BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016058
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 166/407 (40%), Gaps = 49/407 (12%)
Query: 14 IVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWW 73
++QV++I++ G A+ LL +++ ++ + +FTP L+F+ LAK++++ +I
Sbjct: 18 VLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFSKLAKSLSMAKIFEIA 75
Query: 74 FMPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNL-------LLIIVPA 126
+P+ +T I I G I+ ++L V+A GN +L L +P
Sbjct: 76 IIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNSLPVSLTLSLAYTLPN 135
Query: 127 ICHEQGSPFGNRDVCSSVGLSYKALAQ-------------------AAEPEEVPKEVNKD 167
+ +Q P NRD +S G+ Y + Q + +P
Sbjct: 136 LTWDQ-IPNDNRDNVASRGILYLLIFQQIGQMLRWSWGYNKLMKWSGENTQHMPP----- 189
Query: 168 FDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFL 227
+ Q+ L R D E++ + + E + + + W++S
Sbjct: 190 --SQVQSLLERTPNIDNEELVNEEQEEQELLEEENNRMNSSFLSSSSIGDKIWQKSCTVF 247
Query: 228 HQLLEELLAPPTLAAIVGFIFGAVVWL-RNLIIGDSAPLRVIQDSIEILGDGTIPCITLI 286
++ L PP + I + A+ L R L + D +++ LG +IP I ++
Sbjct: 248 ERIRAN-LNPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGSVSIPLILVV 306
Query: 287 LGGNLIQGL--------RSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPL 338
LG NL S L II ++ LP I + V + + DP+
Sbjct: 307 LGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYINVS---ILDDPI 363
Query: 339 YHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 385
+ V + PPA+ + +TQL + + E + + W Y V +L ++
Sbjct: 364 FLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVS 410
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/417 (18%), Positives = 164/417 (39%), Gaps = 61/417 (14%)
Query: 15 VQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWF 74
++V++I++ G ++A + L DA++ ++ + FTP L+F + + L+ +I
Sbjct: 24 LEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSL 81
Query: 75 MPVNVAMTFLIGGILGWIVVKLLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQGS- 133
+PV + ++ +++ KL R P A N +L L +V ++
Sbjct: 82 LPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDL 141
Query: 134 -----PFGNRDVCSSVGL-----------------SYKALAQAAEPEE-VP--------- 161
P D +S G+ Y+ L +PE+ +P
Sbjct: 142 LWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQPEDPLPIGNRSWSHS 201
Query: 162 ----KEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKE 217
+E+ ++A ++ + E +V S+ S + Q+ + S+ +
Sbjct: 202 DVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQV---ETSNEEVGGF 258
Query: 218 SFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLR-VIQDSIEILG 276
+ LL + +PP + + V L+ + + + I I + G
Sbjct: 259 GAASSKISKFIVLLLDFFSPPLYSLFIALFIAVVPPLQRFFFEEGSFVEGSITSGIRMAG 318
Query: 277 DGTIPCITLILGGNL---------IQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAA 327
+P I ++LG +L Q +R + +II+ ++ R + +P ++ A
Sbjct: 319 QVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLG-RMVVVPLA---LLPAF 374
Query: 328 AALGFLP-----SDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLV 379
+ L + DP++ V+ + P A+ + + QL V + EC+ + W+Y V
Sbjct: 375 SLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYAV 431
>sp|P53932|YNJ5_YEAST Uncharacterized transporter YNL095C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNL095C PE=1 SV=1
Length = 642
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 9 VASMPIVQVLLISVLGALMATQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEE 68
V+ PI+++ LI +G LMA +LT +A R ++ +V TV PSL F + + ++
Sbjct: 12 VSVKPIIKIYLIIGVGFLMAKM--GILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKD 69
Query: 69 IISWWFMPVNVAMTFLIGGILGWIVVKLLRPKPH 102
I S + ++ + F G + VV+L P P
Sbjct: 70 IKSVGIICLSALLIFGSGFFFAY-VVRLFLPVPK 102
>sp|P54072|YL152_YEAST Uncharacterized transporter YLR152C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YLR152C PE=1 SV=1
Length = 576
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 28/264 (10%)
Query: 142 SSVGLSYKALAQAAEPEEVPKEVNKDFDANAQTQLLR--GTTDDQEDVSVLVASTKSSSD 199
+S G SY+ +A E + K + + L R T++ + + + +
Sbjct: 296 NSDGRSYRRKRKADMNELISKYSAAEKIRQGELDLSRPLSLTEEVGSRNASIGNVHTGYT 355
Query: 200 PECQIIVPQASHLQTRKE---SFW--KRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWL 254
E I +++ T SF+ + +L++L + L P +L AI+G I + W+
Sbjct: 356 DESSIEEENCTNMATDGRGSLSFFIERHNLKWLQYFIINCLRPASLGAILGIICALIPWV 415
Query: 255 RNLIIG---------DSAP-LRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 304
+ + D P L + D E +G+ +P L+LGG L + L +L P
Sbjct: 416 KACFVTTYVHVHKAPDGEPVLNFLMDFTEYIGNACVPLGLLLLGGTLAR-LEIKSLPPGF 474
Query: 305 IIA---VVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQL 361
I + + C R I +P IGV V ++ +L + + + +++ +++P A T
Sbjct: 475 IKSALLMTCFRLIVIPIIGVLWVNKLYSIDWLDTG-IGKFDMILTWSMPSATAQVYFTAF 533
Query: 362 F-----DVAQEEC-SVLFLWTYLV 379
+ D Q C SVLF+ Y +
Sbjct: 534 YTPACGDHIQMNCLSVLFVMQYAI 557
>sp|Q58437|Y1031_METJA Uncharacterized transporter MJ1031 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1031 PE=3 SV=1
Length = 308
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 29 TQYWNLLTADARRSLNKMVFTVFTPSLMFASLAKTVTLEEIISWWFMPVNVAMTFLIGGI 88
++ + +L + + LN +V + PS +F +++K V+ +I+ + +PV + + L GI
Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79
Query: 89 LGWIVVK-LLRPKPHLEGLVIATCASGNLGNLLLIIVPAICHEQG 132
L +++ K + + K G +I GN G L + + E+G
Sbjct: 80 LAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEG 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,944,315
Number of Sequences: 539616
Number of extensions: 5526229
Number of successful extensions: 17610
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 17596
Number of HSP's gapped (non-prelim): 24
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)