788889999999874
No 211
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=51.92 E-value=43 Score=30.16 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=46.3
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..||+++.. + .+....++.++...|.+|.++++.+-...........+.....|..+........ .-.+.|
T Consensus 178 ~glkva~vGD-----~-~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~e--av~~aD 249 (340)
T 4ep1_A 178 KGIKLAYVGD-----G-NNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPEL--AVNEAD 249 (340)
T ss_dssp TTCEEEEESC-----C-CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHH--HHTTCS
T ss_pred CCCEEEEECC-----C-chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHH--HhCCCC
Confidence 4568999864 2 4789999999999999999999765443333222222222233433322222211 125678
Q ss_pred EEEEcC
Q 016053 153 LIVLNT 158 (396)
Q Consensus 153 iV~~~~ 158 (396)
+|+...
T Consensus 250 Vvyt~~ 255 (340)
T 4ep1_A 250 FIYTDV 255 (340)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 888754
No 212
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=51.82 E-value=23 Score=29.59 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=28.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+++.+.+.-...|-.....+|+..|+++|++|.++-.+
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 55555544444455689999999999999999998744
No 213
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=51.79 E-value=34 Score=30.24 Aligned_cols=34 Identities=21% Similarity=0.111 Sum_probs=23.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|+|+ |+ ||....=..+++.|.++|++|.++...
T Consensus 5 ~~~vl-VT-----GatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTIL-VT-----GGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SCEEE-EE-----TTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcEEE-Ee-----cCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 45665 44 333355667888999999999988743
No 214
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=51.69 E-value=49 Score=30.91 Aligned_cols=75 Identities=16% Similarity=-0.005 Sum_probs=46.3
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHH---hcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhc
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVM---QKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF 381 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~---~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~ 381 (396)
++++++-+-+-. .+..++.++ +++++.--.+.+..++..++++ ..|+++..+. ...-.-.+.+||..
T Consensus 43 ~~~~lvav~d~~------~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp--~~~h~~~~~~al~a 114 (444)
T 2ixa_A 43 DDVEIVAFADPD------PYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP--WEWHHEHGVAAMKA 114 (444)
T ss_dssp TTEEEEEEECSC------HHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC--GGGHHHHHHHHHHT
T ss_pred CCcEEEEEEeCC------HHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHC
Confidence 688887665532 233344333 4555322223322347888887 4788888776 44445566899999
Q ss_pred CCCEEEcC
Q 016053 382 QLPVLVLS 389 (396)
Q Consensus 382 G~PVI~t~ 389 (396)
|++|++-.
T Consensus 115 GkhV~~EK 122 (444)
T 2ixa_A 115 GKIVGMEV 122 (444)
T ss_dssp TCEEEECC
T ss_pred CCeEEEeC
Confidence 99999743
No 215
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=51.54 E-value=89 Score=25.86 Aligned_cols=74 Identities=11% Similarity=0.015 Sum_probs=44.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------- 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 142 (396)
|||+++.+ |....+..+.+++++. +++|..+....+.. ...+.....|++++.....
T Consensus 1 ~ri~vl~S-----g~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (212)
T 1jkx_A 1 MNIVVLIS-----GNGSNLQAIIDACKTNKIKGTVRAVFSNKADA------FGLERARQAGIATHTLIASAFDSREAYDR 69 (212)
T ss_dssp CEEEEEES-----SCCHHHHHHHHHHHTTSSSSEEEEEEESCTTC------HHHHHHHHTTCEEEECCGGGCSSHHHHHH
T ss_pred CEEEEEEE-----CCcHHHHHHHHHHHcCCCCceEEEEEeCCCch------HHHHHHHHcCCcEEEeCcccccchhhccH
Confidence 36776663 2224677888887775 57877555443221 1234556778988764321
Q ss_pred --hhhhhccCCcEEEEcCc
Q 016053 143 --ETINTALKADLIVLNTA 159 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~~ 159 (396)
....+..++|+|++-..
T Consensus 70 ~~~~~l~~~~~Dliv~agy 88 (212)
T 1jkx_A 70 ELIHEIDMYAPDVVVLAGF 88 (212)
T ss_dssp HHHHHHGGGCCSEEEESSC
T ss_pred HHHHHHHhcCCCEEEEeCh
Confidence 12234579999988763
No 216
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=51.43 E-value=14 Score=30.85 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=27.4
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
.|++|||.++. .| ..-..++..|.+.|++|.++....
T Consensus 20 ~m~mmkI~IIG-----~G--~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 20 FQSMTTYAIIG-----AG--AIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp GGGSCCEEEEE-----CH--HHHHHHHHHHHHTTCCEEEECTTC
T ss_pred hhcCCEEEEEC-----CC--HHHHHHHHHHHhCCCEEEEEECCC
Confidence 45667999886 23 566678888999999999866443
No 217
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=51.10 E-value=40 Score=28.12 Aligned_cols=74 Identities=15% Similarity=0.054 Sum_probs=44.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCC--CEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc-------hhh
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-------QET 144 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 144 (396)
++||+++.+ |....+..+.+++.+.+ ++|..+....+... -.+.....|++++.... ...
T Consensus 8 ~~ri~vl~S-----G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~------~l~~A~~~gIp~~~~~~~~~~~~~~~~ 76 (215)
T 3kcq_A 8 ELRVGVLIS-----GRGSNLEALAKAFSTEESSVVISCVISNNAEAR------GLLIAQSYGIPTFVVKRKPLDIEHIST 76 (215)
T ss_dssp CEEEEEEES-----SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCT------HHHHHHHTTCCEEECCBTTBCHHHHHH
T ss_pred CCEEEEEEE-----CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchH------HHHHHHHcCCCEEEeCcccCChHHHHH
Confidence 457887762 44467788888876643 67776554433211 12345567888875432 123
Q ss_pred hhhccCCcEEEEcC
Q 016053 145 INTALKADLIVLNT 158 (396)
Q Consensus 145 ~~~~~~~DiV~~~~ 158 (396)
..+..++|+|++-.
T Consensus 77 ~L~~~~~Dlivlag 90 (215)
T 3kcq_A 77 VLREHDVDLVCLAG 90 (215)
T ss_dssp HHHHTTCSEEEESS
T ss_pred HHHHhCCCEEEEeC
Confidence 33568999999876
No 218
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=51.05 E-value=45 Score=29.52 Aligned_cols=34 Identities=9% Similarity=0.098 Sum_probs=20.5
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++|+||+.. |....=..+++.|.++|+++.|+.
T Consensus 22 ~~~~~vlVtG------atG~iG~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 22 SNAMNILVTG------GAGFIGSNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --CEEEEEET------TTSHHHHHHHHHHHHHCTTEEEEE
T ss_pred cCCCeEEEEC------CccHHHHHHHHHHHhhCCCcEEEE
Confidence 4456776543 434566778888999994444443
No 219
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=51.01 E-value=14 Score=30.61 Aligned_cols=79 Identities=13% Similarity=0.085 Sum_probs=53.3
Q ss_pred CEEEEEEecCC--CccchHHHHHHHHHHhcCCCCcEEEec----CcCCHHHHHHHcCEEEecCCCCCCCc---------c
Q 016053 308 SVHAVIIGSDM--NAQTKFESELRNYVMQKKIQDRVHFVN----KTLTVAPYLAAIDVLVQNSQAWGECF---------G 372 (396)
Q Consensus 308 ~~~l~ivG~g~--~~~~~~~~~l~~~~~~~~l~~~V~~~g----~~~~~~~~~~~aDv~v~pS~~~~E~f---------g 372 (396)
.-++.++..+. +...++...+++..+++|.+ +..+. ..++..+.+..||.+++|-- +.+ |
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~ad~I~l~GG---~~~~l~~~L~~~g 101 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRKNDFIYVTGG---NTFFLLQELKRTG 101 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHHSSEEEECCS---CHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHhCCEEEECCC---CHHHHHHHHHHCC
Confidence 45667775332 22234677788888888874 66663 33566688999999998753 222 2
Q ss_pred --HHHHHHHhcCCCEEEcCCC
Q 016053 373 --RITIEAMAFQLPVLVLSEL 391 (396)
Q Consensus 373 --~~~lEAma~G~PVI~t~~g 391 (396)
-.+-|+...|+|++.+..|
T Consensus 102 l~~~l~~~~~~G~p~~G~sAG 122 (206)
T 3l4e_A 102 ADKLILEEIAAGKLYIGESAG 122 (206)
T ss_dssp HHHHHHHHHHTTCEEEEETHH
T ss_pred hHHHHHHHHHcCCeEEEECHH
Confidence 3467888889999988654
No 220
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=50.98 E-value=22 Score=28.90 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=25.4
Q ss_pred ccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||||++|......+|.. .....+++.+. .|++|.++-
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~-~~~~v~~~d 39 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIG-DRAQVSYLS 39 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHT-TSSEEEECC
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcC-CCCEEEEEe
Confidence 46899998766556654 55555666665 689998876
No 221
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=50.95 E-value=19 Score=30.19 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=27.0
Q ss_pred ccEEEEEeccCCC----CChH-HHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSL----SGGP-LLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~----gG~~-~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|||||+|...... ++.. ..+..+.+.+.+.|++|.++..
T Consensus 25 M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 25 MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp CCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred CcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 4589988855432 3344 5555677778889999999874
No 222
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=50.84 E-value=36 Score=30.78 Aligned_cols=69 Identities=16% Similarity=0.045 Sum_probs=45.6
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHc--CEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI--DVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~a--Dv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.+++++... + .+++.++++.. |+++..+. ...-.-.+.+|+..|++
T Consensus 29 ~~~~l~av~d~------~~~~~~~~a~~~~~~~-~-----~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~aGkh 94 (359)
T 3m2t_A 29 QDIRIVAACDS------DLERARRVHRFISDIP-V-----LDNVPAMLNQVPLDAVVMAGP--PQLHFEMGLLAMSKGVN 94 (359)
T ss_dssp TTEEEEEEECS------SHHHHGGGGGTSCSCC-E-----ESSHHHHHHHSCCSEEEECSC--HHHHHHHHHHHHHTTCE
T ss_pred CCcEEEEEEcC------CHHHHHHHHHhcCCCc-c-----cCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCe
Confidence 68888755443 3355555665543221 1 26888999876 88887766 44445557899999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++-.
T Consensus 95 Vl~EK 99 (359)
T 3m2t_A 95 VFVEK 99 (359)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 99754
No 223
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=50.61 E-value=62 Score=28.19 Aligned_cols=32 Identities=16% Similarity=0.080 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.+.|++|.++..
T Consensus 29 k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 29 KVAFIT-----GAARGQGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 566676 34344567788999999999998863
No 224
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=50.38 E-value=22 Score=31.86 Aligned_cols=43 Identities=26% Similarity=0.192 Sum_probs=28.2
Q ss_pred ccccc-ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 69 LSFMK-SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 69 ~~~m~-~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.+.|+ ++|++++.+..+.+| +...++.+.|.+.|+++.+....
T Consensus 23 ~~~m~~~~~~~vi~Np~sg~~--~~~~~i~~~l~~~g~~~~~~~t~ 66 (332)
T 2bon_A 23 IQGMAEFPASLLILNGKSTDN--LPLREAIMLLREEGMTIHVRVTW 66 (332)
T ss_dssp -------CCEEEEECSSSTTC--HHHHHHHHHHHTTTCCEEEEECC
T ss_pred hhhhhhcceEEEEECCCCCCC--chHHHHHHHHHHcCCcEEEEEec
Confidence 34444 457888876555444 56778999999999999988644
No 225
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=50.23 E-value=53 Score=29.50 Aligned_cols=80 Identities=9% Similarity=0.045 Sum_probs=47.9
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. |..+....++.++...|.+|+++++..-...........+.....|..+........ .-.+.|
T Consensus 154 ~gl~va~vGD-----~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~e--av~~aD 226 (335)
T 1dxh_A 154 HDISYAYLGD-----ARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKE--AVKGVD 226 (335)
T ss_dssp GGCEEEEESC-----CSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHH--HTTTCS
T ss_pred CCeEEEEecC-----CccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHH--HhCCCC
Confidence 3468998874 224899999999999999999999765433222221122222244544432222221 125789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 227 vvytd~w 233 (335)
T 1dxh_A 227 FVHTDVW 233 (335)
T ss_dssp EEEECCC
T ss_pred EEEeCCc
Confidence 9988643
No 226
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=50.00 E-value=62 Score=30.02 Aligned_cols=86 Identities=14% Similarity=0.003 Sum_probs=50.9
Q ss_pred cccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
+.++|+++... ...|-+.++...++.++...|.+|+++++.+-...........+.....|..+........ ...+.
T Consensus 187 ~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~e--av~~A 264 (418)
T 2yfk_A 187 KGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAE--AFKDA 264 (418)
T ss_dssp TTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHH--HHTTC
T ss_pred CCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHH--HhcCC
Confidence 34689988632 3334446899999999999999999999764322222211112223334544433332222 12578
Q ss_pred cEEEEcCch
Q 016053 152 DLIVLNTAV 160 (396)
Q Consensus 152 DiV~~~~~~ 160 (396)
|+|+.....
T Consensus 265 DVVytd~W~ 273 (418)
T 2yfk_A 265 DVVYPKSWA 273 (418)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcccc
Confidence 999987644
No 227
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=49.86 E-value=18 Score=32.28 Aligned_cols=35 Identities=20% Similarity=0.079 Sum_probs=27.3
Q ss_pred EEEEEeccCCCCChH--HHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
||.-|+ .-||.. +...+|+.+|++.|++|.++-.+
T Consensus 49 KVIAIa---GKGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 49 KVFAVY---GKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp EEEEEE---CSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred eEEEEE---CCCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 555555 356665 89999999999999999999744
No 228
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=49.72 E-value=9.5 Score=31.32 Aligned_cols=36 Identities=8% Similarity=0.010 Sum_probs=27.4
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||||+|......++ ......+++.+++.|.+|.++-
T Consensus 2 mkiLiI~gsp~~~~-s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 2 PKTLIILAHPNISQ-STVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp CCEEEEECCTTGGG-CSHHHHHHHHHTTCTTTEEEEE
T ss_pred CEEEEEEeCCCccH-HHHHHHHHHHHHhCCCeEEEEE
Confidence 58998885444433 3678888889988999999987
No 229
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=49.66 E-value=18 Score=29.36 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=27.8
Q ss_pred cEEEEEeccCCC-CCh-HHHHHHHHHHHHhCC--CEEEEEec
Q 016053 75 KLVLLVSHELSL-SGG-PLLLMELAFLLRGVG--TKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~-~~~~~~l~~~L~~~G--~~V~vi~~ 112 (396)
||||+|...... +|. ......+++.+.+.| ++|.++-.
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 589998866553 343 477777888888876 99988873
No 230
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=49.51 E-value=52 Score=29.52 Aligned_cols=80 Identities=9% Similarity=-0.004 Sum_probs=47.9
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. |..+....++.++...|.+|+++++..-...........+.....|..+........ .-.+.|
T Consensus 154 ~gl~ia~vGD-----~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~e--av~~aD 226 (333)
T 1duv_G 154 NEMTLVYAGD-----ARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAK--GVEGAD 226 (333)
T ss_dssp GGCEEEEESC-----TTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHH--HHTTCS
T ss_pred CCcEEEEECC-----CccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHH--HhCCCC
Confidence 3468888874 224899999999999999999999765433222221122222345544433332222 125789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 227 vvytd~w 233 (333)
T 1duv_G 227 FIYTDVW 233 (333)
T ss_dssp EEEECCS
T ss_pred EEEeCCc
Confidence 9988643
No 231
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=49.21 E-value=25 Score=28.71 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=25.9
Q ss_pred cEEEEEeccCCCCC-hHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSG-GPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG-~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+||++..+ |+ +.....++++.|++.|++|.++...
T Consensus 2 k~IllgvT----Gs~aa~k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCIT----GASGVIYGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEEC----SSTTHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEE----CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 46666553 22 2367889999999999999998854
No 232
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=49.20 E-value=1.3e+02 Score=25.87 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=63.8
Q ss_pred EEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCcc---------chHHHHHHHHHHhcCCCCcEE
Q 016053 272 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ---------TKFESELRNYVMQKKIQDRVH 342 (396)
Q Consensus 272 ~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~---------~~~~~~l~~~~~~~~l~~~V~ 342 (396)
.++.+|- ......+.+++.+..+.+ -...++-.+.-.++. .+....+++..++.|++ +.
T Consensus 24 ~~vIAgp-c~~~~~e~a~~~a~~l~~---------~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~--~~ 91 (262)
T 1zco_A 24 FTIIAGP-CSIESREQIMKVAEFLAE---------VGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLV--TV 91 (262)
T ss_dssp CEEEEEC-SBCCCHHHHHHHHHHHHH---------TTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCE--EE
T ss_pred cEEEEeC-CCCCCHHHHHHHHHHHHH---------cCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCc--EE
Confidence 3444454 677778888888887765 244445444322111 33456778888888876 22
Q ss_pred EecC-cCCHHHHHHHcCEEEecCCCCCCCccHHHHH-HHhcCCCEEEcCCCC
Q 016053 343 FVNK-TLTVAPYLAAIDVLVQNSQAWGECFGRITIE-AMAFQLPVLVLSELH 392 (396)
Q Consensus 343 ~~g~-~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lE-Ama~G~PVI~t~~gG 392 (396)
--.+ ...+..+-..+|++=.+|. +.--..+++ +...|+||+.++...
T Consensus 92 te~~d~~~~~~l~~~vd~~kIga~---~~~n~~ll~~~a~~~kPV~lk~G~~ 140 (262)
T 1zco_A 92 TEVMDTRHVELVAKYSDILQIGAR---NSQNFELLKEVGKVENPVLLKRGMG 140 (262)
T ss_dssp EECCCGGGHHHHHHHCSEEEECGG---GTTCHHHHHHHTTSSSCEEEECCTT
T ss_pred EeeCCHHhHHHHHhhCCEEEECcc---cccCHHHHHHHHhcCCcEEEecCCC
Confidence 2222 2345555455899999997 333344454 445899999987654
No 233
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=48.61 E-value=26 Score=29.41 Aligned_cols=38 Identities=8% Similarity=0.089 Sum_probs=27.5
Q ss_pred ccEEEEEeccCC---CCChH-HHHHHHHHHHHhC--CC-EEEEEe
Q 016053 74 SKLVLLVSHELS---LSGGP-LLLMELAFLLRGV--GT-KVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~---~gG~~-~~~~~l~~~L~~~--G~-~V~vi~ 111 (396)
|||||+|..... .+|.. .....+++.+++. |+ +|.++-
T Consensus 4 MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 4 MNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp CCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 368999987665 45554 5566677788775 68 999887
No 234
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=48.60 E-value=21 Score=30.71 Aligned_cols=40 Identities=23% Similarity=0.171 Sum_probs=24.8
Q ss_pred CCcccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 67 ~~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++...++.| +.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 14 ~~~~~l~~k-~~lVT-----Gas~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 14 KEVFDLRGR-VALVT-----GGSRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp ---CCCTTC-EEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcCCCCC-EEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 333444444 45565 33334667788899999999988763
No 235
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=48.43 E-value=30 Score=26.26 Aligned_cols=40 Identities=8% Similarity=0.010 Sum_probs=27.8
Q ss_pred ccEEEEEeccCCCC-ChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLS-GGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~g-G~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|++++....+.+ ........++......|++|.++...
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 35777776543322 22367778888888899999998844
No 236
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=48.40 E-value=74 Score=26.83 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhh-----ccCCcEEEEcCc
Q 016053 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT-----ALKADLIVLNTA 159 (396)
Q Consensus 91 ~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~DiV~~~~~ 159 (396)
..=..+++++.++|++|++++..... ... ...++.++.......+.. ..+.|+++.+..
T Consensus 30 ~mG~aiA~~~~~~Ga~V~lv~~~~~~---------~~~-~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAA 93 (232)
T 2gk4_A 30 HLGKIITETLLSAGYEVCLITTKRAL---------KPE-PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMA 93 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTSC---------CCC-CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSB
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCccc---------ccc-CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCc
Confidence 56777899999999999999854321 000 012566666655433221 246788877654
No 237
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=48.39 E-value=18 Score=32.18 Aligned_cols=42 Identities=21% Similarity=-0.046 Sum_probs=24.6
Q ss_pred CCCcccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 66 ~~~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.++...+++|+|++.. |....=..+++.|.++|++|.++...
T Consensus 13 ~~~~~~~~~~~vlVTG------atG~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 13 GLVPRGSHMKKVFITG------ICGQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp --------CCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ceeeecCCCCEEEEeC------CccHHHHHHHHHHHHCCCEEEEEECC
Confidence 3455555667777553 33356677788888999999998743
No 238
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=48.36 E-value=29 Score=28.69 Aligned_cols=62 Identities=19% Similarity=0.137 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--hhhhh--ccCCcEEEEcCc
Q 016053 90 PLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--ETINT--ALKADLIVLNTA 159 (396)
Q Consensus 90 ~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~DiV~~~~~ 159 (396)
...-..+++.|.+.|++|+++..+.. . ........+..++.-... ..+.. ..++|+|++..+
T Consensus 9 G~~G~~la~~L~~~g~~v~vid~~~~-----~---~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 9 ETTAYYLARSMLSRKYGVVIINKDRE-----L---CEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCHH-----H---HHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CHHHHHHHHHHHhCCCeEEEEECCHH-----H---HHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 47788899999999999999974321 0 111112235555543322 22222 368999988774
No 239
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=48.32 E-value=30 Score=32.34 Aligned_cols=98 Identities=10% Similarity=0.041 Sum_probs=59.9
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCC-cEEEecC
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD-RVHFVNK 346 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~-~V~~~g~ 346 (396)
.+...|+++|-=.- |...+++++.+ .++++++-+-+. ..+..++.+++++.+. .+..
T Consensus 81 ~~~irigiIG~G~~--g~~~~~~~l~~-----------~~~~~lvav~d~------~~~~~~~~a~~~g~~~~~~~~--- 138 (433)
T 1h6d_A 81 DRRFGYAIVGLGKY--ALNQILPGFAG-----------CQHSRIEALVSG------NAEKAKIVAAEYGVDPRKIYD--- 138 (433)
T ss_dssp CCCEEEEEECCSHH--HHHTHHHHTTT-----------CSSEEEEEEECS------CHHHHHHHHHHTTCCGGGEEC---
T ss_pred CCceEEEEECCcHH--HHHHHHHHHhh-----------CCCcEEEEEEcC------CHHHHHHHHHHhCCCcccccc---
Confidence 34578888876110 11123333321 267887766553 3455666777777642 1222
Q ss_pred cCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 347 TLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 347 ~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
.++..+++. ..|+++..+. ...-.-.+.+|+..|++|++-.
T Consensus 139 ~~~~~~ll~~~~vD~V~iatp--~~~h~~~~~~al~aGk~Vl~EK 181 (433)
T 1h6d_A 139 YSNFDKIAKDPKIDAVYIILP--NSLHAEFAIRAFKAGKHVMCEK 181 (433)
T ss_dssp SSSGGGGGGCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred cCCHHHHhcCCCCCEEEEcCC--chhHHHHHHHHHHCCCcEEEcC
Confidence 245666776 6899988877 5555666789999999999753
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=48.29 E-value=34 Score=25.59 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=22.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
+++|+++. +| ..-..+++.|.+.|++|.++..
T Consensus 6 ~~~v~I~G-----~G--~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIG-----LG--RFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp CCSEEEEC-----CS--HHHHHHHHHHHHTTCCCEEEES
T ss_pred CCcEEEEC-----CC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 34677665 12 4556678888899999988763
No 241
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=48.22 E-value=60 Score=28.02 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=23.8
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 10 k~vlVT-----Gas~GIG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFIS-----GGSRGIGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEE-----SCSSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 566666 333345667899999999999888743
No 242
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=48.21 E-value=70 Score=29.01 Aligned_cols=56 Identities=11% Similarity=0.045 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCCCCcEEEecCcCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 326 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 326 ~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+..++.+++++.+. + ..++.++++. .|+++..+. ...-.-.+.+|+..|++|++=.
T Consensus 57 ~~a~~~a~~~~~~~-~-----~~~~~~ll~~~~iD~V~i~tp--~~~h~~~~~~al~~Gk~V~~EK 114 (383)
T 3oqb_A 57 EKVEALAKRFNIAR-W-----TTDLDAALADKNDTMFFDAAT--TQARPGLLTQAINAGKHVYCEK 114 (383)
T ss_dssp HHHHHHHHHTTCCC-E-----ESCHHHHHHCSSCCEEEECSC--SSSSHHHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHHhCCCc-c-----cCCHHHHhcCCCCCEEEECCC--chHHHHHHHHHHHCCCeEEEcC
Confidence 56677788887641 1 2678888887 788887766 4555556789999999999643
No 243
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=48.17 E-value=76 Score=30.13 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=49.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV 154 (396)
++|+++.- ||... ..+++.|.++|++|++.-.... +..+.+...|+.+..-..... ..++|+|
T Consensus 23 ~~v~viGi----G~sG~--s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~~---~~~~d~v 85 (494)
T 4hv4_A 23 RHIHFVGI----GGAGM--GGIAEVLANEGYQISGSDLAPN--------SVTQHLTALGAQIYFHHRPEN---VLDASVV 85 (494)
T ss_dssp CEEEEETT----TSTTH--HHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCEEESSCCGGG---GTTCSEE
T ss_pred CEEEEEEE----cHhhH--HHHHHHHHhCCCeEEEEECCCC--------HHHHHHHHCCCEEECCCCHHH---cCCCCEE
Confidence 57887762 33222 2358899999999998632211 133445666887754322222 2468999
Q ss_pred EEcC--chhhHHHHHHHhcCCCc
Q 016053 155 VLNT--AVAGKWLDAVLKEDVPR 175 (396)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~ 175 (396)
+... +.....+..+...++|.
T Consensus 86 V~Spgi~~~~p~~~~a~~~gi~v 108 (494)
T 4hv4_A 86 VVSTAISADNPEIVAAREARIPV 108 (494)
T ss_dssp EECTTSCTTCHHHHHHHHTTCCE
T ss_pred EECCCCCCCCHHHHHHHHCCCCE
Confidence 8776 33345556666666663
No 244
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=48.15 E-value=57 Score=28.79 Aligned_cols=69 Identities=10% Similarity=0.021 Sum_probs=46.8
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHH-HHcCEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYL-AAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~-~~aDv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
++++++-+-+. ..+..++.+++++.. .. ..+..+++ ..+|+++..+. ...-.-.+.+|+..|++|
T Consensus 24 ~~~~~~~v~d~------~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~D~V~i~tp--~~~h~~~~~~al~~gk~V 89 (325)
T 2ho3_A 24 GEYQLVAIYSR------KLETAATFASRYQNI---QL---FDQLEVFFKSSFDLVYIASP--NSLHFAQAKAALSAGKHV 89 (325)
T ss_dssp TSEEEEEEECS------SHHHHHHHGGGSSSC---EE---ESCHHHHHTSSCSEEEECSC--GGGHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEEeC------CHHHHHHHHHHcCCC---eE---eCCHHHHhCCCCCEEEEeCC--hHHHHHHHHHHHHcCCcE
Confidence 57887755443 335556677766532 11 25677788 67899988877 555556678999999999
Q ss_pred EEcC
Q 016053 386 LVLS 389 (396)
Q Consensus 386 I~t~ 389 (396)
++-.
T Consensus 90 ~~EK 93 (325)
T 2ho3_A 90 ILEK 93 (325)
T ss_dssp EEES
T ss_pred EEec
Confidence 9754
No 245
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=48.06 E-value=45 Score=30.27 Aligned_cols=78 Identities=8% Similarity=0.029 Sum_probs=47.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
..+|+++.. +-.++...++.++...|.+|+++++..-.................|..+......... ..+.|+
T Consensus 181 gl~ia~vGD-----~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~ea--v~~aDv 253 (358)
T 4h31_A 181 DIQFAYLGD-----ARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEG--VQGCDF 253 (358)
T ss_dssp GCEEEEESC-----TTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHH--HTTCSE
T ss_pred ceEEEecCC-----CCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHH--hccCcE
Confidence 458998874 2237999999999999999999997654333333322333334445555433333222 246788
Q ss_pred EEEcC
Q 016053 154 IVLNT 158 (396)
Q Consensus 154 V~~~~ 158 (396)
|+...
T Consensus 254 vyt~~ 258 (358)
T 4h31_A 254 LYTDV 258 (358)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 88643
No 246
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.01 E-value=29 Score=26.37 Aligned_cols=69 Identities=19% Similarity=0.191 Sum_probs=43.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--hhhhh--ccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--ETINT--ALK 150 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~ 150 (396)
++|+++. .| +.-..+++.|.+.|++|+++..+.. ..+.+...|+.++.-... ..+.. ..+
T Consensus 8 ~~viIiG-----~G--~~G~~la~~L~~~g~~v~vid~~~~---------~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVG-----YG--RVGSLLGEKLLASDIPLVVIETSRT---------RVDELRERGVRAVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp SCEEEEC-----CS--HHHHHHHHHHHHTTCCEEEEESCHH---------HHHHHHHTTCEEEESCTTSHHHHHHTTGGG
T ss_pred CCEEEEC-----cC--HHHHHHHHHHHHCCCCEEEEECCHH---------HHHHHHHcCCCEEECCCCCHHHHHhcCccc
Confidence 3677665 23 6778889999999999999975422 122333457766544322 22222 357
Q ss_pred CcEEEEcCc
Q 016053 151 ADLIVLNTA 159 (396)
Q Consensus 151 ~DiV~~~~~ 159 (396)
+|+|++..+
T Consensus 72 ad~vi~~~~ 80 (140)
T 3fwz_A 72 AKWLILTIP 80 (140)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEECC
Confidence 899987764
No 247
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=47.80 E-value=7.7 Score=31.87 Aligned_cols=39 Identities=10% Similarity=-0.040 Sum_probs=24.4
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEE-EEe
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN-WIT 111 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~-vi~ 111 (396)
++|||++|......++....+.+.+..+.+.|++|. ++-
T Consensus 3 ~~mkil~I~GS~r~~s~t~~l~~~~~~~~~~g~~v~~~id 42 (193)
T 3svl_A 3 EKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPS 42 (193)
T ss_dssp -CEEEEEEECCCSTTCHHHHHHHHGGGTSCTTEEEEECCC
T ss_pred CCCEEEEEEccCCCCCHHHHHHHHHHHHccCCCEEEEEEe
Confidence 457999998776666655444443333344688988 554
No 248
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=47.76 E-value=23 Score=28.48 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=24.9
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+.|+|++.. |....=..+++.|.++|++|.++...
T Consensus 2 ~~~~ilVtG------atG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 2 AVKKIAIFG------ATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEc------CCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 335777553 33356677888899999999998743
No 249
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=47.75 E-value=29 Score=29.71 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=31.8
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+|+.++|+......|=......|+++|+++|++|..+=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 35778888777777777888999999999999999875
No 250
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=47.62 E-value=26 Score=29.78 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=28.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+++.+.+.-...|-.....+|+.+|+++|++|.++-.+
T Consensus 3 ~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 3 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 45555543333455689999999999999999998743
No 251
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=47.60 E-value=80 Score=23.60 Aligned_cols=71 Identities=18% Similarity=0.107 Sum_probs=40.6
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++++++++.. | .....+++.|.+ .||++.-+....+. . ......|++++.......+....++
T Consensus 3 ~~~~vlIiGa----G---~~g~~l~~~l~~~~g~~vvg~~d~~~~--------~-~g~~i~g~pV~g~~~l~~~~~~~~i 66 (141)
T 3nkl_A 3 AKKKVLIYGA----G---SAGLQLANMLRQGKEFHPIAFIDDDRK--------K-HKTTMQGITIYRPKYLERLIKKHCI 66 (141)
T ss_dssp CCEEEEEECC----S---HHHHHHHHHHHHSSSEEEEEEECSCGG--------G-TTCEETTEEEECGGGHHHHHHHHTC
T ss_pred CCCEEEEECC----C---HHHHHHHHHHHhCCCcEEEEEEECCcc--------c-CCCEecCeEEECHHHHHHHHHHCCC
Confidence 3457887762 3 244455555655 48998887754331 0 0111247777763334445556788
Q ss_pred cEEEEcCc
Q 016053 152 DLIVLNTA 159 (396)
Q Consensus 152 DiV~~~~~ 159 (396)
|.|++..+
T Consensus 67 d~viia~~ 74 (141)
T 3nkl_A 67 STVLLAVP 74 (141)
T ss_dssp CEEEECCT
T ss_pred CEEEEeCC
Confidence 98887664
No 252
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=47.56 E-value=96 Score=27.48 Aligned_cols=83 Identities=12% Similarity=-0.009 Sum_probs=48.4
Q ss_pred CcccccccEEEEEeccCCCCChHHHHH-HHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhh
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLM-ELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETI 145 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~-~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
..++|+++||.+|.. |. .-. ..++.|++ .+.++..++..... ..+++.+ .....+
T Consensus 19 ~~~~M~~~rvgiiG~----G~---ig~~~~~~~l~~~~~~~lvav~d~~~~--------------~~g~~~~--~~~~~l 75 (330)
T 4ew6_A 19 YFQSMSPINLAIVGV----GK---IVRDQHLPSIAKNANFKLVATASRHGT--------------VEGVNSY--TTIEAM 75 (330)
T ss_dssp CCCCCCCEEEEEECC----SH---HHHHTHHHHHHHCTTEEEEEEECSSCC--------------CTTSEEE--SSHHHH
T ss_pred ccccCCCceEEEEec----CH---HHHHHHHHHHHhCCCeEEEEEEeCChh--------------hcCCCcc--CCHHHH
Confidence 345677789999983 22 222 34555555 47888877754432 1244432 344455
Q ss_pred hhc-cCCcEEEEcCchhh--HHHHHHHhcCC
Q 016053 146 NTA-LKADLIVLNTAVAG--KWLDAVLKEDV 173 (396)
Q Consensus 146 ~~~-~~~DiV~~~~~~~~--~~~~~~~~~~~ 173 (396)
... .++|+|++.++... .+...+...+.
T Consensus 76 l~~~~~vD~V~i~tp~~~H~~~~~~al~aGk 106 (330)
T 4ew6_A 76 LDAEPSIDAVSLCMPPQYRYEAAYKALVAGK 106 (330)
T ss_dssp HHHCTTCCEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HhCCCCCCEEEEeCCcHHHHHHHHHHHHcCC
Confidence 555 78999998886443 34445555663
No 253
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=47.53 E-value=1.2e+02 Score=28.25 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=48.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--------hhhh-
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--------ETIN- 146 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~- 146 (396)
.|+++.. ...|=.+.+..|+.+|+++|++|.+++.+.... .....+.......+++++..... ..+.
T Consensus 102 vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~--aa~eqL~~~~~~~gvpv~~~~~~~dp~~i~~~al~~ 177 (443)
T 3dm5_A 102 ILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP--GAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDY 177 (443)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST--HHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHHHHH
T ss_pred EEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch--hHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHHHHH
Confidence 4554443 335556889999999999999999998543321 11222333344557777654321 1111
Q ss_pred -hccCCcEEEEcCc
Q 016053 147 -TALKADLIVLNTA 159 (396)
Q Consensus 147 -~~~~~DiV~~~~~ 159 (396)
...++|+|++.++
T Consensus 178 a~~~~~DvVIIDTa 191 (443)
T 3dm5_A 178 FKSKGVDIIIVDTA 191 (443)
T ss_dssp HHHTTCSEEEEECC
T ss_pred HHhCCCCEEEEECC
Confidence 2256999998774
No 254
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=47.50 E-value=1.1e+02 Score=29.14 Aligned_cols=89 Identities=15% Similarity=0.222 Sum_probs=52.1
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
.+.++|.|+. .|| .-+..+++.|.++|++|++.-..... +..+.+...|+.+..-.....+ ..++
T Consensus 17 ~~~~~i~~iG----iGg--~Gms~lA~~l~~~G~~V~~sD~~~~~-------~~~~~L~~~gi~~~~G~~~~~~--~~~~ 81 (524)
T 3hn7_A 17 FQGMHIHILG----ICG--TFMGSLALLARALGHTVTGSDANIYP-------PMSTQLEQAGVTIEEGYLIAHL--QPAP 81 (524)
T ss_dssp --CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESCCCT-------THHHHHHHTTCEEEESCCGGGG--CSCC
T ss_pred ecCCEEEEEE----ecH--hhHHHHHHHHHhCCCEEEEECCCCCc-------HHHHHHHHCCCEEECCCCHHHc--CCCC
Confidence 3446777765 244 45667889999999999886533211 1334455668877643222222 2468
Q ss_pred cEEEEcC--chhhHHHHHHHhcCCCc
Q 016053 152 DLIVLNT--AVAGKWLDAVLKEDVPR 175 (396)
Q Consensus 152 DiV~~~~--~~~~~~~~~~~~~~~~~ 175 (396)
|+|+... +.....+..+...++|.
T Consensus 82 d~vV~Spgi~~~~p~l~~a~~~gi~v 107 (524)
T 3hn7_A 82 DLVVVGNAMKRGMDVIEYMLDTGLRY 107 (524)
T ss_dssp SEEEECTTCCTTSHHHHHHHHHTCCE
T ss_pred CEEEECCCcCCCCHHHHHHHHCCCcE
Confidence 9998775 33345556666666654
No 255
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=47.45 E-value=10 Score=30.84 Aligned_cols=38 Identities=21% Similarity=0.092 Sum_probs=23.6
Q ss_pred cccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEe
Q 016053 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~ 111 (396)
++|||+++......+|.. ..+..+++.+. .|++|.++-
T Consensus 5 ~~Mkilii~gS~r~~g~t~~la~~i~~~l~-~g~~v~~~d 43 (193)
T 1rtt_A 5 DDIKVLGISGSLRSGSYNSAALQEAIGLVP-PGMSIELAD 43 (193)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHTTCC-TTCEEEECC
T ss_pred CCceEEEEECCCCCCChHHHHHHHHHHhcc-CCCeEEEEe
Confidence 346899998665555543 44444455555 589998876
No 256
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=47.28 E-value=47 Score=27.96 Aligned_cols=33 Identities=15% Similarity=-0.056 Sum_probs=23.8
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 14 k~vlIT-----Gas~giG~~ia~~l~~~G~~v~~~~~~ 46 (256)
T 3ezl_A 14 RIAYVT-----GGMGGIGTSICQRLHKDGFRVVAGCGP 46 (256)
T ss_dssp EEEEET-----TTTSHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 555566 344456678899999999999887733
No 257
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=47.02 E-value=74 Score=22.55 Aligned_cols=71 Identities=11% Similarity=0.019 Sum_probs=38.3
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCC-CEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--hhhhh-hcc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--QETIN-TAL 149 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 149 (396)
+++|+++.. | ..-..+++.|.+.| ++|.++..... -.+.+...++..+.... ...+. ...
T Consensus 5 ~~~v~I~G~----G---~iG~~~~~~l~~~g~~~v~~~~r~~~---------~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 5 RWNICVVGA----G---KIGQMIAALLKTSSNYSVTVADHDLA---------ALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp CEEEEEECC----S---HHHHHHHHHHHHCSSEEEEEEESCHH---------HHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred cCeEEEECC----C---HHHHHHHHHHHhCCCceEEEEeCCHH---------HHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 357887751 3 34556778888899 99887764321 11111233444443322 12222 124
Q ss_pred CCcEEEEcCch
Q 016053 150 KADLIVLNTAV 160 (396)
Q Consensus 150 ~~DiV~~~~~~ 160 (396)
++|+|+...+.
T Consensus 69 ~~d~vi~~~~~ 79 (118)
T 3ic5_A 69 GFDAVISAAPF 79 (118)
T ss_dssp TCSEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 78999877653
No 258
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=46.92 E-value=15 Score=33.38 Aligned_cols=41 Identities=12% Similarity=-0.083 Sum_probs=26.7
Q ss_pred ccccEEEEEeccCCCC-ChH-HHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLS-GGP-LLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~g-G~~-~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|++|||+++....+.- -.. +...+++++|++.||+|..+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 7788999997322110 001 2345678999999999998863
No 259
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=46.76 E-value=42 Score=30.18 Aligned_cols=93 Identities=11% Similarity=0.014 Sum_probs=58.7
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 348 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~ 348 (396)
.+..++++|-=.- |...++.++.. .++++++-+-+. ..+..++.+++++++. .+
T Consensus 26 ~~~rigiIG~G~~--g~~~~~~~l~~-----------~~~~~l~av~d~------~~~~~~~~a~~~g~~~-------~~ 79 (350)
T 3rc1_A 26 NPIRVGVIGCADI--AWRRALPALEA-----------EPLTEVTAIASR------RWDRAKRFTERFGGEP-------VE 79 (350)
T ss_dssp CCEEEEEESCCHH--HHHTHHHHHHH-----------CTTEEEEEEEES------SHHHHHHHHHHHCSEE-------EE
T ss_pred CceEEEEEcCcHH--HHHHHHHHHHh-----------CCCeEEEEEEcC------CHHHHHHHHHHcCCCC-------cC
Confidence 4577888886211 11123444433 168888755443 3456667777776531 25
Q ss_pred CHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 349 TVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 349 ~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
++.+++. ..|+++..+. ...-.-.+.+|+..|++|++=.
T Consensus 80 ~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~Vl~EK 120 (350)
T 3rc1_A 80 GYPALLERDDVDAVYVPLP--AVLHAEWIDRALRAGKHVLAEK 120 (350)
T ss_dssp SHHHHHTCTTCSEEEECCC--GGGHHHHHHHHHHTTCEEEEES
T ss_pred CHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHHCCCcEEEeC
Confidence 7788887 4799888776 5555556789999999998743
No 260
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=46.75 E-value=8.2 Score=35.18 Aligned_cols=42 Identities=17% Similarity=0.015 Sum_probs=27.1
Q ss_pred ccccEEEEEeccCCCC-Ch-HHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLS-GG-PLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~g-G~-~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|++|||+++....+.- .. -.....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 5567899998422210 00 134577899999999999998743
No 261
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=46.67 E-value=67 Score=28.78 Aligned_cols=69 Identities=10% Similarity=0.094 Sum_probs=48.3
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.+++++.+. .++..+++. ..|+++..+. ...-.-.+.+|+..|++
T Consensus 28 ~~~~lvav~d~------~~~~~~~~~~~~g~~~-------~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~ 92 (354)
T 3db2_A 28 EKLKLVTCYSR------TEDKREKFGKRYNCAG-------DATMEALLAREDVEMVIITVP--NDKHAEVIEQCARSGKH 92 (354)
T ss_dssp SSEEEEEEECS------SHHHHHHHHHHHTCCC-------CSSHHHHHHCSSCCEEEECSC--TTSHHHHHHHHHHTTCE
T ss_pred CCcEEEEEECC------CHHHHHHHHHHcCCCC-------cCCHHHHhcCCCCCEEEEeCC--hHHHHHHHHHHHHcCCE
Confidence 68887755543 3456667777776541 367888884 5888888776 45445567899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-.-
T Consensus 93 vl~EKP 98 (354)
T 3db2_A 93 IYVEKP 98 (354)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 998553
No 262
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=46.49 E-value=19 Score=28.55 Aligned_cols=36 Identities=19% Similarity=0.052 Sum_probs=23.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++|||.+-+. .+| -..-..+.+.|.++||+|.=+.
T Consensus 1 m~~MkIaigsD---haG-~~lK~~i~~~L~~~G~eV~D~G 36 (162)
T 2vvp_A 1 MSGMRVYLGAD---HAG-YELKQRIIEHLKQTGHEPIDCG 36 (162)
T ss_dssp --CCEEEEEEC---HHH-HHHHHHHHHHHHHTTCEEEECS
T ss_pred CCCCEEEEEeC---chh-HHHHHHHHHHHHHCCCEEEEeC
Confidence 34468877662 233 3455568889999999998775
No 263
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=46.46 E-value=31 Score=28.97 Aligned_cols=37 Identities=8% Similarity=-0.023 Sum_probs=30.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|+.++|+......|=......|+++|+++|++|..+=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4677788766667777888999999999999998864
No 264
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=46.17 E-value=27 Score=27.38 Aligned_cols=38 Identities=16% Similarity=0.078 Sum_probs=28.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|||+++... ..|..+.....+++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~S-~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLS-DYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECT-TSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEEC-CChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 467766632 24777799999999999999999888643
No 265
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=45.92 E-value=32 Score=30.97 Aligned_cols=86 Identities=7% Similarity=-0.025 Sum_probs=48.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
||+++||.+|.. |. .-...++.|.+. |+++..++...+. . ........++.. ......+....
T Consensus 2 M~~~~~vgiiG~-----G~--~g~~~~~~l~~~~~~~lvav~d~~~~----~---~~~~~~~~g~~~--~~~~~~~l~~~ 65 (354)
T 3db2_A 2 MYNPVGVAAIGL-----GR--WAYVMADAYTKSEKLKLVTCYSRTED----K---REKFGKRYNCAG--DATMEALLARE 65 (354)
T ss_dssp CCCCEEEEEECC-----SH--HHHHHHHHHTTCSSEEEEEEECSSHH----H---HHHHHHHHTCCC--CSSHHHHHHCS
T ss_pred CCCcceEEEEcc-----CH--HHHHHHHHHHhCCCcEEEEEECCCHH----H---HHHHHHHcCCCC--cCCHHHHhcCC
Confidence 456679999983 31 334567777775 7888777654321 1 111112224433 33445555567
Q ss_pred CCcEEEEcCchhh--HHHHHHHhcC
Q 016053 150 KADLIVLNTAVAG--KWLDAVLKED 172 (396)
Q Consensus 150 ~~DiV~~~~~~~~--~~~~~~~~~~ 172 (396)
++|+|++.+|... .....+...+
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~g 90 (354)
T 3db2_A 66 DVEMVIITVPNDKHAEVIEQCARSG 90 (354)
T ss_dssp SCCEEEECSCTTSHHHHHHHHHHTT
T ss_pred CCCEEEEeCChHHHHHHHHHHHHcC
Confidence 8999998886433 2334455555
No 266
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=45.64 E-value=1.4e+02 Score=25.24 Aligned_cols=36 Identities=8% Similarity=0.154 Sum_probs=25.0
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
++...+++.++. .-..+.+.+++.|+.+.|.++|+-
T Consensus 189 ~~~~ai~~~~d~-----~a~g~~~al~~~G~~~di~vvg~d 224 (289)
T 3brs_A 189 PDISVMVGLNQY-----SATGAARAIKDMSLEAKVKLVCID 224 (289)
T ss_dssp TTEEEEEESSHH-----HHHHHHHHHHHTTCTTTSEEEEEE
T ss_pred CCceEEEECCCc-----chHHHHHHHHhcCCCCCEEEEEEC
Confidence 678888887642 334456677788887778888874
No 267
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=45.59 E-value=19 Score=32.96 Aligned_cols=41 Identities=15% Similarity=-0.046 Sum_probs=27.8
Q ss_pred ccccEEEEEeccCCCCChH---HHHHHHHHHH-HhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGP---LLLMELAFLL-RGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~---~~~~~l~~~L-~~~G~~V~vi~~~ 113 (396)
|++|||+++....+.- .+ ....+++++| .+.||+|..+...
T Consensus 1 m~k~~v~vl~gG~s~E-~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSE-HDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTT-HHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCC-cceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 4567999998532220 11 3468889999 9999999998743
No 268
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=45.53 E-value=22 Score=31.49 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=28.3
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++||+++..... +.+.....++.+.|+++|++|.+...
T Consensus 4 m~ki~iI~n~~~-~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGR-DEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSG-GGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCC-HHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 468998886544 33457889999999999999887653
No 269
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=45.52 E-value=89 Score=27.38 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=23.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+|++.. |....=..+++.|.++|++|.++...
T Consensus 14 M~ilVtG------atG~iG~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLG------ATGLLGHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CEEEEES------TTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 4776553 33456677788888899999998744
No 270
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=45.33 E-value=28 Score=29.63 Aligned_cols=34 Identities=18% Similarity=0.018 Sum_probs=24.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 7 ~k~vlVT-----Gas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALIT-----AGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCEEEET-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCEEEEe-----CCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 3556666 444456678899999999999988644
No 271
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=45.16 E-value=67 Score=29.88 Aligned_cols=94 Identities=11% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCCcccccccEEEEEeccCCCCChHHHHH-HHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceE---EEEcC
Q 016053 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLM-ELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ---VISAK 140 (396)
Q Consensus 66 ~~~~~~m~~~kIl~v~~~~~~gG~~~~~~-~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 140 (396)
+.|...|+++||.+|.. | ..-. .+++.|.+. ++++..++...+. . ........++. +....
T Consensus 75 ~~~~~~~~~irigiIG~-----G--~~g~~~~~~~l~~~~~~~lvav~d~~~~----~---~~~~a~~~g~~~~~~~~~~ 140 (433)
T 1h6d_A 75 IRPMPEDRRFGYAIVGL-----G--KYALNQILPGFAGCQHSRIEALVSGNAE----K---AKIVAAEYGVDPRKIYDYS 140 (433)
T ss_dssp SSCCCCCCCEEEEEECC-----S--HHHHHTHHHHTTTCSSEEEEEEECSCHH----H---HHHHHHHTTCCGGGEECSS
T ss_pred CCCCCCCCceEEEEECC-----c--HHHHHHHHHHHhhCCCcEEEEEEcCCHH----H---HHHHHHHhCCCcccccccC
Confidence 34566777889999873 2 2232 456666654 6777766644321 1 11111122322 11223
Q ss_pred chhhhhhccCCcEEEEcCchhh--HHHHHHHhcCC
Q 016053 141 GQETINTALKADLIVLNTAVAG--KWLDAVLKEDV 173 (396)
Q Consensus 141 ~~~~~~~~~~~DiV~~~~~~~~--~~~~~~~~~~~ 173 (396)
....+....++|+|++.++... .+...+...+.
T Consensus 141 ~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk 175 (433)
T 1h6d_A 141 NFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGK 175 (433)
T ss_dssp SGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCC
Confidence 3445555568999998886443 23444555553
No 272
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=44.97 E-value=24 Score=33.27 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=31.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccC
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQK 114 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~ 114 (396)
+++|+++. ....|.-.-+.+|++.|.++ ||+|++++...
T Consensus 9 ~~~vv~~p--~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFIP--APGIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEEC--CSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEEc--CcccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 35788776 34467779999999999998 99999998553
No 273
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=44.86 E-value=40 Score=30.53 Aligned_cols=89 Identities=12% Similarity=0.030 Sum_probs=46.6
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcc-eEEEEcCchhhhhhc
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG-VQVISAKGQETINTA 148 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (396)
.||+++||.+|... ..| ...++..+...|+++..++...+. . ........+ ...+ .....+...
T Consensus 22 ~Mm~~irvgiiG~G--~~~----~~~~~~~~~~~~~~lvav~d~~~~----~---a~~~a~~~~~~~~~--~~~~~ll~~ 86 (361)
T 3u3x_A 22 SMMDELRFAAVGLN--HNH----IYGQVNCLLRAGARLAGFHEKDDA----L---AAEFSAVYADARRI--ATAEEILED 86 (361)
T ss_dssp ----CCEEEEECCC--STT----HHHHHHHHHHTTCEEEEEECSCHH----H---HHHHHHHSSSCCEE--SCHHHHHTC
T ss_pred hhccCcEEEEECcC--HHH----HHHHHHHhhcCCcEEEEEEcCCHH----H---HHHHHHHcCCCccc--CCHHHHhcC
Confidence 45677899999842 122 123445555688998888855331 1 111111222 2222 344555666
Q ss_pred cCCcEEEEcCchhhH--HHHHHHhcCC
Q 016053 149 LKADLIVLNTAVAGK--WLDAVLKEDV 173 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~--~~~~~~~~~~ 173 (396)
.++|+|++.+|.... +...+...+.
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~aGk 113 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQHGK 113 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCC
Confidence 789999998875433 4445555663
No 274
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=44.73 E-value=69 Score=28.54 Aligned_cols=70 Identities=11% Similarity=0.097 Sum_probs=48.7
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.+++++.. ++ .++..+++. .+|+++..+. ...-.-.+.+|+..|++
T Consensus 25 ~~~~l~av~d~------~~~~~~~~~~~~~~~-~~-----~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~ 90 (344)
T 3ezy_A 25 DDAILYAISDV------REDRLREMKEKLGVE-KA-----YKDPHELIEDPNVDAVLVCSS--TNTHSELVIACAKAKKH 90 (344)
T ss_dssp TTEEEEEEECS------CHHHHHHHHHHHTCS-EE-----ESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEECC------CHHHHHHHHHHhCCC-ce-----eCCHHHHhcCCCCCEEEEcCC--CcchHHHHHHHHhcCCe
Confidence 67887755443 345566677777643 11 367888888 7899988777 55555567899999999
Q ss_pred EEEcCC
Q 016053 385 VLVLSE 390 (396)
Q Consensus 385 VI~t~~ 390 (396)
|++-.-
T Consensus 91 v~~EKP 96 (344)
T 3ezy_A 91 VFCEKP 96 (344)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 997543
No 275
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=44.73 E-value=27 Score=28.80 Aligned_cols=71 Identities=14% Similarity=-0.030 Sum_probs=38.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
|+|+||+++...... . .-+...++.|.+. |++|.+++..+. - ....|+.+......... ...
T Consensus 1 M~m~kV~ill~~g~~-~--~E~~~~~~~l~~~~~~~v~~vs~~~~-V-----------~~~~G~~v~~d~~l~~~--~~~ 63 (206)
T 3f5d_A 1 MSLKKALFLILDQYA-D--WEGVYLASALNQREDWSVHTVSLDPI-V-----------SSIGGFKTSVDYIIGLE--PAN 63 (206)
T ss_dssp --CEEEEEECCSSBC-T--TTSHHHHHHHHTSTTEEEEEEESSSE-E-----------EBTTSCEEECSEETTSS--CSC
T ss_pred CCccEEEEEEcCCCc-H--HHHHHHHHHHhccCCeEEEEEECCCC-E-----------EecCCcEEecCcChhhC--CcC
Confidence 456788888643111 1 2233456667776 999999986532 0 11235555433322222 247
Q ss_pred CcEEEEcCc
Q 016053 151 ADLIVLNTA 159 (396)
Q Consensus 151 ~DiV~~~~~ 159 (396)
+|+|++...
T Consensus 64 ~D~livpGG 72 (206)
T 3f5d_A 64 FNLLVMIGG 72 (206)
T ss_dssp CSEEEECCB
T ss_pred CCEEEEcCC
Confidence 899988653
No 276
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=44.72 E-value=24 Score=31.21 Aligned_cols=39 Identities=13% Similarity=-0.128 Sum_probs=27.7
Q ss_pred cccEEEEEeccCCC--CChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 73 KSKLVLLVSHELSL--SGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 73 ~~~kIl~v~~~~~~--gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+++||+++....+. ...-.....++++|++.||+|..+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEe
Confidence 45689999843222 1111467889999999999999987
No 277
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.67 E-value=25 Score=29.02 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=25.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|+|++. ||....=..+++.|.++|++|.++...
T Consensus 4 m~~ilIt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI------GASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE------TCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE------cCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 3577654 444567778899999999999998743
No 278
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=44.48 E-value=30 Score=29.60 Aligned_cols=39 Identities=21% Similarity=0.109 Sum_probs=28.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++++.+.+.-...|-.....+|+.+|+++|++|.++-.+
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 355555543333455589999999999999999988643
No 279
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=44.30 E-value=69 Score=28.40 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=45.0
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
|+++||.+|... ..| ...++..|...|+++..++...+..... +.+.+ .+... ......+....++
T Consensus 2 M~~~rvgiiG~G--~~~----~~~~~~~l~~~~~~lvav~d~~~~~~~~----~a~~~--~~~~~--~~~~~~ll~~~~~ 67 (336)
T 2p2s_A 2 MKKIRFAAIGLA--HNH----IYDMCQQLIDAGAELAGVFESDSDNRAK----FTSLF--PSVPF--AASAEQLITDASI 67 (336)
T ss_dssp --CCEEEEECCS--STH----HHHHHHHHHHTTCEEEEEECSCTTSCHH----HHHHS--TTCCB--CSCHHHHHTCTTC
T ss_pred CCccEEEEECCC--hHH----HHHhhhhhcCCCcEEEEEeCCCHHHHHH----HHHhc--CCCcc--cCCHHHHhhCCCC
Confidence 667899999741 112 1234555666789988777554321111 11111 12221 2234455555689
Q ss_pred cEEEEcCchhhH--HHHHHHhcC
Q 016053 152 DLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 152 DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
|+|++.+|.... +...+.+.+
T Consensus 68 D~V~i~tp~~~h~~~~~~al~aG 90 (336)
T 2p2s_A 68 DLIACAVIPCDRAELALRTLDAG 90 (336)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTT
T ss_pred CEEEEeCChhhHHHHHHHHHHCC
Confidence 999998865432 334455555
No 280
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=44.14 E-value=22 Score=31.04 Aligned_cols=39 Identities=10% Similarity=-0.050 Sum_probs=26.3
Q ss_pred ccEEEEEeccCCCCChHH---HHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPL---LLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~---~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|+|+++....+. ..+. ....+++++++.||+|.++...
T Consensus 2 ~~~i~il~gg~s~-e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 4689988732211 0111 4468999999999999988744
No 281
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=44.04 E-value=74 Score=28.13 Aligned_cols=77 Identities=8% Similarity=0.014 Sum_probs=45.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
..+|+++.. + .+....++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|+
T Consensus 146 gl~va~vGD-----~-~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~e--av~~aDv 217 (307)
T 3tpf_A 146 IAKVAFIGD-----S-NNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFE--ALKDKDV 217 (307)
T ss_dssp CCEEEEESC-----S-SHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHH--HHTTCSE
T ss_pred CCEEEEEcC-----C-CccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHH--HhcCCCE
Confidence 568999875 1 4789999999999999999999765433222211111112233444432222221 1256788
Q ss_pred EEEcC
Q 016053 154 IVLNT 158 (396)
Q Consensus 154 V~~~~ 158 (396)
|+...
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88754
No 282
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=43.94 E-value=29 Score=27.00 Aligned_cols=82 Identities=13% Similarity=0.065 Sum_probs=40.7
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh--hc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TA 148 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 148 (396)
.+++++||||+.... .-......+++.+...+++|.-..........+ ...+.+.+.|+++-.. ..+.+. ..
T Consensus 17 ~~~~~~VLFVC~gN~--cRSpmAEal~~~~~~~~~~v~SAGt~~g~~~dp---~a~~vl~e~Gidis~h-~ar~l~~~~~ 90 (148)
T 3rh0_A 17 GSHMKSVLFVCVGNG--GKSQMAAALAQKYASDSVEIHSAGTKPAQGLNQ---LSVESIAEVGADMSQG-IPKAIDPELL 90 (148)
T ss_dssp ---CCEEEEEESSSS--SHHHHHHHHHHHHCCTTSEEEEEESSCCSSCCH---HHHHHHHHTTCCCTTC-CCCBCCHHHH
T ss_pred cCCCCEEEEECCCch--hHHHHHHHHHHHhcCCCEEEEecccCCCCCCCH---HHHHHHHHcCCCcCCC-eeeECCHHHh
Confidence 344579999996432 223566667777665556666544332221122 1233445567654211 112221 12
Q ss_pred cCCcEEEEcC
Q 016053 149 LKADLIVLNT 158 (396)
Q Consensus 149 ~~~DiV~~~~ 158 (396)
.++|+|++-+
T Consensus 91 ~~~DlIitM~ 100 (148)
T 3rh0_A 91 RTVDRVVILG 100 (148)
T ss_dssp HHCSEEEEES
T ss_pred cCCCEEEEec
Confidence 4689998754
No 283
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=43.84 E-value=60 Score=29.50 Aligned_cols=79 Identities=13% Similarity=0.034 Sum_probs=46.4
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCC--chhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE--EDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
+.++|+++.... .++...++.++...|.+|.++++..-.. .........+.....|..+........ .-.+
T Consensus 179 ~glkva~vGD~~-----nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~e--av~~ 251 (365)
T 4amu_A 179 KNKKIVFIGDYK-----NNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKIL--AAQD 251 (365)
T ss_dssp TTCEEEEESSTT-----SHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHH--HTTT
T ss_pred CCCEEEEECCCC-----cchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHH--HhcC
Confidence 456899887421 2578999999999999999999764322 122211122223344544433322221 2257
Q ss_pred CcEEEEcC
Q 016053 151 ADLIVLNT 158 (396)
Q Consensus 151 ~DiV~~~~ 158 (396)
.|+|+...
T Consensus 252 aDVVytd~ 259 (365)
T 4amu_A 252 ADVIYTDV 259 (365)
T ss_dssp CSEEEECC
T ss_pred CCEEEecc
Confidence 89999854
No 284
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=43.58 E-value=51 Score=28.88 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=43.8
Q ss_pred cccccEEEEEeccCCCCChHHHHH-HHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLM-ELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA 148 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~-~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (396)
+|+++||.+|.. | ..-. .+++.|.+ .|+++..++...+. . ........++.. ......+..
T Consensus 3 ~M~~~~igiIG~-----G--~~g~~~~~~~l~~~~~~~l~av~d~~~~----~---~~~~a~~~~~~~--~~~~~~ll~- 65 (308)
T 3uuw_A 3 AMKNIKMGMIGL-----G--SIAQKAYLPILTKSERFEFVGAFTPNKV----K---REKICSDYRIMP--FDSIESLAK- 65 (308)
T ss_dssp --CCCEEEEECC-----S--HHHHHHTHHHHTSCSSSEEEEEECSCHH----H---HHHHHHHHTCCB--CSCHHHHHT-
T ss_pred ccccCcEEEEec-----C--HHHHHHHHHHHHhCCCeEEEEEECCCHH----H---HHHHHHHcCCCC--cCCHHHHHh-
Confidence 577789999973 3 2233 25566666 57888877654321 1 111112223332 233334443
Q ss_pred cCCcEEEEcCchhhH--HHHHHHhcC
Q 016053 149 LKADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 149 ~~~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
++|+|++.+|.... +...+...+
T Consensus 66 -~~D~V~i~tp~~~h~~~~~~al~~g 90 (308)
T 3uuw_A 66 -KCDCIFLHSSTETHYEIIKILLNLG 90 (308)
T ss_dssp -TCSEEEECCCGGGHHHHHHHHHHTT
T ss_pred -cCCEEEEeCCcHhHHHHHHHHHHCC
Confidence 89999988865433 334445555
No 285
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.56 E-value=1.1e+02 Score=23.41 Aligned_cols=71 Identities=21% Similarity=0.179 Sum_probs=40.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhh-hcceEEEEcCc--hhhhhh--c
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISAKG--QETINT--A 148 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~--~ 148 (396)
.++|+++. +| ..-..+++.|.+.|++|+++..... ..+.+. ..+..++.... ...+.. .
T Consensus 19 ~~~v~IiG-----~G--~iG~~la~~L~~~g~~V~vid~~~~---------~~~~~~~~~g~~~~~~d~~~~~~l~~~~~ 82 (155)
T 2g1u_A 19 SKYIVIFG-----CG--RLGSLIANLASSSGHSVVVVDKNEY---------AFHRLNSEFSGFTVVGDAAEFETLKECGM 82 (155)
T ss_dssp CCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESCGG---------GGGGSCTTCCSEEEESCTTSHHHHHTTTG
T ss_pred CCcEEEEC-----CC--HHHHHHHHHHHhCCCeEEEEECCHH---------HHHHHHhcCCCcEEEecCCCHHHHHHcCc
Confidence 45788775 23 5566778888999999998874322 111222 33444443221 122222 3
Q ss_pred cCCcEEEEcCch
Q 016053 149 LKADLIVLNTAV 160 (396)
Q Consensus 149 ~~~DiV~~~~~~ 160 (396)
.++|+|+...+.
T Consensus 83 ~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 83 EKADMVFAFTND 94 (155)
T ss_dssp GGCSEEEECSSC
T ss_pred ccCCEEEEEeCC
Confidence 568999887753
No 286
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=43.54 E-value=28 Score=29.94 Aligned_cols=34 Identities=18% Similarity=0.015 Sum_probs=24.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.|+.+|+ ||..-.=..+++.|.++|++|.+....
T Consensus 27 ~k~~lVT-----Gas~GIG~aia~~la~~G~~Vv~~~~~ 60 (267)
T 3u5t_A 27 NKVAIVT-----GASRGIGAAIAARLASDGFTVVINYAG 60 (267)
T ss_dssp CCEEEEE-----SCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEe-----CCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4677777 344446667888899999999887644
No 287
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=43.42 E-value=39 Score=27.50 Aligned_cols=76 Identities=11% Similarity=0.110 Sum_probs=40.8
Q ss_pred cccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh----h
Q 016053 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN----T 147 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 147 (396)
+||||+++.. .|.+ .-+..-...|++.|++|++++...... .......|+.+........+. .
T Consensus 3 ~M~kV~ill~----dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~--------~~v~~~~g~~v~~d~~~~~~~~~d~~ 70 (194)
T 4gdh_A 3 HMVKVCLFVA----DGTDEIEFSAPWGIFKRAEIPIDSVYVGENKD--------RLVKMSRDVEMYANRSYKEIPSADDF 70 (194)
T ss_dssp --CCEEEEEE----TTCCHHHHHHHHHHHHHTTCCEEEEEESSCTT--------CEEECTTSCEEECSEEGGGSCCHHHH
T ss_pred CCCEEEEEEC----CCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCC--------ceEecCCCceeeccccHhhCCccccc
Confidence 3457888774 2443 445555677888999999888432210 001122355554333222221 1
Q ss_pred ccCCcEEEEcCch
Q 016053 148 ALKADLIVLNTAV 160 (396)
Q Consensus 148 ~~~~DiV~~~~~~ 160 (396)
..+||+|++....
T Consensus 71 ~~~yD~lvvPGG~ 83 (194)
T 4gdh_A 71 AKQYDIAIIPGGG 83 (194)
T ss_dssp HHHCSEEEECCCH
T ss_pred cccCCEEEECCCc
Confidence 2468999987643
No 288
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=43.38 E-value=44 Score=27.58 Aligned_cols=31 Identities=32% Similarity=0.209 Sum_probs=22.1
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+|+|+++. .| ..-..++..|.+.|++|.++.
T Consensus 28 ~~~I~iiG-----~G--~~G~~la~~l~~~g~~V~~~~ 58 (215)
T 2vns_A 28 APKVGILG-----SG--DFARSLATRLVGSGFKVVVGS 58 (215)
T ss_dssp -CCEEEEC-----CS--HHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEc-----cC--HHHHHHHHHHHHCCCEEEEEe
Confidence 35788885 23 455567888888999998875
No 289
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=43.34 E-value=23 Score=31.40 Aligned_cols=39 Identities=15% Similarity=0.007 Sum_probs=26.7
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
+...++.|+||+.. |....=..+++.|.++|++|.++..
T Consensus 14 ~~~~~~~~~vlVTG------asG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 14 LVPRGSHMRILITG------GAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCSTTTCCEEEEET------TTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CcccCCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 33455556776543 3335566788889999999999874
No 290
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=43.31 E-value=29 Score=28.99 Aligned_cols=39 Identities=23% Similarity=0.211 Sum_probs=29.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~ 113 (396)
++|+.+.+.-...|-.....+|+..|.+. |++|.++-.+
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 45555554444455568999999999998 9999999743
No 291
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.01 E-value=96 Score=26.48 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=23.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 11 k~vlVT-----Gas~gIG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVT-----GGARGQGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEe-----CCCChHHHHHHHHHHHCCCeEEEEcc
Confidence 455566 34444667889999999999988863
No 292
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=42.84 E-value=1.8e+02 Score=26.51 Aligned_cols=107 Identities=11% Similarity=0.007 Sum_probs=64.7
Q ss_pred EEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc---------cchHHHHHHHHHHhcCCCCcEEE
Q 016053 273 FAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA---------QTKFESELRNYVMQKKIQDRVHF 343 (396)
Q Consensus 273 il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~---------~~~~~~~l~~~~~~~~l~~~V~~ 343 (396)
++++|-..-. ..+.+++.+..+.+ -...++..|.-.++ ..+....+.+..++.|++ +.-
T Consensus 144 ~~Iigpcsve-s~e~a~~~a~~~k~---------aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~--~~t 211 (385)
T 3nvt_A 144 VFVFGPCSVE-SYEQVAAVAESIKA---------KGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLG--VIS 211 (385)
T ss_dssp EEEEECSBCC-CHHHHHHHHHHHHH---------TTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCE--EEE
T ss_pred EEEEEeCCcC-CHHHHHHHHHHHHH---------cCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 4456655444 77777777777654 34556655542110 123456777888888876 222
Q ss_pred ecC-cCCHHHHHHHcCEEEecCCCCCCCccHHHH-HHHhcCCCEEEcCCCCCC
Q 016053 344 VNK-TLTVAPYLAAIDVLVQNSQAWGECFGRITI-EAMAFQLPVLVLSELHPS 394 (396)
Q Consensus 344 ~g~-~~~~~~~~~~aDv~v~pS~~~~E~fg~~~l-EAma~G~PVI~t~~gG~~ 394 (396)
-.+ .+.+..+...+|++=.||.. -..+ .++ ++...|+||+.++...++
T Consensus 212 e~~d~~~~~~l~~~vd~lkIgs~~-~~n~--~LL~~~a~~gkPVilk~G~~~t 261 (385)
T 3nvt_A 212 EIVTPADIEVALDYVDVIQIGARN-MQNF--ELLKAAGRVDKPILLKRGLSAT 261 (385)
T ss_dssp ECCSGGGHHHHTTTCSEEEECGGG-TTCH--HHHHHHHTSSSCEEEECCTTCC
T ss_pred ecCCHHHHHHHHhhCCEEEECccc-ccCH--HHHHHHHccCCcEEEecCCCCC
Confidence 222 24455555558999999983 3343 444 456789999999876443
No 293
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=42.82 E-value=14 Score=33.18 Aligned_cols=42 Identities=17% Similarity=0.022 Sum_probs=27.3
Q ss_pred ccccEEEEEeccCCC-CChH-HHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSL-SGGP-LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|++|||+++....+. -... .....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 456789998842111 0000 24677899999999999988743
No 294
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=42.78 E-value=31 Score=29.68 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=23.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.+...
T Consensus 29 k~vlVT-----Gas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 29 RIALVT-----GASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 566676 44445667788999999999988764
No 295
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=42.69 E-value=82 Score=27.88 Aligned_cols=68 Identities=12% Similarity=0.077 Sum_probs=47.8
Q ss_pred CEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 308 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 308 ~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
+++++-+.+. ..+..++.+++++.+. + ..++.+++. ..|+++..+. ...-.-.+.+|+..|++|
T Consensus 28 ~~~l~av~d~------~~~~a~~~a~~~~~~~-~-----~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~~GkhV 93 (334)
T 3ohs_X 28 EHQVVAVAAR------DLSRAKEFAQKHDIPK-A-----YGSYEELAKDPNVEVAYVGTQ--HPQHKAAVMLCLAAGKAV 93 (334)
T ss_dssp TEEEEEEECS------SHHHHHHHHHHHTCSC-E-----ESSHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcC------CHHHHHHHHHHcCCCc-c-----cCCHHHHhcCCCCCEEEECCC--cHHHHHHHHHHHhcCCEE
Confidence 4677666553 3456677788777642 1 367888888 5899888776 444455578999999999
Q ss_pred EEcC
Q 016053 386 LVLS 389 (396)
Q Consensus 386 I~t~ 389 (396)
++=.
T Consensus 94 l~EK 97 (334)
T 3ohs_X 94 LCEK 97 (334)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9754
No 296
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=42.38 E-value=90 Score=28.04 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=46.3
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
|+++||.+|.. |. .-...+..|.+. |+++..++...+. -.+.....++.. ......+....+
T Consensus 3 m~~~~vgiiG~----G~---~g~~~~~~l~~~~~~~l~av~d~~~~--------~~~~a~~~g~~~--~~~~~~ll~~~~ 65 (359)
T 3e18_A 3 LKKYQLVIVGY----GG---MGSYHVTLASAADNLEVHGVFDILAE--------KREAAAQKGLKI--YESYEAVLADEK 65 (359)
T ss_dssp CCCEEEEEECC----SH---HHHHHHHHHHTSTTEEEEEEECSSHH--------HHHHHHTTTCCB--CSCHHHHHHCTT
T ss_pred CCcCcEEEECc----CH---HHHHHHHHHHhCCCcEEEEEEcCCHH--------HHHHHHhcCCce--eCCHHHHhcCCC
Confidence 55678999873 32 222445566664 7888777654321 011122334432 234455555678
Q ss_pred CcEEEEcCchhhH--HHHHHHhcC
Q 016053 151 ADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 151 ~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
+|+|++.+|.... +...+...+
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aG 89 (359)
T 3e18_A 66 VDAVLIATPNDSHKELAISALEAG 89 (359)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTT
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCC
Confidence 9999998865432 344455555
No 297
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.12 E-value=50 Score=26.20 Aligned_cols=71 Identities=20% Similarity=0.174 Sum_probs=41.0
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcC--chhhhhh--
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--GQETINT-- 147 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 147 (396)
..++|+++. .| ..-..+++.|.+. |++|+++..+.. ..+.+...|..++... ....+..
T Consensus 38 ~~~~v~IiG-----~G--~~G~~~a~~L~~~~g~~V~vid~~~~---------~~~~~~~~g~~~~~gd~~~~~~l~~~~ 101 (183)
T 3c85_A 38 GHAQVLILG-----MG--RIGTGAYDELRARYGKISLGIEIREE---------AAQQHRSEGRNVISGDATDPDFWERIL 101 (183)
T ss_dssp TTCSEEEEC-----CS--HHHHHHHHHHHHHHCSCEEEEESCHH---------HHHHHHHTTCCEEECCTTCHHHHHTBC
T ss_pred CCCcEEEEC-----CC--HHHHHHHHHHHhccCCeEEEEECCHH---------HHHHHHHCCCCEEEcCCCCHHHHHhcc
Confidence 345788774 22 5667778888888 999999864321 1122333455544322 2222222
Q ss_pred -ccCCcEEEEcCc
Q 016053 148 -ALKADLIVLNTA 159 (396)
Q Consensus 148 -~~~~DiV~~~~~ 159 (396)
..++|+|++..+
T Consensus 102 ~~~~ad~vi~~~~ 114 (183)
T 3c85_A 102 DTGHVKLVLLAMP 114 (183)
T ss_dssp SCCCCCEEEECCS
T ss_pred CCCCCCEEEEeCC
Confidence 357899988664
No 298
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=42.10 E-value=39 Score=28.74 Aligned_cols=41 Identities=7% Similarity=-0.015 Sum_probs=28.5
Q ss_pred ccEEEEEecc-CCCCChH-HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 74 SKLVLLVSHE-LSLSGGP-LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 74 ~~kIl~v~~~-~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
++||+++... ..+.|.+ .-+..-...|++.|++|++++..+
T Consensus 23 ~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 23 ALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp -CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4689888753 2234554 555566788899999999999654
No 299
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=41.91 E-value=34 Score=27.90 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=25.8
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||||+|......++.. .....+++.+ +.|++|.++-.
T Consensus 1 MkiLiI~gspr~~s~t~~l~~~~~~~~-~~g~~v~~~dL 38 (196)
T 3lcm_A 1 MKILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDL 38 (196)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHS-CTTSEEEEEET
T ss_pred CEEEEEEeCCCCCChHHHHHHHHHHHh-cCCCeEEEEEc
Confidence 4899888665555543 5555566666 78999999873
No 300
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=41.85 E-value=33 Score=32.43 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCcCCHH----HHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 324 FESELRNYVMQKKIQDRVHFVNKTLTVA----PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 324 ~~~~l~~~~~~~~l~~~V~~~g~~~~~~----~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
..+..+.+++++. +-+.+.|.-.+.. +-+..+|+++..... .|.-=++.+-|-.+|++=+.+.+
T Consensus 266 d~~r~~~la~~l~--~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~-De~Ni~~~llAk~~gv~kvIa~v 333 (461)
T 4g65_A 266 NLQRAEKLSEELE--NTIVFCGDAADQELLTEENIDQVDVFIALTNE-DETNIMSAMLAKRMGAKKVMVLI 333 (461)
T ss_dssp CHHHHHHHHHHCT--TSEEEESCTTCHHHHHHTTGGGCSEEEECCSC-HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHCC--CceEEeccccchhhHhhcCchhhcEEEEcccC-cHHHHHHHHHHHHcCCccccccc
Confidence 3456666666653 4566778754432 235778888876552 44444556777778877666544
No 301
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=41.57 E-value=72 Score=26.55 Aligned_cols=74 Identities=8% Similarity=0.066 Sum_probs=44.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch----------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------- 142 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 142 (396)
++||+++.+ |...-+..+.++.++ .+++|..+....+... -.+.....|++++.....
T Consensus 5 ~~riavl~S-----G~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~------~~~~A~~~gIp~~~~~~~~~~~r~~~d~ 73 (215)
T 3tqr_A 5 PLPIVVLIS-----GNGTNLQAIIGAIQKGLAIEIRAVISNRADAY------GLKRAQQADIPTHIIPHEEFPSRTDFES 73 (215)
T ss_dssp CEEEEEEES-----SCCHHHHHHHHHHHTTCSEEEEEEEESCTTCH------HHHHHHHTTCCEEECCGGGSSSHHHHHH
T ss_pred CcEEEEEEe-----CCcHHHHHHHHHHHcCCCCEEEEEEeCCcchH------HHHHHHHcCCCEEEeCccccCchhHhHH
Confidence 357877762 434677778887766 3678876665433210 123455678888764321
Q ss_pred --hhhhhccCCcEEEEcC
Q 016053 143 --ETINTALKADLIVLNT 158 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 74 ~~~~~l~~~~~Dliv~ag 91 (215)
T 3tqr_A 74 TLQKTIDHYDPKLIVLAG 91 (215)
T ss_dssp HHHHHHHTTCCSEEEESS
T ss_pred HHHHHHHhcCCCEEEEcc
Confidence 1223458999999876
No 302
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=41.56 E-value=27 Score=32.21 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=27.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
||++++|+++. || ..-..+++++++.|++|.++.
T Consensus 21 mm~~~~I~ilG-----gG--~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLG-----GG--QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEEC-----CS--HHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEEC-----CC--HHHHHHHHHHHHCCCEEEEEE
Confidence 45667899887 44 477788999999999999987
No 303
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=41.41 E-value=30 Score=24.85 Aligned_cols=78 Identities=17% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEe
Q 016053 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 362 (396)
Q Consensus 283 Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~ 362 (396)
.|....+++++. ...+++|+-...+. .....+..++++.+++ +.+.+..+++-.........++
T Consensus 21 ~G~~~v~kai~~------------gka~lViiA~D~~~--~~~~~i~~~c~~~~ip--~~~~~s~~eLG~a~Gk~~~~~v 84 (101)
T 3on1_A 21 TGEEQVVKAVQN------------GQVTLVILSSDAGI--HTKKKLLDKCGSYQIP--VKVVGNRQMLGRAIGKHERVVI 84 (101)
T ss_dssp ESHHHHHHHHHT------------TCCSEEEEETTSCH--HHHHHHHHHHHHHTCC--EEEESCHHHHHHHTTSSCCSEE
T ss_pred ECHHHHHHHHHc------------CCCcEEEEeCCCCH--HHHHHHHHHHHHcCCC--EEEeCCHHHHHHHhCCcCeEEE
Confidence 355777777754 46777777765433 3566788888888876 6677766777777766433333
Q ss_pred cCCCCCCCccHHHHHH
Q 016053 363 NSQAWGECFGRITIEA 378 (396)
Q Consensus 363 pS~~~~E~fg~~~lEA 378 (396)
.-. .+||.-.+.+-
T Consensus 85 ai~--d~g~a~~i~~~ 98 (101)
T 3on1_A 85 GVK--DAGFSRKLAAL 98 (101)
T ss_dssp EEC--CHHHHHHHHHH
T ss_pred EEE--CccHHHHHHHH
Confidence 334 66776665553
No 304
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=41.38 E-value=36 Score=29.44 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=30.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++++.+++.....|-.....+|+..|++.|.+|.++-.+
T Consensus 82 ~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 82 VQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 467777755555566689999999999999999998743
No 305
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=41.36 E-value=26 Score=31.73 Aligned_cols=33 Identities=21% Similarity=0.110 Sum_probs=23.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+||+ + ||....=..+++.|.+.|++|.++...
T Consensus 29 k~vlV-t-----GatG~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALI-T-----GITGQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEE-E-----TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEE-E-----cCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 46654 4 333356677888899999999998743
No 306
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=41.19 E-value=1.2e+02 Score=26.15 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=23.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 48 k~vlVT-----Gas~GIG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 48 KNVLIT-----GGDSGIGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-----CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455566 344446678899999999999887643
No 307
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=41.02 E-value=90 Score=27.61 Aligned_cols=68 Identities=3% Similarity=-0.050 Sum_probs=43.2
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+-. .+..++.+++++... ...+..++++ ..|+++..+. ...-.-.+.+|+..|++
T Consensus 27 ~~~~lvav~d~~------~~~~~~~a~~~~~~~------~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGkh 92 (336)
T 2p2s_A 27 AGAELAGVFESD------SDNRAKFTSLFPSVP------FAASAEQLITDASIDLIACAVI--PCDRAELALRTLDAGKD 92 (336)
T ss_dssp TTCEEEEEECSC------TTSCHHHHHHSTTCC------BCSCHHHHHTCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEeCCC------HHHHHHHHHhcCCCc------ccCCHHHHhhCCCCCEEEEeCC--hhhHHHHHHHHHHCCCc
Confidence 577876555432 233345555553211 1367888887 5898887776 44445556789999999
Q ss_pred EEEc
Q 016053 385 VLVL 388 (396)
Q Consensus 385 VI~t 388 (396)
|++=
T Consensus 93 Vl~E 96 (336)
T 2p2s_A 93 FFTA 96 (336)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9874
No 308
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.01 E-value=39 Score=25.12 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=23.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+|+++. .| ..-..+++.|.+.|++|+++..
T Consensus 5 m~i~IiG-----~G--~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAG-----IG--RVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp CEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC-----CC--HHHHHHHHHHHhCCCeEEEEEC
Confidence 5788774 22 4556778889999999998864
No 309
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=41.00 E-value=32 Score=26.35 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=26.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi 110 (396)
|+|+++.. ...|..+.....+++.|.+.|++|.++
T Consensus 2 ~ki~I~Y~-S~tGnT~~~A~~ia~~l~~~g~~v~~~ 36 (147)
T 2hna_A 2 ADITLISG-STLGGAEYVAEHLAEKLEEAGFTTETL 36 (147)
T ss_dssp CSEEEECC-TTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEE-CCchHHHHHHHHHHHHHHHCCCceEEe
Confidence 35666542 233667799999999999999998876
No 310
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=40.93 E-value=38 Score=28.10 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=25.9
Q ss_pred ccccEEEEEeccCCCCCh-HHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++++||++... ||. .....++++.|++.| +|.++...
T Consensus 17 l~~k~IllgvT----Gsiaa~k~~~ll~~L~~~g-~V~vv~T~ 54 (209)
T 1mvl_A 17 PRKPRVLLAAS----GSVAAIKFGNLCHCFTEWA-EVRAVVTK 54 (209)
T ss_dssp --CCEEEEEEC----SSGGGGGHHHHHHHHHTTS-EEEEEECT
T ss_pred cCCCEEEEEEe----CcHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 45567777663 222 355889999999999 99999854
No 311
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=40.82 E-value=28 Score=29.35 Aligned_cols=35 Identities=20% Similarity=0.025 Sum_probs=24.7
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
.|+.+|+ ||..-.=..+++.|.++|++|.++....
T Consensus 7 ~k~vlIT-----Gas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 7 GKVALVT-----GASRGIGRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp TCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEE-----CCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 3556666 3444466788899999999999876443
No 312
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=40.77 E-value=69 Score=28.81 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=47.1
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+. ..+..++.++++++... . .+++.+++.. .|+++..+. ...-.-.+.+|+..|++
T Consensus 47 ~~~~lvav~d~------~~~~~~~~a~~~g~~~~--~---~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~ 113 (357)
T 3ec7_A 47 SGVEVVAVCDI------VAGRAQAALDKYAIEAK--D---YNDYHDLINDKDVEVVIITAS--NEAHADVAVAALNANKY 113 (357)
T ss_dssp TTEEEEEEECS------STTHHHHHHHHHTCCCE--E---ESSHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEEeC------CHHHHHHHHHHhCCCCe--e---eCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCC
Confidence 68888755543 23455666777664211 1 2678888884 899888776 55555567899999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++=.
T Consensus 114 Vl~EK 118 (357)
T 3ec7_A 114 VFCEK 118 (357)
T ss_dssp EEEES
T ss_pred EEeec
Confidence 99744
No 313
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=40.75 E-value=1.5e+02 Score=27.42 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=60.0
Q ss_pred CCEEEEEEec----ccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEe
Q 016053 269 EDLLFAIINS----VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 344 (396)
Q Consensus 269 ~~~~il~vG~----l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~ 344 (396)
+.+.|+++|- -.-.+. .++++... .++++++-+-+- ..+..++.+++++.++ +..
T Consensus 19 ~~irvgiIG~g~~gG~~g~~---~~~~l~~~----------~~~~~lvav~d~------~~~~~~~~a~~~g~~~-~~~- 77 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKT---HYPAILQL----------SSQFQITALYSP------KIETSIATIQRLKLSN-ATA- 77 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTT---HHHHHHHT----------TTTEEEEEEECS------SHHHHHHHHHHTTCTT-CEE-
T ss_pred CCCEEEEEcccCCCChHHHH---HHHHHHhc----------CCCeEEEEEEeC------CHHHHHHHHHHcCCCc-cee-
Confidence 4577888886 222333 34444431 057887766543 3455667777777642 222
Q ss_pred cCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcC------CCEEEcC
Q 016053 345 NKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQ------LPVLVLS 389 (396)
Q Consensus 345 g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G------~PVI~t~ 389 (396)
..++.++++ ..|+++..+. ...-.-.+.+|+..| ++|++=.
T Consensus 78 --~~~~~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~aG~~~~~~khVl~EK 126 (438)
T 3btv_A 78 --FPTLESFASSSTIDMIVIAIQ--VASHYEVVMPLLEFSKNNPNLKYLFVEW 126 (438)
T ss_dssp --ESSHHHHHHCSSCSEEEECSC--HHHHHHHHHHHHHHGGGCTTCCEEEEES
T ss_pred --eCCHHHHhcCCCCCEEEEeCC--cHHHHHHHHHHHHCCCCcccceeEEecC
Confidence 257788887 5899888776 444445567899999 9998753
No 314
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=40.73 E-value=46 Score=26.64 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=27.3
Q ss_pred cEEEEEeccCCCCCh-HHHHHHHHHHHHhC------CCEEEEEe
Q 016053 75 KLVLLVSHELSLSGG-PLLLMELAFLLRGV------GTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~------G~~V~vi~ 111 (396)
|||++|......+|. ......+++.+.+. |++|.++-
T Consensus 1 Mkilii~gS~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~d 44 (191)
T 1t0i_A 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVD 44 (191)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEEC
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEe
Confidence 478888866554443 46777778888876 79999887
No 315
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=40.71 E-value=32 Score=26.17 Aligned_cols=36 Identities=17% Similarity=0.050 Sum_probs=26.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|||+++.... .|-.+.....+++.|.+.|++|.++.
T Consensus 1 mki~iiy~S~-~Gnt~~~a~~i~~~l~~~g~~v~~~~ 36 (147)
T 1f4p_A 1 PKALIVYGST-TGNTEYTAETIARELADAGYEVDSRD 36 (147)
T ss_dssp CEEEEEEECS-SSHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEEECC-cCHHHHHHHHHHHHHHhcCCeeEEEe
Confidence 3677765322 24455888888999998999998875
No 316
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=40.69 E-value=32 Score=31.40 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=53.0
Q ss_pred CCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCc
Q 016053 268 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 347 (396)
Q Consensus 268 ~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~ 347 (396)
..++.++.+|.- . | ..-++++.++. ++++|+=+-+. ..+..++.++++|++ ..
T Consensus 5 ~~~~rv~VvG~G-~--g-~~h~~a~~~~~----------~~~elvav~~~------~~~~a~~~a~~~gv~----~~--- 57 (372)
T 4gmf_A 5 SPKQRVLIVGAK-F--G-EMYLNAFMQPP----------EGLELVGLLAQ------GSARSRELAHAFGIP----LY--- 57 (372)
T ss_dssp --CEEEEEECST-T--T-HHHHHTTSSCC----------TTEEEEEEECC------SSHHHHHHHHHTTCC----EE---
T ss_pred CCCCEEEEEehH-H--H-HHHHHHHHhCC----------CCeEEEEEECC------CHHHHHHHHHHhCCC----EE---
Confidence 456788889862 1 3 23455554321 25777744332 236677888888864 22
Q ss_pred CCHHHHHHHcCEEEecCCCCCCCc----cHHHHHHHhcCCCEEEc
Q 016053 348 LTVAPYLAAIDVLVQNSQAWGECF----GRITIEAMAFQLPVLVL 388 (396)
Q Consensus 348 ~~~~~~~~~aDv~v~pS~~~~E~f----g~~~lEAma~G~PVI~t 388 (396)
.++.+++...|+.+.... ...- --...+|+..|++|++=
T Consensus 58 ~~~~~l~~~~D~v~i~~p--~~~h~~~~~~~a~~al~aGkhVl~E 100 (372)
T 4gmf_A 58 TSPEQITGMPDIACIVVR--STVAGGAGTQLARHFLARGVHVIQE 100 (372)
T ss_dssp SSGGGCCSCCSEEEECCC----CTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCEEEEECC--CcccchhHHHHHHHHHHcCCcEEEe
Confidence 344455667888765443 2221 12467899999999873
No 317
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=40.65 E-value=28 Score=25.01 Aligned_cols=34 Identities=32% Similarity=0.322 Sum_probs=22.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++++|+++... +.....+...|.+.|++|..+.
T Consensus 3 mm~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 36 (127)
T 2gkg_A 3 HMSKKILIVESD------TALSATLRSALEGRGFTVDETT 36 (127)
T ss_dssp ---CEEEEECSC------HHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCeEEEEeCC------HHHHHHHHHHHHhcCceEEEec
Confidence 455689988742 3456667777888899987554
No 318
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=40.51 E-value=1.2e+02 Score=27.09 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=44.5
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+.. .+.. +.+++.+.. ..++..++++ ..|+++..+. ...-.-.+.+|+..|++
T Consensus 28 ~~~~l~av~d~~------~~~~-~~a~~~g~~-------~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGkh 91 (359)
T 3e18_A 28 DNLEVHGVFDIL------AEKR-EAAAQKGLK-------IYESYEAVLADEKVDAVLIATP--NDSHKELAISALEAGKH 91 (359)
T ss_dssp TTEEEEEEECSS------HHHH-HHHHTTTCC-------BCSCHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCcEEEEEEcCC------HHHH-HHHHhcCCc-------eeCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCC
Confidence 678877655432 2222 244555532 1368888998 7899888776 45445567899999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++-.
T Consensus 92 Vl~EK 96 (359)
T 3e18_A 92 VVCEK 96 (359)
T ss_dssp EEEES
T ss_pred EEeeC
Confidence 99754
No 319
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=40.50 E-value=62 Score=29.31 Aligned_cols=80 Identities=6% Similarity=0.037 Sum_probs=46.5
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. |..++...++.++...|.+|.++++..-...........+.....|..+........ .-.+.|
T Consensus 175 ~gl~va~vGD-----~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~e--av~~aD 247 (359)
T 2w37_A 175 QGLTLTFMGD-----GRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDE--GLKGSN 247 (359)
T ss_dssp TTCEEEEESC-----TTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHH--HHTTCS
T ss_pred CCeEEEEECC-----CccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHH--HhcCCC
Confidence 3468998874 224899999999999999999999765433222211122222234433322222221 125789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|+....
T Consensus 248 vvytd~w 254 (359)
T 2w37_A 248 VVYTDVW 254 (359)
T ss_dssp EEEECCS
T ss_pred EEEEccc
Confidence 9988643
No 320
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=40.49 E-value=36 Score=28.82 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=23.9
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 23 k~vlIT-----Gas~gIG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 23 KNILVL-----GGSGALGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455566 344456678899999999998888744
No 321
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=40.47 E-value=1e+02 Score=27.95 Aligned_cols=82 Identities=9% Similarity=0.067 Sum_probs=46.0
Q ss_pred cccE--EEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc-CCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 73 KSKL--VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ-KPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 73 ~~~k--Il~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
+.+| |+++.. ...+| .+....++.++...|.+|+++++. +-...........+.....|..+........ ...
T Consensus 189 ~glkvvva~vGD-l~~~~-nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~e--av~ 264 (359)
T 1zq6_A 189 RGKKYVLTWTYH-PKPLN-TAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDS--AYA 264 (359)
T ss_dssp TTCEEEEEECCC-SSCCC-SHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHH--HHT
T ss_pred cCCeeEEEEEec-ccccc-cchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHH--Hhc
Confidence 4567 666654 33334 799999999999999999999976 4332222211112222233444432222221 125
Q ss_pred CCcEEEEcC
Q 016053 150 KADLIVLNT 158 (396)
Q Consensus 150 ~~DiV~~~~ 158 (396)
+.|+|+...
T Consensus 265 ~aDvVyt~~ 273 (359)
T 1zq6_A 265 GADVVYAKS 273 (359)
T ss_dssp TCSEEEEEC
T ss_pred CCCEEEECC
Confidence 678888754
No 322
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=40.28 E-value=35 Score=24.73 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=24.1
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++++||++.. -+.....+...|.+.|++|..+.
T Consensus 1 M~~~~ilivdd------~~~~~~~l~~~L~~~g~~v~~~~ 34 (127)
T 3i42_A 1 MSLQQALIVED------YQAAAETFKELLEMLGFQADYVM 34 (127)
T ss_dssp -CCEEEEEECS------CHHHHHHHHHHHHHTTEEEEEES
T ss_pred CCcceEEEEcC------CHHHHHHHHHHHHHcCCCEEEEC
Confidence 55678998873 23566677788888999877654
No 323
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=40.25 E-value=50 Score=29.07 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=20.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|||+++.. ...| ..++..|.+.|++|+++..
T Consensus 3 mkI~IiGa-GaiG------~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 3 LRIAIVGA-GALG------LYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp -CEEEECC-STTH------HHHHHHHHHTSCCEEEECS
T ss_pred CEEEEECc-CHHH------HHHHHHHHHCCCeEEEEEc
Confidence 68988863 1222 2346777888999999874
No 324
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=40.22 E-value=22 Score=31.55 Aligned_cols=32 Identities=3% Similarity=-0.127 Sum_probs=25.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|+|+++.. | ....+++++++.|++|.++...
T Consensus 2 ~m~Ililg~-----g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS-----H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS-----T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC-----h---hHHHHHHHHHhCCCEEEEEECC
Confidence 468998883 3 5667899999999999998744
No 325
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=40.07 E-value=2.1e+02 Score=25.76 Aligned_cols=106 Identities=15% Similarity=0.084 Sum_probs=63.2
Q ss_pred EEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc---------cchHHHHHHHHHHhcCCCCcEEEec
Q 016053 275 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA---------QTKFESELRNYVMQKKIQDRVHFVN 345 (396)
Q Consensus 275 ~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~---------~~~~~~~l~~~~~~~~l~~~V~~~g 345 (396)
.++.....-..+.+++.++.+++ -...++-.+.-.++ ..+....+++.+++.|++ +.--.
T Consensus 109 vIAgpcs~es~e~a~~~a~~~k~---------aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~--~~te~ 177 (350)
T 1vr6_A 109 IIAGPCSVEGREMLMETAHFLSE---------LGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMY--VVTEA 177 (350)
T ss_dssp EEEECSBCCCHHHHHHHHHHHHH---------TTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCE--EEEEC
T ss_pred EEEeCCCcCCHHHHHHHHHHHHH---------cCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCc--EEEEe
Confidence 34444557778888888887765 23344433322211 124567788888899876 22222
Q ss_pred C-cCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCCC
Q 016053 346 K-TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELHP 393 (396)
Q Consensus 346 ~-~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG~ 393 (396)
+ .+++..+-..+|++=.+|+. -+.+++ +-|+...|+||+.++.-.+
T Consensus 178 ~d~~~~~~l~~~vd~lkIgAr~-~~n~~L-L~~va~~~kPVilk~G~~~ 224 (350)
T 1vr6_A 178 LGEDDLPKVAEYADIIQIGARN-AQNFRL-LSKAGSYNKPVLLKRGFMN 224 (350)
T ss_dssp SSGGGHHHHHHHCSEEEECGGG-TTCHHH-HHHHHTTCSCEEEECCTTC
T ss_pred CCHHHHHHHHHhCCEEEECccc-ccCHHH-HHHHHccCCcEEEcCCCCC
Confidence 2 24455554558999999983 334332 3344558999999886653
No 326
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=40.00 E-value=41 Score=27.26 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=41.2
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCC-CCchhhhhhhhhhhhhcceEEEEcCchhhhhh--cc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKP-SEEDEVIYSLEHKMWDRGVQVISAKGQETINT--AL 149 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 149 (396)
+++||||+....- -......+.+.+.. .|.++.+.+.... ..-.+........+...|+++- ...+.+.. ..
T Consensus 34 ~~~VLFVC~gNiC--RSpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis--hrar~lt~~d~~ 109 (184)
T 4etn_A 34 SMDIIFVCTGNTS--RSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN--HVSSPLTEELME 109 (184)
T ss_dssp CEEEEEEESSSSS--HHHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC--CBCCBCCHHHHH
T ss_pred CCEEEEECCCchh--HHHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch--hccCcCCHHHcC
Confidence 4799999964332 22455555555444 4445666663221 1111122223334556676654 22233322 25
Q ss_pred CCcEEEEcCc
Q 016053 150 KADLIVLNTA 159 (396)
Q Consensus 150 ~~DiV~~~~~ 159 (396)
.+|+|++-+.
T Consensus 110 ~~DlIltMd~ 119 (184)
T 4etn_A 110 SADLVLAMTH 119 (184)
T ss_dssp HCSEEEESSH
T ss_pred CCCEEEEcCc
Confidence 6899998764
No 327
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=39.92 E-value=30 Score=29.81 Aligned_cols=33 Identities=21% Similarity=0.111 Sum_probs=24.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 28 ~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 28 KQVAIVT-----GASRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TCEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3566676 44445667788999999999988763
No 328
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=39.44 E-value=84 Score=28.08 Aligned_cols=81 Identities=11% Similarity=-0.003 Sum_probs=46.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCC--Cchhhhhhhhhhhhh--cceEEEEcCchhhhhh
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWD--RGVQVISAKGQETINT 147 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 147 (396)
.+..+|+++... ..+....++.++...|.+|+++++.+-. ..........+.... .|..+........ .
T Consensus 159 l~gl~va~vGD~-----~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~e--a 231 (328)
T 3grf_A 159 FKGIKFAYCGDS-----MNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKK--G 231 (328)
T ss_dssp GGGCCEEEESCC-----SSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHH--H
T ss_pred cCCcEEEEeCCC-----CcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHH--H
Confidence 344689998752 1268999999999999999999976532 222221112222222 3544433222221 1
Q ss_pred ccCCcEEEEcCc
Q 016053 148 ALKADLIVLNTA 159 (396)
Q Consensus 148 ~~~~DiV~~~~~ 159 (396)
-.+.|+|+....
T Consensus 232 v~~aDvvytd~W 243 (328)
T 3grf_A 232 CEGVDVVYTDSW 243 (328)
T ss_dssp HTTCSEEEECCC
T ss_pred hcCCCEEEecCc
Confidence 257899988643
No 329
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.43 E-value=84 Score=22.84 Aligned_cols=37 Identities=14% Similarity=-0.068 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
++|||++++... ......+..+-++..++|.++.+..
T Consensus 5 ~~mkIlL~C~aG--mSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGS--GTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSS--SHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCC--CCHHHHHHHHHHHHHHCCCceEEEE
Confidence 456899998522 1223666777777778899999976
No 330
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=39.03 E-value=1.8e+02 Score=24.67 Aligned_cols=42 Identities=7% Similarity=-0.085 Sum_probs=28.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
+..+|.++.+.....-.......+.+++.+.|+++.++....
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~ 45 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGG 45 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 345898888755332223566666777788899999987553
No 331
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=39.01 E-value=52 Score=28.49 Aligned_cols=43 Identities=23% Similarity=0.363 Sum_probs=31.8
Q ss_pred cccccEEEEEecc-CCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 71 FMKSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 71 ~m~~~kIl~v~~~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.|+.||-.||+.. .+.=|-......+...|+.+|++|+++--+
T Consensus 19 ~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 19 YFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp --CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 4666788888765 333444588999999999999999998733
No 332
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=38.99 E-value=1.3e+02 Score=26.48 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=46.0
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+-+- ..+..++.+++++.+. ..+++.+++. .+|+++..+. ...-.-.+.+|+..|++
T Consensus 23 ~~~~~vav~d~------~~~~~~~~~~~~g~~~------~~~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~Gk~ 88 (332)
T 2glx_A 23 TGGEVVSMMST------SAERGAAYATENGIGK------SVTSVEELVGDPDVDAVYVSTT--NELHREQTLAAIRAGKH 88 (332)
T ss_dssp TTCEEEEEECS------CHHHHHHHHHHTTCSC------CBSCHHHHHTCTTCCEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCCeEEEEECC------CHHHHHHHHHHcCCCc------ccCCHHHHhcCCCCCEEEEeCC--hhHhHHHHHHHHHCCCe
Confidence 46676644443 2345566677766531 1367888887 4899988777 55555667789999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++-.
T Consensus 89 v~~ek 93 (332)
T 2glx_A 89 VLCEK 93 (332)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99743
No 333
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=38.93 E-value=44 Score=24.61 Aligned_cols=36 Identities=22% Similarity=0.053 Sum_probs=24.4
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
...++++|+++... ......+...|.+.|++|..+.
T Consensus 14 ~~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 49 (137)
T 2pln_A 14 VPRGSMRVLLIEKN------SVLGGEIEKGLNVKGFMADVTE 49 (137)
T ss_dssp -CTTCSEEEEECSC------HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCCCeEEEEeCC------HHHHHHHHHHHHHcCcEEEEeC
Confidence 34455689988732 3556667777888899887543
No 334
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=38.30 E-value=35 Score=31.22 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=23.9
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
..++.++|++|. || ..=..+|..|++.|++|+|+=.
T Consensus 19 ~~~~~~dV~IVG-----aG--~aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 19 YFQGHMKAIVIG-----AG--IGGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ----CCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEEC-----CC--HHHHHHHHHHHhCCCCEEEEeC
Confidence 344556899887 44 3345567788889999999963
No 335
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=38.26 E-value=2.3e+02 Score=25.63 Aligned_cols=89 Identities=11% Similarity=0.115 Sum_probs=54.7
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHhc
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQK 335 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~~ 335 (396)
---+++.+|- -+...|.|+|-. ...=..-++.+++.+ ++++.++|+..- .+.+..+.+++.+++.
T Consensus 164 l~Ti~E~~g~-l~gl~va~vGD~-~~rva~Sl~~~~~~l------------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~ 229 (359)
T 2w37_A 164 FMTVKENFGK-LQGLTLTFMGDG-RNNVANSLLVTGAIL------------GVNIHIVAPKALFPTEETQNIAKGFAEKS 229 (359)
T ss_dssp HHHHHHHHSC-CTTCEEEEESCT-TSHHHHHHHHHHHHH------------TCEEEEECCGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-cCCeEEEEECCC-ccchHHHHHHHHHHc------------CCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 3456777773 356789999985 222233444444432 689999997431 1122334455666666
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS 364 (396)
|. .+.+. +++.+.+..|||+....
T Consensus 230 G~--~v~~~---~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 230 GA--KLVIT---DDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp TC--CEEEE---SCHHHHHTTCSEEEECC
T ss_pred CC--eEEEE---eCHHHHhcCCCEEEEcc
Confidence 63 35443 67889999999988754
No 336
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=38.12 E-value=39 Score=27.71 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHH-hCCCEEEEEeccCC-CCchhhhhhhhhhh-hhcceEEEEcCch--hhhh-hccCCcEEEEcCch
Q 016053 90 PLLLMELAFLLR-GVGTKVNWITIQKP-SEEDEVIYSLEHKM-WDRGVQVISAKGQ--ETIN-TALKADLIVLNTAV 160 (396)
Q Consensus 90 ~~~~~~l~~~L~-~~G~~V~vi~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~-~~~~~DiV~~~~~~ 160 (396)
...=..+++.|. +.|++|.++..... . +.... ...++.++..... ..+. ...++|+|+.+...
T Consensus 15 g~iG~~~~~~l~~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 15 GQIAQXLTATLLTYTDMHITLYGRQLKTR--------IPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SHHHHHHHHHHHHHCCCEEEEEESSHHHH--------SCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred cHHHHHHHHHHHhcCCceEEEEecCcccc--------chhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 345567788888 79999998874311 1 11100 2234555443322 2222 12478999877643
No 337
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=37.77 E-value=1.2e+02 Score=25.21 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=52.3
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHH--HHhCCCEEEEEeccCCC-CchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~--L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
+..+++++.. | ..-..++++ +.+.|+++.-+.+..+. . ... ....|+++++......+.+..
T Consensus 83 ~~~~V~IvGa-----G--~lG~aLa~~~~~~~~g~~iVg~~D~dp~~k-------iG~-~~i~GvpV~~~~dL~~~v~~~ 147 (212)
T 3keo_A 83 STTNVMLVGC-----G--NIGRALLHYRFHDRNKMQISMAFDLDSNDL-------VGK-TTEDGIPVYGISTINDHLIDS 147 (212)
T ss_dssp SCEEEEEECC-----S--HHHHHHTTCCCCTTSSEEEEEEEECTTSTT-------TTC-BCTTCCBEEEGGGHHHHC-CC
T ss_pred CCCEEEEECc-----C--HHHHHHHHhhhcccCCeEEEEEEeCCchhc-------cCc-eeECCeEEeCHHHHHHHHHHc
Confidence 4457888762 3 233334554 34568888877765442 1 111 022478888876667777788
Q ss_pred CCcEEEEcCchhh--HHHHHHHhcCCC
Q 016053 150 KADLIVLNTAVAG--KWLDAVLKEDVP 174 (396)
Q Consensus 150 ~~DiV~~~~~~~~--~~~~~~~~~~~~ 174 (396)
++|+++...|... -....+...+++
T Consensus 148 ~Id~vIIAvPs~~aq~v~d~lv~~GIk 174 (212)
T 3keo_A 148 DIETAILTVPSTEAQEVADILVKAGIK 174 (212)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred CCCEEEEecCchhHHHHHHHHHHcCCC
Confidence 9999999886543 244555666755
No 338
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.30 E-value=49 Score=29.07 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=30.1
Q ss_pred ccEEEEEeccCCCCC-hHHHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 74 SKLVLLVSHELSLSG-GPLLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG-~~~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
+||+++|.+..+.+| +.....++...|.+.|+++.++....+
T Consensus 8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 457877776544433 446778888999999999998875544
No 339
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=37.29 E-value=45 Score=28.44 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 27 k~vlVT-----Gas~gIG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVT-----GASKGIGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CEEEET-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 455566 444456678899999999999887744
No 340
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=37.24 E-value=97 Score=27.81 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=46.0
Q ss_pred ccccEEEEEeccCCCCChHHHHH-HHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLM-ELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~-~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
|+++||.+|.. | ..-. .+++.|.+. |+++..++...+. ....+.+.+ .+...+ .....+....
T Consensus 3 M~~~rigiIG~-----G--~~g~~~~~~~l~~~~~~~l~av~d~~~~----~~~~~a~~~--~~~~~~--~~~~~ll~~~ 67 (359)
T 3m2t_A 3 LSLIKVGLVGI-----G--AQMQENLLPSLLQMQDIRIVAACDSDLE----RARRVHRFI--SDIPVL--DNVPAMLNQV 67 (359)
T ss_dssp CCCEEEEEECC-----S--HHHHHTHHHHHHTCTTEEEEEEECSSHH----HHGGGGGTS--CSCCEE--SSHHHHHHHS
T ss_pred CCcceEEEECC-----C--HHHHHHHHHHHHhCCCcEEEEEEcCCHH----HHHHHHHhc--CCCccc--CCHHHHhcCC
Confidence 55679999873 3 1222 355666664 7888877654321 111111111 122222 3445556667
Q ss_pred CCcEEEEcCchhhH--HHHHHHhcCC
Q 016053 150 KADLIVLNTAVAGK--WLDAVLKEDV 173 (396)
Q Consensus 150 ~~DiV~~~~~~~~~--~~~~~~~~~~ 173 (396)
++|+|++.+|.... +...+...+.
T Consensus 68 ~vD~V~i~tp~~~H~~~~~~al~aGk 93 (359)
T 3m2t_A 68 PLDAVVMAGPPQLHFEMGLLAMSKGV 93 (359)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCC
Confidence 89999998875432 3344555553
No 341
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=37.19 E-value=67 Score=25.03 Aligned_cols=38 Identities=8% Similarity=0.004 Sum_probs=29.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+++... ..|..+.....+++.|.+.|++|.++...
T Consensus 5 ~kv~IvY~S-~~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 5 TSIGVFYVS-EYGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CEEEEEECT-TSTTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEEEC-CChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 477777642 24777799999999999999999888643
No 342
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=37.08 E-value=1.3e+02 Score=24.63 Aligned_cols=36 Identities=22% Similarity=0.133 Sum_probs=24.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCC--EEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~ 113 (396)
|+.|+|++.. |....=..+++.|.++|+ +|.++...
T Consensus 16 m~~~~vlVtG------asg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILG------ASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEEC------TTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEEC------CCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 4445665443 333456677888888999 99988744
No 343
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=36.91 E-value=68 Score=26.67 Aligned_cols=26 Identities=15% Similarity=0.109 Sum_probs=19.5
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||..-.=..+++.|.++|++|.++..
T Consensus 12 GasggiG~~~a~~l~~~G~~V~~~~~ 37 (247)
T 2hq1_A 12 GSSRGLGKAIAWKLGNMGANIVLNGS 37 (247)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 33345667788899999999988853
No 344
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=36.86 E-value=1.2e+02 Score=25.88 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=23.8
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.+.|++|.++..
T Consensus 12 k~~lVT-----Gas~gIG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 12 KVAFVT-----GAARGQGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEe-----CCCchHHHHHHHHHHHCCCeEEEEec
Confidence 566676 34444667889999999999988864
No 345
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=36.76 E-value=47 Score=30.97 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=24.1
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
++|||++. ++ .....+++++++.|++|.++..
T Consensus 2 ~k~ilI~g------~g-~~~~~~~~a~~~~G~~vv~v~~ 33 (451)
T 1ulz_A 2 VNKVLVAN------RG-EIAVRIIRACKELGIPTVAIYN 33 (451)
T ss_dssp CSSEEECC------CH-HHHHHHHHHHHHHTCCEEEEEC
T ss_pred CceEEEEC------Cc-HHHHHHHHHHHHcCCeEEEEec
Confidence 35788765 22 3566799999999999998874
No 346
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.55 E-value=1e+02 Score=25.43 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=41.4
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch-----------
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ----------- 142 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 142 (396)
||+++.+ |....+..|++++++. +++|..+....+... ..+.....|++++.....
T Consensus 2 riaVl~S-----G~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~------~~~~A~~~gIp~~~~~~~~~~~r~~~~~~ 70 (209)
T 1meo_A 2 RVAVLIS-----GTGSNLQALIDSTREPNSSAQIDIVISNKAAVA------GLDKAERAGIPTRVINHKLYKNRVEFDSA 70 (209)
T ss_dssp EEEEEES-----SSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCH------HHHHHHHTTCCEEECCGGGSSSHHHHHHH
T ss_pred eEEEEEE-----CCchHHHHHHHHHhcCCCCcEEEEEEeCCCChH------HHHHHHHcCCCEEEECccccCchhhhhHH
Confidence 6666653 2234566677776664 688876664433211 123456678888744321
Q ss_pred -hhhhhccCCcEEEEcC
Q 016053 143 -ETINTALKADLIVLNT 158 (396)
Q Consensus 143 -~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 71 ~~~~l~~~~~Dliv~a~ 87 (209)
T 1meo_A 71 IDLVLEEFSIDIVCLAG 87 (209)
T ss_dssp HHHHHHHTTCCEEEEES
T ss_pred HHHHHHhcCCCEEEEcc
Confidence 1223457999998765
No 347
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=36.39 E-value=1.5e+02 Score=26.77 Aligned_cols=84 Identities=8% Similarity=0.039 Sum_probs=45.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCC-CchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
+.++|.++.....-....++...++.++...|.+|.++++.+.. ................|..+......... ..+.
T Consensus 189 ~g~kv~~~~~~~gd~~~~~Va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea--v~~a 266 (359)
T 3kzn_A 189 RGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSA--YAGA 266 (359)
T ss_dssp TTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHH--HTTC
T ss_pred cCCeEEEEEeecCCccccchhhhhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHH--hcCC
Confidence 44677766643222223589999999999999999999975321 11111111222233344444333222221 2467
Q ss_pred cEEEEcC
Q 016053 152 DLIVLNT 158 (396)
Q Consensus 152 DiV~~~~ 158 (396)
|+|+...
T Consensus 267 Dvvyt~r 273 (359)
T 3kzn_A 267 DVVYAKS 273 (359)
T ss_dssp SEEEEEC
T ss_pred eEEEEEE
Confidence 8887753
No 348
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=36.38 E-value=9.5 Score=34.46 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=61.7
Q ss_pred HHHHHcCCCCCCEEEEEEeccc--CCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcC
Q 016053 259 HVRESLGVRNEDLLFAIINSVS--RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 259 ~~r~~~g~~~~~~~il~vG~l~--~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
.+++ +|+ +-+.-++..|.+. ..|+.+.+.+|++.++++. |++ .+.|+-+ ....+.+.+.+.+
T Consensus 198 ~~~~-~Gi-~PrVAlLs~~~~G~e~~~~~~~i~~A~~llk~~~-------~~~--~v~Gpl~-----~D~a~~~~~~~~k 261 (337)
T 1r5j_A 198 TAKI-FDI-DPKIAMLSFSTKGSGKAPQVDKVREATEIATGLN-------PDL--ALDGELQ-----FDAAFVPETAAIK 261 (337)
T ss_dssp HHHH-TTC-CCCEEEECSCSTTSSCSHHHHHHHHHHHHHHHHC-------TTS--CEEEEEC-----HHHHHCHHHHHHH
T ss_pred HHHH-cCC-CCeEEEEecCccCCCCCCCcHHHHHHHHHHhccC-------CCc--EEEecCc-----HHHhcCHHHHHhh
Confidence 4555 898 6666666664443 4677777999999887521 443 5678764 3344444343322
Q ss_pred CCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCccHHHHHHHh---------cC--CCEEEcCCC
Q 016053 337 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA---------FQ--LPVLVLSEL 391 (396)
Q Consensus 337 l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma---------~G--~PVI~t~~g 391 (396)
.++ ..+-..+|++|+|..+ .-..++++++-+. .| +||+-|..+
T Consensus 262 ~~~-----------s~~~G~aDvlv~p~~d-~GnI~~K~l~~~~~~~~~g~i~lGl~~Pvi~tS~~ 315 (337)
T 1r5j_A 262 APD-----------SAVAGQANTFVFPDLQ-SGNIGYKIAQRLGMFDAIGPILQGLNKPVNDLSRG 315 (337)
T ss_dssp SCS-----------CSSTTCCCEEECSSHH-HHHHHHHHHHHTTCCEEEEEEEESBSSCEEECCTT
T ss_pred CCC-----------CccCCCCCEEEECChH-HHHHHHHHHHHhcCCccccccccCCCCcEEECCCC
Confidence 211 1234578999999883 3345566666554 23 577766554
No 349
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=36.37 E-value=37 Score=29.30 Aligned_cols=36 Identities=17% Similarity=0.046 Sum_probs=23.2
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|.+.|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 21 m~~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 21 MSRPQTAFVT-----GVSSGIGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp ----CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEe-----CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4444566677 34444667788899999999887763
No 350
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=36.33 E-value=1.7e+02 Score=23.77 Aligned_cols=74 Identities=7% Similarity=0.168 Sum_probs=45.6
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc-----hHHHHHHHHHHhcCC-CCcEEE
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT-----KFESELRNYVMQKKI-QDRVHF 343 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~-----~~~~~l~~~~~~~~l-~~~V~~ 343 (396)
+.+++.+|..+.....+.+.+.+..+.+.+++ .+|+.++++++..+.... .....+.+.++++-- ..++.|
T Consensus 96 d~vvi~~G~ND~~~~~~~~~~~l~~~i~~l~~---~~p~~~iil~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~v~~ 172 (229)
T 1fxw_F 96 KVIVVWVGTNNHENTAEEVAGGIEAIVQLINT---RQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQL 172 (229)
T ss_dssp SEEEEECCTTCTTSCHHHHHHHHHHHHHHHHH---HCTTCEEEEECCCCCSSSCCHHHHHHHHHHHHHHHHSSSSSSEEE
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH---HCCCCeEEEEeCCCCCCchhhHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 46666677666556677777777777777765 247899999886543221 233344555554322 357888
Q ss_pred ecC
Q 016053 344 VNK 346 (396)
Q Consensus 344 ~g~ 346 (396)
+..
T Consensus 173 iD~ 175 (229)
T 1fxw_F 173 LDT 175 (229)
T ss_dssp ECC
T ss_pred EeC
Confidence 764
No 351
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=36.28 E-value=1e+02 Score=30.58 Aligned_cols=45 Identities=22% Similarity=0.054 Sum_probs=33.2
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
+....+.+||+++.... ..-+.-+..+..+|++.|++|.+++...
T Consensus 531 ~~~~l~grKVaILvadG--~fE~~El~~p~~aL~~aGa~V~vVsp~~ 575 (688)
T 3ej6_A 531 SLPTIATLRVGVLSTTK--GGSLDKAKALKEQLEKDGLKVTVIAEYL 575 (688)
T ss_dssp CCSCCTTCEEEEECCSS--SSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCccCCEEEEEccCC--CccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 33455668999987421 1334778889999999999999998653
No 352
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=36.24 E-value=50 Score=28.83 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=28.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+.+. .-...|-.+...+|+.+|+++|.+|.++-.+
T Consensus 41 ~~vI~v~-~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4555555 4333455589999999999999999999743
No 353
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=36.15 E-value=74 Score=27.46 Aligned_cols=96 Identities=10% Similarity=0.121 Sum_probs=46.5
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--hhhhhh-ccC
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--QETINT-ALK 150 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~ 150 (396)
+|+|++..... ..=..+++.|.+.|++|.+++........+........+...++.++.... ...+.. ..+
T Consensus 4 ~~~ilVtGatG------~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATG------YIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTS------TTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCc------HHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 45677665322 233466778888999999887443211001000011122334666654332 222222 246
Q ss_pred CcEEEEcCch-----hhHHHHHHHhcC-CCc
Q 016053 151 ADLIVLNTAV-----AGKWLDAVLKED-VPR 175 (396)
Q Consensus 151 ~DiV~~~~~~-----~~~~~~~~~~~~-~~~ 175 (396)
+|+|+..... ....+..+.+.+ +++
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~ 108 (308)
T 1qyc_A 78 VDVVISTVGSLQIESQVNIIKAIKEVGTVKR 108 (308)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHHHHHCCCSE
T ss_pred CCEEEECCcchhhhhHHHHHHHHHhcCCCce
Confidence 8988766532 122344555555 543
No 354
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=36.06 E-value=1.7e+02 Score=25.88 Aligned_cols=85 Identities=8% Similarity=0.021 Sum_probs=46.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
+++||.+|.. |. .-..+++.|.+. |+++..++...+. . ........+...+ .....+....++
T Consensus 3 ~~~rvgiiG~----G~---~g~~~~~~l~~~~~~~l~av~d~~~~----~---~~~~a~~~g~~~~--~~~~~~l~~~~~ 66 (344)
T 3euw_A 3 LTLRIALFGA----GR---IGHVHAANIAANPDLELVVIADPFIE----G---AQRLAEANGAEAV--ASPDEVFARDDI 66 (344)
T ss_dssp CCEEEEEECC----SH---HHHHHHHHHHHCTTEEEEEEECSSHH----H---HHHHHHTTTCEEE--SSHHHHTTCSCC
T ss_pred CceEEEEECC----cH---HHHHHHHHHHhCCCcEEEEEECCCHH----H---HHHHHHHcCCcee--CCHHHHhcCCCC
Confidence 4568999873 22 233456666664 7888866654321 1 1111222343333 344455555689
Q ss_pred cEEEEcCchhhH--HHHHHHhcCC
Q 016053 152 DLIVLNTAVAGK--WLDAVLKEDV 173 (396)
Q Consensus 152 DiV~~~~~~~~~--~~~~~~~~~~ 173 (396)
|+|++.++.... ....+...+.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk 90 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGI 90 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCC
Confidence 999988865432 3344555553
No 355
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.98 E-value=1.1e+02 Score=26.95 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=43.1
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--------- 142 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 142 (396)
++||+++.+ |...-+..|..+.+.. +.+|..+.+..+. ........|++++..+..
T Consensus 105 ~~ri~vl~S-----g~g~nl~~ll~~~~~g~l~~~I~~Visn~~~--------~~~~A~~~gIp~~~~~~~~~~r~~~~~ 171 (302)
T 3o1l_A 105 KKRVVLMAS-----RESHCLADLLHRWHSDELDCDIACVISNHQD--------LRSMVEWHDIPYYHVPVDPKDKEPAFA 171 (302)
T ss_dssp CCEEEEEEC-----SCCHHHHHHHHHHHTTCSCSEEEEEEESSST--------THHHHHTTTCCEEECCCCSSCCHHHHH
T ss_pred CcEEEEEEe-----CCchhHHHHHHHHHCCCCCcEEEEEEECcHH--------HHHHHHHcCCCEEEcCCCcCCHHHHHH
Confidence 457777663 2224566777766553 4688776655443 333456678888765311
Q ss_pred --hhhhhccCCcEEEEcC
Q 016053 143 --ETINTALKADLIVLNT 158 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 172 ~~~~~l~~~~~DliVlag 189 (302)
T 3o1l_A 172 EVSRLVGHHQADVVVLAR 189 (302)
T ss_dssp HHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHhCCCEEEHhH
Confidence 1233457999998876
No 356
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=35.91 E-value=1.9e+02 Score=26.02 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=30.1
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
+..+|+++... ......++.++...|.+|+++++..-
T Consensus 187 ~glkva~vGD~------~nva~Sl~~~l~~lG~~v~~~~P~~~ 223 (353)
T 3sds_A 187 EGLKIAWVGDA------NNVLFDLAIAATKMGVNVAVATPRGY 223 (353)
T ss_dssp TTCEEEEESCC------CHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CCCEEEEECCC------chHHHHHHHHHHHcCCEEEEECCccc
Confidence 55689988753 25899999999999999999997654
No 357
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=35.84 E-value=26 Score=30.23 Aligned_cols=36 Identities=11% Similarity=-0.072 Sum_probs=27.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.+|++++...+.|| --.-.++.|...|++|+|+...
T Consensus 86 ~~vlVlcG~GNNGG---DGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGA---QGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHH---HHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHH---HHHHHHHHHHHCCCeEEEEEec
Confidence 37998887555555 3356688899999999998754
No 358
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=35.83 E-value=21 Score=32.79 Aligned_cols=45 Identities=18% Similarity=-0.040 Sum_probs=30.2
Q ss_pred ccccccEEEEEeccCCC-CChH-HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 70 SFMKSKLVLLVSHELSL-SGGP-LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
+.|+++||+++....+. -... .....++++|.+.||+|..+....
T Consensus 18 ~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 64 (386)
T 3e5n_A 18 GHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDK 64 (386)
T ss_dssp ---CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred hhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECC
Confidence 46778899999854332 1111 556688899999999999988443
No 359
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=35.73 E-value=83 Score=25.12 Aligned_cols=73 Identities=14% Similarity=0.035 Sum_probs=40.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+.+|+++|.....+- +.-+..-...|++.|++|++++..... . ....|+.+........+ ...++|
T Consensus 6 ~t~~~v~il~~~gFe--~~E~~~p~~~l~~ag~~V~~~s~~~~~--------v---~~~~G~~v~~d~~l~~v-~~~~yD 71 (177)
T 4hcj_A 6 KTNNILYVMSGQNFQ--DEEYFESKKIFESAGYKTKVSSTFIGT--------A---QGKLGGMTNIDLLFSEV-DAVEFD 71 (177)
T ss_dssp CCCEEEEECCSEEEC--HHHHHHHHHHHHHTTCEEEEEESSSEE--------E---EETTSCEEEECEEGGGC-CGGGCS
T ss_pred cCCCEEEEECCCCcc--HHHHHHHHHHHHHCCCEEEEEECCCCe--------E---eeCCCCEEecCccHHHC-CHhHCC
Confidence 345666554322221 244555667788999999999865431 1 12345555443332222 235789
Q ss_pred EEEEcCc
Q 016053 153 LIVLNTA 159 (396)
Q Consensus 153 iV~~~~~ 159 (396)
+|++...
T Consensus 72 ~liiPGG 78 (177)
T 4hcj_A 72 AVVFVGG 78 (177)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9988754
No 360
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=35.64 E-value=1.7e+02 Score=24.16 Aligned_cols=73 Identities=14% Similarity=0.118 Sum_probs=43.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCC--CEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch----------
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ---------- 142 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 142 (396)
+||+++.+ |...-+..|.++.++.. .+|.++..+++. .+..+.....|++++.....
T Consensus 3 ~riavl~S-----g~Gsnl~ali~~~~~~~l~~eI~~Visn~~~------a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~ 71 (211)
T 3p9x_A 3 KRVAIFAS-----GSGTNAEAIIQSQKAGQLPCEVALLITDKPG------AKVVERVKVHEIPVCALDPKTYPSKEAYEI 71 (211)
T ss_dssp CEEEEECC-----TTCHHHHHHHHHHHTTCCSSEEEEEEESCSS------SHHHHHHHTTTCCEEECCGGGSSSHHHHHH
T ss_pred CEEEEEEe-----CCchHHHHHHHHHHcCCCCcEEEEEEECCCC------cHHHHHHHHcCCCEEEeChhhcCchhhhHH
Confidence 57877763 22256777777766532 577765544332 12344556678887654321
Q ss_pred --hhhhhccCCcEEEEcC
Q 016053 143 --ETINTALKADLIVLNT 158 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 72 ~~~~~l~~~~~Dliv~ag 89 (211)
T 3p9x_A 72 EVVQQLKEKQIDFVVLAG 89 (211)
T ss_dssp HHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHhcCCCEEEEeC
Confidence 1223458999999876
No 361
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=35.46 E-value=26 Score=27.62 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=24.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+|+++.. ...|..+.....+++.|.+.|++|.++.
T Consensus 11 ki~I~Y~-S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 45 (167)
T 1ykg_A 11 GITIISA-SQTGNARRVAEALRDDLLAAKLNVKLVN 45 (167)
T ss_dssp -CEEEEE-CSSSHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred eEEEEEE-CCchHHHHHHHHHHHHHHHCCCceEEee
Confidence 5555542 1235566899999999999899888775
No 362
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=35.35 E-value=2.1e+02 Score=25.51 Aligned_cols=91 Identities=10% Similarity=0.123 Sum_probs=54.3
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHhc
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQK 335 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~~ 335 (396)
---+++.+|.+-+...|.|+|-. ...=..-++.++.. -++++.++|+..- .+.+..+.+++.+++.
T Consensus 142 l~Ti~e~~g~~l~gl~va~vGD~-~~~va~Sl~~~~~~------------~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~ 208 (335)
T 1dxh_A 142 VLTMREHSDKPLHDISYAYLGDA-RNNMGNSLLLIGAK------------LGMDVRIAAPKALWPHDEFVAQCKKFAEES 208 (335)
T ss_dssp HHHHHHTCSSCGGGCEEEEESCC-SSHHHHHHHHHHHH------------TTCEEEEECCGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCeEEEEecCC-ccchHHHHHHHHHH------------cCCEEEEECCcccCCCHHHHHHHHHHHHHc
Confidence 34466777622345789999985 22223334444433 2789999997431 1122334455666666
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
| ..+.+. +++.+.+..+||+.....
T Consensus 209 G--~~v~~~---~d~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 209 G--AKLTLT---EDPKEAVKGVDFVHTDVW 233 (335)
T ss_dssp T--CEEEEE---SCHHHHTTTCSEEEECCC
T ss_pred C--CeEEEE---eCHHHHhCCCCEEEeCCc
Confidence 6 235443 678899999999877443
No 363
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=35.30 E-value=30 Score=29.98 Aligned_cols=36 Identities=17% Similarity=-0.005 Sum_probs=27.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|++++...+.|| --.-.++.|.+.|++|+|+...
T Consensus 80 ~~VlVlcG~GNNGG---DGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGG---DGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHH---HHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHH---HHHHHHHHHHHCCCcEEEEEeC
Confidence 37998887655555 3356688899999999998754
No 364
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=35.28 E-value=61 Score=26.51 Aligned_cols=40 Identities=18% Similarity=-0.030 Sum_probs=26.9
Q ss_pred cccccEEEEEeccCCC-C----ChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 71 FMKSKLVLLVSHELSL-S----GGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~-g----G~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.|++++|.+++..... . -......++++.|.++|+. |++.
T Consensus 20 ~~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~--vVsG 64 (195)
T 1rcu_A 20 QGHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYL--VFNG 64 (195)
T ss_dssp ---CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCE--EEEC
T ss_pred cCCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCE--EEeC
Confidence 3445689999865322 2 3458999999999999875 4454
No 365
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=35.27 E-value=39 Score=29.40 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=27.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
+.|+||++. || ......++.|.+.|++|+|+.+..
T Consensus 12 ~~k~VLVVG-----gG--~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIG-----GG--EVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEE-----ES--HHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEEC-----Cc--HHHHHHHHHHHhCCCEEEEEcCCC
Confidence 456888876 34 688888899999999999998643
No 366
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=35.25 E-value=31 Score=29.34 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=26.4
Q ss_pred EEEEEeccCCCCChH--HHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+++.+.+ ..||.. ....+|+..|+++|++|.++-.+
T Consensus 7 ~vI~v~s--~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 7 RRIALAN--QKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp CEEEECC--SSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEEe--CCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 4555553 334444 88999999999999999998633
No 367
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=35.22 E-value=49 Score=24.52 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=23.6
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++++|+++.. -+.....+...|.+.|++|..+.
T Consensus 1 M~~~~ilivdd------~~~~~~~l~~~l~~~g~~v~~~~ 34 (143)
T 3jte_A 1 MSLAKILVIDD------ESTILQNIKFLLEIDGNEVLTAS 34 (143)
T ss_dssp --CCEEEEECS------CHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCEEEEEcC------CHHHHHHHHHHHHhCCceEEEeC
Confidence 56679999874 23566667788888999887554
No 368
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.13 E-value=50 Score=27.56 Aligned_cols=33 Identities=21% Similarity=0.040 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 8 k~vlVT-----Gas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVY-----GGRGALGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEE-----CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 455566 343456677899999999999888743
No 369
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=35.10 E-value=2.1e+02 Score=24.45 Aligned_cols=60 Identities=13% Similarity=-0.019 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCH--HHHHHH
Q 016053 285 QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTV--APYLAA 356 (396)
Q Consensus 285 ~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~--~~~~~~ 356 (396)
.+...+++.++.+. +++...+++.++. .-..+.+.+++.|+++.|.++|+-... .+++..
T Consensus 166 ~~~~~~~~~~~l~~-------~~~~~ai~~~~d~-----~a~g~~~al~~~G~p~dv~vvg~d~~~~~~~~~~~ 227 (313)
T 2h3h_A 166 GARAVSLAEAALNA-------HPDLDAFFGVYAY-----NGPAQALVVKNAGKVGKVKIVCFDTTPDILQYVKE 227 (313)
T ss_dssp HHHHHHHHHHHHHH-------CTTCCEEEECSTT-----HHHHHHHHHHHTTCTTTSEEEEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------CcCceEEEEcCCC-----ccHHHHHHHHHcCCCCCeEEEEeCCCHHHHHHHHc
Confidence 34444555554431 2667778877643 444566777788888889999975332 345543
No 370
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=35.07 E-value=52 Score=29.17 Aligned_cols=42 Identities=14% Similarity=-0.081 Sum_probs=29.1
Q ss_pred CHHHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCCCC
Q 016053 349 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSELH 392 (396)
Q Consensus 349 ~~~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~gG 392 (396)
++.+++..+|+++..+. ...---.+.+++..|++||+....+
T Consensus 51 d~~~ll~~~DvViiatp--~~~h~~~~~~al~aG~~Vv~ekp~~ 92 (320)
T 1f06_A 51 DVDKHADDVDVLFLCMG--SATDIPEQAPKFAQFACTVDTYDNH 92 (320)
T ss_dssp GGGGTTTTCSEEEECSC--TTTHHHHHHHHHTTTSEEECCCCCG
T ss_pred CHHHHhcCCCEEEEcCC--cHHHHHHHHHHHHCCCEEEECCCCc
Confidence 34444578999998776 4333334568899999999887654
No 371
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=35.07 E-value=28 Score=29.18 Aligned_cols=35 Identities=9% Similarity=-0.039 Sum_probs=27.2
Q ss_pred cEEEEEeccCCCCChH--HHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|||++ +. .||.. ....+|+..|+++|++|.++-.+
T Consensus 1 mkI~v-s~---kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AG---KGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-EC---SSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ec---CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46777 42 45554 88899999999999999998744
No 372
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=35.07 E-value=28 Score=32.00 Aligned_cols=44 Identities=14% Similarity=-0.068 Sum_probs=29.9
Q ss_pred ccccccEEEEEeccCCC-CCh-HHHHHHHHHHHHhCCCEEEEEecc
Q 016053 70 SFMKSKLVLLVSHELSL-SGG-PLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~-gG~-~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
..|++|||+++....+. -.. -....+++++|.+.||+|..+...
T Consensus 33 ~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 33 GSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp ----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred ccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 35677899999954333 111 167788899999999999998844
No 373
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=34.83 E-value=42 Score=28.80 Aligned_cols=34 Identities=18% Similarity=0.053 Sum_probs=24.0
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
+.|+.+|+ ||..-.=..+++.|.+.|++|.++..
T Consensus 3 ~~k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 3 MDKVILIT-----GASGGIGEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp TTCEEEES-----STTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEe-----CCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 34566676 34344667788999999999888763
No 374
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=34.78 E-value=1.1e+02 Score=27.03 Aligned_cols=111 Identities=12% Similarity=0.107 Sum_probs=0.0
Q ss_pred EecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEE
Q 016053 235 VHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 314 (396)
Q Consensus 235 I~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~iv 314 (396)
|-|+-|.+...|. +.-.+---+++.+| +-+...|.|+|-+....=...++.++..+ +++++.++
T Consensus 121 VINag~g~~~HPt----Q~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~-----------~G~~v~~~ 184 (306)
T 4ekn_B 121 IINAGDGSNQHPT----QTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLF-----------ENVEMYFV 184 (306)
T ss_dssp EEESCSSSSCCHH----HHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTS-----------SSCEEEEE
T ss_pred EEeCCCCCCcCcH----HHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhc-----------CCCEEEEE
Q ss_pred ecCCCccchHH--HHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCcc
Q 016053 315 GSDMNAQTKFE--SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 315 G~g~~~~~~~~--~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
++.. +. +.+.+.+++.|..-.+ .+++.+.+..|||+.....- .|.|+
T Consensus 185 ~P~~-----~~~~~~~~~~~~~~g~~~~~-----~~d~~eav~~aDvvy~~~~q-~er~~ 233 (306)
T 4ekn_B 185 SPKE-----LRLPKDIIEDLKAKNIKFYE-----KESLDDLDDDIDVLYVTRIQ-KERFP 233 (306)
T ss_dssp CCGG-----GCCCHHHHHHHHHTTCCEEE-----ESCGGGCCTTCSEEEECCCC-GGGCC
T ss_pred CCcc-----cccCHHHHHHHHHcCCEEEE-----EcCHHHHhcCCCEEEeCCcc-cccCC
No 375
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=34.76 E-value=58 Score=26.69 Aligned_cols=35 Identities=11% Similarity=0.019 Sum_probs=26.1
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEE
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi 110 (396)
|++.|++.-...|=.....+|+.+|+++|++|.++
T Consensus 2 k~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44555544444555689999999999999999986
No 376
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=34.70 E-value=23 Score=32.21 Aligned_cols=42 Identities=14% Similarity=-0.057 Sum_probs=29.3
Q ss_pred ccccEEEEEeccCCC-CChH-HHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSL-SGGP-LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|++|||+++....+. -... .....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 567799999854333 1111 55668889999999999998844
No 377
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=34.69 E-value=49 Score=29.03 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=30.5
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++++.|++.....|-.....+|+..|++.|.+|.++-.+
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 466667655545566789999999999999999998744
No 378
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=34.41 E-value=40 Score=24.19 Aligned_cols=78 Identities=13% Similarity=0.184 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcCEEEe
Q 016053 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 362 (396)
Q Consensus 283 Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aDv~v~ 362 (396)
.|.....++++. ...+|+|+-...+. .....+..+++..+++ +.+++..+++-..+...-..++
T Consensus 22 ~G~~~v~kai~~------------gka~lViiA~D~~~--~~~~~i~~~c~~~~vp--~~~~~s~~eLG~A~Gk~~~~~~ 85 (101)
T 3v7q_A 22 SGEDLVIKEIRN------------ARAKLVLLTEDASS--NTAKKVTDKCNYYKVP--YKKVESRAVLGRSIGKEARVVV 85 (101)
T ss_dssp ESHHHHHHHHHT------------TCCSEEEEETTSCH--HHHHHHHHHHHHTTCC--EEEESCHHHHHHHTTSSCCSEE
T ss_pred cchhhhHHHHhc------------CceeEEEEeccccc--cchhhhcccccccCCC--eeeechHHHHHhhhCccceEEE
Confidence 355777777754 46777777765432 2566788888888876 6666766777777666422223
Q ss_pred cCCCCCCCccHHHHHH
Q 016053 363 NSQAWGECFGRITIEA 378 (396)
Q Consensus 363 pS~~~~E~fg~~~lEA 378 (396)
.-. .+||.-.+.+-
T Consensus 86 ai~--D~g~a~~i~~~ 99 (101)
T 3v7q_A 86 AVT--DQGFANKLISL 99 (101)
T ss_dssp EEC--CHHHHHHHHHH
T ss_pred EEe--ccHHHHHHHHh
Confidence 333 56666555543
No 379
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=34.21 E-value=41 Score=29.31 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=24.9
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+|+|++.. |....=..+++.|.++|++|.+++..
T Consensus 2 ~~~vlVtG------atG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTG------GTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC------CCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35776543 33456678888999999999999854
No 380
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=34.19 E-value=2.2e+02 Score=24.19 Aligned_cols=38 Identities=8% Similarity=-0.182 Sum_probs=25.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.+|.++.+.....-.......+.+++.+.|+++.++..
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV 40 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 47888887543322235566666777788999987754
No 381
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=34.13 E-value=68 Score=26.02 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=27.4
Q ss_pred ccEEEEEeccCCCCChH-HHHHHHHH----HHHhC--CCEEEEEe
Q 016053 74 SKLVLLVSHELSLSGGP-LLLMELAF----LLRGV--GTKVNWIT 111 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~-~~~~~l~~----~L~~~--G~~V~vi~ 111 (396)
++||++++.....+|.. ..+..+++ .|.+. |++|.++-
T Consensus 11 ~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~id 55 (191)
T 3k1y_A 11 MRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIE 55 (191)
T ss_dssp SEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEE
Confidence 46899999877777765 44555566 56666 78999887
No 382
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=34.04 E-value=1.9e+02 Score=23.52 Aligned_cols=74 Identities=15% Similarity=0.277 Sum_probs=43.0
Q ss_pred CEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccc-----hHHHHHHHHHHh-cCCCCcEEE
Q 016053 270 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT-----KFESELRNYVMQ-KKIQDRVHF 343 (396)
Q Consensus 270 ~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~-----~~~~~l~~~~~~-~~l~~~V~~ 343 (396)
+.+++.+|..+.....+.+.+.+..+.+.+++ .+|+.+++++|..+.... .....+.+.+++ ..-..++.|
T Consensus 95 d~vvi~~G~ND~~~~~~~~~~~l~~~i~~l~~---~~p~~~ii~~~~~p~~~~~~~~~~~~~~~n~~l~~~~a~~~~v~~ 171 (232)
T 1es9_A 95 KIVVVWVGTNNHGHTAEQVTGGIKAIVQLVNE---RQPQARVVVLGLLPRGQHPNPLREKNRRVNELVRAALAGHPRAHF 171 (232)
T ss_dssp SEEEEECCTTCTTSCHHHHHHHHHHHHHHHHH---HSTTCEEEEECCCCCSSSCCHHHHHHHHHHHHHHHHHHSCTTEEE
T ss_pred CEEEEEeecCCCCCCHHHHHHHHHHHHHHHHH---HCCCCeEEEecCCCCCCCchhHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 45666666655445667777777777766665 347899999987553221 122333344433 222356888
Q ss_pred ecC
Q 016053 344 VNK 346 (396)
Q Consensus 344 ~g~ 346 (396)
+..
T Consensus 172 iD~ 174 (232)
T 1es9_A 172 LDA 174 (232)
T ss_dssp ECC
T ss_pred EeC
Confidence 764
No 383
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=33.99 E-value=1.6e+02 Score=22.70 Aligned_cols=12 Identities=0% Similarity=-0.028 Sum_probs=6.1
Q ss_pred cCCCEEEcCCCC
Q 016053 381 FQLPVLVLSELH 392 (396)
Q Consensus 381 ~G~PVI~t~~gG 392 (396)
.|+++.....+|
T Consensus 81 ~gk~v~~fgs~g 92 (161)
T 3hly_A 81 NKQAIGLFDSYG 92 (161)
T ss_dssp TTSEEEEECCCC
T ss_pred CCCEEEEEEcCC
Confidence 455555554443
No 384
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=33.96 E-value=47 Score=32.49 Aligned_cols=37 Identities=19% Similarity=0.145 Sum_probs=24.7
Q ss_pred cccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 69 ~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
..+|+...|++|. ||. .=..+|..|++.|++|+++-.
T Consensus 18 ~~~M~~~DVvIVG-----gG~--AGl~aA~~Lar~G~~V~LiEr 54 (591)
T 3i3l_A 18 GSHMTRSKVAIIG-----GGP--AGSVAGLTLHKLGHDVTIYER 54 (591)
T ss_dssp --CCCCCEEEEEC-----CSH--HHHHHHHHHHHTTCEEEEECS
T ss_pred cCcCCCCCEEEEC-----cCH--HHHHHHHHHHcCCCCEEEEcC
Confidence 3455567899887 442 334456677888999999964
No 385
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=33.88 E-value=1.7e+02 Score=24.90 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=22.8
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+.....+| .=..+++.|.++|++|.++...
T Consensus 27 k~vlVTGasg~~G---IG~~ia~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKS---IAYGIAKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTC---HHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCC---HHHHHHHHHHHcCCEEEEeeCc
Confidence 4555663222223 5567888899999998888744
No 386
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=33.62 E-value=90 Score=27.51 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=21.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEE
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi 110 (396)
.+|||+++.. | ..=..++..|.+.|++|+++
T Consensus 18 ~~~kI~IiGa-----G--a~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGA-----G--AVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESC-----S--HHHHHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECc-----C--HHHHHHHHHHHHCCCeEEEE
Confidence 4468998862 3 34455677788899999998
No 387
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=33.49 E-value=55 Score=28.80 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=25.7
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
..++|+|.+|.. | ..=..++..|.+.||+|+++.
T Consensus 18 ~~~m~~I~iIG~-----G--~mG~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 18 GSHMMEVGFLGL-----G--IMGKAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CCCSCEEEEECC-----S--HHHHHHHHHHHHTTCEEEEEC
T ss_pred cccCCEEEEECc-----c--HHHHHHHHHHHHCCCeEEEEe
Confidence 445579999862 3 566678888999999999875
No 388
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=33.49 E-value=50 Score=28.14 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=26.1
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+.. |.. .-+..|.++|++.| +|+|+.+...
T Consensus 1 M~ILlTNDD----Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (244)
T 2e6c_A 1 MRILVTNDD----GIYSPGLWALAEAASQFG-EVFVAAPDTE 37 (244)
T ss_dssp CEEEEECSS----CTTCHHHHHHHHHHTTTS-EEEEEEECSS
T ss_pred CeEEEEcCC----CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 478876653 332 66888889999888 9999996543
No 389
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=33.34 E-value=49 Score=24.31 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=23.9
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++++|+++... ......+...|.+.|++|..+.
T Consensus 1 m~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 34 (140)
T 2qr3_A 1 MSLGTIIIVDDN------KGVLTAVQLLLKNHFSKVITLS 34 (140)
T ss_dssp -CCCEEEEECSC------HHHHHHHHHHHTTTSSEEEEEC
T ss_pred CCCceEEEEeCC------HHHHHHHHHHHHhCCcEEEEeC
Confidence 556789988742 3556667778888899887554
No 390
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=33.26 E-value=54 Score=28.56 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=30.6
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.|++.+++.....|-.....+|+..|++.|.+|.++-.+
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 356666655555666799999999999999999999744
No 391
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=33.23 E-value=1.1e+02 Score=27.05 Aligned_cols=77 Identities=13% Similarity=0.042 Sum_probs=41.9
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCch-hhhhhhhhhhhhcceEEEEcCchh-----hhhhc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEED-EVIYSLEHKMWDRGVQVISAKGQE-----TINTA 148 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 148 (396)
|||+|..+ ..+...-.++|.+.||+|..+....+.... ....+..+.....|++++...... ...+.
T Consensus 1 mrivf~gt-------~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~ 73 (305)
T 2bln_A 1 MKTVVFAY-------HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQ 73 (305)
T ss_dssp CEEEEEEC-------HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHH
T ss_pred CEEEEEEc-------CHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHh
Confidence 46777653 233444456666679999866643322111 111224445566788887654321 23345
Q ss_pred cCCcEEEEcC
Q 016053 149 LKADLIVLNT 158 (396)
Q Consensus 149 ~~~DiV~~~~ 158 (396)
.++|++++-.
T Consensus 74 ~~~Dliv~~~ 83 (305)
T 2bln_A 74 LSPDVIFSFY 83 (305)
T ss_dssp TCCSEEEEES
T ss_pred cCCCEEEEec
Confidence 7999998764
No 392
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=33.07 E-value=50 Score=25.13 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=23.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEE
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~ 108 (396)
.+++++|+++.. -+.....+...|.+.|++|.
T Consensus 33 ~~~~~~Ilivdd------~~~~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 33 TGIPFNVLIVDD------SVFTVKQLTQIFTSEGFNII 64 (157)
T ss_dssp TTEECEEEEECS------CHHHHHHHHHHHHHTTCEEE
T ss_pred CCCceEEEEEeC------CHHHHHHHHHHHHhCCCeEE
Confidence 345568999874 23566667778888899986
No 393
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=33.01 E-value=2.6e+02 Score=24.87 Aligned_cols=91 Identities=11% Similarity=0.134 Sum_probs=55.0
Q ss_pred HHHHHHH-cCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHh
Q 016053 257 REHVRES-LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQ 334 (396)
Q Consensus 257 ~~~~r~~-~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~ 334 (396)
---+++. +|-+-+...|.|+|-. ...=..-++.++..+ ++++.++|+..- .+.+..+.+++.+++
T Consensus 141 l~Ti~e~~~g~~l~gl~ia~vGD~-~~~va~Sl~~~~~~~------------G~~v~~~~P~~~~p~~~~~~~~~~~a~~ 207 (333)
T 1duv_G 141 LLTMQEHLPGKAFNEMTLVYAGDA-RNNMGNSMLEAAALT------------GLDLRLVAPQACWPEAALVTECRALAQQ 207 (333)
T ss_dssp HHHHHHHSTTCCGGGCEEEEESCT-TSHHHHHHHHHHHHH------------CCEEEEECCGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCcEEEEECCC-ccchHHHHHHHHHHc------------CCEEEEECCcccCCCHHHHHHHHHHHHH
Confidence 3456777 6622355789999985 222233444444432 689999997431 112233445666667
Q ss_pred cCCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 335 KKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 335 ~~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
.| ..+.+. +++.+.+..|||+.....
T Consensus 208 ~G--~~v~~~---~d~~eav~~aDvvytd~w 233 (333)
T 1duv_G 208 NG--GNITLT---EDVAKGVEGADFIYTDVW 233 (333)
T ss_dssp TT--CEEEEE---SCHHHHHTTCSEEEECCS
T ss_pred cC--CeEEEE---ECHHHHhCCCCEEEeCCc
Confidence 66 345443 678899999999887543
No 394
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=33.01 E-value=83 Score=24.65 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=41.5
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHh-CCC--EEEEEeccCCC-C-chhhhhhhhhhhhhcceEEEEcCchhhhh-
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGT--KVNWITIQKPS-E-EDEVIYSLEHKMWDRGVQVISAKGQETIN- 146 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~--~V~vi~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (396)
++++||||+....- -......+.+.+.. .|. ++.+.+..... . -.+........+...|+++- ...+.+.
T Consensus 3 ~~~~VLFVC~gN~c--RSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s--~~ar~l~~ 78 (161)
T 2cwd_A 3 RPVRVLFVCLGNIC--RSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP--HVARRLTR 78 (161)
T ss_dssp CCEEEEEEESSSSS--HHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC--CCCCBCCH
T ss_pred CCCEEEEECCCcHH--HHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc--ccccCCCH
Confidence 34699999964333 22555555555553 242 45566522111 0 11112222334555677653 2222232
Q ss_pred -hccCCcEEEEcCc
Q 016053 147 -TALKADLIVLNTA 159 (396)
Q Consensus 147 -~~~~~DiV~~~~~ 159 (396)
....+|+|++-+.
T Consensus 79 ~~~~~~DlIi~M~~ 92 (161)
T 2cwd_A 79 EDVLAYDHILVMDR 92 (161)
T ss_dssp HHHHHCSEEEESSH
T ss_pred hHhccCCEEEECCh
Confidence 2357899998764
No 395
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.94 E-value=58 Score=28.42 Aligned_cols=31 Identities=19% Similarity=0.179 Sum_probs=20.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhC-----C-CEEEEEec
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-----G-TKVNWITI 112 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-----G-~~V~vi~~ 112 (396)
|||+++. .| ..=..++..|.+. | ++|+++..
T Consensus 9 m~I~iiG-----~G--~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFG-----LG--GVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEEC-----CS--HHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEEC-----cC--HHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899886 23 2233456666666 9 99998853
No 396
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.72 E-value=61 Score=28.44 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=24.9
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
.++.|+||+. ||....=..+++.|.++|++|.++..
T Consensus 8 ~~~~~~vlVT------GatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVT------GANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEE------CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 3445677654 33345667788888899999998874
No 397
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=32.63 E-value=1.4e+02 Score=25.96 Aligned_cols=72 Identities=17% Similarity=0.126 Sum_probs=42.9
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--------- 142 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 142 (396)
++||+++.+ |...-+..|..+.+.. ..+|..+.+.++. ........|++++..+..
T Consensus 90 ~~ri~vl~S-----g~g~~l~~ll~~~~~g~l~~~i~~Visn~~~--------~~~~A~~~gIp~~~~~~~~~~r~~~~~ 156 (286)
T 3n0v_A 90 RPKVVIMVS-----KADHCLNDLLYRQRIGQLGMDVVAVVSNHPD--------LEPLAHWHKIPYYHFALDPKDKPGQER 156 (286)
T ss_dssp CCEEEEEES-----SCCHHHHHHHHHHHTTSSCCEEEEEEESSST--------THHHHHHTTCCEEECCCBTTBHHHHHH
T ss_pred CcEEEEEEe-----CCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH--------HHHHHHHcCCCEEEeCCCcCCHHHHHH
Confidence 457777663 2225666777766543 4677766655443 333456678888764321
Q ss_pred --hhhhhccCCcEEEEcC
Q 016053 143 --ETINTALKADLIVLNT 158 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 157 ~~~~~l~~~~~Dlivla~ 174 (286)
T 3n0v_A 157 KVLQVIEETGAELVILAR 174 (286)
T ss_dssp HHHHHHHHHTCSEEEESS
T ss_pred HHHHHHHhcCCCEEEecc
Confidence 1223457999998876
No 398
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=32.58 E-value=1.1e+02 Score=22.20 Aligned_cols=60 Identities=12% Similarity=-0.030 Sum_probs=42.0
Q ss_pred HHHHHHHHHhcCCCCcEEEecCc---CCH-HHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEEcCC
Q 016053 325 ESELRNYVMQKKIQDRVHFVNKT---LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLVLSE 390 (396)
Q Consensus 325 ~~~l~~~~~~~~l~~~V~~~g~~---~~~-~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~t~~ 390 (396)
.+.|++.++++|.+-.|.-.|.. +.+ .+-+..||++++... .+--. .|-. .|+||+-+++
T Consensus 22 AeaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~~AD~VIia~d--~~v~~---~~RF-~gk~v~~~~v 85 (106)
T 2m1z_A 22 AQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVD--TKVRN---KERF-DGKVVLEVPV 85 (106)
T ss_dssp HHHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHHHCSEEEEEES--SCCST---HHHH-TTSEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEEecCccccCCCCHHHHhhCCEEEEecc--ccccc---hhcc-CCCcEEEEcH
Confidence 46788899999988888888863 333 578899999998776 32211 2222 3889887765
No 399
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=32.57 E-value=73 Score=23.25 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCChHH-HHHHHHHHHHhCCCEEEEEe
Q 016053 73 KSKLVLLVSHELSLSGGPL-LLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~-~~~~l~~~L~~~G~~V~vi~ 111 (396)
+++||+++|.. .-|... ...++-+.+.+.|+++.+-.
T Consensus 20 ~~kkIlvvC~s--G~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGG--AVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCS--CSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCC--CHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 44689999952 223333 56888889999999876655
No 400
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=32.50 E-value=2.7e+02 Score=24.74 Aligned_cols=89 Identities=9% Similarity=0.064 Sum_probs=55.3
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCC-CccchHHHHHHHHHHhc
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-NAQTKFESELRNYVMQK 335 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~-~~~~~~~~~l~~~~~~~ 335 (396)
---+++.+|- -+...|.|+|-. ..=...++.++..+ ++++.++|+.. ..+.+..+..++.+++.
T Consensus 145 l~Ti~e~~g~-l~glkva~vGD~--~rva~Sl~~~~~~~------------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~ 209 (323)
T 3gd5_A 145 LLTIRENFGR-LAGLKLAYVGDG--NNVAHSLLLGCAKV------------GMSIAVATPEGFTPDPAVSARASEIAGRT 209 (323)
T ss_dssp HHHHHHHHSC-CTTCEEEEESCC--CHHHHHHHHHHHHH------------TCEEEEECCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCCEEEEECCC--CcHHHHHHHHHHHc------------CCEEEEECCCcccCCHHHHHHHHHHHHHc
Confidence 3456777773 356789999986 22234455555442 68999999743 22223444555556666
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
|. .+... +++.+.+..+||+.....
T Consensus 210 g~--~v~~~---~d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 210 GA--EVQIL---RDPFEAARGAHILYTDVW 234 (323)
T ss_dssp TC--CEEEE---SCHHHHHTTCSEEEECCC
T ss_pred CC--eEEEE---CCHHHHhcCCCEEEEece
Confidence 53 34332 578899999999876543
No 401
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=32.43 E-value=1.1e+02 Score=27.31 Aligned_cols=85 Identities=12% Similarity=-0.009 Sum_probs=45.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
++++||.+|.. |... ...+..|.+. |+++..++...+. . ........++..+ .....+....
T Consensus 11 ~~~~rvgiiG~----G~~g---~~~~~~l~~~~~~~~lvav~d~~~~----~---~~~~~~~~~~~~~--~~~~~ll~~~ 74 (354)
T 3q2i_A 11 DRKIRFALVGC----GRIA---NNHFGALEKHADRAELIDVCDIDPA----A---LKAAVERTGARGH--ASLTDMLAQT 74 (354)
T ss_dssp SSCEEEEEECC----STTH---HHHHHHHHHTTTTEEEEEEECSSHH----H---HHHHHHHHCCEEE--SCHHHHHHHC
T ss_pred CCcceEEEEcC----cHHH---HHHHHHHHhCCCCeEEEEEEcCCHH----H---HHHHHHHcCCcee--CCHHHHhcCC
Confidence 45679999984 2222 2344566654 7888767644321 1 1111222344332 3444555567
Q ss_pred CCcEEEEcCchhhH--HHHHHHhcC
Q 016053 150 KADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 150 ~~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
++|+|++.++.... ....+...+
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~g 99 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAG 99 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCC
Confidence 89999988865432 334445555
No 402
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=32.38 E-value=94 Score=23.98 Aligned_cols=82 Identities=12% Similarity=-0.009 Sum_probs=40.2
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh--hccCC
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TALKA 151 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (396)
+++||||+....- -......+.+.+.. +++|.-..... ....+........+...|+++-.. ..+.+. ...++
T Consensus 8 m~~VLFVC~gN~c--RSpmAEal~r~~~~-~~~v~SAGt~~-~~g~~~~p~a~~~l~e~Gid~~~~-~ar~l~~~~~~~~ 82 (150)
T 2wmy_A 8 FDSILVICTGNIC--RSPIGERLLRRLLP-SKKINSAGVGA-LVDHTADESAIRVAEKNGLCLKGH-RGTKFTSALARQY 82 (150)
T ss_dssp CCEEEEEESSSSS--HHHHHHHHHHHHCT-TSEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTC-CCCBCCHHHHTTC
T ss_pred cCEEEEEcCCchH--HHHHHHHHHHHhcC-CCEEEeccccC-CCCCCCCHHHHHHHHHcCCCccCC-cccCCCHHHhccC
Confidence 3589999964332 23566666666553 45544333211 111112222333455667765211 112222 23579
Q ss_pred cEEEEcCch
Q 016053 152 DLIVLNTAV 160 (396)
Q Consensus 152 DiV~~~~~~ 160 (396)
|+|++-+..
T Consensus 83 DlIi~m~~~ 91 (150)
T 2wmy_A 83 DLLLVMEYS 91 (150)
T ss_dssp SEEEESCHH
T ss_pred CEEEEcCHH
Confidence 999987643
No 403
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=32.29 E-value=1.3e+02 Score=24.04 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCc---CCHHHHHHHcC---EEEecCCC--CCCCccHHHHHHHhcCCCEEEcC
Q 016053 324 FESELRNYVMQKKIQDRVHFVNKT---LTVAPYLAAID---VLVQNSQA--WGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 324 ~~~~l~~~~~~~~l~~~V~~~g~~---~~~~~~~~~aD---v~v~pS~~--~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+...+.+.+++.|.+ +..+... +++.+.+...| +++.|... ...++-..+++++..|+|+++.-
T Consensus 12 ~~~~i~~~l~~~G~~--~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilGIC 83 (192)
T 1i1q_B 12 FTWNLADQLRTNGHN--VVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGIC 83 (192)
T ss_dssp SHHHHHHHHHHTTCE--EEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEEET
T ss_pred HHHHHHHHHHHCCCe--EEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchhCchHHHHHHHHhcCCCEEEEC
Confidence 566677777777754 5555443 33434443334 77776441 01234455788888899999754
No 404
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=32.20 E-value=51 Score=28.04 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=28.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+.+.+.-...|-.....+|+.+|+ +|++|.++-.+
T Consensus 27 ~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 27 PKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp CEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 466666644444555688999999999 99999999744
No 405
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=32.18 E-value=81 Score=27.44 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=38.0
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
+|+|.+|.. | ..=..++..|.+.||+|+++...... .+.+...|+.. ........ . .|+
T Consensus 15 ~~~I~vIG~-----G--~mG~~~A~~l~~~G~~V~~~dr~~~~---------~~~~~~~g~~~--~~~~~~~~--~-aDv 73 (296)
T 3qha_A 15 QLKLGYIGL-----G--NMGAPMATRMTEWPGGVTVYDIRIEA---------MTPLAEAGATL--ADSVADVA--A-ADL 73 (296)
T ss_dssp CCCEEEECC-----S--TTHHHHHHHHTTSTTCEEEECSSTTT---------SHHHHHTTCEE--CSSHHHHT--T-SSE
T ss_pred CCeEEEECc-----C--HHHHHHHHHHHHCCCeEEEEeCCHHH---------HHHHHHCCCEE--cCCHHHHH--h-CCE
Confidence 568998863 2 23345688888999999888533221 11222334432 11222222 3 899
Q ss_pred EEEcCchh
Q 016053 154 IVLNTAVA 161 (396)
Q Consensus 154 V~~~~~~~ 161 (396)
|+...+..
T Consensus 74 vi~~vp~~ 81 (296)
T 3qha_A 74 IHITVLDD 81 (296)
T ss_dssp EEECCSSH
T ss_pred EEEECCCh
Confidence 99887643
No 406
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=32.16 E-value=1.5e+02 Score=27.88 Aligned_cols=98 Identities=9% Similarity=0.039 Sum_probs=59.7
Q ss_pred CCEEEEEEecccCCCCH--HHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecC
Q 016053 269 EDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 346 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~--~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 346 (396)
+.+.|+++|-=. .-|. ...++++..+ .++++++-+-+- ..+..++.+++++.++ +..
T Consensus 38 ~~irvgiIG~g~-~GG~~g~~h~~~l~~~----------~~~~~lvav~d~------~~~~a~~~a~~~g~~~-~~~--- 96 (479)
T 2nvw_A 38 RPIRVGFVGLTS-GKSWVAKTHFLAIQQL----------SSQFQIVALYNP------TLKSSLQTIEQLQLKH-ATG--- 96 (479)
T ss_dssp CCEEEEEECCCS-TTSHHHHTHHHHHHHT----------TTTEEEEEEECS------CHHHHHHHHHHTTCTT-CEE---
T ss_pred CcCEEEEEcccC-CCCHHHHHHHHHHHhc----------CCCeEEEEEEeC------CHHHHHHHHHHcCCCc-cee---
Confidence 357788887621 1121 2234444431 157887755553 3456677777777642 111
Q ss_pred cCCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcC------CCEEEcC
Q 016053 347 TLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQ------LPVLVLS 389 (396)
Q Consensus 347 ~~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G------~PVI~t~ 389 (396)
..++.++++ ..|+++..+. ...-.-.+.+|+..| ++|++=.
T Consensus 97 ~~d~~ell~~~~vD~V~I~tp--~~~H~~~~~~al~aG~~~~~~khVl~EK 145 (479)
T 2nvw_A 97 FDSLESFAQYKDIDMIVVSVK--VPEHYEVVKNILEHSSQNLNLRYLYVEW 145 (479)
T ss_dssp ESCHHHHHHCTTCSEEEECSC--HHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred eCCHHHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHCCCCcCCceeEEEeC
Confidence 257788886 5898888776 444445567899999 9998743
No 407
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=32.08 E-value=32 Score=30.49 Aligned_cols=36 Identities=11% Similarity=-0.072 Sum_probs=27.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.+|++++...+.|| --.-.++.|...|++|+|+...
T Consensus 133 ~~vlVlcG~GNNGG---DGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGA---QGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHH---HHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHH---HHHHHHHHHHHCCCcEEEEEec
Confidence 37998887555555 3355688899999999998754
No 408
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=32.06 E-value=35 Score=31.10 Aligned_cols=44 Identities=9% Similarity=-0.028 Sum_probs=30.9
Q ss_pred cccccEEEEEeccCCC-CChH-HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 71 FMKSKLVLLVSHELSL-SGGP-LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~-gG~~-~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
||++|||+++....+. --.. .....++++|.+.||+|..+....
T Consensus 1 ~~~~~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~~ 46 (372)
T 3tqt_A 1 MAEKLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDH 46 (372)
T ss_dssp -CCSEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCCCCEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEECC
Confidence 4667899999854333 1122 667778899999999999888443
No 409
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=32.01 E-value=39 Score=25.04 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=27.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCC--CEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~ 113 (396)
+|++++...............++....++| ++|.++...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 577777755333322245788888888999 699999843
No 410
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=31.90 E-value=71 Score=26.68 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=27.9
Q ss_pred cccEEEEEeccC-CCCChH-HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 73 KSKLVLLVSHEL-SLSGGP-LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 73 ~~~kIl~v~~~~-~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
.|+||+++.... ...|.+ .-+......|+..|++|++++..+
T Consensus 5 ~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp -CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 346899887532 123443 555556678888999999999554
No 411
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=31.55 E-value=39 Score=31.70 Aligned_cols=35 Identities=14% Similarity=0.180 Sum_probs=25.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+++|||++. +++ ....+++++++.|++|.++...
T Consensus 4 ~~~k~ILI~g------~g~-~~~~i~~a~~~~G~~vv~v~~~ 38 (461)
T 2dzd_A 4 RRIRKVLVAN------RGE-IAIRVFRACTELGIRTVAIYSK 38 (461)
T ss_dssp CCCSEEEECS------CHH-HHHHHHHHHHHHTCEEEEEECG
T ss_pred CcCcEEEEEC------CcH-HHHHHHHHHHHcCCEEEEEECC
Confidence 4457888864 333 4667899999999999988743
No 412
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=31.41 E-value=1.8e+02 Score=24.70 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 7 k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 7 KTLFIT-----GASRGIGLAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEecc
Confidence 556666 333446667889999999999888743
No 413
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=31.39 E-value=1e+02 Score=24.46 Aligned_cols=87 Identities=11% Similarity=-0.062 Sum_probs=41.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHH-hCC--CEEEEEeccCC-CCc-hhhhhhhhhhhhhcceEEEEcCchhhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLR-GVG--TKVNWITIQKP-SEE-DEVIYSLEHKMWDRGVQVISAKGQETI 145 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~-~~G--~~V~vi~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
..+|+|||||+....- -......+.+.+. ++| .++.|.+.... ... .+....-...+...|+++-... .+.+
T Consensus 15 ~~~M~kVLFVCtGNiC--RSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~-ar~l 91 (173)
T 4etm_A 15 RGSMISVLFVCLGNIC--RSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGML-ARQV 91 (173)
T ss_dssp CSSCEEEEEEESSSSS--HHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCC-CCBC
T ss_pred CCCccEEEEEeCCcch--hhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCc-cccC
Confidence 3455799999964322 1244445555443 344 34666663221 110 1111112334455676652111 1111
Q ss_pred --hhccCCcEEEEcCch
Q 016053 146 --NTALKADLIVLNTAV 160 (396)
Q Consensus 146 --~~~~~~DiV~~~~~~ 160 (396)
....++|+|++-+..
T Consensus 92 ~~~d~~~~DlIl~Md~~ 108 (173)
T 4etm_A 92 SEQDLDDFDYIIAMDAE 108 (173)
T ss_dssp CHHHHHHCSEEEESSHH
T ss_pred CHhhcCCCCEEEEeCch
Confidence 123568999987643
No 414
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=31.38 E-value=66 Score=25.52 Aligned_cols=82 Identities=11% Similarity=-0.080 Sum_probs=39.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh--hccCC
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TALKA 151 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (396)
+++||||+....- -......+++.+.. +++|.-..... ....+........+.+.|+++-.. ..+.+. ...++
T Consensus 22 m~~VLFVCtgN~c--RSpmAEal~r~~~~-~~~v~SAGt~~-~~g~~~~p~a~~vl~e~Gid~s~~-~sr~l~~~~~~~~ 96 (167)
T 2fek_A 22 FNNILVVCVGNIC--RSPTAERLLQRYHP-ELKVESAGLGA-LVGKGADPTAISVAAEHQLSLEGH-CARQISRRLCRNY 96 (167)
T ss_dssp CCEEEEEESSSSS--HHHHHHHHHHHHCT-TCEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTC-CCCBCCHHHHHHS
T ss_pred cCeEEEEcCCcHH--HHHHHHHHHHHhcC-CeEEEeeecCC-CCCCCCCHHHHHHHHHcCCCccCC-cCccCCHHHhccC
Confidence 4599999964322 23566666666553 45444333211 111112222333455667765211 112221 23468
Q ss_pred cEEEEcCch
Q 016053 152 DLIVLNTAV 160 (396)
Q Consensus 152 DiV~~~~~~ 160 (396)
|+|++-+..
T Consensus 97 DlIitM~~~ 105 (167)
T 2fek_A 97 DLILTMEKR 105 (167)
T ss_dssp SEEEESCHH
T ss_pred CEEEEcCHH
Confidence 999987643
No 415
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=31.36 E-value=1.5e+02 Score=26.57 Aligned_cols=94 Identities=10% Similarity=-0.034 Sum_probs=45.5
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHH----h-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLR----G-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ 142 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~----~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (396)
....|++-||.+|.. |...+.-..-.+.+. . .+.++.-+++..+.. ........++... ....
T Consensus 19 ~~~~MkkirvgiIG~----G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~-------a~~~a~~~g~~~~-y~d~ 86 (393)
T 4fb5_A 19 YFQSMKPLGIGLIGT----GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGL-------AEARAGEFGFEKA-TADW 86 (393)
T ss_dssp -----CCCEEEEECC----SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TT-------HHHHHHHHTCSEE-ESCH
T ss_pred cccCCCCccEEEEcC----CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHH-------HHHHHHHhCCCee-cCCH
Confidence 445677779999973 322222111111121 1 367888887554321 1112222343211 2334
Q ss_pred hhhhhccCCcEEEEcCchhh--HHHHHHHhcCC
Q 016053 143 ETINTALKADLIVLNTAVAG--KWLDAVLKEDV 173 (396)
Q Consensus 143 ~~~~~~~~~DiV~~~~~~~~--~~~~~~~~~~~ 173 (396)
..+....++|+|++.+|... .+...+.+.+.
T Consensus 87 ~ell~~~~iDaV~IatP~~~H~~~a~~al~aGk 119 (393)
T 4fb5_A 87 RALIADPEVDVVSVTTPNQFHAEMAIAALEAGK 119 (393)
T ss_dssp HHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTC
T ss_pred HHHhcCCCCcEEEECCChHHHHHHHHHHHhcCC
Confidence 56666788999999987543 34445556663
No 416
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=31.33 E-value=1.3e+02 Score=26.19 Aligned_cols=81 Identities=14% Similarity=0.029 Sum_probs=39.0
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhcc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (396)
.|+++||++|.. |. .-..+++.|++ .++++..++...+.. ... .|+.+ .....+....
T Consensus 6 ~M~~irv~IIG~----G~---iG~~~~~~l~~~~~~elvav~d~~~~~-------~~~----~g~~~---~~~~~l~~~~ 64 (304)
T 3bio_A 6 DDKKIRAAIVGY----GN---IGRYALQALREAPDFEIAGIVRRNPAE-------VPF----ELQPF---RVVSDIEQLE 64 (304)
T ss_dssp --CCEEEEEECC----SH---HHHHHHHHHHHCTTEEEEEEECC------------------CCTTS---CEESSGGGSS
T ss_pred cCCCCEEEEECC----hH---HHHHHHHHHhcCCCCEEEEEEcCCHHH-------HHH----cCCCc---CCHHHHHhCC
Confidence 366789999873 22 22344666665 578888666443321 110 12211 1111222336
Q ss_pred CCcEEEEcCchhhH--HHHHHHhcC
Q 016053 150 KADLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 150 ~~DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
++|+|+..++.... ....+.+.+
T Consensus 65 ~~DvViiatp~~~h~~~~~~al~aG 89 (304)
T 3bio_A 65 SVDVALVCSPSREVERTALEILKKG 89 (304)
T ss_dssp SCCEEEECSCHHHHHHHHHHHHTTT
T ss_pred CCCEEEECCCchhhHHHHHHHHHcC
Confidence 89999988864433 333344444
No 417
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=31.33 E-value=61 Score=25.34 Aligned_cols=37 Identities=24% Similarity=0.227 Sum_probs=24.7
Q ss_pred HHHHHHcCEEEecCCCCCCCccHHHHHHHhcCCCEEE
Q 016053 351 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLV 387 (396)
Q Consensus 351 ~~~~~~aDv~v~pS~~~~E~fg~~~lEAma~G~PVI~ 387 (396)
.+.+..||++|.--..-..|-+.-+-=|.+.|+||++
T Consensus 63 ~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~ 99 (152)
T 4fyk_A 63 LNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILC 99 (152)
T ss_dssp HHHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 4678999998864320022333445568899999999
No 418
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=31.29 E-value=76 Score=25.98 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecc
Q 016053 90 PLLLMELAFLLRGV-GTKVNWITIQ 113 (396)
Q Consensus 90 ~~~~~~l~~~L~~~-G~~V~vi~~~ 113 (396)
.....++++.|++. |++|.++...
T Consensus 13 a~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 13 APLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp HHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred HHHHHHHHHHHHhccCCEEEEEECc
Confidence 36789999999998 9999998854
No 419
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=31.22 E-value=2.1e+02 Score=24.40 Aligned_cols=81 Identities=10% Similarity=0.061 Sum_probs=54.1
Q ss_pred EEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHhcCCCCcEEEecC----
Q 016053 272 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQKKIQDRVHFVNK---- 346 (396)
Q Consensus 272 ~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~~~l~~~V~~~g~---- 346 (396)
.|+|+|-+.-.-|...+...++++++ ++ | ++|+-.+.. +...+.+..-+...++|.. +.-+|-
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~-------~~-d--~vi~ngen~~~G~g~~~~~~~~l~~~G~D--~~T~GNHefD 69 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRD-------RY-D--LVIANGENAARGKGLDRRSYRLLREAGVD--LVSLGNHAWD 69 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGG-------GC-S--EEEEECTTTTTTSSCCHHHHHHHHHHTCC--EEECCTTTTS
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHh-------hC-C--EEEEeCCCccCCCCcCHHHHHHHHhCCCC--EEEeccEeeE
Confidence 58899998888888877777777654 33 4 555554432 1122445566667777764 556663
Q ss_pred cCCHHHHHHHcCEEEecCC
Q 016053 347 TLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 347 ~~~~~~~~~~aDv~v~pS~ 365 (396)
..++.+++...+ .+.|..
T Consensus 70 ~~~l~~~l~~~~-~vrpaN 87 (252)
T 2z06_A 70 HKEVYALLESEP-VVRPLN 87 (252)
T ss_dssp CTTHHHHHHHSS-EECCTT
T ss_pred CchHHHHhccCC-ceEeec
Confidence 257999999999 888877
No 420
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=31.22 E-value=2.8e+02 Score=24.61 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=54.1
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCC-ccchHHHHHHHHHHhc
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQK 335 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~-~~~~~~~~l~~~~~~~ 335 (396)
---+++.+|- -+...|.|+|-. ...=..-++.++.. -++++.++|+..- .+++..+.+++.+++.
T Consensus 155 l~Ti~e~~g~-l~gl~va~vGD~-~~rva~Sl~~~~~~------------~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~ 220 (325)
T 1vlv_A 155 LMTIEENFGR-LKGVKVVFMGDT-RNNVATSLMIACAK------------MGMNFVACGPEELKPRSDVFKRCQEIVKET 220 (325)
T ss_dssp HHHHHHHHSC-STTCEEEEESCT-TSHHHHHHHHHHHH------------TTCEEEEESCGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-cCCcEEEEECCC-CcCcHHHHHHHHHH------------CCCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 3456777773 356789999983 22222333444433 2789999997431 1122334455666676
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecCC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS~ 365 (396)
|. .+.+. +++.+.+..+||+.....
T Consensus 221 G~--~v~~~---~d~~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 221 DG--SVSFT---SNLEEALAGADVVYTDVW 245 (325)
T ss_dssp CC--EEEEE---SCHHHHHTTCSEEEECCC
T ss_pred CC--eEEEE---cCHHHHHccCCEEEeccc
Confidence 62 34443 678899999999887543
No 421
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=31.21 E-value=53 Score=29.67 Aligned_cols=30 Identities=30% Similarity=0.203 Sum_probs=22.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|||++|. +| ..=..+|..|++.|++|+|+=
T Consensus 2 m~V~IVG-----aG--paGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIG-----AG--IGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEC-----cC--HHHHHHHHHHHhCCCCEEEEe
Confidence 5899887 33 233456778899999999984
No 422
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=31.20 E-value=2.9e+02 Score=25.45 Aligned_cols=91 Identities=8% Similarity=-0.010 Sum_probs=46.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcc---eEEEE--cCchhh
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVIS--AKGQET 144 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~ 144 (396)
+|+++||.+|.. |. .-...+..|.+ .|+++..++...+. ....+.+.+...| ...+. ......
T Consensus 17 ~~~~~rvgiIG~----G~---~g~~h~~~l~~~~~~~lvav~d~~~~----~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ 85 (444)
T 2ixa_A 17 NPKKVRIAFIAV----GL---RGQTHVENMARRDDVEIVAFADPDPY----MVGRAQEILKKNGKKPAKVFGNGNDDYKN 85 (444)
T ss_dssp --CCEEEEEECC----SH---HHHHHHHHHHTCTTEEEEEEECSCHH----HHHHHHHHHHHTTCCCCEEECSSTTTHHH
T ss_pred CCCCceEEEEec----CH---HHHHHHHHHHhCCCcEEEEEEeCCHH----HHHHHHHHHHhcCCCCCceeccCCCCHHH
Confidence 466779999862 22 22234556665 47888877754331 1111111111223 33332 113455
Q ss_pred hhhccCCcEEEEcCchhh--HHHHHHHhcC
Q 016053 145 INTALKADLIVLNTAVAG--KWLDAVLKED 172 (396)
Q Consensus 145 ~~~~~~~DiV~~~~~~~~--~~~~~~~~~~ 172 (396)
+....++|+|++.++... -+...+.+.+
T Consensus 86 ll~~~~vD~V~i~tp~~~h~~~~~~al~aG 115 (444)
T 2ixa_A 86 MLKDKNIDAVFVSSPWEWHHEHGVAAMKAG 115 (444)
T ss_dssp HTTCTTCCEEEECCCGGGHHHHHHHHHHTT
T ss_pred HhcCCCCCEEEEcCCcHHHHHHHHHHHHCC
Confidence 555668999999886443 2444455555
No 423
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=31.20 E-value=57 Score=27.43 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=22.6
Q ss_pred CcccccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 68 ~~~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
+...|++++|+++... +.....+...|.+.|+.|..+.
T Consensus 31 ~m~~m~~~~ILivdd~------~~~~~~l~~~L~~~g~~v~~~~ 68 (249)
T 3q9s_A 31 QMGRMNEQRILVIEDD------HDIANVLRMDLTDAGYVVDHAD 68 (249)
T ss_dssp ------CCEEEEECSC------HHHHHHHHHHHHTTTCEEEEES
T ss_pred ccCCCCCCEEEEEECC------HHHHHHHHHHHHHCCCEEEEeC
Confidence 3445667799998742 3455566778888899776543
No 424
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=31.07 E-value=1.2e+02 Score=25.42 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 8 k~~lVT-----Gas~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVT-----GASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 566666 344446677899999999999888643
No 425
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=31.05 E-value=1.5e+02 Score=23.02 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=22.8
Q ss_pred HHcC-EEEecCCCCCCCccHHHHHHH----hcCCCEEE
Q 016053 355 AAID-VLVQNSQAWGECFGRITIEAM----AFQLPVLV 387 (396)
Q Consensus 355 ~~aD-v~v~pS~~~~E~fg~~~lEAm----a~G~PVI~ 387 (396)
...| +++.|-- +-..+..+..|+ +.++|+|=
T Consensus 69 ~~~dgiiINpgA--~THtSvAlrDAl~~l~~~~~P~VE 104 (151)
T 3u80_A 69 DEKTPVVMNPAA--FTHYSYALADAAHMVIDENLPLME 104 (151)
T ss_dssp HHTCCEEEECTT--CCSCCHHHHHHHHHHHHTTCCEEE
T ss_pred hcCcEEEECcch--hhhhhHHHHHHHHHHhhcCCCEEE
Confidence 4455 5667777 778899999994 45999873
No 426
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=31.00 E-value=86 Score=27.90 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=44.9
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
+..+|+++.. | .+....++.++...|.+|+++++.+-...........+.....|..+........ .-.+.|
T Consensus 154 ~gl~va~vGD-----~-~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~e--av~~aD 225 (321)
T 1oth_A 154 KGLTLSWIGD-----G-NNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLE--AAHGGN 225 (321)
T ss_dssp TTCEEEEESC-----S-SHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHH--HHTTCS
T ss_pred CCcEEEEECC-----c-hhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHH--HhccCC
Confidence 3468998874 2 3789999999999999999999765432222221122222233433322222211 125678
Q ss_pred EEEEcC
Q 016053 153 LIVLNT 158 (396)
Q Consensus 153 iV~~~~ 158 (396)
+|+.-.
T Consensus 226 vvy~d~ 231 (321)
T 1oth_A 226 VLITDT 231 (321)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888843
No 427
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=30.99 E-value=38 Score=30.57 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=24.1
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+||||.+|.. | ..=..++..|.+.||+|+++..
T Consensus 13 m~M~kI~iIG~-----G--~mG~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGS-----G--AFGTALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp CCEEEEEEECC-----S--HHHHHHHHHHTTTEEEEEEECS
T ss_pred hccCeEEEECC-----C--HHHHHHHHHHHhCCCEEEEEEC
Confidence 43448998873 3 3445678888889999998853
No 428
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=30.98 E-value=2.1e+02 Score=26.62 Aligned_cols=80 Identities=21% Similarity=0.206 Sum_probs=46.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc----h----hhhh
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----Q----ETIN 146 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~ 146 (396)
.|+++. ....|=.+.+.+|+.+|.++ |+.|.++..+...... ...+.......++++++... . ..+.
T Consensus 102 vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~~a--~~ql~~~~~~~~l~v~~~~~~~dp~~i~~~~l~ 177 (433)
T 2xxa_A 102 VVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAA--IKQLETLAEQVGVDFFPSDVGQKPVDIVNAALK 177 (433)
T ss_dssp EEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSSTTH--HHHHHHHHHHHTCEECCCCSSSCHHHHHHHHHH
T ss_pred EEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCccH--HHHHHhhcccCCeeEEeCCCCCCHHHHHHHHHH
Confidence 455543 33344458999999999999 9999999855322111 11122222345677765432 1 1122
Q ss_pred h--ccCCcEEEEcCc
Q 016053 147 T--ALKADLIVLNTA 159 (396)
Q Consensus 147 ~--~~~~DiV~~~~~ 159 (396)
. ..++|+|++.++
T Consensus 178 ~~~~~~~D~VIIDTp 192 (433)
T 2xxa_A 178 EAKLKFYDVLLVDTA 192 (433)
T ss_dssp HHHHTTCSEEEEECC
T ss_pred HHHhCCCCEEEEECC
Confidence 1 258999999885
No 429
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=30.88 E-value=68 Score=24.26 Aligned_cols=76 Identities=17% Similarity=0.107 Sum_probs=38.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhh--ccCCc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT--ALKAD 152 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~D 152 (396)
++||||+.... .-......+++.+...+ +.+.+..... .+........+...|+++-.. ..+.+.. ...+|
T Consensus 5 ~~VLFVC~gN~--cRSpmAEa~~~~~~~~~--~~v~SAGt~g--~~~~~~a~~~l~e~Gid~s~~-~sr~l~~~~~~~~D 77 (134)
T 2l17_A 5 KKVMFVCKRNS--CRSQMAEGFAKTLGAGK--IAVTSCGLES--SRVHPTAIAMMEEVGIDISGQ-TSDPIENFNADDYD 77 (134)
T ss_dssp EEEEEECCSST--HHHHHHHHHHHHHSBTT--EEEEEECCTT--SSCCHHHHHHHHTTTCCCSSC-CCCCGGGCCGGGCS
T ss_pred CEEEEEeCCch--HHHHHHHHHHHHHcCCC--EEEEcccCCC--CCCCHHHHHHHHHcCCCcccC-ccccCChHHhccCC
Confidence 58999996332 22255666666665543 4455522211 111112334556667765211 1222322 35689
Q ss_pred EEEEc
Q 016053 153 LIVLN 157 (396)
Q Consensus 153 iV~~~ 157 (396)
+|++-
T Consensus 78 lIi~m 82 (134)
T 2l17_A 78 VVISL 82 (134)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99886
No 430
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=30.87 E-value=1.2e+02 Score=26.79 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=48.4
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHH--cCEEEecCCCCCCCccHHHHHHHhcCCC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLP 384 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~--aDv~v~pS~~~~E~fg~~~lEAma~G~P 384 (396)
++++++-+.+.... +..+.+.+..+++++..++ .++..++++. .|+++..+. ...-.-.+.+|+..|++
T Consensus 23 ~~~~lvav~d~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~~vD~V~I~tp--~~~H~~~~~~al~aGkh 93 (337)
T 3ip3_A 23 EECSITGIAPGVPE--EDLSKLEKAISEMNIKPKK-----YNNWWEMLEKEKPDILVINTV--FSLNGKILLEALERKIH 93 (337)
T ss_dssp TTEEEEEEECSSTT--CCCHHHHHHHHTTTCCCEE-----CSSHHHHHHHHCCSEEEECSS--HHHHHHHHHHHHHTTCE
T ss_pred CCcEEEEEecCCch--hhHHHHHHHHHHcCCCCcc-----cCCHHHHhcCCCCCEEEEeCC--cchHHHHHHHHHHCCCc
Confidence 78888877654311 1234556666666653221 3678888886 788887766 44444557899999999
Q ss_pred EEEcC
Q 016053 385 VLVLS 389 (396)
Q Consensus 385 VI~t~ 389 (396)
|++=.
T Consensus 94 Vl~EK 98 (337)
T 3ip3_A 94 AFVEK 98 (337)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 98744
No 431
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.86 E-value=72 Score=27.18 Aligned_cols=33 Identities=27% Similarity=0.196 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.+....
T Consensus 19 k~~lVT-----Gas~gIG~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 19 KVALVT-----GSGRGIGAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp CEEEES-----CTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 455566 343445677889999999999987643
No 432
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=30.85 E-value=85 Score=33.74 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=24.7
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|||++. +| .....+++++++.|+++.++...
T Consensus 31 ~kkILI~g-----rG--eia~~iiraar~lGi~vVaV~s~ 63 (1236)
T 3va7_A 31 FETVLIAN-----RG--EIAVRIMKTLKRMGIKSVAVYSD 63 (1236)
T ss_dssp CSEEEECC-----CH--HHHHHHHHHHHHHTCEEEEEECS
T ss_pred CCEEEEEc-----CC--HHHHHHHHHHHHCCCEEEEEEcC
Confidence 45788765 23 34678899999999999888643
No 433
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=30.81 E-value=1e+02 Score=25.36 Aligned_cols=40 Identities=23% Similarity=0.155 Sum_probs=27.3
Q ss_pred cEEEEEeccCCC------CChH-HHHHHHHHHHHhCCCEEEEEeccC
Q 016053 75 KLVLLVSHELSL------SGGP-LLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 75 ~kIl~v~~~~~~------gG~~-~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
+||+++...... .|.+ .-+....+.|+..|++|++++..+
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 578888753221 3333 556667778888999999999654
No 434
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=30.70 E-value=1.1e+02 Score=26.79 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=29.6
Q ss_pred CCHHHHHH--HcCEEEecCCCCCCCccHHHHHHHhcCCC-EEE
Q 016053 348 LTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP-VLV 387 (396)
Q Consensus 348 ~~~~~~~~--~aDv~v~pS~~~~E~fg~~~lEAma~G~P-VI~ 387 (396)
.++.++.. ..|+.+.-.. .+...-.+.|+...|++ +|.
T Consensus 60 ~sl~el~~~~~~Dv~ii~vp--~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 60 DTVKEAVKETDANASVIFVP--APFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp SSHHHHHHHHCCCEEEECCC--HHHHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhhcCCCCEEEEccC--HHHHHHHHHHHHHCCCCEEEE
Confidence 56777777 7899887777 67777788899999999 443
No 435
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=30.55 E-value=67 Score=27.75 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=24.9
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|+.++|.+|. .| ..=..++..|.+.|++|+++.
T Consensus 2 m~~~kV~VIG-----aG--~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 2 TGITNVTVLG-----TG--VLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CSCCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEEC-----CC--HHHHHHHHHHHhCCCeEEEEe
Confidence 4557899885 23 455678888899999998875
No 436
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=30.54 E-value=58 Score=27.64 Aligned_cols=38 Identities=11% Similarity=-0.006 Sum_probs=22.6
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++++||+|.. ++.-.+...--.+..+.++|++|.+++
T Consensus 1 ~~~~~vL~v~a--HPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 1 MSGLHILAFGA--HADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp -CCCSEEEEES--STTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccEEEEEe--CCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 45567888883 333323333333445566899999888
No 437
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=30.44 E-value=2.5e+02 Score=24.46 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=30.5
Q ss_pred CCHHHHHH--H-cCEEEecCCCCCCCccHHHHHHHhcCCC-EEE
Q 016053 348 LTVAPYLA--A-IDVLVQNSQAWGECFGRITIEAMAFQLP-VLV 387 (396)
Q Consensus 348 ~~~~~~~~--~-aDv~v~pS~~~~E~fg~~~lEAma~G~P-VI~ 387 (396)
+++.++.. . .|+.+.-.. .+...-.+.|+...|++ +|.
T Consensus 60 ~sl~el~~~~~~~DvaIi~vp--~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 60 DSVKEALAEHPEINTSIVFVP--APFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp SSHHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhhcCCCCCEEEEecC--HHHHHHHHHHHHHCCCCEEEE
Confidence 56777776 4 899988777 78888889999999999 554
No 438
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=30.43 E-value=1.7e+02 Score=25.63 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=42.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhC--CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch---------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--------- 142 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 142 (396)
++||+++.+ |...-+..|..+.+.. ..+|..+.+..+. ........|++++..+..
T Consensus 95 ~~ri~vl~S-----g~g~~l~~ll~~~~~g~l~~~i~~Visn~~~--------~~~~A~~~gIp~~~~~~~~~~r~~~~~ 161 (292)
T 3lou_A 95 RPKVLIMVS-----KLEHCLADLLFRWKMGELKMDIVGIVSNHPD--------FAPLAAQHGLPFRHFPITADTKAQQEA 161 (292)
T ss_dssp CCEEEEEEC-----SCCHHHHHHHHHHHHTSSCCEEEEEEESSST--------THHHHHHTTCCEEECCCCSSCHHHHHH
T ss_pred CCEEEEEEc-----CCCcCHHHHHHHHHcCCCCcEEEEEEeCcHH--------HHHHHHHcCCCEEEeCCCcCCHHHHHH
Confidence 457777663 2224666676665553 4677766655443 233456678888764321
Q ss_pred --hhhhhccCCcEEEEcC
Q 016053 143 --ETINTALKADLIVLNT 158 (396)
Q Consensus 143 --~~~~~~~~~DiV~~~~ 158 (396)
....+..++|+|++-.
T Consensus 162 ~~~~~l~~~~~Dlivla~ 179 (292)
T 3lou_A 162 QWLDVFETSGAELVILAR 179 (292)
T ss_dssp HHHHHHHHHTCSEEEESS
T ss_pred HHHHHHHHhCCCEEEecC
Confidence 1223457999998876
No 439
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=30.17 E-value=72 Score=26.82 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=22.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++.
T Consensus 13 k~vlVT-----Gas~gIG~aia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVT-----GASDGIGREAAMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEE-----STTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEe-----CCCChHHHHHHHHHHHCCCEEEEEe
Confidence 555666 3333455678899999999988876
No 440
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=30.15 E-value=1.5e+02 Score=23.51 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=21.7
Q ss_pred HHcC-EEEecCCCCCCCccHHHHHHH-hcCCCEEE
Q 016053 355 AAID-VLVQNSQAWGECFGRITIEAM-AFQLPVLV 387 (396)
Q Consensus 355 ~~aD-v~v~pS~~~~E~fg~~~lEAm-a~G~PVI~ 387 (396)
..+| +++.|-- +-..+..+..|+ +.++|+|=
T Consensus 93 ~~~dgIIINPgA--yTHtSvAlrDAL~~v~~P~VE 125 (172)
T 3n8k_A 93 DAAEPVILNAGG--LTHTSVALRDACAELSAPLIE 125 (172)
T ss_dssp HHTCCEEEECGG--GGGTCHHHHHHHTTCCSCEEE
T ss_pred hcCcEEEECcch--hhhhhHHHHHHHHhCCCCEEE
Confidence 3455 5666766 677888899987 56788773
No 441
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=30.15 E-value=34 Score=29.95 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=23.6
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|++|+|++.. |....=..+++.|.++|++|.++.
T Consensus 1 M~~~~ilVtG------atG~iG~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAG------HRGMVGSAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp -CCEEEEEET------TTSHHHHHHHHHHTTCTTEEEECC
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHhCCCeEEEEe
Confidence 4456776543 334566778888999999988765
No 442
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=30.14 E-value=1.1e+02 Score=26.74 Aligned_cols=68 Identities=10% Similarity=0.207 Sum_probs=43.2
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHH-HHcCEEEecCCCCCCCccHHHHHHHhcCCCE
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYL-AAIDVLVQNSQAWGECFGRITIEAMAFQLPV 385 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~-~~aDv~v~pS~~~~E~fg~~~lEAma~G~PV 385 (396)
++++++ +-+. ..+..++.+++++.+. .+... .+.+ ..+|+++..+. .....-.+.+|+..|++|
T Consensus 26 ~~~~l~-v~d~------~~~~~~~~a~~~g~~~--~~~~~----~~~l~~~~D~V~i~tp--~~~h~~~~~~al~~Gk~V 90 (323)
T 1xea_A 26 PDIELV-LCTR------NPKVLGTLATRYRVSA--TCTDY----RDVLQYGVDAVMIHAA--TDVHSTLAAFFLHLGIPT 90 (323)
T ss_dssp TTEEEE-EECS------CHHHHHHHHHHTTCCC--CCSST----TGGGGGCCSEEEECSC--GGGHHHHHHHHHHTTCCE
T ss_pred CCceEE-EEeC------CHHHHHHHHHHcCCCc--cccCH----HHHhhcCCCEEEEECC--chhHHHHHHHHHHCCCeE
Confidence 678888 4443 3455667777776541 01111 1223 57899988777 555556677899999999
Q ss_pred EEcC
Q 016053 386 LVLS 389 (396)
Q Consensus 386 I~t~ 389 (396)
++-.
T Consensus 91 ~~EK 94 (323)
T 1xea_A 91 FVDK 94 (323)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8754
No 443
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=30.04 E-value=65 Score=27.63 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=26.0
Q ss_pred cEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEeccCC
Q 016053 75 KLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKP 115 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~ 115 (396)
||||+.+.. |.. .-+..|+++|++.| +|+|+.+...
T Consensus 2 M~ILlTNDD----Gi~apGi~aL~~~L~~~g-~V~VVAP~~~ 38 (254)
T 2v4n_A 2 MRILLSNDD----GVHAPGIQTLAKALREFA-DVQVVAPDRN 38 (254)
T ss_dssp CEEEEECSS----CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CeEEEEcCC----CCCCHHHHHHHHHHHhCC-cEEEEeeCCC
Confidence 588877653 332 66788888888876 9999996543
No 444
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.91 E-value=36 Score=29.81 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=38.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCc--hhhhhh-ccCC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--QETINT-ALKA 151 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 151 (396)
++|++..... ..=..+++.|.+.|++|.+++..... .... + ..+...++.++.... ...+.. ..++
T Consensus 12 ~~ilVtGatG------~iG~~l~~~L~~~g~~V~~l~R~~~~-~~~~---~-~~l~~~~v~~v~~Dl~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 12 SKILIFGGTG------YIGNHMVKGSLKLGHPTYVFTRPNSS-KTTL---L-DEFQSLGAIIVKGELDEHEKLVELMKKV 80 (318)
T ss_dssp CCEEEETTTS------TTHHHHHHHHHHTTCCEEEEECTTCS-CHHH---H-HHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CeEEEECCCc------hHHHHHHHHHHHCCCcEEEEECCCCc-hhhH---H-HHhhcCCCEEEEecCCCHHHHHHHHcCC
Confidence 4676554222 33456677888899999988744321 1110 1 112234566654432 222222 2468
Q ss_pred cEEEEcCc
Q 016053 152 DLIVLNTA 159 (396)
Q Consensus 152 DiV~~~~~ 159 (396)
|+|+....
T Consensus 81 d~vi~~a~ 88 (318)
T 2r6j_A 81 DVVISALA 88 (318)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99876653
No 445
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.82 E-value=1.3e+02 Score=20.48 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=35.9
Q ss_pred CCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHH
Q 016053 283 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVA 351 (396)
Q Consensus 283 Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~ 351 (396)
.|....+++++. ...+|+|+-.+.+. .....+..++++.+++ +.+.+...++-
T Consensus 14 ~G~~~v~kai~~------------gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip--~~~v~sk~eLG 66 (82)
T 3v7e_A 14 IGTKQTVKALKR------------GSVKEVVVAKDADP--ILTSSVVSLAEDQGIS--VSMVESMKKLG 66 (82)
T ss_dssp ESHHHHHHHHTT------------TCEEEEEEETTSCH--HHHHHHHHHHHHHTCC--EEEESCHHHHH
T ss_pred EcHHHHHHHHHc------------CCeeEEEEeCCCCH--HHHHHHHHHHHHcCCC--EEEECCHHHHH
Confidence 356666666653 57899888876533 4677888889988886 56655444443
No 446
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=29.76 E-value=66 Score=25.34 Aligned_cols=35 Identities=23% Similarity=0.154 Sum_probs=22.9
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
.|++++||++... +.....+...|.+.||+|..+.
T Consensus 4 ~m~~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~ 38 (184)
T 3rqi_A 4 SMSDKNFLVIDDN------EVFAGTLARGLERRGYAVRQAH 38 (184)
T ss_dssp ---CCEEEEECSC------HHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCeEEEEcCC------HHHHHHHHHHHHHCCCEEEEeC
Confidence 4666799998742 3455666777888899885554
No 447
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=29.72 E-value=2.5e+02 Score=23.55 Aligned_cols=212 Identities=10% Similarity=0.017 Sum_probs=101.5
Q ss_pred ccccEEEEEec-cCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 72 MKSKLVLLVSH-ELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 72 m~~~kIl~v~~-~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
.+.++|.++.+ .....-.......+.+++.+.|+++.++........ ..+. . ......+
T Consensus 9 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~------~~~~-------------~-~~l~~~~ 68 (289)
T 3g85_A 9 QSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTDC------LHLE-------------K-GISKENS 68 (289)
T ss_dssp --CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEEEEECTTC------GGGC-------------G-GGSTTTC
T ss_pred CCCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEecCCCchh------HHHH-------------H-HHHhccC
Confidence 34467998887 333333346777788888899999988763322100 0000 0 1223457
Q ss_pred CcEEEEcCchhhH-HHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhcccC
Q 016053 151 ADLIVLNTAVAGK-WLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM 229 (396)
Q Consensus 151 ~DiV~~~~~~~~~-~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~ 229 (396)
+|.|++....... .+......++| ++...... . ....+..+.........+.+.+ .| .
T Consensus 69 vdgiIi~~~~~~~~~~~~~~~~~iP-----vV~~~~~~-----~--------~~~~V~~D~~~~~~~a~~~L~~-~G--~ 127 (289)
T 3g85_A 69 FDAAIIANISNYDLEYLNKASLTLP-----IILFNRLS-----N--------KYSSVNVDNYKMGEKASLLFAK-KR--Y 127 (289)
T ss_dssp CSEEEESSCCHHHHHHHHHCCCSSC-----EEEESCCC-----S--------SSEEEEECHHHHHHHHHHHHHH-TT--C
T ss_pred CCEEEEecCCcccHHHHHhccCCCC-----EEEECCCC-----C--------CCCEEEeCHHHHHHHHHHHHHH-cC--C
Confidence 8988887643221 22222234444 44322211 1 1222333333333444444442 23 3
Q ss_pred CCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCE
Q 016053 230 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 309 (396)
Q Consensus 230 ~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~ 309 (396)
.++.++....+..... .+..--.+.-++.|++.+...+. .+.. ..+...+++.++.+ ++++.
T Consensus 128 ~~i~~i~~~~~~~~~~------~R~~gf~~~l~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~l~-------~~~~~ 189 (289)
T 3g85_A 128 KSAAAILTESLNDAMD------NRNKGFIETCHKNGIKISENHII-AAEN----SIHGGVDAAKKLMK-------LKNTP 189 (289)
T ss_dssp CBCEEEECCCSSHHHH------HHHHHHHHHHHHTTCBCCGGGEE-ECCS----SHHHHHHHHHHHTT-------SSSCC
T ss_pred CEEEEEeCCcccccHH------HHHHHHHHHHHHcCCCCChhhee-ccCC----CHHHHHHHHHHHHc-------CCCCC
Confidence 4576665432211110 11111123334456644332232 3332 33444455555432 23567
Q ss_pred EEEEEecCCCccchHHHHHHHHHHhcCCC--CcEEEecCc
Q 016053 310 HAVIIGSDMNAQTKFESELRNYVMQKKIQ--DRVHFVNKT 347 (396)
Q Consensus 310 ~l~ivG~g~~~~~~~~~~l~~~~~~~~l~--~~V~~~g~~ 347 (396)
..+++.++. ....+.+.+++.|+. +.|.++|+-
T Consensus 190 ~ai~~~~d~-----~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 190 KALFCNSDS-----IALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SEEEESSHH-----HHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred cEEEEcCCH-----HHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 777777642 334566677777764 788888875
No 448
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=29.67 E-value=46 Score=28.96 Aligned_cols=39 Identities=5% Similarity=0.019 Sum_probs=26.8
Q ss_pred cEEEEEeccCCC-CChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~-gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|||+++...... .-.......+++++++.||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 589999854321 000134567999999999999998743
No 449
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=29.66 E-value=2.6e+02 Score=24.40 Aligned_cols=84 Identities=8% Similarity=0.007 Sum_probs=44.6
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhh-------
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN------- 146 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 146 (396)
|+||.+|.. || ......++++++.|.++..++...+.. .. .... ..+.+.+. ....+.
T Consensus 3 mirvgiIG~----gG--~i~~~h~~~l~~~~~~lvav~d~~~~~-~~----~~~~--~~~~~~~~--~~~~ll~~~~~l~ 67 (312)
T 3o9z_A 3 MTRFALTGL----AG--YIAPRHLKAIKEVGGVLVASLDPATNV-GL----VDSF--FPEAEFFT--EPEAFEAYLEDLR 67 (312)
T ss_dssp CCEEEEECT----TS--SSHHHHHHHHHHTTCEEEEEECSSCCC-GG----GGGT--CTTCEEES--CHHHHHHHHHHHH
T ss_pred ceEEEEECC----Ch--HHHHHHHHHHHhCCCEEEEEEcCCHHH-HH----HHhh--CCCCceeC--CHHHHHHHhhhhc
Confidence 468999874 22 111234555666688888877544321 10 1111 11333332 223333
Q ss_pred -hccCCcEEEEcCchhh--HHHHHHHhcC
Q 016053 147 -TALKADLIVLNTAVAG--KWLDAVLKED 172 (396)
Q Consensus 147 -~~~~~DiV~~~~~~~~--~~~~~~~~~~ 172 (396)
...++|+|++.+|... .+...+...+
T Consensus 68 ~~~~~vD~V~I~tP~~~H~~~~~~al~aG 96 (312)
T 3o9z_A 68 DRGEGVDYLSIASPNHLHYPQIRMALRLG 96 (312)
T ss_dssp HTTCCCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred ccCCCCcEEEECCCchhhHHHHHHHHHCC
Confidence 4678999999987543 3445556666
No 450
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=29.59 E-value=2.3e+02 Score=24.91 Aligned_cols=94 Identities=14% Similarity=0.206 Sum_probs=57.2
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcC
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
---+++.+|- -+...|.|+|-.....=...++.++.. -++++.++|+..-. ..+++.+.+++.|
T Consensus 143 l~Ti~e~~g~-l~gl~va~vGD~~~~rva~Sl~~~~~~------------~G~~v~~~~P~~~~---~~~~~~~~~~~~g 206 (308)
T 1ml4_A 143 LYTIKKEFGR-IDGLKIGLLGDLKYGRTVHSLAEALTF------------YDVELYLISPELLR---MPRHIVEELREKG 206 (308)
T ss_dssp HHHHHHHSSC-SSSEEEEEESCTTTCHHHHHHHHHGGG------------SCEEEEEECCGGGC---CCHHHHHHHHHTT
T ss_pred HHHHHHHhCC-CCCeEEEEeCCCCcCchHHHHHHHHHH------------CCCEEEEECCcccc---CCHHHHHHHHHcC
Confidence 3456777773 356889999976433334455555543 37999999974311 1233555566655
Q ss_pred CCCcEEEecCcCCHHHHHHHcCEEEecCCCCCCCcc
Q 016053 337 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372 (396)
Q Consensus 337 l~~~V~~~g~~~~~~~~~~~aDv~v~pS~~~~E~fg 372 (396)
. .+... +++.+.+..|||+.....- .|.+|
T Consensus 207 ~--~~~~~---~d~~eav~~aDvvyt~~~q-~er~~ 236 (308)
T 1ml4_A 207 M--KVVET---TTLEDVIGKLDVLYVTRIQ-KERFP 236 (308)
T ss_dssp C--CEEEE---SCTHHHHTTCSEEEECCCC-GGGSS
T ss_pred C--eEEEE---cCHHHHhcCCCEEEECCcc-ccccC
Confidence 3 24333 5778899999998875441 34454
No 451
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=29.54 E-value=1.5e+02 Score=25.97 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=45.7
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 152 (396)
++||.+|.. |. .-..+++.|.+ .|+++..++...+. . ........++. ......+....++|
T Consensus 3 ~~~vgiiG~----G~---~g~~~~~~l~~~~~~~l~av~d~~~~----~---~~~~~~~~~~~---~~~~~~~l~~~~~D 65 (331)
T 4hkt_A 3 TVRFGLLGA----GR---IGKVHAKAVSGNADARLVAVADAFPA----A---AEAIAGAYGCE---VRTIDAIEAAADID 65 (331)
T ss_dssp CEEEEEECC----SH---HHHHHHHHHHHCTTEEEEEEECSSHH----H---HHHHHHHTTCE---ECCHHHHHHCTTCC
T ss_pred ceEEEEECC----CH---HHHHHHHHHhhCCCcEEEEEECCCHH----H---HHHHHHHhCCC---cCCHHHHhcCCCCC
Confidence 468998873 22 23345666666 47888877654321 1 11122233555 34445555566899
Q ss_pred EEEEcCchhhH--HHHHHHhcC
Q 016053 153 LIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 153 iV~~~~~~~~~--~~~~~~~~~ 172 (396)
+|++.+|.... ....+...+
T Consensus 66 ~V~i~tp~~~h~~~~~~al~~g 87 (331)
T 4hkt_A 66 AVVICTPTDTHADLIERFARAG 87 (331)
T ss_dssp EEEECSCGGGHHHHHHHHHHTT
T ss_pred EEEEeCCchhHHHHHHHHHHcC
Confidence 99988865432 334444545
No 452
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=29.49 E-value=2.9e+02 Score=24.26 Aligned_cols=89 Identities=12% Similarity=0.112 Sum_probs=54.5
Q ss_pred HHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCc-cchHHHHHHHHHHhc
Q 016053 257 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-QTKFESELRNYVMQK 335 (396)
Q Consensus 257 ~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~-~~~~~~~l~~~~~~~ 335 (396)
---+++.+|- -+...|.|+|-. ...=..-++.++.. -++++.++|+..-. +.+..+.+++.+++.
T Consensus 136 l~Ti~e~~g~-l~gl~va~vGD~-~~rva~Sl~~~~~~------------~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~ 201 (307)
T 2i6u_A 136 LQTIAERKGA-LRGLRLSYFGDG-ANNMAHSLLLGGVT------------AGIHVTVAAPEGFLPDPSVRAAAERRAQDT 201 (307)
T ss_dssp HHHHHHHHSC-CTTCEEEEESCT-TSHHHHHHHHHHHH------------TTCEEEEECCTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-cCCeEEEEECCC-CcCcHHHHHHHHHH------------CCCEEEEECCccccCCHHHHHHHHHHHHHc
Confidence 3456677763 356789999985 22223344444443 27899999975422 122334455666676
Q ss_pred CCCCcEEEecCcCCHHHHHHHcCEEEecC
Q 016053 336 KIQDRVHFVNKTLTVAPYLAAIDVLVQNS 364 (396)
Q Consensus 336 ~l~~~V~~~g~~~~~~~~~~~aDv~v~pS 364 (396)
|. .+.+. +++.+.+..+||+....
T Consensus 202 G~--~~~~~---~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 202 GA--SVTVT---ADAHAAAAGADVLVTDT 225 (307)
T ss_dssp TC--CEEEE---SCHHHHHTTCSEEEECC
T ss_pred CC--eEEEE---ECHHHHhcCCCEEEecc
Confidence 63 34433 67889999999988744
No 453
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=29.44 E-value=1.5e+02 Score=27.42 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=43.2
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCch--hhhhh--ccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ--ETINT--ALK 150 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~ 150 (396)
++|+++. ..++-..+++.|.+.|++|+++-.+.. ..+.+...|+.++.-... ..+.. ..+
T Consensus 5 ~~viIiG-------~Gr~G~~va~~L~~~g~~vvvId~d~~---------~v~~~~~~g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAG-------FGRFGQITGRLLLSSGVKMVVLDHDPD---------HIETLRKFGMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CSEEEEC-------CSHHHHHHHHHHHHTTCCEEEEECCHH---------HHHHHHHTTCCCEESCTTCHHHHHHTTTTT
T ss_pred CeEEEEC-------CCHHHHHHHHHHHHCCCCEEEEECCHH---------HHHHHHhCCCeEEEcCCCCHHHHHhcCCCc
Confidence 4676665 237888899999999999999974422 222334456666543332 22222 367
Q ss_pred CcEEEEcCc
Q 016053 151 ADLIVLNTA 159 (396)
Q Consensus 151 ~DiV~~~~~ 159 (396)
+|+|++..+
T Consensus 69 A~~viv~~~ 77 (413)
T 3l9w_A 69 AEVLINAID 77 (413)
T ss_dssp CSEEEECCS
T ss_pred cCEEEECCC
Confidence 899987764
No 454
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.32 E-value=2.5e+02 Score=23.51 Aligned_cols=215 Identities=10% Similarity=-0.021 Sum_probs=104.9
Q ss_pred cccEEEEEecc-----CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhh
Q 016053 73 KSKLVLLVSHE-----LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147 (396)
Q Consensus 73 ~~~kIl~v~~~-----~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
+.++|.++.+. ....-.......+.+++.+.|+++.++..... ..... .......
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~-----------~~~~~~~ 66 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETE---------EEIFN-----------GVVKMVQ 66 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCCSH---------HHHHH-----------HHHHHHH
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC---------HHHHH-----------HHHHHHH
Confidence 44689999876 44333446777777888889999988653321 00000 0111223
Q ss_pred ccCCcEEEEcCch-hhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhc
Q 016053 148 ALKADLIVLNTAV-AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR 226 (396)
Q Consensus 148 ~~~~DiV~~~~~~-~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g 226 (396)
..++|.|++.... ....+..+...++| ++......... .....+..+.........+.+.+ .|
T Consensus 67 ~~~vdgiIi~~~~~~~~~~~~l~~~~iP-----vV~~~~~~~~~----------~~~~~V~~D~~~~g~~a~~~L~~-~G 130 (292)
T 3k4h_A 67 GRQIGGIILLYSRENDRIIQYLHEQNFP-----FVLIGKPYDRK----------DEITYVDNDNYTAAREVAEYLIS-LG 130 (292)
T ss_dssp TTCCCEEEESCCBTTCHHHHHHHHTTCC-----EEEESCCSSCT----------TTSCEEECCHHHHHHHHHHHHHH-TT
T ss_pred cCCCCEEEEeCCCCChHHHHHHHHCCCC-----EEEECCCCCCC----------CCCCEEEECcHHHHHHHHHHHHH-CC
Confidence 4678888765432 23344555566766 44322221100 01222222322333333344332 23
Q ss_pred ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCC
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 306 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~ 306 (396)
..++.++....+..... .+..--.+.-++.|++.....+. .+.. ..+...+++.++.+ ++
T Consensus 131 --~~~i~~i~~~~~~~~~~------~R~~gf~~~l~~~g~~~~~~~~~-~~~~----~~~~~~~~~~~~l~-------~~ 190 (292)
T 3k4h_A 131 --HKQIAFIGGGSDLLVTR------DRLAGMSDALKLADIVLPKEYIL-HFDF----SRESGQQAVEELMG-------LQ 190 (292)
T ss_dssp --CCCEEEEESCTTBHHHH------HHHHHHHHHHHHTTCCCCGGGEE-ECCS----SHHHHHHHHHHHHT-------SS
T ss_pred --CceEEEEeCcccchhHH------HHHHHHHHHHHHcCCCCChheEE-ecCC----CHHHHHHHHHHHHc-------CC
Confidence 34677776443321110 11111122333456643332232 2332 33444455555433 23
Q ss_pred CCEEEEEEecCCCccchHHHHHHHHHHhcCCC--CcEEEecCcC
Q 016053 307 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--DRVHFVNKTL 348 (396)
Q Consensus 307 ~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~--~~V~~~g~~~ 348 (396)
++...+++.++. ....+.+.+++.|+. +.|.++|+-+
T Consensus 191 ~~~~ai~~~~d~-----~a~g~~~al~~~g~~vP~di~vig~d~ 229 (292)
T 3k4h_A 191 QPPTAIMATDDL-----IGLGVLSALSKKGFVVPKDVSIVSFNN 229 (292)
T ss_dssp SCCSEEEESSHH-----HHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEEcChH-----HHHHHHHHHHHhCCCCCCeEEEEEecC
Confidence 667777777642 334566677777765 7899999753
No 455
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=29.30 E-value=68 Score=27.21 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=22.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 8 k~vlVT-----Gas~gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVT-----GAAQGIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-----CCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence 455566 33334566788899999999988763
No 456
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.24 E-value=85 Score=26.98 Aligned_cols=32 Identities=22% Similarity=0.216 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 30 k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVT-----GGRRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-----cCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 566677 34445667788999999999988863
No 457
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=29.16 E-value=1.2e+02 Score=25.89 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=23.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 28 k~~lVT-----Gas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 28 KVAFIT-----GGGSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEe-----CCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 556666 34445667889999999999988763
No 458
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=29.15 E-value=1.2e+02 Score=26.82 Aligned_cols=89 Identities=19% Similarity=0.123 Sum_probs=48.1
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
++||.+|.. ||... ..++.| ..+.++.-++...+...... +.+.....++..-.......+....++|+
T Consensus 2 ~~rvgiiG~----G~~~~---~~~~~l-~~~~~lvav~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGS----SGHFR---YALEGL-DEECSITGIAPGVPEEDLSK---LEKAISEMNIKPKKYNNWWEMLEKEKPDI 70 (337)
T ss_dssp CEEEEEECS----SSCHH---HHHTTC-CTTEEEEEEECSSTTCCCHH---HHHHHHTTTCCCEECSSHHHHHHHHCCSE
T ss_pred ceEEEEEcc----chhHH---HHHHhc-CCCcEEEEEecCCchhhHHH---HHHHHHHcCCCCcccCCHHHHhcCCCCCE
Confidence 468999873 33222 344445 67889988885543111111 11222222332222345556666678999
Q ss_pred EEEcCchhh--HHHHHHHhcCC
Q 016053 154 IVLNTAVAG--KWLDAVLKEDV 173 (396)
Q Consensus 154 V~~~~~~~~--~~~~~~~~~~~ 173 (396)
|++.+|... .+...+...+.
T Consensus 71 V~I~tp~~~H~~~~~~al~aGk 92 (337)
T 3ip3_A 71 LVINTVFSLNGKILLEALERKI 92 (337)
T ss_dssp EEECSSHHHHHHHHHHHHHTTC
T ss_pred EEEeCCcchHHHHHHHHHHCCC
Confidence 999887543 24445556663
No 459
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.13 E-value=50 Score=29.07 Aligned_cols=36 Identities=25% Similarity=0.014 Sum_probs=23.9
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.|+|++. ||....=..+++.|.++|++|.++...
T Consensus 1 m~~~~vlVt------GatG~iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALIT------GIRGQDGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEE------CCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 344567644 333356677888888999999988743
No 460
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=29.06 E-value=1.7e+02 Score=21.65 Aligned_cols=14 Identities=0% Similarity=0.097 Sum_probs=6.3
Q ss_pred HHHHHHHHHHhcCC
Q 016053 324 FESELRNYVMQKKI 337 (396)
Q Consensus 324 ~~~~l~~~~~~~~l 337 (396)
....+++..++.+.
T Consensus 16 ~~~~l~~~L~~~g~ 29 (152)
T 3heb_A 16 HARLIEKNIRRAGV 29 (152)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCC
Confidence 34444444444443
No 461
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=29.04 E-value=86 Score=29.19 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=23.2
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHHHh-CCCEEEEEecc
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQ 113 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~ 113 (396)
...++||||++. +|+ ....++..+.+ .|+++.++.+.
T Consensus 17 ~~~~~~~iliiG-----~g~--r~~a~a~~~~~~~g~~~v~~~~~ 54 (451)
T 2yrx_A 17 YFQSHMNVLVIG-----RGG--REHAIAWKAAQSPLVGKLYVAPG 54 (451)
T ss_dssp CCCSSEEEEEEE-----CSH--HHHHHHHHHHTCTTEEEEEEEEC
T ss_pred ccCCCCEEEEEC-----CCH--HHHHHHHHHHhcCCCCEEEEECC
Confidence 344557999998 342 23455565644 68988777654
No 462
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=29.00 E-value=64 Score=27.62 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 32 k~~lVT-----Gas~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 32 KTAFVT-----GGSRGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-----CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 566676 344446678899999999999888643
No 463
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=28.96 E-value=95 Score=26.20 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=23.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 9 k~vlVT-----Gas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 9 RTIVVA-----GAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 455566 333345667889999999999888644
No 464
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=28.84 E-value=51 Score=29.17 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=23.6
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
..++|+||+.. |....=..+++.|.++|++|.++...
T Consensus 16 ~~~~~~vlVtG------atG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTG------SAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEET------TTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEEC------CCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 34445676543 33456677888999999999998744
No 465
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=28.78 E-value=97 Score=24.57 Aligned_cols=37 Identities=19% Similarity=0.074 Sum_probs=27.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+++.+.. .+..|=.+.+..|+..|..+|+.|.++...
T Consensus 5 ~~i~i~G-~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 5 NVWQVVG-YKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp CEEEEEC-CTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEEC-CCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 4444443 334565688899999999999999998844
No 466
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=28.78 E-value=79 Score=26.89 Aligned_cols=33 Identities=21% Similarity=0.096 Sum_probs=23.7
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|..+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 30 k~vlIT-----Gas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLIT-----GASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEET-----TCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-----CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455566 344456678889999999999888743
No 467
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=28.77 E-value=1.4e+02 Score=25.76 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=36.9
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcE
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di 153 (396)
.++++++.. || ....++.+|.+.|.+|+|+...... ..... ..++....... + .++|+
T Consensus 118 ~k~vlvlGa----GG---aaraia~~L~~~G~~v~V~nRt~~k--------a~~la-~~~~~~~~~~~---l---~~~Di 175 (269)
T 3phh_A 118 YQNALILGA----GG---SAKALACELKKQGLQVSVLNRSSRG--------LDFFQ-RLGCDCFMEPP---K---SAFDL 175 (269)
T ss_dssp CCEEEEECC----SH---HHHHHHHHHHHTTCEEEEECSSCTT--------HHHHH-HHTCEEESSCC---S---SCCSE
T ss_pred CCEEEEECC----CH---HHHHHHHHHHHCCCEEEEEeCCHHH--------HHHHH-HCCCeEecHHH---h---ccCCE
Confidence 467888762 44 4556677888889888887543221 11111 22333332221 1 27899
Q ss_pred EEEcCch
Q 016053 154 IVLNTAV 160 (396)
Q Consensus 154 V~~~~~~ 160 (396)
|+..++.
T Consensus 176 VInaTp~ 182 (269)
T 3phh_A 176 IINATSA 182 (269)
T ss_dssp EEECCTT
T ss_pred EEEcccC
Confidence 9988764
No 468
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=28.68 E-value=45 Score=26.53 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=26.5
Q ss_pred HHHHHcCEEEe--cCCCCCCCccHHHHHHHhcCCCEEEcC
Q 016053 352 PYLAAIDVLVQ--NSQAWGECFGRITIEAMAFQLPVLVLS 389 (396)
Q Consensus 352 ~~~~~aDv~v~--pS~~~~E~fg~~~lEAma~G~PVI~t~ 389 (396)
+.+..||++|. .-....+|-..-+-=|.|.|+||++-.
T Consensus 77 ~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 77 TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 45889999876 311014455556777899999999983
No 469
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=28.63 E-value=1.8e+02 Score=23.39 Aligned_cols=51 Identities=8% Similarity=0.048 Sum_probs=29.9
Q ss_pred EEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcC
Q 016053 272 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 336 (396)
Q Consensus 272 ~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~ 336 (396)
+|+..+.+ ..+...+.++++.+++ .++++.++|-|.+..+ .+ ++++++..+
T Consensus 110 iil~~~~~--~~~~~~~~~~a~~lk~---------~gi~v~~Ig~G~~~~~--~~-l~~la~~~n 160 (192)
T 2x5n_A 110 VAFVGSPI--VEDEKNLIRLAKRMKK---------NNVAIDIIHIGELQNE--SA-LQHFIDAAN 160 (192)
T ss_dssp EEEECSCC--SSCHHHHHHHHHHHHH---------TTEEEEEEEESCC-----CH-HHHHHHHHC
T ss_pred EEEEECCC--CCCchhHHHHHHHHHH---------CCCEEEEEEeCCCCcc--HH-HHHHHHhcc
Confidence 44444544 2345666777766654 5888888887763321 14 777777654
No 470
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=28.44 E-value=79 Score=28.54 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=24.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+||+++. +| .....+++++++.|++|.++...
T Consensus 2 ~~Ililg-----~g--~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 2 KKIGIIG-----GG--QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC-----CC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899887 33 35667888899999999888754
No 471
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=28.34 E-value=86 Score=26.80 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhhccCCCCEEEEEEecCCCccchHHHHHHHHHHhcCCCCcEEEecCcCCHHHHHHHcC
Q 016053 289 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 358 (396)
Q Consensus 289 i~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~~~aD 358 (396)
...|+.+.+++. ++..++++|+|. ++ ++.+++++.+ +.-+....|+..+..+-|
T Consensus 217 esCFerI~~RFG------~k~~yvvIGDG~-----eE---e~AAk~~n~P--FwrI~~h~Dl~~l~~al~ 270 (274)
T 3geb_A 217 ESCFERIMQRFG------RKAVYVVIGDGV-----EE---EQGAKKHNMP--FWRISCHADLEALRHALE 270 (274)
T ss_dssp HHHHHHHHHHHC------TTSEEEEEESSH-----HH---HHHHHHTTCC--EEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCceEEEECCCH-----HH---HHHHHHcCCC--eEEeecCccHHHHHHhhc
Confidence 456777766662 789999999994 22 3455556654 333333355666655543
No 472
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=28.33 E-value=2.2e+02 Score=22.54 Aligned_cols=46 Identities=7% Similarity=0.125 Sum_probs=31.3
Q ss_pred CEEEEEEecccC----CCCHHHHHHHHHHHHHHHHhhccCC-------CCEEEEEEecCC
Q 016053 270 DLLFAIINSVSR----GKGQDLFLHSFYESLELIKEKKLEV-------PSVHAVIIGSDM 318 (396)
Q Consensus 270 ~~~il~vG~l~~----~Kg~~~li~a~~~l~~~~~~~~~~~-------~~~~l~ivG~g~ 318 (396)
+.+++.+|..+. ....+.+.+.+..+.+.+++ .+ |+.++++++..+
T Consensus 85 d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~---~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 85 DLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLT---SAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp SEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHT---CTTTTTBCCCCCEEEEEECCC
T ss_pred CEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHH---hcccccccCCCCeEEEEeCCC
Confidence 566666766554 23567777888887777766 34 678888887643
No 473
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=28.32 E-value=70 Score=27.16 Aligned_cols=24 Identities=25% Similarity=0.087 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 88 GGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 88 G~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
|..-.=..+++.|.++|++|.++.
T Consensus 24 asggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 24 GAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEc
Confidence 333566778889999999998875
No 474
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=28.22 E-value=1.9e+02 Score=22.85 Aligned_cols=47 Identities=11% Similarity=0.117 Sum_probs=35.0
Q ss_pred CCEEEEEEecccCCCCHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCC
Q 016053 269 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM 318 (396)
Q Consensus 269 ~~~~il~vG~l~~~Kg~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~ 318 (396)
-+.+++.+|..+.....+.+.+.++++.+.+++. +|+.++++++..+
T Consensus 75 pd~Vvi~~G~ND~~~~~~~~~~~l~~ii~~l~~~---~p~~~ii~~~~~P 121 (200)
T 4h08_A 75 FDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKY---APKAKLIWANTTP 121 (200)
T ss_dssp CSEEEECCCSSCTTSCHHHHHHHHHHHHHHHHHH---CTTCEEEEECCCC
T ss_pred CCeEEEEeeeCCCCCCHHHHHHHHHHHHHHHhhh---CCCccEEEeccCC
Confidence 3567777888777777888888888877777663 4889999887543
No 475
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=28.19 E-value=63 Score=26.15 Aligned_cols=68 Identities=6% Similarity=0.042 Sum_probs=37.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhh-hhhccCCcE
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQET-INTALKADL 153 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Di 153 (396)
|||++.. |....=..+++.|.++|++|.++...... ... +. .++.++....... -....++|+
T Consensus 1 MkvlVtG------atG~iG~~l~~~L~~~g~~V~~~~R~~~~--------~~~-~~-~~~~~~~~D~~d~~~~~~~~~d~ 64 (221)
T 3ew7_A 1 MKIGIIG------ATGRAGSRILEEAKNRGHEVTAIVRNAGK--------ITQ-TH-KDINILQKDIFDLTLSDLSDQNV 64 (221)
T ss_dssp CEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESCSHH--------HHH-HC-SSSEEEECCGGGCCHHHHTTCSE
T ss_pred CeEEEEc------CCchhHHHHHHHHHhCCCEEEEEEcCchh--------hhh-cc-CCCeEEeccccChhhhhhcCCCE
Confidence 3666543 33355667888899999999998744221 111 11 3455544332110 033357899
Q ss_pred EEEcC
Q 016053 154 IVLNT 158 (396)
Q Consensus 154 V~~~~ 158 (396)
|+...
T Consensus 65 vi~~a 69 (221)
T 3ew7_A 65 VVDAY 69 (221)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 87665
No 476
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.14 E-value=71 Score=26.90 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=23.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 10 k~vlIT-----Gas~gIG~~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALIT-----GAGSGFGEGMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-----CCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 555566 34344667888999999999888763
No 477
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=28.14 E-value=1.4e+02 Score=24.77 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
||..-.=..+++.|.++|++|.++...
T Consensus 14 GasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 14 GSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 333346667888899999999887644
No 478
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=27.99 E-value=73 Score=26.69 Aligned_cols=32 Identities=25% Similarity=0.104 Sum_probs=23.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 10 k~vlIT-----Gas~giG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 10 KVGIVT-----GSGGGIGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-----CCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 556666 34445667889999999999888763
No 479
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=27.92 E-value=1.6e+02 Score=21.33 Aligned_cols=31 Identities=3% Similarity=-0.085 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCcCCHHHHH
Q 016053 324 FESELRNYVMQKKIQDRVHFVNKTLTVAPYL 354 (396)
Q Consensus 324 ~~~~l~~~~~~~~l~~~V~~~g~~~~~~~~~ 354 (396)
....+.+..++.+....|......++....+
T Consensus 19 ~~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l 49 (143)
T 2qvg_A 19 DIQSVERVFHKISSLIKIEIAKSGNQALDML 49 (143)
T ss_dssp HHHHHHHHHHHHCTTCCEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEECCHHHHHHHH
Confidence 3444444444444322344443333333333
No 480
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=27.91 E-value=2.8e+02 Score=23.55 Aligned_cols=209 Identities=11% Similarity=0.038 Sum_probs=96.3
Q ss_pred cccEEEEEecc-----CCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhh
Q 016053 73 KSKLVLLVSHE-----LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147 (396)
Q Consensus 73 ~~~kIl~v~~~-----~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
+..+|.++.+. ....-....+..+.+.+.+.|+++.++..... ...... ......
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------~~~~~~-----------~~~~l~ 80 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSENS---------GDLYHE-----------VKTMIQ 80 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCSSH---------HHHHHH-----------HHHHHH
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCCCC---------hHHHHH-----------HHHHHH
Confidence 34579988875 22222235566667778888999988653321 000000 011223
Q ss_pred ccCCcEEEEcCch-hhHHHHHHHhcCCCccccceeeeeeecccccCchhhhccccccccceeeccccHHHHHHHHHhhhc
Q 016053 148 ALKADLIVLNTAV-AGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLR 226 (396)
Q Consensus 148 ~~~~DiV~~~~~~-~~~~~~~~~~~~~~~~~~~vv~~~h~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g 226 (396)
..++|.|++.... ....+..+...++| ++...... .. .....+..+.........+.+.+ .|
T Consensus 81 ~~~vdgiIi~~~~~~~~~~~~l~~~~iP-----vV~i~~~~-----~~------~~~~~V~~D~~~~g~~a~~~L~~-~G 143 (305)
T 3huu_A 81 SKSVDGFILLYSLKDDPIEHLLNEFKVP-----YLIVGKSL-----NY------ENIIHIDNDNIDAAYQLTQYLYH-LG 143 (305)
T ss_dssp TTCCSEEEESSCBTTCHHHHHHHHTTCC-----EEEESCCC-----SS------TTCCEEECCHHHHHHHHHHHHHH-TT
T ss_pred hCCCCEEEEeCCcCCcHHHHHHHHcCCC-----EEEECCCC-----cc------cCCcEEEeCHHHHHHHHHHHHHH-CC
Confidence 4678888766432 23344555566766 33322211 00 11222233333333333344432 23
Q ss_pred ccCCCEEEEecCCccchhhhhhhhHHHHHhHHHHHHHcCCCCCCEEEEEEecccCCCCHHHHHHHHHHH-HHHHHhhccC
Q 016053 227 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYES-LELIKEKKLE 305 (396)
Q Consensus 227 ~~~~k~~vI~ngid~~~~~~~~~~~~~~~~~~~~r~~~g~~~~~~~il~vG~l~~~Kg~~~li~a~~~l-~~~~~~~~~~ 305 (396)
..++.++....+..... .+..--.+.-++.|++... ++.+.... ..+++.++ .+ +
T Consensus 144 --~~~I~~i~~~~~~~~~~------~R~~Gf~~~l~~~g~~~~~---~~~~~~~~------~~~~~~~~~l~---~---- 199 (305)
T 3huu_A 144 --HRHILFLQESGHYAVTE------DRSVGFKQYCDDVKISNDC---VVIKSMND------LRDFIKQYCID---A---- 199 (305)
T ss_dssp --CCSEEEEEESSCBHHHH------HHHHHHHHHHHHTTCCCCE---EEECSHHH------HHHHC--------------
T ss_pred --CCeEEEEcCCcccchhH------HHHHHHHHHHHHcCCCccc---EEecCcHH------HHHHHHHhhhc---C----
Confidence 35677775433221110 0111112233445665443 23343222 33333333 32 1
Q ss_pred CCCEEEEEEecCCCccchHHHHHHHHHHhcCCC--CcEEEecCc
Q 016053 306 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--DRVHFVNKT 347 (396)
Q Consensus 306 ~~~~~l~ivG~g~~~~~~~~~~l~~~~~~~~l~--~~V~~~g~~ 347 (396)
.++...+++.++. .-..+.+.+++.|+. +.|.++|+-
T Consensus 200 ~~~~~ai~~~nd~-----~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 200 SHMPSVIITSDVM-----LNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp -CCCSEEEESSHH-----HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCCCEEEECChH-----HHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 2566677777532 333466677777764 789999975
No 481
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=27.85 E-value=84 Score=22.99 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=23.3
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEe
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~ 111 (396)
++++++||++.. -+.....+...|.+.|++|..+.
T Consensus 3 ~~~~~~iLivdd------~~~~~~~l~~~l~~~g~~v~~~~ 37 (140)
T 3grc_A 3 LAPRPRILICED------DPDIARLLNLMLEKGGFDSDMVH 37 (140)
T ss_dssp --CCSEEEEECS------CHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCCEEEEcC------CHHHHHHHHHHHHHCCCeEEEEC
Confidence 344578999874 23556667777888999976554
No 482
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=27.76 E-value=1e+02 Score=30.61 Aligned_cols=45 Identities=18% Similarity=0.098 Sum_probs=34.3
Q ss_pred CCcccccccEEEEEeccCCCCChH-HHHHHHHHHHHhCCCEEEEEecc
Q 016053 67 SPLSFMKSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 67 ~~~~~m~~~kIl~v~~~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
.+...|+.+||+++... ..|.+ .-+..+...|++.|.+|++++..
T Consensus 522 ~~~~~l~g~kVaIL~a~--~dGfe~~E~~~~~~~L~~aG~~V~vVs~~ 567 (688)
T 2iuf_A 522 EKLAKLDGLKVGLLASV--NKPASIAQGAKLQVALSSVGVDVVVVAER 567 (688)
T ss_dssp SCCSCCTTCEEEEECCT--TCHHHHHHHHHHHHHHGGGTCEEEEEESS
T ss_pred CCCCCCCCCEEEEEecC--CCCCcHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34445677899988731 24555 77899999999999999999964
No 483
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=27.73 E-value=2.1e+02 Score=25.31 Aligned_cols=85 Identities=8% Similarity=0.048 Sum_probs=45.4
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHH-h-CCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCC
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLR-G-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~-~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (396)
++||.+|.. | ..-...+..|. + .|+++..++...+. . ........++..........+....++
T Consensus 2 ~~rigiIG~-----G--~~g~~~~~~l~~~~~~~~l~av~d~~~~----~---~~~~~~~~g~~~~~~~~~~~ll~~~~~ 67 (344)
T 3mz0_A 2 SLRIGVIGT-----G--AIGKEHINRITNKLSGAEIVAVTDVNQE----A---AQKVVEQYQLNATVYPNDDSLLADENV 67 (344)
T ss_dssp CEEEEEECC-----S--HHHHHHHHHHHHTCSSEEEEEEECSSHH----H---HHHHHHHTTCCCEEESSHHHHHHCTTC
T ss_pred eEEEEEECc-----c--HHHHHHHHHHHhhCCCcEEEEEEcCCHH----H---HHHHHHHhCCCCeeeCCHHHHhcCCCC
Confidence 468998873 2 23335566676 4 57888767654321 1 111122234212223344556666789
Q ss_pred cEEEEcCchhhH--HHHHHHhcC
Q 016053 152 DLIVLNTAVAGK--WLDAVLKED 172 (396)
Q Consensus 152 DiV~~~~~~~~~--~~~~~~~~~ 172 (396)
|+|++.++.... +...+...+
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~G 90 (344)
T 3mz0_A 68 DAVLVTSWGPAHESSVLKAIKAQ 90 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTT
T ss_pred CEEEECCCchhHHHHHHHHHHCC
Confidence 999988864432 334455555
No 484
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=27.64 E-value=2.7e+02 Score=23.23 Aligned_cols=41 Identities=10% Similarity=-0.140 Sum_probs=29.2
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
+..+|.++.+.....-....+..+.+.+.+.|+++.++...
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (277)
T 3cs3_A 7 QTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGK 47 (277)
T ss_dssp CCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEEST
T ss_pred CCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44579988876443333467777788888999999887643
No 485
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=27.63 E-value=75 Score=26.90 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=25.4
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
+++.++ .-...|-.+...+|+..|+++|++|.++-.
T Consensus 2 ~vI~vs-~KGGvGKTT~a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 2 RQVAIY-GKGGIGKSTTTQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp EEEEEE-ECTTSSHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred cEEEEe-cCCCCcHHHHHHHHHHHHHHCCCcEEEEcC
Confidence 344444 322234448889999999999999999863
No 486
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=27.57 E-value=2.3e+02 Score=25.65 Aligned_cols=90 Identities=17% Similarity=0.105 Sum_probs=48.3
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccCCcEEE
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIV 155 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiV~ 155 (396)
.+++++...........+..++++|.+.++++.+.+....... . +.. + ..++.+...-... .-....|+++
T Consensus 256 ~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~-~----~~~-~-~~~v~~~~~~~~~--~~l~~~d~~v 326 (424)
T 2iya_A 256 PVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPA-D----LGE-V-PPNVEVHQWVPQL--DILTKASAFI 326 (424)
T ss_dssp CEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGG-G----GCS-C-CTTEEEESSCCHH--HHHTTCSEEE
T ss_pred CEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChH-H----hcc-C-CCCeEEecCCCHH--HHHhhCCEEE
Confidence 3444543221123356788889999888888887775432110 0 111 1 1245554322222 2335789999
Q ss_pred EcCchhhHHHHHHHhcCCCcc
Q 016053 156 LNTAVAGKWLDAVLKEDVPRV 176 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~ 176 (396)
+|..... +..+...++|.+
T Consensus 327 ~~~G~~t--~~Ea~~~G~P~i 345 (424)
T 2iya_A 327 THAGMGS--TMEALSNAVPMV 345 (424)
T ss_dssp ECCCHHH--HHHHHHTTCCEE
T ss_pred ECCchhH--HHHHHHcCCCEE
Confidence 9876432 245566777754
No 487
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=27.53 E-value=2e+02 Score=25.30 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=45.5
Q ss_pred cccEEEEEeccCCCCCh-HHHHHHHHHHHHhC-CCEEEEEeccCCCCchhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 73 KSKLVLLVSHELSLSGG-PLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~-~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
+..+|+++.. |. .+....++.++... |.+|.++++.+-..... +.+.....|..+........ .-.+
T Consensus 153 ~gl~va~vGD-----~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~----~~~~~~~~g~~~~~~~d~~e--av~~ 221 (310)
T 3csu_A 153 DNLHVAMVGD-----LKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQY----ILDMLDEKGIAWSLHSSIEE--VMAE 221 (310)
T ss_dssp SSCEEEEESC-----TTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHH----HHHHHHHTTCCEEECSCGGG--TTTT
T ss_pred CCcEEEEECC-----CCCCchHHHHHHHHHhCCCCEEEEECCcccccCHH----HHHHHHHcCCeEEEEcCHHH--HhcC
Confidence 3468988773 21 37999999999999 99999999765432222 11222334544332222221 1257
Q ss_pred CcEEEEcC
Q 016053 151 ADLIVLNT 158 (396)
Q Consensus 151 ~DiV~~~~ 158 (396)
.|+|+...
T Consensus 222 aDvvyt~~ 229 (310)
T 3csu_A 222 VDILYMTR 229 (310)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89998864
No 488
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=27.51 E-value=75 Score=26.63 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=23.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+.+|+ ||..-.=..+++.|.++|++|.++...
T Consensus 2 k~vlVT-----Gas~gIG~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 2 SIIVIS-----GCATGIGAATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 445566 333346677888899999999888643
No 489
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=27.42 E-value=83 Score=26.41 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=22.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
|..+|+ ||..-.=..+++.|.++|++|.++..
T Consensus 15 k~vlIT-----GasggiG~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 15 KTIIVT-----GGNRGIGLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp EEEEEE-----TTTSHHHHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEE-----CCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 444555 33334667788899999999988874
No 490
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=27.36 E-value=1.2e+02 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.102 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 73 ~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++++|+++. +| ..-..+++++++.|++|.++...
T Consensus 11 ~~~~IlIlG-----~G--~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 11 FGATIGIIG-----GG--QLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp TTCEEEEEC-----CS--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC-----CC--HHHHHHHHHHHHCCCEEEEEECC
Confidence 456888876 33 35677899999999999998643
No 491
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=27.30 E-value=1.2e+02 Score=24.09 Aligned_cols=40 Identities=10% Similarity=0.162 Sum_probs=27.8
Q ss_pred ccccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccC
Q 016053 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (396)
Q Consensus 72 m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~ 114 (396)
|+++||+++.. .|-...-+....+.|+..|++|.+++...
T Consensus 7 ~~~~~v~il~~---~g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAA---DGVEEIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECC---TTCBHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeC---CCCCHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45578998864 22223455666778888999999998654
No 492
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=27.15 E-value=58 Score=29.05 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=24.3
Q ss_pred cccccEEEEEeccCCCCChHHHHHHHHHHHHhC-CC-EEEEEec
Q 016053 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GT-KVNWITI 112 (396)
Q Consensus 71 ~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~-G~-~V~vi~~ 112 (396)
+|+.|+||+ + ||....=..+++.|.+. |+ +|.++..
T Consensus 18 ~~~~k~vlV-T-----GatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 18 MLDNQTILI-T-----GGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TTTTCEEEE-E-----TTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred hhCCCEEEE-E-----CCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 445566664 4 34445667778888888 97 8888874
No 493
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=27.13 E-value=2.7e+02 Score=24.67 Aligned_cols=33 Identities=6% Similarity=0.043 Sum_probs=24.0
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 76 kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|+++|+ ||..-.=..+++.|.++|++|.++...
T Consensus 46 k~vlVT-----Gas~GIG~aia~~La~~Ga~Vvl~~r~ 78 (346)
T 3kvo_A 46 CTVFIT-----GASRGIGKAIALKAAKDGANIVIAAKT 78 (346)
T ss_dssp CEEEEE-----TTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEe-----CCChHHHHHHHHHHHHCCCEEEEEECC
Confidence 566666 333446677899999999999888743
No 494
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=27.13 E-value=29 Score=29.91 Aligned_cols=36 Identities=17% Similarity=0.023 Sum_probs=23.8
Q ss_pred ccEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
|++||+|..... +.-...+.++|++.|++|+++...
T Consensus 4 m~~vLiV~g~~~----~~~a~~l~~aL~~~g~~V~~i~~~ 39 (259)
T 3rht_A 4 MTRVLYCGDTSL----ETAAGYLAGLMTSWQWEFDYIPSH 39 (259)
T ss_dssp --CEEEEESSCT----TTTHHHHHHHHHHTTCCCEEECTT
T ss_pred CceEEEECCCCc----hhHHHHHHHHHHhCCceEEEeccc
Confidence 368999952211 234456677888999999999754
No 495
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=26.92 E-value=77 Score=26.32 Aligned_cols=27 Identities=22% Similarity=0.062 Sum_probs=20.0
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEecc
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
||..-.=..+++.|.++|++|.++...
T Consensus 8 Gasg~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 8 GSASGIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 333456677788899999999988743
No 496
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=26.91 E-value=1e+02 Score=28.25 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=17.8
Q ss_pred ccccccEEEEEeccCCCCChHHHHHHHHHHH-HhCCCEEEEE
Q 016053 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWI 110 (396)
Q Consensus 70 ~~m~~~kIl~v~~~~~~gG~~~~~~~l~~~L-~~~G~~V~vi 110 (396)
.-||+|+|+++. +|+. ...++..+ ++.| +|.++
T Consensus 11 ~~~~~~~vlviG-----~Ggr--~~a~a~~~a~~~g-~v~~~ 44 (412)
T 1vkz_A 11 HHMKAVRVHILG-----SGGR--EHAIGWAFAKQGY-EVHFY 44 (412)
T ss_dssp -----CEEEEEE-----CSHH--HHHHHHHHHHTTC-EEEEE
T ss_pred hccccCEEEEEC-----CCHH--HHHHHHHHHhCCC-CEEEE
Confidence 468889999998 3432 23445444 5577 77777
No 497
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=26.89 E-value=2.9e+02 Score=24.82 Aligned_cols=97 Identities=10% Similarity=0.045 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHHHhhccCCCCEEEEEEecCCCccch-HHHHHHHHHHhcCCCCcEEEecCc-CC---HHHHHHHcC
Q 016053 284 GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK-FESELRNYVMQKKIQDRVHFVNKT-LT---VAPYLAAID 358 (396)
Q Consensus 284 g~~~li~a~~~l~~~~~~~~~~~~~~~l~ivG~g~~~~~~-~~~~l~~~~~~~~l~~~V~~~g~~-~~---~~~~~~~aD 358 (396)
++..+++.+..+.+. ...-+++|+.....+..+ ..+.+.+.+.+.+. .+....-. .+ +.+-+..+|
T Consensus 235 ~~~~~~~~~~~~~~~-------~~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~d 305 (402)
T 1e5d_A 235 QCTFAVQKYVEYAEQ-------KPTNKVVIFYDSMWHSTEKMARVLAESFRDEGC--TVKLMWCKACHHSQIMSEISDAG 305 (402)
T ss_dssp HHHHHHHHHHHHHHC-------CCCSEEEEEECCSSSHHHHHHHHHHHHHHHTTC--EEEEEETTTSCHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHhcC-------CCCCcEEEEEECCChhHHHHHHHHHHHHHhCCC--eEEEEECCCCCHHHHHHHHHHCC
Confidence 567777776665431 123456666544433222 23344444444443 24443322 23 334468999
Q ss_pred EEEecCCCCCCCccHHHH---HHHh----cCCCEEEcC
Q 016053 359 VLVQNSQAWGECFGRITI---EAMA----FQLPVLVLS 389 (396)
Q Consensus 359 v~v~pS~~~~E~fg~~~l---EAma----~G~PVI~t~ 389 (396)
.+++.+-.|.++.+-.+. +.+. .|++++...
T Consensus 306 ~ii~gsp~~~~~~~~~~~~~l~~l~~~~l~~k~~~~f~ 343 (402)
T 1e5d_A 306 AVIVGSPTHNNGILPYVAGTLQYIKGLRPQNKIGGAFG 343 (402)
T ss_dssp EEEEECCCBTTBCCHHHHHHHHHHHHTCCCSCEEEEEE
T ss_pred EEEEECCccCCCchHHHHHHHHHhhhcccCCCEEEEEE
Confidence 988766433666665443 3332 367766443
No 498
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=26.89 E-value=64 Score=29.41 Aligned_cols=77 Identities=16% Similarity=0.218 Sum_probs=49.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHhCCCEEEEEeccCCC----CchhhhhhhhhhhhhcceEEEEcCchhhhhhccC
Q 016053 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (396)
Q Consensus 75 ~kIl~v~~~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (396)
++|+++. || ..-.+++..|.+.|.+|+++...... .+......+.+.+...|+++........+.....
T Consensus 147 ~~vvVIG-----gG--~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~~ 219 (385)
T 3klj_A 147 GKAFIIG-----GG--ILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLIR 219 (385)
T ss_dssp SCEEEEC-----CS--HHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHHH
T ss_pred CeEEEEC-----CC--HHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEEe
Confidence 4676664 33 56678899999999999999743221 2233334455666777888876554443334456
Q ss_pred CcEEEEcC
Q 016053 151 ADLIVLNT 158 (396)
Q Consensus 151 ~DiV~~~~ 158 (396)
+|+|+...
T Consensus 220 ~D~vv~a~ 227 (385)
T 3klj_A 220 SSCVITAV 227 (385)
T ss_dssp HSEEEECC
T ss_pred cCeEEECc
Confidence 89988766
No 499
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=26.84 E-value=1.3e+02 Score=23.01 Aligned_cols=37 Identities=14% Similarity=-0.024 Sum_probs=25.2
Q ss_pred ccEEEEEeccCCCCChH--HHHHHHHHHHHhCCCEEEEEecc
Q 016053 74 SKLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQ 113 (396)
Q Consensus 74 ~~kIl~v~~~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~ 113 (396)
++|+++|.+... .+ .....++......|++|.++...
T Consensus 7 ~~kl~II~~sg~---~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 7 KKKLSIIVFSGT---IDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp CCEEEEEECCCS---HHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cCCEEEEEEcCC---HHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 457777765433 33 45566777777899999999843
No 500
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=26.80 E-value=68 Score=27.14 Aligned_cols=26 Identities=19% Similarity=-0.020 Sum_probs=19.5
Q ss_pred CChHHHHHHHHHHHHhCCCEEEEEec
Q 016053 87 SGGPLLLMELAFLLRGVGTKVNWITI 112 (396)
Q Consensus 87 gG~~~~~~~l~~~L~~~G~~V~vi~~ 112 (396)
||..-.=..+++.|.++|++|.++..
T Consensus 28 GasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 28 GAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 34345667788889999999988764
Done!