Query 016055
Match_columns 396
No_of_seqs 486 out of 1332
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 03:22:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016055.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016055hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 1.3E-44 2.9E-49 319.0 35.0 389 4-394 68-471 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 1.4E-40 3.1E-45 308.0 30.5 374 5-391 65-502 (502)
3 TIGR01299 synapt_SV2 synaptic 100.0 7.9E-41 1.7E-45 313.9 28.3 367 4-384 210-740 (742)
4 KOG0254 Predicted transporter 100.0 1E-38 2.2E-43 295.5 35.4 389 6-394 99-500 (513)
5 TIGR00898 2A0119 cation transp 100.0 2.3E-39 5.1E-44 301.3 28.2 368 4-387 135-504 (505)
6 PRK10077 xylE D-xylose transpo 100.0 4.5E-38 9.7E-43 291.1 34.2 378 4-394 63-474 (479)
7 PF00083 Sugar_tr: Sugar (and 100.0 9.3E-45 2E-49 333.0 -20.7 385 4-392 54-451 (451)
8 PRK10642 proline/glycine betai 100.0 4.6E-37 1E-41 283.5 27.4 342 7-383 68-435 (490)
9 TIGR00879 SP MFS transporter, 100.0 8E-36 1.7E-40 276.6 32.8 382 4-386 79-479 (481)
10 KOG0253 Synaptic vesicle trans 100.0 2.5E-35 5.4E-40 243.0 22.8 364 6-385 123-527 (528)
11 KOG0255 Synaptic vesicle trans 100.0 2E-34 4.3E-39 268.6 30.2 375 4-392 126-507 (521)
12 PRK09952 shikimate transporter 100.0 2.2E-33 4.7E-38 255.5 28.3 330 9-379 77-434 (438)
13 PRK10406 alpha-ketoglutarate t 100.0 6.4E-33 1.4E-37 252.4 28.7 318 9-372 76-418 (432)
14 PRK12307 putative sialic acid 100.0 8.5E-33 1.8E-37 252.1 26.4 317 4-354 61-384 (426)
15 COG2814 AraJ Arabinose efflux 100.0 8.8E-33 1.9E-37 237.0 24.7 319 3-373 55-381 (394)
16 TIGR00903 2A0129 major facilit 100.0 1.5E-32 3.3E-37 242.8 25.3 319 4-373 34-361 (368)
17 TIGR00891 2A0112 putative sial 100.0 4.2E-32 9.2E-37 246.1 28.9 326 5-354 56-391 (405)
18 PRK11551 putative 3-hydroxyphe 100.0 2.8E-32 6.1E-37 247.1 24.1 305 5-354 59-371 (406)
19 PRK11663 regulatory protein Uh 100.0 1.8E-32 4E-37 249.4 21.3 343 4-379 66-426 (434)
20 PRK10489 enterobactin exporter 100.0 4.8E-32 1E-36 246.0 23.6 342 5-394 61-416 (417)
21 COG2271 UhpC Sugar phosphate p 100.0 4.6E-33 1E-37 235.3 14.9 343 4-377 72-434 (448)
22 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.5E-31 3.2E-36 241.5 25.7 328 4-353 51-395 (412)
23 PRK15075 citrate-proton sympor 100.0 3.6E-31 7.8E-36 241.1 27.5 299 11-353 71-394 (434)
24 PRK03545 putative arabinose tr 100.0 1.7E-31 3.7E-36 240.2 24.0 315 5-373 53-376 (390)
25 PRK09556 uhpT sugar phosphate 100.0 4.5E-32 9.7E-37 249.3 19.3 321 4-352 72-411 (467)
26 PRK09705 cynX putative cyanate 100.0 5E-31 1.1E-35 236.9 24.8 325 4-384 52-388 (393)
27 KOG0252 Inorganic phosphate tr 100.0 3.7E-33 8E-38 237.1 9.8 371 6-392 94-512 (538)
28 TIGR00893 2A0114 d-galactonate 100.0 4.3E-31 9.2E-36 238.9 22.4 343 5-370 38-392 (399)
29 TIGR00890 2A0111 Oxalate/Forma 100.0 1.3E-30 2.8E-35 234.1 24.7 317 4-366 46-371 (377)
30 PRK05122 major facilitator sup 100.0 8.1E-31 1.7E-35 236.9 23.3 323 4-384 59-395 (399)
31 PRK11273 glpT sn-glycerol-3-ph 100.0 3E-30 6.4E-35 236.2 25.7 355 4-388 71-445 (452)
32 PRK03893 putative sialic acid 100.0 8.6E-30 1.9E-34 236.8 27.2 349 5-363 64-439 (496)
33 TIGR00883 2A0106 metabolite-pr 100.0 1.7E-29 3.6E-34 228.3 28.3 303 11-355 50-377 (394)
34 PRK12382 putative transporter; 100.0 1.4E-29 3.1E-34 228.1 26.1 312 4-372 59-384 (392)
35 TIGR00895 2A0115 benzoate tran 100.0 2.6E-30 5.6E-35 233.9 21.2 328 6-350 62-397 (398)
36 TIGR00900 2A0121 H+ Antiporter 100.0 1.7E-30 3.7E-35 232.3 19.8 306 5-353 43-363 (365)
37 PRK10091 MFS transport protein 100.0 1.7E-29 3.6E-34 226.5 24.3 310 4-366 46-365 (382)
38 PRK10213 nepI ribonucleoside t 100.0 5E-29 1.1E-33 223.7 26.9 311 5-369 64-383 (394)
39 PRK14995 methyl viologen resis 100.0 7E-30 1.5E-34 236.0 20.8 334 4-352 49-412 (495)
40 PRK11195 lysophospholipid tran 100.0 2.8E-29 6.1E-34 225.3 22.5 326 4-376 46-379 (393)
41 TIGR00894 2A0114euk Na(+)-depe 100.0 2.6E-29 5.6E-34 231.4 22.4 345 4-374 84-447 (465)
42 PRK03699 putative transporter; 100.0 5.6E-29 1.2E-33 224.1 23.1 314 5-371 51-374 (394)
43 TIGR00712 glpT glycerol-3-phos 100.0 2E-29 4.3E-34 229.9 19.5 352 4-381 69-437 (438)
44 TIGR00899 2A0120 sugar efflux 100.0 1E-28 2.3E-33 221.5 22.8 312 8-372 45-369 (375)
45 PRK09874 drug efflux system pr 100.0 9.9E-29 2.1E-33 224.2 22.7 317 7-374 65-395 (408)
46 KOG2532 Permease of the major 100.0 8.8E-29 1.9E-33 221.7 21.6 340 4-377 81-447 (466)
47 PRK10504 putative transporter; 100.0 8.7E-29 1.9E-33 228.4 21.8 332 5-352 54-414 (471)
48 PRK15402 multidrug efflux syst 100.0 2.2E-28 4.9E-33 221.3 22.8 316 5-364 57-381 (406)
49 PRK03633 putative MFS family t 100.0 6.3E-28 1.4E-32 216.3 24.9 308 4-369 49-364 (381)
50 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-29 3.9E-34 226.8 14.7 324 5-353 39-372 (379)
51 PF07690 MFS_1: Major Facilita 100.0 1.1E-28 2.3E-33 219.6 17.1 301 5-344 41-352 (352)
52 PLN00028 nitrate transmembrane 100.0 2.5E-28 5.4E-33 224.2 19.7 328 4-373 79-429 (476)
53 cd06174 MFS The Major Facilita 100.0 2.9E-27 6.2E-32 210.3 25.7 294 6-372 44-347 (352)
54 TIGR00711 efflux_EmrB drug res 100.0 4.8E-28 1.1E-32 224.7 21.5 335 4-352 45-409 (485)
55 PRK11043 putative transporter; 100.0 1.8E-27 4E-32 215.1 24.5 302 4-353 49-357 (401)
56 TIGR00710 efflux_Bcr_CflA drug 100.0 1.3E-27 2.7E-32 215.3 23.0 303 5-352 49-360 (385)
57 PRK11646 multidrug resistance 100.0 1.8E-27 3.8E-32 214.2 23.6 290 12-353 62-359 (400)
58 TIGR00892 2A0113 monocarboxyla 100.0 1.1E-28 2.4E-33 225.4 15.5 334 7-369 65-413 (455)
59 PRK15403 multidrug efflux syst 100.0 3.9E-27 8.5E-32 212.7 25.1 324 4-371 59-391 (413)
60 TIGR00897 2A0118 polyol permea 100.0 4.9E-27 1.1E-31 211.9 25.0 326 4-372 56-396 (402)
61 KOG1330 Sugar transporter/spin 100.0 2E-29 4.3E-34 215.5 8.8 322 4-352 76-411 (493)
62 PRK10473 multidrug efflux syst 100.0 6.8E-27 1.5E-31 210.8 25.3 293 5-352 47-348 (392)
63 PRK10054 putative transporter; 100.0 1.2E-27 2.6E-32 214.9 19.9 315 7-369 54-376 (395)
64 PRK11010 ampG muropeptide tran 100.0 1.2E-26 2.6E-31 213.5 26.9 327 11-379 60-404 (491)
65 PRK15034 nitrate/nitrite trans 100.0 1E-26 2.2E-31 207.0 22.7 316 11-376 85-453 (462)
66 PRK11102 bicyclomycin/multidru 100.0 1.5E-26 3.2E-31 207.7 23.8 299 5-347 35-343 (377)
67 KOG2533 Permease of the major 100.0 1.5E-27 3.2E-32 214.2 14.2 328 3-359 88-438 (495)
68 PRK15011 sugar efflux transpor 99.9 1.2E-25 2.5E-30 202.4 24.7 317 6-378 62-391 (393)
69 PRK10133 L-fucose transporter; 99.9 6.5E-26 1.4E-30 205.8 22.4 300 3-353 68-407 (438)
70 TIGR00885 fucP L-fucose:H+ sym 99.9 1.7E-25 3.8E-30 201.2 24.3 296 4-353 46-381 (410)
71 PRK08633 2-acyl-glycerophospho 99.9 6.1E-26 1.3E-30 231.3 23.6 307 4-352 55-383 (1146)
72 PRK06814 acylglycerophosphoeth 99.9 9.5E-26 2.1E-30 229.1 24.8 316 5-352 61-395 (1140)
73 TIGR00896 CynX cyanate transpo 99.9 2.2E-25 4.8E-30 198.2 24.2 296 4-354 43-349 (355)
74 PRK09528 lacY galactoside perm 99.9 1.5E-25 3.2E-30 203.7 22.2 336 5-379 55-405 (420)
75 COG2223 NarK Nitrate/nitrite t 99.9 5.9E-26 1.3E-30 192.8 17.3 317 15-377 68-401 (417)
76 TIGR00886 2A0108 nitrite extru 99.9 4.3E-26 9.4E-31 203.9 16.2 299 4-339 45-365 (366)
77 PRK11652 emrD multidrug resist 99.9 2.4E-25 5.3E-30 200.8 20.4 300 5-353 52-360 (394)
78 PRK11902 ampG muropeptide tran 99.9 4E-24 8.6E-29 193.1 26.5 314 10-369 46-382 (402)
79 TIGR00889 2A0110 nucleoside tr 99.9 7.5E-25 1.6E-29 197.9 21.1 331 4-383 46-408 (418)
80 TIGR00902 2A0127 phenyl propri 99.9 1.5E-24 3.2E-29 194.5 22.4 311 6-369 49-371 (382)
81 PRK10207 dipeptide/tripeptide 99.9 1.9E-24 4.1E-29 197.9 22.2 336 8-350 62-438 (489)
82 TIGR00882 2A0105 oligosacchari 99.9 2.2E-24 4.8E-29 194.5 22.0 327 5-372 47-390 (396)
83 KOG2615 Permease of the major 99.9 3.8E-25 8.2E-30 184.2 14.2 314 8-352 80-413 (451)
84 PRK11128 putative 3-phenylprop 99.9 5.4E-24 1.2E-28 190.9 22.7 310 5-367 48-369 (382)
85 TIGR00901 2A0125 AmpG-related 99.9 2.9E-24 6.3E-29 191.2 19.9 292 13-337 38-355 (356)
86 PF05977 MFS_3: Transmembrane 99.9 5.2E-24 1.1E-28 194.4 21.9 317 9-371 58-388 (524)
87 TIGR00792 gph sugar (Glycoside 99.9 2.1E-24 4.5E-29 197.6 18.5 299 8-352 47-379 (437)
88 KOG3764 Vesicular amine transp 99.9 1.8E-25 3.9E-30 187.2 8.6 319 8-373 118-450 (464)
89 KOG2504 Monocarboxylate transp 99.9 5.8E-25 1.3E-29 199.6 10.9 346 7-372 92-471 (509)
90 TIGR00924 yjdL_sub1_fam amino 99.9 6.1E-23 1.3E-27 188.0 23.4 361 5-374 57-465 (475)
91 COG0738 FucP Fucose permease [ 99.9 2.5E-22 5.3E-27 169.7 18.6 298 4-354 56-385 (422)
92 PF06609 TRI12: Fungal trichot 99.9 2.3E-21 5E-26 176.4 22.5 332 7-351 89-465 (599)
93 TIGR00806 rfc RFC reduced fola 99.9 4.6E-22 9.9E-27 174.0 17.1 329 4-347 70-409 (511)
94 TIGR00805 oat sodium-independe 99.9 3.4E-22 7.4E-27 188.1 16.2 256 4-272 76-415 (633)
95 TIGR01301 GPH_sucrose GPH fami 99.9 9.3E-21 2E-25 170.3 23.7 347 8-382 51-476 (477)
96 TIGR02718 sider_RhtX_FptX side 99.9 1.7E-20 3.7E-25 168.9 23.5 314 11-368 53-382 (390)
97 PRK09584 tppB putative tripept 99.9 6.3E-21 1.4E-25 175.8 20.6 332 11-348 72-439 (500)
98 PTZ00207 hypothetical protein; 99.9 5.7E-20 1.2E-24 168.5 24.5 347 12-377 77-552 (591)
99 PF11700 ATG22: Vacuole efflux 99.9 2.2E-19 4.9E-24 162.4 26.2 341 10-383 84-473 (477)
100 COG2807 CynX Cyanate permease 99.9 1.3E-19 2.9E-24 151.0 22.2 296 8-358 59-365 (395)
101 PRK09669 putative symporter Ya 99.8 3.8E-20 8.2E-25 169.3 16.9 295 10-352 59-387 (444)
102 PF13347 MFS_2: MFS/sugar tran 99.8 1.4E-18 3E-23 158.3 21.0 298 12-352 53-383 (428)
103 PRK15462 dipeptide/tripeptide 99.8 4.5E-18 9.7E-23 153.7 23.6 338 5-350 54-437 (493)
104 TIGR01272 gluP glucose/galacto 99.8 1.8E-18 4E-23 149.5 20.1 265 44-360 5-298 (310)
105 COG2270 Permeases of the major 99.8 5.9E-18 1.3E-22 144.4 22.2 328 11-381 73-432 (438)
106 PRK10429 melibiose:sodium symp 99.8 9.3E-19 2E-23 161.2 18.6 302 11-352 57-392 (473)
107 PF03825 Nuc_H_symport: Nucleo 99.8 5.6E-18 1.2E-22 150.6 19.6 299 8-352 49-363 (400)
108 COG2211 MelB Na+/melibiose sym 99.8 4.3E-18 9.2E-23 149.9 17.3 301 12-352 64-395 (467)
109 TIGR00788 fbt folate/biopterin 99.8 7.7E-19 1.7E-23 160.6 13.0 318 14-352 78-412 (468)
110 PRK11462 putative transporter; 99.8 1E-17 2.3E-22 153.1 20.2 296 11-352 60-386 (460)
111 PRK09848 glucuronide transport 99.8 1.6E-17 3.5E-22 152.3 17.4 294 10-352 58-387 (448)
112 PF01306 LacY_symp: LacY proto 99.8 5.3E-18 1.2E-22 147.9 11.3 330 9-383 56-406 (412)
113 KOG4686 Predicted sugar transp 99.7 1.3E-17 2.9E-22 133.9 11.0 303 13-352 96-413 (459)
114 COG3104 PTR2 Dipeptide/tripept 99.7 2.6E-16 5.7E-21 137.5 17.3 361 12-374 77-484 (498)
115 PRK10642 proline/glycine betai 99.6 1.3E-15 2.9E-20 141.0 11.8 150 7-156 297-459 (490)
116 KOG2563 Permease of the major 99.6 1.2E-14 2.7E-19 125.0 15.8 329 15-383 98-456 (480)
117 TIGR00880 2_A_01_02 Multidrug 99.6 4.5E-15 9.8E-20 113.3 11.0 130 4-133 6-140 (141)
118 PF03209 PUCC: PUCC protein; 99.6 2.2E-13 4.8E-18 117.1 20.3 300 12-352 30-362 (403)
119 KOG2816 Predicted transporter 99.6 1.8E-13 3.8E-18 123.0 16.6 302 9-352 75-391 (463)
120 PRK10054 putative transporter; 99.5 6.3E-13 1.4E-17 119.7 13.7 155 214-380 28-185 (395)
121 TIGR02332 HpaX 4-hydroxyphenyl 99.5 7.3E-13 1.6E-17 120.0 13.8 178 193-382 7-194 (412)
122 KOG2325 Predicted transporter/ 99.5 2.2E-13 4.8E-18 120.7 9.6 130 6-136 81-234 (488)
123 PRK11663 regulatory protein Uh 99.5 1.3E-12 2.8E-17 119.3 14.2 168 200-379 29-200 (434)
124 PF01770 Folate_carrier: Reduc 99.5 1E-11 2.2E-16 108.3 18.5 315 10-342 55-391 (412)
125 TIGR01299 synapt_SV2 synaptic 99.4 1.4E-12 3E-17 124.1 14.2 179 190-380 163-357 (742)
126 COG2814 AraJ Arabinose efflux 99.4 1.8E-12 3.9E-17 112.4 12.9 172 195-378 14-189 (394)
127 PF03092 BT1: BT1 family; Int 99.4 6.2E-13 1.3E-17 120.3 9.6 318 14-352 42-379 (433)
128 TIGR00895 2A0115 benzoate tran 99.4 1.6E-12 3.5E-17 117.6 12.4 159 210-380 33-195 (398)
129 TIGR00710 efflux_Bcr_CflA drug 99.4 1.9E-12 4.1E-17 116.7 12.8 159 211-381 22-184 (385)
130 PRK03545 putative arabinose tr 99.4 3.1E-12 6.8E-17 115.3 13.9 155 214-380 29-187 (390)
131 TIGR00891 2A0112 putative sial 99.4 3.8E-12 8.2E-17 115.5 14.5 175 193-380 11-191 (405)
132 COG2271 UhpC Sugar phosphate p 99.4 2.8E-12 6E-17 110.0 12.5 179 192-382 27-211 (448)
133 TIGR00893 2A0114 d-galactonate 99.4 2.4E-12 5.1E-17 116.4 12.7 159 211-381 11-173 (399)
134 PRK10213 nepI ribonucleoside t 99.4 4.5E-12 9.8E-17 114.2 13.9 155 214-380 40-198 (394)
135 PF03137 OATP: Organic Anion T 99.4 3.3E-14 7.2E-19 130.9 -0.5 337 7-352 49-513 (539)
136 PRK11551 putative 3-hydroxyphe 99.4 4.4E-12 9.6E-17 115.1 12.3 159 210-380 31-193 (406)
137 PRK10473 multidrug efflux syst 99.4 4.1E-12 9E-17 114.7 11.9 165 205-381 14-182 (392)
138 PF07690 MFS_1: Major Facilita 99.4 4.2E-12 9.1E-17 112.9 11.1 150 211-372 13-167 (352)
139 TIGR00711 efflux_EmrB drug res 99.4 3.2E-12 6.9E-17 118.9 10.4 160 209-380 17-180 (485)
140 KOG1330 Sugar transporter/spin 99.4 1.9E-12 4.2E-17 112.1 8.1 184 195-390 34-222 (493)
141 PRK10489 enterobactin exporter 99.4 2.1E-11 4.5E-16 111.0 15.4 184 184-379 11-198 (417)
142 PRK03699 putative transporter; 99.4 1.7E-11 3.6E-16 110.7 14.5 165 194-370 7-176 (394)
143 PRK11646 multidrug resistance 99.3 1.5E-11 3.3E-16 111.0 13.6 155 213-379 30-187 (400)
144 TIGR00881 2A0104 phosphoglycer 99.3 5.4E-12 1.2E-16 113.4 10.7 159 210-380 11-174 (379)
145 PRK14995 methyl viologen resis 99.3 9.8E-12 2.1E-16 115.5 12.5 174 195-380 7-185 (495)
146 PRK10091 MFS transport protein 99.3 1.2E-11 2.6E-16 111.2 11.9 159 211-381 20-182 (382)
147 PRK12307 putative sialic acid 99.3 2.1E-11 4.6E-16 111.4 13.7 149 201-361 25-177 (426)
148 PRK03893 putative sialic acid 99.3 1.6E-11 3.4E-16 114.6 12.9 151 198-360 24-178 (496)
149 KOG3098 Uncharacterized conser 99.3 4.2E-10 9.1E-15 99.9 21.0 307 7-350 61-411 (461)
150 PRK15403 multidrug efflux syst 99.3 1.9E-11 4.2E-16 110.8 13.0 154 216-381 38-195 (413)
151 PLN00028 nitrate transmembrane 99.3 4.2E-11 9.1E-16 110.6 15.3 155 210-377 52-219 (476)
152 PRK11652 emrD multidrug resist 99.3 2.7E-11 5.8E-16 109.5 13.6 156 214-381 28-187 (394)
153 TIGR00712 glpT glycerol-3-phos 99.3 3.2E-11 6.9E-16 110.5 14.2 160 212-380 45-209 (438)
154 PRK10504 putative transporter; 99.3 2E-11 4.4E-16 113.0 13.0 162 206-379 22-187 (471)
155 PRK05122 major facilitator sup 99.3 1.2E-11 2.5E-16 112.1 10.8 129 6-134 259-391 (399)
156 PRK15402 multidrug efflux syst 99.3 4E-11 8.7E-16 108.8 14.2 159 211-381 30-192 (406)
157 TIGR00900 2A0121 H+ Antiporter 99.3 2.7E-11 5.9E-16 108.2 12.2 151 212-369 17-171 (365)
158 PRK11195 lysophospholipid tran 99.3 4.1E-11 9E-16 107.9 13.3 132 215-361 24-158 (393)
159 PRK15462 dipeptide/tripeptide 99.3 5.3E-11 1.1E-15 108.2 13.3 144 210-364 25-176 (493)
160 PRK09874 drug efflux system pr 99.3 5.8E-11 1.3E-15 107.9 13.6 158 210-380 30-196 (408)
161 PRK09556 uhpT sugar phosphate 99.3 3.5E-11 7.6E-16 111.1 12.2 177 195-378 30-213 (467)
162 PRK11273 glpT sn-glycerol-3-ph 99.3 6E-11 1.3E-15 109.0 13.5 159 213-380 48-211 (452)
163 TIGR00886 2A0108 nitrite extru 99.3 9.3E-11 2E-15 104.9 14.3 131 210-352 17-151 (366)
164 TIGR00889 2A0110 nucleoside tr 99.3 2E-11 4.3E-16 110.8 10.0 126 10-135 265-406 (418)
165 PRK15011 sugar efflux transpor 99.3 5.5E-11 1.2E-15 107.3 12.2 125 8-133 264-392 (393)
166 PRK10207 dipeptide/tripeptide 99.3 8.4E-11 1.8E-15 108.3 13.3 138 214-362 35-179 (489)
167 TIGR00924 yjdL_sub1_fam amino 99.3 8.4E-11 1.8E-15 108.3 13.0 145 209-365 25-180 (475)
168 PRK09528 lacY galactoside perm 99.2 2.2E-11 4.7E-16 111.0 8.8 127 9-135 275-407 (420)
169 PRK11102 bicyclomycin/multidru 99.2 4E-11 8.6E-16 107.7 10.2 154 215-380 12-169 (377)
170 TIGR00897 2A0118 polyol permea 99.2 7.7E-11 1.7E-15 106.7 11.8 132 213-352 32-167 (402)
171 PRK12382 putative transporter; 99.2 3.9E-11 8.4E-16 108.4 9.9 123 7-129 260-386 (392)
172 TIGR00890 2A0111 Oxalate/Forma 99.2 4.3E-11 9.2E-16 107.5 9.8 155 210-377 19-177 (377)
173 PRK11043 putative transporter; 99.2 1.7E-10 3.6E-15 104.6 13.7 144 218-373 30-177 (401)
174 PRK15034 nitrate/nitrite trans 99.2 4.5E-10 9.7E-15 101.1 16.0 145 199-351 39-187 (462)
175 TIGR00903 2A0129 major facilit 99.2 9.5E-11 2.1E-15 104.2 11.5 158 211-381 8-169 (368)
176 cd06174 MFS The Major Facilita 99.2 8.7E-11 1.9E-15 104.3 10.7 124 7-130 222-350 (352)
177 KOG3626 Organic anion transpor 99.2 1.1E-09 2.3E-14 101.8 17.6 244 8-264 144-469 (735)
178 PF05631 DUF791: Protein of un 99.2 1.6E-10 3.5E-15 98.1 11.2 209 9-252 82-304 (354)
179 PRK03633 putative MFS family t 99.2 2.9E-10 6.2E-15 102.3 13.0 133 209-353 21-156 (381)
180 TIGR00894 2A0114euk Na(+)-depe 99.2 9.3E-11 2E-15 108.4 10.1 140 230-379 80-221 (465)
181 TIGR00880 2_A_01_02 Multidrug 99.2 1.3E-10 2.7E-15 88.5 8.8 133 235-379 7-140 (141)
182 PRK10077 xylE D-xylose transpo 99.2 5.7E-10 1.2E-14 103.7 14.5 151 230-381 59-218 (479)
183 PF05977 MFS_3: Transmembrane 99.2 1.7E-10 3.6E-15 106.2 10.6 172 186-368 6-181 (524)
184 TIGR00892 2A0113 monocarboxyla 99.2 3.8E-10 8.3E-15 103.6 12.9 149 211-371 36-188 (455)
185 PRK09584 tppB putative tripept 99.2 3.3E-10 7.2E-15 105.0 12.4 143 210-363 37-187 (500)
186 TIGR00899 2A0120 sugar efflux 99.2 2.7E-10 5.8E-15 102.3 10.9 123 10-133 249-375 (375)
187 PRK09705 cynX putative cyanate 99.1 7.6E-10 1.6E-14 99.8 13.0 130 211-353 26-158 (393)
188 PRK10406 alpha-ketoglutarate t 99.1 1.6E-09 3.5E-14 99.0 15.3 144 203-350 31-183 (432)
189 PRK15075 citrate-proton sympor 99.1 1E-09 2.2E-14 100.4 13.7 152 195-350 16-176 (434)
190 TIGR00879 SP MFS transporter, 99.1 1.8E-10 3.8E-15 107.0 8.8 141 230-380 75-219 (481)
191 PRK06814 acylglycerophosphoeth 99.1 6.5E-10 1.4E-14 114.1 13.5 187 185-380 6-197 (1140)
192 TIGR00885 fucP L-fucose:H+ sym 99.1 1.6E-09 3.4E-14 98.0 13.7 132 211-351 20-154 (410)
193 TIGR00805 oat sodium-independe 99.1 1.4E-09 3E-14 103.3 13.4 156 197-352 36-233 (633)
194 TIGR00887 2A0109 phosphate:H+ 99.1 1.5E-09 3.2E-14 101.2 13.3 116 230-351 60-175 (502)
195 KOG2615 Permease of the major 99.1 1.7E-10 3.7E-15 97.5 6.0 110 230-352 72-181 (451)
196 PRK08633 2-acyl-glycerophospho 99.1 1.4E-09 3.1E-14 111.9 13.4 115 230-353 51-165 (1146)
197 PRK09952 shikimate transporter 99.1 5E-09 1.1E-13 95.9 15.3 111 237-351 75-185 (438)
198 TIGR00898 2A0119 cation transp 99.1 1.1E-09 2.5E-14 102.3 11.1 126 10-135 369-498 (505)
199 PTZ00207 hypothetical protein; 99.0 4.2E-09 9E-14 97.6 13.9 162 210-378 43-206 (591)
200 PF06609 TRI12: Fungal trichot 99.0 1.3E-09 2.9E-14 100.3 10.4 144 214-370 64-210 (599)
201 COG2223 NarK Nitrate/nitrite t 99.0 1.7E-09 3.7E-14 93.3 9.9 166 203-379 23-195 (417)
202 TIGR00806 rfc RFC reduced fola 99.0 7.1E-09 1.5E-13 92.1 13.5 157 210-379 42-204 (511)
203 PRK10133 L-fucose transporter; 99.0 7.4E-09 1.6E-13 94.5 14.2 133 210-351 42-177 (438)
204 PF06963 FPN1: Ferroportin1 (F 99.0 7.1E-07 1.5E-11 79.8 25.8 327 9-346 51-411 (432)
205 TIGR00882 2A0105 oligosacchari 99.0 7.5E-09 1.6E-13 93.6 13.8 160 214-379 23-185 (396)
206 KOG3764 Vesicular amine transp 99.0 7.4E-10 1.6E-14 94.3 5.7 141 230-382 110-252 (464)
207 TIGR00902 2A0127 phenyl propri 99.0 5.1E-09 1.1E-13 94.1 11.4 119 8-128 252-375 (382)
208 TIGR01301 GPH_sucrose GPH fami 99.0 2E-08 4.4E-13 91.1 14.8 183 197-381 8-222 (477)
209 PRK11010 ampG muropeptide tran 99.0 1.1E-08 2.3E-13 94.9 13.1 161 210-380 28-197 (491)
210 TIGR00901 2A0125 AmpG-related 98.9 1E-08 2.2E-13 91.4 12.1 159 212-380 6-181 (356)
211 TIGR00896 CynX cyanate transpo 98.9 7.6E-09 1.6E-13 92.1 10.5 129 211-353 17-148 (355)
212 KOG0253 Synaptic vesicle trans 98.9 1E-08 2.3E-13 86.6 8.9 124 12-135 397-522 (528)
213 PRK11902 ampG muropeptide tran 98.9 3.5E-08 7.6E-13 89.4 12.8 165 206-380 11-184 (402)
214 TIGR00883 2A0106 metabolite-pr 98.9 3.5E-08 7.6E-13 89.1 12.6 110 238-351 47-156 (394)
215 TIGR00792 gph sugar (Glycoside 98.8 1.2E-08 2.6E-13 93.6 9.0 103 6-108 267-377 (437)
216 PF11700 ATG22: Vacuole efflux 98.8 4.7E-08 1E-12 89.2 11.6 126 9-134 330-470 (477)
217 TIGR00926 2A1704 Peptide:H+ sy 98.8 1.3E-06 2.8E-11 82.8 21.4 118 11-128 38-178 (654)
218 KOG0255 Synaptic vesicle trans 98.8 2.5E-08 5.5E-13 93.6 10.0 136 230-380 122-257 (521)
219 PRK11128 putative 3-phenylprop 98.8 1.5E-07 3.2E-12 84.7 13.7 144 211-367 21-169 (382)
220 PF06813 Nodulin-like: Nodulin 98.8 6.9E-08 1.5E-12 79.5 10.4 160 207-373 15-177 (250)
221 KOG0569 Permease of the major 98.8 8.9E-08 1.9E-12 86.2 11.6 143 230-381 64-208 (485)
222 PRK09848 glucuronide transport 98.8 1.8E-07 3.9E-12 86.1 13.9 101 8-108 276-385 (448)
223 PF02487 CLN3: CLN3 protein; 98.8 3.9E-07 8.4E-12 80.0 15.0 114 15-133 78-197 (402)
224 COG3104 PTR2 Dipeptide/tripept 98.7 2.5E-08 5.3E-13 88.3 7.3 143 226-378 58-206 (498)
225 TIGR02718 sider_RhtX_FptX side 98.7 1.5E-07 3.3E-12 85.0 11.8 120 8-127 256-386 (390)
226 KOG2532 Permease of the major 98.7 5.2E-08 1.1E-12 88.4 7.9 141 230-380 77-219 (466)
227 KOG2533 Permease of the major 98.7 2.5E-07 5.5E-12 84.3 12.1 141 230-382 85-232 (495)
228 KOG0254 Predicted transporter 98.7 1.4E-07 2.9E-12 88.3 9.9 139 229-381 92-233 (513)
229 KOG0637 Sucrose transporter an 98.7 1.6E-07 3.6E-12 81.8 9.5 102 12-113 83-207 (498)
230 COG2270 Permeases of the major 98.6 1.2E-07 2.5E-12 82.2 7.6 125 10-134 302-431 (438)
231 KOG3810 Micronutrient transpor 98.6 1E-06 2.3E-11 74.0 12.2 315 10-346 56-381 (433)
232 TIGR00769 AAA ADP/ATP carrier 98.6 6E-05 1.3E-09 68.5 24.0 96 13-108 61-188 (472)
233 COG0477 ProP Permeases of the 98.6 4.2E-07 9E-12 79.1 9.7 116 7-122 50-175 (338)
234 PRK10429 melibiose:sodium symp 98.6 1.1E-06 2.3E-11 81.5 12.7 101 8-108 278-390 (473)
235 PF13347 MFS_2: MFS/sugar tran 98.6 7.3E-07 1.6E-11 81.5 11.5 105 4-108 268-381 (428)
236 COG0738 FucP Fucose permease [ 98.5 1.5E-06 3.2E-11 75.0 12.3 131 213-352 32-165 (422)
237 PRK09669 putative symporter Ya 98.5 8.2E-07 1.8E-11 81.6 11.7 101 8-108 276-385 (444)
238 PF00083 Sugar_tr: Sugar (and 98.5 1.8E-09 3.9E-14 99.5 -6.0 142 230-380 50-194 (451)
239 PF01306 LacY_symp: LacY proto 98.5 1.6E-07 3.4E-12 82.9 6.3 173 189-372 6-183 (412)
240 KOG4332 Predicted sugar transp 98.5 1.1E-06 2.3E-11 71.4 10.4 284 10-334 86-387 (454)
241 PF13000 Acatn: Acetyl-coenzym 98.5 1.5E-05 3.2E-10 70.9 17.2 55 54-108 123-177 (544)
242 KOG2504 Monocarboxylate transp 98.5 6.3E-07 1.4E-11 82.5 8.8 174 193-378 45-222 (509)
243 PF03825 Nuc_H_symport: Nucleo 98.5 2.3E-06 4.9E-11 76.8 11.7 120 15-134 262-398 (400)
244 PF06813 Nodulin-like: Nodulin 98.5 1.8E-06 4E-11 71.2 10.1 121 14-135 54-185 (250)
245 TIGR01272 gluP glucose/galacto 98.4 1.5E-06 3.3E-11 75.5 9.1 113 3-118 185-301 (310)
246 KOG0252 Inorganic phosphate tr 98.4 6.2E-07 1.3E-11 78.4 5.7 113 230-347 88-200 (538)
247 PF00854 PTR2: POT family; In 98.4 5E-05 1.1E-09 68.0 18.3 104 27-130 2-121 (372)
248 KOG3574 Acetyl-CoA transporter 98.4 1.4E-05 3.1E-10 68.3 13.4 91 15-105 82-189 (510)
249 KOG3762 Predicted transporter 98.4 3.4E-06 7.3E-11 75.4 9.9 145 215-371 392-541 (618)
250 COG2211 MelB Na+/melibiose sym 98.4 1.1E-05 2.4E-10 72.3 13.3 105 4-108 280-393 (467)
251 KOG1237 H+/oligopeptide sympor 98.3 5.8E-05 1.3E-09 70.4 17.6 124 5-128 82-241 (571)
252 KOG2325 Predicted transporter/ 98.3 1.9E-06 4.1E-11 77.3 7.5 144 230-381 75-233 (488)
253 PF05978 UNC-93: Ion channel r 98.3 5.4E-06 1.2E-10 63.0 8.3 100 7-107 48-147 (156)
254 KOG2816 Predicted transporter 98.3 9.5E-06 2E-10 73.6 10.9 137 235-386 71-208 (463)
255 TIGR00788 fbt folate/biopterin 98.2 2.9E-06 6.3E-11 78.2 7.7 102 7-108 299-410 (468)
256 PF07672 MFS_Mycoplasma: Mycop 98.2 3.2E-05 6.9E-10 63.0 11.4 239 80-349 1-264 (267)
257 PRK11462 putative transporter; 98.1 3.7E-05 7.9E-10 70.9 11.9 102 7-108 274-384 (460)
258 KOG3762 Predicted transporter 98.1 5E-06 1.1E-10 74.3 5.9 123 6-128 416-543 (618)
259 PF05631 DUF791: Protein of un 98.0 0.00014 3E-09 62.6 13.1 153 217-382 57-221 (354)
260 TIGR00939 2a57 Equilibrative N 98.0 4.9E-05 1.1E-09 68.8 10.4 47 301-347 382-428 (437)
261 KOG4686 Predicted sugar transp 97.9 5.4E-05 1.2E-09 62.3 7.2 122 8-131 312-442 (459)
262 COG2807 CynX Cyanate permease 97.8 0.00034 7.3E-09 60.0 11.8 149 209-371 27-180 (395)
263 PF03209 PUCC: PUCC protein; 97.8 0.00038 8.3E-09 61.0 11.8 123 6-128 254-394 (403)
264 PF03219 TLC: TLC ATP/ADP tran 97.7 0.0053 1.1E-07 56.4 18.2 95 14-108 77-203 (491)
265 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.00064 1.4E-08 64.9 12.4 134 215-352 9-149 (654)
266 KOG2563 Permease of the major 97.5 0.00056 1.2E-08 60.4 9.0 117 230-352 83-201 (480)
267 PF03092 BT1: BT1 family; Int 97.5 0.00054 1.2E-08 62.5 9.1 153 218-379 14-177 (433)
268 COG3202 ATP/ADP translocase [E 97.5 0.062 1.4E-06 48.5 20.8 98 11-108 77-207 (509)
269 PF01733 Nucleoside_tran: Nucl 97.5 2.6E-05 5.6E-10 67.6 0.0 117 230-347 186-304 (309)
270 PF05978 UNC-93: Ion channel r 97.4 0.0054 1.2E-07 46.8 12.0 109 230-351 41-149 (156)
271 KOG1479 Nucleoside transporter 97.1 0.0091 2E-07 52.6 11.3 84 48-136 116-208 (406)
272 PF12832 MFS_1_like: MFS_1 lik 97.0 0.0024 5.3E-08 42.2 5.3 54 209-262 15-71 (77)
273 TIGR00769 AAA ADP/ATP carrier 96.7 0.042 9.2E-07 50.3 12.5 110 243-352 61-190 (472)
274 KOG3626 Organic anion transpor 96.6 0.023 5.1E-07 54.1 10.8 159 194-352 97-298 (735)
275 PF03137 OATP: Organic Anion T 96.6 0.00037 8E-09 65.1 -1.0 143 209-351 18-201 (539)
276 COG0477 ProP Permeases of the 96.2 0.079 1.7E-06 45.6 11.5 114 230-353 43-158 (338)
277 PF01770 Folate_carrier: Reduc 96.2 0.074 1.6E-06 47.5 10.8 130 210-352 20-154 (412)
278 PRK03612 spermidine synthase; 96.1 0.052 1.1E-06 50.8 10.3 69 302-371 121-191 (521)
279 PF06963 FPN1: Ferroportin1 (F 95.9 0.14 3.1E-06 46.4 11.4 141 230-371 42-194 (432)
280 KOG3098 Uncharacterized conser 95.8 0.07 1.5E-06 48.5 9.3 92 16-108 299-411 (461)
281 KOG2881 Predicted membrane pro 95.7 0.61 1.3E-05 38.1 12.9 33 237-269 251-283 (294)
282 PF02487 CLN3: CLN3 protein; 95.3 0.045 9.8E-07 48.7 6.0 65 44-108 330-394 (402)
283 PF00854 PTR2: POT family; In 95.1 0.027 5.8E-07 50.6 4.2 113 258-374 3-119 (372)
284 PRK03612 spermidine synthase; 94.8 0.21 4.6E-06 46.8 9.3 55 53-108 114-168 (521)
285 KOG0637 Sucrose transporter an 94.6 0.036 7.7E-07 49.5 3.6 155 193-349 32-201 (498)
286 KOG3880 Predicted small molecu 94.2 0.063 1.4E-06 45.4 3.9 110 17-131 83-198 (409)
287 PF12832 MFS_1_like: MFS_1 lik 93.9 0.062 1.3E-06 35.5 2.7 29 8-36 47-75 (77)
288 PF06779 DUF1228: Protein of u 93.6 0.17 3.7E-06 33.9 4.4 49 5-53 36-84 (85)
289 KOG3574 Acetyl-CoA transporter 93.5 0.6 1.3E-05 41.1 8.5 130 216-347 52-189 (510)
290 KOG3097 Predicted membrane pro 92.7 6.2 0.00013 34.3 14.6 72 7-79 69-140 (390)
291 PF06779 DUF1228: Protein of u 92.5 0.51 1.1E-05 31.7 5.4 64 213-276 11-77 (85)
292 KOG1479 Nucleoside transporter 92.4 1.7 3.6E-05 38.9 10.0 85 292-378 118-204 (406)
293 PF03219 TLC: TLC ATP/ADP tran 90.5 8.5 0.00018 35.9 13.0 115 238-352 71-205 (491)
294 KOG1237 H+/oligopeptide sympor 90.4 6.6 0.00014 37.4 12.5 121 232-352 79-219 (571)
295 COG5336 Uncharacterized protei 88.2 0.73 1.6E-05 31.9 3.3 28 5-33 52-80 (116)
296 PRK15015 carbon starvation pro 84.5 35 0.00076 32.8 13.0 36 75-111 78-114 (701)
297 KOG3880 Predicted small molecu 84.4 2.2 4.7E-05 36.6 4.9 75 34-108 327-401 (409)
298 KOG4332 Predicted sugar transp 79.8 4.2 9E-05 34.2 4.9 27 239-265 85-111 (454)
299 PF07672 MFS_Mycoplasma: Mycop 79.2 3.9 8.5E-05 34.1 4.6 97 3-100 148-254 (267)
300 KOG2601 Iron transporter [Inor 77.9 9.6 0.00021 33.8 6.6 37 310-346 405-441 (503)
301 COG3202 ATP/ADP translocase [E 76.9 64 0.0014 30.0 11.9 115 238-352 74-209 (509)
302 COG4262 Predicted spermidine s 73.4 23 0.0005 31.2 7.7 60 291-352 105-164 (508)
303 PF13000 Acatn: Acetyl-coenzym 71.4 30 0.00065 32.2 8.4 38 313-350 140-177 (544)
304 PF11947 DUF3464: Protein of u 70.8 28 0.00061 26.4 6.9 81 18-101 56-146 (153)
305 PF02990 EMP70: Endomembrane p 70.4 56 0.0012 31.0 10.5 26 232-257 303-328 (521)
306 PF06912 DUF1275: Protein of u 68.7 61 0.0013 26.2 10.9 26 85-110 166-191 (209)
307 PRK10697 DNA-binding transcrip 66.5 8.6 0.00019 27.7 3.3 13 125-137 57-69 (118)
308 PF11947 DUF3464: Protein of u 65.8 12 0.00025 28.5 4.0 36 307-342 110-145 (153)
309 TIGR00939 2a57 Equilibrative N 64.2 27 0.00059 32.2 6.9 61 47-107 370-430 (437)
310 COG5336 Uncharacterized protei 53.7 64 0.0014 22.7 5.5 31 322-352 37-67 (116)
311 PF01733 Nucleoside_tran: Nucl 51.6 4 8.7E-05 35.5 -0.5 60 47-106 246-305 (309)
312 COG3462 Predicted membrane pro 50.1 88 0.0019 22.0 6.0 21 145-165 88-108 (117)
313 PF07857 DUF1632: CEO family ( 47.3 64 0.0014 27.1 5.8 24 110-133 114-137 (254)
314 KOG3810 Micronutrient transpor 46.3 65 0.0014 28.6 5.8 41 312-352 115-155 (433)
315 KOG0055 Multidrug/pheromone ex 41.1 4.8E+02 0.01 27.9 13.7 33 94-126 791-824 (1228)
316 PF06027 DUF914: Eukaryotic pr 40.8 2.6E+02 0.0056 24.8 9.7 22 357-378 286-307 (334)
317 TIGR02978 phageshock_pspC phag 40.0 37 0.0008 24.7 3.0 28 110-137 31-64 (121)
318 PF11151 DUF2929: Protein of u 39.3 92 0.002 19.1 4.7 41 95-135 12-56 (57)
319 PF08997 UCR_6-4kD: Ubiquinol- 36.4 77 0.0017 19.3 3.4 39 75-113 3-41 (56)
320 COG1422 Predicted membrane pro 35.1 2.4E+02 0.0052 22.7 13.8 62 96-158 33-95 (201)
321 PF10785 NADH-u_ox-rdase: NADH 35.1 85 0.0018 21.2 3.9 44 6-49 28-78 (86)
322 COG1268 BioY Uncharacterized c 33.3 1.2E+02 0.0025 24.1 5.0 21 5-25 91-111 (184)
323 PF07760 DUF1616: Protein of u 33.1 3.2E+02 0.0069 23.6 9.2 56 52-108 22-77 (287)
324 PRK14220 camphor resistance pr 30.2 2E+02 0.0043 21.0 5.4 47 33-79 39-85 (120)
325 KOG2601 Iron transporter [Inor 30.1 1E+02 0.0022 27.8 4.5 27 327-353 175-201 (503)
326 PF02632 BioY: BioY family; I 29.9 1.3E+02 0.0028 22.9 4.6 23 5-27 62-84 (148)
327 PF04281 Tom22: Mitochondrial 29.9 1.7E+02 0.0036 22.0 5.0 26 74-99 60-85 (137)
328 PRK14218 camphor resistance pr 29.9 2.4E+02 0.0051 21.0 6.4 25 55-79 71-95 (133)
329 PF06645 SPC12: Microsomal sig 29.9 1.7E+02 0.0036 19.3 5.6 63 19-81 8-70 (76)
330 PF11299 DUF3100: Protein of u 29.7 40 0.00087 27.6 2.0 54 54-108 176-229 (241)
331 COG1288 Predicted membrane pro 28.8 2.5E+02 0.0055 25.8 6.7 17 109-125 217-233 (481)
332 COG2076 EmrE Membrane transpor 26.8 85 0.0018 22.2 2.9 61 16-76 20-81 (106)
333 PF12670 DUF3792: Protein of u 26.7 2.5E+02 0.0054 20.2 10.8 46 221-266 29-74 (116)
334 PRK14200 camphor resistance pr 25.8 2.6E+02 0.0057 20.6 5.5 25 55-79 68-92 (127)
335 PRK13629 threonine/serine tran 25.7 5.5E+02 0.012 23.9 13.7 41 78-119 17-57 (443)
336 PF15061 DUF4538: Domain of un 25.7 1.5E+02 0.0032 18.3 3.4 21 109-129 4-24 (58)
337 COG4769 Predicted membrane pro 25.7 67 0.0015 24.7 2.4 40 16-61 93-132 (181)
338 PRK02237 hypothetical protein; 25.5 87 0.0019 22.1 2.7 43 4-46 64-106 (109)
339 PF13829 DUF4191: Domain of un 25.5 2.5E+02 0.0055 23.1 5.7 70 87-156 27-99 (224)
340 PF02694 UPF0060: Uncharacteri 24.5 65 0.0014 22.7 2.0 42 4-45 62-103 (107)
341 PF04346 EutH: Ethanolamine ut 24.3 5.2E+02 0.011 23.1 11.9 100 14-114 64-169 (354)
342 PF09605 Trep_Strep: Hypotheti 24.1 3.6E+02 0.0078 21.4 6.4 26 232-257 158-183 (186)
343 PF01988 VIT1: VIT family; In 24.0 4E+02 0.0086 21.7 14.4 30 233-262 164-193 (213)
344 PRK11588 hypothetical protein; 24.0 3.4E+02 0.0073 25.7 7.0 37 16-52 136-174 (506)
345 TIGR00267 conserved hypothetic 24.0 3.5E+02 0.0076 21.1 10.9 28 236-263 123-150 (169)
346 TIGR00986 3a0801s05tom22 mitoc 23.9 1.8E+02 0.004 21.8 4.3 24 74-97 58-81 (145)
347 TIGR02230 ATPase_gene1 F0F1-AT 23.4 2.7E+02 0.0058 19.5 6.7 19 90-108 48-66 (100)
348 PRK14232 camphor resistance pr 22.4 2.9E+02 0.0062 20.1 5.1 48 32-79 36-83 (120)
349 PF04024 PspC: PspC domain; I 22.3 1.5E+02 0.0033 18.4 3.2 27 109-135 30-60 (61)
350 PRK14233 camphor resistance pr 22.3 3.3E+02 0.0071 20.3 5.5 25 55-79 69-93 (133)
351 PF04341 DUF485: Protein of un 22.1 2.7E+02 0.0058 19.0 6.8 36 209-244 31-67 (91)
352 PRK09609 hypothetical protein; 21.4 5.6E+02 0.012 22.4 13.8 16 91-106 49-64 (312)
353 TIGR00930 2a30 K-Cl cotranspor 21.1 7.3E+02 0.016 26.0 9.3 24 96-119 505-528 (953)
354 KOG3097 Predicted membrane pro 20.5 5.7E+02 0.012 22.9 7.1 26 236-261 68-93 (390)
355 KOG3312 Predicted membrane pro 20.3 3.9E+02 0.0084 20.2 5.6 31 128-158 27-57 (186)
356 KOG1277 Endosomal membrane pro 20.0 7.2E+02 0.016 23.2 8.1 16 236-251 333-348 (593)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=318.95 Aligned_cols=389 Identities=30% Similarity=0.509 Sum_probs=333.2
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh---hchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.|..|.++|+++.|.++||+|||..+.++.++..++.++..+ .+++++++++|++.|+..|........|+.|..|+
T Consensus 68 ~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~ 147 (485)
T KOG0569|consen 68 IFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPK 147 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChh
Confidence 456677888888999999999999999999988888777765 47899999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhh-cCChHHHHHHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESPRWLAK-TGKGIESEAALQR 153 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~-~~~~~~~~~~~~~ 153 (396)
+.||......+.+..+|..++..++.-- .|++.+.+..+++++.++...++||||||+.. +++++||++.++.
T Consensus 148 ~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~ 227 (485)
T KOG0569|consen 148 NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKF 227 (485)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999997766432 69999999999999999999999999999988 8999999999999
Q ss_pred HhCCCcchHHHHHHHHHHHHHH-hhccchhHHHhhhhhh-hhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch--
Q 016055 154 LRGADADISEEAAEIREYTETL-ERLSEGGILELFQRKY-AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS-- 229 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (396)
.++.+++.++..++.++.++++ +++++.+++|+++++. ++...+.+.+....++.+.+...+|...++.+.|++..
T Consensus 228 y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a 307 (485)
T KOG0569|consen 228 YRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEA 307 (485)
T ss_pred HhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHH
Confidence 9988765544444333333332 2336778999999854 44566777788888999999999999999999998776
Q ss_pred -hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055 230 -IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM 308 (396)
Q Consensus 230 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
..+...++...+.++++.++.||.|||++++.+..++.+..+++.......+... ++..+..+...+.+...+..|.
T Consensus 308 ~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~ 385 (485)
T KOG0569|consen 308 QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGP 385 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCC
Confidence 7777888999999999999999999999999999999988888887665554331 2334556777888888899999
Q ss_pred cchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCCCCCChHHH
Q 016055 309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEI 388 (396)
Q Consensus 309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (396)
.|+.+.+.+|++|++.|+.++++....+++..++-...+..+.+.-+...++.+.+.+.+..+..++.+||||+|+..|+
T Consensus 386 gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI 465 (485)
T KOG0569|consen 386 GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEI 465 (485)
T ss_pred CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHH
Confidence 99999999999999999999999999999999999999999999555588889999999999999999999999999888
Q ss_pred HhhcCC
Q 016055 389 QASMNP 394 (396)
Q Consensus 389 ~~~~~~ 394 (396)
.++.++
T Consensus 466 ~~~~~~ 471 (485)
T KOG0569|consen 466 IEELEK 471 (485)
T ss_pred HHHHHh
Confidence 777654
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.4e-40 Score=307.98 Aligned_cols=374 Identities=21% Similarity=0.295 Sum_probs=263.5
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
+..+.+++.+++|+++||+|||+++..+.++..++.++++++++ ++.++++|+++|++.|...+....++.|++
T Consensus 65 ~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~ 144 (502)
T TIGR00887 65 ASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFA 144 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Confidence 44567788888999999999999999999999999999988776 789999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhhh---------------------------hHHHHHHHhhHHHHHHHHHHhcc
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAFL---------------------------NWRILALIGTIPCLVQLIGLCFI 131 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l---------------------------~wr~~f~~~~~~~~~~~~~~~~~ 131 (396)
|+++|++++++.+....+|.++++.++..+ +||+++.+.++++++..+..+++
T Consensus 145 p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 224 (502)
T TIGR00887 145 TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTI 224 (502)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999998888776432 59999999998888888888899
Q ss_pred CCChhHHhhcCChH-HHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHhhccchhHHHhhhhhh---hhHHHHHHHHHHHHH
Q 016055 132 PESPRWLAKTGKGI-ESEAALQRLRGADAD-ISEEAAEIREYTETLERLSEGGILELFQRKY---AHSLIVGVGLMVLQQ 206 (396)
Q Consensus 132 ~e~p~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 206 (396)
||||||+..+++++ ++.+.+++..+.+.+ ..++.++.+ ++++..+.+++++++++. .++..+.....++..
T Consensus 225 pESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 300 (502)
T TIGR00887 225 PETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKAS----TAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLL 300 (502)
T ss_pred CCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchh----ccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99999998887764 456556555432211 111111100 011112235777775421 212222222222222
Q ss_pred hcchhhhHHhHHHHHHHcCCCchh---------------HHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHH
Q 016055 207 FGGVNGIAFYASSIFISAGFSGSI---------------GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCL 271 (396)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 271 (396)
...++....+.|.++++.|.+... ......++.+++.++.+++.||+|||+.+..+..+..++..
T Consensus 301 ~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~ 380 (502)
T TIGR00887 301 DIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFF 380 (502)
T ss_pred HHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHH
Confidence 223345566678877777765320 12333456677888999999999999988777766666655
Q ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 272 LAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
++..... . ................+..+..+..+.+..|.+|++.|+++.|+.+..++++++++|.+.+.+.
T Consensus 381 ~l~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~ 452 (502)
T TIGR00887 381 VLGFAYN--H------LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLA 452 (502)
T ss_pred HHHHHHH--h------cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhh
Confidence 5544211 0 0011111222222233345566777888999999999999999999999999999999999998
Q ss_pred Hhc-----------ccchhHHHHHHHHhhHhheeeecCCCCCCChHHHHhh
Q 016055 352 KWS-----------STGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQAS 391 (396)
Q Consensus 352 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (396)
+.. ....+++++++.++..+. .+++||+++++.+|+++|
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 453 QHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELSGE 502 (502)
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhhCC
Confidence 732 123456666666555444 467799999988776553
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.9e-41 Score=313.86 Aligned_cols=367 Identities=19% Similarity=0.260 Sum_probs=274.1
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..|.+++.+++|+++||+|||+++++++++.++++++++++++++.++++|++.|++.++..+...+++.|++|+++|
T Consensus 210 ~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~R 289 (742)
T TIGR01299 210 IVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKR 289 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-----------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-----------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-----------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~ 146 (396)
++.+++...++.+|.++++.++..+ +||+.+++.++++++.++..+++||||+|+..+++.++
T Consensus 290 g~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~e 369 (742)
T TIGR01299 290 GEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDE 369 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHH
Confidence 9999999999999999988765432 59999999988888888888889999999999999999
Q ss_pred HHHHHHHHhCCCcch---HHHH---HHHHHHHHH------Hhhcc-----------------chhHHHhhhhhhhhHHHH
Q 016055 147 SEAALQRLRGADADI---SEEA---AEIREYTET------LERLS-----------------EGGILELFQRKYAHSLIV 197 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~------~~~~~-----------------~~~~~~~~~~~~~~~~~~ 197 (396)
+.+.+++++..+... +.+. ++.+..... +++.. ..+++++++++..++.++
T Consensus 370 A~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~ 449 (742)
T TIGR01299 370 AWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK 449 (742)
T ss_pred HHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH
Confidence 999999987665321 1110 000000000 00000 013556676555555555
Q ss_pred HHHHHHHHHhcchhhhHHhHHHHHHHc------------------------------------------CC---------
Q 016055 198 GVGLMVLQQFGGVNGIAFYASSIFISA------------------------------------------GF--------- 226 (396)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~--------- 226 (396)
. .+.++.....++.+..|.|.+++.. ++
T Consensus 450 l-~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (742)
T TIGR01299 450 L-MGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFED 528 (742)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhccccccccccc
Confidence 4 4444555556788888888764331 00
Q ss_pred -------------------------------------------------------------C------chhHHHHHHHHH
Q 016055 227 -------------------------------------------------------------S------GSIGMIAMVVIQ 239 (396)
Q Consensus 227 -------------------------------------------------------------~------~~~~~~~~~~~~ 239 (396)
+ ......+.+++.
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~ 608 (742)
T TIGR01299 529 SLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAV 608 (742)
T ss_pred ccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHH
Confidence 0 001234555788
Q ss_pred HHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhccc
Q 016055 240 IPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEV 319 (396)
Q Consensus 240 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (396)
+++.++.++++||+|||+++..+.++.+++++++.+. .+... ++...++.+++..+..+....+++|.
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-----------~s~~~-ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-----------NSESA-MIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----------ccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888877777666542 22222 23333344444555667778999999
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCCCCCC
Q 016055 320 FPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRT 384 (396)
Q Consensus 320 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (396)
+|++.|++++|+.+...++|.+++|++.+.+.+.+...++++.+++.++.+++ ..++||++++.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll-~~~LPET~~~~ 740 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLL-ALKLPDTRGQV 740 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhCCCCcccc
Confidence 99999999999999999999999999999888765555566666655554444 44568887764
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1e-38 Score=295.54 Aligned_cols=389 Identities=35% Similarity=0.568 Sum_probs=325.4
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
..|.+++.++.|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|......+.+++|..|++.||.
T Consensus 99 ~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~ 178 (513)
T KOG0254|consen 99 NLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGT 178 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHH
Confidence 44567777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhC-CCc
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRG-ADA 159 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~-~~~ 159 (396)
..+..+....+|..++..++... +||..+.+..+++++..+..+++||+|+|+.++++.+++++.++++++ .++
T Consensus 179 l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~ 258 (513)
T KOG0254|consen 179 LVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPE 258 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCc
Confidence 99999999999999998877777 599999999999988887788899999999999999999999999988 344
Q ss_pred chHHHHHHHHHHHH-HHh-hccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCc--hhHHHHH
Q 016055 160 DISEEAAEIREYTE-TLE-RLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSG--SIGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 235 (396)
+.+.+.++.+.... ... ...+..+.+++++...++..+...+..++++++.+...+|.+.+++..+.+. .......
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~ 338 (513)
T KOG0254|consen 259 DVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIIL 338 (513)
T ss_pred chHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHH
Confidence 55555544442111 111 1222246777766677778888999999999999999999999999988775 4666677
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhh-cccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ-WIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
++...++..++..+.||+|||+.++.+...+.++.++++.......... ......+..+...+++...+..+..|+.+.
T Consensus 339 ~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~ 418 (513)
T KOG0254|consen 339 GVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWV 418 (513)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhh
Confidence 7888889999999999999999999999999999998887665543321 122445677777888888889999999999
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcc-cchhHHHHHHHHhhHh-heeeecCCCCCCChHHHHhhc
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSS-TGTFFAFSAICSLTVL-FVAKLVPETKGRTLEEIQASM 392 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (396)
+.+|.+|.+.|+.+.++....+++...+-........+... ...+..+..++.+... ...+.+||+++++.+|+++.+
T Consensus 419 ~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 419 IVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred hhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 99999999999999999999999888877777766666443 6677777777777777 788899999999999988765
Q ss_pred CC
Q 016055 393 NP 394 (396)
Q Consensus 393 ~~ 394 (396)
++
T Consensus 499 ~~ 500 (513)
T KOG0254|consen 499 EE 500 (513)
T ss_pred Hc
Confidence 43
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.3e-39 Score=301.29 Aligned_cols=368 Identities=21% Similarity=0.272 Sum_probs=275.6
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..|.+++.++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.+...+...+++.|++|+++|
T Consensus 135 ~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r 214 (505)
T TIGR00898 135 CFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQR 214 (505)
T ss_pred HHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhh
Confidence 45678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADIS 162 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
+++.++...+..+|.++++.++..+ +||+.|++.+++.++..+..+++||+|+|+..+++.+++.+.+++..+.+....
T Consensus 215 ~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~ 294 (505)
T TIGR00898 215 AIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKL 294 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999998877 899999999988887777778899999999999999998888777654432211
Q ss_pred -HHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHHHHHHHH
Q 016055 163 -EEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVIQIP 241 (396)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (396)
++..+.....+..++.++.+.+++++++..+...+.....++.....++. .+......+.+........++..++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~ 370 (505)
T TIGR00898 295 PAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG----LVLDLGNLGGNIYLDLFISGLVELP 370 (505)
T ss_pred CHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH----HhccccccCCChHHHHHHHHHHHHH
Confidence 11111111111111222357788888877777666555544433222222 2222333455555666677788899
Q ss_pred HhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCC
Q 016055 242 MTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFP 321 (396)
Q Consensus 242 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 321 (396)
+.++.+++.||+|||+.+..+.++.+++.+++.... ...........++..++.....+..+.+..|.+|
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP----------VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC----------CCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999998888777777666555420 1111222222333333344445667789999999
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCCCCCChHH
Q 016055 322 INMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEE 387 (396)
Q Consensus 322 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (396)
++.|++++|+.+....+|++++|.+.+ +.+.+...++.+++++..+.+++ .+++||+++++.+|
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~~~l~~ 504 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGIL-TLFLPETKGVPLPE 504 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHH-HHcCcCCCCCCCCC
Confidence 999999999999999999999999998 66666666677777666665554 34678888876543
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=4.5e-38 Score=291.11 Aligned_cols=378 Identities=29% Similarity=0.526 Sum_probs=269.4
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh------------chhhHHHHHHHHHHhhhhhcccccc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS------------KAAWWLDLGRLLVGYGMGLLSYVVP 71 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~ 71 (396)
.+..+.+++.+++|+++||+|||+++..+.++..++.+.++++ ++++.+++.|+++|++.|...+...
T Consensus 63 ~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~ 142 (479)
T PRK10077 63 SALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSP 142 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHH
Confidence 3556778888999999999999999999999999998888763 2356788999999999999999999
Q ss_pred eeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHh
Q 016055 72 VYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCLVQLIGLCFIPESPRWLA 139 (396)
Q Consensus 72 ~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 139 (396)
++++|++|+++|++++++.+.+..+|.++++.++..+ +||+.|++.+++.++..+..+++||+|+|+.
T Consensus 143 ~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~ 222 (479)
T PRK10077 143 MYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLM 222 (479)
T ss_pred HHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 9999999999999999999999999999988765432 7999999988887777767778999999988
Q ss_pred hcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHH
Q 016055 140 KTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASS 219 (396)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (396)
.+++.+++++..++..+.+. .++..++.++..+. ++...+..+. ..............+......+...++.|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 296 (479)
T PRK10077 223 SRGKQEQAEGILRKIMGNTL-ATQALQEIKHSLDH----GRKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPE 296 (479)
T ss_pred HcCCHHHHHHHHHHHcCChh-HHHHHHHHHHHHHH----hhhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 88887777666665543321 11111111111100 0000011111 111112222222333334445566677888
Q ss_pred HHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHH
Q 016055 220 IFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVG 296 (396)
Q Consensus 220 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (396)
+.++.+.+.. ......++..+++.++.++++||+|||+.+..+..+.+++.+.+....... .........
T Consensus 297 i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~-------~~~~~~~~~ 369 (479)
T PRK10077 297 IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-------APGIVALLS 369 (479)
T ss_pred HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC-------cccHHHHHH
Confidence 8888777644 444556778889999999999999999999888888777776665432100 112223333
Q ss_pred HHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH------H-hcccchhHHHHHHHHhh
Q 016055 297 VLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM------K-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~------~-~~~~~~~~~~~~~~~~~ 369 (396)
..++...+.....|..+.++.|.+|++.|+++.|+.+...+++.++++.+.+.+. + .+....+++.++...+.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLA 449 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHH
Confidence 3333344444455777899999999999999999999999999999988877655 2 44555667777666666
Q ss_pred HhheeeecCCCCCCChHHHHhhcCC
Q 016055 370 VLFVAKLVPETKGRTLEEIQASMNP 394 (396)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (396)
.++.+++.||+|+++.+|.++++++
T Consensus 450 ~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 450 ALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred HHHHHhccccCCCCCHHHHHHHHhh
Confidence 6666677899999988887776554
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=9.3e-45 Score=333.00 Aligned_cols=385 Identities=34% Similarity=0.618 Sum_probs=302.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK---AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.+..|.++|++++|.++||+|||+.+..+.++..+++++.++++ |++.+.++|+++|++.|...+....++.|..|+
T Consensus 54 ~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~ 133 (451)
T PF00083_consen 54 SFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPP 133 (451)
T ss_pred HHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34567778888899999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh----h---HHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL----N---WRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~---wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
++|++..++.+.++.+|.+++..++... + ||+.+.+..+++++..+...++||||+|+..++|.||+++.+++
T Consensus 134 ~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~ 213 (451)
T PF00083_consen 134 KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRK 213 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccccccccccccc
Confidence 9999999999999999999888776544 4 99999999999888888888999999999999999999999888
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhh-hhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch-hH
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGGILELFQRKY-AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS-IG 231 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (396)
.++.+.+.++.. +..+..++ .++++.+++++++++. .++....+.+.......+.+...+|.+.+.++.+.+.. ..
T Consensus 214 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 291 (451)
T PF00083_consen 214 LRGKEIEDEEIE-EIKAEKKE-SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLA 291 (451)
T ss_pred cccccccccccc-cccccccc-ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 655532222222 11111111 1111256777777654 45556666666666666667778888888888877776 55
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccch
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGI 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
.....+...++.++...+.||+|||+.+..+....+++...+........... +......+....+....+..+..+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~l~~~~~~~g~~~~ 369 (451)
T PF00083_consen 292 TLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSS--SWWSILSIVFLALFFAFFSLGWGPL 369 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccceeeeecccccccccccc
Confidence 56666778888888889999999999999998888877776651111111000 0112333344444445556677788
Q ss_pred hhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc-ccchhHHHHHHHHhhHhheeeecCCCCCCChHHHHh
Q 016055 312 PWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS-STGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQA 390 (396)
Q Consensus 312 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (396)
.+.++.|.+|++.|+++.++....++++++++|.+...+.+.. ....+.+++++..+..++.++++||+++++.+|+++
T Consensus 370 ~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 370 PWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 8899999999999999999999999999999999998888743 377788888888888888899999999999999988
Q ss_pred hc
Q 016055 391 SM 392 (396)
Q Consensus 391 ~~ 392 (396)
++
T Consensus 450 ~f 451 (451)
T PF00083_consen 450 MF 451 (451)
T ss_pred hC
Confidence 64
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.6e-37 Score=283.55 Aligned_cols=342 Identities=16% Similarity=0.151 Sum_probs=224.4
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhH--------HHHHHHHHHhhhhhcccccceeeeccc
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWW--------LDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
.+..++.+++|+++||+|||+++..++++++++++++++++|+++ +++.|+++|++.|+..+...+++.|++
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~ 147 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS 147 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC
Confidence 456678888999999999999999999999999999999999875 889999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhh------------hhHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHH
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAF------------LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~------------l~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~ 146 (396)
|+++|+++.++...+..+|..+++.+... .|||+.|++.++++++.+++...+||+|+|...+++.++
T Consensus 148 p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~ 227 (490)
T PRK10642 148 PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQ 227 (490)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhh
Confidence 99999999999998888888887755422 289999999887777666667789999987533221111
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcC
Q 016055 147 SEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAG 225 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 225 (396)
..+ +..++.++.++++++++ +.+........... ....++....|.|.+++ ..+
T Consensus 228 ~~~-----------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g 282 (490)
T PRK10642 228 GDR-----------------------EGLQDGPKVSFKEIATK-HWRSLLTCIGLVIA-TNVTYYMLLTYMPSYLSHNLH 282 (490)
T ss_pred hcc-----------------------ccccccccCCHHHHHHH-hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 000 00001122345566653 22233322222222 22234455567777664 457
Q ss_pred CCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHH
Q 016055 226 FSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTG 302 (396)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (396)
.+.. .......++.+++.++.|+++||+|||+.+..+.....+......... . ..+...+....++.+
T Consensus 283 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~g 353 (490)
T PRK10642 283 YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--N-------SNVIGLIFAGLLMLA 353 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--h-------CCCHHHHHHHHHHHH
Confidence 6654 334445567788889999999999999977666544333222211110 0 111222222222222
Q ss_pred HhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cc-cchhHHHHHHHHhhHhheeeecCCC
Q 016055 303 SFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SS-TGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
.......+....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+. +. ....+......++. ++..++.||+
T Consensus 354 ~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~-~~~~~~~pes 432 (490)
T PRK10642 354 VILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIG-LITGVTMKET 432 (490)
T ss_pred HHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH-HHHHHHhccc
Confidence 222222334457778999999999999987777788888999999998873 22 33333333333332 2333445776
Q ss_pred CCC
Q 016055 381 KGR 383 (396)
Q Consensus 381 ~~~ 383 (396)
+++
T Consensus 433 ~~~ 435 (490)
T PRK10642 433 ANR 435 (490)
T ss_pred cCC
Confidence 544
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=8e-36 Score=276.58 Aligned_cols=382 Identities=32% Similarity=0.564 Sum_probs=273.4
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc---hhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK---AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.+..+..++.+++|+++||+|||+++..+.+++.++.+++.+.+ +++.+++.|+++|++.+...+...+++.|++|+
T Consensus 79 ~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 158 (481)
T TIGR00879 79 IFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPK 158 (481)
T ss_pred HHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCCh
Confidence 34566778888999999999999999999999999999986543 455899999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHh---hhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIG---AFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~---~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
++|++++++.+.+.++|..+++.++ ... +||+.|++.++..++..+..+++||+|+++..+++.+++++..++
T Consensus 159 ~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 238 (481)
T TIGR00879 159 ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLAR 238 (481)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHH
Confidence 9999999999999999999999998 443 899999997777777777777899999988777777666655555
Q ss_pred HhCCCcchHHHHHHHH---HHHHHHhhccchhHHHhhhhh--hhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCc
Q 016055 154 LRGADADISEEAAEIR---EYTETLERLSEGGILELFQRK--YAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSG 228 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (396)
..+.+....+..+... ...+.+.+..+..+++.++.. ..++......+..+..........++.+.+.++.+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 318 (481)
T TIGR00879 239 LRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVST 318 (481)
T ss_pred HhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCc
Confidence 4433322221111111 111111111112233333321 23444444555555555555667788888888888776
Q ss_pred h---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhh
Q 016055 229 S---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 229 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
. .......++.+++.++.+++.||++||+.+..+..+.+++...+............ .......+....++..++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 397 (481)
T TIGR00879 319 DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSS-KSSGNVAIVFILLFIAFFA 397 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcc-cchhHHHHHHHHHHHHHHH
Confidence 4 55566677888999999999999999998887776666665555532211110000 0013333444444555556
Q ss_pred ccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCCC
Q 016055 306 LGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGRT 384 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (396)
.+..+....+..|.+|++.|+++.++.+...++|.+++|.+.+.+.+ .++...+++.+++..+..++..++.+|+++++
T Consensus 398 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 477 (481)
T TIGR00879 398 MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRT 477 (481)
T ss_pred ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCC
Confidence 66667777888999999999999999999999999999999999888 46666677777777777776667778777665
Q ss_pred hH
Q 016055 385 LE 386 (396)
Q Consensus 385 ~~ 386 (396)
.+
T Consensus 478 ~~ 479 (481)
T TIGR00879 478 LE 479 (481)
T ss_pred hh
Confidence 43
No 10
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.5e-35 Score=242.95 Aligned_cols=364 Identities=18% Similarity=0.216 Sum_probs=275.3
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
+.|+++++..+|..+|++|||+.+.+..+...+...+.+.++|+..+.+.|.+.|+|.|+ .|...++-.|.-|..+|..
T Consensus 123 ~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~ 201 (528)
T KOG0253|consen 123 FLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWL 201 (528)
T ss_pred HhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCc
Confidence 468888999999999999999999999999999999999999999999999999999999 8888899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcch
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADI 161 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
.+-.. ..+.+|.++...++... ||||.......+..+.....+++|||||+...+++++++.+.++++.+.|...
T Consensus 202 ~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~q 280 (528)
T KOG0253|consen 202 LTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQ 280 (528)
T ss_pred chhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCC
Confidence 77666 88999999988887665 99999988888877777788889999999999999999999998887655321
Q ss_pred --------------HHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcC--
Q 016055 162 --------------SEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAG-- 225 (396)
Q Consensus 162 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 225 (396)
++|..+..+...+..++...+..+++..+ +++..+.....++.+...++.........++...
T Consensus 281 lplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~-lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c 359 (528)
T KOG0253|consen 281 LPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPK-LRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDAC 359 (528)
T ss_pred CCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcc
Confidence 11111111111122234455667777544 4444444444444444444444444444443321
Q ss_pred -C-----------------Cch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhh
Q 016055 226 -F-----------------SGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ 284 (396)
Q Consensus 226 -~-----------------~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (396)
. +.. .-..+..+..++|.++.+++.||+|||+.+...+++.++..+.+...
T Consensus 360 ~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-------- 431 (528)
T KOG0253|consen 360 PLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-------- 431 (528)
T ss_pred ccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh--------
Confidence 0 000 33456678999999999999999999999988888887777766653
Q ss_pred cccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHH
Q 016055 285 WIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSA 364 (396)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (396)
...... ....+..-.+..+.....+.|+.|.+|+..|+++.|.+....++|+++.|++. ...+...+.+..++++
T Consensus 432 ---~~rn~~-tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~ 506 (528)
T KOG0253|consen 432 ---KTRNAY-TVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGA 506 (528)
T ss_pred ---cCcchh-HHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHH
Confidence 112222 22223333444555667789999999999999999999999999999999998 5556667778888899
Q ss_pred HHHhhHhheeeecCCCCCCCh
Q 016055 365 ICSLTVLFVAKLVPETKGRTL 385 (396)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~ 385 (396)
++++.++...++..|+|+|+.
T Consensus 507 ~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 507 LFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HHHHHHHHheeeeeccCCCCC
Confidence 988888888888889988863
No 11
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2e-34 Score=268.59 Aligned_cols=375 Identities=21% Similarity=0.167 Sum_probs=276.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|..|.++|..++|+++||+|||++++.++++..++.+..++++|++.+++.|+++|++.++.......++.|++++++|
T Consensus 126 ~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R 205 (521)
T KOG0255|consen 126 LFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQR 205 (521)
T ss_pred HHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC---
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD--- 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l--~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~--- 158 (396)
+.+..+ ......++.+++..++++ +||+.+++..++..+.++.++..||+|||+..+++.+++.+.+++..+.|
T Consensus 206 ~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~ 284 (521)
T KOG0255|consen 206 GLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRK 284 (521)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCC
Confidence 999999 666666677777766666 89999999999988887777777899999999999999999999886544
Q ss_pred cchHHHHHHH-HHH-HHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHHH
Q 016055 159 ADISEEAAEI-REY-TETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMV 236 (396)
Q Consensus 159 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
.+.++...+. ... .+....+++..+.++++.+..++......+.++.. ....+-........|.+........+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~----~~~y~gl~~~~~~lg~~~~~~~~~~~ 360 (521)
T KOG0255|consen 285 LSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF----SLVYYGLSLNVSGLGGNIYLNFTLSG 360 (521)
T ss_pred CCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH----hHHHHhhhhhhhhcCchHHHHHHHHH
Confidence 2222222221 111 11111223356888888875555555555554322 12222223334445666666666777
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
....++....+...|+.|||.....+..+..++++...+..... ..........+...+...+ ....+.+.
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 431 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL--------GGWLHWILPLLGKFFIGSA-FNLIFLYS 431 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc--------hhHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 78888888889999999999999999988888888888753211 1012222222222222323 33447999
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCCCCCChHHHHhhc
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASM 392 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (396)
.|.+|+..|+.+.+..+....++.+++|.+...............++....+.+.+...++||++++.+.+..++.
T Consensus 432 ~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~ 507 (521)
T KOG0255|consen 432 AELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA 507 (521)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence 9999999999999999999999999999998655553333333334666666666666889999988876554443
No 12
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=255.48 Aligned_cols=330 Identities=14% Similarity=0.088 Sum_probs=215.0
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhh--------HHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
..++.++.|+++||+|||+++..+.++++++++++++++|++ .++++|+++|++.|...+....++.|++|+
T Consensus 77 ~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 156 (438)
T PRK09952 77 RPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPK 156 (438)
T ss_pred HhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCC
Confidence 345667789999999999999999999999999999999987 588899999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhh------------hhHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAF------------LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESE 148 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~------------l~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~ 148 (396)
++|++..+..+.+..+|.+++..+... .+||++|++.+++.++........||+|+|...+++.++.
T Consensus 157 ~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~- 235 (438)
T PRK09952 157 NKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA- 235 (438)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-
Confidence 999999999999999999888765432 3899999998887766666666788988654322111000
Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHH-HhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCC
Q 016055 149 AALQRLRGADADISEEAAEIREYTETLERLSEGGIL-ELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGF 226 (396)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 226 (396)
+++.+.. ..+++++.+.... ........ ..+....+.+.+. +..+.
T Consensus 236 -----------------------------~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~y~~~~~g~ 283 (438)
T PRK09952 236 -----------------------------KKRIPVIEALLRHPGAFLKII--ALRLCELL-TMYIVTAFALNYSTQNLGL 283 (438)
T ss_pred -----------------------------cccCCHHHHHHHchHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHhcCC
Confidence 0001111 2333332222211 11111111 2333444555444 44566
Q ss_pred Cch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHH
Q 016055 227 SGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGS 303 (396)
Q Consensus 227 ~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (396)
+.. ......+...+++.++.|+++||++||+.+..+.++..++...+.... .. .+....+....++.+.
T Consensus 284 s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 284 PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL--EA------QSIFWIVFFSIMLANI 355 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--Hc------CChHHHHHHHHHHHHH
Confidence 665 233344566777888999999999999887666554433332222111 00 1122222222233233
Q ss_pred hhccccchhhhhhcccCCcCcchhhhHHHHHHHH-HHHHHHHHHhHHHHH-h-cccchhHHHHHHHHhhHhheeeecCC
Q 016055 304 FSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSW-LGSWIISFTFNFLMK-W-SSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 304 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
......+..+++..|.+|++.|+++.++.+.... +++.++|.+.+.+.+ . +.+.....+..+..+.+.+..+..++
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 3333455667899999999999999999776654 899999999999988 3 22233333333333333333344454
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.4e-33 Score=252.43 Aligned_cols=318 Identities=17% Similarity=0.168 Sum_probs=206.8
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhh--------HHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
..++.+++|+++||+|||+++..+.++++++++++++++++. .+++.|+++|++.|+..+...+++.|++|+
T Consensus 76 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~ 155 (432)
T PRK10406 76 RPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVE 155 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC
Confidence 347778899999999999999999999999999999999875 588999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhh------------hhHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAF------------LNWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESE 148 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~------------l~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~ 148 (396)
++|+++.++.+.+...|.++++.+... .|||++|++.++++++.......+||+|++..+
T Consensus 156 ~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~-------- 227 (432)
T PRK10406 156 GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR-------- 227 (432)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh--------
Confidence 999999999988888888887765332 289999999888887776666667887642100
Q ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCC
Q 016055 149 AALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFS 227 (396)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 227 (396)
+++++.+++++++++..+...... .+.....++....|.|.+++ +.+.+
T Consensus 228 ---------------------------~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~lp~~l~~~~g~s 277 (432)
T PRK10406 228 ---------------------------ALKEAGSLKGLWRNRRAFIMVLGF---TAAGSLCFYTFTTYMQKYLVNTAGMH 277 (432)
T ss_pred ---------------------------hhcccccHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 000112456666654433222221 11111123445556666654 45776
Q ss_pred ch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHh
Q 016055 228 GS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSF 304 (396)
Q Consensus 228 ~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (396)
.. .......+...++..+.|+++||++||+.+.....+..+....+... ... ..+..............
T Consensus 278 ~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 278 ANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA--LQN------VSSPYAAFGLVMCALLI 349 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH--HHc------CCcHHHHHHHHHHHHHH
Confidence 54 33444455667778888999999999987654443332222111110 000 11111111111111111
Q ss_pred hccccchhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhh
Q 016055 305 SLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 305 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (396)
.....+..+.+.+|.+|++.|+++.|+.+..++. .+...|.+.+.+.+.+.+....++.+...+.+.+
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 1122234567889999999999999999988775 3445788777664454444444433333333333
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8.5e-33 Score=252.06 Aligned_cols=317 Identities=17% Similarity=0.147 Sum_probs=219.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++.++++++++++++++.++++|+++|++.+...+....++.|++|+++|
T Consensus 61 ~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r 140 (426)
T PRK12307 61 AAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLK 140 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHh
Confidence 34567778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++.++...+.++|.++++.+...+ +||+.|++..+..++........||++++..++.+. +++
T Consensus 141 ~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------~~~ 208 (426)
T PRK12307 141 SKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG------------KGK 208 (426)
T ss_pred hHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc------------ccc
Confidence 9999999999999999999887765 899999886554444443334456665432211000 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
..+ ...+..+.++++.++++..+.........+. ..........+.|.+.++.+.++. .......
T Consensus 209 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 276 (426)
T PRK12307 209 HSQ-----------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAA 276 (426)
T ss_pred ccc-----------cchhhhhHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 000 0000112245666766655544433322222 222223345566777777777655 3445566
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++.++.+++.||++||+.+..+..+..+....+... . ..............+....+..+....++
T Consensus 277 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (426)
T PRK12307 277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI---P-------QDNYLLLGACLFGLMATNVGVGGLVPKFL 346 (426)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---c-------cccHHHHHHHHHHHHHhcccHhHHHHHHH
Confidence 7889999999999999999988776665554443333221 0 11111111111112222233344555788
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS 354 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 354 (396)
.|.+|++.|++++|+.+...++++.++|.+.|.+.+..
T Consensus 347 ~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 347 YDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999843
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-33 Score=236.98 Aligned_cols=319 Identities=16% Similarity=0.117 Sum_probs=233.5
Q ss_pred ccccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 3 LSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 3 ~~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
..|..+..++.|+...+.||+.||++++..+.++.++++++++++||+.++++|++.|+..|..++...++..|..|++|
T Consensus 55 s~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~ 134 (394)
T COG2814 55 TAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK 134 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 35667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
|++++++...+.+++.++|.+++.++ |||..|++.+.++++..+ .+..+| |+...
T Consensus 135 ~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~------------------ 194 (394)
T COG2814 135 RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS------------------ 194 (394)
T ss_pred hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC------------------
Confidence 99999999999999999999888877 999999999998888765 456678 21000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
++++.+..+..+.+|++..+..+....+....+ +...+|.-|.+.+..|++.+ .....
T Consensus 195 ----------------~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~---F~~ftYi~P~L~~v~g~s~~~vs~~Ll~ 255 (394)
T COG2814 195 ----------------GSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGH---FALYTYIRPFLESVAGFSVSAVSLVLLA 255 (394)
T ss_pred ----------------CCCCcchhHHHHHhcCchHHHHHHHHHHHHcch---hhhHHhHHHHHHHccCCCHhHHHHHHHH
Confidence 000111112445566666655555544444433 34445555666666787775 77778
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
++++.++|+.++|++.|| +.|+.+.....+.++....+.+. ..+.........+.++...........
T Consensus 256 ~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~-----------~~~~~~~~~~~~~wg~a~~~~~~~~~~ 323 (394)
T COG2814 256 FGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT-----------GASPALALALLFLWGFAFSPALQGLQT 323 (394)
T ss_pred HHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh-----------cchHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 889999999999999999 88887777767776666665553 222333333333333322222233334
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhhe
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (396)
...+ .-++.+..+.+++....|+|..+|..++|.+.|..+.......+....+.+...
T Consensus 324 ~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 324 RLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLL 381 (394)
T ss_pred Hhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 4444 335788999999999999999999999999999544444444444444444333
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.5e-32 Score=242.78 Aligned_cols=319 Identities=14% Similarity=0.094 Sum_probs=211.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|..+.+++.++.|+++||+|||+++..+......+.......+|++.+++.|+++|++.+. .+.....+.|++|+++|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHH
Confidence 35567777888899999999999987766555544433333347999999999999999986 45555667999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
++++++.+.+.++|.++++.++..+ +||+.|++.++++++. ++.++++||+|++.. +..
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~---~~~------------- 176 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA---EGF------------- 176 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCc-------------
Confidence 9999999999999999999998888 9999999977776655 445667899886421 000
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVVI 238 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
+ .+ + ...+++++++++..+.......+.. ...+.+..|.|.++++.+++.. ......+.
T Consensus 177 -~--~~-----~--------~~~~~~~ll~~~~~~~~~~~~~~~~----~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~ 235 (368)
T TIGR00903 177 -G--FK-----D--------AVKEFGALAGRKDLWIIGAILGFGV----ALFDNLAIWLEAALRPAGLEDI-AGDAVALA 235 (368)
T ss_pred -c--hH-----H--------HHHHHHHHHcChhHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCChH-HHHHHHHH
Confidence 0 00 0 0013566777766654444333333 3355666788888887777654 23333444
Q ss_pred HHHHhhHHHHHHhhcCCc---ceeee-cchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 239 QIPMTLLGVLLMDKSGRR---PLLLV-SAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 239 ~~~~~~~~g~l~d~~g~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
...+.+..++++||..|| +.... .....++....+... .+.. .......+.+++.....+..++
T Consensus 236 ~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~-----------~~~~-~~~~~~~l~~~~~~~~~~~~~~ 303 (368)
T TIGR00903 236 ILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE-----------LNRL-ALFAFIGIAGLLMLPAYAIIMD 303 (368)
T ss_pred HHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc-----------cccH-HHHHHHHHHHHhhhhhHHHHHH
Confidence 445555568888887654 22221 222222222121110 1122 2222333344445455566778
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhhe
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (396)
+.+|.+|++.|+++.|+.+..+++++..+|.+.+.+.. +....+..+++...+.++..
T Consensus 304 ~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 304 WIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987774 44455666666666655543
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=4.2e-32 Score=246.12 Aligned_cols=326 Identities=18% Similarity=0.138 Sum_probs=218.7
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++.++++++++++++++.+++.|++.|++.+...+...+++.|++|+++|+
T Consensus 56 ~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~ 135 (405)
T TIGR00891 56 ALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRN 135 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhh
Confidence 44566778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----h--HHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----N--WRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~--wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
++.++.+.+..+|..+++.+++.+ + ||+.|++.++..++..+....+||++++..+++++++.++..++..+.+
T Consensus 136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (405)
T TIGR00891 136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGE 215 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccc
Confidence 999999999999999999988776 4 9999998777766666666778998765433222222111111111110
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCCch---hHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFSGS---IGMIA 234 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~ 234 (396)
...+++ .++.....++..+ +.............+.... ......+.|.+ .++.+.+.. .....
T Consensus 216 ~~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 282 (405)
T TIGR00891 216 HRIANI-----------VMTLAAAMVQSAG-KRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLKADLGLSPHTVANIVVF 282 (405)
T ss_pred hhhhhh-----------hhhhhHHhhhhhh-hhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCCCHHHHHHHHHH
Confidence 000000 0000001111111 1111111111112221211 12223334444 345677655 44556
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
..++.+++.++.+++.||++||+.+..+.....+........ ..+...+.....+.+....+..+....
T Consensus 283 ~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (405)
T TIGR00891 283 SNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI-----------GANVAVLGLGLFFQQMLVQGIWGILPK 351 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh-----------CCchHHHHHHHHHHHHHHccchhhHHH
Confidence 678889999999999999999998776655443222221110 112222222223333444455566678
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS 354 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 354 (396)
++.|.+|++.|++++|+.+...++|..++|.+.|.+.|..
T Consensus 352 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 391 (405)
T TIGR00891 352 HLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRL 391 (405)
T ss_pred HHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999943
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.8e-32 Score=247.06 Aligned_cols=305 Identities=19% Similarity=0.177 Sum_probs=217.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+.+++.++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 59 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~ 138 (406)
T PRK11551 59 GILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRG 138 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHH
Confidence 34566777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++++.+.+..+|..+++.++..+ +||+.|++.++..++.. ....++||+|++..++++.++.+
T Consensus 139 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------- 207 (406)
T PRK11551 139 TAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA----------- 207 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh-----------
Confidence 999999999999999999988665 89999998776655544 34556798875432211110000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
...++.++++..+.... .....+...........+.|.+.++.|.+.. .......
T Consensus 208 ---------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~ 265 (406)
T PRK11551 208 ---------------------PVLRALFGEGRATATLL-LWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFN 265 (406)
T ss_pred ---------------------hhHHHHhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHH
Confidence 00001111111111111 1111111112233455567777777777654 5555666
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++.++.|++.||++||+.+..+.....++...+.. .++........++.+....+..+...++.
T Consensus 266 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 333 (406)
T PRK11551 266 IGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA------------APSFAGMLLAGFAAGLFVVGGQSVLYALA 333 (406)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh------------cCcHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 788999999999999999998876654444444333322 11222222333334444445566777899
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS 354 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 354 (396)
.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..
T Consensus 334 ~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 334 PLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 99999999999999999999999999999999999843
No 19
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.8e-32 Score=249.41 Aligned_cols=343 Identities=17% Similarity=0.144 Sum_probs=222.4
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.|...+...+++.|++|+++|
T Consensus 66 ~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~r 145 (434)
T PRK11663 66 LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTER 145 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHH
Confidence 34456677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
++++++.+.+.++|..+++.+.+.+ +||+.|++.+++.++. ++..++++|+|++.......++.++.
T Consensus 146 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-------- 217 (434)
T PRK11663 146 GGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-------- 217 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc--------
Confidence 9999999999999999999888776 8999999988766554 34455678887543111110000000
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHH-----hhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch---
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILE-----LFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS--- 229 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 229 (396)
++. .+ + ++.++.+.++ .++++..+........ ..........|.|.++ ++.|.+..
T Consensus 218 ---~~~---~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~l~~~~g~s~~~a~ 282 (434)
T PRK11663 218 ---LEL---AQ---Q--QEGAGLSRKEILTKYVLLNPYIWLLSFSYVL----VYVVRAAINDWGNLYMSETLGVDLVTAN 282 (434)
T ss_pred ---ccc---ch---h--ccccCCChhhhHHHHHhcChHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhccCCCHHHHH
Confidence 000 00 0 0000111222 3333433333222222 2222344555667666 44577665
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcC--Ccceee-ecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSG--RRPLLL-VSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
.......+++.+++++.|+++||+. +|+... .......+....+... . ..+...........+.+..
T Consensus 283 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~g~~~~ 352 (434)
T PRK11663 283 SAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM---P-------FASYVMQAACFFTIGFFVF 352 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc---c-------cccHHHHHHHHHHHHHHHh
Confidence 4555667888999999999999983 333221 1111111111111110 0 1111111122222222222
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCC
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
+..........|.+|++.|+++.|+.+...++|.+++|.+.|.+.| .++...+...+++.++.++......++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2222334567899999999999999999999999999999999999 555556666666665655544433433
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=4.8e-32 Score=246.02 Aligned_cols=342 Identities=13% Similarity=0.051 Sum_probs=241.0
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh-----hchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
+..+.+++.++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|+++|++.+...+...+++.|+.|
T Consensus 61 ~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 140 (417)
T PRK10489 61 TGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVG 140 (417)
T ss_pred HHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 34566777888999999999999999998888877665542 5678999999999999998888888999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHh
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLR 155 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~ 155 (396)
+++|+++.++.....++|..+||.+++.+ +||+.|++.++..++..+..+.+||+++.. ++++
T Consensus 141 ~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~----------- 207 (417)
T PRK10489 141 RENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPRE----------- 207 (417)
T ss_pred HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cccc-----------
Confidence 99999999999999999999999998876 899999988877776666666777754210 0000
Q ss_pred CCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---hH
Q 016055 156 GADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS---IG 231 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 231 (396)
+ +.+ +.+..++..++++..+........... ......+.|.+.++ .+.++. ..
T Consensus 208 ----~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~ 264 (417)
T PRK10489 208 ----H---PLR-----------SLLAGFRFLLASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQMGAAQIGLL 264 (417)
T ss_pred ----c---chH-----------HHHHHHHHHHcChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCCChhHhHHH
Confidence 0 000 001123344455544433332222211 12234455656555 676654 44
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccch
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGI 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
.....++.+++.++.+++.||.++++.+..+..+..++.+.+.. .++........++.+.+.....+.
T Consensus 265 ~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~ 332 (417)
T PRK10489 265 YAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL------------MPMWILAVLCLALFGYLSAISSLL 332 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc------------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 55566788899999999999977776666666555555444332 122222222333333333333455
Q ss_pred hhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCCChHHHHh
Q 016055 312 PWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQA 390 (396)
Q Consensus 312 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (396)
..+++.|..|++.|++++|+.+...++|..++|.+.|.+.| .+....+...+++..+.+++.....++.|+++++|.++
T Consensus 333 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 333 QYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 56788999999999999999999999999999999999999 56666677777777777777777778888888888777
Q ss_pred hcCC
Q 016055 391 SMNP 394 (396)
Q Consensus 391 ~~~~ 394 (396)
+..|
T Consensus 413 ~~~~ 416 (417)
T PRK10489 413 DASD 416 (417)
T ss_pred CCCC
Confidence 6655
No 21
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=235.34 Aligned_cols=343 Identities=19% Similarity=0.210 Sum_probs=245.3
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
+|..+.-++=.+.|.++||.+.|+.+..++++.++.+++++++++.+.+.++.+++|..+|..+|.+...++.|+|++||
T Consensus 72 ~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eR 151 (448)
T COG2271 72 AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKER 151 (448)
T ss_pred HHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcccc
Confidence 34445556667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh--hhh----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIG--AFL----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~--~~l----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
|+..++++.+.++|..+.|++. +.+ +||..|++.++++++. ++..+..+|+|+-.-..
T Consensus 152 G~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP--------------- 216 (448)
T COG2271 152 GTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP--------------- 216 (448)
T ss_pred CceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC---------------
Confidence 9999999999999999999888 555 8999999999887766 55666788888421000
Q ss_pred CCcchHHHHHHHHHHHHHHhhccchhHH-----HhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch-
Q 016055 157 ADADISEEAAEIREYTETLERLSEGGIL-----ELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS- 229 (396)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 229 (396)
+.++..++..+..+++++.+..+.+ -.++||..|.+.+...+... .-+.+..|.|.++.+ .+++..
T Consensus 217 ---~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYi----vR~gi~dW~p~YL~e~k~~s~~~ 289 (448)
T COG2271 217 ---PIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYV----VRYGINDWGPLYLSEVKGFSLVK 289 (448)
T ss_pred ---CHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHhhhHHHHHHHhcCCCHHH
Confidence 0000000111110111111112333 34555555544444444444 355667777765544 566654
Q ss_pred --hHHHHHHHHHHHHhhHHHHHHhhc--CCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhh
Q 016055 230 --IGMIAMVVIQIPMTLLGVLLMDKS--GRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 230 --~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
.....+-.++++|+++.|+++||. |||....+.+.+....++..... .+..+.......+...+++.
T Consensus 290 a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~---------~~~~~~~l~~~~l~~iGf~I 360 (448)
T COG2271 290 ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWL---------APNGSYLLDAILLFIIGFLI 360 (448)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHc---------CCCccHHHHHHHHHHHHHHH
Confidence 556666689999999999999996 56655543333333322222221 01234566666777777777
Q ss_pred ccccchhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeec
Q 016055 306 LGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLV 377 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (396)
.++.-+.-..+.|..|++..|++.|+...++++ |.+.+....|++.| .++...+.++.+...++.++.....
T Consensus 361 yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 361 YGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 777766668899999999999999999999999 99999999999988 4666667666666666555544333
No 22
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.5e-31 Score=241.48 Aligned_cols=328 Identities=13% Similarity=0.123 Sum_probs=213.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..++++++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|
T Consensus 51 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 130 (412)
T TIGR02332 51 LFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFR 130 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHH
Confidence 45567778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----------hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQ 152 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----------~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~ 152 (396)
++++++++.+.++|..+++.+++.+ +||+.|++.++++++. .+.++++||+|+... .-++++.+...+
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~~~~~ 209 (412)
T TIGR02332 131 ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKKALKE 209 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHHHHHH
Confidence 9999999999999999999887653 8999999988877655 445567899884210 001111111111
Q ss_pred HHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHc--CCCch-
Q 016055 153 RLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA--GFSGS- 229 (396)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 229 (396)
..+..+.+.++ .+ +..+..+...+..+++++ ++..+ ...+..++.......+..|.|.++++. +.+..
T Consensus 210 ~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~ 280 (412)
T TIGR02332 210 MIDNDQLTLEQ-PE---GAFAHAAMPQRSMLREIF-TPAIM----LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM 280 (412)
T ss_pred HHHhccccccc-cc---cccccccccHHHHHHHhc-ChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Confidence 11111000000 00 000000000111233333 22222 222333333334556677888888764 34332
Q ss_pred --hHHHHHHHHHHHHhhHHHHHHhhcCCccee-eecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 230 --IGMIAMVVIQIPMTLLGVLLMDKSGRRPLL-LVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 230 --~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
.......++.+++.++.|+++||+++|+.. ........++. .+.. .. .......... ........
T Consensus 281 ~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~----~~------~~~~~~~~~~-~~~~~g~~ 348 (412)
T TIGR02332 281 IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLAS----AT------DHNLIQLLGI-IMASMGSF 348 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHH----hc------CCHHHHHHHH-HHHHHHhh
Confidence 456667788999999999999999977643 22222222221 1111 00 1111111111 11111122
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
...+..+....|.+|++.|+++.|+.+...++|++++|.+.|.+.|.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~ 395 (412)
T TIGR02332 349 SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA 395 (412)
T ss_pred hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Confidence 22334445667889999999999999999999999999999999984
No 23
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.6e-31 Score=241.11 Aligned_cols=299 Identities=20% Similarity=0.206 Sum_probs=192.8
Q ss_pred hhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhH--------HHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 11 SNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWW--------LDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 11 ~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
++.++.|+++||+|||++++.+.+++.+++++++++++++. +++.|+++|++.+...+....++.|++|+++
T Consensus 71 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 150 (434)
T PRK15075 71 LGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR 150 (434)
T ss_pred hHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc
Confidence 45678999999999999999999999999999999999874 6889999999999999989999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHH
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~ 150 (396)
|++++++...+.++|..+++.++..+ +||++|++..+...+........||++++..+++
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-------- 222 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-------- 222 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh--------
Confidence 99999999888777777766665542 8999998865443332222333344322110000
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS 229 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 229 (396)
+.+.+..+++..+++ +.........+.....+.....|.|.++++ .|.+..
T Consensus 223 -------------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 274 (434)
T PRK15075 223 -------------------------RPSMREIFRSLAANW---RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAA 274 (434)
T ss_pred -------------------------ccccccHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 000011111222221 111111122222223355667777877765 577655
Q ss_pred ---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 230 ---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
.......++.+++.++.|+++||++||+.+..+.....+........ ... ............+.+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~g 346 (434)
T PRK15075 275 DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW--LVA------APSFARMLAVELWLSFLYG 346 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HHc------CCchHHHHHHHHHHHHHHH
Confidence 44455667888999999999999999987665443332211111100 000 1111111111122222223
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHHh
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMKW 353 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~~ 353 (396)
...+..+.+..|.+|++.|+++.++.+..... ++.++|.+.|.+.|.
T Consensus 347 ~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 347 SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 33445557889999999999999997666554 588899999999984
No 24
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=240.25 Aligned_cols=315 Identities=13% Similarity=0.081 Sum_probs=217.1
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++..++++.+++++|++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 53 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~ 132 (390)
T PRK03545 53 YAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKA 132 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhh
Confidence 34455667778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++++...+.++|..++|++++.+ +||+.|++.++++++..+. ...+||+|+. +++
T Consensus 133 ~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~~~-------------- 193 (390)
T PRK03545 133 QALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE-----HSG-------------- 193 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----Ccc--------------
Confidence 999999999999999999988766 8999999988877665443 4445665420 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
+.++.++.+|++..+............. .....+..++..+..+.+.. ......+
T Consensus 194 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 194 -------------------SLKSLPLLFRRPALVSLYLLTVVVVTAH---FTAYSYIEPFVQQVAGLSENFATLLLLLFG 251 (390)
T ss_pred -------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 0012334555655444333322222221 11222233333344566654 4455566
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.++++++.+++.||.+||... .+..+...+...+... .++........++.+.......+......
T Consensus 252 ~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 319 (390)
T PRK03545 252 GAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPA-----------ANSEWHLSVLSIFWGIAIMCIGLAMQVKV 319 (390)
T ss_pred HHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHH-----------hchHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 78899999999999999887643 3333333332222211 12222223333333444444445555777
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhe
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (396)
.|..| +.|++++|+.+...++|..+||.+.|.+.| .+....+...+.+..+..++.
T Consensus 320 ~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 320 LKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 77766 578999999999999999999999999999 555555555555555544443
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=4.5e-32 Score=249.25 Aligned_cols=321 Identities=17% Similarity=0.071 Sum_probs=207.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh-----hchhhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
.|..+..++.++.|+++||+|||+++..+++++++..+..++ ++|++.+++.|+++|++.+...|...+++.||+
T Consensus 72 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (467)
T PRK09556 72 GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT 151 (467)
T ss_pred HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc
Confidence 455667788889999999999999999998888887776665 689999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhhh-------hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHH
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAFL-------NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-------~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~ 150 (396)
|+++|++++++...+.++|.++++.+..++ +||..|.+.+++.++..+ .+++.+|+|+..... +.++ .
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~~~~---~ 227 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-KAEE---I 227 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-Chhh---c
Confidence 999999999999999999999998887543 488888887776665543 444567766421110 0000 0
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhH-HHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCc
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGI-LELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSG 228 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (396)
..+ ..+.+++ + .+.++......+ ++.++++..+....... +..........|.|.++ ++.|.+.
T Consensus 228 ---~~~-~~~~~~~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~p~yl~~~~g~s~ 293 (467)
T PRK09556 228 ---FGE-PISEEDK-----E-TESTDMTKWQIFVEYVLKNPVIWLLCFANI----FLYIVRIGIDNWSPVYAFQELGFSK 293 (467)
T ss_pred ---ccC-ccchhhh-----c-cccccCcHHHHHHHHHHcChHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHccCCCH
Confidence 000 0000000 0 000000000111 22455544443333222 22222344566777665 4467776
Q ss_pred h---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhh
Q 016055 229 S---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 229 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
. .......++.+++.++.|+++||++||+..........++...+... . .++........+..+...
T Consensus 294 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 294 EDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ---H-------ATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH---h-------cCcHHHHHHHHHHHHHHH
Confidence 5 44455667889999999999999999886544333332222111111 0 112222222233333222
Q ss_pred ccccchhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHH
Q 016055 306 LGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMK 352 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~ 352 (396)
.+..........|.+|++.++++.|+.+..+++ |.+++|.+.|.+.|
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 232223335677999999999999999999997 77999999999998
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5e-31 Score=236.89 Aligned_cols=325 Identities=13% Similarity=0.083 Sum_probs=220.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+..+++++.+++++++|++.+++.|+++|++.+...+....++.|++| ++|
T Consensus 52 ~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~ 130 (393)
T PRK09705 52 LPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRT 130 (393)
T ss_pred HHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccc
Confidence 3456777888899999999999999999999999999999999999999999999999999999999999999997 789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhcc-CCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFI-PESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+++++.+..+...|..+++.++..+ +||+.+.+.++..++.....+.. ++.|+ +++
T Consensus 131 ~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----------- 192 (393)
T PRK09705 131 PLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA-------SSH----------- 192 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-------ccc-----------
Confidence 9999999988888888888777664 79998877665554443333322 12120 000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
++ +.+.++.++++..+.......+. ...+.....+.|.+.++.+.+.. .....
T Consensus 193 -------------------~~-~~~~~~~l~~~~~~~l~~~~~~~----~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~ 248 (393)
T PRK09705 193 -------------------KT-TTTPVRVVFTPRAWTLGVYFGLI----NGGYASLIAWLPAFYIEIGASAQYSGSLLAL 248 (393)
T ss_pred -------------------CC-CcCCcccccCHhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCCChhhhhHHHHH
Confidence 00 00112223333333222222222 22344555667777777777655 55667
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
.+++.++++++.+++.||.+||+....+..+..++...+... . .+... .. . .+.+.......|....
T Consensus 249 ~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~---~-------~~~~~-~~-~-~l~g~g~g~~~~~~~~ 315 (393)
T PRK09705 249 MTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL---P-------LQLPV-LW-A-MVCGLGLGGAFPLCLL 315 (393)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc---c-------chHHH-HH-H-HHHHHhccchHHHHHH
Confidence 778999999999999999999988777766665555443321 0 11111 11 1 1223333344455555
Q ss_pred hhcccCC-cCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccch-hHHHHHHHHhhHhheeeecCCCCCCC
Q 016055 315 IMSEVFP-INMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGT-FFAFSAICSLTVLFVAKLVPETKGRT 384 (396)
Q Consensus 315 ~~~~~~p-~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (396)
...+..+ ++++++..|+.+...+++..++|.+.|++.|. +.+.. +.+...+..+...+...+.||+++|.
T Consensus 316 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 316 LALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 6666664 67899999999999999999999999999993 43333 33444444444444455666666554
No 27
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-33 Score=237.13 Aligned_cols=371 Identities=20% Similarity=0.226 Sum_probs=264.1
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc-------hhhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK-------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
..|-+.|++++|+++||+|||+++...+++..+++++++++. -..++...|++.|+|.|+.+|...+..+|..
T Consensus 94 ~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~a 173 (538)
T KOG0252|consen 94 LVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESA 173 (538)
T ss_pred HHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhh
Confidence 356778888899999999999999999999999999887752 2467888999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhhh-------------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHh
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAFL-------------------NWRILALIGTIPCLVQLIGLCFIPESPRWLA 139 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-------------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 139 (396)
.+++||...+...+..+.|.+.|.+++..+ -||..+.+..++++..+..++.+||+++|..
T Consensus 174 n~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~a 253 (538)
T KOG0252|consen 174 NKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTA 253 (538)
T ss_pred hhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHH
Confidence 999999999988888888877777666554 3999999999999999999999999999875
Q ss_pred hcCCh-HHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchh---HHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHH
Q 016055 140 KTGKG-IESEAALQRLRGADADISEEAAEIREYTETLERLSEGG---ILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAF 215 (396)
Q Consensus 140 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
...++ +.+. ++..+.... +.++.++. +...+.++.+ +...+...+. +.++.....++..-..++....
T Consensus 254 l~~~~~~~a~---~d~~k~~~~---~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL 325 (538)
T KOG0252|consen 254 LVSKKLKQAA---GDMKKVLSV---DIEAESTA-ESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNL 325 (538)
T ss_pred HhhcCHhhhh---hcccccccc---ccchhhcc-ccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhcccc
Confidence 44432 2222 111111111 00000000 1111111111 2233323322 3445555566655555677777
Q ss_pred hHHHHHHHcCCCch---h---------HHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhh
Q 016055 216 YASSIFISAGFSGS---I---------GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQ 283 (396)
Q Consensus 216 ~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (396)
+...+++..+..+. . ...+.....++|..+...++|++|||+..+.++.++.+..+.+......
T Consensus 326 ~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~---- 401 (538)
T KOG0252|consen 326 FQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ---- 401 (538)
T ss_pred HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc----
Confidence 77888887666544 1 1122223445567777889999999999999999998888777764211
Q ss_pred hcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH------hcccc
Q 016055 284 QWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK------WSSTG 357 (396)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~------~~~~~ 357 (396)
........+...+...+...+.+.....+.+|.+|++.|++..|+...++..|++++...+.++.+ .+...
T Consensus 402 ---~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~ 478 (538)
T KOG0252|consen 402 ---LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRN 478 (538)
T ss_pred ---ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchH
Confidence 012333444455555667788888888999999999999999999999999999999999999888 23344
Q ss_pred hhHHHHHHHHhhHhheeeecCCCCCCChHHHHhhc
Q 016055 358 TFFAFSAICSLTVLFVAKLVPETKGRTLEEIQASM 392 (396)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (396)
.+++++.+..+. .+..+++||+++++.+|++++.
T Consensus 479 v~~i~~~~~~~g-i~~T~l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 479 VFIILAGCMLLG-ILFTLLIPETKGKSLEEISNEE 512 (538)
T ss_pred HHHHHHHHHHHh-HheeEEeecccccCHHHhcChh
Confidence 556666655554 4556677899999998876543
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.98 E-value=4.3e-31 Score=238.88 Aligned_cols=343 Identities=17% Similarity=0.168 Sum_probs=226.1
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+.+++.++.|+++||+|||+++..+.++.+++..++++++|++.+++.|+++|++.+...+....++.|++|+++|+
T Consensus 38 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 117 (399)
T TIGR00893 38 FSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERA 117 (399)
T ss_pred HHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHH
Confidence 44566777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+.+++.+...++|.++++.+++.+ +||+.|++.++..++..+. .+..||+|+... ..++++.+...++...+
T Consensus 118 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 194 (399)
T TIGR00893 118 TAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLLAE-- 194 (399)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCCHHHHhhcchhhccc--
Confidence 999999999999999999998876 8999999988776665544 444666553110 00111110000000000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~ 235 (396)
...++.++.++.+.++.++++..+........... .......+.|.+.+ ..+.+.. ......
T Consensus 195 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (399)
T TIGR00893 195 ----------QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI----GLGFFLTWFPTYLVQERGLSILEAGFMASLP 260 (399)
T ss_pred ----------cccccccCCCccchHHHhcCHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHhcccHHHhhHHHHHH
Confidence 00001112223345666666554444333333322 23444555555554 4566544 555666
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecc-hHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSA-AGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
.+..+++.++.+++.||++||+...... ....++............. .+......... ..+.+..+..+...+
T Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~ 334 (399)
T TIGR00893 261 GIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-----VNIPYAALALV-ALGFFGLGAGAIGWA 334 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-----chhHHHHHHHH-HHHHhchhhhhHHHH
Confidence 7888899999999999999886322211 1111221111111111100 11222222222 223333346778889
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-c-ccchhHHHHHHHHhhH
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-S-STGTFFAFSAICSLTV 370 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~ 370 (396)
+..|.+|+++|+++.|+.+...++|..++|.+.|.+.|. + +...+...+.+..+..
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 392 (399)
T TIGR00893 335 LISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGA 392 (399)
T ss_pred HHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999984 4 3444444444444433
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=1.3e-30 Score=234.06 Aligned_cols=317 Identities=11% Similarity=-0.020 Sum_probs=218.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.+...+.....+.|++| ++|
T Consensus 46 ~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 124 (377)
T TIGR00890 46 LLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKR 124 (377)
T ss_pred HHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-ccc
Confidence 3456777888899999999999999999999999999999999999999999999999999888888888889887 579
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHH-hccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
+++.++...+.++|..+++++...+ +||+.|++.+++.++..+.. ++++|+|+.. .+++ +
T Consensus 125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~ 189 (377)
T TIGR00890 125 GLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL-IKTN--------------I 189 (377)
T ss_pred HHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc-cccC--------------c
Confidence 9999999999999988766555444 79999999888777665443 4455443210 0000 0
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAM 235 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (396)
+. ++++.+.++.++++..+............ ......+.+.+.++.+.+.. ......
T Consensus 190 -~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 190 -EV---------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVS----GLLLIGLYKPYGQSLGLSDGFLVLAVSIS 249 (377)
T ss_pred -cc---------------chhhhhHHHHHcCccHHHHHHHHHHHhHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 00 00011233455555544433333222221 12222333444566666554 455566
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.+..++++++.+++.||++||+.+..+.....++...+.... ..............+.......+....+
T Consensus 250 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 319 (377)
T TIGR00890 250 SIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP----------MLNDVLFLATVALVFFTWGGTISLFPSL 319 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc----------cchhHHHHHHHHHHHHHhccchhccHHH
Confidence 778889999999999999999988777776666655544320 1111112222223333333444555678
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
..|.+|+++|+++.|+.+....+|..++|.+.|.+.+ .++...+.+.+++.
T Consensus 320 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~ 371 (377)
T TIGR00890 320 VSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFA 371 (377)
T ss_pred HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Confidence 8999999999999999999999999999999999988 44444444444443
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.98 E-value=8.1e-31 Score=236.90 Aligned_cols=323 Identities=17% Similarity=0.102 Sum_probs=214.2
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh--------chhhHHHHHHHHHHhhhhhcccccceeee
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS--------KAAWWLDLGRLLVGYGMGLLSYVVPVYIA 75 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 75 (396)
.+..+.+++.++.|+++||+|||+++..+.++.+++.+.+.++ .+++.+++.|+++|++.+...+...+++.
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 138 (399)
T PRK05122 59 LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGI 138 (399)
T ss_pred HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHH
Confidence 3455677788899999999999999999999988877766543 25678999999999999999999999999
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHH
Q 016055 76 EITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAAL 151 (396)
Q Consensus 76 ~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~ 151 (396)
|++|+++|++++++...+..+|.++++.+++.+ +||+.+++..+..++..+.....||+++ ++++
T Consensus 139 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----- 207 (399)
T PRK05122 139 GRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP------VKGE----- 207 (399)
T ss_pred hhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC------CCcc-----
Confidence 999999999999999999999999999888776 8999988766665544443333333221 0000
Q ss_pred HHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch-h
Q 016055 152 QRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS-I 230 (396)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (396)
+.+.++.+++. +.......+... .+.....+.+.+..+.+.+.. .
T Consensus 208 ----------------------------~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 253 (399)
T PRK05122 208 ----------------------------RLPFRRVLGRV--WPYGMGLALASI----GFGTIATFITLYYAARGWDGAAL 253 (399)
T ss_pred ----------------------------chhHHHHHHHH--HHHHHHHHHHHH----HHHHHHHHHHHHHHHcccccchH
Confidence 00111111111 111111111111 122233444444455554332 4
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccc
Q 016055 231 GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGG 310 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (396)
......++.+++.+..+++.||+++|+.+..+..+..++...+... . +........++.+.......+
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 254 ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-----------P-SPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-----------c-cHHHHHHHHHHHHHhHHHHHH
Confidence 4556677888899999999999999988776666666655544431 2 222223333344444444455
Q ss_pred hhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCCC
Q 016055 311 IPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGRT 384 (396)
Q Consensus 311 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (396)
.......|..|+++|+++.|+.+....+|..++|.+.|.+.+ .++...+...+.+..+..++ ....+++++|+
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 395 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLAL-TWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH-HHHhccccccc
Confidence 555677788999999999999999999999999999999988 45455555555544444333 33444444443
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=3e-30 Score=236.20 Aligned_cols=355 Identities=14% Similarity=0.093 Sum_probs=214.4
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc----hhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK----AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.+..+.+++.++.|+++||+|||+++..+.++.+++.+++++.+ +++.+++.|++.|++.+...+.....+.|++|
T Consensus 71 ~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~ 150 (452)
T PRK11273 71 GISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS 150 (452)
T ss_pred HHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCC
Confidence 34566778888999999999999999999999999999888753 78889999999999999988888888999999
Q ss_pred CCcchhHHHHHHHHHHHHHH-HHHHHhhhh----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 80 KNLRGGFTTVHQLMICIGVS-MTYLIGAFL----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~-~~~~l~~~l----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
+++|++++++++.+.++|.. .+++++..+ +||+.|++.+++.++. ++..+++||+|+....+++ ++.++ +
T Consensus 151 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~---~ 226 (452)
T PRK11273 151 QKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYKN---D 226 (452)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhhh---c
Confidence 99999999999999998864 455543222 9999999988776664 4556667888753211111 11000 0
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchhH-HHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch--
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGGI-LELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS-- 229 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 229 (396)
.+ ++. +..+.++.+.++.+ +..+|++..+...+...+... ..+....|.|.++++ .+++..
T Consensus 227 ---~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~~~ 291 (452)
T PRK11273 227 ---YP----DDY----NEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYL----LRYGILDWSPTYLKEVKHFALDKS 291 (452)
T ss_pred ---cc----ccc----ccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHH
Confidence 00 000 00000000001111 123444444443333333222 233455677776665 566654
Q ss_pred -hHHHHHHHHHHHHhhHHHHHHhhcC--Ccceeee-cchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhh
Q 016055 230 -IGMIAMVVIQIPMTLLGVLLMDKSG--RRPLLLV-SAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 230 -~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
.......++.+++.++.|+++||++ ||+.... ...+..++...+.. .. ..+...........+...
T Consensus 292 ~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~----~~------~~~~~~~~~~~~~~g~~~ 361 (452)
T PRK11273 292 SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL----NP------AGNPTVDMACMIVIGFLI 361 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH----hc------ccChHHHHHHHHHHHHHH
Confidence 4445566788889999999999994 4432211 11111122111111 00 111111111222222222
Q ss_pred ccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHH-HHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCC
Q 016055 306 LGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWI-ISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGR 383 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (396)
.+.......+..|.+|++.|++++|+.+...++|+.+ +|.+.|.+.| .++...+++..+++.+..+.. ....+.++|
T Consensus 362 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~ 440 (452)
T PRK11273 362 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL-IVVMIGEKR 440 (452)
T ss_pred HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHhccccc
Confidence 2222233356779999999999999999999998765 7999999999 455555555555544443333 333333444
Q ss_pred ChHHH
Q 016055 384 TLEEI 388 (396)
Q Consensus 384 ~~~~~ 388 (396)
+++|.
T Consensus 441 ~~~~~ 445 (452)
T PRK11273 441 HHEEL 445 (452)
T ss_pred hHHHH
Confidence 44443
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=8.6e-30 Score=236.82 Aligned_cols=349 Identities=16% Similarity=0.115 Sum_probs=220.7
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+.+++.++.|+++||+|||+++..+.++.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+++|+
T Consensus 64 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~ 143 (496)
T PRK03893 64 AFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRN 143 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 44566677788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
++.++...+.++|..+++.+++.+ +||+.|++..+..++.++....+||++++..++++.++.++..+.....+..
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (496)
T PRK03893 144 KASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHR 223 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhH
Confidence 999999999999999999988877 8999998866655555555566788776543322221111111111000000
Q ss_pred hHHHHHHHHH---HHHHHhhccchhH-------------HHh-hh-hhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-
Q 016055 161 ISEEAAEIRE---YTETLERLSEGGI-------------LEL-FQ-RKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF- 221 (396)
Q Consensus 161 ~~~~~~~~~~---~~~~~~~~~~~~~-------------~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (396)
.......... ............+ ... .+ +...+..........+...........+.|.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 303 (496)
T PRK03893 224 IINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLK 303 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 0000000000 0000000000000 000 00 001111111111111111111223445666666
Q ss_pred HHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHH
Q 016055 222 ISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVL 298 (396)
Q Consensus 222 ~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (396)
++.|.+.. .......++.+++.++.|++.||++||+.+..+..+..+..+.+... ............
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 373 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI----------GGANVWVLGLLL 373 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc----------cccHHHHHHHHH
Confidence 46677765 55566678888999999999999999988766554444333322211 011222222222
Q ss_pred HHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHH
Q 016055 299 VYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFS 363 (396)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~ 363 (396)
...+....+..+....++.|.+|++.|++++|+.+....+|..++|.+.|.+.| .++...+...+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 222333334455666788999999999999999999999999999999999998 44444444433
No 33
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.7e-29 Score=228.26 Aligned_cols=303 Identities=20% Similarity=0.259 Sum_probs=208.4
Q ss_pred hhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhh--------HHHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 11 SNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAW--------WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 11 ~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
++.++.|+++||+|||+++..+.++..++.++++++++++ .+++.|+++|++.+...+...+++.|++|+++
T Consensus 50 i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 129 (394)
T TIGR00883 50 LGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK 129 (394)
T ss_pred hHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc
Confidence 5678899999999999999999999999999999999875 47889999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHH
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~ 150 (396)
|++..++.+.+..+|.++++.++..+ +||+.|++.++..++........||+|++..++++
T Consensus 130 r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 202 (394)
T TIGR00883 130 RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK------- 202 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------
Confidence 99999999999999999998875432 79999998877766666666667776642111000
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS 229 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (396)
+++.+.+.++.++++.. ............ .........+.|.+. ++.+.+..
T Consensus 203 -------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~ 255 (394)
T TIGR00883 203 -------------------------HKKKRGPIRETLTKHRK-PFLLGLGLVIAT-TTTFYLITTYLPTYLTQTLGLSAN 255 (394)
T ss_pred -------------------------cccccCCHHHHHHhchH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCChh
Confidence 01112234445544331 122222222222 222344455666665 45566654
Q ss_pred ---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 230 ---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
.......+...++.++.+++.||++||+.+.....+..+.......... . ..+........+..+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 256 SALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL-D-------SGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh-c-------CCchHHHHHHHHHHHHHHH
Confidence 4455566788888999999999999998765444333322211111100 0 1222233333333444444
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHH-HHHHHHHHHHHHHhHHHHHhcc
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVT-LVSWLGSWIISFTFNFLMKWSS 355 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~~~~~~~ 355 (396)
...+...++..|.+|++.|+++.++.+ ....+|..++|.+.|.+.|..+
T Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 555667799999999999999999854 4456788899999999998433
No 34
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=228.10 Aligned_cols=312 Identities=15% Similarity=0.092 Sum_probs=207.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHH---h-----hchhhHHHHHHHHHHhhhhhcccccceeee
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIV---F-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIA 75 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~---~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 75 (396)
.+..+..+..+++|+++||+||||++..+.+...++.+... . .++++.+++.|+++|++.+...+...+++.
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 138 (392)
T PRK12382 59 IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGL 138 (392)
T ss_pred HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677788899999999999999999888777654332 1 357899999999999999998888889999
Q ss_pred cccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHH
Q 016055 76 EITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAAL 151 (396)
Q Consensus 76 ~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~ 151 (396)
|++|+|+|++++++.+.+.+.|..++|.+++.+ +||+.+.+..+..++........||+++ + ++
T Consensus 139 ~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~----- 206 (392)
T PRK12382 139 GLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPA------H-AG----- 206 (392)
T ss_pred hhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCC------C-cc-----
Confidence 999999999999999999999999999998776 8998777655544333332222333221 0 00
Q ss_pred HHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch-h
Q 016055 152 QRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS-I 230 (396)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (396)
++.+.++..+...... ....+... .......+.+.++++.+.+.. .
T Consensus 207 ---------------------------~~~~~~~~~~~~~~~~--~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~ 253 (392)
T PRK12382 207 ---------------------------ERPSLWSVVGLIWKPG--LGLALQGV----GFAVIGTFVSLYFASKGWAMAGF 253 (392)
T ss_pred ---------------------------cCchHHHHHHHHHHhH--HHHHHHHH----HHhHHHHHHHHHHHhcCCchhHH
Confidence 0000111111100001 11111111 122333444555555555443 4
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccc
Q 016055 231 GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGG 310 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (396)
.....+++.+++.++.|++.||+++|+.+..+..+..++...+... . +.........+.+.......+
T Consensus 254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-----------P-TAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-----------c-cHHHHHHHHHHHHHHHHhHHH
Confidence 4445566778889999999999999999887777666665554431 2 222222223333333334445
Q ss_pred hhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhh
Q 016055 311 IPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 311 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (396)
...+...|.+|+++|+++.|+.+....+|..++|.+.|.+.| .++...+...+.+.++...+
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 556778888999999999999999999999999999999999 45555555555555444443
No 35
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=2.6e-30 Score=233.89 Aligned_cols=328 Identities=18% Similarity=0.186 Sum_probs=221.2
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
..+.+++.++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++
T Consensus 62 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~ 141 (398)
T TIGR00895 62 LIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGT 141 (398)
T ss_pred HHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhch
Confidence 34567778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHH-HHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLV-QLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~-~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
+.++...+..+|..+++.+++.+ +||+.|++.++..++ ..+...++||++++...+ ++++..+..++......+
T Consensus 142 ~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 220 (398)
T TIGR00895 142 AVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQA 220 (398)
T ss_pred hHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccc
Confidence 99999999999999999998776 899999988655444 445566789988765544 333333332222211110
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHH
Q 016055 161 ISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVV 237 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 237 (396)
.+++ +..+ .+..++..+...+..++++..+....... ..............+.|++.++.+.+.. .......+
T Consensus 221 ~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 296 (398)
T TIGR00895 221 EAQS--ALPE-QKATQGTKRSVFKALFQGKTARITVLLWL-LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNF 296 (398)
T ss_pred cccc--cccc-cccccchhhHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 0000 0000 00000011112222333332232222222 2222223344556667777777777665 45566678
Q ss_pred HHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhc
Q 016055 238 IQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMS 317 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
+.+++.++.+++.||+++|+.. .......+....+... ..+........++.+.......+...++..
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 364 (398)
T TIGR00895 297 GGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGST-----------LFSPTLLLLLGAIAGFFVNGGQSGLYALMA 364 (398)
T ss_pred HHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHH-----------hhCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999988433 2222222222222210 111222233334444445555677779999
Q ss_pred ccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 318 EVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 318 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
|.+|++.|+++.|+.+....+|..++|.+.|.+
T Consensus 365 ~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 365 LFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999999999999865
No 36
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1.7e-30 Score=232.26 Aligned_cols=306 Identities=12% Similarity=0.012 Sum_probs=218.7
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc-----hhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK-----AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
+..+.+++.++.|+++||+|||+++..+.++..++.++..+.+ +++.+++.|+++|++.+...+...+++.|++|
T Consensus 43 ~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 122 (365)
T TIGR00900 43 GMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVP 122 (365)
T ss_pred HHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3445667778899999999999999999999999988888877 99999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhcc--CCChhHHhhcCChHHHHHHHHH
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI--PESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~--~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
+++|+++.++.+.+..+|.+++|.+++.+ +||+.|++.++..++..+..+.+ ||+++. ++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------- 190 (365)
T TIGR00900 123 EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS----EIQA-------- 190 (365)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc----cccc--------
Confidence 99999999999999999999999998876 89999998877666554443333 332210 0000
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS--- 229 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 229 (396)
.+++ . .++.+..+++.++++..+.......+...... .....+.|.+.++ .+.+..
T Consensus 191 -------~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 250 (365)
T TIGR00900 191 -------LSNA--V--------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFA---PAIVALFPYVQSKYLGRGSTHYG 250 (365)
T ss_pred -------cchh--H--------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHhCCchHHHH
Confidence 0000 0 00011234455666655544444333333221 1222455555554 566554
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++.+++.++.+++.||.+||+.+..+....+++....... .++........+..+.......
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~ 319 (365)
T TIGR00900 251 WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT-----------PPNFPLFLVLWFAIGVGYGPIN 319 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh-----------chhHHHHHHHHHHHHHHHHHHH
Confidence 45556667888999999999999999988776655555554444432 1113333334444455555556
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
+...++..|..|+++|+++.|+.+...+++..++|.+.|.+.|.
T Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 320 VPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778999999999999999999999999999999999998873
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=1.7e-29 Score=226.50 Aligned_cols=310 Identities=13% Similarity=0.150 Sum_probs=204.3
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+.+++.+++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|
T Consensus 46 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~ 125 (382)
T PRK10091 46 YYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKV 125 (382)
T ss_pred HHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHh
Confidence 34567778889999999999999999999999999999999999999999999999999999888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
+++++....+..+|..+++.+++.+ +||+.|++.++..++..+ ....+||.++ +.+.
T Consensus 126 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~~-------------- 187 (382)
T PRK10091 126 TAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAKG-------------- 187 (382)
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----cccc--------------
Confidence 9999999999999999999888776 899999998877665543 4455777542 0000
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAM 235 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (396)
+. +.. .+.++++..+....... ..+........+..+++.+..|.++. ......
T Consensus 188 -~~------------------~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 244 (382)
T PRK10091 188 -GL------------------REQ-FHFLRSPAPWLIFAATM---FGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLV 244 (382)
T ss_pred -CH------------------HHH-HHHhcChHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 00 000 11223333222222111 11111112222333444445677665 445666
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.++.+++.++.+++.||+++|+.+..+..+.+++.+.+.... +..+.......+...+......+.....
T Consensus 245 ~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (382)
T PRK10091 245 GLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG----------GMKTASLIFAFICCAGLFALSAPLQILL 314 (382)
T ss_pred HHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 788999999999999999999888777766666554443210 1112222222222221121222222234
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc-ccchhHHHHHHH
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-STGTFFAFSAIC 366 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-~~~~~~~~~~~~ 366 (396)
..+..|++.++.+ ..+...++|.+++|.+.|.+.| .+ +...+...+.+.
T Consensus 315 ~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~ 365 (382)
T PRK10091 315 LQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLS 365 (382)
T ss_pred HHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHH
Confidence 4444455544444 3467788999999999999999 33 334444443333
No 38
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=5e-29 Score=223.70 Aligned_cols=311 Identities=13% Similarity=0.113 Sum_probs=210.4
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 64 ~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~ 143 (394)
T PRK10213 64 TAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVP 143 (394)
T ss_pred HHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHH
Confidence 34456667888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++.++...+.++|..++|.+++.+ +||+.|++.++++++..+. ....||+|+. + +
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~-----~-~-------------- 203 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE-----P-S-------------- 203 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc-----c-c--------------
Confidence 999999999999999999999877 8999999987766655433 3346665420 0 0
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
+...+.++.++++..+............. .....+..|.+.++.|.++. ......+
T Consensus 204 ------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~ 262 (394)
T PRK10213 204 ------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQ---FAFFTYIRPVYMNLAGFGVDGLTLVLLSFG 262 (394)
T ss_pred ------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Confidence 00011234455555544433322222211 12223334666666777765 4455566
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++..+.+++.||.+ |+.+.....+.......+... .++...+....++.+.......+...+++
T Consensus 263 ~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 330 (394)
T PRK10213 263 IASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLW-----------GSDKIVATGVAIIWGLTFALVPVGWSTWI 330 (394)
T ss_pred HHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 788899999999999954 443333333222222222211 11222223333334444444555555677
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccchhHHHHHHHHhh
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGTFFAFSAICSLT 369 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 369 (396)
.+..| +++++..+......++|..+||.+.|.+.|. +....+...+.+..+.
T Consensus 331 ~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 331 TRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 78777 4566777888888899999999999999994 4333344433333333
No 39
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=7e-30 Score=236.02 Aligned_cols=334 Identities=15% Similarity=0.076 Sum_probs=223.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeeccc-CCCc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT-PKNL 82 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~ 82 (396)
.|..+.....+++|+++||+|||+++..+.+++.++++++++++|++.++++|+++|++.+...+.....+.+++ |+++
T Consensus 49 ~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~ 128 (495)
T PRK14995 49 IYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ 128 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 455666778888999999999999999999999999999999999999999999999999998888887777765 6789
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHH-------
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAA------- 150 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~------- 150 (396)
|++++++.....++|..+||.+++.+ +||+.|++...++++..+ ..+++||+|+.. +++.|.....
T Consensus 129 r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~ 206 (495)
T PRK14995 129 RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAIL 206 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHH
Confidence 99999999999999999999999888 899999998777666544 445577765321 1111211110
Q ss_pred -----HHHHhCCCcchHHHHHH-------HHH-HHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhH
Q 016055 151 -----LQRLRGADADISEEAAE-------IRE-YTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYA 217 (396)
Q Consensus 151 -----~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
.++..+...+....... ... ...+.+..++.-..+++|++.........+..... .....++.
T Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~----~~~~~~~~ 282 (495)
T PRK14995 207 LLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMIT----LVGFELLM 282 (495)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHH----HHHHHHHH
Confidence 00000000000000000 000 00011111111124566665554433333332222 23344555
Q ss_pred HHHHHH-cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHH
Q 016055 218 SSIFIS-AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLA 293 (396)
Q Consensus 218 ~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (396)
|.+++. .|.++. .......+...++.++.|++.||+|+|+.+..+..+..++...+.... . .++...
T Consensus 283 ~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~---~------~~~~~~ 353 (495)
T PRK14995 283 AQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD---F------STQQWQ 353 (495)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc---C------CCchHH
Confidence 655544 577665 556666788889999999999999999877767666655554443310 0 122222
Q ss_pred HHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 294 LVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.....++.+.......+.......+..|+++++.+.++.+...++|..+|+.+.|.+.+
T Consensus 354 ~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 354 AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333444444445555566778888999999999999999999999999999999877
No 40
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=2.8e-29 Score=225.27 Aligned_cols=326 Identities=12% Similarity=0.029 Sum_probs=210.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|..+..+..|++|+++||+|||++++.+.++.+++++.+.++++. ++.|+++|++.+...|...+++.|++|+++|
T Consensus 46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~ 122 (393)
T PRK11195 46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKL 122 (393)
T ss_pred HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 4556777888899999999999999999999999999888777664 7889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
+++.++.+....+|.++||.+++.+ .|+..+.+.+...++..+....+||+|+.... ++++..+
T Consensus 123 ~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~----------- 189 (393)
T PRK11195 123 VKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLGARRPG--QSWNPIA----------- 189 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc--cCCCHHH-----------
Confidence 9999999999999999999999988 45555555554444444555678887632110 0000000
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch---hHHHHHH
Q 016055 161 ISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS---IGMIAMV 236 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~ 236 (396)
...+. ....+.+++++..+.......+.+.... ...+..+.+. +..+.++. ......+
T Consensus 190 ---~~~~~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~lg~s~~~~G~~~~~~~ 251 (393)
T PRK11195 190 ---LLRDF-----------FHACRVLWRDKLGRFSLAGTTLFWGAGA----TLRFLVLAWAPVALGITLNQPAYLQAVVA 251 (393)
T ss_pred ---HHHHH-----------HHHHHHHHhCchhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCChhHHHHHHHHHH
Confidence 00000 0112345555555444333332222221 2222222222 23455554 5556667
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++++..+++.||.++++.+..+. ..++....+.. .++.........+.+.+.....+...+..
T Consensus 252 ~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~------------~~~~~~~~~~~~~~G~~~g~~~~~~~~~~ 318 (393)
T PRK11195 252 IGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMAL------------QHSLLPAYPLLILIGALGGFFVVPMNALL 318 (393)
T ss_pred HHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHH------------HhHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 888999999999999988887665553 22222222221 11222223333333444434445555777
Q ss_pred cccCCcCc-chhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeee
Q 016055 317 SEVFPINM-KGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKL 376 (396)
Q Consensus 317 ~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (396)
.|..|++. +|++.++.+...+++..++..+.+.+...+-...+.+.+...++...+...+
T Consensus 319 q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 319 QHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77766654 7999999999999999999999997766665555555444444444443333
No 41
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=2.6e-29 Score=231.36 Aligned_cols=345 Identities=12% Similarity=0.074 Sum_probs=219.6
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh--chhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS--KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
.|..+.+++.++.|+++||+|||+++..+.++++++++++.++ ++++.+++.|+++|++.+...+....++.|++|++
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 4556777888889999999999999999999999998887554 56888999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHh-ccCCChhHHhhcCChHHHHHHHHHHh
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLC-FIPESPRWLAKTGKGIESEAALQRLR 155 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~ 155 (396)
+|+++.++...+..+|.++++++++.+ +||+.|++.++..++..+.++ +.+|+|+... +.+++|. +..++.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~-~~i~~~- 240 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEK-KYINSS- 240 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHH-HHHHhh-
Confidence 999999999999999999999988766 799999998888776655444 4566664211 0111111 000000
Q ss_pred CCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---hH
Q 016055 156 GADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS---IG 231 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 231 (396)
. ..+..+.+++.++++.++++..+......+ ......+....|.|.++++ .+.+.. ..
T Consensus 241 -------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~ 302 (465)
T TIGR00894 241 -------------L-QGQKGSTRQSLPIKAIPKSLPVWAIWFAIF----GHFWLYTILPTYLPTFISWVLRVSGKENGLL 302 (465)
T ss_pred -------------c-ccccCCCCCCCCHHHHhcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCcChHHhHHH
Confidence 0 000001112335777777665544443332 2222345566677766654 566654 45
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcceeeec---chHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVS---AAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM 308 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
.....++.+++.++.|+++||.++|+..... .....++.............. .......+....+.+.+....
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~ 378 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL----SAAFYLTIIILTLANAVSSGP 378 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc----CCchHHHHHHHHHHHHHhhhh
Confidence 5566788899999999999998655432111 111111111111110000000 111222222222333333333
Q ss_pred cchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh---c-ccchhHHHHHHHHhhHhhee
Q 016055 309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW---S-STGTFFAFSAICSLTVLFVA 374 (396)
Q Consensus 309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 374 (396)
.+.......|..|+ .+|.+.|+.+..+.++..++|.+.|.+.+. + +...+.+.++..++..++..
T Consensus 379 ~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 379 LAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred hhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 33444555566665 899999999999999999999999988763 2 23344455544555444433
No 42
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=5.6e-29 Score=224.07 Aligned_cols=314 Identities=11% Similarity=0.082 Sum_probs=212.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|++.||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 51 ~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~ 130 (394)
T PRK03699 51 LNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRG 130 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHH
Confidence 44567788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++.+..+...++|..++|.+.+.+ +||+.|.+.+++.++..+..++ .+.|+.. +++. +++
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~--~~~~-----------~~~- 195 (394)
T PRK03699 131 SRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPALG--KHAP-----------KAD- 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCcccc--ccCc-----------ccc-
Confidence 999999888889888888877654 8999999887776655443332 2223100 0000 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~ 235 (396)
++.. ++.+ ++..+.. .+..+...........|.|.+.+ +.+.+.. ......
T Consensus 196 ----------------~~~~----~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 250 (394)
T PRK03699 196 ----------------KPVA----KEKW-GIGVLFL----AIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNF 250 (394)
T ss_pred ----------------Cccc----cccC-ChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHH
Confidence 0000 0001 1111111 12222222223455567777764 4577765 444555
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.++..+++++.++++||+++|+.+.....+..+...++.. .++........+..+....+..+...++
T Consensus 251 ~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 318 (394)
T PRK03699 251 WMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN------------TDDPSHLLYAILGLGFFSSAIYTTIITL 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH------------cCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999998876555544443333322 1122222223333444444455555567
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHh
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 371 (396)
..|..|. .+++..+......++|..++|.+.|.+.| .+....++..+++..++..
T Consensus 319 ~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 319 GSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 7777664 46778889999999999999999999998 5555555555555444433
No 43
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=2e-29 Score=229.93 Aligned_cols=352 Identities=14% Similarity=0.079 Sum_probs=218.2
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh----chhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.+..+..++.++.|+++||+|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.+...+.....+.|++|
T Consensus 69 ~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~ 148 (438)
T TIGR00712 69 AISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWS 148 (438)
T ss_pred HHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcC
Confidence 3445677788889999999999999999999999998887764 467788899999999999998888899999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
+++|++++++.+.+.++|..+++.+.+.. +||+.|++.++.+++. ++..+++||+|+....++. ++.
T Consensus 149 ~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~------ 221 (438)
T TIGR00712 149 QSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPI-EEY------ 221 (438)
T ss_pred cccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCc-hhc------
Confidence 99999999999999999999888765432 8999999988876665 4455667887753211110 000
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchh-HHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch--
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGG-ILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS-- 229 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 229 (396)
+++..+...+ + ++.+.+.++. .+..++++..+.......+... ..+....|.|.++++ .+.++.
T Consensus 222 -~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~~~ 289 (438)
T TIGR00712 222 -RNDYPDDYNE--K-----AEQELTAKEIFMQYVLPNKLLWYIAIANVFVYL----LRYGVLDWSPTYLKEVKHFALDKS 289 (438)
T ss_pred -cccccccccc--c-----cccccchHHHHHHHHccCchHHHHHHHHHHHHH----HHHHHHHhHHHHHHHccCCChhhH
Confidence 0000000000 0 0000000111 1234555555444333333222 233445566766655 466654
Q ss_pred -hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055 230 -IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM 308 (396)
Q Consensus 230 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
.......+.++++.++.|++.||+++++....+.............. ...+ ..+........+..+....+.
T Consensus 290 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~g~~~~~~ 362 (438)
T TIGR00712 290 SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVY-WMNP------AGNPLVDMICMIVIGFLIYGP 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHH-HhcC------CCchHHHHHHHHHHHHHHccH
Confidence 45566677889999999999999965443322322222111111110 0000 111111111222222222222
Q ss_pred cchhhhhhcccCCcCcchhhhHHHHHHHHHHH-HHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCC
Q 016055 309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGS-WIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETK 381 (396)
Q Consensus 309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (396)
.........|.+|++.|+++.|+.+...++++ +++|.+.|.+.| .++...+.+..++..+..+...++.+|.|
T Consensus 363 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 363 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 22223467799999999999999999988875 689999999999 45555555555555555555555555544
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=1e-28 Score=221.52 Aligned_cols=312 Identities=15% Similarity=0.161 Sum_probs=201.3
Q ss_pred hhhhhhHHHHHhhhhchhhhHHh-hHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMG-FSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
...+..++.|+++||+||||.++ .+..+..++.+++++++|++.+++.|+++|.+.+...|...++..|+.|+++|++.
T Consensus 45 ~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~ 124 (375)
T TIGR00899 45 VGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAV 124 (375)
T ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhH
Confidence 34556678999999999988765 45666677788889999999999999999988888888888888999887777654
Q ss_pred --HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 87 --TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 87 --~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
.+....+.++|..++|.+++.+ +||+.|++.++..++..+. .+++||+|++..++ +
T Consensus 125 ~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------------- 187 (375)
T TIGR00899 125 MFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA----L------------- 187 (375)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc----c-------------
Confidence 5777788889999999888776 8999999988876665544 45578876321000 0
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCCchhH---HHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFSGSIG---MIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~ 235 (396)
++.+.++.++++..+.......+.+... .....+.|.+ .++.+.++... ....
T Consensus 188 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 244 (375)
T TIGR00899 188 -------------------TRLEVRGLLASRDTRLLFVACTLMWGCN----ILYIINMPLLIIHELGLPDKLAGLMMGTA 244 (375)
T ss_pred -------------------CcchhhhhhcCcchHHHHHHHHHHHHHH----HHHHhhhHHHHHHHcCCCHHHHHHHHHHH
Confidence 0001122333444443333332222211 1222333433 34567666532 2333
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.....++.++.+++.||++||+.+..+.....+....... .++.........+.+.......+....+
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 312 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA------------DNSLWALLMLQLLNAIFIGILAGIGMLY 312 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677889999999999998776655443333222221 1122222222333333333344556678
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhh
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (396)
..|..|+ +++++.++.+...++|..++|.+.|.+.+ .++...+...+++..+..++
T Consensus 313 ~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 313 FQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 8888876 46799999999999999999999999988 44455555555544444433
No 45
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=9.9e-29 Score=224.20 Aligned_cols=317 Identities=13% Similarity=0.004 Sum_probs=211.2
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.+..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+ ..+....++.|++|+++|+++
T Consensus 65 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (408)
T PRK09874 65 LFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWA 143 (408)
T ss_pred HHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHH
Confidence 3446667789999999999999999999999999999999999999999999999865 457777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCcch
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADADI 161 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
.++...+..+|..++|.+++.+ +||+.|++.++..++..+ ..+.+||+++.. ++++
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------------- 204 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV----SKKE--------------- 204 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc----cchh---------------
Confidence 9999999999999999998876 899999998877666544 344456643110 0000
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHH-HHHHHHHHhcchhhhHHhHHHHHHHcCCCch-------hHHH
Q 016055 162 SEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVG-VGLMVLQQFGGVNGIAFYASSIFISAGFSGS-------IGMI 233 (396)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 233 (396)
..+. .+..+.++++........ ...... .......+.+.+..+.+.+.. ....
T Consensus 205 ---~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 265 (408)
T PRK09874 205 ---MLHM------------REVVTSLKNPKLVLSLFVTTLIIQV----ATGSIAPILTLYVRELAGNVSNIAFISGMIAS 265 (408)
T ss_pred ---hhHH------------HHHHHhCcCCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 0000 001122333332221111 111111 112222233333333222211 2233
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
..+++.+++.+..|++.||++||+.+..+.....++.+.... .++.........+.+.......+...
T Consensus 266 ~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (408)
T PRK09874 266 VPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSF------------VQTPLQLGILRFLLGAADGALLPAVQ 333 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH------------hccHHHHHHHHHHHHhhhHhhHHHHH
Confidence 445677788888999999999999887766655544443332 11222233333344444445556666
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhee
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVA 374 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 374 (396)
+...+..|++.+++.+++.+....+|..++|.+.|.+.+ .++...+...+++.++..++..
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 334 TLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 777888899999999999999999999999999999988 4555666666665555555443
No 46
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.8e-29 Score=221.68 Aligned_cols=340 Identities=13% Similarity=0.084 Sum_probs=234.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
++.-|.+++..+.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|..+|....+..+|.|++
T Consensus 81 s~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~ 160 (466)
T KOG2532|consen 81 SFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN 160 (466)
T ss_pred HHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH
Confidence 45566777777799999999999999999999999999998874 5567899999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhc-cCCChhHHhhcCChHHHHHHHHHHh
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCF-IPESPRWLAKTGKGIESEAALQRLR 155 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~ 155 (396)
||++..++...+..+|.+++.++++++ ||+++|++.++.+++..+++++ ..|+|..
T Consensus 161 Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~------------------ 222 (466)
T KOG2532|consen 161 ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK------------------ 222 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc------------------
Confidence 999999999999999999999988887 8999999999998888766544 5677742
Q ss_pred CCCcchHHHHHHHHHHHHHHhhc--cchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---
Q 016055 156 GADADISEEAAEIREYTETLERL--SEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS--- 229 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 229 (396)
++...++|.+.+++....++.+ .+.+++++++++..+..++..+.... ....+..|.|.++++ .+++..
T Consensus 223 -h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~----~~~~l~~y~PtY~~~VL~f~v~~~G 297 (466)
T KOG2532|consen 223 -HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNW----GFYLLLTYLPTYLKEVLGFDVRETG 297 (466)
T ss_pred -CCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHH----HHHHHHHHhhHHHHHHhCCChhhhh
Confidence 1111122222222221111111 46789999998877655554433333 456677777777664 566654
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCc--------c-eeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHH
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRR--------P-LLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVY 300 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (396)
....+..+...+..+++|.++||..+| | .-.++....++.++.+.+. . +.+.+..+....+.
T Consensus 298 ~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~---~------~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 298 FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT---S------DEHRLLAVILLTIA 368 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec---C------CCcchHHHHHHHHH
Confidence 777788899999999999999998653 1 1122333333333333321 0 01222222222222
Q ss_pred HHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH----hcccchhHHHHHHHHhhHhheeee
Q 016055 301 TGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK----WSSTGTFFAFSAICSLTVLFVAKL 376 (396)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 376 (396)
....+...+-.+.-..+. .+++.+..+|+.+....+.++++|.+.|.+.. ..+...|++.+++..+..++..++
T Consensus 369 -~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 369 -IGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -HHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 122222222222222232 55678999999999999999999999999983 244556666777766666655555
Q ss_pred c
Q 016055 377 V 377 (396)
Q Consensus 377 ~ 377 (396)
.
T Consensus 447 ~ 447 (466)
T KOG2532|consen 447 G 447 (466)
T ss_pred e
Confidence 4
No 47
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=8.7e-29 Score=228.43 Aligned_cols=332 Identities=19% Similarity=0.142 Sum_probs=220.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 54 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (471)
T PRK10504 54 YVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHH
Confidence 44566778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHH------
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQR------ 153 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~------ 153 (396)
++.++.....++|..++|.+++.+ +||+.|.+......+..+. ....|+++. ++.+.+........
T Consensus 134 ~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~ 210 (471)
T PRK10504 134 AAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATL 210 (471)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHH
Confidence 999999999999999999998877 8999999987766555443 334454431 11222222111000
Q ss_pred ---HhCCCc--chHHHHHHH---------HHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHH
Q 016055 154 ---LRGADA--DISEEAAEI---------REYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASS 219 (396)
Q Consensus 154 ---~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (396)
..+.+. ......... ....++.+..++....+++|++.++......++.... ......+.|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~ 286 (471)
T PRK10504 211 TLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG----SGMLPFMTPV 286 (471)
T ss_pred HHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 011110 000000000 0000011111111122466776665554444443332 3344555666
Q ss_pred HHHH-cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHH
Q 016055 220 IFIS-AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALV 295 (396)
Q Consensus 220 ~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (396)
+.+. .+.++. .......+..+++.++.+++.||+++|+.+..+..+..+...++..... ........
T Consensus 287 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 357 (471)
T PRK10504 287 FLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL---------LGWYYLLP 357 (471)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc---------cccHHHHH
Confidence 6654 566554 4444455667777789999999999999887777766666554443210 11111122
Q ss_pred HHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 296 GVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
......+.......+.......+..|++.+++++++.+....+|..+++.+.|.+.+
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333344556788889999999999999999999999999999999887
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=2.2e-28 Score=221.34 Aligned_cols=316 Identities=15% Similarity=0.047 Sum_probs=212.9
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+..+.+++.+.+.++++++.+++.|+++|++.+...+...+++.|++|+++|.
T Consensus 57 ~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~ 136 (406)
T PRK15402 57 YLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAI 136 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHH
Confidence 44566777888999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+..++......+|..++|.+++.+ +||+.|++.++..++..+ .....||+++.. +++
T Consensus 137 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------- 198 (406)
T PRK15402 137 KITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV----GEK-------------- 198 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc----ccc--------------
Confidence 999999888888999999888776 899999988777666544 344567664210 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~ 235 (396)
.+. ++...++++.++++..+.......+.... ......+.|.+. ++.+.++. ......
T Consensus 199 ---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~ 260 (406)
T PRK15402 199 ---LSL-----------KELGRDYKLVLKNRRFVAGALALGLVSLP----LLAWIALSPVILISGEQLSSYEYGLLQVPV 260 (406)
T ss_pred ---ccH-----------HHHHHHHHHHHcCcHHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHhCCCHHHHHHHHHHH
Confidence 000 00111334556666554443333322221 112223344443 44566654 233344
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.++.+++.++.+++.||+++|+.+..+.....++...+....... ...........++.+.......+.....
T Consensus 261 ~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~g~g~~~~~~~~~~~ 333 (406)
T PRK15402 261 FGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS-------SHAYLWLTAGLSLYAFGIGLANAGLYRL 333 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc-------cccHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 567788899999999999999988777666666655554431110 1122222223333333333333343344
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHH
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSA 364 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (396)
... .+++++++..+..+....++..+++.+.+.+.+......+.....
T Consensus 334 ~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~ 381 (406)
T PRK15402 334 TLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNL 381 (406)
T ss_pred Hhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHH
Confidence 433 345889999999999999999999999999988444443333333
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=6.3e-28 Score=216.34 Aligned_cols=308 Identities=14% Similarity=0.105 Sum_probs=206.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++.+++.+.+++++|++.+++.|+++|++.+...+...+.+.|..++++|
T Consensus 49 ~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
T PRK03633 49 SYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNR 128 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 34567778888999999999999999999999999999999999999999999999999999988888888889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-h--HHHHHHHhhHHHHHHHHHH-hccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-N--WRILALIGTIPCLVQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-~--wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++++....+.++|..+|+.+++.+ . ++...+..+.......... ...+|+++ +
T Consensus 129 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------------- 186 (381)
T PRK03633 129 GRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA------E---------------- 186 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC------C----------------
Confidence 9999999999999999999999877 1 1222222222221111111 11222110 0
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
++++.+.++.++++..+............ ......+.|.+.++.+.++. .......
T Consensus 187 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~ 245 (381)
T PRK03633 187 -----------------NHDSTSIWPMLKLRQARLGVNGCIISGIV----LGSLYGLMPLYLNHQGMSDASIGFWMALLV 245 (381)
T ss_pred -----------------CCCCCCHHHHHHhcchHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 00011233445555444332222222221 22333456766677777655 4444556
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
+..++++...+++.||+++|+.+..+.....++...... ... ..... .+.+.......|.....+
T Consensus 246 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~------------~~~--~~~~~-~l~g~~~~~~~p~~~~~~ 310 (381)
T PRK03633 246 SAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS------------QAA--MAPAL-FILGAAGFTLYPVAMAWA 310 (381)
T ss_pred HHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh------------hHH--HHHHH-HHHHHHHHhHHHHHHHHH
Confidence 788899999999999999998877666665554433221 011 11111 122222334557777888
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
.|..|+++++...+..+...++|..++|.+.|.+.| .+....+...+.+.++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 311 CEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 899998888888888888899999999999999998 44444455544444433
No 50
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1.8e-29 Score=226.82 Aligned_cols=324 Identities=17% Similarity=0.116 Sum_probs=210.9
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+
T Consensus 39 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~ 118 (379)
T TIGR00881 39 FSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERG 118 (379)
T ss_pred HHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhhe
Confidence 34556677788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH-HHhhhh----hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 85 GFTTVHQLMICIGVSMTY-LIGAFL----NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~-~l~~~l----~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
++.++.+.+..+|..+++ .++..+ +||+.|++.+++.++. ++..++.||+|+....++++++.. ++
T Consensus 119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 190 (379)
T TIGR00881 119 TWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN--------EE 190 (379)
T ss_pred eeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc--------cc
Confidence 999999999999999999 455444 8999999887766554 444556777664211111100000 00
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch---hHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS---IGMIA 234 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~ 234 (396)
.+.+ ++..+++.+..+...++.++++..+.......+.... ......+.|.+. +..+.+.. .....
T Consensus 191 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 260 (379)
T TIGR00881 191 PDGD------AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV----RTGILDWSPLYLTQEKGFSKEKASWAFTL 260 (379)
T ss_pred cccc------cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 0000 0000000011122344555565554444333333322 233444555554 34566654 45566
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
..+..+++.++.+++.||..+|+...............+..... . +..+...........+....+..+....
T Consensus 261 ~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 333 (379)
T TIGR00881 261 YELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL-N------PAANPLMDLICLFALGFLVYGPQMLIGV 333 (379)
T ss_pred HHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc-C------cchhHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 67788899999999999864433222222211111111111100 0 0111222222333333334444455567
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
+..|.+|++.|+++.|+.+...++|..++|.+.|.+.|.
T Consensus 334 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 334 IASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 889999999999999999999999999999999999984
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=1.1e-28 Score=219.59 Aligned_cols=301 Identities=23% Similarity=0.283 Sum_probs=211.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++.+++.++..+++|++.+++.|++.|++.+...+...+++.|++|+++|+
T Consensus 41 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~ 120 (352)
T PF07690_consen 41 FFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERG 120 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhh
Confidence 44566778888999999999999999999999999777777788889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++++...+.++|.+++|.+++.+ +||+.|++.+++.++..++ ..+++++|+....+++.++.
T Consensus 121 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------ 188 (352)
T PF07690_consen 121 RAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE------------ 188 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT------------
T ss_pred hccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc------------
Confidence 999999999999999999999887 8999999999888877653 34555544221111111100
Q ss_pred chHHHHHHHHHHHHHHhhccch-hHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCC-ch---hHHH
Q 016055 160 DISEEAAEIREYTETLERLSEG-GILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFS-GS---IGMI 233 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~~~~ 233 (396)
.+++++.. .+++.++++..+..........+ .......+.|.+ .+..+.+ .. ....
T Consensus 189 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (352)
T PF07690_consen 189 --------------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFF----VFSGFSFFLPLYLQEVLGFSGPSQAGLLFS 250 (352)
T ss_dssp ----------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHH----HHHHHHHHHHHHCCHHHHCCTHHHHHHHHH
T ss_pred --------------cccccccccccccccccchhhhhhhhhhHHHH----HHHHhhcccchhhhhccCCCHHHHHHHHHH
Confidence 00011111 25555555555423333333222 233455666665 5556666 33 3356
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
...+...++.++.+++.||+++|+..........+....+..... ..+.........+.+.......+...
T Consensus 251 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~ 321 (352)
T PF07690_consen 251 IFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF---------SSSPVWLIIALFLIGFGFGIVFPILF 321 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH---------HCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777788999999999999987766666555555554443211 11122222233344445555677888
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHH
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIIS 344 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 344 (396)
.+..|..|+++++++.|+.+...+++..++|
T Consensus 322 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 322 SLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999987
No 52
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=2.5e-28 Score=224.23 Aligned_cols=328 Identities=13% Similarity=0.026 Sum_probs=194.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++++++.++++++++++.+++.|+++|++.+... ....++.|++|+++|
T Consensus 79 ~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~r 157 (476)
T PLN00028 79 ASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIV 157 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhhe
Confidence 3455667788889999999999999999999999999999999999999999999999987654 455678999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh-------------hhHHHHHHHhhHHHHHHHHHHhccC-CChhHHhhcCChHHHHH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAF-------------LNWRILALIGTIPCLVQLIGLCFIP-ESPRWLAKTGKGIESEA 149 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~-------------l~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~l~~~~~~~~~~~ 149 (396)
+++.++.....++|..+++.+... .+||+.|++.+++.++..+..++++ +.|+ ++.++.+
T Consensus 158 g~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~- 231 (476)
T PLN00028 158 GTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK- 231 (476)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-
Confidence 999999976666666655443321 2799999998888776655544444 3331 0000000
Q ss_pred HHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCc
Q 016055 150 ALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSG 228 (396)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (396)
++. +.++......+++.++++..+........... .......+.|.++ ++.|.+.
T Consensus 232 ------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 232 ------KSG--------------TMPKDSFSKVLRYGVTNYRTWILALTYGYSFG----VELTMDNIIAEYFYDRFGLSL 287 (476)
T ss_pred ------hcC--------------ccccccHHHHHHHHHcCchhHHHHHHHHHHHH----HHHHHHhHHHHHHHHhcCCCH
Confidence 000 00000001123444444444333332222221 1223344455544 4457776
Q ss_pred h---hHHHHHHHHHHHHhhHHHHHHhhcCCcceee----ecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHH
Q 016055 229 S---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLL----VSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYT 301 (396)
Q Consensus 229 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (396)
. .......++.++++++.|+++||++||+... .......+..+...... . ..+........ ++.
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~--~------~~~~~~~~~~~-~l~ 358 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG--R------ANSLGAAIVVM-ILF 358 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc--c------cchHHHHHHHH-HHH
Confidence 5 4555667889999999999999998763211 11111111111111100 0 01111222222 222
Q ss_pred HHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhe
Q 016055 302 GSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (396)
+.+.....+..+++..+.. ++.+++..|+.+..+++|..++|.+.+ ..+ .++...+.+.+++.+++.++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 359 SIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 2222222334445666654 468999999998888888888887764 112 234555666655555554443
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=2.9e-27 Score=210.26 Aligned_cols=294 Identities=24% Similarity=0.295 Sum_probs=229.6
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
..+..++.++.|+++||+|||+.+..+.++..++.+...+.++++.+++.|++.|++.+...+...+++.|++|+|+|++
T Consensus 44 ~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (352)
T cd06174 44 SLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGR 123 (352)
T ss_pred HHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhh
Confidence 34556778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcch
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADI 161 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
..++.....++|..+++.+++.+ +||+.+++.++..++..+...+++
T Consensus 124 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 174 (352)
T cd06174 124 ALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL----------------------------- 174 (352)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 99999999999999999999887 799999998887766655443322
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHc-CCCch---hHHHHHHH
Q 016055 162 SEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGS---IGMIAMVV 237 (396)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~ 237 (396)
+..+.... ..+...........+.+.+.++. +.+.. .......+
T Consensus 175 ----------------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T cd06174 175 ----------------------------RLLLLLAL----AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGL 222 (352)
T ss_pred ----------------------------HHHHHHHH----HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 11111122 22222223445556666666554 55554 55666778
Q ss_pred HHHHHhhHHHHHHhhcCCcc-eeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 238 IQIPMTLLGVLLMDKSGRRP-LLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
+..++.++.+++.||++||+ .+..+..+..++....... ++.........+.+.......+....+.
T Consensus 223 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 290 (352)
T cd06174 223 GGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA------------PSLALLLVALLLLGFGLGFAFPALLTLA 290 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 89999999999999999998 7777777777776666542 2234444455556666667778888999
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhh
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (396)
.|..|+++|++.+|+.+...+++..++|.+.+.+.| .++...+.+.+.+..+..++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 291 SELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997 45555566666655555444
No 54
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=4.8e-28 Score=224.67 Aligned_cols=335 Identities=15% Similarity=0.103 Sum_probs=225.2
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+.+++.++.|+++||+|||+++..+.++..++++++++++|++.+++.|+++|++.+...+...+++.|++|+++|
T Consensus 45 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r 124 (485)
T TIGR00711 45 SYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKR 124 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHH
Confidence 34566778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHH-------
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAAL------- 151 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~------- 151 (396)
+++.++...+..+|..++|.+++.+ +||+.|++.+.++++..+ ..+..||+++. ++++.|......
T Consensus 125 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~ 202 (485)
T TIGR00711 125 GRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGS 202 (485)
T ss_pred HHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999998877 899999998877666544 34456664431 112222211100
Q ss_pred -----HHHhCCCcchHHHHHHH-H--------HHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhH
Q 016055 152 -----QRLRGADADISEEAAEI-R--------EYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYA 217 (396)
Q Consensus 152 -----~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
.+-.+.+...+.+.... . ....+.+++++....+.++++..+...+...+.... .....++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 278 (485)
T TIGR00711 203 LLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLG----LYGSFYLL 278 (485)
T ss_pred HHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHH----HHHHHHHH
Confidence 00011111011000000 0 000011111111223456666555444443333332 23344556
Q ss_pred HHHHHH-cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHH
Q 016055 218 SSIFIS-AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLA 293 (396)
Q Consensus 218 ~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (396)
|.+.++ .+.++. .......++.+++.++.|++.||++||+.+..+..+.+++...+..... +..+...
T Consensus 279 p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~ 350 (485)
T TIGR00711 279 PLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT--------PDTPFLA 350 (485)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC--------CCCCHHH
Confidence 665554 576664 4555666888899999999999999999877776666666555442100 0122222
Q ss_pred HHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 294 LVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.....++.+.......+.......+..|+++++++.|+.+...++|+.+++.+.+.+.+
T Consensus 351 ~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 351 IALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333333333333444666788899999999999999999999999999999887
No 55
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=1.8e-27 Score=215.09 Aligned_cols=302 Identities=12% Similarity=0.051 Sum_probs=208.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.+++|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|++++
T Consensus 49 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~ 128 (401)
T PRK11043 49 LFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKA 128 (401)
T ss_pred HHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHH
Confidence 35567778888999999999999999999999999999999999999999999999999888888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++..+.......+|..++|.+++.+ +||+.|++.++..++..+..++++|+++. +++
T Consensus 129 ~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------------- 189 (401)
T PRK11043 129 NRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA-----RKQ-------------- 189 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc-----ccc--------------
Confidence 9999998888888999999888776 89999998887777666555556654420 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchh---HHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSI---GMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 236 (396)
++++.++++.++++..+........... .......+.|.+.++.+.+... ......
T Consensus 190 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~ 248 (401)
T PRK11043 190 -----------------SQDALTFKQLLKSKTYLGNVLIFAACSA----AFFAWLTGSPFILEQMGYSPADIGLSYVPQT 248 (401)
T ss_pred -----------------chHHHHHHHHHcChhHHHHHHHHHHHHH----HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHH
Confidence 0001134455555544333322222211 1223344556666777777653 333445
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++....+++.||+++|+..........++...+....... ..............+.......+......
T Consensus 249 ~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
T PRK11043 249 IAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS-------HPSLVPLLIPFCVMAAANGAIYPIVVAQA 321 (401)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc-------cCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788888899999999988866555444444433322211100 11222222223333444445556665666
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.|..| ++++++.|+.+.....++..++.+.|.+.+.
T Consensus 322 ~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 322 LRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred hhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 67766 4799999999999999999999999988773
No 56
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=1.3e-27 Score=215.31 Aligned_cols=303 Identities=13% Similarity=0.167 Sum_probs=210.2
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++.+++.+.+.++++++.+.+.|++.|++.+...+...+++.|++|+++|+
T Consensus 49 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 128 (385)
T TIGR00710 49 YLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELS 128 (385)
T ss_pred HHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHH
Confidence 44566778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++.++.+....+|..+++.+++.+ +||+.|++.++..++..+ ..+..||+++.. +++
T Consensus 129 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------- 190 (385)
T TIGR00710 129 RIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE----ARI-------------- 190 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----ccC--------------
Confidence 999999999999999999998876 899999988776666544 344567654210 000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~ 235 (396)
+. ++...+.++.++++..+............ ......+.|.+.+ +.+.++. ......
T Consensus 191 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 251 (385)
T TIGR00710 191 QI---------------STYFETFLLLLKSKMFWGYALIYGASFGG----FFAFFSGAPFVYIDIMGVSPSVFGLLFALN 251 (385)
T ss_pred CH---------------HHHHHHHHHHHcCchhHHHHHHHHHHHHH----HHHHHHcChHHHHHHcCCCHHHHHHHHHHH
Confidence 00 00011234455555554443333222221 2233344454443 5676665 445556
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.++.+++.++.+++.||+++|+.+..+.....++...+....... ............+.+.......+.....
T Consensus 252 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 324 (385)
T TIGR00710 252 IIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG-------LGSWAMIIGPMMFVGIGNSMISSIAMAY 324 (385)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc-------cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999888777666666555444321100 1122222333333334344445566677
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..|..| ++++++.++.+.....++.+.+.+.+...+
T Consensus 325 ~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 325 ALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 778876 578999999999888766666666664443
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=1.8e-27 Score=214.18 Aligned_cols=290 Identities=12% Similarity=0.083 Sum_probs=196.3
Q ss_pred hhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHH
Q 016055 12 NVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQ 91 (396)
Q Consensus 12 ~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 91 (396)
..++.|+++||+|||+++..+.++.+++.+.+.++++++.+++.|+++|++.+...|...+++.|++|+++|+++.++..
T Consensus 62 ~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 141 (400)
T PRK11646 62 LGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLM 141 (400)
T ss_pred HHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 35779999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHH
Q 016055 92 LMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAE 167 (396)
Q Consensus 92 ~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (396)
...++|..+||.+++.+ +||+.|++.++..++..+ ..+..||.+. ++.+
T Consensus 142 ~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-----~~~~---------------------- 194 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-----STVR---------------------- 194 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-----cccc----------------------
Confidence 99999999999999887 999999998776665543 3344554210 0000
Q ss_pred HHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchh---HHHHHHHHHHHHhh
Q 016055 168 IREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSI---GMIAMVVIQIPMTL 244 (396)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 244 (396)
++.+.++++.++++............... ......+.|.+.++.+.++.. .....++....+..
T Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 261 (400)
T PRK11646 195 ---------TPVREGMTRVLRDKRFVTYVLTLTGYYML----AVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLY 261 (400)
T ss_pred ---------hhhHHHHHHHHcCchHHHHHHHHHHHHHH----HHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 00011244455555443332222221111 112234566666665444442 22333344444444
Q ss_pred HHHHHHh-hcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcC
Q 016055 245 LGVLLMD-KSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPIN 323 (396)
Q Consensus 245 ~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 323 (396)
..++..| |++.++.+..+..+.+++...+... + +.........+.+.......|...++..|..|++
T Consensus 262 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-----------~-~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~ 329 (400)
T PRK11646 262 PIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-----------S-NLQQLFTLICLFYIGSIIAEPARETLSASLADAR 329 (400)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----------h-hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc
Confidence 4455554 5665555555555555554444321 1 1222222222223333344566678899999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 324 MKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 324 ~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
+|++++|+.+....+|..++|.+.|.+.|.
T Consensus 330 ~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 330 ARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred cchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 999999999999999999999999999984
No 58
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=1.1e-28 Score=225.43 Aligned_cols=334 Identities=16% Similarity=0.099 Sum_probs=209.7
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHH-HHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDL-GRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
.+..++.++.|+++||+|||++++.+.++.++++++++++++++.+++ .|+++|++.+...+...+++.|+++ ++|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 445667788999999999999999999999999999999999998875 5799999998877777788889996 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhcc-CCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI-PESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
+.++.+.+..+|..++|.+++.+ |||+.|++.+++.++..+..+++ ++.++. ++.+.++.+ ...+.+ +
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~----~~~~~~-~ 216 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ--RVSKSKSKE----GLPPDG-S 216 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc--ccccccccc----cCCCCC-c
Confidence 99999999999999999888776 89999999888776654443333 322211 000000000 000000 0
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHH
Q 016055 161 ISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVV 237 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 237 (396)
.++... + ... ++..+....+.++++.++.......+... .......+.+.+.++.+.+.. ......++
T Consensus 217 ~~~~~~---~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~ 287 (455)
T TIGR00892 217 TKKLSK---K-STA-EKINRFLDFSLFTHRGFLVYLSGNVIMFL----GFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGF 287 (455)
T ss_pred cccccc---c-chh-hhhhhhcchHHhcCchHHHHHHHHHHHHH----HccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 000000 0 000 00001111235555555443333322222 223334455656666777655 44555667
Q ss_pred HHHHHhhHHHHHHhhc--CCcceeeecchHHH--HHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 238 IQIPMTLLGVLLMDKS--GRRPLLLVSAAGTC--LGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~--g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
+.++++++.+++.||. ++|+.......... ++.+.... .++...+....++.+.......+...
T Consensus 288 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~------------~~~~~~~~i~~~~~G~~~g~~~~~~~ 355 (455)
T TIGR00892 288 VDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL------------AGDYTGLVIYCIFFGLSFGSVGALLF 355 (455)
T ss_pred HHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH------------hchHHHHHHHHHHHHHHhchHHHHHH
Confidence 7788888999999973 33333322222221 11111111 12233333344444444445556677
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc-ccchhHHHHHHHHhh
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-STGTFFAFSAICSLT 369 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-~~~~~~~~~~~~~~~ 369 (396)
+++.|.+|++++++++|+.+...++|.+++|.+.|.+.| .+ +...+.+.+++.++.
T Consensus 356 ~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 356 EVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHH
Confidence 888999999999999999999999999999999999988 33 444555555444433
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=3.9e-27 Score=212.70 Aligned_cols=324 Identities=11% Similarity=0.067 Sum_probs=207.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|..+..++.+++|+++||+|||+++..+.++++++++++++++|++.++++|+++|++.+...+...+++.|++|+++|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 45566777888899999999999999999999999999999999999999999999999887777777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
++++++......+|..++|.+++.+ +||+.|++.++..++..+. .+.+||+++. +++..
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~------------- 202 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPF------------- 202 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCC-------------
Confidence 9999999999999999999998876 8999999988877766544 4557886521 00000
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---hHHHH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS---IGMIA 234 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~ 234 (396)
+. +...+++++.++++..+.......+.... ......+.|.+.++ .+.++. .....
T Consensus 203 -~~---------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~----~~~~~~~~P~~l~~~~g~s~~~~gl~~~~ 262 (413)
T PRK15403 203 -SA---------------KSVLRDFRNVFRNRLFLTGAATLSLSYIP----MMSWVAVSPVILIDAGGMTTSQFAWTQVP 262 (413)
T ss_pred -Ch---------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHH----HHHHHHhChHHHHHhcCCCHHHHHHHHHH
Confidence 00 00012345666776665544443333332 22333445655554 467665 23333
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
...+..++..+.+++.++..+++..........++..++....... .+.+........+.+.+.....|....
T Consensus 263 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-------~~~~~~~~~~~~l~~~G~~~~~p~~~~ 335 (413)
T PRK15403 263 VFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW-------PHVWLWSVLGTSLYAFGIGLIFPTLFR 335 (413)
T ss_pred HHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc-------cccHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4456666666777665444443333222223333333332211000 112221222222222233333344432
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHh
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (396)
..-+ -....+|++.++.+.....+...++...+++.+.+....+.....+..+...
T Consensus 336 ~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
T PRK15403 336 FTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVIVV 391 (413)
T ss_pred HHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 2221 1223479999999999999999999999998887666666665555544433
No 60
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=4.9e-27 Score=211.92 Aligned_cols=326 Identities=14% Similarity=0.070 Sum_probs=205.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHH---h-hchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIV---F-SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.+..+..++.++.|+++||+||||++..+.++.+++++++. + .++++.+++.|+++|++.+...+...+.+.|++|
T Consensus 56 ~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~ 135 (402)
T TIGR00897 56 LYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTK 135 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCC
Confidence 34456677888999999999999999999999998877653 3 3578889999999999998888888888899999
Q ss_pred CCcchhHHHHHHHHHHHHH-HHHHHHhhhh----hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 80 KNLRGGFTTVHQLMICIGV-SMTYLIGAFL----NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~-~~~~~l~~~l----~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
+++|++++|+.+.+.++|. +++|.+++.+ ||+..++.......+.. +..+..+|.++. ++.++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------- 204 (402)
T TIGR00897 136 QDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTP----QHMQT------- 204 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCc----ccccC-------
Confidence 9999999999999999997 5788887665 66555544333322222 223334443210 00000
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---h
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---I 230 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 230 (396)
+ ++.+ +.+..+++.++++..+......++... .......+.|.+.++.+.+.. .
T Consensus 205 ---~-----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~g~s~~~~~~ 261 (402)
T TIGR00897 205 ---R-----EKFS-----------ELGKAATILFTNPNVLLGGMVRIINTI----GLFGFAVFLPMFVAELGFSTSEWLQ 261 (402)
T ss_pred ---C-----cchh-----------hHHHHHHHHHcChhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCChhHHHH
Confidence 0 0000 001123456666655443333222222 234456677777777787765 3
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhcCCcceeee-cchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 231 GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLV-SAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
......+++.++.+..|+++||++||+.... +.....+....+.... ... .++........+..+.+.....
T Consensus 262 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~--~~~-----~~~~~~~~~~~~~~G~~~~~~~ 334 (402)
T TIGR00897 262 IWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIP--QHF-----GHSFAVALIIAIALGIFLAGYV 334 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH--Hcc-----CCcHHHHHHHHHHHHHHHHHHH
Confidence 3345567889999999999999998876532 2222222222221110 000 1122222222333333333333
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhh
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (396)
+. .....|.. +++|+++.|+.+...+++..++|.+.|.+.| .++...+++.+++..+..++
T Consensus 335 ~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 335 PL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 33 35556654 5689999999999999999999999999999 56566666666665554444
No 61
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2e-29 Score=215.46 Aligned_cols=322 Identities=17% Similarity=0.115 Sum_probs=208.6
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|....++..|++|+++|||+||+++..|..+|.++.+.+++++.+|++.++|.+.|+|++...|.++++++|.+|.++|
T Consensus 76 vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 76 VFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 46677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHH-hccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGL-CFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
++++++++.+.+.|..+|.+.+..+ .|||.|+..++++++..++. ++.+|++|- ..|+.+ ++
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg-----a~~~~~-------~~ 223 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG-----ARDEVD-------GE 223 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc-----cccccc-------cC
Confidence 9999999999999999999888877 59999999999988876654 455664421 000000 00
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
+.. ........++.+.+.+++......+......+...+.....+.+.++..+-.+.+.. ....+
T Consensus 224 ~~~------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~v 291 (493)
T KOG1330|consen 224 NKM------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGV 291 (493)
T ss_pred CcC------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhH
Confidence 000 000000111223333334333333333333333222222333333333333443333 55566
Q ss_pred HHHHHHHHhhHHHHHHhhcCCc----ceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccc
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRR----PLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGG 310 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (396)
...++.+|.+++|.++||+.|+ ....+.....+.+............... .......+.++++.-........
T Consensus 292 t~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~---~~s~~~~~il~~~g~~~~~~~~a 368 (493)
T KOG1330|consen 292 TCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFT---SSSMIFGLILFLVGETISWFNWA 368 (493)
T ss_pred HHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHhcccc
Confidence 6678899999999999995431 2222333333222222221111111110 12222222333333233333334
Q ss_pred hhhhhhcccCCcCcchhhhHHHHHHHHH-HHHHHHHHhHHHHH
Q 016055 311 IPWVIMSEVFPINMKGSAGSLVTLVSWL-GSWIISFTFNFLMK 352 (396)
Q Consensus 311 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~~~~ 352 (396)
...-+..|++|++.|.+++++...+..+ |.+-+|++.|.+.|
T Consensus 369 ~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 369 TNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred cccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 4457788999999999999999888765 55566669999998
No 62
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=6.8e-27 Score=210.76 Aligned_cols=293 Identities=16% Similarity=0.167 Sum_probs=192.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 47 ~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~ 126 (392)
T PRK10473 47 YLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRA 126 (392)
T ss_pred HHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHH
Confidence 44566777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++.++.+....+|..++|.+++.+ +||+.|++.++..++..+ ....+||+++. +++++
T Consensus 127 ~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~-------------- 189 (392)
T PRK10473 127 KVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA---RAPAA-------------- 189 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc---ccCCc--------------
Confidence 999999999999999999988766 899999998777665544 34556775421 00000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 235 (396)
. + ..+..++.++++..+.......+..... .....+.|.+ .++.|.+.. ......
T Consensus 190 ~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 248 (392)
T PRK10473 190 S--S---------------KPRENSESLLNRFFLSRLVITTLSVTVI----LTFVNTSPVLLMEQMGFSRGEYAIIMALT 248 (392)
T ss_pred c--c---------------hHHHHHHHHhCHHHHHHHHHHHHHHHHH----HHHHHhCHHHHHHHcCCCHHHHHHHHHHH
Confidence 0 0 0001123334443333222222222111 1122233333 345577665 344556
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
++..+++.++.+++.||++||+.+..+..+..++...+... ...........+...+...+. + ...
T Consensus 249 ~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~g~~~~~-~--~~~ 314 (392)
T PRK10473 249 AGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS-----------PSHAVSLFGITLICAGFSVGF-G--VAM 314 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHh-H--HHH
Confidence 67888999999999999999998877777666665555542 111122222222222222121 1 133
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..+..|.++|+ |.......++..+++.+.+.+.+
T Consensus 315 ~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 315 SQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554443 44445556677777777777776
No 63
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=1.2e-27 Score=214.87 Aligned_cols=315 Identities=14% Similarity=0.075 Sum_probs=210.3
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.+.++..++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|.+.+...+...++..|..|+++|+++
T Consensus 54 ~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (395)
T PRK10054 54 TIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKI 133 (395)
T ss_pred HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHH
Confidence 34556678899999999999999999999999999999999999999999999988888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchH
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADADIS 162 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
.++.....++|..++|.+++.+ +||..|++.++..++..+ ..+.+||+++. ++ ++
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~~-~~---------------- 192 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKA----IA-TE---------------- 192 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccc----cc-cc----------------
Confidence 9999999999999999999887 899999988777666544 33445554310 00 00
Q ss_pred HHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHH
Q 016055 163 EEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQ 239 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 239 (396)
+ + +..+.++.++++..+.......+..............|.+.. ++.+.+.. .......+..
T Consensus 193 -~-----~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ 257 (395)
T PRK10054 193 -T-----G--------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMV 257 (395)
T ss_pred -h-----h--------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh-cccchHHHHHHHHHHhhhhhe
Confidence 0 0 001124455566555554443333332222122223333222 22333333 2223333344
Q ss_pred HHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhccc
Q 016055 240 IPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEV 319 (396)
Q Consensus 240 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (396)
.......+++.||.++|+.+..+..+..++...+... .++...+.......+.......|.....+.+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~ 326 (395)
T PRK10054 258 VSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS-----------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHI 326 (395)
T ss_pred eeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc-----------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 4556677899999999988777766666665544431 12222223333344444444456667888899
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccc-hhHHHHHHHHhh
Q 016055 320 FPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTG-TFFAFSAICSLT 369 (396)
Q Consensus 320 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~ 369 (396)
.|++.++++.+..+ ...+|..+||.+.|.+.|+.+.. .+.+.+.+..+.
T Consensus 327 ~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 376 (395)
T PRK10054 327 APPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAA 376 (395)
T ss_pred CCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHH
Confidence 99999999988655 67799999999999999954444 444443433333
No 64
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=1.2e-26 Score=213.49 Aligned_cols=327 Identities=11% Similarity=0.124 Sum_probs=209.6
Q ss_pred hhhHHHHHhhhhc-----hhhhH-HhhHHHHHHHHHHHHHhh---chhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 11 SNVCFFIFWLPCA-----LWKQT-MGFSDIVCIIGWVIIVFS---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 11 ~~~~~~G~l~dr~-----Grk~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
...+++|+++||+ ||||. +..+.+..+++....++. ++++.+.+.|++.|++.+...+...+++.|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5667899999999 99885 667777777777777775 47888999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
+|+++.++...+..+|.++++.++..+ |||..|++.++..++..+..++.||+++.. ++ ++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~-~~---------- 205 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV-PK---------- 205 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc-cc----------
Confidence 999999999999999999998777655 799999998887777766656678865310 00 00
Q ss_pred CCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHH---
Q 016055 157 ADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMI--- 233 (396)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 233 (396)
+ . ++....++++.++++..+.......+..... ........+++.++.|.+......
T Consensus 206 ---~--~------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~---~~~~~~~~~~l~~~~G~s~~~~g~~~~ 265 (491)
T PRK11010 206 ---T--L------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGD---AFAMSLTTTFLIRGVGFDAGEVGLVNK 265 (491)
T ss_pred ---c--h------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 0 0 0000123455565554443333332222211 112223334444567877763322
Q ss_pred -HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchh
Q 016055 234 -AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIP 312 (396)
Q Consensus 234 -~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (396)
...++.+++.++.|+++||+++|+.+.++..+.++....+..... . ..+...+....++.....+...+..
T Consensus 266 ~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~-------~~~~~~l~~~~~l~~~~~g~~~~~~ 337 (491)
T PRK11010 266 TLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI-T-------DKNLYSMGAAVFFENLCGGMGTAAF 337 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-c-------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 334678899999999999999988765554444443332221111 0 1112122211221111111112334
Q ss_pred hhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCC
Q 016055 313 WVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 313 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
+++..+..|++.+++..++.+....+|..+++.+.|.+.|..++..++.+..++.+.+++.....++
T Consensus 338 ~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 338 VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788889999999999999999999999999999999999433443444343333333333333343
No 65
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1e-26 Score=207.00 Aligned_cols=316 Identities=16% Similarity=0.094 Sum_probs=205.5
Q ss_pred hhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-----chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 11 SNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 11 ~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
+..++.|++.||+|.|+++..+.+++++.++..+++ ++++.+++.|++.|++ +..++.....+++|+|+++||+
T Consensus 85 l~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~ 163 (462)
T PRK15034 85 LLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGS 163 (462)
T ss_pred HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHH
Confidence 444457999999999999999999999999999987 8999999999999998 7788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh----------------------hhHHHHHHHhhHHHHHHHHHHhc-cCCChhHHhhcC
Q 016055 86 FTTVHQLMICIGVSMTYLIGAF----------------------LNWRILALIGTIPCLVQLIGLCF-IPESPRWLAKTG 142 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~----------------------l~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~ 142 (396)
+.|+.....++|..+++++... .+||...++..++.++..+..++ .+|.|+
T Consensus 164 A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------ 237 (462)
T PRK15034 164 ALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS------ 237 (462)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------
Confidence 9999976666666544433321 14888887877766665544443 343321
Q ss_pred ChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH
Q 016055 143 KGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI 222 (396)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (396)
++.+..+..+.+|+++.|...+..+. .++.+..+.++.|++.+
T Consensus 238 ---------------------------------~~~~~~~~~~vlk~~~~Wllslly~~----tFG~fvg~s~~lp~~~~ 280 (462)
T PRK15034 238 ---------------------------------SRASIADQLPVLQRLHLWLLSLLYLA----TFGSFIGFSAGFAMLAK 280 (462)
T ss_pred ---------------------------------cccCHHHHHHHhCCCchhHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 00111234456666665544444333 33345556666666655
Q ss_pred HcCCCch--hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHH
Q 016055 223 SAGFSGS--IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVY 300 (396)
Q Consensus 223 ~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (396)
+.--... ....+..+...+.++++|+++||+|+++++.++.+...+.......... .+ ...+........+.
T Consensus 281 ~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-~~-----~~~~~~~~~~~~~~ 354 (462)
T PRK15034 281 TQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-GT-----GSGNFIAFYAVFMG 354 (462)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-cc-----cccHHHHHHHHHHH
Confidence 4221111 2233345678888899999999999999988888766666544333221 00 01122222222222
Q ss_pred HHHhhccccchhhhhhcccCCc---------------------CcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc-ccc
Q 016055 301 TGSFSLGMGGIPWVIMSEVFPI---------------------NMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-STG 357 (396)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-~~~ 357 (396)
.....+.-+...+-++.+.+|+ ++.|.+.|+....+.+|+++.|.+.|...+ .+ +..
T Consensus 355 l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~ 434 (462)
T PRK15034 355 LFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVG 434 (462)
T ss_pred HHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHH
Confidence 2222222233444566677764 156788999999999999999999998888 33 334
Q ss_pred hhHHHHHHHHhhHhheeee
Q 016055 358 TFFAFSAICSLTVLFVAKL 376 (396)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~ 376 (396)
.++.+.+...++..+.+..
T Consensus 435 ~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 435 AMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555443
No 66
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=1.5e-26 Score=207.66 Aligned_cols=299 Identities=16% Similarity=0.209 Sum_probs=196.8
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+.+++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+
T Consensus 35 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 114 (377)
T PRK11102 35 YILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFS 114 (377)
T ss_pred HHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 44566778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+++++.+.+..+|..++|.+++.+ +||+.|++.++..++.. +..++.||+++.. +++ +.
T Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------~~ 178 (377)
T PRK11102 115 RMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE---RRQ-------------PF 178 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc---ccC-------------CC
Confidence 999999999999999999988776 89999998877766654 3445667754210 000 00
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHH-HHHHcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASS-IFISAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~ 235 (396)
+.+ +...++++.++++..+.......+... .......+.|. +.+..+.++. ......
T Consensus 179 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~ 239 (377)
T PRK11102 179 HLR---------------TTIRNFASLFRHKRVLGYMLASGFSFA----GMFSFLTAGPFVYIELNGVSPQNFGYYFALN 239 (377)
T ss_pred ChH---------------HHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHHHcCHHHHHHHhCCCHHHHHHHHHHH
Confidence 000 001123445555444333222222211 12222223333 3444576655 455566
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.+..+++.++.+++.||+|+|+.+..+.....+....+....... ...+........+.+. .....+.....
T Consensus 240 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 311 (377)
T PRK11102 240 IVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-------LGFWALVVGVAAFVGC-VSMISSNAMAV 311 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHH-HHHhhHHHHHH
Confidence 678888999999999999999987777665444333222211100 1112222222222222 22223333456
Q ss_pred hcccCCcCcchhhhHHHHHHHH-HHHHHHHHHh
Q 016055 316 MSEVFPINMKGSAGSLVTLVSW-LGSWIISFTF 347 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~ 347 (396)
..|..| +.++++.++.+.... +|..+++.+.
T Consensus 312 ~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 312 ILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred Hhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 677766 688999998877644 5555666554
No 67
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.5e-27 Score=214.16 Aligned_cols=328 Identities=17% Similarity=0.055 Sum_probs=217.3
Q ss_pred ccccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 3 LSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 3 ~~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
..|..+.+++.+++|.+.||++..+.+....+.+++..++....+|++.+++.|++.|+.++..+|....+++.|+.++|
T Consensus 88 t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e 167 (495)
T KOG2533|consen 88 TVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE 167 (495)
T ss_pred HHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh
Confidence 46888999999999999999999999999999999999888889999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh----------hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHH
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAAL 151 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l----------~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~ 151 (396)
|++.++++.+..++|.++|++++..+ ||||.|++.++++++.. +..+++|+.|.-..- .+++|.+-..
T Consensus 168 ~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~f-l~~~ek~~~~ 246 (495)
T KOG2533|consen 168 RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWF-LTDEEKELVV 246 (495)
T ss_pred hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccc-cchHHHHHHH
Confidence 99999999999999999999998872 89999999988877764 566779999851100 0111110001
Q ss_pred HHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCc--
Q 016055 152 QRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSG-- 228 (396)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 228 (396)
++.++.+. ....++.+...+++.++++..+...++.++... ..+.+.+|.|.+.++ .+.+.
T Consensus 247 ~~~~~~~~------------~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~l----v~~~~~~~lpl~l~~~~~~s~~~ 310 (495)
T KOG2533|consen 247 ERLRESPS------------GGIENKFKWKGFKEALKDPGVWPFSLCYFFLKL----VNYGFSYWLPLYLKSNGGYSELQ 310 (495)
T ss_pred HHHHhccC------------CCcccccCHHHHHHHHhchhHHHHHHHHHHHhh----ccccHHHHHHHHHHcCCCcChHH
Confidence 11110000 000011344567777777777665555444444 456677888888777 33443
Q ss_pred -hhHHHHHHHHHHHHhhHHHHHHhhc----CCcceeeecchHHHHHH-HHHHHHHHHHhhhhcccchhhHHHHHHHHHHH
Q 016055 229 -SIGMIAMVVIQIPMTLLGVLLMDKS----GRRPLLLVSAAGTCLGC-LLAALSFLFQDLQQWIKATPFLALVGVLVYTG 302 (396)
Q Consensus 229 -~~~~~~~~~~~~~~~~~~g~l~d~~----g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (396)
.....+..++++++.+++|+++||. .+|........+..... ..+.. ...........+...
T Consensus 311 a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~------------~~~~~~~~~~~~~~~ 378 (495)
T KOG2533|consen 311 ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA------------AAVLPGAYGAFLIGP 378 (495)
T ss_pred hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh------------hccchHHhHHHHhcc
Confidence 3777888899999999999999995 34443333332222222 22221 111222222222222
Q ss_pred HhhccccchhhhhhcccCCcCcch-hhhHHHHHHHHHHHHHHHHHhHHHHH--hcccchh
Q 016055 303 SFSLGMGGIPWVIMSEVFPINMKG-SAGSLVTLVSWLGSWIISFTFNFLMK--WSSTGTF 359 (396)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~~~~~-~~~g~~~~~~~~g~~~~~~~~g~~~~--~~~~~~~ 359 (396)
.......+......++....+.|. +..+........++.++|.+...... +.....+
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 223333445556677766554443 44444445555666666666543333 3444444
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=1.2e-25 Score=202.39 Aligned_cols=317 Identities=14% Similarity=0.118 Sum_probs=188.3
Q ss_pred cchhhhhhHHHHHhhhhchhhhHH-hhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc-
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTM-GFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR- 83 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r- 83 (396)
..+.+.+.+++|+ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+...|...++..|+.++++|
T Consensus 62 ~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (393)
T PRK15011 62 VIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGRE 140 (393)
T ss_pred HHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccch
Confidence 3455556665555 9999998875 556676678888888999999887666555555557778888888888876655
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 84 -GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 84 -~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+...++.+.+.++|.+++|++++.+ |||..|++.++..++..+ ...++||.++. +.++.
T Consensus 141 ~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---------- 205 (393)
T PRK15011 141 AVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE-----LPLAT---------- 205 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC-----Ccccc----------
Confidence 3456788889999999999999877 999999998877665544 45557876521 00000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHH-HHcCCCch---hHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIF-ISAGFSGS---IGMI 233 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~ 233 (396)
+ + .+ ..++ +++............+. .......+.|.+. ++.+.+.. ....
T Consensus 206 ~-----~-----------~~----~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~~~~~~~~g~~~~ 259 (393)
T PRK15011 206 G-----T-----------LE----APRR--NRRDTLLLFVICTLMWG----TNSLYIINMPLFIINELHLPEKLAGVMMG 259 (393)
T ss_pred c-----c-----------cc----cccc--ccccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 0 0 00 0000 00111111111111111 1222334455444 44566655 3333
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
...+..+++.++.|+++||++||+.+..+.....+........ .+.+..+ ....+.+.......+...
T Consensus 260 ~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l-~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 260 TAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-----------HSPAILL-GLQLLNAIYIGILGGIGM 327 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-----------hhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 3445667788999999999999987655444333332221110 1112122 111111111111222334
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccchhHHHHHHHHhhHhheeeecC
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
.+..|..|+ +++++.++.+...++|..++|.+.|.+.|. ++...+....++. +.+++..+..|
T Consensus 328 ~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~ 391 (393)
T PRK15011 328 LYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMI-IATLFCLLRIK 391 (393)
T ss_pred HHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH-HHHHHHHHhhc
Confidence 667888886 589999999999999999999999999994 4444444434333 33444444444
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.95 E-value=6.5e-26 Score=205.76 Aligned_cols=300 Identities=12% Similarity=0.078 Sum_probs=202.9
Q ss_pred ccccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHH---HhhchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 3 LSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVII---VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 3 ~~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
..+..+..++.++.|+++||+|||+++..+.++++++++++ .++++++.++++|+++|+|.|...+..+.++.|+.+
T Consensus 68 ~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~ 147 (438)
T PRK10133 68 SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGP 147 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence 35667888889999999999999999999999999999875 468999999999999999999999999999999887
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhh------------------------------hhHHHHHHHhh-HHHHHHHHH-
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAF------------------------------LNWRILALIGT-IPCLVQLIG- 127 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~------------------------------l~wr~~f~~~~-~~~~~~~~~- 127 (396)
+++|.+.++..+..+.+|..+++.++.. .+||++|+... +..++..+.
T Consensus 148 ~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~ 227 (438)
T PRK10133 148 ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIM 227 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778899999999999888877531 15666775433 333333222
Q ss_pred HhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHh
Q 016055 128 LCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQF 207 (396)
Q Consensus 128 ~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (396)
....||.+. ++.++ +.+.....+.+++++++..+...+..++....
T Consensus 228 ~~~~p~~~~-----~~~~~---------------------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~-- 273 (438)
T PRK10133 228 LTKFPALQS-----DNHSD---------------------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGA-- 273 (438)
T ss_pred HhcCCCCCc-----ccccc---------------------------ccccchhhhHHHHHhCchHHHHHHHHHHHHHH--
Confidence 233454221 00000 00000112344566666655444333333322
Q ss_pred cchhhhHHhHHHH-HH-HcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhh
Q 016055 208 GGVNGIAFYASSI-FI-SAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDL 282 (396)
Q Consensus 208 ~~~~~~~~~~~~~-~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (396)
......|.+.+ .+ ..+.++. .......++.++++.+.+++.||+++|+.+..+..+..+.+.+..+.
T Consensus 274 --~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~------ 345 (438)
T PRK10133 274 --QTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA------ 345 (438)
T ss_pred --HHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc------
Confidence 22223344433 34 3577765 55567778999999999999999999998877765555444433321
Q ss_pred hhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 283 QQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.. ... .......+.+.....|..++...|..|++ .+++.++.. ...+|+.++|.+.|.+.|.
T Consensus 346 -----~~-~~~-~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 346 -----GG-HVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred -----CC-hHH-HHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHh
Confidence 11 111 22334455666677788888999987764 577777776 4557889999999999884
No 70
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=1.7e-25 Score=201.18 Aligned_cols=296 Identities=14% Similarity=0.085 Sum_probs=205.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh---hchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.+..+.+++.++.|++.||+|||+++..+.++++++.+++.. .++++.+++.|++.|+|.|...+..+.++.+..|+
T Consensus 46 ~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~ 125 (410)
T TIGR00885 46 AFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPE 125 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH
Confidence 455677888888999999999999999999999999988644 46899999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh------------------------------hHHHHHHHhhHHHHHHHHHHhc
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL------------------------------NWRILALIGTIPCLVQLIGLCF 130 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l------------------------------~wr~~f~~~~~~~~~~~~~~~~ 130 (396)
++|++.+++.+...++|..++|.++..+ +||++|++.+++.++..+...+
T Consensus 126 ~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~ 205 (410)
T TIGR00885 126 STATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIML 205 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887644 4999998888766655443322
Q ss_pred --cCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhc
Q 016055 131 --IPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFG 208 (396)
Q Consensus 131 --~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
.||.++ +++ ++...+.+.++.+|++..+...+..+++...+
T Consensus 206 ~~~p~~~~-------~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e-- 248 (410)
T TIGR00885 206 TKMPALNH-------SDA----------------------------KQISFSASLSRLARIRHYREGVIAQFFYVGVQ-- 248 (410)
T ss_pred hcCCCCCc-------ccc----------------------------ccccchhhHHHHHhChhHHHHHHHHHHHHHHH--
Confidence 343210 000 00001112334555655555444444443333
Q ss_pred chhhhHHhHHHHHHHcC--CCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhh
Q 016055 209 GVNGIAFYASSIFISAG--FSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQ 283 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (396)
.....+.+.+.++.+ .+.. ...........+|+++++++.||+++|+.+.+......+..++...
T Consensus 249 --~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-------- 318 (410)
T TIGR00885 249 --IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-------- 318 (410)
T ss_pred --HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--------
Confidence 233345555554432 2222 2233344677899999999999999999877776666665555544
Q ss_pred hcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 284 QWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.+..... ......+.+.....|..++...+..+++.+..+.++.... +|+.+.|.+.|.+.|.
T Consensus 319 ----~~~~~~~-~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 319 ----AGGHVGL-YCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred ----cCChHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 1222222 3333344555566688889999999987655555555544 9999999999999993
No 71
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=6.1e-26 Score=231.35 Aligned_cols=307 Identities=12% Similarity=-0.014 Sum_probs=205.4
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHH---HhhchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVII---VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.|..+.+++.+++|+++||+|||++++.+.++..+..++. ..+++++.+++.|+++|++.+...+...+++.|++|+
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 3445567777889999999999999999887766655544 3457899999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh-h------------HHHHHHHhhH-HHHHHHHHHhccCCChhHHhhcCChHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL-N------------WRILALIGTI-PCLVQLIGLCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l-~------------wr~~f~~~~~-~~~~~~~~~~~~~e~p~~l~~~~~~~~ 146 (396)
++|++++++...+.++|.++|+.+++++ . |++.+.+..+ ..++.++..+.+||+|++...+++.++
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK 214 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc
Confidence 9999999999999999999999998876 2 2333333332 333344455567887643111000000
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHH-HHHHHcC
Q 016055 147 SEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYAS-SIFISAG 225 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 225 (396)
.. . .+.....++.+++++..+...+...+.+... .....+.+ +..+..+
T Consensus 215 ------------~~---~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g 264 (1146)
T PRK08633 215 ------------YL---F-----------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFIS----QLAQANFPAYAKEVLG 264 (1146)
T ss_pred ------------cc---c-----------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH----HHHHHhhHHHHHHHhC
Confidence 00 0 0001123445565655554444333333322 22223334 3344456
Q ss_pred CCch----hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHH
Q 016055 226 FSGS----IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYT 301 (396)
Q Consensus 226 ~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (396)
.+.. .......++.+++.++.+++.||.++++.+.++.++.+++.+.+... . +........++.
T Consensus 265 ~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~ 332 (1146)
T PRK08633 265 LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-----------P-SLASVLVLFFLF 332 (1146)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-----------h-hHHHHHHHHHHH
Confidence 6544 44555667788899999999999998887777766666555555432 1 223333333444
Q ss_pred HHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 302 GSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
+.+.....+...+++.+..|++.|++++|+.+.+.++|..+++.+.+.+..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555667889999999999999999999999999888877776654
No 72
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=9.5e-26 Score=229.11 Aligned_cols=316 Identities=10% Similarity=-0.065 Sum_probs=210.2
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhh---HHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGF---SDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
|....++..+++|+++||+|||+++.. ..+...+..+.+...+|+++++++|+++|++.+...|...+++.|+++++
T Consensus 61 ~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~ 140 (1140)
T PRK06814 61 FILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD 140 (1140)
T ss_pred HHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc
Confidence 455667777889999999999998633 32333333333444589999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+|++++++.+++.++|.++||.+++++ +|++.|...++..++.++..+++|+++.- .++...+
T Consensus 141 ~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----------- 207 (1140)
T PRK06814 141 ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKID----------- 207 (1140)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec-----------
Confidence 999999999999999999999999988 89999955556566666666667765420 0000000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMI 233 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~ 233 (396)
. ... +.....++...+++..+...+...+.++.. .....+.|.+.. ..+.+.. ....
T Consensus 208 ---~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~g~~~~~~g~~~~ 268 (1140)
T PRK06814 208 ---R-NII-----------RSTITLLKYAKADKRIWLAILGISWFWLVG----AVVLSQLPLLAKETLGGDENVATLFLA 268 (1140)
T ss_pred ---c-chH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHH----HHHHHHhHHHHHHHcCCchHHHHHHHH
Confidence 0 000 000123555666666655555444443322 233334555444 3566654 5566
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHh--hh------hcccchhhHHHHHHHHHHHHhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQD--LQ------QWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
..+++.+++.++.+++.|+..+++.+..+.++.++..+.+.+...... .. ......+.+.+....++.+.+.
T Consensus 269 ~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 348 (1140)
T PRK06814 269 VFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAG 348 (1140)
T ss_pred HHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHH
Confidence 677889999999999998877776665555555444433332100000 00 0000022223333334444555
Q ss_pred ccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 306 LGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
....+...+++.+..|++.+|+++|+.+....++..+++.+.+.+.+
T Consensus 349 ~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 349 GLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677999999999999999999999999999999999999876
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=2.2e-25 Score=198.15 Aligned_cols=296 Identities=15% Similarity=0.114 Sum_probs=201.6
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+..++.++.|+++||+|||+++..+.++..++.+.+ .+++.+.+++.|++.|++.+...+....++.|++| ++|
T Consensus 43 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~ 120 (355)
T TIGR00896 43 LPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRV 120 (355)
T ss_pred HHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chh
Confidence 3456777888899999999999999999999988888877 78899999999999999999988888888899886 689
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+++.++.+.+.++|..+++.++..+ +||+.|.+.++..++... .++||.++ ++++
T Consensus 121 ~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~~~~------~~~~----------- 181 (355)
T TIGR00896 121 GLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWIPQVRR------RVAA----------- 181 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhhhcc------ccCC-----------
Confidence 9999999999999999988887665 399988776654443322 23344321 0000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
+ ++.++...++.+|++..+.......+... .+.....+.|.+.++.+.+.. .....
T Consensus 182 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~g~~~~~~g~~~~~ 240 (355)
T TIGR00896 182 N-----------------QTTTRLTPVRIWRSPLAWQVTVFFGLQSG----LYYSLIGWLPAILISHGASAATAGSLLAL 240 (355)
T ss_pred C-----------------CCCCCCCCchhhcCHhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0 00011123445555544433332222222 233445667777777777665 45566
Q ss_pred HHHHHHHHhhHHHHHHhhcC-CcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSG-RRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
..++.++++++.|++.||++ ||+.+..+..+.+++...+... .+..... ...+.+.+.....|...
T Consensus 241 ~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--~~~l~g~~~g~~~~~~~ 307 (355)
T TIGR00896 241 MQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA-----------PMHGLWA--WALVLGLGQGGAFPLAL 307 (355)
T ss_pred HHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh-----------hhhHHHH--HHHHHHHhhhhHhHHHH
Confidence 67889999999999999995 5555555555555555444432 1111111 22333444445555555
Q ss_pred hhhcccC-CcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc
Q 016055 314 VIMSEVF-PINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS 354 (396)
Q Consensus 314 ~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 354 (396)
+...+.. +++++++..++.+...+++..++|.+.|.+.|..
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 308 TLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555444 4567789999999999999999999999999843
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=1.5e-25 Score=203.75 Aligned_cols=336 Identities=13% Similarity=0.051 Sum_probs=191.3
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHH---hhchhh-HHHHHHHHHHhhhhhcccccceeeecccC-
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIV---FSKAAW-WLDLGRLLVGYGMGLLSYVVPVYIAEITP- 79 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~---~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~- 79 (396)
+..+..++.+++|+++||+|||+++..+..+.++...... .++... ......++.++..+...+.....+.++.+
T Consensus 55 ~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (420)
T PRK09528 55 NSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER 134 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH
Confidence 3455667778899999999999999887666554433221 111111 01112222233333333332223333333
Q ss_pred -CCcchhHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHHHHhccC-CChhHHhhcCChHHHHHHHHHH
Q 016055 80 -KNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCFIP-ESPRWLAKTGKGIESEAALQRL 154 (396)
Q Consensus 80 -~~~r~~~~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~~~~~~~-e~p~~l~~~~~~~~~~~~~~~~ 154 (396)
++++++..+......++|..++|.+++.+ +|+++|++.++.+++..+..++.+ |+++... .+++++
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------- 205 (420)
T PRK09528 135 VSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAK-VANALG-------- 205 (420)
T ss_pred HHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhh-hccchh--------
Confidence 24567788888888899999999998877 899999998887776665555543 3321000 000000
Q ss_pred hCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hH
Q 016055 155 RGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IG 231 (396)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 231 (396)
+++++.+.++.++.+|++..+...+..................|......+.+.+.. ..
T Consensus 206 ------------------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 267 (420)
T PRK09528 206 ------------------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYL 267 (420)
T ss_pred ------------------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Confidence 000011112234455666554433332222221111111223333333333344333 44
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccch
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGI 311 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
.....+...++.++.|++.||+++|+.+..+..+.++...++.+. .+.+ .+.....+.+.......+.
T Consensus 268 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----------~~~~-~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 268 NSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----------TGPL-EVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----------ccHH-HHHHHHHHHHHHHHHHHHH
Confidence 445556778899999999999999998877777666665555442 2222 2222233333332222334
Q ss_pred hhhhhcccCCcCcchhhhHH-HHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCC
Q 016055 312 PWVIMSEVFPINMKGSAGSL-VTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 312 ~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
...+..|.+|++.+++..+. .+....+|.+++|.+.|.+.| .++...+...+.+..+..++.....++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45778888999999988766 577788999999999999999 565666666666665555554444443
No 75
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=5.9e-26 Score=192.78 Aligned_cols=317 Identities=19% Similarity=0.194 Sum_probs=219.5
Q ss_pred HHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhh---HHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHH
Q 016055 15 FFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAW---WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQ 91 (396)
Q Consensus 15 ~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 91 (396)
+.|.+.||||.|++...++++..+-++..+++.+++ ++++.+.+.|++ |+.+.....++++|+||+++|.++|+..
T Consensus 68 ~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 68 PYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc
Confidence 589999999999999999999999999999986555 999999999997 5677888999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhhh----h---HHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHH
Q 016055 92 LMICIGVSMTYLIGAFL----N---WRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISE 163 (396)
Q Consensus 92 ~~~~lG~~~~~~l~~~l----~---wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (396)
..|+|..+...++..+ + ||....+..+..++. +..++...|.|+.....++
T Consensus 147 -~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~-------------------- 205 (417)
T COG2223 147 -AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKP-------------------- 205 (417)
T ss_pred -cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccc--------------------
Confidence 7777766655555444 6 999998887776665 4456667776632110000
Q ss_pred HHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHHHHHH
Q 016055 164 EAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAMVVIQ 239 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~ 239 (396)
..+...++.+++++.|.+.+.....+. .+..+..++|.+++ +.+.++. .......+.+
T Consensus 206 --------------~~~~~~~~v~~~~~~W~lsllY~~tFG----~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g 267 (417)
T COG2223 206 --------------QLPAQLKAVFSNKDTWLLSLLYFATFG----GFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIG 267 (417)
T ss_pred --------------cchhHHHHHhcCcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHH
Confidence 000334556666665555444443333 45556666665554 4566655 4455555677
Q ss_pred HHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhccc
Q 016055 240 IPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEV 319 (396)
Q Consensus 240 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (396)
.+.++++|+++||+|.+|.+......++++............+ ..+........+....+...-+...+-++..+
T Consensus 268 ~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~i 342 (417)
T COG2223 268 ALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGH-----GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVI 342 (417)
T ss_pred HHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccccc-----CcchHHHHHHHHHHHHHhccCcchheeechHH
Confidence 7788999999999999998888888887777776653211110 12223333333333333333344455777777
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc-ccchhHHHHHHHHhhHhheeeec
Q 016055 320 FPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-STGTFFAFSAICSLTVLFVAKLV 377 (396)
Q Consensus 320 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 377 (396)
+|+ +.|.+.|+....+.+|+..-|...+...+ .+ +...++++..+..++..+.+...
T Consensus 343 f~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 343 FPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776 56899999999999999999999999999 33 44456666666666655544433
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=4.3e-26 Score=203.87 Aligned_cols=299 Identities=17% Similarity=0.138 Sum_probs=187.0
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
.+..+.+++.++.|+++||+|||+.+..+.++..++.+++++++ +++.+++.|+++|++.+. .+....++.|++|+++
T Consensus 45 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 123 (366)
T TIGR00886 45 VPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI 123 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh
Confidence 34556677888899999999999999999999999999999999 999999999999998654 5667889999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh--------------hHHHHH-HHhhHHHHH-HHHHHhccCCChhHHhhcCChHH
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRILA-LIGTIPCLV-QLIGLCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l--------------~wr~~f-~~~~~~~~~-~~~~~~~~~e~p~~l~~~~~~~~ 146 (396)
|+++.++.....++|..+++.++..+ +||+.| +..++...+ ..+.....+|+|+.. +++
T Consensus 124 r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 198 (366)
T TIGR00886 124 QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK-----PAT 198 (366)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc-----ccc
Confidence 99999999866666666555554322 599999 443444333 344445567765311 000
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcC
Q 016055 147 SEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAG 225 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 225 (396)
.+... .+.... . +++...+.++.++++..+............ ......+.+.+.+ ..+
T Consensus 199 ~~~~~---~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g 257 (366)
T TIGR00886 199 GKLSF---KGARWS--V------------GTGALGDQLKVFRDRHTWILALLYSVTFGS----FLGVSSIFAMFFKDQFG 257 (366)
T ss_pred hhccc---cccccc--c------------cchhHHHHHHHHhccchhhHHHHHHHHHHH----HHHHHHHHHHHHHHHcC
Confidence 00000 000000 0 000001234455555544443333332222 2334445555554 446
Q ss_pred CCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch-hhHHHHHHHHHH
Q 016055 226 FSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT-PFLALVGVLVYT 301 (396)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 301 (396)
.++. .......+..+++.++.+++.||+++|+.+..+......+..++..... .. +...........
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 328 (366)
T TIGR00886 258 LSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---------SPLSLAVFIVLFVAL 328 (366)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---------CcchHHHHHHHHHHH
Confidence 6654 3455566778889999999999999988776666555544444433210 10 222222222222
Q ss_pred HHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHH
Q 016055 302 GSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLG 339 (396)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 339 (396)
........+..+....|..| +++++++|+.+..+++|
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 329 FFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 33333334556677888877 58999999999887765
No 77
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=2.4e-25 Score=200.78 Aligned_cols=300 Identities=13% Similarity=0.049 Sum_probs=197.6
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..+..++.+++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+....+..|.+++++|+
T Consensus 52 ~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 131 (394)
T PRK11652 52 YLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLR 131 (394)
T ss_pred HHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHH
Confidence 44567778888999999999999999999999999999999999999999999999999888888888889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
++.+....+..+|..++|.+++.+ +||+.|++.++..++.. +..++.||+++.. ++ +
T Consensus 132 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~------------- 193 (394)
T PRK11652 132 HANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD----AR-R------------- 193 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cc-h-------------
Confidence 999999999999999999888776 89999999877665543 3445677765210 00 0
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~ 235 (396)
+ +.+.++++.++++..+........... .......+.+.+.++ .+.++. ......
T Consensus 194 ---~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 252 (394)
T PRK11652 194 ---T--------------RVLASYRTLLSNRRFNCYLLMLIGTLA----GIAVFEACSGVLMGAVLGLSSMTVSILFILP 252 (394)
T ss_pred ---h--------------HHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHHHhChHHHHHHcCCCHHHHHHHHHHH
Confidence 0 011223445555554443333222221 122222233334444 566654 333344
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
.++.+++..+.+++.||.+++.. .......++........... ..............+.......|....+
T Consensus 253 ~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 323 (394)
T PRK11652 253 IPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWIPGWFG-------VMNVWTLLVPAALFFFGAGMLFPLATSG 323 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhc-------cccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777778888888773221 22222222222211110000 1112222222333333344456677788
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
..|..| ++++++.++.+....+|..+++.+.+.+.+.
T Consensus 324 ~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 324 AMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 888887 4789999999999999999999998887654
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=4e-24 Score=193.12 Aligned_cols=314 Identities=15% Similarity=0.108 Sum_probs=199.1
Q ss_pred hhhhHHHHHhhhhc-----hhhh-HHhhHHHHHHHHHHHHHhh---chhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 10 LSNVCFFIFWLPCA-----LWKQ-TMGFSDIVCIIGWVIIVFS---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 10 ~~~~~~~G~l~dr~-----Grk~-~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
.+..+++|+++||+ |||| .+..+.++.+++....++. ++++.+.+..++.++..+...+...+++.|+.|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 45667899999999 8765 7888888888888877776 3577788888888888899999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHh
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLR 155 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~ 155 (396)
+||+++.++...+.++|.++++.++..+ +||..|++.++..++..+..+..||+++.. +++++.
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~-------- 194 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSL-------- 194 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchh--------
Confidence 9999999999999999999998877654 899999998887766655556677765310 000000
Q ss_pred CCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHH
Q 016055 156 GADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAM 235 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (396)
+++.+.++++.+|++..+.......+....... ......+.+.++.|.++.......
T Consensus 195 --------------------~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~~~~~~g~~~ 251 (402)
T PRK11902 195 --------------------GEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGFSAGEVGIVN 251 (402)
T ss_pred --------------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCCCHHHHHHHH
Confidence 000122456677777666555544333332211 112233445556787776333332
Q ss_pred ---H-HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHH----HHHHHhhcc
Q 016055 236 ---V-VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVL----VYTGSFSLG 307 (396)
Q Consensus 236 ---~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 307 (396)
+ +..+++.++.+++.||+++|+.+..+.....+..+.+...... .++...+.... +..+.....
T Consensus 252 ~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~ 323 (402)
T PRK11902 252 KTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT--------PKHLWTMALAIGIENLCGGMGTAA 323 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3577889999999999999887665555544443333221110 11222222211 122222333
Q ss_pred ccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 308 MGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 308 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
..+....++.+.+|.+ ..+..+....++...++.+.|.+.| .++...+...+.+..+.
T Consensus 324 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 324 FVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 3444556666666654 4455666667777767778999999 44444444444444343
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=7.5e-25 Score=197.92 Aligned_cols=331 Identities=11% Similarity=-0.003 Sum_probs=206.4
Q ss_pred cccchhhhhhHHHHHhhhhch-hhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeee-------
Q 016055 4 SFHSDLLSNVCFFIFWLPCAL-WKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIA------- 75 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~G-rk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~------- 75 (396)
.+..+.+++.+++|+++||+| ||+++..+.++.+++..+..+.++++.+.+.|++.|++.+...+...+...
T Consensus 46 ~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g 125 (418)
T TIGR00889 46 STGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAG 125 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcC
Confidence 345667778888999999996 488889899998888888889999999999999999987766665554422
Q ss_pred -cccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHH
Q 016055 76 -EITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 76 -~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~ 150 (396)
|......|.+..| .+|.+++|.+++.+ .|+ +|++.++..++..+..+.+||+|+. ++++++
T Consensus 126 ~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~---- 191 (418)
T TIGR00889 126 LDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTLPDIPVA---KSTAKM---- 191 (418)
T ss_pred CCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcCCCCCCC---cccccc----
Confidence 2233334555554 25666666666655 344 4556555555555556678887631 000000
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCc--
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSG-- 228 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (396)
+ . ++..+.+.++.+|++.++......++.... ......+.+.+.++.+.++
T Consensus 192 ---------~-------~-------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~ 244 (418)
T TIGR00889 192 ---------S-------I-------KVMLGLDAFILFKNKRMAIFFFFSMLLGAP----LQITNIFGNGFLHEFGRNPEF 244 (418)
T ss_pred ---------C-------H-------HHHhhhhHHHHhcCCCeeeHHHHHHHHHhH----HHHHHHhHHHHHHHhcccccc
Confidence 0 0 000011234455666554444443333221 1222334444455544332
Q ss_pred ---------hhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHH
Q 016055 229 ---------SIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLV 299 (396)
Q Consensus 229 ---------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (396)
........+..+++.+..+++.||+|+|+.+..+.++..++...+.... . +......+....+
T Consensus 245 ~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~---~-----~~~~~~~l~l~~~ 316 (418)
T TIGR00889 245 ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD---P-----EYFGYALLFLSMI 316 (418)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC---c-----chhhHHHHHHHHH
Confidence 2455556678888899999999999999998888777766655444310 0 0111222233333
Q ss_pred HHHHhhccccchhhhhhcccCCcCcchhhhHHHH-HHHHHHHHHHHHHhHHHHHh-c------ccchhHHHHHHHHhhHh
Q 016055 300 YTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVT-LVSWLGSWIISFTFNFLMKW-S------STGTFFAFSAICSLTVL 371 (396)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~~~~~-~------~~~~~~~~~~~~~~~~~ 371 (396)
+.+.......+....++.|.+|++.|++++|+.+ ....+|..++|.+.|.+.|. + +...+...+++..+.++
T Consensus 317 l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~ 396 (418)
T TIGR00889 317 VYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAV 396 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHH
Confidence 3333333445566688999999999999999997 56789999999999999984 2 23455566666666666
Q ss_pred heeeecCCCCCC
Q 016055 372 FVAKLVPETKGR 383 (396)
Q Consensus 372 ~~~~~~~~~~~~ 383 (396)
+..++.+|+++.
T Consensus 397 l~~~~~~~~~~~ 408 (418)
T TIGR00889 397 LFMIFFKYSHNA 408 (418)
T ss_pred HHHHHhCCcccC
Confidence 666666765443
No 80
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.5e-24 Score=194.47 Aligned_cols=311 Identities=14% Similarity=0.032 Sum_probs=207.3
Q ss_pred cchhhhhhHHHHHhhhhchhhhHH----hhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTM----GFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
.....++.+++|+++||+|||+.. ..+..+..+ ..+..+++++.+++.|+++|.+.+...|...++..|+ ++
T Consensus 49 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~ 124 (382)
T TIGR00902 49 LIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HH
Confidence 344556677899999999985433 333322222 2445678999999999999999888889888887664 46
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+|++..+......++|.+++|++++.+ |||..|.+......+..... .++|+++. +++++.
T Consensus 125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~---------- 189 (382)
T TIGR00902 125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGF-LIKPTIPP----KDAIPE---------- 189 (382)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HcCCCCCC----Cccccc----------
Confidence 789999999999999999999988877 89999988665433333333 33443210 000000
Q ss_pred CcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHH
Q 016055 158 DADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
+++.+..+.++.+|++..+.......+.... ......+.+.+.++.|.++. .....
T Consensus 190 -----------------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~----~~~~~~~~~~~l~~~g~s~~~~g~l~~~ 248 (382)
T TIGR00902 190 -----------------DESQGDSAFIALLKNPMNLRFLAAVCLIQGA----HAAYYGFSAIYWQAAGISASATGLLWGI 248 (382)
T ss_pred -----------------cccccchhHHHHHcChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHhHHHHHHHH
Confidence 0001122356677777666555544443332 23333455656667787775 34444
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
..+..+++..+.+++.||+++|+.+.++.+...+....+.. .++...+....++.+.......+....
T Consensus 249 ~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~q~l~g~~~~~~~~~~~~ 316 (382)
T TIGR00902 249 GVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA------------IEAFPLIFLLQILHCGTFAVCHLAAMR 316 (382)
T ss_pred HHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh------------HhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55777888889999999999999988888888777766654 223333333334444444445555667
Q ss_pred hhcccCCcCcchhhhHHHHH-HHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhh
Q 016055 315 IMSEVFPINMKGSAGSLVTL-VSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLT 369 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (396)
++.+. |+++|++++++++. ...+|..++|.+.|.+.|..+...++..+.+.++.
T Consensus 317 ~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (382)
T TIGR00902 317 YIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIAAAA 371 (382)
T ss_pred HHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 88887 99999999999874 56799999999999999954555566666655543
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=1.9e-24 Score=197.88 Aligned_cols=336 Identities=12% Similarity=0.024 Sum_probs=202.2
Q ss_pred hhhhhhHHHHHhhhh-chhhhHHhhHHHHHHHHHHHHHhhchhhH-HHHHHHHHHhhhhhcccccceeeecccCCC--cc
Q 016055 8 DLLSNVCFFIFWLPC-ALWKQTMGFSDIVCIIGWVIIVFSKAAWW-LDLGRLLVGYGMGLLSYVVPVYIAEITPKN--LR 83 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr-~Grk~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r 83 (396)
......+++|+++|| +||||++..+.++++++++.++++++... ++++|+++|+|.|...|...+++.|.+|++ +|
T Consensus 62 ~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~ 141 (489)
T PRK10207 62 LVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRL 141 (489)
T ss_pred HHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhh
Confidence 344555689999999 99999999999999999999999877554 558999999999999999999999999877 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHh--hcCC-hHHHHHHH-----
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLA--KTGK-GIESEAAL----- 151 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~--~~~~-~~~~~~~~----- 151 (396)
+++.+++..+.++|..+||.+++++ |||+.|++.++..++.++.....++..+... .+++ .|.....+
T Consensus 142 ~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~ 221 (489)
T PRK10207 142 DGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS 221 (489)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH
Confidence 7789999999999999999988887 9999999865544433433333332211000 0011 11111000
Q ss_pred -------HHHhCCCcchHHHHHHHHHH-----HHHHhhccchhHHHhhhhhhhhHHHHH--HHHHHHHHhcchhhhHHhH
Q 016055 152 -------QRLRGADADISEEAAEIREY-----TETLERLSEGGILELFQRKYAHSLIVG--VGLMVLQQFGGVNGIAFYA 217 (396)
Q Consensus 152 -------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 217 (396)
....+.. +........... --.++.+. .+.+|++......+. ..+.+.......+..+.+.
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~f~~~~~~~----~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~ 296 (489)
T PRK10207 222 VVMIFVCAWLMHNV-EVANLVLIVLSIVVTIIFFREAFKL----DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFA 296 (489)
T ss_pred HHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 0000000 000000000000 00000000 133344333222211 2222232222223333333
Q ss_pred HHHHHHc--CC--CchhHHHHHHHHHHHHhhHHHHHHhhcCCcce-------eeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 218 SSIFISA--GF--SGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPL-------LLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 218 ~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
+...+.. |+ .+........+..++..++.+++.||.++|+. +.++.++.+++.+.+.......... .
T Consensus 297 ~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~--~ 374 (489)
T PRK10207 297 INNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADA--Q 374 (489)
T ss_pred HHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C
Confidence 3211111 22 22344444556676778888999999998863 5566666666654443211111100 0
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
...+.+.++...++.+.......|....++.+..|++.++.++|+.+...++|+.++..+....
T Consensus 375 ~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 375 GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1223344555666667777777888889999999999999999999999999999998887654
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=2.2e-24 Score=194.53 Aligned_cols=327 Identities=13% Similarity=0.099 Sum_probs=196.0
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHH---Hhhc-----hhhHHHHHHHHHHhhhhhcccccceeeec
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVII---VFSK-----AAWWLDLGRLLVGYGMGLLSYVVPVYIAE 76 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~---~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 76 (396)
+..+..++.++.|+++||+|||+.++.++...+++.... .+.+ .+..+.+.|++.|++.+...+....+..|
T Consensus 47 ~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 126 (396)
T TIGR00882 47 ISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEK 126 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH
Confidence 344566777889999999999999998777665544322 1222 23345667888898888888887777666
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHHHHhc-cCCChhHHhhcCChHHHHHHHH
Q 016055 77 ITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCF-IPESPRWLAKTGKGIESEAALQ 152 (396)
Q Consensus 77 ~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~ 152 (396)
..+ ++++..+......++|..++|.+++.+ +||.+|++.+++.++..+..+. .||+|+. ++.++.
T Consensus 127 ~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 195 (396)
T TIGR00882 127 VSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVANA-- 195 (396)
T ss_pred hhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhcc--
Confidence 432 345566777777788888888888766 9999999988877766544444 4444321 000000
Q ss_pred HHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---
Q 016055 153 RLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS--- 229 (396)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 229 (396)
.+ ++.++.+.++.++.+|++..+......................|.+...++.+.+..
T Consensus 196 --~~----------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g 257 (396)
T TIGR00882 196 --LG----------------ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFG 257 (396)
T ss_pred --cc----------------cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHH
Confidence 00 000111123456677776654443332222221111111222333322222233332
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+...++....+++.||+++|+.+.++..+.++........ .+.+.. ....++.+.......
T Consensus 258 ~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~-----------~~~~~~-~~~~~l~g~~~~~~~ 325 (396)
T TIGR00882 258 YVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA-----------TTALEV-VILKMLHAFEVPFLL 325 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc-----------CChHHH-HHHHHHHHHHHHHHH
Confidence 33444556777788899999999999998877776666655443321 222222 222233332222222
Q ss_pred chhhhhhcccCCcCcchhhhHH-HHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhh
Q 016055 310 GIPWVIMSEVFPINMKGSAGSL-VTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (396)
.....+..+..|++.+++..+. .+....+|..++|.+.|.+.| .++...+.+.+++..+.+++
T Consensus 326 ~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 326 VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 2333566777888888887776 677889999999999999999 56666676666666655544
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.93 E-value=3.8e-25 Score=184.21 Aligned_cols=314 Identities=13% Similarity=0.053 Sum_probs=183.3
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
+-.++++.+|.++||+|||+++++|++..+++.++.+.+.|+..+++.|++.|+..|. .....++++|.+++|+|++.+
T Consensus 80 lQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~r~l~m 158 (451)
T KOG2615|consen 80 LQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKYRPLGM 158 (451)
T ss_pred HHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhhcccee
Confidence 3456677899999999999999999999999999999999997777779999998755 567789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhH------HHHHHH----hhHHHHH-HHHHHhccCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 88 TVHQLMICIGVSMTYLIGAFLNW------RILALI----GTIPCLV-QLIGLCFIPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 88 ~~~~~~~~lG~~~~~~l~~~l~w------r~~f~~----~~~~~~~-~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
+.....+++|.++||.+|+++.- +++|.. ..+.... .....+++||+-+...++ ++.... ++.
T Consensus 159 s~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~---~~~~~~-~~~-- 232 (451)
T KOG2615|consen 159 SLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN---DEHSTL-QEA-- 232 (451)
T ss_pred eeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc---ccccch-hhh--
Confidence 99999999999999999999821 222332 2222222 234567789984321111 111000 000
Q ss_pred CCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhH---HHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCCch---
Q 016055 157 ADADISEEAAEIREYTETLERLSEGGILELFQRKYAHS---LIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFSGS--- 229 (396)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 229 (396)
. ++..+.... +...--...|++.... .+-.+.+..+.+...+....++...+ .+..++++.
T Consensus 233 -~----~~~~~~~~~-------~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 233 -A----DDRLALLKF-------ARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred -h----hhhhhhcch-------hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 0 000000000 0000001111211111 11111222222222223333333333 234566555
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcC--CcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSG--RRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (396)
......++.+.+......+..||.. .+-.+..+...+.-..+.+.. ......+.....+..+....
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~------------~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL------------ARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc------------cccchhhhHHHHHHHHHHHH
Confidence 3334444444444444444444433 121222222222222222221 22233344444444444444
Q ss_pred ccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 308 MGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 308 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..+....++....|.++||+.+|+..+.+.++.++||.+.|.+..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 555666889999999999999999999999999999999998887
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=5.4e-24 Score=190.90 Aligned_cols=310 Identities=13% Similarity=0.040 Sum_probs=195.7
Q ss_pred ccchhhhhhHHHHHhhhhchhh----hHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 5 FHSDLLSNVCFFIFWLPCALWK----QTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
+..+..++.+++|+++||+||| +.+....... .......+++++.+++.|++.|++.+...|...++..++ +
T Consensus 48 ~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~ 123 (382)
T PRK11128 48 GLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--Q 123 (382)
T ss_pred HHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--H
Confidence 3445567778899999999984 3333222222 223344468899999999999999999999888877776 3
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
++|++..+......++|..+||++++.+ |||..|++.++..++..+.....||+++ ++++++
T Consensus 124 ~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------- 189 (382)
T PRK11128 124 KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP----QGESRQ---------- 189 (382)
T ss_pred hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----cccccc----------
Confidence 5678888888888889999999999877 9999998877654444444444454321 000000
Q ss_pred CCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHH
Q 016055 157 ADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMI 233 (396)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 233 (396)
++++...++++.+|++..+......++..... .....+.+.+.++.|.+.. ....
T Consensus 190 ------------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~g~s~~~~g~~~~ 247 (382)
T PRK11128 190 ------------------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSH----AAYYGFSAIYWQAAGYSASTIGYLWS 247 (382)
T ss_pred ------------------ccccccchHHHHHcChhHHHHHHHHHHHHHHh----HhHHHHHHHHHHHCCCCHhHHHHHHH
Confidence 00011235677777776666555444443322 2223334445566777665 3333
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
...+..++...+.+++.||+++|+.+..+....++....+.. .++...+....++.+.......+...
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS------------TTALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh------------hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777888999999999999887777766665554443 22222223333333333333345555
Q ss_pred hhhcccCCcCcchhhhHHHHHH-HHHHHHHHHHHhHHHHHhcccchhHHHHHHHH
Q 016055 314 VIMSEVFPINMKGSAGSLVTLV-SWLGSWIISFTFNFLMKWSSTGTFFAFSAICS 367 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 367 (396)
.+..+. +++++++..+..+.. ...|..++|.+.|.+.|..+...++..+++..
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~~~~~~~~~~ 369 (382)
T PRK11128 316 RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGVFWVMALVAL 369 (382)
T ss_pred HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 667676 566678888888744 56777899999999999544444544444443
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=2.9e-24 Score=191.15 Aligned_cols=292 Identities=14% Similarity=0.057 Sum_probs=190.7
Q ss_pred hHHHHHhhhhc-----hhhhH-HhhHHHHHHHHHHHHHhh---chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 13 VCFFIFWLPCA-----LWKQT-MGFSDIVCIIGWVIIVFS---KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 13 ~~~~G~l~dr~-----Grk~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+++|+++||+ ||||. ++.+.++.++.....++. .+.+.+....++.+++.+...+...+++.|++|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67899999998 89887 467777788777777776 4666677788888998888999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----h--------HHHHHHHhhHHHHHHHHHHhc-cCCChhHHhhcCChHHHHHH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----N--------WRILALIGTIPCLVQLIGLCF-IPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~--------wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~ 150 (396)
+++.++...+.++|.++++.++..+ + ||..|++.++..++..+..++ .||+++. ++++
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-----~~~~---- 188 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-----ASVP---- 188 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-----cccc----
Confidence 9999999999999999999998766 6 999999988877776555443 5664310 0000
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchh
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSI 230 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (396)
+++ +++.+.++++.++++..+..........+... .......+.+.+.++.|.++..
T Consensus 189 -----------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~ 245 (356)
T TIGR00901 189 -----------KPL-----------TQAVLKPIREFFQRKNMIQALLLLLLIVLYKL-GDSAATVLTTLFLLDMGFSKEE 245 (356)
T ss_pred -----------hhH-----------HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHH
Confidence 000 00011234555555542222222222222222 2333445555555567777764
Q ss_pred HHHHH---H-HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 231 GMIAM---V-VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 231 ~~~~~---~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
..... + +..+++.++++++.||+|+|+.+..+.++.++......+......+.+. ..+....+....++.+....
T Consensus 246 ~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~ 324 (356)
T TIGR00901 246 IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGI-TFPHLLMLFLTITLEAVTGG 324 (356)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-ccchHHHHHHHHHHHHHHhH
Confidence 33222 2 4567889999999999999988777776665554443332110000000 00122333333334444455
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHHHHHH
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVTLVSW 337 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 337 (396)
...+...++..|.+|+++|++.+|+.+...+
T Consensus 325 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 325 LGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5667778999999999999999999887654
No 86
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=5.2e-24 Score=194.44 Aligned_cols=317 Identities=17% Similarity=0.146 Sum_probs=217.7
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-----chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.++..+++|.++||++|||+++.+.++.++..+..++. .+.+.+++.-++.|++.+...|.-++++.|..|+++.
T Consensus 58 ~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L 137 (524)
T PF05977_consen 58 ILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDL 137 (524)
T ss_pred HHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhH
Confidence 34556679999999999999999998877665544432 4788899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
..+.++.+...++..++||.+++.+ |-.+.|.+.++..++.+......++.++ + +..+.++.
T Consensus 138 ~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~-~~~~~e~~--------- 203 (524)
T PF05977_consen 138 PAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----P-SSLPRERF--------- 203 (524)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----c-cccchhhh---------
Confidence 9999999999999999999999887 7778888887765555444443332210 0 00000000
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAM 235 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~ 235 (396)
.+.-+..++-..+++..+..+....+..+. .......+|.+.+ ..+.++. ......
T Consensus 204 ----------------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~ 263 (524)
T PF05977_consen 204 ----------------FSALREGLRYVRSSPPLRSVLLRSFLFNLF----ASAVWALLPLFARDVLGGGASGYGLLLAAF 263 (524)
T ss_pred ----------------hhhHHHHHHHHhcchHHHHHHHHHHHHHHh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHH
Confidence 000111233333344444433332222221 1222233455543 3455554 566677
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhh
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVI 315 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (396)
+++.++|.++.+++.+|+++++.+..+.+..+++.+.+.+ ..+.+......++.+...........+.
T Consensus 264 gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal------------~~~~~~~~~~l~l~G~~~~~~~~~~~t~ 331 (524)
T PF05977_consen 264 GVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL------------SPSFWLALIALFLAGAAWIIANSSLNTL 331 (524)
T ss_pred HHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc------------chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999998888887777777776666665 3333444444455555555556666788
Q ss_pred hcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHh
Q 016055 316 MSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 316 ~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 371 (396)
..+..|++.||++++++++....+..+|..+.|.+.+ .+....+.+.++...+..+
T Consensus 332 ~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 332 VQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 4444444444443333333
No 87
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=2.1e-24 Score=197.64 Aligned_cols=299 Identities=15% Similarity=0.061 Sum_probs=194.6
Q ss_pred hhhhhhHHHHHhhhh----chh-hhHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeec
Q 016055 8 DLLSNVCFFIFWLPC----ALW-KQTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAE 76 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr----~Gr-k~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 76 (396)
.-++..|+.|+++|| +|| |+.++.+....+++.+++.+.++ ...+++.+++.+++.+...+...++..|
T Consensus 47 ~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 126 (437)
T TIGR00792 47 LDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPA 126 (437)
T ss_pred HHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCccc
Confidence 345677889999997 687 45677888888888888877654 4566778889999988888888888999
Q ss_pred cc-CCCcchhHHHHHHHHHHHHHHHHHHHhhh-----------hhHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCC
Q 016055 77 IT-PKNLRGGFTTVHQLMICIGVSMTYLIGAF-----------LNWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGK 143 (396)
Q Consensus 77 ~~-~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-----------l~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~ 143 (396)
.. ++++|++..++.+.+..+|..+++.+... .+||+.+.+.++++++..+. .+..+|+++. +
T Consensus 127 ~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~ 201 (437)
T TIGR00792 127 ITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSE-----I 201 (437)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----C
Confidence 87 46889999999888888877665544321 27999998888877666544 4556765410 0
Q ss_pred hHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH
Q 016055 144 GIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS 223 (396)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (396)
+++. +++...++.++++++++.++.......+....... ...+.+++.+.
T Consensus 202 ~~~~--------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 251 (437)
T TIGR00792 202 PKNI--------------------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI----KNGVQVYYFTY 251 (437)
T ss_pred Cccc--------------------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH----HcchhheeEee
Confidence 0000 00000122345566666665554444443332221 12222322222
Q ss_pred cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHH
Q 016055 224 AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVY 300 (396)
Q Consensus 224 ~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (396)
...++. .......+..+++.++.+++.||+|+|+.+..+..+.+++.+.+.+. ..+........++
T Consensus 252 ~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 320 (437)
T TIGR00792 252 VLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-----------GSNLPLILVLIIL 320 (437)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----------chhHHHHHHHHHH
Confidence 111222 34445567888899999999999999998887777666665554431 1122222333333
Q ss_pred HHHhhccccchhhhhhcccCC-------cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 301 TGSFSLGMGGIPWVIMSEVFP-------INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+.......+..+++.+|..| ++.+|+..|+.+....+|..+++.+.|.+.+
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 321 AGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445666778887765 4567999999999999999999999999988
No 88
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=1.8e-25 Score=187.22 Aligned_cols=319 Identities=13% Similarity=0.013 Sum_probs=218.4
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc-chhH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL-RGGF 86 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~ 86 (396)
.-++..|+.|.+.||+|+|..+++|+++...+++++++.++|+++++.|.+||+|.+...+...++++|.+|+++ |+++
T Consensus 118 ~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~v 197 (464)
T KOG3764|consen 118 VQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSV 197 (464)
T ss_pred HHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHH
Confidence 345566789999999999999999999999999999999999999999999999999999999999999999765 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchH
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADIS 162 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
+|+...+.++|.++||+.++.+ |.+.+|++.++++++...+.+++-|..+-
T Consensus 198 mGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~------------------------- 252 (464)
T KOG3764|consen 198 MGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM------------------------- 252 (464)
T ss_pred HHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc-------------------------
Confidence 9999999999999999999988 99999999999999887777665443210
Q ss_pred HHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcC---CCchhHHHHHHHHH
Q 016055 163 EEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAG---FSGSIGMIAMVVIQ 239 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 239 (396)
+.++..+..++++++++++........... +.+....-+.+...+.++.. ...........+..
T Consensus 253 ----------~~~~~~~~~~~~~Ll~dP~I~~~agai~~~---n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y 319 (464)
T KOG3764|consen 253 ----------DPDSTEQGTPMWSLLMDPYILLIAGAITFS---NSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSY 319 (464)
T ss_pred ----------CccccccCccHHHHHhCchHhhhhcchhhc---cchHHHhCcccHHHHHHhccCCCcceeeeecccccch
Confidence 000123344677777776654333322222 22212222222222333333 23336667777889
Q ss_pred HHHhhHHHHHHhhcCCcceee--ecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhc
Q 016055 240 IPMTLLGVLLMDKSGRRPLLL--VSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMS 317 (396)
Q Consensus 240 ~~~~~~~g~l~d~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
.+++.+.|.+.||+++.+.+. .+.+..+.++....+.... ...+.......+..+.......|.. .+..
T Consensus 320 ~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~--------~~L~vp~~~l~~~i~~~dasl~P~l-~~lv 390 (464)
T KOG3764|consen 320 AIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSI--------AQLWVPNFGLGFGIGLADASLIPTL-GYLV 390 (464)
T ss_pred hccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhH--------HHHhhhhHHHHHHHHHHHHHHhhhh-HHhc
Confidence 999999999999999543332 2222223222222221000 1112222222222222233333444 4444
Q ss_pred ccCCcC---cchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhe
Q 016055 318 EVFPIN---MKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 318 ~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (396)
|....+ ..|...++......+|.++||.++|.+.+ .+..+...+.+....+.+-++
T Consensus 391 d~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 391 DPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred chhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHH
Confidence 544444 67889999999999999999999999998 777777777776666655443
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=5.8e-25 Score=199.63 Aligned_cols=346 Identities=18% Similarity=0.177 Sum_probs=232.3
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHH-HHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLG-RLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
+...+..|+.+.+.||+|.|++.+.|.++..++.++.+|++++|++++. -++.|+|.|..+.....++..+++ |+|+.
T Consensus 92 ~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~l 170 (509)
T KOG2504|consen 92 GVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRAL 170 (509)
T ss_pred HHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHH
Confidence 4455667889999999999999999999999999999999999988875 588999999999999999998876 67999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhcc-CCChhHHhhcCChHHHHHHHHH-------
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFI-PESPRWLAKTGKGIESEAALQR------- 153 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~l~~~~~~~~~~~~~~~------- 153 (396)
+.|+...+.++|.++-|.+..++ |||+.+++.+.+.+-.+.....+ |.+++.... .++..+...+
T Consensus 171 A~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~~~~~~~~~~~~~~~~~ 247 (509)
T KOG2504|consen 171 ATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN---EEKDLRNSAASVESTPK 247 (509)
T ss_pred HHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---hhhhhcccccccccccc
Confidence 99999999999999998888877 99999999777766555444333 322211000 0000000000
Q ss_pred -----HhCCCcchHH----HHHHHHHHHHHHh-hccchhH----HHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHH
Q 016055 154 -----LRGADADISE----EAAEIREYTETLE-RLSEGGI----LELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASS 219 (396)
Q Consensus 154 -----~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (396)
....+....+ +..+.++..++.. ...+... .++++++.+..... ........+.....+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~----~~~~~~~g~~~p~~~l~~ 323 (509)
T KOG2504|consen 248 PVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLAL----SNLFAYLGFNVPFVYLPS 323 (509)
T ss_pred ccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000000000 0111111 45666644433333 333333356677778888
Q ss_pred HHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcc--eeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHH
Q 016055 220 IFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRP--LLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLAL 294 (396)
Q Consensus 220 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
+.++.+.+.. ......++..++++++.|+++|+...++ ...++.+..+++...... .+....+
T Consensus 324 ~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~------------~~~~~~l 391 (509)
T KOG2504|consen 324 YAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF------------ATTYVGL 391 (509)
T ss_pred HHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH------------hccHHHH
Confidence 8888888766 6777788999999999999999987433 334444444444433333 3445566
Q ss_pred HHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc-ccchhHHHHHHHHhhHhh
Q 016055 295 VGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-STGTFFAFSAICSLTVLF 372 (396)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-~~~~~~~~~~~~~~~~~~ 372 (396)
....++.+...+.........+.|..+.++-..+.|+...+..++..++|++.|.+.| .+ +...+...+.+.++.+.+
T Consensus 392 ~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 392 IVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVL 471 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHH
Confidence 6666666666666666666789999999999999999999999999999999999998 44 444555555555444433
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=6.1e-23 Score=188.03 Aligned_cols=361 Identities=12% Similarity=0.017 Sum_probs=212.1
Q ss_pred ccchhhhhhHHHHHhhhh-chhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc-
Q 016055 5 FHSDLLSNVCFFIFWLPC-ALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL- 82 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr-~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~- 82 (396)
+..+..++.+++|+++|| +|||+++..+.++.+++.++.+++++++.+.+.|++.|++.|...+...++++|++|+++
T Consensus 57 ~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~ 136 (475)
T TIGR00924 57 YSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM 136 (475)
T ss_pred HHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc
Confidence 445666777789999999 899999999999999999999999999999999999999999999999999999998764
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccC----CChhHHhhcCChHHHHHHHH
Q 016055 83 --RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIP----ESPRWLAKTGKGIESEAALQ 152 (396)
Q Consensus 83 --r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~----e~p~~l~~~~~~~~~~~~~~ 152 (396)
|+++.++...+.++|..+||.+++++ +||+.|.+.++..++..+.....+ +.|+. .++.+.++.+....
T Consensus 137 ~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 215 (475)
T TIGR00924 137 PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSV-PDPLSGQGKTYGKL 215 (475)
T ss_pred ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCC-CCCcchhhhhhHHH
Confidence 88899999999999999999999887 899999987765555444333322 22210 00000111000000
Q ss_pred ---------------HHhCCCcchHHHHHHHH---HH--HHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhh
Q 016055 153 ---------------RLRGADADISEEAAEIR---EY--TETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNG 212 (396)
Q Consensus 153 ---------------~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (396)
....++.. .+...... .. ......+++.+..+..|......+.....+.+.. +..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~----~~Q 290 (475)
T TIGR00924 216 LLALLAALALVFFCAWLMHHVVI-ANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVL----YAQ 290 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHH----HHH
Confidence 00000000 00000000 00 0000000000000101111111122222222222 222
Q ss_pred hHHhHHHHHHH-cCC-------CchhHHHHHHHHHHHHhhHHHHHHhhcCC-----ccee--eecchHHHHHHHHHHHHH
Q 016055 213 IAFYASSIFIS-AGF-------SGSIGMIAMVVIQIPMTLLGVLLMDKSGR-----RPLL--LVSAAGTCLGCLLAALSF 277 (396)
Q Consensus 213 ~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-----~~~~--~~~~~~~~~~~~~~~~~~ 277 (396)
.....+.+.++ .+. .+.....+..+..++..++..++-.|.+| +... .++.++.+++...+.+..
T Consensus 291 ~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~ 370 (475)
T TIGR00924 291 MPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASI 370 (475)
T ss_pred hhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222211 111 23355555566666665554443333333 2222 456666666666655431
Q ss_pred HHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-ccc
Q 016055 278 LFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SST 356 (396)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~ 356 (396)
...+. ....+.+.++...++.+.......|...++..+..|++.||+.+|+......+|..+++.+.....+. +..
T Consensus 371 ~~~~~---~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~ 447 (475)
T TIGR00924 371 WFADA---GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVT 447 (475)
T ss_pred hhcCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 11110 01234555566666677778888899999999999999999999999999999999999888877663 333
Q ss_pred chhHHHHHHHHhhHhhee
Q 016055 357 GTFFAFSAICSLTVLFVA 374 (396)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~ 374 (396)
..+...+....+.+++..
T Consensus 448 ~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 448 GVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.5e-22 Score=169.71 Aligned_cols=298 Identities=17% Similarity=0.123 Sum_probs=221.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHH---hhchhhHHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIV---FSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
+|++|....+.+.|++.+|+|+|+.+++|+.++++++.+.. -..+|..++++-++.|.|.+...+.++.++....++
T Consensus 56 aff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~ 135 (422)
T COG0738 56 AFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKP 135 (422)
T ss_pred HHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc
Confidence 56788888888899999999999999999999999999984 567899999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh-----------------------hHHHHHHHhhHHHHHHHHHHhc--cCCCh
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL-----------------------NWRILALIGTIPCLVQLIGLCF--IPESP 135 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----------------------~wr~~f~~~~~~~~~~~~~~~~--~~e~p 135 (396)
++..+.+++.+..+++|.+++|++++.+ .||++|...+...++..+.... .||.+
T Consensus 136 ~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~ 215 (422)
T COG0738 136 ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQ 215 (422)
T ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCC
Confidence 8899999999999999999999998765 3777887766665555444333 34432
Q ss_pred hHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHH
Q 016055 136 RWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAF 215 (396)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
.- ..+..+.++....+++++++.+...+..+++...+ .....
T Consensus 216 ~~----------------------------------~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~E----va~gs 257 (422)
T COG0738 216 VA----------------------------------APSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAE----VAIGS 257 (422)
T ss_pred cc----------------------------------cccccccccchHHHHHhChHHHHHHHHHHHHHhHH----HHHHH
Confidence 10 00001111115677888888877777766666654 44555
Q ss_pred hHHHHHHH-cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 216 YASSIFIS-AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 216 ~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
+.+.+..+ .|.+.. ...+....+.++|++++.++.+|+...|.+.+..+...+.++...+. +..
T Consensus 258 fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~------------~g~ 325 (422)
T COG0738 258 FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI------------GGV 325 (422)
T ss_pred HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh------------cCh
Confidence 56655555 555544 55666678899999999999999999888877666655555555542 223
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS 354 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~ 354 (396)
.. +......+.+.....|..++...+..|.+ ....|..-...-+|+++.|++.|++.|..
T Consensus 326 v~-~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 326 VA-LYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred HH-HHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecchHHHHHHHHHHHhh
Confidence 33 33344556677788899999999999933 34444455566789999999999999943
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.89 E-value=2.3e-21 Score=176.45 Aligned_cols=332 Identities=15% Similarity=0.095 Sum_probs=201.7
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.+..++.++.|+++|.||||.+++.+.++..+|+++++.++|...++++..+.|+|.|.... ....++|..|.|+|...
T Consensus 89 l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~ 167 (599)
T PF06609_consen 89 LASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLG 167 (599)
T ss_pred HHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhH
Confidence 45667778999999999999999999999999999999999999999999999999877664 45568999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHh-------
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLR------- 155 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~------- 155 (396)
.++...........++.++..+ +|||.|++..+...+.++..+++-.+|++...++++...++.++++.
T Consensus 168 ~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~ 247 (599)
T PF06609_consen 168 LAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLF 247 (599)
T ss_pred hHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHH
Confidence 8777766655555677777655 89999999888766654433222222333222222211222222220
Q ss_pred --------------C---CCcchHHHHHHHH-------HHHHHH---hhccchhHHHhhhhhhhhHHHHHHHHHHHHHhc
Q 016055 156 --------------G---ADADISEEAAEIR-------EYTETL---ERLSEGGILELFQRKYAHSLIVGVGLMVLQQFG 208 (396)
Q Consensus 156 --------------~---~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
. .+.+......... ...-.+ ..+++.-..+++|+++ .+...+...+.....
T Consensus 248 ~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r--~~~~~lvi~fi~G~~ 325 (599)
T PF06609_consen 248 IAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRR--GFAALLVISFISGMN 325 (599)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccch--HHHHHHHHHHHHHHH
Confidence 1 1111111111100 000111 1112223345666532 122222222222222
Q ss_pred chhhhHHhHHHHHHHcCCCc------hhHHHHHHHHHHHHhhHHHHHHhhcCCcc-eeeecchHHHHHHHHHHHHHHHHh
Q 016055 209 GVNGIAFYASSIFISAGFSG------SIGMIAMVVIQIPMTLLGVLLMDKSGRRP-LLLVSAAGTCLGCLLAALSFLFQD 281 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 281 (396)
.+....+|.+......+.++ .......+++...|..+.+.+..|++|-| .++++..++.+++.++... .
T Consensus 326 ~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~---~- 401 (599)
T PF06609_consen 326 FFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV---R- 401 (599)
T ss_pred HHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc---c-
Confidence 23333455544444333332 25566777888888899999999888744 4445555554444443322 1
Q ss_pred hhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 282 LQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
..+....+...++.+.+.+.........++-..|+++-+++.|+..+++.+|+.++..+...+.
T Consensus 402 ------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 402 ------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred ------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1111122233334444444444445566777789999999999999999999999999886654
No 93
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=4.6e-22 Score=174.00 Aligned_cols=329 Identities=11% Similarity=0.148 Sum_probs=201.8
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.|.-+.++..++.|+++||+|.|+++..+.+.+++.+++.++++++..+.+.|++.|+++|... ....++..|+|+++|
T Consensus 70 ~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER 148 (511)
T TIGR00806 70 VLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRY 148 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHH
Confidence 3556677778889999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHh---hHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIG---TIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGA 157 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~---~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~ 157 (396)
+++.++..++..+|.+++++++..+ |||+.+.+. .....++++..+++|..++.+..+++.+.......+....
T Consensus 149 ~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~ 228 (511)
T TIGR00806 149 QRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQM 228 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccC
Confidence 9999999999999999999999877 888766553 3344455667788887666554433221110000000000
Q ss_pred CcchHHHHHH-HHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCC-ch---hHH
Q 016055 158 DADISEEAAE-IREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFS-GS---IGM 232 (396)
Q Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~ 232 (396)
.++...+..+ .+......-..-...+++..+++. ++...+.+....++++.+..|.+.+.++..-+ +. ..-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~----vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~ve 304 (511)
T TIGR00806 229 VPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQ----LLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVD 304 (511)
T ss_pred CCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcc----hhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHH
Confidence 0000000000 000000000011122333333432 23333444445556777778888777665332 21 344
Q ss_pred HHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchh
Q 016055 233 IAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIP 312 (396)
Q Consensus 233 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (396)
.+..+.+.+..+..|++-.++.+-.-+.++.....-+.+++... . ..+.+.......++...+.. ..++.
T Consensus 305 A~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~----~-----t~~Iw~~Y~~yvlf~~~y~f-litia 374 (511)
T TIGR00806 305 AASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMS----Q-----SHDIWVLYVTYVLFRGIYQF-LVPIA 374 (511)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhh----c-----ccchHHHHHHHHHHHHHHHH-HHHHH
Confidence 44455666777788887555533212222221111111111111 0 13445555555555555543 33444
Q ss_pred hhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh
Q 016055 313 WVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF 347 (396)
Q Consensus 313 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 347 (396)
..-+++....+..|..+|+.+...-+-..+-..+.
T Consensus 375 ~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 375 TFQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred HHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 45566666777779999998888777666665554
No 94
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.89 E-value=3.4e-22 Score=188.06 Aligned_cols=256 Identities=17% Similarity=0.179 Sum_probs=168.3
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc------------------------------------
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK------------------------------------ 47 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~------------------------------------ 47 (396)
.|..+.++..++.|+++||+|||+++.+++++++++++++++.+
T Consensus 76 ~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 155 (633)
T TIGR00805 76 SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRP 155 (633)
T ss_pred hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccc
Confidence 45567777888899999999999999999999999999988752
Q ss_pred ---------------hhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh----
Q 016055 48 ---------------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL---- 108 (396)
Q Consensus 48 ---------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l---- 108 (396)
.+..++++|+++|+|.+...+...+++.|++|+++|+++.++...+..+|..+|+++++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 156 TQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred cccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 2456789999999999999999999999999999999999999999999999999988764
Q ss_pred -h---------------------HHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHH
Q 016055 109 -N---------------------WRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAA 166 (396)
Q Consensus 109 -~---------------------wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (396)
+ ||..|++.+++.++..+.++++|++.+....+.+.++.++. ...+.+ +. ...
T Consensus 236 ~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~~~-~~--~~~ 310 (633)
T TIGR00805 236 VDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETE--KLEKSE-DK--SRK 310 (633)
T ss_pred cccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhh--cccccc-cc--cch
Confidence 1 77778888877777655556666543110000000000000 000000 00 000
Q ss_pred HHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCchhHHHHH---HH-HHHH
Q 016055 167 EIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGSIGMIAM---VV-IQIP 241 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~-~~~~ 241 (396)
+ .....++.....+++++++.++...+...+... .......+.|.+++ ..+.++....... .+ +.++
T Consensus 311 ~----~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~----~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~v 382 (633)
T TIGR00805 311 K----NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSL----AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGL 382 (633)
T ss_pred h----hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHH
Confidence 0 000001112345667777766555444444333 34455566666665 4677776433333 33 4578
Q ss_pred HhhHHHHHHhhcCC--cceeeecchHHHHHHHH
Q 016055 242 MTLLGVLLMDKSGR--RPLLLVSAAGTCLGCLL 272 (396)
Q Consensus 242 ~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~ 272 (396)
+.+++|+++||+++ |+.+..+.+...++.+.
T Consensus 383 G~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 383 GYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 89999999999984 45555555555554433
No 95
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.88 E-value=9.3e-21 Score=170.25 Aligned_cols=347 Identities=14% Similarity=0.054 Sum_probs=207.8
Q ss_pred hhhhhhHHHHHhhh----hchhhhHHhhH-HHHHHHHHHHHHhhchhh-----------------HHHHHHHHHHhhhhh
Q 016055 8 DLLSNVCFFIFWLP----CALWKQTMGFS-DIVCIIGWVIIVFSKAAW-----------------WLDLGRLLVGYGMGL 65 (396)
Q Consensus 8 ~~~~~~~~~G~l~d----r~Grk~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~ 65 (396)
..++..|+.|+++| |+||||.++.+ .+...++.++.+++++.. .++++-.+..++...
T Consensus 51 ~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~ 130 (477)
T TIGR01301 51 SGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM 130 (477)
T ss_pred HHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999 59999998874 666666667777776643 223333344457777
Q ss_pred cccccceeeecccCCCcc--hhHHHHHHHHHHHHHHHHHHHhhhh-------------------hHHHHHHHhhHHHHHH
Q 016055 66 LSYVVPVYIAEITPKNLR--GGFTTVHQLMICIGVSMTYLIGAFL-------------------NWRILALIGTIPCLVQ 124 (396)
Q Consensus 66 ~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lG~~~~~~l~~~l-------------------~wr~~f~~~~~~~~~~ 124 (396)
..+...+++.|.+|+++| +.+.++.+...++|.++|+.+++.. +.|..|++.++..++.
T Consensus 131 ~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~ 210 (477)
T TIGR01301 131 LQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAIL 210 (477)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHH
Confidence 888889999999998865 5799999999999999999988753 3577888877776666
Q ss_pred HH-HHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhh-----hhhhHHHHH
Q 016055 125 LI-GLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQR-----KYAHSLIVG 198 (396)
Q Consensus 125 ~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 198 (396)
.. ..+..+|.|... .++.+++ +.++.+ +...+..++++++. +..++..+.
T Consensus 211 ~l~t~~~v~E~~~~~-~~~~~~~------~~~~~~-----------------~~~~~~~~~~i~~~~~~mP~~m~~l~~v 266 (477)
T TIGR01301 211 TYIALSAVKENPLIG-SDDFINS------EAAPPS-----------------KHGEEAFFGELFGAFKYLPRPVWILLLV 266 (477)
T ss_pred HHHHeeeeeccCCCc-cccchhh------hccccc-----------------ccchhhhHHHHHHHHHHCCHHHHHHHHH
Confidence 54 455678876211 0000000 000000 00001122333322 233444444
Q ss_pred HHHHHHHHhcchhhhHHhHHHHHHH--cCCCc--------h-----hHHHHHHHHHHHHhhHHHHHHhhcCC-cceeeec
Q 016055 199 VGLMVLQQFGGVNGIAFYASSIFIS--AGFSG--------S-----IGMIAMVVIQIPMTLLGVLLMDKSGR-RPLLLVS 262 (396)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~-----~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~ 262 (396)
.++.++.. .....|.+.+..+ .+.++ . +.....++...+.+++..++.+|+|+ |+....+
T Consensus 267 qffsW~a~----f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s 342 (477)
T TIGR01301 267 TCLNWIAW----FPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIV 342 (477)
T ss_pred HHHHHHHH----HHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 44444433 3333333333322 11111 0 33344455556677788889999985 5666777
Q ss_pred chHHHHHHHHHHHHHHHHhhh-h-------cccchh-hHHHHHHHHHHHHhhccccchhhhhhcccCCc--CcchhhhHH
Q 016055 263 AAGTCLGCLLAALSFLFQDLQ-Q-------WIKATP-FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPI--NMKGSAGSL 331 (396)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~ 331 (396)
.++.++++....+.....++. . ..+... ....+..+...|........+.++++++..|+ +..|..+|+
T Consensus 343 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgi 422 (477)
T TIGR01301 343 NIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGV 422 (477)
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhH
Confidence 777777776666543211100 0 000000 23344444455555566677888999999995 456999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHH-hc--ccchhHHHHHHHHhhHhheeeecCCCCC
Q 016055 332 VTLVSWLGSWIISFTFNFLMK-WS--STGTFFAFSAICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 332 ~~~~~~~g~~~~~~~~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (396)
.|.+..+.+.+.....|.+.+ .+ ....+.+.++..+++++...+.+|+++.
T Consensus 423 lN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 423 LNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999998888666 22 2333444455555566666667776553
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=1.7e-20 Score=168.93 Aligned_cols=314 Identities=13% Similarity=0.004 Sum_probs=185.8
Q ss_pred hhhHHH-HHhhhhchhhhHHhhHHHHH-HHHHHHHH-h--hch-hhHHHHHHHHHHhhhhhcccccceeeecccCCCcch
Q 016055 11 SNVCFF-IFWLPCALWKQTMGFSDIVC-IIGWVIIV-F--SKA-AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRG 84 (396)
Q Consensus 11 ~~~~~~-G~l~dr~Grk~~~~~~~~~~-~~~~~~~~-~--~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 84 (396)
+..|++ ++..||+||||.+++.+.+. .......+ + ..+ ..+++..-++.++..+...+...++..|..++++++
T Consensus 53 l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~ 132 (390)
T TIGR02718 53 LWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLA 132 (390)
T ss_pred HHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhh
Confidence 445556 44678899999876655332 21222222 1 222 334455556666777788888888888988888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
...+....+..+|.++++...+++ +||.+|++.++..++..+..++++|+++. ++++
T Consensus 133 ~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~-----~~~~-------------- 193 (390)
T TIGR02718 133 KGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA-----SPEA-------------- 193 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC-----cccc--------------
Confidence 888888888899999998766554 99999999888777665554555443210 0000
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHHH----
Q 016055 161 ISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMV---- 236 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 236 (396)
++++..+.++.+|++..+......++..... .....+.+.+.++.|.+++.......
T Consensus 194 ---------------~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~ 254 (390)
T TIGR02718 194 ---------------PLARRASLFRFFRRPLAWSLLALALLSAMTA----VSGFGLSKLYLVDAGWPLEWIGRLGMAGGA 254 (390)
T ss_pred ---------------chhhHHHHHHHHcCcCHHHHHHHHHHHHHHH----HHHHHHhhHHHHhcCCCHHHHHHHHhHHHH
Confidence 0001123456666666555444443333322 22233445555667888774443332
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
...+++.++.|++.||+|+|+.+..+....++........ . .. +. ............+.+.......+...+..
T Consensus 255 ~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-~-~~---~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 328 (390)
T TIGR02718 255 VTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQ-A-AF---WL-APGIAVAWSCSAFGSLITGITSVAIYTAF 328 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H-Hc---cc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556678899999999999988776655443322222111 0 00 00 11111222222222222222234444565
Q ss_pred cccCCc-CcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccchhHHHHHHHHh
Q 016055 317 SEVFPI-NMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGTFFAFSAICSL 368 (396)
Q Consensus 317 ~~~~p~-~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 368 (396)
.+..++ +.+++.+++.+...++|..++|.+.|.+.|. ++...+...+.+.++
T Consensus 329 ~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 329 MRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 566665 8899999999999999999999999999994 443444444443333
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=6.3e-21 Score=175.79 Aligned_cols=332 Identities=13% Similarity=0.060 Sum_probs=186.5
Q ss_pred hhhHHHHHhhhh-chhhhHHhhHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHhhhhhcccccceeeecccCCCc--chhH
Q 016055 11 SNVCFFIFWLPC-ALWKQTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL--RGGF 86 (396)
Q Consensus 11 ~~~~~~G~l~dr-~Grk~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~ 86 (396)
...+++|+++|| +|||+++..+.++.+++..++++++ +.+.+.+.|+++|++.|...+...+++.|++|+++ |..+
T Consensus 72 ~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~ 151 (500)
T PRK09584 72 GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGA 151 (500)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhc
Confidence 334579999999 5999999999999999999998874 56677788999999999999999999999998654 4567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH----HhccCCChhHHhhcCChHHHHHHH-------
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG----LCFIPESPRWLAKTGKGIESEAAL------- 151 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~----~~~~~e~p~~l~~~~~~~~~~~~~------- 151 (396)
.++++.+.++|..++|.+++++ |||+.|.+.++..++..+. ...++|.++. ..+++.+......
T Consensus 152 ~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 152 FTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSK-PDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCC-CCccccchhhHHHHHHHHHH
Confidence 8888999999999999999887 8999999977644443322 2223332110 0000111111000
Q ss_pred ----HHHhCCCcchHHHHHHHHHHH-HHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-c-
Q 016055 152 ----QRLRGADADISEEAAEIREYT-ETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-A- 224 (396)
Q Consensus 152 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 224 (396)
......+.+..+......... ............+.-+++.. .....++....++..+.....+......+ .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~ 308 (500)
T PRK09584 231 LIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKMI--VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVE 308 (500)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHhcc
Confidence 000000000000000000000 00000000000001111111 11111122222222222222222221111 1
Q ss_pred ----CC--CchhHHHHHHHHHHHHhhHHHHHHhh----cCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHH
Q 016055 225 ----GF--SGSIGMIAMVVIQIPMTLLGVLLMDK----SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLAL 294 (396)
Q Consensus 225 ----~~--~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
|. .+.....+..+..++..++..++-+| .+..+.+.++.++.+++...+.......+.+ ...+....
T Consensus 309 ~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~---~~vs~~~~ 385 (500)
T PRK09584 309 HSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDA---GIVSVNWL 385 (500)
T ss_pred ccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CccCHHHH
Confidence 21 23355555565555665555444444 4444556677777777777665532211100 11223355
Q ss_pred HHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhH
Q 016055 295 VGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFN 348 (396)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 348 (396)
+...++.+.......|....++.+..|++.||+.+|+......+|..++..+.+
T Consensus 386 ~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 386 IASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666677777888898999999999999999999877666666666666554
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.87 E-value=5.7e-20 Score=168.54 Aligned_cols=347 Identities=15% Similarity=0.066 Sum_probs=212.8
Q ss_pred hhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh------chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 12 NVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS------KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 12 ~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
..++.|+++||+|||+++.++.+++.+++++++++ ++++.+.+.|++.|+|.+...+.+...+.+|+| ++||+
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 34468999999999999999999999999999997 689999999999999999999988999999997 67999
Q ss_pred HHHHHHHHHHHHHHH-HHHHhhhh--hHHHHHHHhhHHHHHHHH-HHhc--cCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 86 FTTVHQLMICIGVSM-TYLIGAFL--NWRILALIGTIPCLVQLI-GLCF--IPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~-~~~l~~~l--~wr~~f~~~~~~~~~~~~-~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
+.++...+.++|.++ +++...++ +|+..|++.+++.++..+ ...+ .|++|++..++++.+++++..++.++...
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y 235 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVY 235 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhh
Confidence 999999999999975 55555555 899888887776665543 3333 35555554344333333333222111000
Q ss_pred ------------------------------------------------------------------------chHHHHHH
Q 016055 160 ------------------------------------------------------------------------DISEEAAE 167 (396)
Q Consensus 160 ------------------------------------------------------------------------~~~~~~~~ 167 (396)
+.+.+..+
T Consensus 236 ~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~ 315 (591)
T PTZ00207 236 LKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKE 315 (591)
T ss_pred hhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccc
Confidence 00000000
Q ss_pred H-H---HHHHHH--------h---hccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHc-CC--Cc-
Q 016055 168 I-R---EYTETL--------E---RLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GF--SG- 228 (396)
Q Consensus 168 ~-~---~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~- 228 (396)
. + +..+.+ + ++...++++.+++..+|.+++.+++... .......-+.++.+.. |. +.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g----~gl~~~~N~~qI~~sl~g~~~~~~ 391 (591)
T PTZ00207 316 HVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVG----AHFVIIFNARFIYTALAGEAPDDA 391 (591)
T ss_pred cccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhC----chheeeecHHHHHHHhcCCCCCcc
Confidence 0 0 000000 0 0111245555555555555444444333 3333444445566665 54 22
Q ss_pred -hh-HHHHHHHHHHHHhhHHHHHHhhcCCcc----e-----eeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHH
Q 016055 229 -SI-GMIAMVVIQIPMTLLGVLLMDKSGRRP----L-----LLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGV 297 (396)
Q Consensus 229 -~~-~~~~~~~~~~~~~~~~g~l~d~~g~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (396)
+. ...+.++++.+|++..|.+.....+|+ . +.+..+ +.++.+++.+. .+...+...
T Consensus 392 ~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~------------~p~~~L~~~ 458 (591)
T PTZ00207 392 LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLT------------LPKAALPLP 458 (591)
T ss_pred ceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHH------------CCccHhHHH
Confidence 22 567888999999999998873222221 1 111222 33333333331 111344444
Q ss_pred HHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHH-HHHhHHHHHhc--------------ccchhHHH
Q 016055 298 LVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWII-SFTFNFLMKWS--------------STGTFFAF 362 (396)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~-~~~~g~~~~~~--------------~~~~~~~~ 362 (396)
.++.+...+...++....++|+|. ++-|+-+-+.....-+|..+- -.+.|.+.|.. ...++.+.
T Consensus 459 ~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~ 537 (591)
T PTZ00207 459 YFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFL 537 (591)
T ss_pred HHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHH
Confidence 555555566667777899999999 788888887777777777765 56778887711 12346666
Q ss_pred HHHHHhhHhheeeec
Q 016055 363 SAICSLTVLFVAKLV 377 (396)
Q Consensus 363 ~~~~~~~~~~~~~~~ 377 (396)
++++.+..+....+.
T Consensus 538 ~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 538 LGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHhhee
Confidence 666666555544433
No 99
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.86 E-value=2.2e-19 Score=162.45 Aligned_cols=341 Identities=17% Similarity=0.150 Sum_probs=211.6
Q ss_pred hhhhHHHHHhhhhchhhhHH-hhHHHHHHHHHHHHHhh-c-hhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc---
Q 016055 10 LSNVCFFIFWLPCALWKQTM-GFSDIVCIIGWVIIVFS-K-AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR--- 83 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--- 83 (396)
.+..|+.|.++|+-|+||.+ .....+..+++....+. + +++...+.-++.-++.+.......+++.|..+++++
T Consensus 84 all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~ 163 (477)
T PF11700_consen 84 ALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRA 163 (477)
T ss_pred HHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhh
Confidence 34557889999999855554 55556666667666663 3 444455556666678888888899999999999888
Q ss_pred -----------------------hhHHHHHHHHHHHHHHHHHHHhhhh------------hHHHHHHHhhHHHH-HHHHH
Q 016055 84 -----------------------GGFTTVHQLMICIGVSMTYLIGAFL------------NWRILALIGTIPCL-VQLIG 127 (396)
Q Consensus 84 -----------------------~~~~~~~~~~~~lG~~~~~~l~~~l------------~wr~~f~~~~~~~~-~~~~~ 127 (396)
++..+.-....++|.++.-.+...+ +-|..+.+.++.-+ ..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~ 243 (477)
T PF11700_consen 164 AREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPL 243 (477)
T ss_pred hhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 8999998888888888877766554 24777777666543 44566
Q ss_pred HhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHh
Q 016055 128 LCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQF 207 (396)
Q Consensus 128 ~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (396)
.+++||.|+....++......... ++-...+++..|.+...++++..++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~g~-------------------------~~l~~t~k~~~~~~~~~~fLia~~l~~---- 294 (477)
T PF11700_consen 244 FLWLPDRPGPRPLPSGSSYLRFGF-------------------------KRLWRTFKEIRKLRQLFLFLIAYFLYS---- 294 (477)
T ss_pred HHhCCCCCCCCCCCcchhHHHHHH-------------------------HHHHHHHHHHHhChHHHHHHHHHHHHH----
Confidence 777888764200000000000000 001122333333333333333322222
Q ss_pred cchhhhHHhHH-HHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCc--ceeeecchHHHHHHHHHHHHHHHHh
Q 016055 208 GGVNGIAFYAS-SIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRR--PLLLVSAAGTCLGCLLAALSFLFQD 281 (396)
Q Consensus 208 ~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (396)
-+.+.+..... +..++.+++.. .......+.+++|+++.+++.||+|.| +++........+..+...+......
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 23333333333 34446788776 556666789999999999999999988 6665555444332222222111110
Q ss_pred hhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhH
Q 016055 282 LQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFF 360 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~ 360 (396)
. ...+...+....++.+.+.++..+...++.+|+.|+++.+..+|++...+...+.+||.+.|.+.+ .+.....+
T Consensus 375 ~----g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~ 450 (477)
T PF11700_consen 375 F----GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGF 450 (477)
T ss_pred c----CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 0 012223344455566777778888899999999999999999999999999999999999999999 33333333
Q ss_pred HHHHHHHhhHhheeeecCCCCCC
Q 016055 361 AFSAICSLTVLFVAKLVPETKGR 383 (396)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~ 383 (396)
....+.++.+++....++.+|++
T Consensus 451 ~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 451 LFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHHHhhccchhhh
Confidence 33444444444444555544433
No 100
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=1.3e-19 Score=150.97 Aligned_cols=296 Identities=17% Similarity=0.125 Sum_probs=217.6
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
++-+.+|+..+++.|+|.++.+..++++..++.++-... +.+.++.+-.+.|.|.+......++.+.+.+|+ +-+..+
T Consensus 59 ~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mt 136 (395)
T COG2807 59 AFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMT 136 (395)
T ss_pred HHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHH
Confidence 344556788999999999999999999999999998876 788899999999999999999999999999985 579999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchH
Q 016055 88 TVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADIS 162 (396)
Q Consensus 88 ~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (396)
+++....++|..+++.+.-.+ +||....+-+.+++++++.++.-. .|. +
T Consensus 137 glYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~-----~------------------- 190 (395)
T COG2807 137 GLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA--LRE-----Q------------------- 190 (395)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--ccc-----c-------------------
Confidence 999999888887777666554 799999999999988888776432 110 0
Q ss_pred HHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHH
Q 016055 163 EEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQ 239 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 239 (396)
....+.+..+-.+++|++.-|...+.+.++.. .++....|+|.++.+.|++.. .......+..
T Consensus 191 ----------~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~----~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~ 256 (395)
T COG2807 191 ----------AASIATKLVSVRKVWRSPLAWQVTLFMGLQSL----LYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQ 256 (395)
T ss_pred ----------ccccccccccccccccCchhHHHHHHHHhhHH----HHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHH
Confidence 00011222233456777766666555555444 467788899999999999887 5556667788
Q ss_pred HHHhhHHHHHHhhcC-CcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcc
Q 016055 240 IPMTLLGVLLMDKSG-RRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSE 318 (396)
Q Consensus 240 ~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (396)
++.++....+.+|.. +|+........+.++...+.+.. .+.+.. . .++.+...++.+|...+.+.+
T Consensus 257 ~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P----------~~~~~l-w--~~llG~G~G~~F~laL~li~~ 323 (395)
T COG2807 257 LPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP----------GQLPIL-W--ALLLGLGQGGAFPLALTLILL 323 (395)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh----------hhHHHH-H--HHHHhCccchHHHHHHHHHHh
Confidence 888999999999754 55555555566666666555421 112222 2 244555556667776666666
Q ss_pred cCC-cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccch
Q 016055 319 VFP-INMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGT 358 (396)
Q Consensus 319 ~~p-~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~ 358 (396)
..+ ++..+.-.|+.+..+++-+..||.+.|++.| .+++..
T Consensus 324 rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 324 RSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred hcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 554 4566778899999999999999999999999 444333
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.85 E-value=3.8e-20 Score=169.33 Aligned_cols=295 Identities=9% Similarity=0.032 Sum_probs=179.6
Q ss_pred hhhhHHHHHhhhh----chh-hhHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 10 LSNVCFFIFWLPC----ALW-KQTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 10 ~~~~~~~G~l~dr----~Gr-k~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
.+..|+.|.++|| +|| |+.++.+.+..+++..+....++ ...+++..++.+.+.........++..|+.
T Consensus 59 ai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t 138 (444)
T PRK09669 59 AVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAIT 138 (444)
T ss_pred HcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhc
Confidence 3455678999998 786 55566787888777766555543 345666666777777777777788999988
Q ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHHhh----hh-------hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChH
Q 016055 79 -PKNLRGGFTTVHQLMICIGVSMTYLIGA----FL-------NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGI 145 (396)
Q Consensus 79 -~~~~r~~~~~~~~~~~~lG~~~~~~l~~----~l-------~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~ 145 (396)
++++|++..++...+..+|..+++.+.. .+ +|+..+.+.++++++..+. .+..+|.++. + +
T Consensus 139 ~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~-----~-~ 212 (444)
T PRK09669 139 NDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP-----E-V 212 (444)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC-----C-C
Confidence 4577998888888777777776654332 22 6888887777766655443 3334443210 0 0
Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcC
Q 016055 146 ESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAG 225 (396)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (396)
+ ++....++.++.+|++.++......++.............+|..+.. +
T Consensus 213 ~----------------------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~---~ 261 (444)
T PRK09669 213 D----------------------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL---L 261 (444)
T ss_pred c----------------------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeec---C
Confidence 0 00111234566677777666555444333322211122222222221 1
Q ss_pred CCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHH
Q 016055 226 FSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTG 302 (396)
Q Consensus 226 ~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (396)
++. .......+..+++.++.+++.||+|+|+.+..+.....+....+... +.++........++.+
T Consensus 262 -~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~g 330 (444)
T PRK09669 262 -RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI----------PPSNVWLIFALNILFN 330 (444)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh----------CcchHHHHHHHHHHHH
Confidence 121 23333346677888899999999999998876665444333222221 0122233333334455
Q ss_pred HhhccccchhhhhhcccCC-------cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 303 SFSLGMGGIPWVIMSEVFP-------INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.......+..+++.+|..+ .+..|...|..+....+|..+++.+.|.+.+
T Consensus 331 ~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666777888888875 2345667888999999999999999999988
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.82 E-value=1.4e-18 Score=158.28 Aligned_cols=298 Identities=16% Similarity=0.186 Sum_probs=209.3
Q ss_pred hhHHHHHhhh----hchhhhHH-hhHHHHHHHHHHHHHhh-c-------hhhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 12 NVCFFIFWLP----CALWKQTM-GFSDIVCIIGWVIIVFS-K-------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 12 ~~~~~G~l~d----r~Grk~~~-~~~~~~~~~~~~~~~~~-~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
.-|+.|.++| |+||||.. +.|.++.+++..+.... + ....+.+.-++..++.........++..|..
T Consensus 53 ~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt 132 (428)
T PF13347_consen 53 TDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELT 132 (428)
T ss_pred cCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcccc
Confidence 3457899999 89965554 56888888887777655 4 2334577777789999999999999999999
Q ss_pred C-CCcchhHHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChH
Q 016055 79 P-KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----------NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGI 145 (396)
Q Consensus 79 ~-~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----------~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~ 145 (396)
+ +++|.+..+.-..+..+|.++...+...+ +|++...+.+++.++..+. .+..+|.++ +.+
T Consensus 133 ~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~ 206 (428)
T PF13347_consen 133 PDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV------EVT 206 (428)
T ss_pred ccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc
Confidence 8 56899999999888888886555544433 4888888887777766544 445666210 000
Q ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcC
Q 016055 146 ESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAG 225 (396)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (396)
+ ++++..-++.+++.++++.++.......+.............+|..+..++.+
T Consensus 207 ~--------------------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~ 260 (428)
T PF13347_consen 207 E--------------------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEG 260 (428)
T ss_pred c--------------------------cccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCch
Confidence 0 01112223456777888877777776666655554444444444444443332
Q ss_pred CCchhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhh
Q 016055 226 FSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFS 305 (396)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (396)
. .+.......+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+.. ..+.........+.+...
T Consensus 261 ~-~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~l~gi~~ 329 (428)
T PF13347_consen 261 L-ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG----------PGSPWLVLILFILAGIGY 329 (428)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHhHhhh
Confidence 1 22445566788889999999999999999999999998888887776641 134455555556666666
Q ss_pred ccccchhhhhhcccCCc-------CcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 306 LGMGGIPWVIMSEVFPI-------NMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 306 ~~~~~~~~~~~~~~~p~-------~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.......+++.+|..+. +..|...|+.+....++..+++.+.+.+.+
T Consensus 330 ~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 330 GAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 67777788889988763 446888999999999999999999998877
No 103
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.82 E-value=4.5e-18 Score=153.67 Aligned_cols=338 Identities=12% Similarity=0.069 Sum_probs=186.9
Q ss_pred ccchhhhhhHHHHHhhhhc-hhhhHHhhHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHhhhhhcccccceeeecccCCC-
Q 016055 5 FHSDLLSNVCFFIFWLPCA-LWKQTMGFSDIVCIIGWVIIVFSK-AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN- 81 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~-Grk~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~- 81 (396)
+......+.+++|+++||+ ||||++..+.++.+++.++.+..+ +...+.+...+.++|.|...+...++++|.+|++
T Consensus 54 ~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~ 133 (493)
T PRK15462 54 YCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD 133 (493)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC
Confidence 3344566777899999999 999999999999999988776543 2233444444555667777787788999999875
Q ss_pred -cchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHH-hhcCChHHHHHHHHHHh
Q 016055 82 -LRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWL-AKTGKGIESEAALQRLR 155 (396)
Q Consensus 82 -~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l-~~~~~~~~~~~~~~~~~ 155 (396)
+|..+.++...+.++|..++|.+.+++ |||+.|.+.++..++.++......+..... ..++++.+.++......
T Consensus 134 ~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 213 (493)
T PRK15462 134 PRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNW 213 (493)
T ss_pred ccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHH
Confidence 689999999999999999999999988 899999987665444443332211110000 00000000000000000
Q ss_pred ----C--------CCcchHHHH-HHHHHHH--H------HHhhccchhHHHhhhhhhhhHHHHHHHHH----HHHHhcch
Q 016055 156 ----G--------ADADISEEA-AEIREYT--E------TLERLSEGGILELFQRKYAHSLIVGVGLM----VLQQFGGV 210 (396)
Q Consensus 156 ----~--------~~~~~~~~~-~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 210 (396)
- ......++. ....... . .... ++.+-. .+++....+...+. +..+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----er~r~~~~~~l~~~~~~Fw~~~~Q~~ 288 (493)
T PRK15462 214 GWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYR-KAENQK----QRKELGLIVTLTFFSMLFWAFAQQGG 288 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHH----HHhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 000000000 0000000 0 0000 000000 01111111111222 22222222
Q ss_pred hhhHHhHHHHHHHc--C--CCchhHHHHHHHHHHHHhhHHHHHHhhcCC--cc-----eeeecchHHHHHHHHHHHHHHH
Q 016055 211 NGIAFYASSIFISA--G--FSGSIGMIAMVVIQIPMTLLGVLLMDKSGR--RP-----LLLVSAAGTCLGCLLAALSFLF 279 (396)
Q Consensus 211 ~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~--~~-----~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
+.++.|.....+.. | .++++...+..+..++.+++..++=.|..+ |. -+.++.++.+++.+.+.+....
T Consensus 289 ~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~ 368 (493)
T PRK15462 289 SSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARW 368 (493)
T ss_pred HHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 23333332222111 2 334466677777777777776666555532 21 1456777777777666654332
Q ss_pred HhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHH-HHHHHHHHHHhHHH
Q 016055 280 QDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVS-WLGSWIISFTFNFL 350 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~g~~ 350 (396)
.+.. . ..+...++...++.........|+..+.++++.|++.++..+|+..... .+|..++..+.+..
T Consensus 369 ~~~~--~-~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 369 SAMY--G-HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred cCCC--C-CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 0 1344445566666677788899999999999999999999999986533 46666665555544
No 104
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.82 E-value=1.8e-18 Score=149.51 Aligned_cols=265 Identities=14% Similarity=0.095 Sum_probs=174.9
Q ss_pred HhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh---------------
Q 016055 44 VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL--------------- 108 (396)
Q Consensus 44 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l--------------- 108 (396)
+..++|+.++++-++.|.|.+...+..+.++++..++|++.+.+++.+..+++|..++|.+++.+
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34678999999999999999999999999999999999999999999999999999999998743
Q ss_pred -----hHHHHHHHhhHHHHHHHHHHhc--cCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccch
Q 016055 109 -----NWRILALIGTIPCLVQLIGLCF--IPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEG 181 (396)
Q Consensus 109 -----~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (396)
+||++|++.+...++..+.+.+ +||.++ ++++ + . . ++ ++.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~--~--------------~---------~-~~-~~~ 131 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA--R--------------V---------S-SG-DTT 131 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc--c--------------c---------c-cc-ccc
Confidence 4889998665554444333333 454321 0000 0 0 0 00 000
Q ss_pred hHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH---cCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCC
Q 016055 182 GILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS---AGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGR 255 (396)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~ 255 (396)
..++.++++..+.. .+..+.+.+.......|.+.++.+ .+.++. ........+.++|+++.+++.||+++
T Consensus 132 ~~~~~~~~~~~~l~----~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~ 207 (310)
T TIGR01272 132 QKTSAFQFTHLVLG----ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQ 207 (310)
T ss_pred chhhHHhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 11123333333332 233333333455556666666654 356554 55666678899999999999999999
Q ss_pred cceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHH
Q 016055 256 RPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLV 335 (396)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 335 (396)
|+.+..+..+..++..+... .+...... .....+.+.....|...+...+..|++ .+++.++. ..
T Consensus 208 ~~~l~~~~~l~~~~~~l~~~------------~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~ 272 (310)
T TIGR01272 208 GRYLAFNAFLAVLLSIGAAL------------THGYVAMW-FVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CL 272 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHH------------cCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HH
Confidence 88877666655555433322 11112222 223445666677788778888887764 45666764 67
Q ss_pred HHHHHHHHHHHhHHHHH-hcccchhH
Q 016055 336 SWLGSWIISFTFNFLMK-WSSTGTFF 360 (396)
Q Consensus 336 ~~~g~~~~~~~~g~~~~-~~~~~~~~ 360 (396)
+.+|+++.|.+.|.+.| .+....++
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHH
Confidence 78999999999999999 45444444
No 105
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=5.9e-18 Score=144.42 Aligned_cols=328 Identities=15% Similarity=0.119 Sum_probs=213.5
Q ss_pred hhhHHHHHhhhhchh-hhHHhhHHHHHHHHHHHHHhhch--hh-HHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 11 SNVCFFIFWLPCALW-KQTMGFSDIVCIIGWVIIVFSKA--AW-WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 11 ~~~~~~G~l~dr~Gr-k~~~~~~~~~~~~~~~~~~~~~~--~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
+-+|+.|.++|+.|+ |+.+-....+..++.++..+.++ ++ ..++.-.+..++.......-.+++.+..++++-++.
T Consensus 73 ~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ri 152 (438)
T COG2270 73 LLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRI 152 (438)
T ss_pred HHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcc
Confidence 345688999999995 55555566666666666666654 44 445567788889889999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----------------------hHHHHHHHhhHHHHHH-HHHHhccCCChhHHhhcCC
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----------------------NWRILALIGTIPCLVQ-LIGLCFIPESPRWLAKTGK 143 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----------------------~wr~~f~~~~~~~~~~-~~~~~~~~e~p~~l~~~~~ 143 (396)
.+.-.....+|..+.-...... +=|..+.+.++-.++. +.+.+..+|.++- +.+
T Consensus 153 S~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~---~~~ 229 (438)
T COG2270 153 SGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKI---SSP 229 (438)
T ss_pred cccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccc---ccc
Confidence 8877766667766554443111 3566676666644433 4455666665420 000
Q ss_pred hHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-
Q 016055 144 GIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI- 222 (396)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 222 (396)
+ .+.. ...-++-..++++..+++....+++..++. .-+.+.+......+-.
T Consensus 230 ~--------------------~~~l----~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~----~DGv~til~~~~~fg~~ 281 (438)
T COG2270 230 P--------------------PTAL----RNGFKELKSTFKEIRGRKNLVLFLIARFFY----IDGVNTILAMGGVFGAA 281 (438)
T ss_pred c--------------------hHHH----HHHHHHHHHHHHHHhcccchHHHHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 0 0000 000111223455555555444444433322 2234444444444433
Q ss_pred HcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHH
Q 016055 223 SAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLV 299 (396)
Q Consensus 223 ~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (396)
+.|++.. .......+..++|+++.|++.||+|.|+++..+.++..+.++...+. ..........+
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~------------~~~~~f~i~gl 349 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL------------EGELDFWILGL 349 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc------------cccHHHHHHHH
Confidence 6677765 55566678999999999999999999999988887777666655542 22333444445
Q ss_pred HHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecC
Q 016055 300 YTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
+.+.+.++..+..-++..+.+|+++.++.+|+++..++..+..+|.+.+.+.+ .+....-....++.+..+++.....|
T Consensus 350 l~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 350 LVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeec
Confidence 55666777788888999999999999999999999999999999999999999 34334444444444455555555666
Q ss_pred CCC
Q 016055 379 ETK 381 (396)
Q Consensus 379 ~~~ 381 (396)
+.+
T Consensus 430 ~~~ 432 (438)
T COG2270 430 VPG 432 (438)
T ss_pred CCC
Confidence 543
No 106
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=9.3e-19 Score=161.18 Aligned_cols=302 Identities=13% Similarity=0.020 Sum_probs=176.7
Q ss_pred hhhHHHHHhhh----hchh-hhHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeeccc-
Q 016055 11 SNVCFFIFWLP----CALW-KQTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEIT- 78 (396)
Q Consensus 11 ~~~~~~G~l~d----r~Gr-k~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~- 78 (396)
+..|+.|.++| |+|| |+.++.+.+..+++..+....++ +..+.+.-++.+++.....+...++..|..
T Consensus 57 i~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~ 136 (473)
T PRK10429 57 INDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTL 136 (473)
T ss_pred HhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCC
Confidence 34567899999 6698 66777788888887666544332 334556667778888888888899999998
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhh----h-------hHHHHHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHH
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAF----L-------NWRILALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----l-------~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~ 146 (396)
++++|.+..++-..+.++|..+.+.+... + +|+....+.+++.++..+ ..+..+|.++. ++.++
T Consensus 137 ~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~----~~~~~ 212 (473)
T PRK10429 137 DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS----DNQVS 212 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCc----ccccc
Confidence 58899999888766666665554433221 1 467666666665555433 33345664310 00000
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCC
Q 016055 147 SEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGF 226 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (396)
. ++++...+..++.+++++.++..+...++..... .....+.+++.+....
T Consensus 213 ~-------------------------~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~----~~~~~~~~y~~~y~~~ 263 (473)
T PRK10429 213 A-------------------------EGSHLTLKDIVALIYKNDQLSCLLGMALAYNIAS----NIINGFAIYYFTYVIG 263 (473)
T ss_pred c-------------------------cccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHH----HHHhhheeeEEEEECC
Confidence 0 0000011123344455655554444433333322 2222222333332222
Q ss_pred Cch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHH
Q 016055 227 SGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGS 303 (396)
Q Consensus 227 ~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (396)
+.. .......+..+++.++.+++.||+|+|+.+..+..+..++.+.+....... ..+........++.+.
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~l~g~ 336 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA-------PHNALLIVIAGILLNI 336 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC-------chhHHHHHHHHHHHHH
Confidence 222 333444577888889999999999999998777765555544433211000 1122222223333333
Q ss_pred hhccccchhhhhhcccCC-------cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 304 FSLGMGGIPWVIMSEVFP-------INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 304 ~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
......+..+++.+|..+ .+..|..+|.......++..+++.+.|.+.+
T Consensus 337 ~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 337 GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445566788888855 3345668899999999999999999999887
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.80 E-value=5.6e-18 Score=150.61 Aligned_cols=299 Identities=17% Similarity=0.184 Sum_probs=189.5
Q ss_pred hhhhhhHHHHHhhhhch-hhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCC--cch
Q 016055 8 DLLSNVCFFIFWLPCAL-WKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN--LRG 84 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~G-rk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~ 84 (396)
..+++.+++|.++||++ +||++.+..++.++........++++.+++..++..+......|...++..+...++ +-|
T Consensus 49 ~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG 128 (400)
T PF03825_consen 49 ARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYG 128 (400)
T ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCC
Confidence 44667789999999986 688888888888887777778889999888888888888888888888877776532 223
Q ss_pred hHHHHHHHHHHHHHHH-HHHHhhhhh---HHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcc
Q 016055 85 GFTTVHQLMICIGVSM-TYLIGAFLN---WRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADAD 160 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~-~~~l~~~l~---wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
+.-.+-+.++.++... +..+.+..+ ....+++.+...++.....+.+|+.|+.. +.++
T Consensus 129 ~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~---~~~~--------------- 190 (400)
T PF03825_consen 129 RIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKR---SAKE--------------- 190 (400)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCcccc---ccCC---------------
Confidence 3333333333333222 122233322 22455555555555544556678776210 0000
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcC-CCch---hHHHHHH
Q 016055 161 ISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAG-FSGS---IGMIAMV 236 (396)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~ 236 (396)
..++....+..+++|+|+...+++..++.... ......|.+.+.++.| .+.. ....+..
T Consensus 191 -------------~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~----~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~ 253 (400)
T PF03825_consen 191 -------------SVKKLLGLDALKLLKNPRFLVFLLAAFLIGIS----HAAYYTFFSIYLQELGGYSGSTIGILWALGV 253 (400)
T ss_pred -------------CcccccchHHHHHhcCccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccchhhHHHHHHHHHH
Confidence 00011112334677777666555554444432 3444555666677776 4433 3334555
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHH----HHHHHhhccccchh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVL----VYTGSFSLGMGGIP 312 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 312 (396)
+.+++.-...+++.+|+|.|+++.++....++=..++... .++........ ..-+..........
T Consensus 254 ~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~-----------~~~~~~~~~~~~l~q~lhG~tf~~~~~a~ 322 (400)
T PF03825_consen 254 VAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF-----------SDPWPFIVALQLLGQLLHGLTFGLFHAAS 322 (400)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-----------cCCcHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 7888888899999999999999888887777766666652 12222211111 12222222333455
Q ss_pred hhhhcccCCcCcchhhhHHHHHH-HHHHHHHHHHHhHHHHH
Q 016055 313 WVIMSEVFPINMKGSAGSLVTLV-SWLGSWIISFTFNFLMK 352 (396)
Q Consensus 313 ~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~~~~ 352 (396)
..++.+..|++.|++++++++.. ..+|..+|..+.|++.|
T Consensus 323 ~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 323 VRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 68999999999999999999887 46999999999999999
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.79 E-value=4.3e-18 Score=149.91 Aligned_cols=301 Identities=16% Similarity=0.142 Sum_probs=204.8
Q ss_pred hhHHHHHhhh----hchh-hhHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeecccC-
Q 016055 12 NVCFFIFWLP----CALW-KQTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITP- 79 (396)
Q Consensus 12 ~~~~~G~l~d----r~Gr-k~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~- 79 (396)
.-|+.|.++| |+|| |+.++.+.+..++.+.++-.+++ ....++.-++.+++.......-.++..|+.+
T Consensus 64 ~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d 143 (467)
T COG2211 64 TDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD 143 (467)
T ss_pred hcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC
Confidence 3457788888 4785 56667788889998888877763 4456677888999999999999999999986
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHH
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----------NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIES 147 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----------~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~ 147 (396)
++||.+..++-+.+.++|.++...+...+ ||+....+.+++.++..+. ++..+|.+.. +++.+
T Consensus 144 ~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~---~~~~~-- 218 (467)
T COG2211 144 PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVE---TQPTK-- 218 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc---cccCc--
Confidence 67899999999999999976665544333 6888777777776666543 4445664420 00000
Q ss_pred HHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCC
Q 016055 148 EAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFS 227 (396)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (396)
+..+.+.+..+...++|+.++.......+.+...........+|..+.+++....
T Consensus 219 -------------------------~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~ 273 (467)
T COG2211 219 -------------------------TGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF 273 (467)
T ss_pred -------------------------ccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH
Confidence 0001111223445667776665555444444433333333444444443333333
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcc
Q 016055 228 GSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLG 307 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (396)
+...........+.+.++..++.+|+|+|+++..+.++.+++.+++.+.. .++....+...++.+.....
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~----------~~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP----------AGSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc----------CcchHHHHHHHHHHHHHhhc
Confidence 33455555566677789999999999999999999999888888887751 23344445554566666777
Q ss_pred ccchhhhhhcccCC-------cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 308 MGGIPWVIMSEVFP-------INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 308 ~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..++.+++++|..+ .+..|...|....+..+|.+++..+.|++.+
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999998854 2445788899999999999999999999887
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.79 E-value=7.7e-19 Score=160.64 Aligned_cols=318 Identities=14% Similarity=-0.022 Sum_probs=184.4
Q ss_pred HHHHHhhhhch-----hhhHHhhHHHHHH-HHHHHHHhhchhhHHH-HHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 14 CFFIFWLPCAL-----WKQTMGFSDIVCI-IGWVIIVFSKAAWWLD-LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 14 ~~~G~l~dr~G-----rk~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
+++|+++||++ ||+.++++.++.. +.....+..++..... +.+++.+++.+...+...++..|..+ +++...
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 46999999998 7888888877763 4333333345544444 48899999999999999999999998 544443
Q ss_pred ---HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc
Q 016055 87 ---TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA 159 (396)
Q Consensus 87 ---~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~ 159 (396)
.++.....++|.++++.+++.+ +||..|++.+.+.++..+...+++|++.....+.++++. ..
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~----------~~ 226 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLE----------MN 226 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccch----------hh
Confidence 3333333457888887777766 899999998887776666667778863100000000000 00
Q ss_pred chHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHH
Q 016055 160 DISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMV 236 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 236 (396)
..... .......++...+.++.++++..+......++.+...........++.+ +..|.++. ......+
T Consensus 227 ~~~~~-----~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~---~~lG~s~~~~G~~~~~~~ 298 (468)
T TIGR00788 227 MALLT-----LGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATT---QCLPGGPSFSGMSKVVGN 298 (468)
T ss_pred hhhhh-----hhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEc---ccCCCCcchhhhHHHHHH
Confidence 00000 0000000011112333455554444333333311111111111111111 34566665 5555667
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++.+++....+++.+|++.|+.+.++.++.+++............. ...-...+.......+..........+. ..++
T Consensus 299 v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~-~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~ 376 (468)
T TIGR00788 299 LGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNL-AFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLL 376 (468)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecccc-ccCCCCeeeeeehhHHHHHHHHHHHccH-HHHH
Confidence 8888899999999999999988887777776665443211100000 0000011111222222222233333444 5899
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+..|++.+++.+++.+++.++|..+++.+.+.+.+
T Consensus 377 ~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 377 ARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred HHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888
No 110
>PRK11462 putative transporter; Provisional
Probab=99.79 E-value=1e-17 Score=153.11 Aligned_cols=296 Identities=11% Similarity=-0.001 Sum_probs=173.5
Q ss_pred hhhHHHHHhhhh----chhh-hHHhhHHHHHHHHHHHHHhhch------hhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 11 SNVCFFIFWLPC----ALWK-QTMGFSDIVCIIGWVIIVFSKA------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 11 ~~~~~~G~l~dr----~Grk-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
+.-|+.|.++|| +||| +.++.+.+..+++..++-..++ ...+.+.-++..++.......-.++..|..+
T Consensus 60 i~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~ 139 (460)
T PRK11462 60 ISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITN 139 (460)
T ss_pred HHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcC
Confidence 345678999995 7875 5555677788887766654443 3445666677788888888888899999987
Q ss_pred -CCcchhHHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHH
Q 016055 80 -KNLRGGFTTVHQLMICIGVSMTYLIGAFL-----------NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIE 146 (396)
Q Consensus 80 -~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----------~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~ 146 (396)
++||++..++...+.++|..+++.+...+ +|+....+.+++.+++..+ ....+|.++. +.+
T Consensus 140 d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~-----~~~- 213 (460)
T PRK11462 140 DPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA-----PPT- 213 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC-----Ccc-
Confidence 78899999999999888877776554322 4777666666665555433 3334553210 000
Q ss_pred HHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCC
Q 016055 147 SEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGF 226 (396)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (396)
+...++..+..++|+.++.......+.............+|..+..+...
T Consensus 214 -----------------------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~- 263 (460)
T PRK11462 214 -----------------------------TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE- 263 (460)
T ss_pred -----------------------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-
Confidence 00011234556666666555444334433333223334444444322111
Q ss_pred CchhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhc
Q 016055 227 SGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSL 306 (396)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (396)
..........+..+++.++++++.||+++|+....+.....+....+.+. .. ........ ..++.+.+..
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~-~~~l~g~~~~ 333 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV---PM------QASITMFV-FIFVIGVLHQ 333 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh---ch------hHHHHHHH-HHHHHHHHHH
Confidence 11134445567788889999999999999887654443333322222211 00 11112222 2222333333
Q ss_pred cccchhhhhhcccCC-------cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 307 GMGGIPWVIMSEVFP-------INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
...+..+++.+|..+ .+..|...+.......+|..+++.+.|.+.+
T Consensus 334 ~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 334 LVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666776655 2333455577778899999999999998887
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.77 E-value=1.6e-17 Score=152.33 Aligned_cols=294 Identities=12% Similarity=0.070 Sum_probs=167.3
Q ss_pred hhhhHHHHHhhhhc----hhhhHH-hhHHHHHHHHHHHHH-hh----ch--hhHHHHHHHHHHhhhhhcccccceeeecc
Q 016055 10 LSNVCFFIFWLPCA----LWKQTM-GFSDIVCIIGWVIIV-FS----KA--AWWLDLGRLLVGYGMGLLSYVVPVYIAEI 77 (396)
Q Consensus 10 ~~~~~~~G~l~dr~----Grk~~~-~~~~~~~~~~~~~~~-~~----~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 77 (396)
.+..|+.|+++||. ||||.. ..+.+...+...+.. .. ++ .....+.-++.+++.+...+...++..|.
T Consensus 58 ~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 137 (448)
T PRK09848 58 AFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAM 137 (448)
T ss_pred HHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhh
Confidence 45667899999996 767654 556555554444432 11 11 22344455677888888888777877776
Q ss_pred cCC-CcchhHHHHHHHH-----HHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCCh
Q 016055 78 TPK-NLRGGFTTVHQLM-----ICIGVSMTYLIGAFL------NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKG 144 (396)
Q Consensus 78 ~~~-~~r~~~~~~~~~~-----~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~ 144 (396)
.++ ++|.+..++-..+ ..++..++|.++... +|.....+.++++++.. +.....||+++. +.
T Consensus 138 ~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~-----~~ 212 (448)
T PRK09848 138 TQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR-----IV 212 (448)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC-----Cc
Confidence 654 5688776665543 334555566655432 12111122222222222 223334554310 00
Q ss_pred HHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-
Q 016055 145 IESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS- 223 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (396)
++...+..++++++++.+.......++...... ......+++.++
T Consensus 213 ------------------------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 258 (448)
T PRK09848 213 ------------------------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTF----AVSASSLFYVRYV 258 (448)
T ss_pred ------------------------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHH----HHhhhheeeEeee
Confidence 000112235667777776655554444444322 222233433333
Q ss_pred cCCCchh--H-HHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHH
Q 016055 224 AGFSGSI--G-MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVY 300 (396)
Q Consensus 224 ~~~~~~~--~-~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (396)
.+.+... . .....+..+++.++.+++.||+++|+.+..+..+..++.+.+.+. +..+.........+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~----------~~~~~~~~~~~~~l 328 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV----------SVWSLPVALVALAI 328 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc----------CchhHHHHHHHHHH
Confidence 2433321 1 222235567788899999999999999988887777766555431 01222223333333
Q ss_pred HHHhhccccchhhhhhcccCCcC-------cchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 301 TGSFSLGMGGIPWVIMSEVFPIN-------MKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+.......+...++..|..|.+ .+|...|+.+....+|..+++.+.+.+.+
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455566677888877653 45889999999999999999999998876
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.76 E-value=5.3e-18 Score=147.89 Aligned_cols=330 Identities=15% Similarity=0.152 Sum_probs=184.5
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHH--HHHHHHH-Hhh----chhh-HHHHHHHHHHhhhhhcccccceeeecccCC
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVC--IIGWVII-VFS----KAAW-WLDLGRLLVGYGMGLLSYVVPVYIAEITPK 80 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~--~~~~~~~-~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 80 (396)
-++..|+.|.++||+|.||-++....+. ..+.... .+. .|.+ ..+++-...|+......|...+++.++..
T Consensus 56 ~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr- 134 (412)
T PF01306_consen 56 ALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR- 134 (412)
T ss_dssp HHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH-
T ss_pred HHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH-
Confidence 3456678999999999666554433222 2222221 222 2322 23333444555555556666666555432
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHhhHHHHHHHHHHhc-cCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL---NWRILALIGTIPCLVQLIGLCF-IPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l---~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
+.+.-.|-.-...++|.+++..+++.+ +-+..|++....+++..++.+. -|+.++.....+..++
T Consensus 135 -~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~---------- 203 (412)
T PF01306_consen 135 -RNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA---------- 203 (412)
T ss_dssp -HHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS----------
T ss_pred -HhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc----------
Confidence 223334444455566666666666665 5667788776665555444333 3343321100000000
Q ss_pred CCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHc----CCCch---
Q 016055 157 ADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA----GFSGS--- 229 (396)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 229 (396)
+.++.+.+...+++|+++++.+.+........+ ...-...+.+.... +.+..
T Consensus 204 -----------------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y----~vfdqqf~~y~~~~f~~~~~g~~~~G 262 (412)
T PF01306_consen 204 -----------------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIY----DVFDQQFPIYFASFFQSAGQGNQMYG 262 (412)
T ss_dssp -----------------------HHHHHHHTTSHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHTSSSHHHHHHHHH
T ss_pred -----------------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcccccChhHHh
Confidence 000011123456777777766655444443332 22222233333332 22222
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+.+++...+.+++.+|+|.|+.+.++..++.+=....++. ++++.....-.+-..-+. ...
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-----------~~~~~i~~~klLH~~e~~-l~l 330 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-----------TNPWVISLIKLLHALEFP-LLL 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-------------SHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-----------cchHHHHHHHHHHHHHHH-HHH
Confidence 44555567888888999999999999999988888887777776653 333333333333222222 222
Q ss_pred chhhhhhcccCCcCcchhhhHHH-HHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLV-TLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGR 383 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (396)
....-|+++.+|++..++...+. +...+++..+.+.+.|.+.| .+....+++.+.+.+...++..+.++++++.
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 23348899999999989998886 56688999999999999999 5667788888888777777777666655543
No 113
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1.3e-17 Score=133.92 Aligned_cols=303 Identities=17% Similarity=0.106 Sum_probs=171.5
Q ss_pred hHHHHHhhhh-chhhhHHhhHHHHHHHHHHHHH---hhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHH
Q 016055 13 VCFFIFWLPC-ALWKQTMGFSDIVCIIGWVIIV---FSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTT 88 (396)
Q Consensus 13 ~~~~G~l~dr-~Grk~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 88 (396)
+.++|++.|| +|-|..-++-+.+..++.++++ .++.+|.+.++||+.|+|.-...++-+.|..-|++.||.+.++|
T Consensus 96 cffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfG 175 (459)
T KOG4686|consen 96 CFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFG 175 (459)
T ss_pred eeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhh
Confidence 4578999996 6877766666666667777665 46899999999999999988888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh-hHHHHHHHhhHHHHHHHHH---HhccCCChhHHhhcC-ChHHHHHHHHHHhCCCcchHH
Q 016055 89 VHQLMICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLIG---LCFIPESPRWLAKTG-KGIESEAALQRLRGADADISE 163 (396)
Q Consensus 89 ~~~~~~~lG~~~~~~l~~~l-~wr~~f~~~~~~~~~~~~~---~~~~~e~p~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (396)
+.....-+|..+--.+.+++ +.-.-++-...-..+.+.+ ......+-.-....+ .+++++..+.+
T Consensus 176 lqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~---------- 245 (459)
T KOG4686|consen 176 LQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHL---------- 245 (459)
T ss_pred HHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhh----------
Confidence 99988888876554444433 1111111000001111000 000000000000000 00111111100
Q ss_pred HHHHHHHHHHHHhhccchhHHHhhh-hhhhhHHHHHHHHHHHHHhcchhhhHHhHHHH-HHHcCCCch---hHHHHHHHH
Q 016055 164 EAAEIREYTETLERLSEGGILELFQ-RKYAHSLIVGVGLMVLQQFGGVNGIAFYASSI-FISAGFSGS---IGMIAMVVI 238 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~ 238 (396)
++....+.....|... .+.+|...+.+.++....+ -+....|.+ .+..|+++. ...+.....
T Consensus 246 ---------e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~f----PFi~lg~~fF~~rfGlS~~~a~~i~s~vy~I 312 (459)
T KOG4686|consen 246 ---------EEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWF----PFITLGPMFFQKRFGLSAVSAGNILSTVYGI 312 (459)
T ss_pred ---------hcCcccCCcccccccccCccHHHHHHHHHHHHHHHH----HHhhhhHHHHHHhhCCChhhccchhhhhhhh
Confidence 0000001111111111 2334444444444433222 222223333 445677765 444444556
Q ss_pred HHHHhhHHHHHHhhcCCcceeeecchHHHH-HHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhc
Q 016055 239 QIPMTLLGVLLMDKSGRRPLLLVSAAGTCL-GCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMS 317 (396)
Q Consensus 239 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
+.+.+++.|.++||.|++...+.+..+..+ +...+.+.. .+++..+...- ..+ .......|..++
T Consensus 313 sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~----------lsPy~~m~~lG---Lsy-sllAcslWP~va 378 (459)
T KOG4686|consen 313 SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF----------LSPYTSMTFLG---LSY-SLLACSLWPCVA 378 (459)
T ss_pred hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh----------ccHHHHHHHHh---hhH-HHHHHHHhhhhh
Confidence 777889999999999998776655444333 223333221 22222222111 111 111223567788
Q ss_pred ccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 318 EVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 318 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+.|+++-|++.|.++.+.++|-++.|.+.|.+.|
T Consensus 379 ~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d 413 (459)
T KOG4686|consen 379 SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIAD 413 (459)
T ss_pred hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeec
Confidence 88999999999999999999999999999999998
No 114
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.73 E-value=2.6e-16 Score=137.50 Aligned_cols=361 Identities=14% Similarity=0.045 Sum_probs=221.5
Q ss_pred hhHHHHHhhhhc-hhhhHHhhHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHhhhhhcccccceeeecccCCCc--chhH
Q 016055 12 NVCFFIFWLPCA-LWKQTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL--RGGF 86 (396)
Q Consensus 12 ~~~~~G~l~dr~-Grk~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~ 86 (396)
...++|+++||+ |+|+++.+|.++..+|.++.+.+. +...++++-.+.++|.|..-+...+++.|.+|+++ |-..
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~g 156 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGG 156 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCC
Confidence 445799999997 999999999999999999999884 78899999999999999999999999999998754 6677
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcC-----ChHHHHHHHHHH---
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTG-----KGIESEAALQRL--- 154 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~-----~~~~~~~~~~~~--- 154 (396)
.+++..+.++|.+++|.+.+++ +|+..|...++-....++..+..+..-.+...+. +..+......++
T Consensus 157 Ft~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (498)
T COG3104 157 FTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVM 236 (498)
T ss_pred ccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHH
Confidence 8888999999999999999888 8999999888876666555444332111100000 011111000000
Q ss_pred -hCC---CcchHHHHHHHHHHH----H----HHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH
Q 016055 155 -RGA---DADISEEAAEIREYT----E----TLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI 222 (396)
Q Consensus 155 -~~~---~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (396)
-.. .....++........ . .+..+.+....|--|-...-++.+...+.+..+....+.+..|.....+
T Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~ 316 (498)
T COG3104 237 ILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVN 316 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhc
Confidence 000 000000000000000 0 0000000000111111112223333344455555555666677666554
Q ss_pred Hc----CCCchhHHHHHHHHHHHHhhHHHHHHhhcCCc--ce-----eeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 223 SA----GFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRR--PL-----LLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 223 ~~----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
+. ..++.+..++..+.-++.+++..++..|.+++ .. +.++..+++.+.+++.........+ .+..+.
T Consensus 317 ~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~--~~~~s~ 394 (498)
T COG3104 317 RQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGP--SGLVSV 394 (498)
T ss_pred ccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCcCH
Confidence 43 24455777777777777777777777774433 21 2344555555555555442222210 123456
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHH-------HHHhcccchhHHHHH
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNF-------LMKWSSTGTFFAFSA 364 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~-------~~~~~~~~~~~~~~~ 364 (396)
..++....+.........|+-.+++....|+...+..++........+..++..+.+. .........+...+.
T Consensus 395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~ 474 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGV 474 (498)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHH
Confidence 6667777777888889999999999999999988989988888888888888777763 112333444555555
Q ss_pred HHHhhHhhee
Q 016055 365 ICSLTVLFVA 374 (396)
Q Consensus 365 ~~~~~~~~~~ 374 (396)
...+......
T Consensus 475 v~i~~~~~~~ 484 (498)
T COG3104 475 VAIVIGILLL 484 (498)
T ss_pred HHHHHHHHHH
Confidence 5555554433
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=1.3e-15 Score=141.05 Aligned_cols=150 Identities=12% Similarity=0.042 Sum_probs=113.7
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHH---HHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVI---IVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+.+++.++.|+++||+|||+++..+.++..+.... ...+++...++++|++.|++.+........++.|.+|++.|
T Consensus 297 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~R 376 (490)
T PRK10642 297 IGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIR 376 (490)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 445566778999999999999998887654443322 22345677888899999988777777777888899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhc-----CChHHHHHHHHH
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKT-----GKGIESEAALQR 153 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~-----~~~~~~~~~~~~ 153 (396)
++..++......++..++|.+.+++ +|+.++++..+++++..+..+++||+|+|+.++ +|+||+++.+.+
T Consensus 377 g~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~ 456 (490)
T PRK10642 377 YSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVE 456 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhc
Confidence 9999975444455566777777665 478777776667777766667789999998765 888999999888
Q ss_pred HhC
Q 016055 154 LRG 156 (396)
Q Consensus 154 ~~~ 156 (396)
+++
T Consensus 457 ~~~ 459 (490)
T PRK10642 457 HYD 459 (490)
T ss_pred ccc
Confidence 863
No 116
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=1.2e-14 Score=125.04 Aligned_cols=329 Identities=16% Similarity=0.119 Sum_probs=207.9
Q ss_pred HHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc------hhh--HHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 15 FFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK------AAW--WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 15 ~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.+-|+.||+|-|...+++..+..++..+-..+. .++ ....+..+.+.++-........+..-|++++||..+
T Consensus 98 ~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A 177 (480)
T KOG2563|consen 98 AAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIA 177 (480)
T ss_pred HHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhh
Confidence 478999999999999999999999999877653 344 666888888888877777777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----------hHHH--HHHHhhHHHHHHHH-HHhccCCChhHHhhcCChHHHHHHHHH
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----------NWRI--LALIGTIPCLVQLI-GLCFIPESPRWLAKTGKGIESEAALQR 153 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----------~wr~--~f~~~~~~~~~~~~-~~~~~~e~p~~l~~~~~~~~~~~~~~~ 153 (396)
..+-..+..+|.+++.++...+ .|.. .|+....++.+.+. ..+..+|.|+.- ...+..
T Consensus 178 ~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP-----ps~s~~---- 248 (480)
T KOG2563|consen 178 TVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP-----PSASQA---- 248 (480)
T ss_pred hhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----CchhHh----
Confidence 9999999999999988887766 4554 34433333333322 233334433210 000000
Q ss_pred HhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCC---chh
Q 016055 154 LRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFS---GSI 230 (396)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 230 (396)
...+..-..+.++.++++.+....++..+... .++.....+...+...+.+ .+.
T Consensus 249 -------------------~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g----~F~~l~~~l~~~l~~sgY~~~~aG~ 305 (480)
T KOG2563|consen 249 -------------------ALQDASFPKSIKSCFKNRQFIILAICYGIGLG----LFNSLSTLLNLALCPSGYEGVFAGY 305 (480)
T ss_pred -------------------hhhcCcHHHHHHHHHcCccHHHHHHHHhhhHH----HHHHHHHHhhhccccccCCccccch
Confidence 00011133456777777766544444444333 3444444444333344443 347
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhcCC-cceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 231 GMIAMVVIQIPMTLLGVLLMDKSGR-RPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
......+.+++++.+.|.+.||.+. |++..+......++...+.. .... ....+.+.......+.+..+..
T Consensus 306 ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~-~t~~-------~~~~viv~~t~~~~g~~~~~~~ 377 (480)
T KOG2563|consen 306 IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT-CTLF-------LGDSVIVFTTCGLLGFFGTGYL 377 (480)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-hhcc-------CCceEehhhhHHHHHHhhcCCC
Confidence 7777888999999999999999876 33333333333333211111 1111 2233444555566677788888
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc---ccch-hHHHHHHHHhhHhheeeecCCCCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS---STGT-FFAFSAICSLTVLFVAKLVPETKGR 383 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (396)
|+-.-+..|..-|..-++..|+.+..+++-+.+-..+.+...+ .+ +..+ -+.......+...+..++.++.+++
T Consensus 378 Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 378 PIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred CcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 9888888888767777899999999999999999998888887 33 1332 3333333444444444444443333
No 117
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=4.5e-15 Score=113.29 Aligned_cols=130 Identities=21% Similarity=0.231 Sum_probs=113.9
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcc
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLR 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 83 (396)
.+..+.+++.++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|+++|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 44556677788899999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHH-hccCC
Q 016055 84 GGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL-CFIPE 133 (396)
Q Consensus 84 ~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~-~~~~e 133 (396)
++..++.+....+|..+++.+.+.+ +|++.+++.+...++..+.. +..||
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999998877 89999988877766665443 34454
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.60 E-value=2.2e-13 Score=117.07 Aligned_cols=300 Identities=13% Similarity=0.011 Sum_probs=188.2
Q ss_pred hhHHHHHhhhhch-----hhhHHhh-HHHHHHHHHHHHHhh-----c-------hh--h--HHHHHHHHHHhhhhhcccc
Q 016055 12 NVCFFIFWLPCAL-----WKQTMGF-SDIVCIIGWVIIVFS-----K-------AA--W--WLDLGRLLVGYGMGLLSYV 69 (396)
Q Consensus 12 ~~~~~G~l~dr~G-----rk~~~~~-~~~~~~~~~~~~~~~-----~-------~~--~--~l~~~r~l~G~~~~~~~~~ 69 (396)
.-+.+|+.||+.+ ||..+++ |..+...+..+.+++ . +. + ...+...+.|+|.+...+.
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~ 109 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTS 109 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHH
Confidence 3457899999999 7766654 666666655555442 2 22 1 2344567889999999999
Q ss_pred cceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhh--HHHHHHHHHHhccCCChhHHhhcC
Q 016055 70 VPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGT--IPCLVQLIGLCFIPESPRWLAKTG 142 (396)
Q Consensus 70 ~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~--~~~~~~~~~~~~~~e~p~~l~~~~ 142 (396)
..+++.|..|+|+|+++.++.....-+|.+++..+.+.+ .-|..-.+.. +..+...++..+=.|.++....+.
T Consensus 110 ~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~ 189 (403)
T PF03209_consen 110 FLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAA 189 (403)
T ss_pred HHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccC
Confidence 999999999999999999999999999999999988876 2232222222 222222222222233221000000
Q ss_pred ChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH
Q 016055 143 KGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI 222 (396)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (396)
+ ++++......+++...++..+++....++.....+.-...+- |+=-+
T Consensus 190 ~-----------------------------~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLE---Pygg~ 237 (403)
T PF03209_consen 190 A-----------------------------ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILE---PYGGE 237 (403)
T ss_pred C-----------------------------CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcC---CchhH
Confidence 0 000111223455666666666666655555543322221111 23334
Q ss_pred HcCCCch---hHHHHHHHHHHHHhhHHHHHHh-hcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHH
Q 016055 223 SAGFSGS---IGMIAMVVIQIPMTLLGVLLMD-KSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVL 298 (396)
Q Consensus 223 ~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (396)
..|++.+ ..+...+.+.++|....+++.. |.++++....++....++..++..... ..+...+....
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~---------~~~~~~~~~~~ 308 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP---------LGSPWLFRPGV 308 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh---------cccchHHHHHH
Confidence 4567665 5666777888888888888776 566777666777777777666655432 12223333333
Q ss_pred HHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 299 VYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
++.+...+.......+...+..++++.|..+|.-...+.+...++..+.|.+.|
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444445777788888899999999999999999999999999988
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.56 E-value=1.8e-13 Score=122.95 Aligned_cols=302 Identities=16% Similarity=0.174 Sum_probs=188.6
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHh--hhhhcccccceeeecccCCCcchhH
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY--GMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~--~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.++..+..|.++||+|||..+....+...+..+...+.. +|.++ +.|+ +.+.......++++|....++|...
T Consensus 75 ~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~ 149 (463)
T KOG2816|consen 75 TLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSS 149 (463)
T ss_pred HHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHH
Confidence 345667899999999999999999999988888777655 33333 4443 3345667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHH-HHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcch
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQL-IGLCFIPESPRWLAKTGKGIESEAALQRLRGADADI 161 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (396)
.++.......+..++|.+++.. +.-..|.+..+..++.. ....++||+... +++.+ ....+......+
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~---~~~~~~~~~~~~- 222 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSD---ATLRELTPGSLD- 222 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---ccccc---ccccccCCCccc-
Confidence 9999999999999999999887 66677777777766664 456678887421 11100 000000000000
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHH---hcchh-hhHHhHHHHHHHcCCCch---hHHHH
Q 016055 162 SEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQ---FGGVN-GIAFYASSIFISAGFSGS---IGMIA 234 (396)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~ 234 (396)
.......++...+....+..+.......... ..... ...+|. ....+.+.. .....
T Consensus 223 --------------~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl---~~~f~w~~~~~s~~~~~ 285 (463)
T KOG2816|consen 223 --------------SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYL---KAKFGWNKKEFSDLLSL 285 (463)
T ss_pred --------------chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEE---eeecCcCHHHHHHHHHH
Confidence 0000011111111111111222122222211 11111 111221 122355555 34455
Q ss_pred HHHHHHHHhhHHH-HHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 235 MVVIQIPMTLLGV-LLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 235 ~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
.+....++..+.. .+...++.|+....|...-.+......+. +..+....... ...+.....|...
T Consensus 286 ~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----------~~~w~~~~~~v--~~~~~~~~~pa~~ 352 (463)
T KOG2816|consen 286 VSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-----------TETWMMFAAGV--VVALAGIVFPAIR 352 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----------ccchhhhHHHH--HHHhhcchhHHHH
Confidence 5566666666555 77778888887777777777777777763 33333222222 2334555667777
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
+..+...+++++|.++++...+..+...++|.+.+.+..
T Consensus 353 s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 353 AFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999999998865
No 120
>PRK10054 putative transporter; Provisional
Probab=99.48 E-value=6.3e-13 Score=119.74 Aligned_cols=155 Identities=14% Similarity=0.077 Sum_probs=105.7
Q ss_pred HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
++..+++.++.|.+.. .......+..+++.+..|+++||+|||+.+..+.....++.+.+.+. + +
T Consensus 28 ~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-----------~-~ 95 (395)
T PRK10054 28 PFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-----------N-N 95 (395)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-----------h-H
Confidence 3334444556788776 44445556788889999999999999998888777776666655542 2 2
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhH
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTV 370 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (396)
...........+.......+....+..|..|+++|+++.|+.+...++|..++|.+.+.+.+.++...+...+.+..+..
T Consensus 96 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 96 VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPL 175 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 22222222223333334456677888999999999999999999999999999999999887666666666555555443
Q ss_pred hheeeecCCC
Q 016055 371 LFVAKLVPET 380 (396)
Q Consensus 371 ~~~~~~~~~~ 380 (396)
++..+..++.
T Consensus 176 i~~~~~~~~~ 185 (395)
T PRK10054 176 VFIQIWVQRS 185 (395)
T ss_pred HHHHHHHhcc
Confidence 3333334433
No 121
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.47 E-value=7.3e-13 Score=120.01 Aligned_cols=178 Identities=11% Similarity=0.043 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHH
Q 016055 193 HSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLG 269 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 269 (396)
+......++.+..+........+..|.+.++.+.+.. .......++..++.+..|++.||+|||+.+..+.++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 3344444555555555556666677777788888776 4555566788888999999999999999988888888777
Q ss_pred HHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHH
Q 016055 270 CLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNF 349 (396)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 349 (396)
.....+ .++...+...-++.+.+.....|....++.|.+|+++|+++.++.+....+|..++|.+.+.
T Consensus 87 ~~~~~~------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 87 STATMF------------ATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHH------------hcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665 23344444455556666666667777889999999999999999999999999999999998
Q ss_pred HHH-------hcccchhHHHHHHHHhhHhheeeecCCCCC
Q 016055 350 LMK-------WSSTGTFFAFSAICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 350 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (396)
+.+ .++...+.+.++..++...+.++++||+++
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 864 355666666666655555555666676653
No 122
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.47 E-value=2.2e-13 Score=120.71 Aligned_cols=130 Identities=19% Similarity=0.231 Sum_probs=102.3
Q ss_pred cchhhhhhHHHHHhhhhchh-hhHHhhHHHHHHHHHHHH-Hhh---c-hhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 6 HSDLLSNVCFFIFWLPCALW-KQTMGFSDIVCIIGWVII-VFS---K-AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Gr-k~~~~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
-.|-+++.+.+|++..|.++ |+.++.|.++..+++++. +.. + ..+.++++|++.|+|.+. ....-+|+++...
T Consensus 81 slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~ 159 (488)
T KOG2325|consen 81 SLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADAST 159 (488)
T ss_pred HHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccC
Confidence 34567778889999999996 889999999999999998 432 3 577889999999999755 4667789999888
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhh------h-----------HHHHHHHhhHHHHHHHH-HHhccCCChh
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYLIGAFL------N-----------WRILALIGTIPCLVQLI-GLCFIPESPR 136 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~l------~-----------wr~~f~~~~~~~~~~~~-~~~~~~e~p~ 136 (396)
.++|.++++....+..+|.++||.+...+ | +..+-++.+++.++.++ +..+++|.++
T Consensus 160 ~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 160 VEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred ccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 89999999999999999999999887766 1 23456667776666644 4455777653
No 123
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.46 E-value=1.3e-12 Score=119.34 Aligned_cols=168 Identities=11% Similarity=0.059 Sum_probs=117.6
Q ss_pred HHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHH
Q 016055 200 GLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALS 276 (396)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 276 (396)
.+.++...........+.|.+.++.+.+.. .......++..++.++.|++.||+|||+.+.++..+..++.++....
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 108 (434)
T PRK11663 29 YLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS 108 (434)
T ss_pred HHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 333333333334556677888888888765 45556667888999999999999999999988888887777666552
Q ss_pred HHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcc
Q 016055 277 FLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSS 355 (396)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~ 355 (396)
++...+....++.+...+...+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+ .++
T Consensus 109 ------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 176 (434)
T PRK11663 109 ------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGW 176 (434)
T ss_pred ------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence 2233333333344444444556677899999999999999999999999999999999999888 555
Q ss_pred cchhHHHHHHHHhhHhheeeecCC
Q 016055 356 TGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
...+.+.+++..+..++..+..+|
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 555655555544444333333444
No 124
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.45 E-value=1e-11 Score=108.27 Aligned_cols=315 Identities=14% Similarity=0.138 Sum_probs=184.2
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTV 89 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 89 (396)
+....+...+.|..+.|++++++.+...+...+..+.++...+-+..++-|++.+. ..+-++|+-...|+++-.++.+.
T Consensus 55 l~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~ 133 (412)
T PF01770_consen 55 LAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSY 133 (412)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHH
Confidence 44556689999999999999999999999999999999999999999999998866 57777888888899998999999
Q ss_pred HHHHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCc-chH
Q 016055 90 HQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADA-DIS 162 (396)
Q Consensus 90 ~~~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 162 (396)
..++.-+|..++..+|..+ +.+...++......++++..+++|..++...-+++.++... .++...++. +.+
T Consensus 134 ~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~~~~~~~~~~~ 212 (412)
T PF01770_consen 134 TRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD-ANESESDKMNESP 212 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc-ccccccccccccc
Confidence 9988888888888888876 56777777666666667777778876654332222211111 000000000 000
Q ss_pred HHHHHHHHHHHHHh-------hccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCc---h---
Q 016055 163 EEAAEIREYTETLE-------RLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSG---S--- 229 (396)
Q Consensus 163 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 229 (396)
++..+.++..+..+ ..-...+++..+++ .++...+.+....+++.....|.+.+.++...+. .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~----~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG 288 (412)
T PF01770_consen 213 ESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNP----RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNG 288 (412)
T ss_pred ccccccccCcccccchHHHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccch
Confidence 00000000000000 00111223333333 3333444555555567777788887777662111 1
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHH--HHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGT--CLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (396)
..-....+.+.++.+..|++..++.+..-+..+..-. +...+++... .+.+.......++...+..
T Consensus 289 ~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t-----------~~Iwv~Y~~yIif~~~y~f- 356 (412)
T PF01770_consen 289 AVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT-----------GNIWVCYAGYIIFRSLYMF- 356 (412)
T ss_pred HHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHH-
Confidence 3444445566667777888755555433222222222 2222222221 3344455555555544443
Q ss_pred ccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHH
Q 016055 308 MGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWI 342 (396)
Q Consensus 308 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 342 (396)
..++...-++.....+.-+..+|+......+-..+
T Consensus 357 liTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 357 LITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 33333344555555666777777776655444433
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.45 E-value=1.4e-12 Score=124.09 Aligned_cols=179 Identities=15% Similarity=0.121 Sum_probs=121.8
Q ss_pred hhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHH
Q 016055 190 KYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGT 266 (396)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 266 (396)
+..+..+..+.+..+....-...+....|.+..+.+.+.. .......++.+++.++.|+++||+|||+.+.++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3344444444444443322234455667777777777665 5556667899999999999999999999998888777
Q ss_pred HHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 016055 267 CLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFT 346 (396)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 346 (396)
+++.++..+ .++...+....++.+.+..+..+...+++.|.+|++.|+...++.+....+|.++++.+
T Consensus 243 ~i~~ll~af------------a~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~l 310 (742)
T TIGR01299 243 GFFAFFSSF------------VQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAM 310 (742)
T ss_pred HHHHHHHHH------------HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776666554 22344444455566666666678888999999999999999999999999999999987
Q ss_pred hHHHHH-hc------------ccchhHHHHHHHHhhHhheeeecCCC
Q 016055 347 FNFLMK-WS------------STGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 347 ~g~~~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
...+.. .+ .+..++.+.++..+..++..+++||+
T Consensus 311 a~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 311 AWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPES 357 (742)
T ss_pred HHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 766554 11 12233344444444444555566765
No 126
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.8e-12 Score=112.38 Aligned_cols=172 Identities=23% Similarity=0.140 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHH
Q 016055 195 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCL 271 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 271 (396)
..+...+..+..........-.+|.+-++.+.+.. .....++.+..++.++...+.||++||+++.....+..++.+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Confidence 33444455555555577778888999999999876 777888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 272 LAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
+..+ .+++..+...-+..+...+.+.++..+...++.|+++|+++.++......++..+|.+++.++.
T Consensus 94 l~al------------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 94 LSAL------------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHH------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 8887 5666777777777777777888888899999999999999999999999999999999999999
Q ss_pred H-hcccchhHHHHHHHHhhHhheeeecC
Q 016055 352 K-WSSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 352 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
| .++...|+..+.+..+..+..+..+|
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 78889999999998888888888888
No 127
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.42 E-value=6.2e-13 Score=120.28 Aligned_cols=318 Identities=15% Similarity=0.082 Sum_probs=170.1
Q ss_pred HHHHHhhhhc---h--hhhHHhhHHHHHHHHHHHHHhh----chhhHHHHHHHHHHhhhhhcccccceeeecccC--CCc
Q 016055 14 CFFIFWLPCA---L--WKQTMGFSDIVCIIGWVIIVFS----KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP--KNL 82 (396)
Q Consensus 14 ~~~G~l~dr~---G--rk~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~ 82 (396)
|+.|.++|-+ | ||+-++++.++..++.+..+.. .+.....+.-++..+|.+.....+.+++.|... +++
T Consensus 42 p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 42 PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4789999976 3 6666677777776666655553 356667777788899999999999999999884 334
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
||...+.......+|.+++..+++.+ ++|..|.+.+++..+..+...+++|..+ . .+.++....
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~-~---~~~~~~~~~-------- 189 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERK-V---RPADEVFSF-------- 189 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcc-c---cccchhhcc--------
Confidence 77888888888899999998888877 7888888877766665544444333210 0 000000000
Q ss_pred cchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHH-HHHHHHHHHhcchhh-hHHhHHHHHHHcCCCchhH---HH
Q 016055 159 ADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIV-GVGLMVLQQFGGVNG-IAFYASSIFISAGFSGSIG---MI 233 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~ 233 (396)
.++ ..+......++.....++.++.+..+.... ..++...... .... ..++..+.....++++... ..
T Consensus 190 ---~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~a~~fy~~~~~~~gp~fs~~f~~~~~~ 262 (433)
T PF03092_consen 190 ---GKE---EVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPS-ISSASSFYFQTDALGGPHFSPSFYGTLSI 262 (433)
T ss_pred ---ccc---ccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccC-CCCccEEEEEeccccccccCHHHHHHHHH
Confidence 000 000000000111122344444443333323 1111111111 1111 1122222121122555432 23
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhh
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPW 313 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
+..++.++|..+......+..-|+++....++..+..+.-.... ...+....-...+..+.-..+..........|..
T Consensus 263 vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv-~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~l- 340 (433)
T PF03092_consen 263 VGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLV-TRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSL- 340 (433)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEE-EEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHH-
Confidence 33445555555555555555556555444433332222111100 0000000000011112222222233333344444
Q ss_pred hhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 314 VIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 314 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+++|+.|+...|+.+++..++.++|..++..+...+.+
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999888877
No 128
>TIGR00895 2A0115 benzoate transport.
Probab=99.42 E-value=1.6e-12 Score=117.63 Aligned_cols=159 Identities=23% Similarity=0.196 Sum_probs=115.9
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
......+.|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++..+...
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~----------- 101 (398)
T TIGR00895 33 LAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL----------- 101 (398)
T ss_pred HHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-----------
Confidence 44556677888888887765 4455556788899999999999999999988887777776665554
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAI 365 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~ 365 (396)
..+...+....++.+.......+...++..|.+|+++|+++.++.+....+|..++|.+.+.+.+ .++...+.+.+.+
T Consensus 102 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 180 (398)
T TIGR00895 102 -ATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIA 180 (398)
T ss_pred -ccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhH
Confidence 22333344444555555566677788999999999999999999999999999999999999887 4555555555444
Q ss_pred HHhhHhheeeecCCC
Q 016055 366 CSLTVLFVAKLVPET 380 (396)
Q Consensus 366 ~~~~~~~~~~~~~~~ 380 (396)
..+...+.....|++
T Consensus 181 ~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 181 PLLLLLLLMRFLPES 195 (398)
T ss_pred HHHHHHHHHHhCCCC
Confidence 444444444445554
No 129
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.42 E-value=1.9e-12 Score=116.70 Aligned_cols=159 Identities=19% Similarity=0.111 Sum_probs=115.3
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+..++.......
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------- 90 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS----------- 90 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 3344445677778888765 45556667888999999999999999999988877777776665542
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
++...+....++.+.......+....++.|.+|+++|++..++.+....+|..++|.+.+.+.+ .++...++..+.+.
T Consensus 91 -~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 169 (385)
T TIGR00710 91 -NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAG 169 (385)
T ss_pred -ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 2333344444455555555566777899999999999999999999999999999999998888 45555566656555
Q ss_pred HhhHhheeeecCCCC
Q 016055 367 SLTVLFVAKLVPETK 381 (396)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (396)
.+..+...+..||++
T Consensus 170 ~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 170 ILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHhCCCCC
Confidence 555554444555544
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=3.1e-12 Score=115.34 Aligned_cols=155 Identities=21% Similarity=0.081 Sum_probs=112.3
Q ss_pred HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
....|.+.++.+.+.. .......+...++.+..|++.||+|||+.+..+..+.+++....... ++
T Consensus 29 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------~~ 96 (390)
T PRK03545 29 VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA------------WN 96 (390)
T ss_pred HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh------------cc
Confidence 3345777888888776 33444556677888899999999999999999888888777766652 23
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
...+....+..+.......+...++..|.+|+++|++++|+......+|..++|.+.+.+.+ .++...+++.+.+..+.
T Consensus 97 ~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~ 176 (390)
T PRK03545 97 FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALIT 176 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 33333333444444444556667889999999999999999999999999999999998887 46666677766665555
Q ss_pred HhheeeecCCC
Q 016055 370 VLFVAKLVPET 380 (396)
Q Consensus 370 ~~~~~~~~~~~ 380 (396)
........|+.
T Consensus 177 ~~~~~~~~~~~ 187 (390)
T PRK03545 177 LLLLIKLLPLL 187 (390)
T ss_pred HHHHHHhCCCC
Confidence 44444444543
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.42 E-value=3.8e-12 Score=115.53 Aligned_cols=175 Identities=17% Similarity=0.144 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHH
Q 016055 193 HSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLG 269 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 269 (396)
++......+..+.............+.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444444455555544556666677777788888765 5555666788899999999999999999988887777777
Q ss_pred HHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHH
Q 016055 270 CLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNF 349 (396)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 349 (396)
.+...+ .++...+....++.+.......+...+++.|.+|+++|+++.++.+....+|..+++.+.+.
T Consensus 91 ~~~~~~------------~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 91 TLACGF------------APGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHH------------hccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666554 22334444455555655566667777899999999999999999999999999999999998
Q ss_pred HHHh-c--ccchhHHHHHHHHhhHhheeeecCCC
Q 016055 350 LMKW-S--STGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 350 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
+.+. + +...+.+ .++..+...+.....||+
T Consensus 159 l~~~~~~~w~~~f~~-~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 159 VVPVWGDGWRALFFI-SILPIIFALWLRKNIPEA 191 (405)
T ss_pred HHHhcCccHHHHHHH-HHHHHHHHHHHHHhCCCC
Confidence 8773 2 3333333 333333333333444554
No 132
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=2.8e-12 Score=110.02 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=143.7
Q ss_pred hhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHH
Q 016055 192 AHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCL 268 (396)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 268 (396)
++..++..++.+..++..-..+..-.|.+.++.+++.. ...+...+..-++..+.|.++||.+.|+.+..++++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 34455555555555544455666777888888878776 566667788889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh-
Q 016055 269 GCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF- 347 (396)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~- 347 (396)
..+++++ .++...+.....+.+.+.+.-.|.+...+..-+|+++||+..++-|+..++|+.+.|.+.
T Consensus 107 ~nil~Gf------------s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~ 174 (448)
T COG2271 107 VNILFGF------------SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL 174 (448)
T ss_pred HHHHHhh------------hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH
Confidence 9999998 445666677777778888777788889999999999999999999999999999999999
Q ss_pred -HHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCC
Q 016055 348 -NFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 348 -g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (396)
+.+.+ .+....++.-+++.++.+++.++..+++++
T Consensus 175 la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 175 LAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 88777 466677778888888888887777766543
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=2.4e-12 Score=116.41 Aligned_cols=159 Identities=18% Similarity=0.148 Sum_probs=118.8
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+..++.......
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------- 79 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA----------- 79 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----------
Confidence 3445555667777777765 56666778889999999999999999999988888777777766652
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
.+...+....++.+.+.....+....++.|.+|+++|++.+++.+....+|..++|.+.+.+.+ .++...+...+.+.
T Consensus 80 -~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 80 -GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred -cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 2344444555555666666677778999999999999999999999999999999999998777 55555666666655
Q ss_pred HhhHhheeeecCCCC
Q 016055 367 SLTVLFVAKLVPETK 381 (396)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (396)
.+..++.....++++
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 159 IIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHhhheecCCC
Confidence 555555544555443
No 134
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.40 E-value=4.5e-12 Score=114.16 Aligned_cols=155 Identities=17% Similarity=0.152 Sum_probs=113.7
Q ss_pred HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
....|.+.++.+.++. .......+...++.++.|++.||+|||+.+..+..+.+++.+.... .++
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~------------~~~ 107 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF------------ANS 107 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH------------HCh
Confidence 3345667788888776 4445566788889999999999999999999998888887766654 233
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
...+....++.+.......+....++.|.+|+++|+.+.++.....++|..++|.+.+.+.+ .++...++..+.+..+.
T Consensus 108 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 108 FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 44444444555555555667777899999999999999999999999999999999999988 45555666655544443
Q ss_pred HhheeeecCCC
Q 016055 370 VLFVAKLVPET 380 (396)
Q Consensus 370 ~~~~~~~~~~~ 380 (396)
.+......||+
T Consensus 188 ~l~~~~~~p~~ 198 (394)
T PRK10213 188 IFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHCCCC
Confidence 33333334543
No 135
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.40 E-value=3.3e-14 Score=130.86 Aligned_cols=337 Identities=16% Similarity=0.156 Sum_probs=3.0
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh----c-----------------------------------
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS----K----------------------------------- 47 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~----~----------------------------------- 47 (396)
.+.++..++..++.+|..|-|.+-.|.++.+++++++++- +
T Consensus 49 i~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 128 (539)
T PF03137_consen 49 IGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQD 128 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCcccc
Confidence 4455566668888888888888899999999998886541 0
Q ss_pred -----------hhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh--------
Q 016055 48 -----------AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL-------- 108 (396)
Q Consensus 48 -----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-------- 108 (396)
-+..++++.++.|+|....++...+|+-|..++++-+...|+..+...+|+++|..+++..
T Consensus 129 ~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~ 208 (539)
T PF03137_consen 129 CCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFP 208 (539)
T ss_dssp -----------------------SSS------------------------------------------------------
T ss_pred ccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCc
Confidence 1345788999999999999999999999999999999999999999999999999998765
Q ss_pred ------------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHH
Q 016055 109 ------------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIRE 170 (396)
Q Consensus 109 ------------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (396)
.|..-|++.+.+.++..+..+.+|++.+-.. +..++.+...++ .++ ..+++..+.++
T Consensus 209 ~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~--~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 283 (539)
T PF03137_consen 209 KVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTS--ERQEEKESSERK--EED-SDKDSFKDPKS 283 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcc--cccchhhhhhcc--hhh-hhhhccccccc
Confidence 1555555556555555555555665432110 000000000000 000 00000000000
Q ss_pred H--HHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCchhHHHHHH----HHHHHHh
Q 016055 171 Y--TETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGSIGMIAMV----VIQIPMT 243 (396)
Q Consensus 171 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~ 243 (396)
. .....++-....+++++|+.+... .+..............+.|.+.+ +.+.+++......+ .+.++|.
T Consensus 284 ~~~~~~~~~df~~~l~~Ll~Np~f~~~----~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~ 359 (539)
T PF03137_consen 284 KKSFGKSIKDFPKALKRLLTNPVFMCL----ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGI 359 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchhhhhhhHHHHHHHHhcChHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheeh
Confidence 0 001112223345556666554333 33333333345556666666554 45776664444444 3566888
Q ss_pred hHHHHHHhhcC--CcceeeecchHHHHHHHHHH--------------HHHHHH------h-hh-----------------
Q 016055 244 LLGVLLMDKSG--RRPLLLVSAAGTCLGCLLAA--------------LSFLFQ------D-LQ----------------- 283 (396)
Q Consensus 244 ~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~--------------~~~~~~------~-~~----------------- 283 (396)
+++|++.+|++ .|+......+...++.+... ....+. . .+
T Consensus 360 llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~ 439 (539)
T PF03137_consen 360 LLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSAT 439 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred heEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCccccc
Confidence 99999999975 34444333333333332210 000010 0 00
Q ss_pred -hcccc---hhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHH-HHHHHHHHHhHHHHH
Q 016055 284 -QWIKA---TPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSW-LGSWIISFTFNFLMK 352 (396)
Q Consensus 284 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~~~~ 352 (396)
...+. ..........++..+............+.+.+|+++|+.+.|+...+.+ +|.+-+|.++|.+.|
T Consensus 440 ~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 440 PGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp --------------------------------------------------------------------------
T ss_pred CCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 00000 1112222222222222222233334667789999999999999988865 688999999999998
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=4.4e-12 Score=115.11 Aligned_cols=159 Identities=23% Similarity=0.159 Sum_probs=112.3
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
........|.+.++.+.++. .......++..++.++.|+++||+|||+.+..+..+..++.+....
T Consensus 31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----------- 99 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ----------- 99 (406)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-----------
Confidence 44556666777888888765 5555666788899999999999999999998887777666655544
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAI 365 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~ 365 (396)
..+...+....++.+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+ .++...+++.+.+
T Consensus 100 -~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (406)
T PRK11551 100 -AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVG 178 (406)
T ss_pred -hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 22333344444455555555566777899999999999999999999999999999998877766 3444455555544
Q ss_pred HHhhHhheeeecCCC
Q 016055 366 CSLTVLFVAKLVPET 380 (396)
Q Consensus 366 ~~~~~~~~~~~~~~~ 380 (396)
..+...+...+.||+
T Consensus 179 ~~~~~~~~~~~l~~~ 193 (406)
T PRK11551 179 PLLLVPLLMRWLPES 193 (406)
T ss_pred HHHHHHHHHHhCCCC
Confidence 444443334445554
No 137
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.38 E-value=4.1e-12 Score=114.69 Aligned_cols=165 Identities=16% Similarity=0.164 Sum_probs=114.8
Q ss_pred HHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHh
Q 016055 205 QQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQD 281 (396)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (396)
.............|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+.....++.......
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~----- 88 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA----- 88 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-----
Confidence 3333344555677888888888776 44455566778889999999999999999888877777776665542
Q ss_pred hhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhH
Q 016055 282 LQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFF 360 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~ 360 (396)
++...+....++.+.......+....++.|.+|+++|+++.+..+....++..++|.+.+.+.+ .++...+.
T Consensus 89 -------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~ 161 (392)
T PRK10473 89 -------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFY 161 (392)
T ss_pred -------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHH
Confidence 2222233333344444444455667899999999999999999999999999999999888776 45555566
Q ss_pred HHHHHHHhhHhheeeecCCCC
Q 016055 361 AFSAICSLTVLFVAKLVPETK 381 (396)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~ 381 (396)
+.+.+..+..++.....+|++
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 666555555555444455543
No 138
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.37 E-value=4.2e-12 Score=112.91 Aligned_cols=150 Identities=19% Similarity=0.189 Sum_probs=113.3
Q ss_pred hhhHHhHH-HHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 211 NGIAFYAS-SIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 211 ~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
.......+ .+.++.+.+.. .......+...++.++.|+++||+|||+.+..+..+.+++.....+.
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---------- 82 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA---------- 82 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh----------
Confidence 33444455 56666676665 55566667889999999999999999998888888888874444431
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAI 365 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~ 365 (396)
.+.+ .+....++.+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+ .++...+++.+.+
T Consensus 83 -~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 83 -SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp -CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred -hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 2233 555555566666667778888999999999999999999999999999999999999886 5666777777777
Q ss_pred HHhhHhh
Q 016055 366 CSLTVLF 372 (396)
Q Consensus 366 ~~~~~~~ 372 (396)
..+..++
T Consensus 161 ~~~~~il 167 (352)
T PF07690_consen 161 SLIAAIL 167 (352)
T ss_dssp HHHHHHH
T ss_pred hhhhhhh
Confidence 7666554
No 139
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.36 E-value=3.2e-12 Score=118.92 Aligned_cols=160 Identities=16% Similarity=0.153 Sum_probs=121.4
Q ss_pred chhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhc
Q 016055 209 GVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW 285 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
.........|.+.++.+.+.. +......++..++.++.|++.||+|||+.+..+..+..++..+...
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---------- 86 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV---------- 86 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC----------
Confidence 345566777888888887654 6666777889999999999999999999998888888777776654
Q ss_pred ccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHH
Q 016055 286 IKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSA 364 (396)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~ 364 (396)
.++...+....++.+.......+...+++.|.+|+++|+++.++......+|..++|.+.+.+.+ .++.+.++..+.
T Consensus 87 --~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~ 164 (485)
T TIGR00711 87 --APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVP 164 (485)
T ss_pred --cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhH
Confidence 33444455555666666666677888999999999999999999999999999999999999988 555666666555
Q ss_pred HHHhhHhheeeecCCC
Q 016055 365 ICSLTVLFVAKLVPET 380 (396)
Q Consensus 365 ~~~~~~~~~~~~~~~~ 380 (396)
+..+...+..+..|++
T Consensus 165 ~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 165 IGIIVVVVAFFILPRD 180 (485)
T ss_pred HHHHHHHHHHHHcCCc
Confidence 5544444444444543
No 140
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.9e-12 Score=112.09 Aligned_cols=184 Identities=15% Similarity=0.115 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHH
Q 016055 195 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCL 271 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 271 (396)
......+....+..--+.+..-.+...+..+.++. +......+...+.+++.|++.||++||+++.+|..+..++.+
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 33444445555544455555555566556666655 677777888999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 272 LAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
...+ ....+.+...-.+.+.+...+.|+..++++|.+|.++|++.+++.+....+|..+|-.+...+.
T Consensus 114 ~~~f------------s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 114 ASGF------------SNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHH------------HHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 8877 3455666666777788888999999999999999999999999999999999999988888777
Q ss_pred H--hcccchhHHHHHHHHhhHhheeeecCCCCCCChHHHHh
Q 016055 352 K--WSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLEEIQA 390 (396)
Q Consensus 352 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (396)
+ ..+++.+...+++..+++++..++.+|.+++..++.+.
T Consensus 182 ~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~ 222 (493)
T KOG1330|consen 182 SLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDG 222 (493)
T ss_pred cCccceEEEEEeehHHHHHHHHHHHhhccCccccccccccc
Confidence 7 23677788888888888888888888877655444433
No 141
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=2.1e-11 Score=111.03 Aligned_cols=184 Identities=15% Similarity=0.074 Sum_probs=115.7
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceee
Q 016055 184 LELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLL 260 (396)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 260 (396)
+...+++.++.......+..+. ........|.+.++.+.++. .......+...++.++.|+++||+|||+.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~ 86 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFG----LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL 86 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE
Confidence 3344455555544443443332 33445556666666555554 5556666888899999999999999999998
Q ss_pred ecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHH
Q 016055 261 VSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGS 340 (396)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 340 (396)
.+..+.+++...+....... .++...+....++.+.......+....+..|..|+++|+++.++.+....+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLP-------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS 159 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence 88777766665544321100 12233333333333433333445556888999999999999999999999999
Q ss_pred HHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCC
Q 016055 341 WIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 341 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
.++|.+.+.+.+ .++.+.+.+.+....+. .+.....|+
T Consensus 160 ~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 198 (417)
T PRK10489 160 VISPALGGLLIAAGGVAWNYGLAAAGTFIT-LLPLLRLPA 198 (417)
T ss_pred HhHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHhCCC
Confidence 999999999887 34445554444433333 333334444
No 142
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=1.7e-11 Score=110.72 Aligned_cols=165 Identities=12% Similarity=-0.034 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHH
Q 016055 194 SLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGC 270 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 270 (396)
+......+.++.............|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333333344444433345666677888888888776 44555667888999999999999999998888777777776
Q ss_pred HHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 271 LLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
.+... .++...+.....+.+.......+....++.|.+|+++|+...+..+....+++.++|.+.+.+
T Consensus 87 ~l~~~------------~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 87 AGLMF------------SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHH------------cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 223333334444444444444556668889999999999999999888889999999998887
Q ss_pred HH--hcccchhHHHHHHHHhhH
Q 016055 351 MK--WSSTGTFFAFSAICSLTV 370 (396)
Q Consensus 351 ~~--~~~~~~~~~~~~~~~~~~ 370 (396)
.+ .++...+...+.+.++..
T Consensus 155 ~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 155 LARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HhccccHHHHHHHHHHHHHHHH
Confidence 65 355555655555544433
No 143
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.35 E-value=1.5e-11 Score=111.01 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=108.3
Q ss_pred hHHhHHHHHHHcCCCchhHHHH---HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch
Q 016055 213 IAFYASSIFISAGFSGSIGMIA---MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT 289 (396)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
.++..+++.++.+.+....... ..+...+..++.|+++||+|||+.+..+.....++.+..... +
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~------------~ 97 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA------------H 97 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh------------c
Confidence 3344444556678877644443 345556668899999999999999988888888877766542 2
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhh
Q 016055 290 PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLT 369 (396)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (396)
+...+.....+.+.......|...+++.|.+|+++|+++.|+.+...++|..++|.+.+.+.+.++...+++.+....+.
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLA 177 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 23333334444444444455666788999999999999999999999999999999999998766666666655555444
Q ss_pred HhheeeecCC
Q 016055 370 VLFVAKLVPE 379 (396)
Q Consensus 370 ~~~~~~~~~~ 379 (396)
.++.....|+
T Consensus 178 ~i~~~~~~~~ 187 (400)
T PRK11646 178 AAFNAWLLPA 187 (400)
T ss_pred HHHHHHhCCc
Confidence 4433334444
No 144
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.35 E-value=5.4e-12 Score=113.39 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=115.9
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
........|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS---------- 80 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh----------
Confidence 34455566777777787765 55566678888999999999999999999998888888777776653
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHH-HhHHHHH-hcccchhHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISF-TFNFLMK-WSSTGTFFAFSA 364 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~-~~g~~~~-~~~~~~~~~~~~ 364 (396)
.+...+....++.+.+.....+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+ .++...+...+.
T Consensus 81 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 81 --TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred --hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 233444445555566666667788899999999999999999999999999999994 5555555 445555665665
Q ss_pred HHHhhHhheeeecCCC
Q 016055 365 ICSLTVLFVAKLVPET 380 (396)
Q Consensus 365 ~~~~~~~~~~~~~~~~ 380 (396)
+..+..++.....+++
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 159 IAIIVSLICFLLLRDS 174 (379)
T ss_pred HHHHHHHHHheeeCCC
Confidence 5555555555555543
No 145
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.34 E-value=9.8e-12 Score=115.45 Aligned_cols=174 Identities=16% Similarity=0.092 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHH
Q 016055 195 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCL 271 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 271 (396)
.+....+..+....-.+....-.|.+.++.+.+.. +....+.++...+.+..|+++||+|||+.+..+..+..++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 33444444444444456677778888888887654 555566677788889999999999999999999998888888
Q ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccC-CcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 272 LAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVF-PINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
.... .++...++..-.+.+.+.....+.......+.+ |+++|++++|+......+|..++|.+.+.+
T Consensus 87 ~~~~------------a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l 154 (495)
T PRK14995 87 AAAF------------SPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154 (495)
T ss_pred HHHH------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776 334444444445555555555555555555554 678999999999999999999999999999
Q ss_pred HH-hcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 351 MK-WSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
.+ .++.+.+++...+..+..++..+..|+.
T Consensus 155 ~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 155 LEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88 4566666666555555544444555554
No 146
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.33 E-value=1.2e-11 Score=111.19 Aligned_cols=159 Identities=14% Similarity=0.066 Sum_probs=115.9
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.|.+.. .......++..++.++.|++.||+|||+.+..+..+.+++.++...
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~------------ 87 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL------------ 87 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH------------
Confidence 3445566777788887765 5566677899999999999999999999999888888887776665
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
.++...+.....+.+.......+.......|.+|+++|+++++.......++..++|.+.+.+.+ .++...+.+.+.+.
T Consensus 88 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 167 (382)
T PRK10091 88 SSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFN 167 (382)
T ss_pred hCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHH
Confidence 33344444444555554444455556778899999999999999999999999999999998887 45556666666555
Q ss_pred HhhHhheeeecCCCC
Q 016055 367 SLTVLFVAKLVPETK 381 (396)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (396)
.+..+......||.+
T Consensus 168 ~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 168 IAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHhCCCCC
Confidence 544444444456543
No 147
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=2.1e-11 Score=111.41 Aligned_cols=149 Identities=19% Similarity=0.148 Sum_probs=108.7
Q ss_pred HHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHH
Q 016055 201 LMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSF 277 (396)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 277 (396)
+..+..........+..+.+.++.+.++. .......++..++.++.|+++||+|||+.+..+....+++.....+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~- 103 (426)
T PRK12307 25 LGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA- 103 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-
Confidence 33333333344455566777777887765 45556668888999999999999999999999988888887766653
Q ss_pred HHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hccc
Q 016055 278 LFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSST 356 (396)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~ 356 (396)
++...+.....+.+.+.....+....++.|.+|+++|+++.++......+|..++|.+.+.+.+ .++.
T Consensus 104 -----------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 104 -----------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred -----------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 2333444444555555555666777889999999999999999999999999999998888777 3444
Q ss_pred chhHH
Q 016055 357 GTFFA 361 (396)
Q Consensus 357 ~~~~~ 361 (396)
..+++
T Consensus 173 ~~f~i 177 (426)
T PRK12307 173 AAFFV 177 (426)
T ss_pred HHHHH
Confidence 44443
No 148
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=1.6e-11 Score=114.60 Aligned_cols=151 Identities=16% Similarity=0.121 Sum_probs=109.9
Q ss_pred HHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHH
Q 016055 198 GVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAA 274 (396)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 274 (396)
...+..+.............|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+.+++.+...
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 33334333333445556666777788888765 455556678888999999999999999998888877777777666
Q ss_pred HHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-
Q 016055 275 LSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW- 353 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~- 353 (396)
+. .+...+.....+.+....+..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 104 ~~------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 104 FA------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HH------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 52 23334444455555555566667778899999999999999999999999999999999988883
Q ss_pred cccchhH
Q 016055 354 SSTGTFF 360 (396)
Q Consensus 354 ~~~~~~~ 360 (396)
++...+.
T Consensus 172 ~w~~~f~ 178 (496)
T PRK03893 172 GWRALFF 178 (496)
T ss_pred CHHHHHH
Confidence 3333333
No 149
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.33 E-value=4.2e-10 Score=99.90 Aligned_cols=307 Identities=15% Similarity=0.101 Sum_probs=177.1
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
..+.+++++.+.+.|+.|.|..+.++...+.......-+ +|-+.++++-.+.|+|.+..+..--.|++|..+++++.+.
T Consensus 61 ~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~N 139 (461)
T KOG3098|consen 61 AFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERN 139 (461)
T ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHH
Confidence 345677788999999999999999999999887766544 6677788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh------------hH-HHHH----------HHhhHHH---HHHHHHHhccCCChhHHhh
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL------------NW-RILA----------LIGTIPC---LVQLIGLCFIPESPRWLAK 140 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l------------~w-r~~f----------~~~~~~~---~~~~~~~~~~~e~p~~l~~ 140 (396)
.++..+....+.++|..+-..+ +- +..+ .+.+++. .+..+...+.|.+. ..
T Consensus 140 isi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~-~~-- 216 (461)
T KOG3098|consen 140 ISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD-VV-- 216 (461)
T ss_pred HHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc-hh--
Confidence 9999999999998887665443 11 1111 1111111 11111122222211 00
Q ss_pred cCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHH---HhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhH
Q 016055 141 TGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGIL---ELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYA 217 (396)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
++.+.. + ....+..+ +++++++...+........+ ........|.
T Consensus 217 ----------------------~~~~~~-~------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~---~~Sf~~~iyp 264 (461)
T KOG3098|consen 217 ----------------------NCKSSS-E------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGL---ETSFWISIYP 264 (461)
T ss_pred ----------------------hhhhhc-c------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHH---HHHHHHhccc
Confidence 000000 0 00111122 22333333222222222222 1123333343
Q ss_pred HHHHHH--cCCCch----hHHHHHHHHHHHHhhHHHHHHhh---cCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc-
Q 016055 218 SSIFIS--AGFSGS----IGMIAMVVIQIPMTLLGVLLMDK---SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK- 287 (396)
Q Consensus 218 ~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (396)
..+.-. .+.+.. ......+++.+.+....+.+.|| +||++.+.++..+..+.+++.....+....-...+
T Consensus 265 t~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~ 344 (461)
T KOG3098|consen 265 TCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDS 344 (461)
T ss_pred hhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcc
Confidence 333222 233333 33344456666666777777765 56788887777777776666655433222100000
Q ss_pred -----chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 288 -----ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
.+............+..-.......+.++.+.+ +++|..+.++...-..++..++-...+..
T Consensus 345 ~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 345 PPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred cccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 111223333444455555566667778888888 56788888888877777776655555443
No 150
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.33 E-value=1.9e-11 Score=110.78 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=109.4
Q ss_pred hHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhH
Q 016055 216 YASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFL 292 (396)
Q Consensus 216 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (396)
-.|.+.++.+.+.. .......++..++.++.|+++||+|||+++..+..+.+++.+.... .++..
T Consensus 38 ~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------------a~~~~ 105 (413)
T PRK15403 38 GIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF------------TTSMT 105 (413)
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH------------cCCHH
Confidence 33455666777665 4555566788889999999999999999998887777776666554 33333
Q ss_pred HHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccchhHHHHHHHHhhHh
Q 016055 293 ALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 371 (396)
.+....++.+.......+....+..|.+|++++++.+++.+....++..++|.+.+.+.+. ++...+++.++...+..+
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4444444444444333455567888999999999999999999999999999999988874 566666666665555544
Q ss_pred heeeecCCCC
Q 016055 372 FVAKLVPETK 381 (396)
Q Consensus 372 ~~~~~~~~~~ 381 (396)
...+..||++
T Consensus 186 ~~~~~lp~~~ 195 (413)
T PRK15403 186 GLLLAMPETV 195 (413)
T ss_pred HHHHhCCCCc
Confidence 4444556654
No 151
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=4.2e-11 Score=110.56 Aligned_cols=155 Identities=17% Similarity=0.038 Sum_probs=101.7
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
......+.|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+.+...++.++....
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---------- 121 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV---------- 121 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh----------
Confidence 33445566778888888766 33445556788889999999999999998877776666665555442
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH----------hccc
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK----------WSST 356 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~----------~~~~ 356 (396)
.+...+....++.+.+.....+ ...++.|.+|+++|++++|+.+...++|..+++.+.+.+.+ .++.
T Consensus 122 --~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr 198 (476)
T PLN00028 122 --SSATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR 198 (476)
T ss_pred --cCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH
Confidence 2222333333334443333333 34678899999999999999998888888888777665532 1455
Q ss_pred chhHHHHHHHHhhHhheeeec
Q 016055 357 GTFFAFSAICSLTVLFVAKLV 377 (396)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~ 377 (396)
..+.+.+++.++..++..++.
T Consensus 199 ~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 199 IAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 566666666555544444333
No 152
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.32 E-value=2.7e-11 Score=109.52 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=107.3
Q ss_pred HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
....|.+.++.+.++. .......+...++.++.|+++||+|||+.+..+.....++...... .++
T Consensus 28 ~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~------------~~~ 95 (394)
T PRK11652 28 VPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF------------AHS 95 (394)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH------------Hcc
Confidence 3345677778888776 4455666788889999999999999999988877777666655543 222
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
...+.....+.+.......+....+..|.+++++++.+.+..+....++..++|.+.+.+.+ .++...+...+....+.
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 33333333444443333345555777888898899999999999999999999999998887 45555566555544444
Q ss_pred HhheeeecCCCC
Q 016055 370 VLFVAKLVPETK 381 (396)
Q Consensus 370 ~~~~~~~~~~~~ 381 (396)
..+..+..||++
T Consensus 176 ~~~~~~~~~~~~ 187 (394)
T PRK11652 176 TFSMARWMPETR 187 (394)
T ss_pred HHHHHHhCCccC
Confidence 444444456543
No 153
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.32 E-value=3.2e-11 Score=110.46 Aligned_cols=160 Identities=14% Similarity=0.077 Sum_probs=106.4
Q ss_pred hhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccc
Q 016055 212 GIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKA 288 (396)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (396)
......|.+.+ .|.+.. .......++..++.++.|+++||+|||+.+..+..+.+++.+....... ..
T Consensus 45 ~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 115 (438)
T TIGR00712 45 NFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPW--------AT 115 (438)
T ss_pred cHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccc--------cc
Confidence 34445565554 477665 5555666788899999999999999999888777777766665443200 01
Q ss_pred hhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH--hcccchhHHHHHHH
Q 016055 289 TPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK--WSSTGTFFAFSAIC 366 (396)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~ 366 (396)
.+...+....++.+.......+.....+.|.+|+++|++++++.+....++..++|.+.+...+ .++...+++.+.+.
T Consensus 116 ~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~ 195 (438)
T TIGR00712 116 SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICA 195 (438)
T ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 1222333333344444444455566788899999999999999999999999999888776544 34555666666665
Q ss_pred HhhHhheeeecCCC
Q 016055 367 SLTVLFVAKLVPET 380 (396)
Q Consensus 367 ~~~~~~~~~~~~~~ 380 (396)
.+..++..++.||+
T Consensus 196 ~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 196 IIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHHhccCC
Confidence 55554444455543
No 154
>PRK10504 putative transporter; Provisional
Probab=99.32 E-value=2e-11 Score=113.04 Aligned_cols=162 Identities=19% Similarity=0.129 Sum_probs=114.3
Q ss_pred HhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhh
Q 016055 206 QFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDL 282 (396)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (396)
..........+.|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+..+..++.+....
T Consensus 22 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~------- 94 (471)
T PRK10504 22 QSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL------- 94 (471)
T ss_pred HHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-------
Confidence 333345566678888888888776 3445556777888999999999999999988777666666655443
Q ss_pred hhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHH
Q 016055 283 QQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFA 361 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~ 361 (396)
.++...+.....+.+.+.....|....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+ .++...+.+
T Consensus 95 -----~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~ 169 (471)
T PRK10504 95 -----SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLI 169 (471)
T ss_pred -----hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHH
Confidence 22333344444555555555667777889999999999999999999999999999999999988 444555555
Q ss_pred HHHHHHhhHhheeeecCC
Q 016055 362 FSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~ 379 (396)
......+..+......++
T Consensus 170 ~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 170 NIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 544444444433333343
No 155
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=1.2e-11 Score=112.10 Aligned_cols=129 Identities=15% Similarity=0.215 Sum_probs=110.0
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
..+.+++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.......|..|+++|++
T Consensus 259 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (399)
T PRK05122 259 GVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGA 338 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHH
Confidence 34556677789999999999999999999888888888888888888899999999999888887778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCC
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPES 134 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~ 134 (396)
+.++.+....+|..+++.+.+.+ ||+..|++.+...++..+....++++
T Consensus 339 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 339 ALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999998888887776 89999999888777776665555543
No 156
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=4e-11 Score=108.81 Aligned_cols=159 Identities=20% Similarity=0.202 Sum_probs=109.4
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......+.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+.....++.......
T Consensus 30 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------- 98 (406)
T PRK15402 30 DMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA----------- 98 (406)
T ss_pred hhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 3333345566677787765 34455667888889999999999999999888877777766665542
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
++...+.....+.+.......+.......|.+|+++|.+..++......++..++|.+.+.+.+ .++...+++.+++.
T Consensus 99 -~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 99 -QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred -ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 2233333333444444434445667888899999999999999988888999999999998888 45555666656555
Q ss_pred HhhHhheeeecCCCC
Q 016055 367 SLTVLFVAKLVPETK 381 (396)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (396)
.+.........||++
T Consensus 178 ~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 178 ALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHhCCCCC
Confidence 555444444456554
No 157
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.30 E-value=2.7e-11 Score=108.22 Aligned_cols=151 Identities=9% Similarity=-0.020 Sum_probs=106.3
Q ss_pred hhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccc
Q 016055 212 GIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKA 288 (396)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (396)
......|.+..+.+.+.. .......+...++.++.|+++||+|||+.+..+..+..++........... .
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-------~ 89 (365)
T TIGR00900 17 ITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG-------G 89 (365)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC-------C
Confidence 334444555556666554 555566678888999999999999999998888777766666555431100 1
Q ss_pred hhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHH
Q 016055 289 TPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICS 367 (396)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~ 367 (396)
.+...+....++.+.......+...++..|.+|+++|++..+..+....+|..++|.+.+.+.+ .++...++..+....
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 169 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFA 169 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 1334444444555555556667778999999999999999999999999999999999999887 455555555444443
Q ss_pred hh
Q 016055 368 LT 369 (396)
Q Consensus 368 ~~ 369 (396)
+.
T Consensus 170 ~~ 171 (365)
T TIGR00900 170 IS 171 (365)
T ss_pred HH
Confidence 33
No 158
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=4.1e-11 Score=107.92 Aligned_cols=132 Identities=12% Similarity=0.086 Sum_probs=99.0
Q ss_pred HhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 215 FYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 215 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
...+....+.+.++. .......+...+..++.|+++||+|||+++..+..+.+++.+.+... . +.
T Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-----------~-~~ 91 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-----------I-HP 91 (393)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-----------H-HH
Confidence 333444566665554 44556667888889999999999999999999988887766654432 1 11
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHH
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFA 361 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 361 (396)
....++.+.......|...+++.|.+|+++|++++|+.+....++..+||.+.|.+.+......+.+
T Consensus 92 ---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i 158 (393)
T PRK11195 92 ---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAV 158 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233455666667778888999999999999999999999999999999999999998653333333
No 159
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.28 E-value=5.3e-11 Score=108.16 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=97.3
Q ss_pred hhhhHHhHHHHH-HHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhc-CCcceeeecchHHHHHHHHHHHHHHHHhhhh
Q 016055 210 VNGIAFYASSIF-ISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKS-GRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ 284 (396)
Q Consensus 210 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (396)
++....+++.++ ++.|++.. ...........++.+++|+++||+ |||+.+..+.++..++.+++... +
T Consensus 25 ~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----~--- 97 (493)
T PRK15462 25 FYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----E--- 97 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----h---
Confidence 444555555554 44577766 344445566777889999999999 99999988888888777655421 0
Q ss_pred cccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcC--cchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHH
Q 016055 285 WIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPIN--MKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFA 361 (396)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~ 361 (396)
........... ......+...+...+++.|.+|++ +|.++.++.+...++|+.++|.+.+.+.+ .+++..+..
T Consensus 98 ---~~~~~~~l~l~-li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~i 173 (493)
T PRK15462 98 ---IHPSFLYLSLA-IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGL 173 (493)
T ss_pred ---cchhHHHHHHH-HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHH
Confidence 11111121111 122223334455568899999986 69999999999999999999999999987 555555555
Q ss_pred HHH
Q 016055 362 FSA 364 (396)
Q Consensus 362 ~~~ 364 (396)
.++
T Consensus 174 aai 176 (493)
T PRK15462 174 AAV 176 (493)
T ss_pred HHH
Confidence 433
No 160
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=5.8e-11 Score=107.89 Aligned_cols=158 Identities=17% Similarity=0.174 Sum_probs=106.6
Q ss_pred hhhhHHhHHHHHHHcCCCch--------hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHh
Q 016055 210 VNGIAFYASSIFISAGFSGS--------IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQD 281 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (396)
......+.|.+.++.+.+.. .......+...++.++.|+++||+|||+.+..+....+++......
T Consensus 30 ~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------ 103 (408)
T PRK09874 30 FSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL------ 103 (408)
T ss_pred HHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH------
Confidence 33444566777777776632 3344555677888999999999999999988777776666655443
Q ss_pred hhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhH
Q 016055 282 LQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFF 360 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~ 360 (396)
.++...+....++.+... +..+....+..|..|+++|+++.++.+....+|..++|.+.+.+.+ .++...++
T Consensus 104 ------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 176 (408)
T PRK09874 104 ------AQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFF 176 (408)
T ss_pred ------HhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 222233333333333332 3455666788899999999999999999999999999999999887 45555566
Q ss_pred HHHHHHHhhHhheeeecCCC
Q 016055 361 AFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~ 380 (396)
+.+.+..+..+...+..+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 177 ITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 66655555444444444443
No 161
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=3.5e-11 Score=111.07 Aligned_cols=177 Identities=11% Similarity=0.014 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHH
Q 016055 195 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCL 271 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 271 (396)
.+...++.+...+..-.......|.+.++.+.+.. .......++..++.++.|+++||+|||+++..+.++.++...
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 109 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICML 109 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHH
Confidence 33444444443333344455556778888888766 445556678888999999999999999998888777777666
Q ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 272 LAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
......... .++...+....++.+.+.....|....++.|.+|+++|++++|+......+|.++++.+...+.
T Consensus 110 ~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 110 GFGASLGSG-------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHhcc-------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 655421110 2334444555555666666666777799999999999999999999999999999998887665
Q ss_pred Hh----cccchhHHHHHHHHhhHhheeeecC
Q 016055 352 KW----SSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 352 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
+. +....+...+.+.++.+++.+++.+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~ 213 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGS 213 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCC
Confidence 52 1233344444444444444443333
No 162
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=6e-11 Score=109.04 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=103.1
Q ss_pred hHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch
Q 016055 213 IAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT 289 (396)
Q Consensus 213 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
.....|++.++ +.+.. .......++..++.++.|+++||+|||+.+..+..+.+++.+...+... ...
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~--------~~~ 118 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW--------ATS 118 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc--------ccc
Confidence 45566776665 77665 4555666788899999999999999999988888877777766654310 011
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHH-HHHHhHHHHH-hcccchhHHHHHHHH
Q 016055 290 PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWI-ISFTFNFLMK-WSSTGTFFAFSAICS 367 (396)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~ 367 (396)
+...+.....+.+.+.....+.....+.|.+|+++|++++|+.+....+|..+ +|.+...+.. .++...+++.+.+..
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 23333333344444454555555577888999999999999999998888654 4543322322 344555666555555
Q ss_pred hhHhheeeecCCC
Q 016055 368 LTVLFVAKLVPET 380 (396)
Q Consensus 368 ~~~~~~~~~~~~~ 380 (396)
+..++..++.||+
T Consensus 199 ~~~~l~~~~~~~~ 211 (452)
T PRK11273 199 LVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHccCC
Confidence 5444444555543
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.27 E-value=9.3e-11 Score=104.92 Aligned_cols=131 Identities=20% Similarity=0.183 Sum_probs=95.4
Q ss_pred hhhhHHhHHH-HHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhc
Q 016055 210 VNGIAFYASS-IFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW 285 (396)
Q Consensus 210 ~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
......+.|. +.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--------- 87 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--------- 87 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH---------
Confidence 4455666664 6677788776 55556667889999999999999999999988888888877766653
Q ss_pred ccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 286 IKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..+...+....++.+... +..+....++.|.+|+++|+++.++.....++|..+++.+.+.+.+
T Consensus 88 --~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 88 --VQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred --hhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 203333333334444443 3334556889999999999999999998888888888887776654
No 164
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.27 E-value=2e-11 Score=110.77 Aligned_cols=126 Identities=13% Similarity=0.213 Sum_probs=103.3
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc----hhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK----AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
+.+.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+....++.|++|+++|++
T Consensus 265 i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~ 344 (418)
T TIGR00889 265 IFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRAS 344 (418)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 34456789999999999999999999988877666632 24567788999999999888888999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHhhhh----------hHHHHHHHhhHHHHHHHH-HHhccCCCh
Q 016055 86 FTTVHQ-LMICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQLI-GLCFIPESP 135 (396)
Q Consensus 86 ~~~~~~-~~~~lG~~~~~~l~~~l----------~wr~~f~~~~~~~~~~~~-~~~~~~e~p 135 (396)
+.++.+ ...++|.++||.+++.+ ||+..|.+.++..++..+ ..++++|+.
T Consensus 345 ~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 345 AQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999997 67889999999999876 289999888777666544 455567763
No 165
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.26 E-value=5.5e-11 Score=107.30 Aligned_cols=125 Identities=13% Similarity=0.116 Sum_probs=102.1
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
+.+++.++.|+++||+|||+.+..+.+...+........++.+.+++.|++.+++.+...+....+..|..|+ +|+++.
T Consensus 264 ~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~ 342 (393)
T PRK15011 264 LEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSAT 342 (393)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHH
Confidence 3455667899999999999988887776666555555677888888899998888777777777778898875 599999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCC
Q 016055 88 TVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE 133 (396)
Q Consensus 88 ~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e 133 (396)
++.+...++|..+++.+++.+ +|+..|.+.+++.++.++..++.||
T Consensus 343 ~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 343 TLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999888999999999998887 8999999888888887777777665
No 166
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.26 E-value=8.4e-11 Score=108.35 Aligned_cols=138 Identities=15% Similarity=0.110 Sum_probs=97.4
Q ss_pred HHhHHHHHHHcCCCchhH---HHHHHHHHHHHhhHHHHHHhh-cCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch
Q 016055 214 AFYASSIFISAGFSGSIG---MIAMVVIQIPMTLLGVLLMDK-SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT 289 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
.....++.++.|.+.... ............+++|+++|| +|||+++..+.++..++.+...+. ..
T Consensus 35 ~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~-----------~~ 103 (489)
T PRK10207 35 GILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS-----------LL 103 (489)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh-----------cc
Confidence 334444455677776533 333344555556789999999 999999999999999988877763 21
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCc--chhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHH
Q 016055 290 PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINM--KGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAF 362 (396)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~ 362 (396)
....+.......+.+.+...|...+++.|.+|+++ |+.++++.+...++|..++|.+.|++.+ .+++..|++.
T Consensus 104 ~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 104 KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 12223233344455556666777799999998874 5778999999999999999999999998 4544555443
No 167
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.25 E-value=8.4e-11 Score=108.28 Aligned_cols=145 Identities=15% Similarity=0.105 Sum_probs=104.4
Q ss_pred chhhhHHhHHHHHHH---cCCCch---hHHHHHHHHHHHHhhHHHHHHhh-cCCcceeeecchHHHHHHHHHHHHHHHHh
Q 016055 209 GVNGIAFYASSIFIS---AGFSGS---IGMIAMVVIQIPMTLLGVLLMDK-SGRRPLLLVSAAGTCLGCLLAALSFLFQD 281 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (396)
.++....+++.++++ .|.+.. .......+...++.+++|+++|| +|||+++..+..+.+++..++.+.
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~----- 99 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS----- 99 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----
Confidence 344455555655544 566654 55566667888999999999999 899999999998888888776652
Q ss_pred hhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCc---chhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccc
Q 016055 282 LQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINM---KGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTG 357 (396)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~ 357 (396)
.+...+.....+.+.+.+...|...++..|.+|+++ |+++.++.+...++|..++|.+.+.+.+ .++..
T Consensus 100 -------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~ 172 (475)
T TIGR00924 100 -------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHV 172 (475)
T ss_pred -------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHH
Confidence 222223333334455555556777788889998754 8889999999999999999999999988 45555
Q ss_pred hhHHHHHH
Q 016055 358 TFFAFSAI 365 (396)
Q Consensus 358 ~~~~~~~~ 365 (396)
.+...+..
T Consensus 173 ~f~~~~~~ 180 (475)
T TIGR00924 173 GFNLAAVG 180 (475)
T ss_pred HHHHHHHH
Confidence 55554433
No 168
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.25 E-value=2.2e-11 Score=111.00 Aligned_cols=127 Identities=14% Similarity=0.047 Sum_probs=105.3
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHH
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTT 88 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 88 (396)
..++.+++|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....++.|.+|++.|+...+
T Consensus 275 ~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 354 (420)
T PRK09528 275 EALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYL 354 (420)
T ss_pred HHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeee
Confidence 34667789999999999999999999999998888899999999999999999988888888889999999998888765
Q ss_pred H-HHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-HhccCCCh
Q 016055 89 V-HQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-LCFIPESP 135 (396)
Q Consensus 89 ~-~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-~~~~~e~p 135 (396)
. .+....+|.++++.+.+.+ |||..|.+.++..++..++ ....+++|
T Consensus 355 ~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 355 VGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5 5677889999999988887 8999999877776655443 33444433
No 169
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.24 E-value=4e-11 Score=107.75 Aligned_cols=154 Identities=20% Similarity=0.218 Sum_probs=111.2
Q ss_pred HhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 215 FYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 215 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
...|.+.++.+.++. .......++..++.++.|++.||+|||+.+..+..+.+++....... ++.
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~------------~~~ 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA------------QTI 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH------------ccH
Confidence 344566677777765 44556667888999999999999999999988888877777766542 223
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhH
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTV 370 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 370 (396)
..+....++.+.+.....+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+ .++...+...+.+..+..
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 3333444444555555556667899999999999999999999999999999999999888 455555665555555554
Q ss_pred hheeeecCCC
Q 016055 371 LFVAKLVPET 380 (396)
Q Consensus 371 ~~~~~~~~~~ 380 (396)
++..+..+|+
T Consensus 160 ~~~~~~~~~~ 169 (377)
T PRK11102 160 ALVFFFIPET 169 (377)
T ss_pred HHHHHhCCcc
Confidence 4444445554
No 170
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.24 E-value=7.7e-11 Score=106.70 Aligned_cols=132 Identities=11% Similarity=-0.030 Sum_probs=91.0
Q ss_pred hHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch
Q 016055 213 IAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT 289 (396)
Q Consensus 213 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
...+.+.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+..+.+++......... ...
T Consensus 32 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~--------~~~ 103 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL--------GHA 103 (402)
T ss_pred HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc--------cCc
Confidence 33455556677777765 5566777888999999999999999999998888877776554322100 011
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHH-HHHHHHhHHHHH
Q 016055 290 PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGS-WIISFTFNFLMK 352 (396)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~g~~~~ 352 (396)
++..+.....+.+.......+.......+.+|+++|++++|+.+....+|. .++|.+.+.+.+
T Consensus 104 ~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 233333333333333333334445677888999999999999999999986 578988888776
No 171
>PRK12382 putative transporter; Provisional
Probab=99.24 E-value=3.9e-11 Score=108.38 Aligned_cols=123 Identities=17% Similarity=0.185 Sum_probs=107.7
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
.+.+.+.++.|++.||+||||.+..+..+.+++.++..+.++.+.+.+.+++.|++.+...+...+.+.|.+|+++|+++
T Consensus 260 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (392)
T PRK12382 260 GAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTA 339 (392)
T ss_pred HHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHH
Confidence 44566778899999999999999999999999888888888888888899999999998888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHh
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLC 129 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~ 129 (396)
.++.+....+|..++|.+.+.+ ||+..|.+.+...++..+..+
T Consensus 340 ~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 340 LGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877 899999998887776655443
No 172
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.23 E-value=4.3e-11 Score=107.46 Aligned_cols=155 Identities=21% Similarity=0.174 Sum_probs=106.3
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
.+......|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+.+++.......
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~---------- 88 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA---------- 88 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH----------
Confidence 34456677888888888776 55666678889999999999999999999999888888887666653
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAI 365 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~ 365 (396)
++...+.....+.+.......+.......|.+| ++|+++.++......+|..+++.+.+.+.+ .++...+...+++
T Consensus 89 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 89 --DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred --HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 233333333334444443334444466677776 579999999999988998877777666665 4455566666655
Q ss_pred HHhhHhheeeec
Q 016055 366 CSLTVLFVAKLV 377 (396)
Q Consensus 366 ~~~~~~~~~~~~ 377 (396)
..+......++.
T Consensus 166 ~~~~~~~~~~~~ 177 (377)
T TIGR00890 166 FLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHhe
Confidence 555544443333
No 173
>PRK11043 putative transporter; Provisional
Probab=99.23 E-value=1.7e-10 Score=104.61 Aligned_cols=144 Identities=17% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHH
Q 016055 218 SSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLAL 294 (396)
Q Consensus 218 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
+.+.++.+.++. .......++..++.++.|+++||+|||+.+..+..+..++...... .++...+
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------------~~~~~~l 97 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW------------VESAAQL 97 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH------------hcCHHHH
Confidence 445667777766 4455566778889999999999999999988777777666655554 2222333
Q ss_pred HHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhe
Q 016055 295 VGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFV 373 (396)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (396)
....++.+.......+....+..|.+|+++++...+..+....++..++|.+.+.+.+ .+++..++..+.+..+..++.
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344455778899999989999999988899999999999999988 455555555555554444433
No 174
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.23 E-value=4.5e-10 Score=101.06 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=94.7
Q ss_pred HHHHHHHHhcchhhhHHhHHHHHH-HcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHH
Q 016055 199 VGLMVLQQFGGVNGIAFYASSIFI-SAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAA 274 (396)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 274 (396)
..+.+...+..........+.+.+ +.+++.. ....+..+...+.++..|++.||+|.|+++..+..+..+......
T Consensus 39 s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~ 118 (462)
T PRK15034 39 SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLG 118 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 333333333334444444455444 5777776 444555667778888899999999999998888888777766655
Q ss_pred HHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 275 LSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
+.... ..++...+....++.+.. .+..+.....+++.+|+++||++.|+....+++|..+++.+.+.+.
T Consensus 119 ~a~~~-------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 119 IAVQN-------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHcc-------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 42100 013344444444444443 3455666788999999999999999998778888877766665433
No 175
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.22 E-value=9.5e-11 Score=104.19 Aligned_cols=158 Identities=13% Similarity=0.020 Sum_probs=106.5
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++.+..|+++||+|||+++.........+. .....
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~----------- 75 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLD----------- 75 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHH-----------
Confidence 3445566777788888776 44555567888999999999999999886543332222221 11110
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
..+...+...-++.+..... .+.......|.+|+++|++++++.+....+|..+++.+.+.+.+ .++...+...+.+.
T Consensus 76 ~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~ 154 (368)
T TIGR00903 76 PFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVA 154 (368)
T ss_pred hccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 12344444444445544433 33444666899999999999999999999999999999999887 56666666667766
Q ss_pred HhhHhheeeecCCCC
Q 016055 367 SLTVLFVAKLVPETK 381 (396)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (396)
.+..++..+..||.+
T Consensus 155 ~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 155 AAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHcCCCC
Confidence 666666666667654
No 176
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.21 E-value=8.7e-11 Score=104.31 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=112.7
Q ss_pred chhhhhhHHHHHhhhhchhhh-HHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 7 SDLLSNVCFFIFWLPCALWKQ-TMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
.+.+++.++.|++.||+|||+ .+..+..+..++.+...+.++.+.+.+..++.|++.+...+...+++.|..|+++|++
T Consensus 222 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T cd06174 222 LGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGT 301 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHH
Confidence 455667788999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhc
Q 016055 86 FTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 130 (396)
Q Consensus 86 ~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~ 130 (396)
.+++.+...++|..+++.+.+.+ +|+..+.+.+++.++..+....
T Consensus 302 ~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 302 ASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999877 8999999988888777665544
No 177
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.21 E-value=1.1e-09 Score=101.79 Aligned_cols=244 Identities=17% Similarity=0.185 Sum_probs=156.2
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh--------------------c--------------------
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS--------------------K-------------------- 47 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~--------------------~-------------------- 47 (396)
|-.+...+..+...|.-|-+.+-.|+++.+++++++++- +
T Consensus 144 g~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 223 (735)
T KOG3626|consen 144 GNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSP 223 (735)
T ss_pred chhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCC
Confidence 344555668888889889899999999999999987652 0
Q ss_pred ----------h-hh-HHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh-------
Q 016055 48 ----------A-AW-WLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL------- 108 (396)
Q Consensus 48 ----------~-~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l------- 108 (396)
+ ++ .++++.++.|+|....++...+|+-|...+++-...+|+......+|+++|.+++++.
T Consensus 224 ~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~ 303 (735)
T KOG3626|consen 224 ENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDF 303 (735)
T ss_pred CcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeecc
Confidence 0 22 5677899999999999999999999999999999999999999999999999999876
Q ss_pred ----------------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHH
Q 016055 109 ----------------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISEEAAEIREYT 172 (396)
Q Consensus 109 ----------------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (396)
.|+.-|++.+.+.++..+..+++|+..+.. +++.+++ ..+..+.++...+.+. ..
T Consensus 304 ~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~---~~~~~~~-~~~~~k~~~~~~~~~~-----~~ 374 (735)
T KOG3626|consen 304 GLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS---QKRKRAR-DLHVLKTESGGAKSDK-----TF 374 (735)
T ss_pred ccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc---cccchhh-hhcccccccccccCCc-----ch
Confidence 377777777777777777777777654211 0000000 0000000000000000 00
Q ss_pred HHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCchhHHHHHH----HHHHHHhhHHH
Q 016055 173 ETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGSIGMIAMV----VIQIPMTLLGV 247 (396)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~g 247 (396)
.+.-++-....+.+++|+.+ +...+........+.....|+|.+++ +.+.+.+......+ .+..+|..++|
T Consensus 375 ~~~ikdfp~s~~~ll~N~if----~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG 450 (735)
T KOG3626|consen 375 GKKIKDFPKSIKRLLSNPIF----MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGG 450 (735)
T ss_pred hhhHHHHHHHHHHHhcCchH----HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccc
Confidence 00011122344555555544 34444444444456666677776665 46887775555544 35566778999
Q ss_pred HHHhhcCC--cceeeecch
Q 016055 248 LLMDKSGR--RPLLLVSAA 264 (396)
Q Consensus 248 ~l~d~~g~--~~~~~~~~~ 264 (396)
++.+|+.. |....+..+
T Consensus 451 ~iikkfkl~~r~~a~~~~~ 469 (735)
T KOG3626|consen 451 LIIKKFKLSARGAAKFVIV 469 (735)
T ss_pred eeeeeecccHHHHHHHHHH
Confidence 99998753 444333333
No 178
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.20 E-value=1.6e-10 Score=98.07 Aligned_cols=209 Identities=12% Similarity=-0.044 Sum_probs=128.4
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceee-eccc----CCCcc
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYI-AEIT----PKNLR 83 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i-~~~~----~~~~r 83 (396)
.++..++.|.++||+|||+.-+..+++.+++++ +-.+++++.++++|++.|++.......-.+++ .|+- |++..
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 344455699999999999999999999999986 45679999999999999999999988887765 4442 22222
Q ss_pred hhHHHHHH-HHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHH-HhccCCChhHHhhcCChHHHHHHHHHHh
Q 016055 84 GGFTTVHQ-LMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIG-LCFIPESPRWLAKTGKGIESEAALQRLR 155 (396)
Q Consensus 84 ~~~~~~~~-~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~ 155 (396)
+...+... ...++-.+.+..++..+ |-..+|....+..++..++ ....+|++. +.++..
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg------~~~~~~------- 227 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG------DTSSSS------- 227 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC------Cccccc-------
Confidence 33333222 22333344455555544 2367888877766666544 334566531 000000
Q ss_pred CCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHH-cCCCchhHHHH
Q 016055 156 GADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFIS-AGFSGSIGMIA 234 (396)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (396)
+. .+.-+..++.+.++ ++.+.............+.....|.|.+..+ .+.+-+..+.-
T Consensus 228 -------~~-----------~~~~~~a~~~i~~d---~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFss 286 (354)
T PF05631_consen 228 -------SL-----------SGSFREAWRAILSD---PRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSS 286 (354)
T ss_pred -------ch-----------HHHHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHH
Confidence 00 00011123334333 3344555666666666677777777776532 23344477777
Q ss_pred HHHHHHHHhhHHHHHHhh
Q 016055 235 MVVIQIPMTLLGVLLMDK 252 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~ 252 (396)
.....++|+.+..++..|
T Consensus 287 FM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 287 FMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 788888998888766554
No 179
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.19 E-value=2.9e-10 Score=102.27 Aligned_cols=133 Identities=10% Similarity=0.002 Sum_probs=101.1
Q ss_pred chhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhc
Q 016055 209 GVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW 285 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
.........|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++......
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~---------- 90 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL---------- 90 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 455666777888888887765 5556666788999999999999999999998888888877766654
Q ss_pred ccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 286 IKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.++...+....++.+.......+.......+..|+++|+++++..+....+|..++|.+.+.+.+.
T Consensus 91 --~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 91 --MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred --hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 223344444445555555455555556667888889999999999999999999999999988764
No 180
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.19 E-value=9.3e-11 Score=108.36 Aligned_cols=140 Identities=12% Similarity=0.001 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++..++.++.|++.||+|+|+.+..+.++..++.++..... ......++...++.+.......
T Consensus 80 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 80 LILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA----------GGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH----------HcCchHHHHHHHHHHHhcccch
Confidence 455666688999999999999999999998888777666665543321 1223345555566677777778
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh--cccchhHHHHHHHHhhHhheeeecCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW--SSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
|....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+. ++...+.+.++...+..++.+...++
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 88889999999999999999999999999999999999998874 66666776666655555544444443
No 181
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.18 E-value=1.3e-10 Score=88.47 Aligned_cols=133 Identities=22% Similarity=0.231 Sum_probs=94.7
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
..++..++.+..+++.||++||+.+..+.....++....... .+.........+.+.......+....
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS------------SNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 456788889999999999999998877776666665554431 22233333344444444455667778
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh-cccchhHHHHHHHHhhHhheeeecCC
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW-SSTGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
+..|.+|+++|++..++.+....++..++|.+.+.+.+. ++...+...+.+..+..+......||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999999884 44455555555555555544444443
No 182
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.17 E-value=5.7e-10 Score=103.67 Aligned_cols=151 Identities=17% Similarity=0.083 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++..++.++.|+++||+|||+++..+..+..++.+...............+......+...-++.+...++..
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 55666678899999999999999999999988888877766655432100000000011223444555566677777777
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH---------hcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK---------WSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
+...+++.|.+|+++|++++++.+....+|..+++.+.+.+.. .+++..+++.+...++. .+..+++||+
T Consensus 139 ~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~~s 217 (479)
T PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF-LMLLYFVPET 217 (479)
T ss_pred hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH-HHHHHcCCCC
Confidence 8888999999999999999999999999999888776654432 34445555544444443 3334556665
Q ss_pred C
Q 016055 381 K 381 (396)
Q Consensus 381 ~ 381 (396)
+
T Consensus 218 ~ 218 (479)
T PRK10077 218 P 218 (479)
T ss_pred c
Confidence 4
No 183
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=1.7e-10 Score=106.24 Aligned_cols=172 Identities=16% Similarity=0.101 Sum_probs=122.6
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeec
Q 016055 186 LFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVS 262 (396)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 262 (396)
.+|++.++.++....+..+...........+.. +..-++. .......+-.++.++++|.++||++||++++.+
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~----~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~ 81 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVT----QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILS 81 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Confidence 456788888888877777766554444443332 2222332 444444566677788999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHH
Q 016055 263 AAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWI 342 (396)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 342 (396)
-.+.++....+.+....+ ..+.+.++...++.+.......|...+.+.|++|+++...+.++.+...++...+
T Consensus 82 ~~~~~~~~~~L~~l~~~~-------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 82 QLLRALVALLLAVLAFFG-------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII 154 (524)
T ss_pred HHHHHHHHHHHHHHHHhC-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence 887776666555543221 2344555666666777777778888999999999999999999999999999999
Q ss_pred HHHHhHHHHH-hcccchhHHHHHHHHh
Q 016055 343 ISFTFNFLMK-WSSTGTFFAFSAICSL 368 (396)
Q Consensus 343 ~~~~~g~~~~-~~~~~~~~~~~~~~~~ 368 (396)
||.++|.+.. .+....+.+-+...++
T Consensus 155 GPalgG~Lva~~G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 155 GPALGGILVAFFGAAAAFLINALSFLI 181 (524)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 5555555554444333
No 184
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=3.8e-10 Score=103.64 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=101.2
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.....+.+.+.++.+.+.. .......+...++.++.|+++||+|||+.+..+..+..++.+...+.
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------- 104 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS----------- 104 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh-----------
Confidence 4456667788888888765 33344445667788899999999999998888877777766665442
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
.+.........++.+.......+....++.+.+| ++|+++.|+.+....+|..++|.+.+.+.+ .++...+++.+++.
T Consensus 105 ~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 105 SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 1112222222223333333333444567778776 689999999999999999999999998888 56666777766655
Q ss_pred HhhHh
Q 016055 367 SLTVL 371 (396)
Q Consensus 367 ~~~~~ 371 (396)
++..+
T Consensus 184 ~~~~v 188 (455)
T TIGR00892 184 LHCCV 188 (455)
T ss_pred HHHHH
Confidence 54433
No 185
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.16 E-value=3.3e-10 Score=104.98 Aligned_cols=143 Identities=14% Similarity=0.105 Sum_probs=93.1
Q ss_pred hhhhHHhHHHH-HHHcCCCchhHHHH---HHHHHHHHhhHHHHHHhh-cCCcceeeecchHHHHHHHHHHHHHHHHhhhh
Q 016055 210 VNGIAFYASSI-FISAGFSGSIGMIA---MVVIQIPMTLLGVLLMDK-SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ 284 (396)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (396)
++....+.+.+ .++.|.+....... .........+++|+++|| +|||+.+..+..+..++..++.+.
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~-------- 108 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS-------- 108 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--------
Confidence 34444455544 46678776532222 222333334689999999 599999998888888776666542
Q ss_pred cccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCc--chhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHH
Q 016055 285 WIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINM--KGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFA 361 (396)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~ 361 (396)
.+....+.....+.+.+.+...+...++..|.+|+++ |..+.++.+...++|..++|.+.|++.+ .++...+.+
T Consensus 109 ---~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i 185 (500)
T PRK09584 109 ---GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFAL 185 (500)
T ss_pred ---cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 1122222233333444444455666688999998654 4567888899999999999999999988 455555555
Q ss_pred HH
Q 016055 362 FS 363 (396)
Q Consensus 362 ~~ 363 (396)
.+
T Consensus 186 ~~ 187 (500)
T PRK09584 186 SV 187 (500)
T ss_pred HH
Confidence 44
No 186
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.15 E-value=2.7e-10 Score=102.30 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=102.1
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTV 89 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 89 (396)
+.+.++.|++.||+|||+++..+.++..+......+.++.+.+.+.+++.|++.+...+....++.|..|+ +++++.++
T Consensus 249 ~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 327 (375)
T TIGR00899 249 IPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTL 327 (375)
T ss_pred HHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHH
Confidence 34456789999999999999888877776666666678888888899999999988888888888998875 56799999
Q ss_pred HHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCC
Q 016055 90 HQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPE 133 (396)
Q Consensus 90 ~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e 133 (396)
.+...++|..++|.+++.+ +|+..|++.++..++..+...+++|
T Consensus 328 ~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 328 YTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 9999999999999998876 7999999988887777776666554
No 187
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.13 E-value=7.6e-10 Score=99.84 Aligned_cols=130 Identities=15% Similarity=0.059 Sum_probs=103.4
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++.+..|++.||+|||+++..+..+.+++.+...+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~------------ 93 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL------------ 93 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH------------
Confidence 4556677888888888776 5555556788889999999999999999999999999999988887
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.++...+....++.+.......+....++.|.+| ++|+.+++........|..+++.+.+.+.+.
T Consensus 94 a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 94 YPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred CcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445555566666666666666678888887 7799999999999999999999999888773
No 188
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.13 E-value=1.6e-09 Score=99.02 Aligned_cols=144 Identities=19% Similarity=0.082 Sum_probs=94.7
Q ss_pred HHHHhcchhhhHHhHHHHHHHcC---CCch---h---HHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHH
Q 016055 203 VLQQFGGVNGIAFYASSIFISAG---FSGS---I---GMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLA 273 (396)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 273 (396)
......-.....+..+.+.++.+ .+.. . ......++..++.++.|+++||+|||+.+..+..+..++.+..
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 33333334455566666666653 2222 1 2222334555889999999999999999999988888888776
Q ss_pred HHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 274 ALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
.+........ ......+...-++.+...++..+...+++.|.+|+++|+...++.......|..+++.+...+
T Consensus 111 ~~~~~~~~~~----~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 183 (432)
T PRK10406 111 ACLPGYETIG----TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL 183 (432)
T ss_pred hhcCCchhHH----HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6531000000 011234455556666666677788889999999999999999988877777777777665444
No 189
>PRK15075 citrate-proton symporter; Provisional
Probab=99.13 E-value=1e-09 Score=100.40 Aligned_cols=152 Identities=17% Similarity=0.047 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhH-HH---HH-----HHHHHHHhhHHHHHHhhcCCcceeeecchH
Q 016055 195 LIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIG-MI---AM-----VVIQIPMTLLGVLLMDKSGRRPLLLVSAAG 265 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~-----~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 265 (396)
......+..+....-........|.+.++.+.+.... .. .. .+...++.++.|++.||+|||+.+..+..+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 3444455555555556677888888888887655411 11 11 122246788999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHH
Q 016055 266 TCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISF 345 (396)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 345 (396)
..++..+..+........ ......+...-++.+.......+....++.|.+|+++|++++++.+...++|..+++.
T Consensus 96 ~~~~~~l~~~~~~~~~~~----~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 96 MASGTLLIAFVPGYATIG----LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHhCCcHHHHH----HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 888877776531000000 0001122333444555554555666689999999999999999999988888888887
Q ss_pred HhHHH
Q 016055 346 TFNFL 350 (396)
Q Consensus 346 ~~g~~ 350 (396)
+.+.+
T Consensus 172 ~g~~l 176 (434)
T PRK15075 172 LGYLL 176 (434)
T ss_pred HHHHH
Confidence 77665
No 190
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.12 E-value=1.8e-10 Score=106.99 Aligned_cols=141 Identities=20% Similarity=0.108 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++..++.++.|+++||+|||+.+..+..+..++..+...... ..+...++...++.+.+.....
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~~~~~~ 145 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF---------ALSVEMLIVGRVLLGIGVGIAS 145 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc---------ccchHHHHHHHHHHHhhhhHHH
Confidence 5666677889999999999999999999998888877777666644210 1222244444455555555666
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh---HHHHH-hcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF---NFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
+....++.|.+|+++|+++.++.+....+|..+++.+. +...+ .++...+.+ ..+..+..++..++.+|+
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~-~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL-QLIPAGLLFLGLFFLPES 219 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH-HHHHHHHHHHHHhcCCCC
Confidence 77779999999999999999999999999999999988 44333 344444554 333333333444455554
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.12 E-value=6.5e-10 Score=114.08 Aligned_cols=187 Identities=14% Similarity=0.060 Sum_probs=114.7
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHc-CCCch----hHHHHHHHHHHHHhhHHHHHHhhcCCccee
Q 016055 185 ELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISA-GFSGS----IGMIAMVVIQIPMTLLGVLLMDKSGRRPLL 259 (396)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 259 (396)
++++++.+++++...++..+........+..+..+..... +.+.. .......+..++.+++.|+++||++||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 3556666666666555555543322222333333222222 22211 334445567788899999999999999875
Q ss_pred eecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHH
Q 016055 260 LVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLG 339 (396)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 339 (396)
........+.......... ..+...++...++.+.......|...+++.+.+|+++++.++|+.+....+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~---------~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFH---------LNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 3322222221111111110 2234555666666777777788889999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 340 SWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
..+||.+.|.+.+..++..+++..++..+..++..+.++++
T Consensus 157 ~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 157 ILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999999885444444444444444444444445443
No 192
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.10 E-value=1.6e-09 Score=98.04 Aligned_cols=132 Identities=11% Similarity=-0.061 Sum_probs=100.4
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++++..|++.||+|||+.+..+..+.+++..+......
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~--------- 90 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE--------- 90 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 4445666777778888765 5666667889999999999999999999999999888888766543211
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
.+++..+....++.+.......+....+..+..|+++|++..++.+....+|..++|.+.+.+.
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234444444455555555555666688888899999999999999999999999999988775
No 193
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.09 E-value=1.4e-09 Score=103.27 Aligned_cols=156 Identities=10% Similarity=-0.008 Sum_probs=113.3
Q ss_pred HHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHH
Q 016055 197 VGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLA 273 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 273 (396)
+...+..+...........-.+.+.++.+++.. .......++..++.++.+++.||.+||+.+.++.++.+++.++.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 333334444333334455555666667777655 55666778889999999999999999999999999999999888
Q ss_pred HHHHHHHh-hhh----------------c--------------------cc--chhhHHHHHHHHHHHHhhccccchhhh
Q 016055 274 ALSFLFQD-LQQ----------------W--------------------IK--ATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 274 ~~~~~~~~-~~~----------------~--------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
++.....+ +.. . .. ...+..++..-++.+.+.....+...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 76532110 000 0 00 012344555667777777777788889
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
++.|.+|+++|+...|+.+....+|..+++.+.+.+.+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998876
No 194
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.09 E-value=1.5e-09 Score=101.24 Aligned_cols=116 Identities=15% Similarity=0.000 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++.+++.++.|+++||+|||+.+..+.++..++..+...... . .+..+...+....++.+...++..
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~---~---~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG---S---SPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC---c---ccchHHHHHHHHHHHHHHHHhhhh
Confidence 4566667889999999999999999999998887777777665554210 0 001113445555566666676777
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
+....+..|.+|++.|+++.++.+....+|..+++.+...+.
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999988876553
No 195
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.7e-10 Score=97.54 Aligned_cols=110 Identities=27% Similarity=0.276 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.....+++..++.++..|.++||+|||.++.++.+..++...+.+. ..+...++..-+..+.+. +..
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~------------S~~F~afv~aR~l~Gi~k-gnl 138 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL------------SRNFAAFVLARFLGGIFK-GNL 138 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhhhhcc-Cch
Confidence 6677778999999999999999999999999888888887776665 445544455455556555 444
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+..++++|++++++|+.+++.++....+|.++||.++|++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 5666999999999999999999999999999999999999987
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=1.4e-09 Score=111.92 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+..++++++.|+++||+|||+++..+..+..+..++..+... ..+...++...++.+.......
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY---------LGWFWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH---------HccHHHHHHHHHHHHHHHHhhc
Confidence 3444556778888999999999999999888777665555544443211 2234445555556666666777
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
+...+++.|.+|+++|++++|+......+|..++|.+.+.+.+.
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999999999999999999999999999999999998774
No 197
>PRK09952 shikimate transporter; Provisional
Probab=99.06 E-value=5e-09 Score=95.89 Aligned_cols=111 Identities=17% Similarity=0.060 Sum_probs=80.2
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhh
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIM 316 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (396)
++..++.++.|+++||+|||+.+..+..+.+++.++..+........ ......+...-.+.+....+..+....++
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 150 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIG----WWAPVLLVTLRAIQGFAVGGEWGGAALLA 150 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHH----HHHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 44567788899999999999999998888888877776631100000 00011344445566666666777777999
Q ss_pred cccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 317 SEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 317 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
.|.+|+++|+...+..+....+|..+++.+...+.
T Consensus 151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888888877766554
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=99.06 E-value=1.1e-09 Score=102.32 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=103.8
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchh--hHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAA--WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
+.+.++.+++.||+|||+.+..+.++.+++.++..+.++. +...+.-++.+++.+...+....+..|.+|++.|+.++
T Consensus 369 i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 448 (505)
T TIGR00898 369 LPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGV 448 (505)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhH
Confidence 4456678999999999999999999999988888776654 44555666777777777888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhh--hHHHHHHHhhHHHHHHHHHHhccCCCh
Q 016055 88 TVHQLMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPESP 135 (396)
Q Consensus 88 ~~~~~~~~lG~~~~~~l~~~l--~wr~~f~~~~~~~~~~~~~~~~~~e~p 135 (396)
++.+....+|.+++|.+.+.. ++..++.+.+...++..+..+++||+.
T Consensus 449 g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 449 GVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999998833 567778887777777777777888865
No 199
>PTZ00207 hypothetical protein; Provisional
Probab=99.04 E-value=4.2e-09 Score=97.64 Aligned_cols=162 Identities=17% Similarity=0.139 Sum_probs=104.6
Q ss_pred hhhhHHhHHHHHHHcCCCchhHHHHHHHHHH--HHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 210 VNGIAFYASSIFISAGFSGSIGMIAMVVIQI--PMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.+....+.+.+.++.+.+......+..++.. ...++.|++.||+|+|+++.++.++..++.++..+.....-
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i------ 116 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI------ 116 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc------
Confidence 4456677788888888887744443333222 34457899999999999999999999999887776311000
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHH
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICS 367 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 367 (396)
..+...+....++.+.......+.....+.+.+| ++||++.|+......+|+++.+.+...+...+....+++.+.+..
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~ 195 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFAL 195 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 1233334444444444444444455567778887 678999999999999999865555544444334455666666666
Q ss_pred hhHhheeeecC
Q 016055 368 LTVLFVAKLVP 378 (396)
Q Consensus 368 ~~~~~~~~~~~ 378 (396)
+.+++...+++
T Consensus 196 vv~ll~~~~vr 206 (591)
T PTZ00207 196 VVGILAIVFMR 206 (591)
T ss_pred HHHHHHHhhee
Confidence 65555544443
No 200
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.04 E-value=1.3e-09 Score=100.29 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=99.2
Q ss_pred HHhHHHHHHHcCCCch--hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 214 AFYASSIFISAGFSGS--IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
..-++++..+.|-++. +......+...++.++.|+++|.+|||..++.+.++..++.++.+. .++.
T Consensus 64 a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at------------A~~~ 131 (599)
T PF06609_consen 64 ASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT------------AQNM 131 (599)
T ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc------------CCcH
Confidence 3445677777776655 6666677888899999999999999999999999999999988875 3444
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhH
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTV 370 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 370 (396)
..++....+.+.. .+........++|..|.+.|..+.++.....-.....+|.+...+.. .++.+.+++..+...+..
T Consensus 132 ~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 132 NTFIAGMVLYGVG-AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 4444444444443 33344455678999999999888776665544555566666655544 455666666555444443
No 201
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.03 E-value=1.7e-09 Score=93.26 Aligned_cols=166 Identities=13% Similarity=0.058 Sum_probs=115.8
Q ss_pred HHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHH
Q 016055 203 VLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLF 279 (396)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
+...+...+......+.+.++.++++. ....+..+.+.+.++..|.+.||+|.|+....+.++..+-++...+...
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~- 101 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT- 101 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc-
Confidence 333333344555555666677888887 5555566778888999999999999999999998888888887777532
Q ss_pred HhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc---c
Q 016055 280 QDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS---S 355 (396)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~---~ 355 (396)
..+...++...++.+ ..++.......++++.+|++++|.++|+.. .+|+|..+...+.+.+.. .+ +
T Consensus 102 --------~~~~~~ll~~gll~G-~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w 171 (417)
T COG2223 102 --------YPSTWQLLVIGLLLG-LAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW 171 (417)
T ss_pred --------CCchHHHHHHHHHHh-cccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH
Confidence 111122233333333 344555666789999999999999999999 999999999988888877 33 4
Q ss_pred cchhHHHHHHHHhhHhheeeecCC
Q 016055 356 TGTFFAFSAICSLTVLFVAKLVPE 379 (396)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~ 379 (396)
+....+......+..+..++..++
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555566666666656665555544
No 202
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.02 E-value=7.1e-09 Score=92.06 Aligned_cols=157 Identities=15% Similarity=0.105 Sum_probs=116.7
Q ss_pred hhhhHHhHHHHHHHcCCCch----hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhc
Q 016055 210 VNGIAFYASSIFISAGFSGS----IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW 285 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
-...++..|++.++.|++.. ........+..+..+..|+++||+|.|+++..+.+...+...+..+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f---------- 111 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL---------- 111 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH----------
Confidence 45667777888888888766 4455566788899999999999999999999888888888888776
Q ss_pred ccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccch--hHHHH
Q 016055 286 IKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGT--FFAFS 363 (396)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~--~~~~~ 363 (396)
.++...+...-++.|.+.+... ....++.+.+|+++|+++.|+.+....+|.++++++.+.+...++... ...+.
T Consensus 112 --a~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Is 188 (511)
T TIGR00806 112 --GTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIIS 188 (511)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 3345566666666777776666 777999999999999999999999999999999999998555332221 22233
Q ss_pred HHHHhhHhheeeecCC
Q 016055 364 AICSLTVLFVAKLVPE 379 (396)
Q Consensus 364 ~~~~~~~~~~~~~~~~ 379 (396)
......+++..+++|.
T Consensus 189 l~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 189 LVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 3333334444455553
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=7.4e-09 Score=94.55 Aligned_cols=133 Identities=11% Similarity=-0.063 Sum_probs=99.5
Q ss_pred hhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc
Q 016055 210 VNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
......+.|.+.++.+.++. .......++..++.+..|++.||+|||+++..+..+..++.++......
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-------- 113 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-------- 113 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 45666778888888888776 5566677889999999999999999999999999888888866532110
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
.++...+....++.+.......+..+.++.|..|+++|...+++.+....+|..++|.+.+.+.
T Consensus 114 -a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 114 -IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555555556666677788777776667899999999999999999877654
No 204
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.00 E-value=7.1e-07 Score=79.76 Aligned_cols=327 Identities=15% Similarity=0.012 Sum_probs=158.8
Q ss_pred hhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh------h--c----hhhH---HHHHHHHHHhhhhhc-ccccce
Q 016055 9 LLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF------S--K----AAWW---LDLGRLLVGYGMGLL-SYVVPV 72 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~------~--~----~~~~---l~~~r~l~G~~~~~~-~~~~~~ 72 (396)
.++..+..|.+.||..|++++..+.+..-++..+.+. . + +-+. +++.-.+.|.-.-.. .....+
T Consensus 51 ~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~ia 130 (432)
T PF06963_consen 51 AILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIA 130 (432)
T ss_pred HHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 3445566899999999999988887665443333221 1 1 1122 222222222211111 112223
Q ss_pred eeeccc------CCCcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH-----HhccCCChhH
Q 016055 73 YIAEIT------PKNLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG-----LCFIPESPRW 137 (396)
Q Consensus 73 ~i~~~~------~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~-----~~~~~e~p~~ 137 (396)
.=.||. +++.+.+..+..--.--+..+++|++.+.+ +.+....+.+...++..+. .......|+
T Consensus 131 vERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~- 209 (432)
T PF06963_consen 131 VERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA- 209 (432)
T ss_pred eccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-
Confidence 334553 233445555655555566777888877776 5555555544444443321 111233342
Q ss_pred HhhcCChHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhH
Q 016055 138 LAKTGKGIESEAALQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYA 217 (396)
Q Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
+..+++.++.+...+.. +..+...+. ...+..+..-+....+|+..++.+.+...+...+++.. ..+ .....
T Consensus 210 L~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLs----f~~lm 281 (432)
T PF06963_consen 210 LAVKKRSSESESSSDEE--SSSESSSDP-SILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLS----FGGLM 281 (432)
T ss_pred hcCCCCCcccccccccc--ccccccchh-hHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-Hhc----CcHHH
Confidence 22222211111100000 000000000 00011111111223456666665555444443333333 221 12233
Q ss_pred HHHHHHcCCCchhHH---HHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHH
Q 016055 218 SSIFISAGFSGSIGM---IAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLAL 294 (396)
Q Consensus 218 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
..+....|+++.... ....+.++.++.+..++.+|+|..+.=..+.........+..........+. +......+
T Consensus 282 t~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~--~~~s~~~l 359 (432)
T PF06963_consen 282 TAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF--SSISAYLL 359 (432)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--hhhHHHHH
Confidence 444556688887443 4445678888999999999999877666665554444333333222111100 01112222
Q ss_pred HHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 016055 295 VGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFT 346 (396)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 346 (396)
+......=.+.-++--...-+..|..|+++||+..|+-+..+++...+.-.+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222333334445788899999999999999999998877655444
No 205
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.00 E-value=7.5e-09 Score=93.63 Aligned_cols=160 Identities=15% Similarity=0.089 Sum_probs=93.8
Q ss_pred HHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 214 AFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
++..+++.++.+.++. .......+...++.++.|+++||+|||+.+..+.....+.............. ....
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 98 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLL----QSNI 98 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHH----HHHH
Confidence 3333344455677775 56666778889999999999999999998876655554433322111100000 0011
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhH
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTV 370 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (396)
........+..+.......+....+..|..+ +++...|.......+|..++|.+.+.+.+.++...++..+.+..+..
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~ 176 (396)
T TIGR00882 99 LVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILM 176 (396)
T ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHH
Confidence 1112222233333333444555556555433 33556778888889999999999998887777777766666555554
Q ss_pred hheeeecCC
Q 016055 371 LFVAKLVPE 379 (396)
Q Consensus 371 ~~~~~~~~~ 379 (396)
++.....++
T Consensus 177 ~~~~~~~~~ 185 (396)
T TIGR00882 177 LLLMFAKPK 185 (396)
T ss_pred HHHHHhCCC
Confidence 443333333
No 206
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.98 E-value=7.4e-10 Score=94.34 Aligned_cols=141 Identities=15% Similarity=0.126 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+.+++.+++.|.+.||+|+|..+.+|..++..+.+++++ ......++..-.+.+.......
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf------------g~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF------------GNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH------------cchhHHHHHHHHHhhhhHHHHH
Confidence 6666677899999999999999999999999999999999999988 5566677777777787777777
Q ss_pred chhhhhhcccCCcCc-chhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCC
Q 016055 310 GIPWVIMSEVFPINM-KGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (396)
....++.++.+|+++ |++++|+.-.+..+|..++|.++|.+.| .|...+|.+.+.++++-..+..+.++.++.
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 777899999999865 7999999999999999999999999999 777888888888888877776666654443
No 207
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.97 E-value=5.1e-09 Score=94.14 Aligned_cols=119 Identities=14% Similarity=0.074 Sum_probs=100.6
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
+-+...++.+++.||+|+|+.+.++.+...+.....++++|.+.+++.+++.|++.+...+....++.+. |+++|++..
T Consensus 252 ~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q 330 (382)
T TIGR00902 252 AEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQ 330 (382)
T ss_pred HHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHH
Confidence 3344556789999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred HHHH-HHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHH
Q 016055 88 TVHQ-LMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 128 (396)
Q Consensus 88 ~~~~-~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~ 128 (396)
++++ ...++|..+++.+++.+ ++ ..|++.+.++++..++.
T Consensus 331 ~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 331 ALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 9986 56789999999999888 54 45666666665554443
No 208
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.96 E-value=2e-08 Score=91.11 Aligned_cols=183 Identities=15% Similarity=0.100 Sum_probs=108.6
Q ss_pred HHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHh----hcCCcceeeec-chHHHH
Q 016055 197 VGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMD----KSGRRPLLLVS-AAGTCL 268 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~~~~~ 268 (396)
.........+++ +.....+.+.+.++.|.+.. .......+..++..++.|+++| |+|||+.++.. .....+
T Consensus 8 ~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 8 RVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH
Confidence 333333333433 44455556667788888776 4444555788888999999999 59999988764 444444
Q ss_pred HHHHHHHHHHHHhhh--hcccch-h---hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcc--hhhhHHHHHHHHHHH
Q 016055 269 GCLLAALSFLFQDLQ--QWIKAT-P---FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMK--GSAGSLVTLVSWLGS 340 (396)
Q Consensus 269 ~~~~~~~~~~~~~~~--~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~ 340 (396)
+..++.......... ...... . ...+....+. -.......+...+++.|..|+++| +.+.++.+....+|+
T Consensus 87 ~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll-d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 87 AVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL-DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 444443321110000 000000 1 1112222222 223333444556999999998865 578999999999999
Q ss_pred HHHHHHhHHHH--Hh--------------cccchhHHHHHHHHhhHhheeeecCCCC
Q 016055 341 WIISFTFNFLM--KW--------------SSTGTFFAFSAICSLTVLFVAKLVPETK 381 (396)
Q Consensus 341 ~~~~~~~g~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (396)
.+++.+.+... +. +....|.+.+++..+..++..+..+|.+
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999888652 11 2233456666666666777777777754
No 209
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.96 E-value=1.1e-08 Score=94.90 Aligned_cols=161 Identities=16% Similarity=0.097 Sum_probs=106.8
Q ss_pred hhhhHHhHHHHHHHcCCCchhHHHHHHHHH-HHHhhHHHHHHhhc-----CCcce-eeecchHHHHHHHHHHHHHHHHhh
Q 016055 210 VNGIAFYASSIFISAGFSGSIGMIAMVVIQ-IPMTLLGVLLMDKS-----GRRPL-LLVSAAGTCLGCLLAALSFLFQDL 282 (396)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~l~d~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 282 (396)
........|.+.++.|.+.........+.. .++.++.++++||+ |||+. +..+.+..+++...+.+..
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~----- 102 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE----- 102 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC-----
Confidence 445555667778888888764444433222 26789999999999 98885 4455555555555544421
Q ss_pred hhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-h-cccchhH
Q 016055 283 QQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-W-SSTGTFF 360 (396)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~-~~~~~~~ 360 (396)
+..+...+....++.+.+.....+...++..|.+|+++|+++.++......+|..+++.+.+.+.+ . ++...++
T Consensus 103 ----~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~ 178 (491)
T PRK11010 103 ----PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYW 178 (491)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHH
Confidence 012233334334444555555666777999999999999999999999999999999999998888 3 5666666
Q ss_pred HHHHHHHhhHhheeeecCCC
Q 016055 361 AFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~ 380 (396)
+.+.+..+..+.. +..||+
T Consensus 179 i~a~l~ll~~l~~-~~~~e~ 197 (491)
T PRK11010 179 LMAALLIPCIIAT-LLAPEP 197 (491)
T ss_pred HHHHHHHHHHHHH-HhcCCC
Confidence 6665554443332 235554
No 210
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.94 E-value=1e-08 Score=91.36 Aligned_cols=159 Identities=14% Similarity=-0.033 Sum_probs=99.5
Q ss_pred hhHHhHHHHHHHcCCCchhHHHHH--HHHHHHHhhHHHHHHhhc-----CCccee-eecchHHHHHHHHHHHHHHHHhhh
Q 016055 212 GIAFYASSIFISAGFSGSIGMIAM--VVIQIPMTLLGVLLMDKS-----GRRPLL-LVSAAGTCLGCLLAALSFLFQDLQ 283 (396)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 283 (396)
....-.|.+.++.|.+........ .+...+ .++.|+++||+ ||||.+ ..+.+..++....+.+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~------ 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV------ 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC------
Confidence 344556777888888887444443 222332 78999999997 788864 445555544444443310
Q ss_pred hcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hc--------
Q 016055 284 QWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WS-------- 354 (396)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~-------- 354 (396)
+......+....+..+.......+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+ .+
T Consensus 79 ---~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~ 155 (356)
T TIGR00901 79 ---PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITL 155 (356)
T ss_pred ---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 012222233333333444444556677899999999999999999999999999999999988876 33
Q ss_pred ccchhHHHHHHHHhhHhheeeecCCC
Q 016055 355 STGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
+...+++.++...+...+..+..||+
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 44445555554444333333334554
No 211
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.92 E-value=7.6e-09 Score=92.14 Aligned_cols=129 Identities=15% Similarity=0.037 Sum_probs=91.1
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK 287 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (396)
.......|.+.++.+.+.. .......++..++.++.|++.||+|||+.+..+.....++.... .
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~------------ 83 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S------------ 83 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H------------
Confidence 3445567788888888876 55566678899999999999999999999887776655554433 1
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
.++...+....++.+.......+.....+.|.+| ++|+++.++.+....+|..+++.+.+.+.+.
T Consensus 84 ~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 84 APGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred hccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1222233333333344333334444566777776 5899999999999999999999998888773
No 212
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=1e-08 Score=86.59 Aligned_cols=124 Identities=17% Similarity=0.077 Sum_probs=97.6
Q ss_pred hhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHH
Q 016055 12 NVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQ 91 (396)
Q Consensus 12 ~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 91 (396)
|.++.+++.||+|||+.+.++.+++++..++...+.+-....+.-|..-+...+.+.+.+.|..|.+|.+-|+...|.-.
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcS 476 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCS 476 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhh
Confidence 45678999999999999999999999999888776654444444444444455667889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh--hHHHHHHHhhHHHHHHHHHHhccCCCh
Q 016055 92 LMICIGVSMTYLIGAFL--NWRILALIGTIPCLVQLIGLCFIPESP 135 (396)
Q Consensus 92 ~~~~lG~~~~~~l~~~l--~wr~~f~~~~~~~~~~~~~~~~~~e~p 135 (396)
...-+|.++.|.++-.. +-..+..+.+..++++.+...++|-.+
T Consensus 477 smaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 477 SMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999433 344555666777777777778887544
No 213
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.86 E-value=3.5e-08 Score=89.43 Aligned_cols=165 Identities=16% Similarity=0.096 Sum_probs=109.3
Q ss_pred HhcchhhhHHhHHHHHHHcCCCchhHHHHHHH-HHHHHhhHHHHHHhhc-----CCcc-eeeecchHHHHHHHHHHHHHH
Q 016055 206 QFGGVNGIAFYASSIFISAGFSGSIGMIAMVV-IQIPMTLLGVLLMDKS-----GRRP-LLLVSAAGTCLGCLLAALSFL 278 (396)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~ 278 (396)
+.........-.|.++++.|.+.........+ .-.+..++.|+++||+ |||| .+..+....+++...+.+..
T Consensus 11 ~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~- 89 (402)
T PRK11902 11 SGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP- 89 (402)
T ss_pred HhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC-
Confidence 33345566677788888999988744433222 1257788999999999 7765 56666666665555554420
Q ss_pred HHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh--ccc
Q 016055 279 FQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW--SST 356 (396)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~--~~~ 356 (396)
+..+...+....++.+.+.....+...+++.|..|+++|+++.++......+|..+++.+.+.+.+. ++.
T Consensus 90 --------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 90 --------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred --------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 0122333333333344555556677789999999999999999999999999999999999888873 555
Q ss_pred chhHHHHHHHHhhHhheeeecCCC
Q 016055 357 GTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
..+++.+++..+..+. .+..+|+
T Consensus 162 ~~f~i~a~~~l~~~l~-~~~~~e~ 184 (402)
T PRK11902 162 NTYLLMAGLMLAGALT-TLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCCC
Confidence 5666656555443332 3344544
No 214
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.86 E-value=3.5e-08 Score=89.13 Aligned_cols=110 Identities=18% Similarity=0.138 Sum_probs=78.0
Q ss_pred HHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhc
Q 016055 238 IQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMS 317 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
...++.++.|+++||+|||+.+..+..+..++..+........+.. ......+....++.+.......+....++.
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 122 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIG----IWAPILLLLARLIQGFSLGGEWGGAALYLA 122 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhH----HHHHHHHHHHHHHHHhhccccccccHHHhh
Confidence 3456789999999999999999988888887777666531100000 000112333344455555555666778999
Q ss_pred ccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 318 EVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 318 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
|.+|+++|+...+..+....+|..+++.+.+.+.
T Consensus 123 ~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 123 EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred hcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876654
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.84 E-value=1.2e-08 Score=93.63 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=86.4
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-chhhHHHHHHHHHHhhhhhcccccceeeecccC-----
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP----- 79 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~----- 79 (396)
..+.+++.+++++++||+|+|+++..+.++.+++.+...+. ++.+.+.+..++.|++.+...+...++++|..+
T Consensus 267 ~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 346 (437)
T TIGR00792 267 IVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWK 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence 34556677889999999999999999999888887777665 456777788889999999999988899888865
Q ss_pred --CCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 80 --KNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 80 --~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
++++|...++.+....+|..+++.+.+.+
T Consensus 347 ~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 347 TGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999888776
No 216
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.81 E-value=4.7e-08 Score=89.25 Aligned_cols=126 Identities=19% Similarity=0.131 Sum_probs=108.3
Q ss_pred hhhhhHHHHHhhhhchhh--hHHhhHHHHHHHHHHHHHh--------hchhhHHHHHHHHHHhhhhhcccccceeeeccc
Q 016055 9 LLSNVCFFIFWLPCALWK--QTMGFSDIVCIIGWVIIVF--------SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEIT 78 (396)
Q Consensus 9 ~~~~~~~~G~l~dr~Grk--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 78 (396)
-+.++.++|++.||+|.| ++++.+++++.+..+...+ .++.+.+.+.-++.|+..|...+..-++.+|..
T Consensus 330 a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li 409 (477)
T PF11700_consen 330 AIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI 409 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC
Confidence 345666799999999999 9999999888776666655 678888999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCC
Q 016055 79 PKNLRGGFTTVHQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPES 134 (396)
Q Consensus 79 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~ 134 (396)
|+++.+..+|++....-....+||++.+.+ +-|+.+....++.++.+++.+.++++
T Consensus 410 P~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 410 PPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 999999999999999999999999998888 57888887777777777777666653
No 217
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.81 E-value=1.3e-06 Score=82.82 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=93.2
Q ss_pred hhhHHHHHhhhhc-hhhhHHhhHHHHHHHHHHHHHhhch--------hhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 11 SNVCFFIFWLPCA-LWKQTMGFSDIVCIIGWVIIVFSKA--------AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 11 ~~~~~~G~l~dr~-Grk~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
+...++|.++|++ ||++.+.++.++..++..+.+++.. ....+++-.+..+|.|+.-|...+...|-++++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 3445689999965 9999999999999999988877421 223566778888899999999999999998764
Q ss_pred c---chhHHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHhhHHHHHHHHHH
Q 016055 82 L---RGGFTTVHQLMICIGVSMTYLIGAFL-----------NWRILALIGTIPCLVQLIGL 128 (396)
Q Consensus 82 ~---r~~~~~~~~~~~~lG~~~~~~l~~~l-----------~wr~~f~~~~~~~~~~~~~~ 128 (396)
+ |-....++..+.++|.++++.+..++ +|...|.+.++..+++++..
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 3 56778888889999999998887766 38888888877776665543
No 218
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.80 E-value=2.5e-08 Score=93.55 Aligned_cols=136 Identities=21% Similarity=0.262 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
....+..++..+|+++.|.++||+|||+++..+..+..++.+..++ ..+.......-++.+.+..+..
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~------------a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF------------APNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH------------hCcHHHHHHHHHHHHhhccchh
Confidence 5667777899999999999999999999999999999888877776 6677778888888888888888
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
...+.+..|.++++.|+.+..+ ......++.++|...+++.. ++....+.......+..++ +++.+|.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 8999999999999999999999 88888888889888888877 4444444444444433333 4444454
No 219
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.78 E-value=1.5e-07 Score=84.71 Aligned_cols=144 Identities=14% Similarity=-0.013 Sum_probs=87.9
Q ss_pred hhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecc-hHHHHHHHHHHHHHHHHhhhhcc
Q 016055 211 NGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSA-AGTCLGCLLAALSFLFQDLQQWI 286 (396)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 286 (396)
.....++|.+.++.+.+.. .......+...++.++.|++.||++|++...-.. ....+....... .
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~------ 90 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWF----G------ 90 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH----h------
Confidence 4445556667777888776 4455555677888999999999999842111011 111111111111 0
Q ss_pred cchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHH
Q 016055 287 KATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAI 365 (396)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~ 365 (396)
.++.+.+.....+.+.......|...++..+. .++|+.+.+.....+.+|..++|.+.+.+.+ .++...++..+..
T Consensus 91 -~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 91 -AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred -cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 22333333344444444555666665666654 3467888899999999999999999999988 4666666555543
Q ss_pred HH
Q 016055 366 CS 367 (396)
Q Consensus 366 ~~ 367 (396)
..
T Consensus 168 ~~ 169 (382)
T PRK11128 168 VA 169 (382)
T ss_pred HH
Confidence 33
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.77 E-value=6.9e-08 Score=79.50 Aligned_cols=160 Identities=17% Similarity=0.135 Sum_probs=103.3
Q ss_pred hcchhhhHHhHHHHHHHcCCCchhHHHHH---HHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhh
Q 016055 207 FGGVNGIAFYASSIFISAGFSGSIGMIAM---VVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQ 283 (396)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (396)
.+..+....|.|.+.+..+++......+. .++..+ .+..|.+.|++|++.++.++.....++...+.......-
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i-- 91 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI-- 91 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 33467788899999999999887444443 345444 478899999999999999999999999887766432111
Q ss_pred hcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHH
Q 016055 284 QWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFS 363 (396)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 363 (396)
+..+.+.+.....+.+...............+.+|. +||++.|+.-....+++.+-..+...+.+.+...-..+.+
T Consensus 92 ---~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la 167 (250)
T PF06813_consen 92 ---PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLA 167 (250)
T ss_pred ---CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 012233333333333222222334444555578885 7999999999999999988888877777644333344444
Q ss_pred HHHHhhHhhe
Q 016055 364 AICSLTVLFV 373 (396)
Q Consensus 364 ~~~~~~~~~~ 373 (396)
....+.+++.
T Consensus 168 ~~~~~v~l~~ 177 (250)
T PF06813_consen 168 VLPAVVCLVA 177 (250)
T ss_pred HHHHHHHHHH
Confidence 4444443333
No 221
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.76 E-value=8.9e-08 Score=86.17 Aligned_cols=143 Identities=23% Similarity=0.226 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+++++|++..++++||+|||..+.+..++...+.++...... .+....+...-++.+.......
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~---------~~~~e~li~GR~i~Gl~~gl~~ 134 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS---------APSFEMLILGRLIVGLACGLST 134 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHHHhHHHH
Confidence 3445556899999999999999999999988888888888777776543 3334455555555555555555
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh-HHHHHh-cccchhHHHHHHHHhhHhheeeecCCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF-NFLMKW-SSTGTFFAFSAICSLTVLFVAKLVPETK 381 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (396)
.....+..|..|++.||....+......+|..++..+. ..+... ..+........+..+..++...+.||..
T Consensus 135 ~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESP 208 (485)
T KOG0569|consen 135 GLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESP 208 (485)
T ss_pred HHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 66668999999999999999998888888888884443 333322 2222333344444445555566777764
No 222
>PRK09848 glucuronide transporter; Provisional
Probab=98.76 E-value=1.8e-07 Score=86.11 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=84.4
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHhhhhhcccccceeeecccCCC----
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN---- 81 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---- 81 (396)
+.+++.++++++.||+|+|+++..+.++.+++.++..+.+ +++.+.+..++.|+|.+...+...++..|..|++
T Consensus 276 ~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~ 355 (448)
T PRK09848 276 GTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLT 355 (448)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 3455677899999999999999999999888887777654 5677777788999999999999999998888754
Q ss_pred ---cchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 82 ---LRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 82 ---~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
++|...+..+....+|..+++.+.+.+
T Consensus 356 g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 356 GVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999998877654
No 223
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.76 E-value=3.9e-07 Score=79.99 Aligned_cols=114 Identities=17% Similarity=0.116 Sum_probs=79.9
Q ss_pred HHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHH
Q 016055 15 FFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMI 94 (396)
Q Consensus 15 ~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 94 (396)
.+.+..+|...+.=+.....+..++.++.++++|.+.=+++-.+.+++.|........+.. .+++ ...+-+..|.
T Consensus 78 ~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~wssGT 152 (402)
T PF02487_consen 78 IAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSAWSSGT 152 (402)
T ss_pred HhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----cccccccCCc
Confidence 3566678887555555666788888999999999999899999999999998888777644 5553 3467777777
Q ss_pred HHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhc-cCC
Q 016055 95 CIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCF-IPE 133 (396)
Q Consensus 95 ~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~-~~e 133 (396)
+.+.++|+..-..+ +-|..+++...+.++..+..++ +|+
T Consensus 153 G~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 153 GGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred ChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 77777777654433 4577777766665555444443 443
No 224
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.74 E-value=2.5e-08 Score=88.25 Aligned_cols=143 Identities=17% Similarity=0.094 Sum_probs=98.3
Q ss_pred CCchhHHHHH---HHHHHHHhhHHHHHHhhc-CCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHH
Q 016055 226 FSGSIGMIAM---VVIQIPMTLLGVLLMDKS-GRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYT 301 (396)
Q Consensus 226 ~~~~~~~~~~---~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (396)
++.+...... +...-+..+++|+++||+ |+|+.+..+.++..++.+++.... ......+...+.+.
T Consensus 58 ~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~----------~~~~~gl~i~L~~I 127 (498)
T COG3104 58 FDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS----------VSGPGGLYIGLALI 127 (498)
T ss_pred cChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc----------cccccHHHHHHHHH
Confidence 6666333333 333445578999999995 999999999999999999998731 02233333333344
Q ss_pred HHhhccccchhhhhhcccCCcC--cchhhhHHHHHHHHHHHHHHHHHhHHHHHhcccchhHHHHHHHHhhHhheeeecC
Q 016055 302 GSFSLGMGGIPWVIMSEVFPIN--MKGSAGSLVTLVSWLGSWIISFTFNFLMKWSSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
..+.+..=|....+..|++|++ +|-.++++.....++|+.++|.+.+++.+..++...+..+.+....+++.+...+
T Consensus 128 ~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 128 IVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4555566666678999999874 3677888888889999999999999999955455555555555555555444433
No 225
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.71 E-value=1.5e-07 Score=84.99 Aligned_cols=120 Identities=12% Similarity=-0.053 Sum_probs=89.3
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh------hchhhHHHHHHHHHHhhhhhcccccceeeecccCC-
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF------SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK- 80 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~- 80 (396)
+.+.+..+.|++.||+|+|+.+..+..+.++..+.... .++...+.....+.+++.+...+...+...+..++
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 335 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG 335 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 45566778999999999999998887766443333221 12334445555666777777777777777777776
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHH
Q 016055 81 NLRGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIG 127 (396)
Q Consensus 81 ~~r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~ 127 (396)
+++++.+++.+...++|..++|.+++.+ ||+..|.+.+...++..+.
T Consensus 336 ~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 336 DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999887 7888888877766665443
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=5.2e-08 Score=88.45 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
........+.+++.+..+++.||+|.|+++..+.++.+++.++..+.. ......++..-++.|...+...
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa----------~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA----------SIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH----------HhcchhhHHHHHHhHHHHhHHH
Confidence 566777789999999999999999999999999999988888887753 2233355667777777777788
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH--hcccchhHHHHHHHHhhHhheeeecCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK--WSSTGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
|....+..+-.|+++|++..++.....++|.+++-++.|.+.+ .|+...+++.+++..+..++..++..++
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888999999999999999999999999999999999999998 5788888999998888877766665544
No 227
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.5e-07 Score=84.30 Aligned_cols=141 Identities=15% Similarity=0.008 Sum_probs=109.3
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++.+++.+.++.+.||++..+.+ ..+.+...++.+.... .++...+++.-++.|.+..+..
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l----~~~~~~w~~~~~~~~~--------~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGL----SVSGILWGLFGFLTAA--------VHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHH----HHHHHHHHHHHHHHHH--------HhhhHHHHHHHHHHHHHhcccc
Confidence 666777789999999999999999943333 2233333222221110 2345666777788888898999
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-------hcccchhHHHHHHHHhhHhheeeecCCCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-------WSSTGTFFAFSAICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (396)
|....++...+.+++|+.-+|+.++...+|+++|+++...+.+ .++.+.|++-+++.++.+++.++++|+...
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999999999999999887532 677888999999999999999888887654
No 228
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=1.4e-07 Score=88.29 Aligned_cols=139 Identities=20% Similarity=0.190 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055 229 SIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM 308 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
++......++..++.++.|+++|++|||+.+.++.+...++.++.... .+...+...-++.+...++.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a------------~~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA------------PSWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHhccchhhh
Confidence 366777778999999999999999999999999999999999998873 35555666666666666666
Q ss_pred cchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh---cccchhHHHHHHHHhhHhheeeecCCCC
Q 016055 309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW---SSTGTFFAFSAICSLTVLFVAKLVPETK 381 (396)
Q Consensus 309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (396)
..+...+.+|..|++.||...+..+....+|..++ ++.+...+. ++...+.+..+..++..+. .++.||+.
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 67777999999999999999999999988888887 444444442 3333344444444444444 55666553
No 229
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.6e-07 Score=81.84 Aligned_cols=102 Identities=11% Similarity=0.142 Sum_probs=75.3
Q ss_pred hhHHHHHhhh----hchhhhHHhh-HHHHHHHHHHHHHhhchhh-----------------HHHHHHHHHHhhhhhcccc
Q 016055 12 NVCFFIFWLP----CALWKQTMGF-SDIVCIIGWVIIVFSKAAW-----------------WLDLGRLLVGYGMGLLSYV 69 (396)
Q Consensus 12 ~~~~~G~l~d----r~Grk~~~~~-~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~ 69 (396)
-.|+.|..+| ||||||.++. +.+..+++.++..++.++. .++++--+.=++.......
T Consensus 83 vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp 162 (498)
T KOG0637|consen 83 VQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGP 162 (498)
T ss_pred ecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhh
Confidence 3456899999 5897766655 5566677777777764432 2344444555566677788
Q ss_pred cceeeecccCCCcchh-HHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 016055 70 VPVYIAEITPKNLRGG-FTTVHQLMICIGVSMTYLIGAFLNWRIL 113 (396)
Q Consensus 70 ~~~~i~~~~~~~~r~~-~~~~~~~~~~lG~~~~~~l~~~l~wr~~ 113 (396)
+-+++.|...+++|.+ +.+++....++|..+|..++.+.+|+-.
T Consensus 163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~ 207 (498)
T KOG0637|consen 163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKI 207 (498)
T ss_pred HHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEE
Confidence 8899999998777766 9999999999999999999988876643
No 230
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.62 E-value=1.2e-07 Score=82.21 Aligned_cols=125 Identities=18% Similarity=0.094 Sum_probs=108.2
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTV 89 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 89 (396)
+.++.++|+|.||+|.|+++..++++..+.++...+...-..+.+.-.+.|...|.....+-++..+..|++|-++.+|+
T Consensus 302 ~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 302 ALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeeh
Confidence 45566799999999999999999999999998888877777777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh-----hHHHHHHHhhHHHHHHHHHHhccCCC
Q 016055 90 HQLMICIGVSMTYLIGAFL-----NWRILALIGTIPCLVQLIGLCFIPES 134 (396)
Q Consensus 90 ~~~~~~lG~~~~~~l~~~l-----~wr~~f~~~~~~~~~~~~~~~~~~e~ 134 (396)
+....-.+..+||.+-+.+ +-|.-+....++..+.++..+.+|+.
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999988877 67777776666666677777777664
No 231
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.59 E-value=1e-06 Score=74.03 Aligned_cols=315 Identities=12% Similarity=0.117 Sum_probs=183.6
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTV 89 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 89 (396)
++...+.=.+.|..-.|+++++-.+-......+..+.++.+.+=+.-++-|...+ ...+-++++-+..+|+++.++.+.
T Consensus 56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y 134 (433)
T KOG3810|consen 56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGY 134 (433)
T ss_pred HHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHH
Confidence 3444456678899999999999888888888888899999999999999998764 457788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCCcchHH
Q 016055 90 HQLMICIGVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGADADISE 163 (396)
Q Consensus 90 ~~~~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (396)
.-+..-.|...|..++..+ +....-.+......++.....++|..+|.+..+.++++.. ..+..+.+. ..
T Consensus 135 ~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~--v~~~e~~~~--~~ 210 (433)
T KOG3810|consen 135 CRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS--VGDLEEMNP--QA 210 (433)
T ss_pred hHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce--eccchhcCc--cc
Confidence 9888888888888887776 4444445555555556667778887776554443333211 111111000 00
Q ss_pred HHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch-----hHHHHHHHH
Q 016055 164 EAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS-----IGMIAMVVI 238 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 238 (396)
+..+ ..+.....-...+.+..+++.. +...+.+....++++-...|.+.+-++..-++. ..-.+..+.
T Consensus 211 ~~~~---~l~~~~~~l~~~l~~~y~np~l----l~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlL 283 (433)
T KOG3810|consen 211 SYMS---YLRGAFVLLWRDLQECYSNPRL----LKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLL 283 (433)
T ss_pred hhhH---HHHHHHHHHHHHHHHHhcCchh----hhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHH
Confidence 0000 0000000011123333444332 333444455555677777888777776642222 333444456
Q ss_pred HHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcc
Q 016055 239 QIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSE 318 (396)
Q Consensus 239 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (396)
++++.+..|.+.-.+.|..-+.++..-...+..++... . ..+.+.......++...+... .++...-+++
T Consensus 284 Ga~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~----~-----t~~Iw~~Ya~yvlfr~~y~l~-itiA~~~iA~ 353 (433)
T KOG3810|consen 284 GAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA----Q-----TQHIWVCYAGYVLFRVIYQLT-ITIATFQIAR 353 (433)
T ss_pred HHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh----c-----ccceehhhhhHHHHHhhHhhh-hhHHHHHHHH
Confidence 67777778887666665432222222111111111111 0 133445555555554444433 2333345556
Q ss_pred cCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 016055 319 VFPINMKGSAGSLVTLVSWLGSWIISFT 346 (396)
Q Consensus 319 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 346 (396)
....+.-|..+|+..+..-+-..+-..+
T Consensus 354 nL~~e~~gLvFGiNTFvAl~lQsilT~i 381 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFVALILQSILTLI 381 (433)
T ss_pred hhhhhhheeeeehHHHHHHHHHHhheEE
Confidence 6667778888998877766555555444
No 232
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.57 E-value=6e-05 Score=68.46 Aligned_cols=96 Identities=7% Similarity=-0.014 Sum_probs=71.9
Q ss_pred hHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh----ch---------------------------hhHHHHHHHHHHh
Q 016055 13 VCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS----KA---------------------------AWWLDLGRLLVGY 61 (396)
Q Consensus 13 ~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~----~~---------------------------~~~l~~~r~l~G~ 61 (396)
.++.+++++|++|++++-.....+.....++++. ++ .|...+.-+...+
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 5678999999999999998887777776666554 11 2223333334444
Q ss_pred hhhhccc-ccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 62 GMGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 62 ~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
-...... .-..++.|.++.+|-.|..++...+.++|.++++.+..++
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4344444 6667889999999999999999999999999999887775
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.55 E-value=4.2e-07 Score=79.15 Aligned_cols=116 Identities=19% Similarity=0.208 Sum_probs=94.3
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhch--hhHHHHHHHHHHhhhhhcccccceeeecccCC-Ccc
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKA--AWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK-NLR 83 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r 83 (396)
.+...+.++.|.++||+|||+.+..+.....++.+.+.+..+ .+.+.+.|+.+|++.+...+...+++.|+.|+ ++|
T Consensus 50 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 129 (338)
T COG0477 50 LGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATER 129 (338)
T ss_pred HHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHH
Confidence 344455578999999999999998888776666777777776 89999999999999999999999999999987 678
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHhhhh------hHHHHHHHhhHHHH
Q 016055 84 GGFTTVHQL-MICIGVSMTYLIGAFL------NWRILALIGTIPCL 122 (396)
Q Consensus 84 ~~~~~~~~~-~~~lG~~~~~~l~~~l------~wr~~f~~~~~~~~ 122 (396)
+...+.... ...+|..+++.+++.+ +||..|.+......
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 130 GLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 998888888 5788888888776655 68886666555443
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.55 E-value=1.1e-06 Score=81.52 Aligned_cols=101 Identities=10% Similarity=0.131 Sum_probs=79.4
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh-----hchhhHHHHHHHHHHhhhhhcccccceeeecccC---
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF-----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP--- 79 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--- 79 (396)
+.+++.+++++++||+|+|+.+..+.++..++.+...+ .++.+.+++.-++.|++.+...+...+++.|..+
T Consensus 278 ~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e 357 (473)
T PRK10429 278 ANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGE 357 (473)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 44566778999999999999999888877766655432 3456677777788999999999998999999865
Q ss_pred ----CCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 80 ----KNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 80 ----~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
+++.|...+......-+|..+++.+.+.+
T Consensus 358 ~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 358 YKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33346688998888888988888877765
No 235
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.55 E-value=7.3e-07 Score=81.54 Aligned_cols=105 Identities=16% Similarity=0.233 Sum_probs=91.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHhhhhhcccccceeeecccCC-
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK- 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~- 80 (396)
.+..+.+++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...++++|..+.
T Consensus 268 ~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~ 347 (428)
T PF13347_consen 268 IFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYD 347 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhH
Confidence 34556677888899999999999999999999999999988876 999999999999999999999999999998873
Q ss_pred ------CcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 81 ------NLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 81 ------~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
++.|...+..+....+|..+++.+.+.+
T Consensus 348 e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 348 EWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 3358888999988888888888877655
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.5e-06 Score=75.02 Aligned_cols=131 Identities=11% Similarity=-0.062 Sum_probs=99.0
Q ss_pred hHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccch
Q 016055 213 IAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKAT 289 (396)
Q Consensus 213 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
.....|.+.+..+.+.. ........+..++++..+++.||+|+|+-+..+..++++++.++.-... ..
T Consensus 32 ~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~---------~~ 102 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS---------SK 102 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh---------hh
Confidence 33445555555566554 5556666788888999999999999999999999999999988864321 23
Q ss_pred hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 290 PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+...+...+..+.+.....+..+.++....|++..+.-+.+.+.++.+|++++|.+++.+..
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 344444444455555555556667899999999888889999999999999999999998876
No 237
>PRK09669 putative symporter YagG; Provisional
Probab=98.55 E-value=8.2e-07 Score=81.64 Aligned_cols=101 Identities=12% Similarity=0.118 Sum_probs=79.1
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh--hchhhHHHHHHHHHHhhhhhcccccceeeecccCC-----
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF--SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK----- 80 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~----- 80 (396)
+.+++.+++++++||+|+|+.+..+.++.++......+ .++.+.+++..++.|++.+...+...++++|..+.
T Consensus 276 ~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~ 355 (444)
T PRK09669 276 AGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRS 355 (444)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence 34466778999999999999999888776654443322 35677788888999999999999999999988752
Q ss_pred --CcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 81 --NLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 81 --~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
++.|...+.......+|..+|+.+++.+
T Consensus 356 G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 356 GRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred CcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346778888888889999998888765
No 238
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.54 E-value=1.8e-09 Score=99.48 Aligned_cols=142 Identities=26% Similarity=0.264 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++..+|+++.|+++||+|||+.+..+..+..++.++..+... ..+...+...-++.|...++..
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS---------YNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHhhhccccccccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccc
Confidence 4456666889999999999999999999999999999999888887310 0145555566666777777777
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhcc---cchhHHHHHHHHhhHhheeeecCCC
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWSS---TGTFFAFSAICSLTVLFVAKLVPET 380 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (396)
+....++.|..|++.|+...++.+....+|..++..+.-...+... +........+..+...+...+.||+
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8888999999999999999999998888888877766544433222 3333344444443344445556654
No 239
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.54 E-value=1.6e-07 Score=82.88 Aligned_cols=173 Identities=17% Similarity=0.062 Sum_probs=86.6
Q ss_pred hhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchH
Q 016055 189 RKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAG 265 (396)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 265 (396)
++..+......+..++.. ....+++...+.+..|++.. .......+..++.+++.|.++||.+.||-++.....
T Consensus 6 ~~~~~~~s~~~f~~Ff~~---gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~ 82 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIW---GIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAI 82 (412)
T ss_dssp SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHH---HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHH
Confidence 444444444444444432 22334443333345788877 444455567778888999999999977655433322
Q ss_pred HHH--HHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHH
Q 016055 266 TCL--GCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWII 343 (396)
Q Consensus 266 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 343 (396)
..+ +........+... .+.+...+...++.+....+..|+.-+++.+. . ++.+--.|=....+.+|.+++
T Consensus 83 l~~l~~pff~~v~~pll~------~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s-r~~~feYG~~R~wGSig~ai~ 154 (412)
T PF01306_consen 83 LLLLFGPFFIYVFGPLLQ------SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S-RRNGFEYGRARMWGSIGFAIA 154 (412)
T ss_dssp HHHTCHHHHHHTHHHHHH------TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H-HHHSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHcccchHHHHHHHHH-H-HHhcCCcchHHHHhhHHHHHH
Confidence 211 1111111100000 11111111111111111222223333444332 1 234566788899999999999
Q ss_pred HHHhHHHHHhcccchhHHHHHHHHhhHhh
Q 016055 344 SFTFNFLMKWSSTGTFFAFSAICSLTVLF 372 (396)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (396)
..+.|.+.+.+++..+++......+..++
T Consensus 155 s~~~G~L~~i~p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 155 SLLAGILFNINPNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhheeeeeCccHHHHHHHHHHHHHHHH
Confidence 99999999977777777655544444433
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.1e-06 Score=71.35 Aligned_cols=284 Identities=13% Similarity=0.067 Sum_probs=141.1
Q ss_pred hhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhccccccee-eecccCCCcchhHHH
Q 016055 10 LSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVY-IAEITPKNLRGGFTT 88 (396)
Q Consensus 10 ~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~ 88 (396)
+....+.|-++||-|||+.-+.-++.+.+++ +.-.+++|..++++|.+-|++.+..+....++ +.|.-+ +|+.-.-
T Consensus 86 mLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne--kr~Feqq 162 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQ 162 (454)
T ss_pred HHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHh
Confidence 3344458999999999998766666665544 33457899999999999999998888777664 456543 2332222
Q ss_pred HHH--------HHHHHHHHHHHHHhhhh-hH-----HHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHH
Q 016055 89 VHQ--------LMICIGVSMTYLIGAFL-NW-----RILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRL 154 (396)
Q Consensus 89 ~~~--------~~~~lG~~~~~~l~~~l-~w-----r~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~ 154 (396)
+.. .+..+=.+++.+.+..+ +| -.+|-..+....+...+.+. .|-..-+++.|.++.+.+.
T Consensus 163 Wls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~-----~W~ENygdps~~kdlltqf 237 (454)
T KOG4332|consen 163 WLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILS-----SWSENYGDPSENKDLLTQF 237 (454)
T ss_pred hhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHh-----hhhhccCChhhhHHHHHHh
Confidence 211 12222233333333333 33 34554433332222221111 1222222222222111111
Q ss_pred hCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHH-HcCCCchhHHH
Q 016055 155 RGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFI-SAGFSGSIGMI 233 (396)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (396)
+...+.+..+ ++..+.-.+........+.....|.|.+-. +.+...+....
T Consensus 238 -------------------------~gaa~aiaSD---~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFa 289 (454)
T KOG4332|consen 238 -------------------------KGAARAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFA 289 (454)
T ss_pred -------------------------hHhHHHHhcc---hHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHH
Confidence 1111222222 122233333444444444444455554421 23444446677
Q ss_pred HHHHHHHHHhhHHHHHHhhcCCc--ceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccch
Q 016055 234 AMVVIQIPMTLLGVLLMDKSGRR--PLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGI 311 (396)
Q Consensus 234 ~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
...+..++|+-+..++..|-..| ..+.+.+.+......+...... ..+. ..++...+++.+.+-. ..+.+.|.
T Consensus 290 tFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~---vsP~-kes~~~s~i~F~~~E~-cvGlfwPS 364 (454)
T KOG4332|consen 290 TFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS---VSPS-KESPSESLIGFCLFEA-CVGLFWPS 364 (454)
T ss_pred HHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc---cCCC-cCCchHHHHHHHHHHH-HHhhcchH
Confidence 77778888887777776654332 2333344333333333322221 1111 1223333444444433 34455666
Q ss_pred hhhhhcccCCcCcchhhhHHHHH
Q 016055 312 PWVIMSEVFPINMKGSAGSLVTL 334 (396)
Q Consensus 312 ~~~~~~~~~p~~~~~~~~g~~~~ 334 (396)
..-+-.+..|++.|++.+-....
T Consensus 365 imkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 365 IMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred HHHHHHhhCCHHHHhhhhhheec
Confidence 66777888999988877655543
No 241
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.49 E-value=1.5e-05 Score=70.92 Aligned_cols=55 Identities=9% Similarity=0.000 Sum_probs=38.3
Q ss_pred HHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 54 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 54 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
...++.=+-.+....+.-.+.-...++++++.+......+.++|..++..+--.+
T Consensus 123 ~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 123 WFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 3333444445555666666667777889999999888888888888877654444
No 242
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.47 E-value=6.3e-07 Score=82.51 Aligned_cols=174 Identities=16% Similarity=0.131 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHH
Q 016055 193 HSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLG 269 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 269 (396)
|......++......+.......+.+.+.++.+.+.+ +...+.........++.+.+.||+|.|.+.+.|.++..++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 4444555555555555555555666677777766555 5555555677777889999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHH
Q 016055 270 CLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNF 349 (396)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 349 (396)
+++..+. .+.+..++..-+..+.+.........+.+... .+++|+.+.|+......+|.++-|.+...
T Consensus 125 ~~lssF~-----------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-F~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 125 LLLSSFA-----------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTY-FEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHH-----------hhHHHHHHHHHHHhhccchhhhcchhhhhhhH-hHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 9988885 33344444444444444433334443555544 45689999999999999999999999999
Q ss_pred HHH-hcccchhHHHHHHHHhhHhheeeecC
Q 016055 350 LMK-WSSTGTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
+.+ .++....++.+.+.+-.........|
T Consensus 193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888 78888888888777665555544444
No 243
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.45 E-value=2.3e-06 Score=76.77 Aligned_cols=120 Identities=21% Similarity=0.303 Sum_probs=95.0
Q ss_pred HHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-chhhHHHHH----HHHHHhhhhhcccccceeeecccCCCcchhHHHH
Q 016055 15 FFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-KAAWWLDLG----RLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTV 89 (396)
Q Consensus 15 ~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~----r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 89 (396)
+.+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+. ..++|+..+..+.....++.+.+|++.|+++.++
T Consensus 262 ~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 262 FSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHH
Confidence 57899999999999999999999988888877 555544333 4569999999999999999999999999999999
Q ss_pred HHH-HHHHHHHHHHHHhhhh----------hHHHHHHHhhHHHHHHHHH-HhccCCC
Q 016055 90 HQL-MICIGVSMTYLIGAFL----------NWRILALIGTIPCLVQLIG-LCFIPES 134 (396)
Q Consensus 90 ~~~-~~~lG~~~~~~l~~~l----------~wr~~f~~~~~~~~~~~~~-~~~~~e~ 134 (396)
+.. ..++|..+|..+++++ .|...+.+.+...++..++ ..+++|+
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 876 4689999999999987 3555666666655555443 3344543
No 244
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.45 E-value=1.8e-06 Score=71.19 Aligned_cols=121 Identities=13% Similarity=0.170 Sum_probs=90.7
Q ss_pred HHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-------chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 14 CFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-------KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 14 ~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
++.|.+.||+|++.++.+|.+...+|..+...+ .++|.+.+..++.|.+.+.....+.....+.+| ++||++
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~v 132 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTV 132 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCce
Confidence 458999999999999999999999998877553 467888888888888877776776666678887 579999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhccCCCh
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCFIPESP 135 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~~~e~p 135 (396)
.++.-...+++..+-..+...+ .-+..+.+...+.++.++...++++.|
T Consensus 133 vgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 133 VGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 9999999999888777666655 234444444445555555555554443
No 245
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.40 E-value=1.5e-06 Score=75.47 Aligned_cols=113 Identities=6% Similarity=-0.010 Sum_probs=87.3
Q ss_pred ccccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc
Q 016055 3 LSFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL 82 (396)
Q Consensus 3 ~~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 82 (396)
..|+++++++-.+.+++.||+|+||++..+..+..++.++....++.... ..-++.|++.+..+|...+...+..|++
T Consensus 185 s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~- 262 (310)
T TIGR01272 185 AYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH- 262 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-
Confidence 35778899999999999999999999999888888877666665544333 4556889999999999999888888754
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhh
Q 016055 83 RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGT 118 (396)
Q Consensus 83 r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~ 118 (396)
.+++.++. ....+|..+.|.+.+.+ |.+..|++..
T Consensus 263 ~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 263 TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 56666775 45668999999877776 6667766433
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.37 E-value=6.2e-07 Score=78.42 Aligned_cols=113 Identities=19% Similarity=-0.003 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......++.+.|+++.|++.||+|||+++-..++++.++.++.++..... ++......+...-.+.+.+.++-+
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~-----~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTT-----SPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCC-----CCcchhhHHHHHHHHhhccccCCC
Confidence 566667789999999999999999999999888888888877554421111 011234555666677777788889
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF 347 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 347 (396)
|+..+.++|....+.||+-.+.....+..|...|..+.
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 99999999999999999988887776666555554443
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.37 E-value=5e-05 Score=68.04 Aligned_cols=104 Identities=21% Similarity=0.278 Sum_probs=84.9
Q ss_pred hHHhhHHHHHHHHHHHHHhh--c-hh------hHHHHHHHHHHhhhhhcccccceeeecccCCC---cchhHHHHHHHHH
Q 016055 27 QTMGFSDIVCIIGWVIIVFS--K-AA------WWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN---LRGGFTTVHQLMI 94 (396)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~--~-~~------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 94 (396)
|++.++.++..+|.++..++ + +. +.++++-.+.++|.|+.-|...++.+|-++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788899999999884443 2 22 67899999999999999999999999999876 3567788899999
Q ss_pred HHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHHhc
Q 016055 95 CIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGLCF 130 (396)
Q Consensus 95 ~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~~~ 130 (396)
++|..++..+..++ +|.+.|.+.++..+++++..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999888 8999999988877777665444
No 248
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.36 E-value=1.4e-05 Score=68.25 Aligned_cols=91 Identities=9% Similarity=0.000 Sum_probs=63.2
Q ss_pred HHHHhhh-----hchhhhHHhh-HHHHHHHHHHHHHhh-----------chhhHHHHHHHHHHhhhhhcccccceeeecc
Q 016055 15 FFIFWLP-----CALWKQTMGF-SDIVCIIGWVIIVFS-----------KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEI 77 (396)
Q Consensus 15 ~~G~l~d-----r~Grk~~~~~-~~~~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 77 (396)
+|.++.| |+||||..+. +..+.+..+.+.+.- ++...+....++.-+..+....+.-.+.-.+
T Consensus 82 lWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtm 161 (510)
T KOG3574|consen 82 LWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTM 161 (510)
T ss_pred HHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHh
Confidence 5888999 9999887655 333333333333321 3444455556677777777777777777788
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 016055 78 TPKNLRGGFTTVHQLMICIGVSMTYLIG 105 (396)
Q Consensus 78 ~~~~~r~~~~~~~~~~~~lG~~~~~~l~ 105 (396)
.++++.|-+......+.+.|..++..+-
T Consensus 162 Ls~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 162 LSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred cCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 8889989888888888888888776543
No 249
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.35 E-value=3.4e-06 Score=75.39 Aligned_cols=145 Identities=15% Similarity=0.119 Sum_probs=99.0
Q ss_pred HhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh
Q 016055 215 FYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF 291 (396)
Q Consensus 215 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (396)
+++-..+++.+..+. ......-.+.++.-++.+++.+|+|+-+++..++....+=++.+... .++
T Consensus 392 tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L------------~n~ 459 (618)
T KOG3762|consen 392 TFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL------------QNP 459 (618)
T ss_pred HHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh------------cCc
Confidence 333334555553332 33344446777778889999999999999988888777766666653 334
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHH-HHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhh
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVS-WLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~ 369 (396)
+.++.+=++.+...........+|++...||+.|+++.++..... .+|-.+|.+++|.+.+ .+....+.++++.+++.
T Consensus 460 W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~ 539 (618)
T KOG3762|consen 460 WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVT 539 (618)
T ss_pred hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHH
Confidence 444444444444444445555699999999999999999998875 4788899999998888 55555566655555444
Q ss_pred Hh
Q 016055 370 VL 371 (396)
Q Consensus 370 ~~ 371 (396)
.+
T Consensus 540 l~ 541 (618)
T KOG3762|consen 540 LA 541 (618)
T ss_pred HH
Confidence 43
No 250
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.35 E-value=1.1e-05 Score=72.29 Aligned_cols=105 Identities=11% Similarity=0.189 Sum_probs=85.2
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhc--hhhHHHHHHHHHHhhhhhcccccceeeecccCC-
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSK--AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPK- 80 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~- 80 (396)
.+..+.+++.+++.++.+|+|+|+++..+.++..++.++.-+.+ +....++..++.+++.+...+...++++|..+-
T Consensus 280 ~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyg 359 (467)
T COG2211 280 ASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYG 359 (467)
T ss_pred HHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHH
Confidence 34556677788899999999999999999999999999988875 788888999999999999999999999887642
Q ss_pred ------CcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 81 ------NLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 81 ------~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
+.-|...+......=+|..++..+.++.
T Consensus 360 e~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 360 EWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2236777777766667777777655544
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.31 E-value=5.8e-05 Score=70.44 Aligned_cols=124 Identities=12% Similarity=0.076 Sum_probs=92.5
Q ss_pred ccchhhhhhHHHHHhhhhc-hhhhHHhhHHHHHHHHHHHHHhhch-------------------------hhHHHHHHHH
Q 016055 5 FHSDLLSNVCFFIFWLPCA-LWKQTMGFSDIVCIIGWVIIVFSKA-------------------------AWWLDLGRLL 58 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~-Grk~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~l~~~r~l 58 (396)
|.|..-....+++.++|-| ||-+++.++.++..++..+..++.. ...+....-+
T Consensus 82 f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~l 161 (571)
T KOG1237|consen 82 FGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYL 161 (571)
T ss_pred HhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHH
Confidence 4444455556799999976 9999999999998888655443211 1246666777
Q ss_pred HHhhhhhcccccceeeecccC---CCc---chhHHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHH
Q 016055 59 VGYGMGLLSYVVPVYIAEITP---KNL---RGGFTTVHQLMICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 128 (396)
Q Consensus 59 ~G~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~ 128 (396)
..+|.|+.-|...++-+|-++ +++ +...+.++....+.|..++..+-.+. +|.+-|.+..+...+++++.
T Consensus 162 ia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 162 IALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred heeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 888999999999999999888 322 23678888999999999988887777 89999988777666555443
No 252
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.31 E-value=1.9e-06 Score=77.29 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCC-cceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGR-RPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGM 308 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (396)
+......++..++++..|+...|.+. |+.++.+.+++.++.++.....+.. ...-..++..-++.| .+.+.
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~-------~~~~y~mL~~R~l~G-vg~~n 146 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP-------NGVKYLMLVARILTG-VGVGN 146 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc-------cchHHHHHHHHHHcC-cCccc
Confidence 56666778999999999999999886 8888899999999999885432211 112222333333332 33344
Q ss_pred cchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHh--------------cccchhHHHHHHHHhhHhhee
Q 016055 309 GGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKW--------------SSTGTFFAFSAICSLTVLFVA 374 (396)
Q Consensus 309 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 374 (396)
....-.|+++..-.++|.++++..+....+|.++||.+...+... -+..+.|+.+.+.++..++..
T Consensus 147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 556679999988888999999988888888888888776544321 123445666666666666555
Q ss_pred eecCCCC
Q 016055 375 KLVPETK 381 (396)
Q Consensus 375 ~~~~~~~ 381 (396)
...+|..
T Consensus 227 ~~f~E~~ 233 (488)
T KOG2325|consen 227 FFFKEVY 233 (488)
T ss_pred hheeecc
Confidence 5555543
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.27 E-value=5.4e-06 Score=63.03 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=86.3
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
+...++.++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-.+.|++.+..++....++.+..++++|++.
T Consensus 48 ~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~ 126 (156)
T PF05978_consen 48 GSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRN 126 (156)
T ss_pred HHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhH
Confidence 4456777888999999999999999999988655443 567888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 016055 87 TTVHQLMICIGVSMTYLIGAF 107 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~ 107 (396)
.++.......+.++|.++...
T Consensus 127 ~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 127 TGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888888766544
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.25 E-value=9.5e-06 Score=73.63 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=99.8
Q ss_pred HHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhh
Q 016055 235 MVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWV 314 (396)
Q Consensus 235 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (396)
.++..++.++..|.++||+|||..+........+....+.+. . ++... ..-..+ ..........+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~------------~-~~~~~-~~~l~g-~~~~~~s~~~a 135 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ------------G-YWFFL-LLGLSG-GFSAIFSVGFA 135 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH------------H-HHHhh-hccccc-chhhhhhhhhh
Confidence 367788889999999999999998888777776666666552 1 22222 111112 22233455668
Q ss_pred hhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhheeeecCCCCCCChH
Q 016055 315 IMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVAKLVPETKGRTLE 386 (396)
Q Consensus 315 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (396)
+++|....+.|....|+.+.....+..++|.+.+.+.+ .+....+.+..+...+........+||+..++.+
T Consensus 136 ~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 136 YVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred heeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 99999999999999999999999999999999999998 5556666666666666666677777876554433
No 255
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.25 E-value=2.9e-06 Score=78.25 Aligned_cols=102 Identities=12% Similarity=0.155 Sum_probs=85.6
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh----------hchhhHHHHHHHHHHhhhhhcccccceeeec
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF----------SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAE 76 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 76 (396)
.+.+++....+++.+|++.|+++.++.++.+++.+.... .++.+.....-++.+++.+........++.+
T Consensus 299 v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 378 (468)
T TIGR00788 299 LGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLAR 378 (468)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHH
Confidence 345566677888889999999999999999988765431 1444455666788999999999999999999
Q ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 77 ITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 77 ~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
..|+++++...++.+...++|..+++.+++.+
T Consensus 379 ~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 379 LCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred hCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877
No 256
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.19 E-value=3.2e-05 Score=62.99 Aligned_cols=239 Identities=13% Similarity=0.082 Sum_probs=115.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHH--Hhh-----hh--hHHHHHHHhhHHHHHHHHHHhccCCChhHHhhcCChHHHHHH
Q 016055 80 KNLRGGFTTVHQLMICIGVSMTYL--IGA-----FL--NWRILALIGTIPCLVQLIGLCFIPESPRWLAKTGKGIESEAA 150 (396)
Q Consensus 80 ~~~r~~~~~~~~~~~~lG~~~~~~--l~~-----~l--~wr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~ 150 (396)
+|+|+..+.....+.++|.++.-. +-. .+ +|++.+.+.+++.++-++++..+-+.-+ .... + |+
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd-~~~~-~-~k---- 73 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFD-IYSP-K-EK---- 73 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccCc-c-cc----
Confidence 367788888888889999887643 222 11 8999999888877666555544321100 0000 0 00
Q ss_pred HHHHhCCCcchHHHHHHHHHHHHHHhhccchhHHHhhhhhhhhHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCC---
Q 016055 151 LQRLRGADADISEEAAEIREYTETLERLSEGGILELFQRKYAHSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFS--- 227 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 227 (396)
++..+.+.+++.+..+.+|++.-+............. .......+...+....+.+
T Consensus 74 -------------------~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~--V~p~t~~~~~~~~~~s~~ni~~ 132 (267)
T PF07672_consen 74 -------------------QEKENSTLSKKPSYKSILKEKETWKWILIYGIWLVVV--VFPFTPSWFNILIWISPANIKS 132 (267)
T ss_pred -------------------cccccccccccchHHHHHccchHHHHHHHHHHHheeE--EEeccchhHhHhhhcCcccccc
Confidence 0001112233456778888776655444333222211 1111222333233332221
Q ss_pred ---ch-------hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHH-HHhhhhcccchhhHHHHH
Q 016055 228 ---GS-------IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFL-FQDLQQWIKATPFLALVG 296 (396)
Q Consensus 228 ---~~-------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 296 (396)
.+ ........+..+|....|...+..-+||..+...+.+.+...++..... ....+ +.........
T Consensus 133 ~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~---~~~~~~~f~I 209 (267)
T PF07672_consen 133 VVSGGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPG---NAAGFAFFYI 209 (267)
T ss_pred cccccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcc---hHHHHHHHHH
Confidence 11 2223333444555566666666543444443333333332222222221 11111 1223344555
Q ss_pred HHHHHHHhhccccchhhhhhccc--CCcCcchhhhHHHHHHHHHHHHHHHHHhHH
Q 016055 297 VLVYTGSFSLGMGGIPWVIMSEV--FPINMKGSAGSLVTLVSWLGSWIISFTFNF 349 (396)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 349 (396)
..++.+.+.-+..++......|. ..|++-|...|+.-.++++.-.+.-.+...
T Consensus 210 ~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~ 264 (267)
T PF07672_consen 210 FGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSV 264 (267)
T ss_pred HHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777777765555554 344556667777766666665555544443
No 257
>PRK11462 putative transporter; Provisional
Probab=98.11 E-value=3.7e-05 Score=70.92 Aligned_cols=102 Identities=9% Similarity=0.025 Sum_probs=66.1
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhch--hhHHHHHHHHHHhhhhhcccccceeeecccC-----
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKA--AWWLDLGRLLVGYGMGLLSYVVPVYIAEITP----- 79 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~----- 79 (396)
.+.+++.+++++++||+|+|+++..+..+.++..++..+.++ ...+.+.-++.|++.+...+...+++.|..+
T Consensus 274 i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~ 353 (460)
T PRK11462 274 VGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC 353 (460)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh
Confidence 344556678999999999999887665555444444333322 3234445566788777777766777777665
Q ss_pred --CCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 80 --KNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 80 --~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
+++.|...+......-+|..+++.+++.+
T Consensus 354 tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 354 NGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23335556776677777877777766654
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.11 E-value=5e-06 Score=74.32 Aligned_cols=123 Identities=20% Similarity=0.216 Sum_probs=104.2
Q ss_pred cchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchh
Q 016055 6 HSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGG 85 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 85 (396)
++|-+..-++.+++.+|+|+-+++.+++....+=.+..++.+|.|+.+-.-+++|+..+..+....+|+++..||+-|..
T Consensus 416 ~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at 495 (618)
T KOG3762|consen 416 HAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRAT 495 (618)
T ss_pred ccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHH
Confidence 45566677789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHhhhh----hHHHHHHHhhHHHHHHHHHH
Q 016055 86 FTTVHQLM-ICIGVSMTYLIGAFL----NWRILALIGTIPCLVQLIGL 128 (396)
Q Consensus 86 ~~~~~~~~-~~lG~~~~~~l~~~l----~wr~~f~~~~~~~~~~~~~~ 128 (396)
+.++.+.. .++|--+|.++++.+ +=|..|.+.++.+++.++..
T Consensus 496 ~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 496 AQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHH
Confidence 99988654 455555666666555 78888888888777665543
No 259
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.04 E-value=0.00014 Score=62.56 Aligned_cols=153 Identities=20% Similarity=0.179 Sum_probs=83.1
Q ss_pred HHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHH
Q 016055 217 ASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLA 293 (396)
Q Consensus 217 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (396)
.-.++++.|++.. ...........+...+.|.++||+|||+.-+...++..++++.-- .++...
T Consensus 57 ~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-------------~~~~~~ 123 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-------------SSNYPV 123 (354)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-------------ccccHH
Confidence 3345567788766 333333456667778889999999999977666666666665332 233444
Q ss_pred HHHHHHHHHHhhccccchhhh-hhccc----CCcCcchhhhHHHHHH-HHHHHHHHHHHhHHHHH---hcccchhHHHHH
Q 016055 294 LVGVLVYTGSFSLGMGGIPWV-IMSEV----FPINMKGSAGSLVTLV-SWLGSWIISFTFNFLMK---WSSTGTFFAFSA 364 (396)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~-~~~~~----~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~~~~---~~~~~~~~~~~~ 364 (396)
++.--++.+.......+..-+ ++.|. +|++..+...+..... +.+-++.+..+...+.+ .+...++.....
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~ 203 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIV 203 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHH
Confidence 444444444433332222222 23333 4555455555555423 33445555555556555 234556666666
Q ss_pred HHHhhHhheeeecCCCCC
Q 016055 365 ICSLTVLFVAKLVPETKG 382 (396)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~ 382 (396)
+..+..++....-+|+.+
T Consensus 204 ~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 204 LLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHHHHHHHHHhcccccCC
Confidence 666655554444455543
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.01 E-value=4.9e-05 Score=68.84 Aligned_cols=47 Identities=13% Similarity=0.112 Sum_probs=34.2
Q ss_pred HHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh
Q 016055 301 TGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF 347 (396)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 347 (396)
.+...+-..+....+..+..++++|..+..++..+-.+|-.+|..+.
T Consensus 382 ~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 382 FGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334344456667888888889998888888888888888877663
No 261
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.87 E-value=5.4e-05 Score=62.31 Aligned_cols=122 Identities=13% Similarity=0.055 Sum_probs=84.9
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHH-HHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVC-IIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGF 86 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 86 (396)
-.+..+|+.|.++||+|++...+.+..+. .++.....|+ .+.=..+..+.|++...........++-..|+++.|++
T Consensus 312 Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTa 389 (459)
T KOG4686|consen 312 ISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTA 389 (459)
T ss_pred hhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcch
Confidence 34566789999999999998887765544 4444443332 23334566677887766655566677788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-------hHHHHHHH-hhHHHHHHHHHHhcc
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL-------NWRILALI-GTIPCLVQLIGLCFI 131 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l-------~wr~~f~~-~~~~~~~~~~~~~~~ 131 (396)
.+..+...++|-.+.|++++.+ .|--.|.+ .+.+++....+.+.+
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 9999999999999999999988 34444444 444555544444443
No 262
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.85 E-value=0.00034 Score=60.00 Aligned_cols=149 Identities=15% Similarity=0.067 Sum_probs=104.7
Q ss_pred chhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhc
Q 016055 209 GVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW 285 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
..+...-.++.+.++.+.+.+ ....+..++....+++..++.+|+|.++.+..+.++.+++..+=..
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~---------- 96 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL---------- 96 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc----------
Confidence 345556667788888888876 5555666777788899999999999999888888777777665543
Q ss_pred ccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHHhc--ccchhHHHH
Q 016055 286 IKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMKWS--STGTFFAFS 363 (396)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~~~--~~~~~~~~~ 363 (396)
. ....+..-..+.+......+.+....+-+.+|++ -+..+|++.....+++++++.+...+.++. ++......+
T Consensus 97 --~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WA 172 (395)
T COG2807 97 --G-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWA 172 (395)
T ss_pred --c-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHH
Confidence 2 2233333333344444444556668888888874 589999999999999999999988888843 444555555
Q ss_pred HHHHhhHh
Q 016055 364 AICSLTVL 371 (396)
Q Consensus 364 ~~~~~~~~ 371 (396)
....+..+
T Consensus 173 l~allAl~ 180 (395)
T COG2807 173 LLALLALL 180 (395)
T ss_pred HHHHHHHH
Confidence 55544443
No 263
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.80 E-value=0.00038 Score=60.96 Aligned_cols=123 Identities=18% Similarity=0.288 Sum_probs=100.3
Q ss_pred cchhhhhhHHHHHhhh-hchhhhHHhhHHHHHHHHHHHHHh---hchhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 6 HSDLLSNVCFFIFWLP-CALWKQTMGFSDIVCIIGWVIIVF---SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~d-r~Grk~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
.+|.+++....|++.. |.++|+...+++.+..++..+..+ ..+.+.+...-++.|++.|.......+.+.|..+++
T Consensus 254 ~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~ 333 (403)
T PF03209_consen 254 GGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG 333 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc
Confidence 4677777778888877 678888888898888877666444 468889999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhh--------------hHHHHHHHhhHHHHHHHHHH
Q 016055 82 LRGGFTTVHQLMICIGVSMTYLIGAFL--------------NWRILALIGTIPCLVQLIGL 128 (396)
Q Consensus 82 ~r~~~~~~~~~~~~lG~~~~~~l~~~l--------------~wr~~f~~~~~~~~~~~~~~ 128 (396)
+.|..+|.+.....++..++..+++.+ ++...|.+.++..++++.+.
T Consensus 334 ~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 334 RAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888888888766 46667777666665555443
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.71 E-value=0.0053 Score=56.40 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=63.8
Q ss_pred HHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh---------ch----------------------hhHHHHHHHHHHhh
Q 016055 14 CFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS---------KA----------------------AWWLDLGRLLVGYG 62 (396)
Q Consensus 14 ~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~---------~~----------------------~~~l~~~r~l~G~~ 62 (396)
.+..+++||++|.+++-.....+.....+.++. ++ .|.+.+.-+..-+-
T Consensus 77 ~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElw 156 (491)
T PF03219_consen 77 ILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELW 156 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999887777666655555542 11 11122222222222
Q ss_pred hhhccc-ccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 63 MGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 63 ~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
...... .-..+..|.++.+|-.|..++...+.++|.++++.+..++
T Consensus 157 gsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 157 GSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 3456778999999999999999999999999998877666
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.69 E-value=0.00064 Score=64.86 Aligned_cols=134 Identities=15% Similarity=0.068 Sum_probs=84.8
Q ss_pred HhHHHHHHHcCCCchhHHHHHH---HHHHHHhhHHHHHHhh-cCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 215 FYASSIFISAGFSGSIGMIAMV---VIQIPMTLLGVLLMDK-SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
.+..++.+..+.+......+.. ...-+..+++|+++|+ +|+++.+..+.++..++..++.+....... +...
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~----~~~~ 84 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG----HPLH 84 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc----cchH
Confidence 3344444556766653333332 3344556788999996 699999988888888888777653211000 0111
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcC---cchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPIN---MKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
....+..+.+...+..+.-|...+...|.++++ .+...+.+.....++|+.+++.+.+++.+
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~ 149 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRG 149 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333444455566666678888888754 36678888888899999999999998875
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.00056 Score=60.38 Aligned_cols=117 Identities=20% Similarity=0.184 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhh--HHHHHHHHHHHHhhcc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPF--LALVGVLVYTGSFSLG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 307 (396)
+.+.++.+..++..+.+-|+.||+|-|....++....+++..+=.......- +...+ ....+-.+ .......
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v-----~~~f~~~l~~~Gq~i-aa~Aq~F 156 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFV-----PPLFRRPLTHTGQSI-AAAAQPF 156 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccc-----cccchhhhhHHhHHH-HHHhhhH
Confidence 7778888899999999999999999999999998888888877665422100 01111 11122111 1111111
Q ss_pred ccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 308 MGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 308 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
...+..-...--+|+++|+++..+....+.+|.+++..+.+.+..
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 112222334445899999999999999999999998888777765
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.51 E-value=0.00054 Score=62.51 Aligned_cols=153 Identities=20% Similarity=0.138 Sum_probs=89.2
Q ss_pred HHHHHHcCCCchhHHHHHHHHHHHH--hhHHHHHHhhcC-----CcceeeecchHHHHHHHHHHHHHHHHhhhhcccchh
Q 016055 218 SSIFISAGFSGSIGMIAMVVIQIPM--TLLGVLLMDKSG-----RRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATP 290 (396)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~l~d~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (396)
+++.++.+.++........+..++- .++.|.++|-+. ||..+.++.++..++...+..... . ...
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~-~-------~~s 85 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA-S-------ESS 85 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc-c-------cch
Confidence 3455668999887777766666654 569999999863 444455555555444444443210 0 111
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccC---CcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHH
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVF---PINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAIC 366 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 366 (396)
........++............-+...|.. |.+ ++...+.......+|+.++..+.|.+.+ .+....+.+.+.+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHH
Confidence 111112222222222222233445666665 333 7788888999999999999999999988 55555566655555
Q ss_pred HhhHhheeeecCC
Q 016055 367 SLTVLFVAKLVPE 379 (396)
Q Consensus 367 ~~~~~~~~~~~~~ 379 (396)
.+..+......+|
T Consensus 165 ~l~~~~~~~~~~e 177 (433)
T PF03092_consen 165 LLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHhhhh
Confidence 5554444444554
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.47 E-value=0.062 Score=48.51 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=65.8
Q ss_pred hhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh---------ch----------h-------------hHHHHHHHH
Q 016055 11 SNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS---------KA----------A-------------WWLDLGRLL 58 (396)
Q Consensus 11 ~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~---------~~----------~-------------~~l~~~r~l 58 (396)
+..++.+++.+++.|.+++-.-+..+....+++++. ++ . |...+.-..
T Consensus 77 if~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~ 156 (509)
T COG3202 77 IFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIM 156 (509)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHH
Confidence 444568999999999999988887777777777653 11 0 111111121
Q ss_pred HHhhhhhccc-ccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 59 VGYGMGLLSY-VVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 59 ~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
.=+-...... .-.....|.++.+|-.|..++++.+.+++..++..+..++
T Consensus 157 aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 157 AELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 2334557888888889999999999999999999888877
No 269
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=97.47 E-value=2.6e-05 Score=67.65 Aligned_cols=117 Identities=10% Similarity=-0.040 Sum_probs=2.7
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcc--cchhhHHHHHHHHHHHHhhcc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWI--KATPFLALVGVLVYTGSFSLG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 307 (396)
.......++..+|+.+..+..-+..+++.+.+..+.=.+..-++...-..+.....+ -.+.+.. +...++.+...+-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~-~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWF-IILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHH-HHHHHHHHHccch
Confidence 345567789999998887643221123333232222222222222221111100000 0112222 2223333333444
Q ss_pred ccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh
Q 016055 308 MGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF 347 (396)
Q Consensus 308 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 347 (396)
..+....+..+..++++|..+-.++...-.+|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566678888889988888888877777777777776553
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.42 E-value=0.0054 Score=46.80 Aligned_cols=109 Identities=7% Similarity=-0.045 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
....+......+..++.+.+.+++|.|+.+.++.+...+-...... .+...++....+.+.......
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------------~~~~~l~~~s~l~G~~~a~lW 107 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------------PNSYTLYPASALLGFGAALLW 107 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHhhhhHHhh
Confidence 4445555667777888999999999999888777666544433322 223444444445555555555
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
...-.++.+...++.+++-.++...+.+.+..+|..+.-.+.
T Consensus 108 ~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 108 TAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555578888888899999999999998888888877665443
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.08 E-value=0.0091 Score=52.64 Aligned_cols=84 Identities=11% Similarity=0.016 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHh---hhh------hHHHHHHHhh
Q 016055 48 AAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIG---AFL------NWRILALIGT 118 (396)
Q Consensus 48 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~---~~l------~wr~~f~~~~ 118 (396)
.+...++.-.+.+.+.|......+...++ +|++.-.-.+ .|.+++..+...+. ... +=..-|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 45566677788888888888888887776 5555433222 23333333332222 111 2234455566
Q ss_pred HHHHHHHHHHhccCCChh
Q 016055 119 IPCLVQLIGLCFIPESPR 136 (396)
Q Consensus 119 ~~~~~~~~~~~~~~e~p~ 136 (396)
+..+++++....+|+.|-
T Consensus 191 ~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHHHhhcchH
Confidence 666666666667777764
No 272
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.96 E-value=0.0024 Score=42.16 Aligned_cols=54 Identities=20% Similarity=0.192 Sum_probs=40.4
Q ss_pred chhhhHHhHHHHHHHcCCCchhH---HHHHHHHHHHHhhHHHHHHhhcCCcceeeec
Q 016055 209 GVNGIAFYASSIFISAGFSGSIG---MIAMVVIQIPMTLLGVLLMDKSGRRPLLLVS 262 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 262 (396)
......-|.+.+.++.|+++... ..+..+..+++.++.|.++||.++++.....
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 34555667777788899988744 4444578889999999999999988765433
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.66 E-value=0.042 Score=50.35 Aligned_cols=110 Identities=11% Similarity=-0.007 Sum_probs=71.7
Q ss_pred hhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhccc--------ch-----------hhHHHHHHHHHHHH
Q 016055 243 TLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIK--------AT-----------PFLALVGVLVYTGS 303 (396)
Q Consensus 243 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~ 303 (396)
.++.+++++|++|++.+............++.+...+....-.++ .. ..+......+..-.
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 778899999999999877666666655555555433222110000 00 01111122222222
Q ss_pred hhccccc-hhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 304 FSLGMGG-IPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 304 ~~~~~~~-~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
++....+ +.|.+++|...+++..+-.++....+++|..+++.+...+.+
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333 678999999999999999999999999999999999888763
No 274
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.61 E-value=0.023 Score=54.13 Aligned_cols=159 Identities=16% Similarity=0.052 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHH
Q 016055 194 SLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGC 270 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 270 (396)
.++.+..+..+.+......+..-...+-+..+++.. ......-++..+...+..+...|..|-+.+-++.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 344444444444443334444445555556666655 33334446777777788888889889899999999999999
Q ss_pred HHHHHHHHHHhh------h------hc----------------------c----cch--hhHHHHHHHHHHHHhhccccc
Q 016055 271 LLAALSFLFQDL------Q------QW----------------------I----KAT--PFLALVGVLVYTGSFSLGMGG 310 (396)
Q Consensus 271 ~~~~~~~~~~~~------~------~~----------------------~----~~~--~~~~~~~~~~~~~~~~~~~~~ 310 (396)
++..+.-...+. . .. . ..+ .+..++..-++.|.+.....+
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988776322110 0 00 0 011 233455555666666666778
Q ss_pred hhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 311 IPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 311 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
+-.+|+-|...+++.....|+..++..+|-++|-.+++....
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLK 298 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 888999999999999999999999999998888888887764
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.59 E-value=0.00037 Score=65.10 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=1.6
Q ss_pred chhhhHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhh--
Q 016055 209 GVNGIAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQ-- 283 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (396)
.......-.+.+.++.+++.. ......-++.++..++..++.+|..|-+.+-.+.++++++.+++.+.....+..
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 334444455566666777665 445555578888888888899988888888889999999988887654322210
Q ss_pred -h-------------cc-------------------cch---hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchh
Q 016055 284 -Q-------------WI-------------------KAT---PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGS 327 (396)
Q Consensus 284 -~-------------~~-------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 327 (396)
. .. +.. ....++..-++.+.+.....++-.+|+-|.+++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence 0 00 000 12233334444555555566778899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHH
Q 016055 328 AGSLVTLVSWLGSWIISFTFNFLM 351 (396)
Q Consensus 328 ~~g~~~~~~~~g~~~~~~~~g~~~ 351 (396)
..|+......+|-++|-.+++...
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHH
Confidence 999999999888888877776554
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.20 E-value=0.079 Score=45.61 Aligned_cols=114 Identities=27% Similarity=0.243 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhcccc
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMG 309 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (396)
.......+....+.+..|.+.||.|||+.+..+......+.....+.. ..............+.......
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~~~~~ 112 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP----------NVGLALLLILRLLQGLGGGGLL 112 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc----------cchHHHHHHHHHHHHhhhHHHH
Confidence 555555667777779999999999998665555544233322222210 1112223333332444444566
Q ss_pred chhhhhhcccCCc-CcchhhhHHHHH-HHHHHHHHHHHHhHHHHHh
Q 016055 310 GIPWVIMSEVFPI-NMKGSAGSLVTL-VSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 310 ~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~g~~~~~ 353 (396)
+....+..|..|+ +.|+...+.... ...++..++|.+.+.+.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777899999987 678888888888 5777888888777666654
No 277
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.17 E-value=0.074 Score=47.50 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=85.0
Q ss_pred hhhhHHhHHHHHHH-cCCCch----hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhh
Q 016055 210 VNGIAFYASSIFIS-AGFSGS----IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ 284 (396)
Q Consensus 210 ~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (396)
-..-++..|++.+. .+++.. ...-...-..++..+....+.|..+.|++++++.+...+...++.+
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~--------- 90 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF--------- 90 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---------
Confidence 34455666666665 566554 1111122244455667788999999999988888777776666665
Q ss_pred cccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 285 WIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.+....+-.+-++.+.... .-...++++-...|+++..++.+.......+|..++..++-.+..
T Consensus 91 ---~~sv~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 91 ---GTSVLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred ---HCcHHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444344443332 233445777778888888999999999999999999888877776
No 278
>PRK03612 spermidine synthase; Provisional
Probab=96.14 E-value=0.052 Score=50.78 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=40.6
Q ss_pred HHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH--hcccchhHHHHHHHHhhHh
Q 016055 302 GSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK--WSSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~ 371 (396)
++..+...|...-+..+. ..++-+...|-......+|+++|+++.+.+.- .+.....++.+.+.+++++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 344444445543333322 12234667788899999999999999888765 4444455555554444443
No 279
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.87 E-value=0.14 Score=46.44 Aligned_cols=141 Identities=13% Similarity=0.053 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHH----HHHHHHHHhhhhcccchhhHHHHHHHHHHHHh-
Q 016055 230 IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLL----AALSFLFQDLQQWIKATPFLALVGVLVYTGSF- 304 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 304 (396)
.....-.+..++.....|...||..|.+......+..-++... +.......... ..+..............+..
T Consensus 42 iygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 42 IYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS-SQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc-cccchHHHHHHHHHHHHHHHH
Confidence 4445555677777888899999999988776665544333222 22221111100 00011111111111111111
Q ss_pred hcccc----chhhhhhcccC--CcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHh
Q 016055 305 SLGMG----GIPWVIMSEVF--PINMKGSAGSLVTLVSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVL 371 (396)
Q Consensus 305 ~~~~~----~~~~~~~~~~~--p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 371 (396)
..+.. .+---++..+. +++.....++.+.-+-.+...++|.+.|.+.+ .+......+.++...+...
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 11110 11111222223 33445555666666666899999999999988 5544444555555444443
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.84 E-value=0.07 Score=48.47 Aligned_cols=92 Identities=17% Similarity=0.249 Sum_probs=72.6
Q ss_pred HHHhh---hhchhhhHHhhHHHHHHHHHHHHHhh------------------chhhHHHHHHHHHHhhhhhcccccceee
Q 016055 16 FIFWL---PCALWKQTMGFSDIVCIIGWVIIVFS------------------KAAWWLDLGRLLVGYGMGLLSYVVPVYI 74 (396)
Q Consensus 16 ~G~l~---dr~Grk~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i 74 (396)
.+.++ +|+||++.+.++.++..++.++.-.+ +++....+.-++.|++-+......+.++
T Consensus 299 ~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii 378 (461)
T KOG3098|consen 299 FSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVII 378 (461)
T ss_pred HHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 55555 67899999999999998888876543 2455677778999999999999999999
Q ss_pred ecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 75 AEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 75 ~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
.+.. +++|..+.++.-.-..++..++-......
T Consensus 379 ~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 379 ALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999 57788888888887777777665555443
No 281
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=95.71 E-value=0.61 Score=38.14 Aligned_cols=33 Identities=15% Similarity=0.028 Sum_probs=22.8
Q ss_pred HHHHHHhhHHHHHHhhcCCcceeeecchHHHHH
Q 016055 237 VIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLG 269 (396)
Q Consensus 237 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 269 (396)
++..+..+.+-.++.|+..|++...+.++..+.
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 444455555567888999898888777666554
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.29 E-value=0.045 Score=48.73 Aligned_cols=65 Identities=18% Similarity=0.096 Sum_probs=59.2
Q ss_pred HhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 44 VFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 44 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
-+.++.|..++.-+..|+..|..+......+.|-.++++|...++....+-++|..++..++-.+
T Consensus 330 ~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 330 RFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999999999888765
No 283
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.08 E-value=0.027 Score=50.56 Aligned_cols=113 Identities=14% Similarity=0.004 Sum_probs=66.5
Q ss_pred eeeecchHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHhhccccchhhhhhcccCCcC---cchhhhHHHHH
Q 016055 258 LLLVSAAGTCLGCLLAALSFLFQDLQQWIKATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPIN---MKGSAGSLVTL 334 (396)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~ 334 (396)
++.++.++..++.+++.+........ +......+...+.+...+.++.=|...++..|.++++ +|.+.......
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~---~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLP---SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC---------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhh---hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHH
Confidence 34456666777777655543221110 0111223333334455566677777779999999876 35667778888
Q ss_pred HHHHHHHHHHHHhHHHHH-hcccchhHHHHHHHHhhHhhee
Q 016055 335 VSWLGSWIISFTFNFLMK-WSSTGTFFAFSAICSLTVLFVA 374 (396)
Q Consensus 335 ~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 374 (396)
..++|..+++.+.+++.+ .++...|.+.++.. +.+++.+
T Consensus 80 ~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~-~~~~~~f 119 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGM-LLALIVF 119 (372)
T ss_dssp HHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHH-HHHHHHH
T ss_pred HHhhhhHhhcccchhhccccchhhhhhHHHHHH-HHHHHHH
Confidence 899999999999999998 44444444444444 4444433
No 284
>PRK03612 spermidine synthase; Provisional
Probab=94.80 E-value=0.21 Score=46.84 Aligned_cols=55 Identities=18% Similarity=0.108 Sum_probs=36.1
Q ss_pred HHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 53 DLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 53 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
+..-++.++..|+..|....+..+... ++-++..|-......+|.++|.++.+++
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 344566788888888887766654322 2245566667777777777777776665
No 285
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.64 E-value=0.036 Score=49.51 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHHHhcchhhhHHhHHHHHHHcCCCchhHHHHHH---HHHHHHhhHHHHHHhh----cCCcceeee-cch
Q 016055 193 HSLIVGVGLMVLQQFGGVNGIAFYASSIFISAGFSGSIGMIAMV---VIQIPMTLLGVLLMDK----SGRRPLLLV-SAA 264 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~d~----~g~~~~~~~-~~~ 264 (396)
+.++....+....+++ +..-..|.+.+.+..|.+..+...+.. +.+++.+++.|..+|| +||||..+. +..
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 3334444444444443 444556667777788887775555444 4566668899999995 688777654 444
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccch------hhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchh-hhHHHHHHHH
Q 016055 265 GTCLGCLLAALSFLFQDLQQWIKAT------PFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGS-AGSLVTLVSW 337 (396)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~ 337 (396)
...++..++.........-...... ....++..-++-..... .....-++..|+..++++.+ +++....+..
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~-~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNT-LQGPCRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhh-hhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence 4455555555443322211111111 11222233333333322 33344588889887777777 9999999988
Q ss_pred HHHHHHHHHhHH
Q 016055 338 LGSWIISFTFNF 349 (396)
Q Consensus 338 ~g~~~~~~~~g~ 349 (396)
+|+.+|-...++
T Consensus 190 vGnvLGY~~g~y 201 (498)
T KOG0637|consen 190 VGNVLGYALGSY 201 (498)
T ss_pred hcceeeeecccc
Confidence 998888776653
No 286
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.23 E-value=0.063 Score=45.36 Aligned_cols=110 Identities=13% Similarity=0.052 Sum_probs=64.0
Q ss_pred HHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHH
Q 016055 17 IFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICI 96 (396)
Q Consensus 17 G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l 96 (396)
....||+---+=+.+..++.+.+.++.+++++.++-+.+-.+..++.|.....-.++-+ .+++ ...+.+..+.+.
T Consensus 83 Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~----~~i~~WSSGTGg 157 (409)
T KOG3880|consen 83 PFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPS----IVIAGWSSGTGG 157 (409)
T ss_pred hhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cCCC----ceeccccCCCCc
Confidence 44556654322234455667778888899999999999988888888877665554433 2332 223444444444
Q ss_pred HHHHHHHHhhhh------hHHHHHHHhhHHHHHHHHHHhcc
Q 016055 97 GVSMTYLIGAFL------NWRILALIGTIPCLVQLIGLCFI 131 (396)
Q Consensus 97 G~~~~~~l~~~l------~wr~~f~~~~~~~~~~~~~~~~~ 131 (396)
+.++|..--..+ +-|...++...+.++.....+++
T Consensus 158 AGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 158 AGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred chhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 444544322222 45677777655544444444443
No 287
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.89 E-value=0.062 Score=35.49 Aligned_cols=29 Identities=3% Similarity=-0.130 Sum_probs=22.6
Q ss_pred hhhhhhHHHHHhhhhchhhhHHhhHHHHH
Q 016055 8 DLLSNVCFFIFWLPCALWKQTMGFSDIVC 36 (396)
Q Consensus 8 ~~~~~~~~~G~l~dr~Grk~~~~~~~~~~ 36 (396)
.-+++.|++|.++||+++++.++....+.
T Consensus 47 ~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 47 IRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34567889999999999888877765543
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.58 E-value=0.17 Score=33.93 Aligned_cols=49 Identities=4% Similarity=0.015 Sum_probs=42.7
Q ss_pred ccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHH
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLD 53 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~ 53 (396)
...|.++|.+...++.++..+++.+..+.+...+..+.+++.++.+.+.
T Consensus 36 Ny~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 36 NYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 4567888888899999998899999999999999999999998877653
No 289
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.48 E-value=0.6 Score=41.07 Aligned_cols=130 Identities=17% Similarity=0.132 Sum_probs=57.3
Q ss_pred hHHHHHHHcCCCchhHHHHHHHHHHHH--hhHHHHHHh-----hcCCcceeeecchHHHHHHHHHHHHHHHHh-hhhccc
Q 016055 216 YASSIFISAGFSGSIGMIAMVVIQIPM--TLLGVLLMD-----KSGRRPLLLVSAAGTCLGCLLAALSFLFQD-LQQWIK 287 (396)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~l~d-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 287 (396)
-.|.+++..+.+-.. ....++...+- -++...+.| |+||||..++-.- ..++.++..+....+. ......
T Consensus 52 ~iP~lL~ak~vSyt~-~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q-~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTS-QAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ-YLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhh-hhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehH-HHHHHHHHHHhhCCCcccccCCC
Confidence 677777755554331 11122222222 345666777 9999987654432 2233333333221111 110001
Q ss_pred chhhHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHh
Q 016055 288 ATPFLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTF 347 (396)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 347 (396)
.++.......++...+.+..--...-.+......+++-|-+..........|.+++..++
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 112222222222222222222223335555666666666665555555556666555443
No 290
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.71 E-value=6.2 Score=34.25 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=58.0
Q ss_pred chhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 7 SDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 7 ~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
...+.+..+.+.+..++|-|.++.++...+...-.. =+-+.+..++-.-...|++.+..+..--+|+++...
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 455667777889999999999999988877654332 244788889999999999999999999999987654
No 291
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=92.48 E-value=0.51 Score=31.67 Aligned_cols=64 Identities=23% Similarity=0.044 Sum_probs=50.4
Q ss_pred hHHhHHHHHHHcCCCch---hHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHH
Q 016055 213 IAFYASSIFISAGFSGS---IGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALS 276 (396)
Q Consensus 213 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 276 (396)
.+-.+|.+.++.+++.. +......++.++|.+...++.++.++++.+..+.+...+....+.+.
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466888888888876 66666778999999999999998777888888888887777777763
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.36 E-value=1.7 Score=38.88 Aligned_cols=85 Identities=16% Similarity=0.160 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH--hcccchhHHHHHHHHhh
Q 016055 292 LALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK--WSSTGTFFAFSAICSLT 369 (396)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~ 369 (396)
..........+..........+...+ .+|++.....++-.+.++.+.+... .+.....+ ......++..+.+..+.
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G~a~aG~l~Sl~~-i~tka~~~~~~~sA~~yF~~s~~~~ll 195 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQAVMSGQALAGTLTSLLR-ILTKAAFSDSRTSALIYFITSTVILLL 195 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHHHHhcchhHhHHHHHHH-HHHHHhcCCCCceeehhHHHHHHHHHH
Confidence 33333444444444444444445554 4577654443333333333222221 12222222 33344455556555555
Q ss_pred HhheeeecC
Q 016055 370 VLFVAKLVP 378 (396)
Q Consensus 370 ~~~~~~~~~ 378 (396)
+.+++...+
T Consensus 196 C~i~y~~l~ 204 (406)
T KOG1479|consen 196 CFVLYLVLP 204 (406)
T ss_pred HHHHHHHhh
Confidence 555555443
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.48 E-value=8.5 Score=35.93 Aligned_cols=115 Identities=13% Similarity=0.023 Sum_probs=69.8
Q ss_pred HHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhhcccc----------hh--h-------HHHHHHH
Q 016055 238 IQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQWIKA----------TP--F-------LALVGVL 298 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~-------~~~~~~~ 298 (396)
+.++...+..+++++++++++.-...........++++..++....-.++. .. + +......
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344556678899999999887766555555555555554332211000000 00 0 0011111
Q ss_pred HHHHHhhccccc-hhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 299 VYTGSFSLGMGG-IPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 299 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
+..-..+....+ +.|.+++|..+.++..+-.++.....++|..+++.+...+.+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122222222 468999999999999999999999999999999988877776
No 294
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.39 E-value=6.6 Score=37.45 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhhHHHHHHhh-cCCcceeeecchHHHHHHHHHHHHHHHHhhhhc----------ccc-h--hhHHHHHH
Q 016055 232 MIAMVVIQIPMTLLGVLLMDK-SGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQW----------IKA-T--PFLALVGV 297 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~--~~~~~~~~ 297 (396)
............+.+++++|. +||-+++.++..+..++..++..........+. .+. . ....+...
T Consensus 79 v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~ 158 (571)
T KOG1237|consen 79 VNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGA 158 (571)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHH
Confidence 333444555667889999996 488888888888888887776665544432110 011 1 11233333
Q ss_pred HHHHHHhhccccchhhhhhcccCCc----Cc--chhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 298 LVYTGSFSLGMGGIPWVIMSEVFPI----NM--KGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~p~----~~--~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
+-....+.++.-|...++-+|.+++ +. +..-+.......+.|..++-.+.-++.+
T Consensus 159 l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 159 LYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred HHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 3333345566667777888888883 22 2355667777778888888888888866
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.21 E-value=0.73 Score=31.86 Aligned_cols=28 Identities=14% Similarity=-0.174 Sum_probs=17.3
Q ss_pred ccchhhhhhHHHHHhhhhc-hhhhHHhhHH
Q 016055 5 FHSDLLSNVCFFIFWLPCA-LWKQTMGFSD 33 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~-Grk~~~~~~~ 33 (396)
|.+|.+++.. .||+.||| |-++..++..
T Consensus 52 fIsGilVGa~-iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 52 FISGILVGAG-IGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHH-HHHHHHHhcCCCcHHHHHH
Confidence 4566677766 77777776 5555544433
No 296
>PRK15015 carbon starvation protein A; Provisional
Probab=84.49 E-value=35 Score=32.82 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=25.5
Q ss_pred ecccCCCcchhHHHHH-HHHHHHHHHHHHHHhhhhhHH
Q 016055 75 AEITPKNLRGGFTTVH-QLMICIGVSMTYLIGAFLNWR 111 (396)
Q Consensus 75 ~~~~~~~~r~~~~~~~-~~~~~lG~~~~~~l~~~l~wr 111 (396)
.|+.|.+++ ...|-. ....+.|+++||.++..+||-
T Consensus 78 ~DYvPt~k~-VLfGHHFasIAGAGPivGPvlAa~~Gwl 114 (701)
T PRK15015 78 LDYVPTDKK-VLFGHHFAAIAGAGPLVGPVLAAQMGYL 114 (701)
T ss_pred CCcCcCCcc-chhHHHHHHHhccCccHHHHHHHHHcch
Confidence 466666554 444444 555678999999999988886
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.37 E-value=2.2 Score=36.56 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 34 IVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
.++.+......+.++++...+.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344455556677899999999999999987888877776677778889999999999999999999988877654
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.81 E-value=4.2 Score=34.21 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=18.4
Q ss_pred HHHHhhHHHHHHhhcCCcceeeecchH
Q 016055 239 QIPMTLLGVLLMDKSGRRPLLLVSAAG 265 (396)
Q Consensus 239 ~~~~~~~~g~l~d~~g~~~~~~~~~~~ 265 (396)
.++...+.|.+.||.|||+.-..-.+.
T Consensus 85 smLFGtivgSLaDkqGRKracvtycit 111 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCIT 111 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHH
Confidence 344455678899999999865544433
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=79.18 E-value=3.9 Score=34.10 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=51.6
Q ss_pred ccccchhhhhhHHHHHhhh-hchhhhHHh----hHHHHHHHHHHHHHh-hc----hhhHHHHHHHHHHhhhhhcccccce
Q 016055 3 LSFHSDLLSNVCFFIFWLP-CALWKQTMG----FSDIVCIIGWVIIVF-SK----AAWWLDLGRLLVGYGMGLLSYVVPV 72 (396)
Q Consensus 3 ~~~~~~~~~~~~~~G~l~d-r~Grk~~~~----~~~~~~~~~~~~~~~-~~----~~~~l~~~r~l~G~~~~~~~~~~~~ 72 (396)
..|..|..+|....|++.. ++-||+.+. .+++++.++.++... .+ ++..+++.-|+.|+..=+..+....
T Consensus 148 I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~ 227 (267)
T PF07672_consen 148 ILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILN 227 (267)
T ss_pred HHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 4566777777777777775 455666655 345555555555312 21 3566777888888765444443333
Q ss_pred eeecccCCCcchhHHHHHHHHHHHHHHH
Q 016055 73 YIAEITPKNLRGGFTTVHQLMICIGVSM 100 (396)
Q Consensus 73 ~i~~~~~~~~r~~~~~~~~~~~~lG~~~ 100 (396)
.=.| +++.++.+..-.++..+++|.++
T Consensus 228 lPhE-yK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 228 LPHE-YKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred Chhh-hcCCCcceehhHHHHHHHHHHHH
Confidence 3233 32223333333334455555543
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=77.94 E-value=9.6 Score=33.84 Aligned_cols=37 Identities=11% Similarity=-0.067 Sum_probs=28.9
Q ss_pred chhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 016055 310 GIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFT 346 (396)
Q Consensus 310 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 346 (396)
....-...|..|+++|..+.|+-|..+..-..+.-.+
T Consensus 405 lAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il 441 (503)
T KOG2601|consen 405 LAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL 441 (503)
T ss_pred HHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE
Confidence 3344678899999999999999999988776555443
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=76.93 E-value=64 Score=30.04 Aligned_cols=115 Identities=13% Similarity=-0.010 Sum_probs=69.8
Q ss_pred HHHHHhhHHHHHHhhcCCcceeeecchHHHHHHHHHHHHHHHHhhhh---------cccchh------------hHHHHH
Q 016055 238 IQIPMTLLGVLLMDKSGRRPLLLVSAAGTCLGCLLAALSFLFQDLQQ---------WIKATP------------FLALVG 296 (396)
Q Consensus 238 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~------------~~~~~~ 296 (396)
++++..++..++.++..+.++............+++++..++....- +.+..+ |.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 45566777888888888888776666555555555555444211100 000000 111111
Q ss_pred HHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 297 VLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
..+.-........-+.+..+.|....++..+-+++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111111212222556889999999999999999999999999999988888766
No 302
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=73.43 E-value=23 Score=31.17 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHhhccccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 291 FLALVGVLVYTGSFSLGMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
...+.......+...+.-.|+...+...... ......+.....-++|+..+.+..+++.-
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~lll 164 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLLL 164 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHHh
Confidence 3444555555555555666766666655211 11122233333466777777776666543
No 303
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=71.43 E-value=30 Score=32.22 Aligned_cols=38 Identities=16% Similarity=-0.017 Sum_probs=22.0
Q ss_pred hhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHH
Q 016055 313 WVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFL 350 (396)
Q Consensus 313 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~ 350 (396)
-.++.....+++++-+........+.|.+++-.++-.+
T Consensus 140 DGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 140 DGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred ehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 35555666777777665554444556666655554333
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=70.81 E-value=28 Score=26.44 Aligned_cols=81 Identities=7% Similarity=-0.060 Sum_probs=51.7
Q ss_pred HhhhhchhhhHHhhHHHHH------HHHHHHHHh----hchhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHH
Q 016055 18 FWLPCALWKQTMGFSDIVC------IIGWVIIVF----SKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFT 87 (396)
Q Consensus 18 ~l~dr~Grk~~~~~~~~~~------~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 87 (396)
.++||.-||-.+..|.=.. .++..+..- .+++..++..-.+.|+|. ..+.+..++..+++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcc
Confidence 4678887776665544222 111111111 245666777766666654 345667777788888889999
Q ss_pred HHHHHHHHHHHHHH
Q 016055 88 TVHQLMICIGVSMT 101 (396)
Q Consensus 88 ~~~~~~~~lG~~~~ 101 (396)
|+-..-.+++-+.-
T Consensus 133 G~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 133 GWEEFKRNWGRMWE 146 (153)
T ss_pred cHHHHHHhHHHHHH
Confidence 99998888876644
No 305
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.42 E-value=56 Score=31.00 Aligned_cols=26 Identities=12% Similarity=0.163 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcc
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRP 257 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~ 257 (396)
.....+.+.++...++++-+.++.|+
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 33444566666667777777676543
No 306
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=68.72 E-value=61 Score=26.23 Aligned_cols=26 Identities=19% Similarity=0.068 Sum_probs=14.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhH
Q 016055 85 GFTTVHQLMICIGVSMTYLIGAFLNW 110 (396)
Q Consensus 85 ~~~~~~~~~~~lG~~~~~~l~~~l~w 110 (396)
........+..+|.++|..+....+.
T Consensus 166 ~~~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 166 LRYLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444455566666666666655564
No 307
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=66.49 E-value=8.6 Score=27.69 Aligned_cols=13 Identities=15% Similarity=0.031 Sum_probs=8.9
Q ss_pred HHHHhccCCChhH
Q 016055 125 LIGLCFIPESPRW 137 (396)
Q Consensus 125 ~~~~~~~~e~p~~ 137 (396)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5567778887753
No 308
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=65.78 E-value=12 Score=28.46 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=27.5
Q ss_pred cccchhhhhhcccCCcCcchhhhHHHHHHHHHHHHH
Q 016055 307 GMGGIPWVIMSEVFPINMKGSAGSLVTLVSWLGSWI 342 (396)
Q Consensus 307 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 342 (396)
+...+.|...+....++..|+..|+-.+-.+++.+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 333466777788888888999999998888876654
No 309
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=64.21 E-value=27 Score=32.21 Aligned_cols=61 Identities=11% Similarity=0.193 Sum_probs=51.9
Q ss_pred chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhh
Q 016055 47 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAF 107 (396)
Q Consensus 47 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 107 (396)
++-+..++..++.|+..|-....+..+..+..++++|..+..+...+..+|...|..++..
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677789999999999999999999999999999999999998888888888876543
No 310
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.65 E-value=64 Score=22.72 Aligned_cols=31 Identities=13% Similarity=0.300 Sum_probs=25.7
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 322 INMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 322 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
++.++.+.++-...-.+++.+.....|++.|
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD 67 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLD 67 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888888888888999999
No 311
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=51.57 E-value=4 Score=35.54 Aligned_cols=60 Identities=18% Similarity=0.309 Sum_probs=3.8
Q ss_pred chhhHHHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhh
Q 016055 47 KAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGA 106 (396)
Q Consensus 47 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~ 106 (396)
+|-+..++..++.|+..|-....+..+..+..++++|..+..+......+|..+|..++.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp ---------------------HHHH-----------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677778899999999999999999999999999999988888888888888877654
No 312
>COG3462 Predicted membrane protein [Function unknown]
Probab=50.09 E-value=88 Score=22.01 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhCCCcchHHHH
Q 016055 145 IESEAALQRLRGADADISEEA 165 (396)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~ 165 (396)
+.+.+.+++-..+....++|.
T Consensus 88 sRA~eIlkER~AkGEItEEEY 108 (117)
T COG3462 88 SRAEEILKERYAKGEITEEEY 108 (117)
T ss_pred cHHHHHHHHHHhcCCCCHHHH
Confidence 455555555444443333333
No 313
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=47.30 E-value=64 Score=27.14 Aligned_cols=24 Identities=33% Similarity=0.287 Sum_probs=13.1
Q ss_pred HHHHHHHhhHHHHHHHHHHhccCC
Q 016055 110 WRILALIGTIPCLVQLIGLCFIPE 133 (396)
Q Consensus 110 wr~~f~~~~~~~~~~~~~~~~~~e 133 (396)
..+.-+++..+.++...+..+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 444555555666666555555543
No 314
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=46.32 E-value=65 Score=28.64 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=33.3
Q ss_pred hhhhhcccCCcCcchhhhHHHHHHHHHHHHHHHHHhHHHHH
Q 016055 312 PWVIMSEVFPINMKGSAGSLVTLVSWLGSWIISFTFNFLMK 352 (396)
Q Consensus 312 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~~~~ 352 (396)
.++++-+.++++++.++.|-+....-.|...|..+...+..
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 35777778899999999999998888888888877776665
No 315
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.11 E-value=4.8e+02 Score=27.91 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhhh-hHHHHHHHhhHHHHHHHH
Q 016055 94 ICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLI 126 (396)
Q Consensus 94 ~~lG~~~~~~l~~~l-~wr~~f~~~~~~~~~~~~ 126 (396)
.++..++..++-++. +||...++.+...++.+.
T Consensus 791 ~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~ 824 (1228)
T KOG0055|consen 791 QNIAAVIIGIIIAFIYGWRLALVVLATFPLLILS 824 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444443333 999998887776555544
No 316
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=40.82 E-value=2.6e+02 Score=24.79 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=11.4
Q ss_pred chhHHHHHHHHhhHhheeeecC
Q 016055 357 GTFFAFSAICSLTVLFVAKLVP 378 (396)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~ 378 (396)
......+.+..+.+.+.+...+
T Consensus 286 ~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 286 SWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred cHHHHHHHHHHHHHhheEEccC
Confidence 3344555555555665555443
No 317
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=39.95 E-value=37 Score=24.70 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=15.1
Q ss_pred HHHHHHHhhHH-----HHH-HHHHHhccCCChhH
Q 016055 110 WRILALIGTIP-----CLV-QLIGLCFIPESPRW 137 (396)
Q Consensus 110 wr~~f~~~~~~-----~~~-~~~~~~~~~e~p~~ 137 (396)
.|..|++..++ .++ -+++++.+|+.|..
T Consensus 31 VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 31 VRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 46665554332 222 34566778887743
No 318
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=39.26 E-value=92 Score=19.11 Aligned_cols=41 Identities=20% Similarity=0.338 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhh----hhHHHHHHHhhHHHHHHHHHHhccCCCh
Q 016055 95 CIGVSMTYLIGAF----LNWRILALIGTIPCLVQLIGLCFIPESP 135 (396)
Q Consensus 95 ~lG~~~~~~l~~~----l~wr~~f~~~~~~~~~~~~~~~~~~e~p 135 (396)
-+|.+++...+.. .+.+....+..+.+++...+...+|+++
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3444444444333 3777777777777777766666666654
No 319
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=36.43 E-value=77 Score=19.31 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=25.2
Q ss_pred ecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 016055 75 AEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRIL 113 (396)
Q Consensus 75 ~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l~wr~~ 113 (396)
+....+++...+-.+..+....|..-+-.+..+.+||.+
T Consensus 3 ~r~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~TDWklI 41 (56)
T PF08997_consen 3 SRLIGPKYIELAKNWIPSAAAWGAAGGLALVYFTDWKLI 41 (56)
T ss_dssp GGG-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhhhcHHHHHHHHHhchhHHHHhhhhhhheeeecchHhh
Confidence 444556666777777777777776666655555588854
No 320
>COG1422 Predicted membrane protein [Function unknown]
Probab=35.09 E-value=2.4e+02 Score=22.67 Aligned_cols=62 Identities=11% Similarity=0.099 Sum_probs=23.8
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhH-HHHHHHHHHhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 96 IGVSMTYLIGAFLNWRILALIGTI-PCLVQLIGLCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 96 lG~~~~~~l~~~l~wr~~f~~~~~-~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
+...++|.++. .+..+.-++.++ .++..-++..++-|-.+-..-+++-+|-++..++.++.+
T Consensus 33 ln~~f~P~i~~-~~p~lvilV~avi~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~~ 95 (201)
T COG1422 33 LNVVFGPLLSP-LPPHLVILVAAVITGLYITILQKLLIDQEKMKELQKMMKEFQKEFREAQESG 95 (201)
T ss_pred HHHHHhhhccc-cccHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33444444443 233444444333 333334444444443332222333333334444444333
No 321
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=35.08 E-value=85 Score=21.24 Aligned_cols=44 Identities=5% Similarity=0.147 Sum_probs=32.5
Q ss_pred cchhhhhhHHHHHhhhhchh-------hhHHhhHHHHHHHHHHHHHhhchh
Q 016055 6 HSDLLSNVCFFIFWLPCALW-------KQTMGFSDIVCIIGWVIIVFSKAA 49 (396)
Q Consensus 6 ~~~~~~~~~~~G~l~dr~Gr-------k~~~~~~~~~~~~~~~~~~~~~~~ 49 (396)
+++.....+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 28 ~a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 28 WAGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556667778888887765 788888888888888888776543
No 322
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=33.28 E-value=1.2e+02 Score=24.14 Aligned_cols=21 Identities=0% Similarity=-0.119 Sum_probs=17.0
Q ss_pred ccchhhhhhHHHHHhhhhchh
Q 016055 5 FHSDLLSNVCFFIFWLPCALW 25 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Gr 25 (396)
|.-++..+..+.|++.||.-+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 556777788889999999875
No 323
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=33.07 E-value=3.2e+02 Score=23.56 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 52 LDLGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 52 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
--..|.+.|+-. ..+...++++.-.+|++++--..-=...+.+++.++-+++|-.+
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888766 55567888888888865542222222333344445555555555
No 324
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=30.18 E-value=2e+02 Score=20.96 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 33 DIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.++-.+++++.++......---.|.+.+.|..+..+.-.++..|...
T Consensus 39 l~VNi~GsfllG~l~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 39 LLINLTGAFILGLIFGRKFNPFIYALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHccccccHHHHHHHHHH
Confidence 34445566555543322111124555566666666777777777654
No 325
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=30.05 E-value=1e+02 Score=27.83 Aligned_cols=27 Identities=0% Similarity=0.100 Sum_probs=19.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHh
Q 016055 327 SAGSLVTLVSWLGSWIISFTFNFLMKW 353 (396)
Q Consensus 327 ~~~g~~~~~~~~g~~~~~~~~g~~~~~ 353 (396)
...+.....-.....+.|.+.|.+..+
T Consensus 175 ~mnatir~iDq~tn~Lapv~tg~Iitf 201 (503)
T KOG2601|consen 175 NMNATIRGIDQSTNLLAPVITGLIITF 201 (503)
T ss_pred hcchhhhhhhhhhhchhhhhhccccee
Confidence 334555666667888999999988873
No 326
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=29.94 E-value=1.3e+02 Score=22.91 Aligned_cols=23 Identities=0% Similarity=-0.161 Sum_probs=17.5
Q ss_pred ccchhhhhhHHHHHhhhhchhhh
Q 016055 5 FHSDLLSNVCFFIFWLPCALWKQ 27 (396)
Q Consensus 5 ~~~~~~~~~~~~G~l~dr~Grk~ 27 (396)
|..|+.....+.|++.+|..+++
T Consensus 62 yl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 62 YLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 55667777778899999987764
No 327
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=29.93 E-value=1.7e+02 Score=21.97 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=19.3
Q ss_pred eecccCCCcchhHHHHHHHHHHHHHH
Q 016055 74 IAEITPKNLRGGFTTVHQLMICIGVS 99 (396)
Q Consensus 74 i~~~~~~~~r~~~~~~~~~~~~lG~~ 99 (396)
+.|++|++.|....+..........-
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999888877765544433
No 328
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=29.90 E-value=2.4e+02 Score=21.04 Aligned_cols=25 Identities=16% Similarity=-0.044 Sum_probs=15.6
Q ss_pred HHHHHHhhhhhcccccceeeecccC
Q 016055 55 GRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 55 ~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.|.+.+.|..+..+.-.++..|...
T Consensus 71 ~~~~l~tGflGgfTTFSTf~~E~~~ 95 (133)
T PRK14218 71 WRMLLIVGLIGGLTTFSSLMMECLV 95 (133)
T ss_pred HHHHHHHHHhchhccHHHHHHHHHH
Confidence 4445555555666677777777664
No 329
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=29.87 E-value=1.7e+02 Score=19.27 Aligned_cols=63 Identities=13% Similarity=-0.034 Sum_probs=25.9
Q ss_pred hhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCC
Q 016055 19 WLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKN 81 (396)
Q Consensus 19 l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 81 (396)
++++.=+.-+.+.+.+-+.+|.+...+......+.++-++.-+-....+|.-..-=.+|.+++
T Consensus 8 ~ae~l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~r~p~~W~~~~ 70 (76)
T PF06645_consen 8 LAEKLMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYNRHPLKWLPPK 70 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhcCCcccCCCCC
Confidence 344443333333344444444444444444444444444444433333443333334444443
No 330
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=29.67 E-value=40 Score=27.59 Aligned_cols=54 Identities=11% Similarity=0.117 Sum_probs=39.5
Q ss_pred HHHHHHHhhhhhcccccceeeecccCCCcchhHHHHHHHHHHHHHHHHHHHhhhh
Q 016055 54 LGRLLVGYGMGLLSYVVPVYIAEITPKNLRGGFTTVHQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 54 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l 108 (396)
..-.-.|+|+|.....+..-+.+.+| +......++..+..-+....|-.+.-++
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455799999999999888899887 5566777777777666666666655544
No 331
>COG1288 Predicted membrane protein [Function unknown]
Probab=28.79 E-value=2.5e+02 Score=25.84 Aligned_cols=17 Identities=12% Similarity=0.048 Sum_probs=11.8
Q ss_pred hHHHHHHHhhHHHHHHH
Q 016055 109 NWRILALIGTIPCLVQL 125 (396)
Q Consensus 109 ~wr~~f~~~~~~~~~~~ 125 (396)
+||...++......+..
T Consensus 217 ~~Riv~~v~~~~~~i~y 233 (481)
T COG1288 217 GLRIVVWVVFTLISIIY 233 (481)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 89999888666544443
No 332
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=26.79 E-value=85 Score=22.21 Aligned_cols=61 Identities=8% Similarity=-0.044 Sum_probs=35.3
Q ss_pred HHHhhhhchhhhHHhhHHHHHHHHHHHHHhh-chhhHHHHHHHHHHhhhhhcccccceeeec
Q 016055 16 FIFWLPCALWKQTMGFSDIVCIIGWVIIVFS-KAAWWLDLGRLLVGYGMGLLSYVVPVYIAE 76 (396)
Q Consensus 16 ~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 76 (396)
.=+.+|.|.|+...+...+...++..+.+.+ ++.+.=.+--.-.|+|..+..........|
T Consensus 20 ~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E 81 (106)
T COG2076 20 LLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE 81 (106)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4456777777777777777777776666655 334433344445566655544444433333
No 333
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=26.67 E-value=2.5e+02 Score=20.23 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=29.1
Q ss_pred HHHcCCCchhHHHHHHHHHHHHhhHHHHHHhhcCCcceeeecchHH
Q 016055 221 FISAGFSGSIGMIAMVVIQIPMTLLGVLLMDKSGRRPLLLVSAAGT 266 (396)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 266 (396)
....+.++........+...++..++|..+-|..++|-+..+....
T Consensus 29 l~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 29 LYFTSLSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 3344566666666667777888888888877655544444454443
No 334
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=25.83 E-value=2.6e+02 Score=20.59 Aligned_cols=25 Identities=12% Similarity=0.089 Sum_probs=16.3
Q ss_pred HHHHHHhhhhhcccccceeeecccC
Q 016055 55 GRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 55 ~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.|.+.+.|..+..+.-.++..|...
T Consensus 68 ~~~~l~tGf~GgfTTFSTf~~E~~~ 92 (127)
T PRK14200 68 WRQIIGLGFLGALTTFSTFSMDNVL 92 (127)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHH
Confidence 3555566666666777777777664
No 335
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=25.70 E-value=5.5e+02 Score=23.91 Aligned_cols=41 Identities=17% Similarity=-0.049 Sum_probs=29.0
Q ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhH
Q 016055 78 TPKNLRGGFTTVHQLMICIGVSMTYLIGAFLNWRILALIGTI 119 (396)
Q Consensus 78 ~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~l~wr~~f~~~~~ 119 (396)
+.+++.+...++.+++.+.|.+.-|...+.. |-++..+..+
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-Gf~p~lilll 57 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-GLIPILLMLV 57 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcc-hHHHHHHHHH
Confidence 3455678889999999999999888887764 4444444333
No 336
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=25.69 E-value=1.5e+02 Score=18.27 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=16.6
Q ss_pred hHHHHHHHhhHHHHHHHHHHh
Q 016055 109 NWRILALIGTIPCLVQLIGLC 129 (396)
Q Consensus 109 ~wr~~f~~~~~~~~~~~~~~~ 129 (396)
+||...+++++++++.+.++-
T Consensus 4 g~r~~~~~ggfVg~iG~a~Yp 24 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYP 24 (58)
T ss_pred cccchhhHHHHHHHHHHHHhh
Confidence 799998998888888766543
No 337
>COG4769 Predicted membrane protein [Function unknown]
Probab=25.69 E-value=67 Score=24.67 Aligned_cols=40 Identities=20% Similarity=0.029 Sum_probs=28.2
Q ss_pred HHHhhhhchhhhHHhhHHHHHHHHHHHHHhhchhhHHHHHHHHHHh
Q 016055 16 FIFWLPCALWKQTMGFSDIVCIIGWVIIVFSKAAWWLDLGRLLVGY 61 (396)
Q Consensus 16 ~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 61 (396)
.-++..++|+|.+-.+|.- ...++.+|..++++.+++.+-
T Consensus 93 ~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 93 FMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 4556678888877554432 344678899999999998763
No 338
>PRK02237 hypothetical protein; Provisional
Probab=25.53 E-value=87 Score=22.14 Aligned_cols=43 Identities=7% Similarity=0.291 Sum_probs=26.6
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHhh
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVFS 46 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~~ 46 (396)
+|-|-++..++++++..|+.-+-+-=.+|..+..++..+..+.
T Consensus 64 AYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 64 AYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3444556666678888887766666666666666665554443
No 339
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=25.50 E-value=2.5e+02 Score=23.07 Aligned_cols=70 Identities=16% Similarity=0.069 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHhhHHHHHHHHHHhc--cCCChhHHhhcCChHHHHHHHHHHhC
Q 016055 87 TTVHQLMICIGVSMTYLIGAFL-NWRILALIGTIPCLVQLIGLCF--IPESPRWLAKTGKGIESEAALQRLRG 156 (396)
Q Consensus 87 ~~~~~~~~~lG~~~~~~l~~~l-~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~ 156 (396)
..++..+..++.+...++.+++ ++.|.+.+.+++..+....+.+ --|.-.|-...++...+..+++.++.
T Consensus 27 l~~~ml~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 27 LPWLMLGAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 3444444444444444443443 6556666666553333332222 22333444556666666666766644
No 340
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=24.51 E-value=65 Score=22.67 Aligned_cols=42 Identities=12% Similarity=0.260 Sum_probs=27.5
Q ss_pred cccchhhhhhHHHHHhhhhchhhhHHhhHHHHHHHHHHHHHh
Q 016055 4 SFHSDLLSNVCFFIFWLPCALWKQTMGFSDIVCIIGWVIIVF 45 (396)
Q Consensus 4 ~~~~~~~~~~~~~G~l~dr~Grk~~~~~~~~~~~~~~~~~~~ 45 (396)
+|-|-+++.++++++..|+.-+.+-=.+|..++.++..+..+
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 344556666777888888877666666666666666555443
No 341
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=24.25 E-value=5.2e+02 Score=23.10 Aligned_cols=100 Identities=13% Similarity=-0.054 Sum_probs=55.9
Q ss_pred HHHHHhhhhchhhhHHhhHHHHH---HHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccCCCc-chhHHHH
Q 016055 14 CFFIFWLPCALWKQTMGFSDIVC---IIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITPKNL-RGGFTTV 89 (396)
Q Consensus 14 ~~~G~l~dr~Grk~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~ 89 (396)
++.+++.+++|.-+.+..+.++. +--.+....++|......+-.+.|.-.|....-.....-...++|+ +-.+.|+
T Consensus 64 ~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a~Gi 143 (354)
T PF04346_consen 64 PVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLAKGI 143 (354)
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHHHHH
Confidence 35677778889888888877764 3345556677888777777666666555554433333333344343 3344444
Q ss_pred HHH--HHHHHHHHHHHHhhhhhHHHHH
Q 016055 90 HQL--MICIGVSMTYLIGAFLNWRILA 114 (396)
Q Consensus 90 ~~~--~~~lG~~~~~~l~~~l~wr~~f 114 (396)
... ...+|.+++..+.++ ++...+
T Consensus 144 l~GiitIPiG~~vggl~~g~-~~~~il 169 (354)
T PF04346_consen 144 LAGIITIPIGCFVGGLIAGF-DIGMIL 169 (354)
T ss_pred HHHHhhhCHHHHHHHHHHhC-CHHHHH
Confidence 432 233455555554432 444333
No 342
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=24.13 E-value=3.6e+02 Score=21.45 Aligned_cols=26 Identities=31% Similarity=0.459 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcCCcc
Q 016055 232 MIAMVVIQIPMTLLGVLLMDKSGRRP 257 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~g~l~d~~g~~~ 257 (396)
.....+..++++++++++.+|.-+|+
T Consensus 158 ~~~~~~~~~v~a~lG~~lG~kllkKH 183 (186)
T PF09605_consen 158 LIIIIIITFVGALLGALLGKKLLKKH 183 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444566677777777777765553
No 343
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=24.03 E-value=4e+02 Score=21.70 Aligned_cols=30 Identities=10% Similarity=0.073 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhHHHHHHhhcCCcceeeec
Q 016055 233 IAMVVIQIPMTLLGVLLMDKSGRRPLLLVS 262 (396)
Q Consensus 233 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 262 (396)
....+...+.-.+.|.+..|+..++....+
T Consensus 164 ~~s~~~~~~~L~~~G~~~a~~~~~~~~~~~ 193 (213)
T PF01988_consen 164 IASIAVTILALFILGYFKARISGQSWWRSG 193 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 333344555555667777776655444333
No 344
>PRK11588 hypothetical protein; Provisional
Probab=24.03 E-value=3.4e+02 Score=25.72 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=21.3
Q ss_pred HHHhhhhchhhh--HHhhHHHHHHHHHHHHHhhchhhHH
Q 016055 16 FIFWLPCALWKQ--TMGFSDIVCIIGWVIIVFSKAAWWL 52 (396)
Q Consensus 16 ~G~l~dr~Grk~--~~~~~~~~~~~~~~~~~~~~~~~~l 52 (396)
.+++.+|++.|. .+...+++++++....+.++....+
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f 174 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAF 174 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 367788887553 3344555666666666665544333
No 345
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=24.02 E-value=3.5e+02 Score=21.09 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=16.0
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeeecc
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLVSA 263 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 263 (396)
.+...+.-.+.|++.-|++.++...-+.
T Consensus 123 ~~~~~~~L~ilG~~~a~~s~~~~~~s~l 150 (169)
T TIGR00267 123 VLLTLIALLVLGVYLGRISRENILISSL 150 (169)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3444555556777777776655543333
No 346
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=23.86 E-value=1.8e+02 Score=21.83 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=18.1
Q ss_pred eecccCCCcchhHHHHHHHHHHHH
Q 016055 74 IAEITPKNLRGGFTTVHQLMICIG 97 (396)
Q Consensus 74 i~~~~~~~~r~~~~~~~~~~~~lG 97 (396)
+.|++|+..|....+.........
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 578999999998887776555443
No 347
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.43 E-value=2.7e+02 Score=19.54 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 016055 90 HQLMICIGVSMTYLIGAFL 108 (396)
Q Consensus 90 ~~~~~~lG~~~~~~l~~~l 108 (396)
......+..++|..+|.++
T Consensus 48 IG~~~v~pil~G~~lG~WL 66 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWL 66 (100)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444555666666666
No 348
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=22.41 E-value=2.9e+02 Score=20.12 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHHHHHHhhhhhcccccceeeecccC
Q 016055 32 SDIVCIIGWVIIVFSKAAWWLDLGRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
..++-.+++++.++......---.|.+.+.|..+..+.-.++..|...
T Consensus 36 Tl~VN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 83 (120)
T PRK14232 36 TFIINITGAILLGIVSSSNISKNMYLLLGDGFLGAYTTFSTFMYEGFN 83 (120)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 344455666665543211100113444555555666677777777765
No 349
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=22.30 E-value=1.5e+02 Score=18.40 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=15.8
Q ss_pred hHHHHHHHhhHHH----HHHHHHHhccCCCh
Q 016055 109 NWRILALIGTIPC----LVQLIGLCFIPESP 135 (396)
Q Consensus 109 ~wr~~f~~~~~~~----~~~~~~~~~~~e~p 135 (396)
-+|..|.+..+.. ++-+++++.+|+.|
T Consensus 30 ~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 30 LVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 3577776655532 22345666788876
No 350
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=22.26 E-value=3.3e+02 Score=20.28 Aligned_cols=25 Identities=8% Similarity=-0.129 Sum_probs=16.2
Q ss_pred HHHHHHhhhhhcccccceeeecccC
Q 016055 55 GRLLVGYGMGLLSYVVPVYIAEITP 79 (396)
Q Consensus 55 ~r~l~G~~~~~~~~~~~~~i~~~~~ 79 (396)
.|.+.+.|..+..+.-.++..|...
T Consensus 69 ~~~~l~tGf~GgfTTFSTf~~E~~~ 93 (133)
T PRK14233 69 FHEFIMVGLLGGYTTVSSFCLQSVN 93 (133)
T ss_pred HHHHHHHHHccccccHHHHHHHHHH
Confidence 3445566666666777777777754
No 351
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=22.05 E-value=2.7e+02 Score=19.00 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=18.0
Q ss_pred chhhhHHhHHHHHHHcCC-CchhHHHHHHHHHHHHhh
Q 016055 209 GVNGIAFYASSIFISAGF-SGSIGMIAMVVIQIPMTL 244 (396)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (396)
++.....+.|..+...-. +.-....+.+++.++...
T Consensus 31 ~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~ 67 (91)
T PF04341_consen 31 GFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAW 67 (91)
T ss_pred HHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHH
Confidence 455666677777665433 222333444444444443
No 352
>PRK09609 hypothetical protein; Provisional
Probab=21.36 E-value=5.6e+02 Score=22.42 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHhh
Q 016055 91 QLMICIGVSMTYLIGA 106 (396)
Q Consensus 91 ~~~~~lG~~~~~~l~~ 106 (396)
-.+.-.|+..|...|.
T Consensus 49 I~G~LFGPv~G~ivG~ 64 (312)
T PRK09609 49 ITGFIFGPIVGFFTGL 64 (312)
T ss_pred HHHHHhchHHHHHHHH
Confidence 3344445554444443
No 353
>TIGR00930 2a30 K-Cl cotransporter.
Probab=21.14 E-value=7.3e+02 Score=26.01 Aligned_cols=24 Identities=21% Similarity=0.378 Sum_probs=11.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhH
Q 016055 96 IGVSMTYLIGAFLNWRILALIGTI 119 (396)
Q Consensus 96 lG~~~~~~l~~~l~wr~~f~~~~~ 119 (396)
+|.++...+...++|....+..++
T Consensus 505 lG~l~c~~lmf~i~w~~ali~~~i 528 (953)
T TIGR00930 505 LGASLCCAIMFLISWWAALVAMVI 528 (953)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444333334478655443333
No 354
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.49 E-value=5.7e+02 Score=22.90 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=18.3
Q ss_pred HHHHHHHhhHHHHHHhhcCCcceeee
Q 016055 236 VVIQIPMTLLGVLLMDKSGRRPLLLV 261 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d~~g~~~~~~~ 261 (396)
...-+..+++.+.+.+++|-|.++.+
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~l 93 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVL 93 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34455556666689999999987643
No 355
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=20.28 E-value=3.9e+02 Score=20.17 Aligned_cols=31 Identities=3% Similarity=0.114 Sum_probs=15.6
Q ss_pred HhccCCChhHHhhcCChHHHHHHHHHHhCCC
Q 016055 128 LCFIPESPRWLAKTGKGIESEAALQRLRGAD 158 (396)
Q Consensus 128 ~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~ 158 (396)
|..+-++.+|...+.+.|++.+.+++..+.+
T Consensus 27 WvlvYRt~~Yk~LKa~vdK~sKKLE~~K~~~ 57 (186)
T KOG3312|consen 27 WVLVYRTDKYKRLKAEVDKQSKKLEKKKEEN 57 (186)
T ss_pred EEEEEehhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3444555555555555555555555444443
No 356
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.00 E-value=7.2e+02 Score=23.19 Aligned_cols=16 Identities=6% Similarity=0.081 Sum_probs=7.8
Q ss_pred HHHHHHHhhHHHHHHh
Q 016055 236 VVIQIPMTLLGVLLMD 251 (396)
Q Consensus 236 ~~~~~~~~~~~g~l~d 251 (396)
-+.....+++.|+.+.
T Consensus 333 I~vYAlTs~i~GY~~g 348 (593)
T KOG1277|consen 333 IVVYALTSPINGYVSG 348 (593)
T ss_pred HHHHHhcccccccccc
Confidence 3444455555555443
Done!