Query 016059
Match_columns 396
No_of_seqs 172 out of 1301
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:11:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 4.9E-61 1.7E-65 483.9 32.1 326 9-390 3-332 (439)
2 2xr7_A Malonyltransferase; xen 100.0 5.9E-60 2E-64 477.9 29.0 334 14-390 2-348 (453)
3 2e1v_A Acyl transferase; BAHD 100.0 4.7E-59 1.6E-63 471.4 30.3 334 12-390 5-346 (454)
4 2bgh_A Vinorine synthase; VS, 100.0 6.4E-56 2.2E-60 444.3 28.4 308 10-390 1-317 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 4.5E-47 1.5E-51 383.3 23.9 304 45-390 4-334 (451)
6 1q9j_A PAPA5, polyketide synth 98.8 7.1E-07 2.4E-11 87.6 22.5 261 43-356 5-277 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.2 5.3E-05 1.8E-09 76.1 19.2 270 43-375 11-307 (493)
8 2jgp_A Tyrocidine synthetase 3 98.2 0.0002 6.8E-09 72.3 21.5 237 82-372 133-379 (520)
9 1l5a_A Amide synthase, VIBH; n 98.1 0.0004 1.4E-08 68.2 21.6 231 82-366 35-278 (436)
10 2xhg_A Tyrocidine synthetase A 98.0 0.0021 7.3E-08 63.5 24.1 277 43-366 15-309 (466)
11 3fot_A 15-O-acetyltransferase; 97.9 0.00031 1.1E-08 71.2 16.6 263 79-372 72-365 (519)
12 2vsq_A Surfactin synthetase su 97.8 0.00084 2.9E-08 75.6 21.1 242 82-366 49-301 (1304)
13 3cla_A Type III chloramphenico 75.8 2 6.9E-05 37.8 3.7 45 166-210 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 74.7 2.2 7.6E-05 37.7 3.7 44 166-209 171-216 (217)
15 1q23_A Chloramphenicol acetylt 74.1 2.4 8E-05 37.5 3.7 45 167-211 168-214 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 71.3 2.8 9.6E-05 37.5 3.6 30 182-211 204-233 (239)
17 3rqc_A Probable lipoamide acyl 71.2 2.5 8.7E-05 37.5 3.2 30 182-211 187-216 (224)
18 1dpb_A Dihydrolipoyl-transacet 70.5 3.1 0.00011 37.4 3.7 30 182-211 208-237 (243)
19 1scz_A E2, dihydrolipoamide su 70.4 3.2 0.00011 37.0 3.7 30 182-211 196-225 (233)
20 2ii3_A Lipoamide acyltransfera 69.0 3.5 0.00012 37.5 3.7 30 182-211 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 63.5 5.2 0.00018 36.2 3.7 30 182-211 210-239 (256)
22 2kl8_A OR15; structural genomi 63.3 5.3 0.00018 27.7 2.7 36 81-116 11-46 (85)
23 3l60_A Branched-chain alpha-ke 62.1 5.8 0.0002 35.8 3.7 30 182-211 205-234 (250)
24 4hhu_A OR280; engineered prote 50.3 15 0.00052 28.7 3.7 36 81-116 93-128 (170)
25 2xl1_A Arginine attenuator pep 49.0 12 0.00042 20.2 2.1 20 310-329 5-24 (26)
26 4hhu_A OR280; engineered prote 47.1 15 0.00052 28.7 3.3 35 82-116 13-47 (170)
27 3dva_I Dihydrolipoyllysine-res 43.2 5 0.00017 39.2 0.0 30 182-211 391-420 (428)
28 1x93_A Hypothetical protein HP 30.9 70 0.0024 20.7 3.9 22 280-301 3-24 (55)
29 2k1o_A Putative; repressor, tr 21.4 1.7E+02 0.006 19.6 4.6 25 277-301 14-38 (66)
30 2xt6_A 2-oxoglutarate decarbox 21.1 54 0.0019 36.0 3.4 30 182-211 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=4.9e-61 Score=483.88 Aligned_cols=326 Identities=24% Similarity=0.330 Sum_probs=261.5
Q ss_pred CCCCceEEEEeeeecCCCCCCccccccccccccccccccCCccccccccccceeEEEEeecCCCCccchhhhHHHHHHHH
Q 016059 9 GINNRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLS 88 (396)
Q Consensus 9 ~~~~~v~v~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~s 88 (396)
++.|+|+|+++++|+|+.|++ .+.++||+||+.+.. .|++.+|||+.++ .. . ...+++||+|
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp-------------~~~~~LS~lD~~~~~-~~~~~~~~y~~~~-~~-~--~~~~~~Lk~s 64 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETP-------------GRNLWNSNVDLVVPN-FHTPSVYFYRPTG-SS-N--FFDAKVLKDA 64 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCC-------------CCEECCCHHHHSCCT-TCCCEEEEECCCS-CT-T--TTCHHHHHHH
T ss_pred CCceEEEEeeeEEEeCCCCCC-------------CCeecCChhHhCccc-cceeeEEEEcCCC-Cc-c--ccHHHHHHHH
Confidence 356899999999999999886 678999999998644 5899999998754 32 1 2468999999
Q ss_pred HHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCCceEEEEEeecCCccccccCCCcCccccCCCCCCCCCCC--CC
Q 016059 89 LSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSD--DK 166 (396)
Q Consensus 89 L~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~--~~ 166 (396)
|+++|++||||||||+.+++ |+++|+| +++||.|++|+++++++|+.. .. +...+++|+|..+... .+
T Consensus 65 Ls~~L~~f~plAGRl~~~~~-g~~~i~c-------~~~Gv~fv~A~~d~~l~~l~~-~~-p~~~~~~l~p~~~~~~~~~~ 134 (439)
T 4g22_A 65 LSRALVPFYPMAGRLKRDED-GRIEIEC-------NGEGVLFVEAESDGVVDDFGD-FA-PTLELRRLIPAVDYSQGISS 134 (439)
T ss_dssp HHHHTTTTGGGGCEEEECTT-SCEEEEC-------CCCCEEEEEEEESSCGGGGTT-CC-CCGGGGGGSCCCCTTSCTTS
T ss_pred HHHHHhhccccceeeeeCCC-CCEEEEE-------CCCCCEEEEEEcCCcHHHhcC-CC-CCHHHHhcCCCCCccccccc
Confidence 99999999999999998876 8999999 689999999999999999953 21 3345677888765432 46
Q ss_pred CcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccccccC--CCCCCch
Q 016059 167 AEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDRTLIK--DPGGIDL 244 (396)
Q Consensus 167 ~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~dr~~l~--~p~~~~~ 244 (396)
.|++.||||+|+|||++||+++||.++||.|+.+||++||++|||.. ....|++||+.+. +|+....
T Consensus 135 ~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~-----------~~~~P~~dr~~l~~~~pp~~~~ 203 (439)
T 4g22_A 135 YALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD-----------VTLPPFIDRTLLRARDPPQPQF 203 (439)
T ss_dssp SCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTCC-----------CSSCCBCCGGGGCCCSSCCCSS
T ss_pred CceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCCC-----------CCCCCccccccccCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999843 1356899999876 3443321
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHHH
Q 016059 245 VYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVY 324 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW 324 (396)
. +.++.+.+... ......+..+ ..++++++|+|++++|++||+++.... +..++|+||+|+||+|
T Consensus 204 ~-~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~f~fs~~~i~~LK~~a~~~~-------~~~~~St~dal~A~iW 268 (439)
T 4g22_A 204 Q-HIEYQPPPALA------VSPQTAASDS-VPETAVSIFKLTREQISALKAKSKEDG-------NTISYSSYEMLAGHVW 268 (439)
T ss_dssp C-CGGGSCCC----------------------CEEEEEEEECHHHHHHHHHGGGGGG-------CCCCCCHHHHHHHHHH
T ss_pred C-cccccCCCCCc------ccccccccCC-cccceEEEEEECHHHHHHHHHHhhccC-------CCCCccHHHHHHHHHH
Confidence 1 12332211100 0000000100 146889999999999999999987643 2357999999999999
Q ss_pred HHHHhhccCCCCceEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehhhhcccCcHHHHHHhc
Q 016059 325 ACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFVEKLS 390 (396)
Q Consensus 325 ~~~~rAr~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~A~~~ 390 (396)
+|++|||+.++++.+++.++||+|+|++||+|++|+||++.. +.+.++++||++ ++|+++|.++
T Consensus 269 r~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~-~~~~~~~~el~~-~~L~~~A~~I 332 (439)
T 4g22_A 269 RCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFT-ATPIAIAGDLEF-KPVWYAASKI 332 (439)
T ss_dssp HHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEE-ECCEEEHHHHHH-SCHHHHHHHH
T ss_pred HHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeeh-hhcceEHHHHhh-CcHHHHHHHH
Confidence 999999998888999999999999999999999999999999 999999999998 8999999876
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.9e-60 Score=477.89 Aligned_cols=334 Identities=36% Similarity=0.650 Sum_probs=264.7
Q ss_pred eEEEEeeeecCCCCCCccccccccccccccccccCCccccccccccceeEEEEeecCCCCccchhhhHHHHHHHHHHHhh
Q 016059 14 VKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTL 93 (396)
Q Consensus 14 v~v~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~~L 93 (396)
|+|+++++|+|+.|++ +.+.++||+||+.+.+++|++.+|||+.++ ..++|.++++++||+||+++|
T Consensus 2 v~v~~~~~V~P~~~~~------------~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L 68 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSA------------TELTLPLTYFDHVWLAFHRMRRILFYKLPI-SRPDFVQTIIPTLKDSLSLTL 68 (453)
T ss_dssp CEEEEESCCCCCTTCC------------SEEEEECCHHHHGGGGSCCEEEEEEEECCC-CSHHHHHTHHHHHHHHHHHHH
T ss_pred eEEEEEEEecCCCCCC------------CCceECCCHHHhhhhhcCCccEEEEEeCCC-CCchhHHHHHHHHHHHHHHHh
Confidence 8999999999998754 378999999999866666899999998754 322234567999999999999
Q ss_pred hhccCCCcEEeCCCC-CCCcEEEEeCCCCCCCCCceEEEEEeecCCccccccCCCcCccccCCCCCCCCCCCCC-----C
Q 016059 94 LHYLPLAGHLMWPPH-AEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSDDK-----A 167 (396)
Q Consensus 94 ~~~p~LAGrl~~~~~-~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~-----~ 167 (396)
++||||||||+.+++ +|+++|+|| +++||.|++++++.+++++..+.+.+...+..|+|..+..... .
T Consensus 69 ~~~~plAGRl~~~~~~~g~~~i~c~------~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 142 (453)
T 2xr7_A 69 KYYLPLAGNVACPQDWSGYPELRYV------TGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLA 142 (453)
T ss_dssp TTSGGGGSCCEEESSTTCCCEEEEE------TTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEEC
T ss_pred hhccccCeeEEccCCCCCCEEEEec------CCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccC
Confidence 999999999998753 589999994 3599999999999999998654333455667788875433223 8
Q ss_pred cEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHh-cccccccCCCCCCCCCCCCcccccccCCCCCCchHH
Q 016059 168 EVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCK-QLDIHLQNKAPSLPERLTPCFDRTLIKDPGGIDLVY 246 (396)
Q Consensus 168 Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~r-g~~~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~~~~ 246 (396)
|++.||||+|+|||++||+++||.++||.|+.+||++||++|| |... ...++.+.|++||+.+.+|+.+...+
T Consensus 143 pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~------~~~~~~~~P~~dr~~l~~p~~~~~~~ 216 (453)
T 2xr7_A 143 PVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDE------QFLANEFIPFYDRSVIKDPNGVGMSI 216 (453)
T ss_dssp CCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCG------GGSCGGGSCBCCCSSSCCSSCHHHHT
T ss_pred CeEEEEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCc------ccCCCCCCCccccccccCCCCcchHH
Confidence 9999999999999999999999999999999999999999999 6411 00122356899999888665433221
Q ss_pred HHhhhhccCCCCCCCCC-CCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHHHH
Q 016059 247 VKHNMAFAGLDPNTRNL-KPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYA 325 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW~ 325 (396)
...+...+ .. .... ...+ .+.++++|+|++++|++||+++..... ...++|+||+|+||+|+
T Consensus 217 ~~~~~~~~-------~~~~~~~--~~~~--~~~~~~~f~f~~~~i~~Lk~~a~~~~~------~~~~~St~~~l~A~lW~ 279 (453)
T 2xr7_A 217 WNEMKKYK-------HMMKMSD--VVTP--PDKVRGTFIITRHDIGKLKNLVLTRRP------KLTHVTSFTVTCAYVWT 279 (453)
T ss_dssp TTTGGGCT-------TTSCCSC--CCCC--CSCCCEEEEECHHHHHHHHHHHHHHSC------CCSCCCHHHHHHHHHHH
T ss_pred HHhccccC-------Ccccccc--ccCC--CCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHHHH
Confidence 11111100 00 0000 0012 456789999999999999999986531 12589999999999999
Q ss_pred HHHhhccC-----CCCceEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehhhhcccCcHHHHHHhc
Q 016059 326 CMVKAITE-----DANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFVEKLS 390 (396)
Q Consensus 326 ~~~rAr~~-----~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~A~~~ 390 (396)
|+++||.. ++++.+.+.++||+|+|++||+|.+|+||++.. +.+.++++||+++++|+++|+++
T Consensus 280 ~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~-~~~~~~~~el~~~~~l~~~a~~I 348 (453)
T 2xr7_A 280 CIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVG-YVARTRQVDLAGKEGFTIAVELI 348 (453)
T ss_dssp HHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCE-EEEEEEHHHHTSSSHHHHHHHHH
T ss_pred HHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeee-eeeeeeHHHhcCcchHHHHHHHH
Confidence 99999975 567899999999999999999999999999999 99999999999547999999876
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.7e-59 Score=471.40 Aligned_cols=334 Identities=34% Similarity=0.601 Sum_probs=259.3
Q ss_pred CceEEEEeeeecCCCCCCccccccccccccccccccCCccccccccccceeEEEEeecCCCCccchhhhHHHHHHHHHHH
Q 016059 12 NRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSL 91 (396)
Q Consensus 12 ~~v~v~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~ 91 (396)
.+|+|+++++|+|+.|++ +.+.++||+||+.+.+++|++.+|||+.++ ..++|.++++++||+||++
T Consensus 5 ~~v~v~~~~~V~P~~~~~------------~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~ 71 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTL------------GDKSLQLTFFDFFWLRSPPINNLFFYELPI-TRSQFTETVVPNIKHSLSI 71 (454)
T ss_dssp -CEEEEEEEEECCCTTSC------------CCEEEECCHHHHTTTTCCCEEEEEEEECCC-CHHHHHHTHHHHHHHHHHH
T ss_pred ceEEEEEEEEEeCCCCCC------------CCceecCchHHhhhhccCCccEEEEEeCCC-CcchhhHHHHHHHHHHHHH
Confidence 579999999999998754 378999999999876666899999998754 3222235679999999999
Q ss_pred hhhhccCCCcEEe-CCCCCCCcEEEEeCCCCCCCCCceEEEEEeecCCccccccCCCcCccccCCCCCCCCCCC-----C
Q 016059 92 TLLHYLPLAGHLM-WPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSD-----D 165 (396)
Q Consensus 92 ~L~~~p~LAGrl~-~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~-----~ 165 (396)
+|++||||||||+ .++++|+++|+|| +++||.|++++++.+++++.++.+.+...+..|+|..+... .
T Consensus 72 ~L~~~~plAGRl~~~~~~~g~~~i~c~------~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 145 (454)
T 2e1v_A 72 TLKHFYPFVGKLVVYPAPTKKPEICYV------EGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCI 145 (454)
T ss_dssp HHTTCGGGGSEEEECSSSSSCCEEEEC------TTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCE
T ss_pred HhhhccccceeeeeccCCCCCEEEEEC------CCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccc
Confidence 9999999999998 6645589999993 35899999999999999986543334445667888754321 2
Q ss_pred CCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHh-ccc-ccccCCCCCCCCCCCCcccccccCCCCCCc
Q 016059 166 KAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCK-QLD-IHLQNKAPSLPERLTPCFDRTLIKDPGGID 243 (396)
Q Consensus 166 ~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~r-g~~-~~~~~~~~~~~~~~~P~~dr~~l~~p~~~~ 243 (396)
+.|++.||||+|+|||++||+++||.++||.|+.+|+++||++|| |.. . ...++.+.|++|| .+.+|+ ++
T Consensus 146 ~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~------~~~~~~~~P~~dr-~l~~p~-~~ 217 (454)
T 2e1v_A 146 KIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDE------SFLANGTRPLYDR-IIKYPM-LD 217 (454)
T ss_dssp EEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCH------HHHHHSCCCBCCC-CCCCHH-HH
T ss_pred cCceEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCcc------ccCCCCCCCcccc-cCCCCC-cc
Confidence 349999999999999999999999999999999999999999999 631 0 0001134689999 776544 32
Q ss_pred hHHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHH
Q 016059 244 LVYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHV 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~i 323 (396)
..+...+.. .. .. ..+.+.....+ .+.++++|+|++++|++||+++..+.. +..++|+||+|+||+
T Consensus 218 ~~~~~~~~~---~~-~~--~~~~~~~~~~~--~~~~~~~f~f~~~~i~~LK~~a~~~~~------~~~~~St~d~l~A~l 283 (454)
T 2e1v_A 218 EAYLKRAKV---ES-FN--EDYVTQSLAGP--SDKLRATFILTRAVINQLKDRVLAQLP------TLEYVSSFTVACAYI 283 (454)
T ss_dssp HHHHHHTTC---TT-HH--HHCCCCCCCCC--CCEEEEEEEECHHHHHHHHHHHHHHCT------TCSCCCHHHHHHHHH
T ss_pred hHHHHhhhc---cc-cc--cccCcccCCCC--CCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHH
Confidence 222212211 00 00 00000000012 467799999999999999999986531 125799999999999
Q ss_pred HHHHHhhccCCCCceEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehhhhcccCcHHHHHHhc
Q 016059 324 YACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFVEKLS 390 (396)
Q Consensus 324 W~~~~rAr~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~A~~~ 390 (396)
|+|+++|| +++.+.+.++||+|+|++||+|.+|+||++.. +++.++++||+++++|+++|.++
T Consensus 284 Wr~~~~Ar---~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~-~~~~~~~~el~~~~~l~~~a~~I 346 (454)
T 2e1v_A 284 WSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGG-CAAIAKTNLLIGKEGFITAAKLI 346 (454)
T ss_dssp HHHHHHHH---CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEE-EEEEEEGGGTSHHHHHHHHHHHH
T ss_pred HHHHhhhc---CCCceEEEEEecchhccCCCCCcccccceeee-EEeecchhhccccccHHHHHHHH
Confidence 99999999 57899999999999999999999999999999 99999999999437999999875
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=6.4e-56 Score=444.30 Aligned_cols=308 Identities=20% Similarity=0.271 Sum_probs=245.0
Q ss_pred CCCceEEEEeeeecCCCCCCccccccccccccccccccCCccccccccccceeEEEEeecCCCCccchhhhHHHHHHHHH
Q 016059 10 INNRVKIHEVCKVPPFSDDSVATTKTTTTAAAAFATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSL 89 (396)
Q Consensus 10 ~~~~v~v~~~~~V~P~~~~~~~~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL 89 (396)
|.|+|+|+++++|+|+.|++. +.+.++||.||+... ..|++.+|||+.++ ......+.++++||+||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~-----------~~~~~~LS~lD~~~~-~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sL 67 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQ-----------SLKCYKISHLDQLLL-TCHIPFILFYPNPL-DSNLDPAQTSQHLKQSL 67 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCT-----------TSCCCBCCHHHHTSC-SSEEEEEEEECCCS-SCCCCHHHHHHHHHHHH
T ss_pred CCceEEEeeeEEEeCCCCCCC-----------CCcccCCChHHhccc-ccccceEEEEeCCC-ccccchhhHHHHHHHHH
Confidence 347899999999999988862 256899999999754 46999999998754 21000346899999999
Q ss_pred HHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCCceEEEEEeecCCccccccCCCcCccccCCCCCCCCCC-----C
Q 016059 90 SLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTS-----D 164 (396)
Q Consensus 90 ~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~-----~ 164 (396)
+++|++||||||||+ ++++|+| +++||.|++++++++++++....| +...++.|+|..... .
T Consensus 68 s~~L~~~~plAGRl~-----~~~~i~c-------~~~Gv~fv~A~~d~~l~~~~~~~p-~~~~~~~l~p~~~~~~~~~~~ 134 (421)
T 2bgh_A 68 SKVLTHFYPLAGRIN-----VNSSVDC-------NDSGVPFVEARVQAQLSQAIQNVV-ELEKLDQYLPSAAYPGGKIEV 134 (421)
T ss_dssp HHHTTTSGGGGSEEE-----TTTEEEC-------CCCCEEEEEEEESSCHHHHHSCCS-SGGGGGGGSSSCSSSSSSSCC
T ss_pred HHHhhhcchhccccC-----CCcEEEE-------cCCceEEEEEEEcCCHHHHhccCC-ChHHHHhcCCCCCCccccccc
Confidence 999999999999997 2699999 678999999999999999864323 333456677754211 3
Q ss_pred CCCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccc-cccCCC-CCC
Q 016059 165 DKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDR-TLIKDP-GGI 242 (396)
Q Consensus 165 ~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~dr-~~l~~p-~~~ 242 (396)
.+.|++.+|||+|+|||++||+++||.++||.|+.+|+++||++|||... + +.|++|| ..+..+ ...
T Consensus 135 ~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~---------~--~~P~~dr~~~l~p~~~~~ 203 (421)
T 2bgh_A 135 NEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETE---------I--VLPNFDLAARHFPPVDNT 203 (421)
T ss_dssp CTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSC---------C--CCCBCSHHHHHSCCCTTC
T ss_pred cCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCC---------C--CCCccccccccCCCcccC
Confidence 46899999999999999999999999999999999999999999998541 1 4688998 655432 111
Q ss_pred chHHHHhhhhccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHH
Q 016059 243 DLVYVKHNMAFAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAH 322 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~ 322 (396)
.. + + ...+ .+.++++|+|++++|++||+++.... ...++|+||+|+||
T Consensus 204 ~~---------~------------~--~~~~--~~~~~~~f~f~~~~i~~LK~~a~~~~-------~~~~~St~d~l~A~ 251 (421)
T 2bgh_A 204 PS---------P------------E--LVPD--ENVVMKRFVFDKEKIGALRAQASSAS-------EEKNFSRVQLVVAY 251 (421)
T ss_dssp CC---------C------------C--CCCC--SSEEEEEEEECHHHHHHHHHHTC------------CCCCHHHHHHHH
T ss_pred CC---------C------------c--cCCc--cceEEEEEEECHHHHHHHHHHhhccC-------CCCCCchhHhHHHH
Confidence 00 0 0 1111 46789999999999999999987543 12579999999999
Q ss_pred HHHHHHhhccCC--CCceEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehhhhcccCcHHHHHHhc
Q 016059 323 VYACMVKAITED--ANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFVEKLS 390 (396)
Q Consensus 323 iW~~~~rAr~~~--~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~A~~~ 390 (396)
+|+|+++||... +++++.+.++||+|+|++||+|.+|+||++.. +.+.+++++ + ++|+++|.++
T Consensus 252 iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~-~~~~~~~~~--~-~~l~~~a~~i 317 (421)
T 2bgh_A 252 IWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATL-LFAAVDAEW--D-KDFPDLIGPL 317 (421)
T ss_dssp HHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEE-EEEEECTTC--C-CCGGGGHHHH
T ss_pred HHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEE-EEEEecccc--c-ccHHHHHHHH
Confidence 999999998652 56789999999999999999999999999999 999999886 4 7999999875
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=4.5e-47 Score=383.33 Aligned_cols=304 Identities=13% Similarity=0.101 Sum_probs=221.1
Q ss_pred cccCCccccccc-cccceeEEEEeecCCCCccchhhhHHHHHHHHHHHhhhhccCCCcEEeCCC----CCCCcEEEEeCC
Q 016059 45 TLSLTYFDTYWI-RFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPP----HAEKPAVCYSFP 119 (396)
Q Consensus 45 ~~~LS~lD~~~~-~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~LAGrl~~~~----~~g~~~I~~~~p 119 (396)
.++||.|||++. ...|++.++||+.++ ..+ .++++++||+||+++|++||||||||+.++ ++|+++|+|
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~--- 77 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSD-SSQ--YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVP--- 77 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSC-GGG--HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEEC---
T ss_pred cccCChhhcCccccccceeEEEEEECCC-CCC--HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEee---
Confidence 369999999861 235999999998644 212 356899999999999999999999998754 248899998
Q ss_pred CCCCCCCceEEEEEeecC-----Ccccccc-CCCcCccccCCCCCC--CCC-----CCCCCcEEEEEEEEecCCeEEEEE
Q 016059 120 HNYPKNDGVSVTVAESNA-----DFDLLAG-NGIRKAVEFYPLVPR--LST-----SDDKAEVIAIQITLFPNHGFSICI 186 (396)
Q Consensus 120 ~~~~~~~gv~f~~a~~~~-----~~~~l~~-~~p~~~~~~~~l~P~--~~~-----~~~~~Pll~vQvt~f~~GG~~l~~ 186 (396)
.+.++.|++++++. ++++|.. +.|...-....+.|. .+. ...+.|++.||||+| |||++||+
T Consensus 78 ----~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~ 152 (451)
T 2rkv_A 78 ----FEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTV 152 (451)
T ss_dssp ----CCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEE
T ss_pred ----cCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeee
Confidence 34566688888754 5777642 333211110112221 111 123589999999988 99999999
Q ss_pred eeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCC--CCCCcccccccCC-----CCCCchHHHHhhhhccCCCCC
Q 016059 187 SINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPE--RLTPCFDRTLIKD-----PGGIDLVYVKHNMAFAGLDPN 259 (396)
Q Consensus 187 ~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~--~~~P~~dr~~l~~-----p~~~~~~~~~~~~~~~~~~~~ 259 (396)
++||.++||.|+.+||++||++|||.. .+. ...|++||..+.. ++....+ +..+...+
T Consensus 153 ~~~H~v~Dg~g~~~Fl~awa~~~rg~~---------~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~-~~~~~~~~----- 217 (451)
T 2rkv_A 153 NGQHGAMDMVGQDAVIRLLSKACRNDP---------FTEEEMTAMNLDRKTIVPYLENYTIGPEVD-HQIVKADV----- 217 (451)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHHTCC---------CCHHHHHHTTCCSTTSSCCCTTCCCCGGGT-TCBCCTTS-----
T ss_pred eehhccccHHHHHHHHHHHHHHhcCCC---------CCccccccccCchhhccccccccCCCcccc-ccccCCCC-----
Confidence 999999999999999999999999843 111 0247788874431 1111000 00010000
Q ss_pred CCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHHHHHHHhhc-c-CCCCc
Q 016059 260 TRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAI-T-EDANT 337 (396)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW~~~~rAr-~-~~~~~ 337 (396)
..... ... ..++++++|+|++++|++||+++..+.. .+..++|+||+|+||+|||+++|| . .++++
T Consensus 218 ----~~~~~-~~~--~~~~~~~~f~f~~~~i~~LK~~a~~~~~-----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~ 285 (451)
T 2rkv_A 218 ----AGGDA-VLT--PVSASWAFFTFSPKAMSELKDAATKTLD-----ASTKFVSTDDALSAFIWKSASRVRLERIDGSA 285 (451)
T ss_dssp ----CC----------CCEEEEEEEECHHHHHHHHHHHHTTCC-----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred ----CCCCC-CCC--CCCceEEEEEECHHHHHHHHHHHhhhcc-----CCCCCccHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 00000 011 1467899999999999999999986532 113679999999999999999998 3 46788
Q ss_pred eEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehhhhcccCcHHHHHHhc
Q 016059 338 TVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKASDFLQGNGIDFVEKLS 390 (396)
Q Consensus 338 ~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~el~~~~~L~~~A~~~ 390 (396)
++++.++||+|+|++ +|.+|+||++.. +.+.++++||.+ ++|+++|.++
T Consensus 286 ~~~l~~~vd~R~rl~--lP~~y~GN~~~~-~~~~~~~~el~~-~~L~~~a~~i 334 (451)
T 2rkv_A 286 PTEFCRAVDARPAMG--VSNNYPGLLQNM-TYHNSTIGEIAN-ESLGATASRL 334 (451)
T ss_dssp EEEEEEEEECHHHHT--CCTTCCSCCEEE-EEEEEEHHHHHH-SCHHHHHHHH
T ss_pred ceEEEEEecccccCC--CCCCCcccceee-ecccCcHHHhcc-chHHHHHHHH
Confidence 999999999999997 899999999999 999999999998 8999999876
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.80 E-value=7.1e-07 Score=87.64 Aligned_cols=261 Identities=13% Similarity=0.108 Sum_probs=143.6
Q ss_pred cccccCCccccccccccceeEEEEeecCCCCccchhhhHHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCC
Q 016059 43 FATLSLTYFDTYWIRFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNY 122 (396)
Q Consensus 43 ~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~ 122 (396)
...+|||++.+.+....| ...+.|...+ .. ..++|++++.+++.++|.|-.++...++ +.+.+..
T Consensus 5 ~~~~pls~~Q~~~~~~~y-~~~~~~~l~g-~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~-~~~q~v~------ 69 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEV-FTSMTIQLRG-VI------DVDALSDAFDALLETHPVLASHLEQSSD-GGWNLVA------ 69 (422)
T ss_dssp SEEEECCHHHHHHHHTTC-EEEEEEEEES-CC------CHHHHHHHHHHHHHHCGGGSEEEEECTT-SSEEEEE------
T ss_pred ceeecCCHHHHHHHhcCc-eEEEEEEEec-CC------CHHHHHHHHHHHHHhCccceEEEEecCC-cceeeec------
Confidence 567899999876432222 2334455544 33 3789999999999999999999976442 3344333
Q ss_pred CCCCceE-EEEEeecCCccccccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHH
Q 016059 123 PKNDGVS-VTVAESNADFDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLF 201 (396)
Q Consensus 123 ~~~~gv~-f~~a~~~~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~f 201 (396)
....+. +.+.+ +.+.... ..+..- ..+.+ ...|++.+.+.. ..++..|.+.+||.++||.|+..|
T Consensus 70 -~~~~~~~~~~~d----~~~~~~~-----~~~~~~--~~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l 135 (422)
T 1q9j_A 70 -DDLLHSGICVID----GTAATNG-----SPSGNA--ELRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVL 135 (422)
T ss_dssp -CCSSSCCCEEEC---------------------C--CCCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHH
T ss_pred -cCCCCCceEEEE----CCCCCcc-----hhhhcc--cCccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHH
Confidence 121111 22111 1111000 000000 01122 467899888887 688999999999999999999999
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCCCccc--ccccC-C------CCCCchHHHHhhhh--ccCCCCCCCCCCCCCCCC
Q 016059 202 MKSWAYLCKQLDIHLQNKAPSLPERLTPCFD--RTLIK-D------PGGIDLVYVKHNMA--FAGLDPNTRNLKPNPVDP 270 (396)
Q Consensus 202 l~~WA~~~rg~~~~~~~~~~~~~~~~~P~~d--r~~l~-~------p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 270 (396)
++.|.+.+++.... .. ....+ ..++.+ ..... . ...... ...+|+. ++. ...+ |...
T Consensus 136 ~~~l~~~Y~~~~~~-~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~W~~~l~~------~~~l-p~~~ 203 (422)
T 1q9j_A 136 VDELFSRYTDAVTT-GD-PGPIT--PQPTPLSMEAVLAQRGIRKQGLSGAER-FMSVMYAYEIPA------TETP-AVLA 203 (422)
T ss_dssp HHHHHHHHHHHHHS-SS-CCCCC--CCCCCBCHHHHHHHSSCCC-----CTT-SSTTTTCC-------------------
T ss_pred HHHHHHHHHHhhcc-CC-CCCCC--CCCCCCCHHHHHHhcCCcccccchhhh-hhhhhhcccCCC------cccC-CCCC
Confidence 99999998741100 00 01111 112211 00000 0 000000 0011111 000 0000 0000
Q ss_pred CCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHHHHHHHhhccCCCCceEEEEEEecCCCC
Q 016059 271 KVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNADCRSR 350 (396)
Q Consensus 271 ~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~r 350 (396)
..+.........+.++.+..++||+.|... .+|.+.++.|.+...+.|-+. .......+.++++.|..
T Consensus 204 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----------~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~ 271 (422)
T 1q9j_A 204 HPGLPQAVPVTRLWLSKQQTSDLMAFGREH-----------RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFV 271 (422)
T ss_dssp -CCSBCCCCEEEECCCHHHHHHHHHHHTTT-----------TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTT
T ss_pred CCCCCCCccceEEEeCHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccc
Confidence 001012235678899999999999988653 488999999976666665421 23567899999999998
Q ss_pred CCCCCC
Q 016059 351 LDPPLP 356 (396)
Q Consensus 351 l~pplP 356 (396)
..|+++
T Consensus 272 ~~~~~~ 277 (422)
T 1q9j_A 272 LAPPVA 277 (422)
T ss_dssp SSSCCC
T ss_pred cCCCCC
Confidence 765543
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.24 E-value=5.3e-05 Score=76.07 Aligned_cols=270 Identities=8% Similarity=-0.095 Sum_probs=146.1
Q ss_pred cccccCCccccccc------cccceeEEEEeecCCCCccchhhhHHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEE
Q 016059 43 FATLSLTYFDTYWI------RFGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (396)
Q Consensus 43 ~~~~~LS~lD~~~~------~~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~ 116 (396)
...+|||+.-+.+. +-......+.|...+ .. ..++|++++.+++.+++.|--++...+ |.+. ..
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g-~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~--~~~~-~v 80 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSG-RI------DDDRLAAAADEVLDAFPLLRVNFVDDD--GLWM-RT 80 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEES-SC------CHHHHHHHHHHHHHHCGGGGEEEEESS--SEEE-EE
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeC-CC------CHHHHHHHHHHHHHhchhceeEEEccC--CEEE-Ee
Confidence 56788888765321 000112345555544 33 388999999999999999988887532 5555 44
Q ss_pred eCCCCCCCCCceEEEEEeecC-Cc--cccccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeeeec
Q 016059 117 SFPHNYPKNDGVSVTVAESNA-DF--DLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVL 193 (396)
Q Consensus 117 ~~p~~~~~~~gv~f~~a~~~~-~~--~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~ 193 (396)
. +.. +.+.+.+... +- +++.... ....-..| +-...|++.+.+.....+...|.+.+||.++
T Consensus 81 ~------~~~-~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~f------dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~ 145 (493)
T 4hvm_A 81 R------ENA-DALVRSDLRGHPDPQARCVELL--RADRDRPT------DPERDPLVRLHLVRLSETDVVLGVVAHQMLL 145 (493)
T ss_dssp C------SCC-CCEEEEECTTSSSHHHHHHHHH--HHHHSSCC------CTTTSCSEEEEEEECSSSEEEEEEEEETTTC
T ss_pred c------CCC-CCceEEECCCCCchHHHHHHHH--HHHhcCCC------CCCCCCeEEEEEEEECCCcEEEEEecchhhc
Confidence 1 223 4444433210 00 1110000 00000011 1135689999888886677899999999999
Q ss_pred chhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccccccCC-CC--CCch---HHHHhhh-h-ccCCCCCCCCCCC
Q 016059 194 DGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDRTLIKD-PG--GIDL---VYVKHNM-A-FAGLDPNTRNLKP 265 (396)
Q Consensus 194 Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~dr~~l~~-p~--~~~~---~~~~~~~-~-~~~~~~~~~~~~~ 265 (396)
||.|+..|++.+.+.+.|.. ++ .++.| ...- .. .... .....|+ . +.+... +
T Consensus 146 Dg~S~~~l~~~l~~~Y~g~~----------~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~----l-- 205 (493)
T 4hvm_A 146 DARSRYMVLGAVWQAYYGRF----------RP--AQYRD--FAEVADFHPLDRETVRVARHRWWSRRLPALPV----R-- 205 (493)
T ss_dssp CHHHHHHHHHHHHHHHTTCC----------CG--GGSBC--GGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC----C--
T ss_pred cHHHHHHHHHHHHHHhCCCC----------CC--cCHHH--HHHHHhhhhcccChhhHHHHHHHHHhccCCCC----C--
Confidence 99999999999999996532 11 11111 1110 00 0111 1111222 2 111111 0
Q ss_pred CCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCcccc--HHHHHHHHHHHHHHhhccC--------CC
Q 016059 266 NPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLS--SYVLTCAHVYACMVKAITE--------DA 335 (396)
Q Consensus 266 ~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iS--t~daL~A~iW~~~~rAr~~--------~~ 335 (396)
... +... .......+.++.+..++|++.|... .+| .+.++.|.+-..+.+-+.- ..
T Consensus 206 ~~~-~~~~--~~~~~~~~~l~~~~~~~l~~~a~~~-----------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g 271 (493)
T 4hvm_A 206 GGD-GGPV--GPPETSRLRVPGSRWQALTEPGGPL-----------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG 271 (493)
T ss_dssp C----------CCEEEEEEEEHHHHHHHHCC-----------------CHHHHHHHHHHHHHHHC---------------
T ss_pred CCC-CCCC--CCCeeEEEEcCHHHHHHHHHHHHHc-----------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCC
Confidence 000 1111 1256788999999999999877653 477 8999988755555444100 23
Q ss_pred CceEEEEEEecCCCCCCCCCCCCCcccccccceeeeeehh
Q 016059 336 NTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVAKAS 375 (396)
Q Consensus 336 ~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~~ 375 (396)
.....+.++++.|..- --.+.+|+++-. ....+...
T Consensus 272 ~~dv~~g~~~~gR~~~---~~~~~vG~f~n~-lplr~~~~ 307 (493)
T 4hvm_A 272 KDSLYLSTEVDLRDHL---QLGSVVGPLTDR-VVFGVDLT 307 (493)
T ss_dssp -CEEEEEEEEEHHHHT---TCCSBCSCCEEE-EEEEEECT
T ss_pred CCCEEEEeeccCCCCc---chhcCeEeeece-eEEEEecC
Confidence 5678999999999662 235667777665 55555444
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.16 E-value=0.0002 Score=72.34 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=133.5
Q ss_pred HHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCCceEEEEEee-cCCccccccCCCcCccccCCCCCCC
Q 016059 82 LPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAES-NADFDLLAGNGIRKAVEFYPLVPRL 160 (396)
Q Consensus 82 ~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~-~~~~~~l~~~~p~~~~~~~~l~P~~ 160 (396)
.++|++++.+++.+++.|--++...+ |.+.-... +...+.+.+.+. +..+.++.. . +.-.+
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~--~~~~q~v~------~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~f 194 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVN--GEPVQNIH------EDVPFALAYSEVTEEEARELVS-------S---LVQPF 194 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEET--TEEEEEEC------SCCCCCCEEEECCHHHHHHHHH-------H---TCCCC
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeC--CEEEEEEC------CCCCCceEEEeCCHHHHHHHHH-------H---hcCCC
Confidence 78999999999999999988887532 44332331 222222222211 111111100 0 00001
Q ss_pred CCCCCCCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc-----ccc
Q 016059 161 STSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD-----RTL 235 (396)
Q Consensus 161 ~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~d-----r~~ 235 (396)
+-...|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+++.. +++...++.| +..
T Consensus 195 --dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~---------l~~~~~~~~d~~~~~~~~ 263 (520)
T 2jgp_A 195 --DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDV---------LPELRIQYKDFAVWQQEF 263 (520)
T ss_dssp --CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCC---------CCCCSCCHHHHHHHHHHH
T ss_pred --CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCC---------CCCCCCCHHHHHHHHHHh
Confidence 113578888888877678899999999999999999999999999998742 1211111111 111
Q ss_pred cCCCCCCchHHHHh-hhh-ccCCCCCCCCCCCCCC--CCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCc
Q 016059 236 IKDPGGIDLVYVKH-NMA-FAGLDPNTRNLKPNPV--DPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQL 311 (396)
Q Consensus 236 l~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~ 311 (396)
...+ .. ..... |.. +.+..+ ...++.. .+... ........+.++.+..++||+.|...
T Consensus 264 ~~~~-~~--~~~~~yW~~~l~~~~~---~~~lp~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~a~~~----------- 325 (520)
T 2jgp_A 264 SQSA-AF--HKQEAYWLQTFADDIP---VLNLPTDFTRPSTQ-SFAGDQCTIGAGKALTEGLHQLAQAT----------- 325 (520)
T ss_dssp TTSH-HH--HHHHHHHHHHTSSCCC---CCCCCCSSCCCSSC-CCBEEEEEEECCHHHHHHHHHHHHHH-----------
T ss_pred hcCh-hh--HHHHHHHHHHhCCCCC---cCCCCCCCCCCCCC-CCCccEEEEeCCHHHHHHHHHHHHHc-----------
Confidence 1110 00 01112 222 111110 0011100 01111 12345678899999999999988754
Q ss_pred cccHHHHHHHHHHHHHHhhccCCCCceEEEEEEecCCCCCCCCCCCCCcccccccceeeee
Q 016059 312 HLSSYVLTCAHVYACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAAVCVVA 372 (396)
Q Consensus 312 ~iSt~daL~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~ 372 (396)
.+|.+.++.|.+-..+.+-. ......+.++++.|..- --.+-+|+.+-. ....+
T Consensus 326 ~~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~---~~~~~vG~f~n~-lplr~ 379 (520)
T 2jgp_A 326 GTTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHA---DLEPIVGMFVNT-LAMRN 379 (520)
T ss_dssp TCCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSG---GGTTCCSCCCEE-EEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCch---hhhccEEeeeee-eeEEe
Confidence 37889998886555554443 24668999999999762 124566666555 44333
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.09 E-value=0.0004 Score=68.22 Aligned_cols=231 Identities=13% Similarity=0.011 Sum_probs=128.8
Q ss_pred HHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCCceEEEEEeec-C-C----ccccccCCCcCccccCC
Q 016059 82 LPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESN-A-D----FDLLAGNGIRKAVEFYP 155 (396)
Q Consensus 82 ~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~-~-~----~~~l~~~~p~~~~~~~~ 155 (396)
.+.|++++.+++.+++.|--++... +| .|.- ...+.+.+.+.. . . +.++... ...
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~--~~--~v~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~------~~~- 95 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ--GE--LYWH--------PFSPPIDYQDLSIHLEAEPLAWRQIEQ------DLQ- 95 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT--CC--EEEC--------SSCCCCEEEECTTCTTHHHHHHHHHHH------HHT-
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec--CC--eECC--------CcCCCccEEeCCCCCCHHHHHHHHHHH------Hhc-
Confidence 7899999999999999998888743 24 3322 222223222211 0 0 1111000 000
Q ss_pred CCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc---
Q 016059 156 LVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD--- 232 (396)
Q Consensus 156 l~P~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~d--- 232 (396)
.+.+-...|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+.+... ....+....++.|
T Consensus 96 ----~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~-----g~~~~~~~~~~~~~~~ 166 (436)
T 1l5a_A 96 ----RSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLS-----GQTPTAAFKPYQSYLE 166 (436)
T ss_dssp ----SCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHH-----TCCCCCCCCCHHHHHH
T ss_pred ----CCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhc-----CCCCCCCccCHHHHHH
Confidence 0011135688888887776788999999999999999999999999999875211 0011111111111
Q ss_pred --ccccCCCCCCchHHHHh-hhh-ccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccc
Q 016059 233 --RTLIKDPGGIDLVYVKH-NMA-FAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKS 308 (396)
Q Consensus 233 --r~~l~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~ 308 (396)
+..+... .. ..... |.. +.+... ...+ |. .............+.++.+..++|++.|...
T Consensus 167 ~~~~~~~~~-~~--~~~~~~W~~~l~~~~~---~~~l-p~-~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-------- 230 (436)
T 1l5a_A 167 EEAAYLTSH-RY--WQDKQFWQGYLREAPD---LTLT-SA-TYDPQLSHAVSLSYTLNSQLNHLLLKLANAN-------- 230 (436)
T ss_dssp HHHHHHTSH-HH--HHHHHHHHHHHHTSCC---CCBC-CT-TCCGGGCCEEEEEEECCHHHHHHHHHHHHHT--------
T ss_pred HHHHhhccH-hH--HHHHHHHHHHhcCCCC---cccC-CC-CCCCCcccceeeEEecCHHHHHHHHHHHHHh--------
Confidence 0011111 00 00112 221 111110 0011 10 1111012345678999999999999988764
Q ss_pred cCccccHHHHHHHHHHHHHHhhccCCCCceEEEEEEecCCCCCCCCCCCCCccccccc
Q 016059 309 KQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSA 366 (396)
Q Consensus 309 ~~~~iSt~daL~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 366 (396)
.+|.+.++.|.+-..+.+-- . ....+.++++.|..- --.+-+|+.+-.
T Consensus 231 ---~~t~~~~l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~~---~~~~~vG~f~n~ 278 (436)
T 1l5a_A 231 ---QIGWPDALVALCALYLESAE---P-DAPWLWLPFMNRWGS---VAANVPGLMVNS 278 (436)
T ss_dssp ---TCCHHHHHHHHHHHHHHHHS---T-TCCEEEEEECCCTTS---GGGGSCSCCCEE
T ss_pred ---CCCHHHHHHHHHHHHHHHhh---C-CceEEeeecccCCCh---HHhcCcceEEEE
Confidence 47889999887555544432 3 678999999999752 224555665544
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.95 E-value=0.0021 Score=63.52 Aligned_cols=277 Identities=12% Similarity=0.041 Sum_probs=145.5
Q ss_pred cccccCCccccccc------c-ccceeEEEEeecCCCCccchhhhHHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEE
Q 016059 43 FATLSLTYFDTYWI------R-FGSWDNLLFYEIRGLTWDSFSKVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVC 115 (396)
Q Consensus 43 ~~~~~LS~lD~~~~------~-~~y~~~~~~f~~~~~~~~~~~~~~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~ 115 (396)
...+|||+..+ |. . ..|. ..+.|...+ .. ..+.|+++|.+++.+++.|--++...+ |.+.-.
T Consensus 15 ~~~~pls~~Q~-~~~~~~~~~~~~y~-~~~~~~l~g-~l------d~~~L~~Al~~lv~rh~~LRt~f~~~~--~~~~q~ 83 (466)
T 2xhg_A 15 AGNVPLTPIQK-WFFGKNFTNTGHWN-QSSVLYRPE-GF------DPKVIQSVMDKIIEHHDALRMVYQHEN--GNVVQH 83 (466)
T ss_dssp CEECCCCHHHH-HHHHTTCTTTTCBE-EEEEEEETT-CC------CHHHHHHHHHHHHHHSGGGGEEEECGG--GCCEEE
T ss_pred CCCCCCCHHHH-HHHhCCCCCcCcce-eEEEEEcCC-CC------CHHHHHHHHHHHHHhChHhheEEecCC--Cceeee
Confidence 45788888765 32 0 1122 345555554 33 388999999999999999988887532 444333
Q ss_pred EeCCCCCCCCCceEEEEEeec--CCccccccCCCcCccccCCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeeeec
Q 016059 116 YSFPHNYPKNDGVSVTVAESN--ADFDLLAGNGIRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVL 193 (396)
Q Consensus 116 ~~~p~~~~~~~gv~f~~a~~~--~~~~~l~~~~p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~ 193 (396)
.. + .....+.+.+.+.. .+.++..... ...... +.+-...|++.+.+.... ++-.|-+.+||.++
T Consensus 84 v~-~---~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~-----~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~ 150 (466)
T 2xhg_A 84 NR-G---LGGQLYDFFSYNLTAQPDVQQAIEAE---TQRLHS-----SMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVV 150 (466)
T ss_dssp EC-C---SSSCCCEEEEEECTTCSCHHHHHHHH---HHHHHT-----TCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGC
T ss_pred cc-c---cccccceeEEEecCCcccHHHHHHHH---HHHHHh-----ccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeee
Confidence 31 0 01123344333211 1111100000 000000 111235789999888884 44457799999999
Q ss_pred chhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCccc-----ccccCCCC-CCchHHHHhhhhccCCCCCCCCCCCCC
Q 016059 194 DGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFD-----RTLIKDPG-GIDLVYVKHNMAFAGLDPNTRNLKPNP 267 (396)
Q Consensus 194 Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~d-----r~~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (396)
||.|+..|++.+.+.+++... .....+++...++.| +..+..+. .-...++.+. +.+... ..+..
T Consensus 151 Dg~S~~~l~~el~~~Y~~~~~---g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~--l~~~~~----~~lp~ 221 (466)
T 2xhg_A 151 DGISWRILFEDLATGYAQALA---GQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESL--ESQAKN----VSLPK 221 (466)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT---TCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHH--HHHCCC----CCCCC
T ss_pred chhhHHHHHHHHHHHHHHHHc---CCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHh--hccCCc----ccCCc
Confidence 999999999999998875321 000111111011111 01111100 0011222211 111000 01110
Q ss_pred C--CCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccCccccHHHHHHHHHHHHHHhhccCCCCceEEEEEEe
Q 016059 268 V--DPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNA 345 (396)
Q Consensus 268 ~--~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW~~~~rAr~~~~~~~~~l~~~v 345 (396)
. .+... ........+.++.+..++|++.+... ..+|.++++.|.+-..+.+-. ......+.+++
T Consensus 222 ~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~~~----------~~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~ 287 (466)
T 2xhg_A 222 DYEVTDCK-QKSVRNMRIRLHPEETEQLLKHANQA----------YQTEINDLLLAALGLAFAEWS---KLAQIVIHLEG 287 (466)
T ss_dssp SSCCSSCB-GGGEEEEEEECCHHHHHHHHHTGGGT----------TTCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEE
T ss_pred cccccccc-cccceEEEEEcCHHHHHHHHHHhHHh----------hCCCHHHHHHHHHHHHHHHHh---CCCceEEEecC
Confidence 0 01110 12345678899999999998876432 247889999887665555543 34678999999
Q ss_pred cCCCCCCC-CCCCCCccccccc
Q 016059 346 DCRSRLDP-PLPVNYFGNCVSA 366 (396)
Q Consensus 346 d~R~rl~p-plP~~Y~GN~~~~ 366 (396)
+.|....+ +--.+-+|+.+..
T Consensus 288 ~gR~~~~~~~~~~~~vG~f~n~ 309 (466)
T 2xhg_A 288 HGREDIIEQANVARTVGWFTSQ 309 (466)
T ss_dssp CCCCSCSTTCCCTTCCSCCCEE
T ss_pred CCCCccccCCCccccccceeee
Confidence 99987521 1224556665544
No 11
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.88 E-value=0.00031 Score=71.24 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCC---ceEEEEEeecCCcccccc---------C-
Q 016059 79 KVVLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKND---GVSVTVAESNADFDLLAG---------N- 145 (396)
Q Consensus 79 ~~~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~---gv~f~~a~~~~~~~~l~~---------~- 145 (396)
++..+.||.|.-.+--++|-+|+++..+ +++.....|..|.+..+-+ .--|.+...+.+-+|+.. +
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d-~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWD-DEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECC-SSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeC-CCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 4678889999998888999999999977 3355555563221110000 112444443334444310 1
Q ss_pred C-CcCccccCCCCCCCCCCCCCCcEEEEEEEEecCC--eEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccc--cCCC
Q 016059 146 G-IRKAVEFYPLVPRLSTSDDKAEVIAIQITLFPNH--GFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHL--QNKA 220 (396)
Q Consensus 146 ~-p~~~~~~~~l~P~~~~~~~~~Pll~vQvt~f~~G--G~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~--~~~~ 220 (396)
. |.....+.-+.+. ...+.| + .+ -.-|.+.+||.++||.|...|++.+=+......... .. .
T Consensus 151 ~~p~~~~~l~~v~~~---~~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~-~ 217 (519)
T 3fot_A 151 NTPSKSIELFLLSDV---STDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSRE-M 217 (519)
T ss_dssp CCCCCSCEEEEEESS---SSTTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGG-S
T ss_pred CCCccceEEEEEecc---cccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccC-C
Confidence 1 1111111101111 001111 2 23 466778899999999999999998877665321000 00 0
Q ss_pred CCCC-----CCCCCcccccccCCCCC-CchHH---HHhhhh-ccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHH
Q 016059 221 PSLP-----ERLTPCFDRTLIKDPGG-IDLVY---VKHNMA-FAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDL 290 (396)
Q Consensus 221 ~~~~-----~~~~P~~dr~~l~~p~~-~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l 290 (396)
..+. ..+.|.+. +.+..|.. ...+. ..++.. +.. ....+.+... +. + ..-....+.|++++.
T Consensus 218 ~~~~~g~E~~~L~P~~e-~~~~~p~~~~~~e~~~~~~~~~~~~~~---~~~~~~~P~~-~~-~--~~~~~~~~~ls~~~t 289 (519)
T 3fot_A 218 KKIQWGQEIKNLSPPVV-DSLKLDINTLGSEFDDKCTEYTSALVA---NYKSRGMKFQ-PG-L--ALPRCVIHKLSADES 289 (519)
T ss_dssp CCCCTTTTGGGSCCCTG-GGBSSCGGGCCHHHHHHHHHHHHHHHH---HHHSCCSBCC-CC-C--CCEEEEEEECCHHHH
T ss_pred CcCCCCcccccCCcCHH-HHhCCCCCCCCHHHHHHHHHHHHHhhc---CCCcccCCCC-CC-C--CCcceEEEEcCHHHH
Confidence 0000 01112111 11111111 11111 111110 000 0001111110 11 1 223457889999999
Q ss_pred HHHHHHHHhhhhhccccccCccccHHHHHHHHHHHHHHhhcc---CCCCceEEEEEEecCCCCCCCCCCCCCcccccccc
Q 016059 291 NKLKHKLLLAKEQHQSKSKQLHLSSYVLTCAHVYACMVKAIT---EDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSAA 367 (396)
Q Consensus 291 ~~LK~~a~~~~~~~~~~~~~~~iSt~daL~A~iW~~~~rAr~---~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 367 (396)
++|++.|.+.. ++.+|-+.+|.|.+-.++.+... ........+..+||+|+++.++.-.+|+|.++..
T Consensus 290 ~~L~~~ck~~~--------~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~- 360 (519)
T 3fot_A 290 IDIVKAVKTRL--------GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTA- 360 (519)
T ss_dssp HHHHHHHHHHT--------CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEE-
T ss_pred HHHHHHHHhcC--------CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeee-
Confidence 99999999763 24589999998876666655322 1123468899999999999765556788888776
Q ss_pred eeeee
Q 016059 368 VCVVA 372 (396)
Q Consensus 368 ~~~~~ 372 (396)
....+
T Consensus 361 ~~~~v 365 (519)
T 3fot_A 361 AVVRI 365 (519)
T ss_dssp EEEEE
T ss_pred eeeEe
Confidence 55443
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.85 E-value=0.00084 Score=75.62 Aligned_cols=242 Identities=12% Similarity=0.072 Sum_probs=133.3
Q ss_pred HHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEEeCCCCCCCCCceEEEEEeec-CC-------ccccccCCCcCcccc
Q 016059 82 LPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCYSFPHNYPKNDGVSVTVAESN-AD-------FDLLAGNGIRKAVEF 153 (396)
Q Consensus 82 ~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~~~p~~~~~~~gv~f~~a~~~-~~-------~~~l~~~~p~~~~~~ 153 (396)
++.|++++.+++.+++.|--++.....++-.++.. ....+.+.+.+.. .+ +.++... .. -
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~--~ 116 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVL-------KKRQFHIEEIDLTHLTGSEQTAKINEYKEQ---DK--I 116 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEE-------SCCCCCEEEEECTTSCHHHHHHHHHHHHHH---HH--H
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEEC-------CCCCCceEEEECCCCCchhHHHHHHHHHHH---Hh--c
Confidence 78999999999999999988887543312344444 2223333332211 00 1111000 00 0
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeeeecchhhHHHHHHHHHHHHhcccccccCCCCCCCCCCCCcccc
Q 016059 154 YPLVPRLSTSDDKAEVIAIQITLFPNHGFSICISINHAVLDGTSLMLFMKSWAYLCKQLDIHLQNKAPSLPERLTPCFDR 233 (396)
Q Consensus 154 ~~l~P~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~~~~~~~~~~~~~~~P~~dr 233 (396)
..| +-...|++++.+.....+...|.+.+||.++||.|+..|++.+.+++++... .....++ ...++.|-
T Consensus 117 ~~f------dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~---g~~~~l~-~~~~y~d~ 186 (1304)
T 2vsq_A 117 RGF------DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALRE---QKPYSLP-PVKPYKDY 186 (1304)
T ss_dssp HCC------CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHT---TCCCCCC-CCCCTHHH
T ss_pred CCC------CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhc---CCCCCCC-CcccHHHH
Confidence 011 1135789999998887789999999999999999999999999998876321 0001111 11122110
Q ss_pred c-ccCCCCCCchHHHHh-hhh-ccCCCCCCCCCCCCCCCCCCcCCCCceEEEEEeCHHHHHHHHHHHHhhhhhccccccC
Q 016059 234 T-LIKDPGGIDLVYVKH-NMA-FAGLDPNTRNLKPNPVDPKVADTNNLVRRTFELSSEDLNKLKHKLLLAKEQHQSKSKQ 310 (396)
Q Consensus 234 ~-~l~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~ 310 (396)
. .+.... . ....+ |.. +.+... . ..+.................+.++++..++||+.|...
T Consensus 187 ~~~~~~~~-~--~~~~~yW~~~L~~~~~-~--~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---------- 250 (1304)
T 2vsq_A 187 IKWLEKQD-K--QASLRYWREYLEGFEG-Q--TTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---------- 250 (1304)
T ss_dssp HHHHHTSC-H--HHHHHHHHHHHTTCCC-C--CTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT----------
T ss_pred HHHHhcch-h--hHHHHHHHHHhCCCCc-c--ccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc----------
Confidence 0 011111 1 11112 221 111110 0 01111000000012335577889999999999998764
Q ss_pred ccccHHHHHHHHHHHHHHhhccCCCCceEEEEEEecCCCCCCCCCCCCCccccccc
Q 016059 311 LHLSSYVLTCAHVYACMVKAITEDANTTVVFSFNADCRSRLDPPLPVNYFGNCVSA 366 (396)
Q Consensus 311 ~~iSt~daL~A~iW~~~~rAr~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 366 (396)
.+|.+.+|.|.+-..+.|-- ......+..+++.|....+.+ .+-+|+.+-.
T Consensus 251 -~~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvnt 301 (1304)
T 2vsq_A 251 -HTTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINV 301 (1304)
T ss_dssp -TCCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEE
T ss_pred -CCCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchhh-hcccccceeE
Confidence 37889988886544444432 346789999999997632222 3445554443
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=75.76 E-value=2 Score=37.79 Aligned_cols=45 Identities=22% Similarity=0.397 Sum_probs=33.1
Q ss_pred CCcEEEEEEEEecCCe--EEEEEeeeeeecchhhHHHHHHHHHHHHh
Q 016059 166 KAEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLCK 210 (396)
Q Consensus 166 ~~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~WA~~~r 210 (396)
..|++.+--..-+.|. +-|++++||.++||.-...|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 4588764221111233 67899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=74.75 E-value=2.2 Score=37.66 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=31.4
Q ss_pred CCcEEEEEEEEecCCe--EEEEEeeeeeecchhhHHHHHHHHHHHH
Q 016059 166 KAEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLC 209 (396)
Q Consensus 166 ~~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~WA~~~ 209 (396)
..|++.+=-..-+.|. +-|++++||.++||.-...|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4587753111111233 6789999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=74.08 E-value=2.4 Score=37.54 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=33.4
Q ss_pred CcEEEEEEEEecCCe--EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 167 AEVIAIQITLFPNHG--FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 167 ~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
.|++.+--..-+.|+ +-|++++||.++||.-...|++.+.+.+..
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 214 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDE 214 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHhC
Confidence 577754222221233 678999999999999999999999988753
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=71.30 E-value=2.8 Score=37.55 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=27.7
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999988753
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=71.16 E-value=2.5 Score=37.45 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=27.4
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.|.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998864
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=70.52 E-value=3.1 Score=37.37 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=27.6
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999998764
No 19
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=70.37 E-value=3.2 Score=37.05 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=27.4
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998764
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=68.97 E-value=3.5 Score=37.50 Aligned_cols=30 Identities=20% Similarity=0.523 Sum_probs=27.3
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998763
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=63.53 E-value=5.2 Score=36.21 Aligned_cols=30 Identities=27% Similarity=0.532 Sum_probs=27.6
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.+.||.-...|++.|.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998875
No 22
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=63.29 E-value=5.3 Score=27.69 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEE
Q 016059 81 VLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (396)
Q Consensus 81 ~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~ 116 (396)
..+.++.+|...+.+-..+||.+...-+++.++|.+
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiri 46 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRI 46 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEE
Confidence 478899999999999999999998755557789888
No 23
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=62.07 E-value=5.8 Score=35.78 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=27.6
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998875
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=50.29 E-value=15 Score=28.67 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEE
Q 016059 81 VLPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (396)
Q Consensus 81 ~~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~ 116 (396)
..+.|+.+|...+.+-..+||.+...-++++++|.+
T Consensus 93 dlea~ekalkemirqarkfagtvtytl~gn~l~i~i 128 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 128 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 478999999999999999999998765557888887
No 25
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=49.01 E-value=12 Score=20.17 Aligned_cols=20 Identities=10% Similarity=0.124 Sum_probs=16.4
Q ss_pred CccccHHHHHHHHHHHHHHh
Q 016059 310 QLHLSSYVLTCAHVYACMVK 329 (396)
Q Consensus 310 ~~~iSt~daL~A~iW~~~~r 329 (396)
++-+++.|-|+-|+||++..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 34578899999999999864
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=47.05 E-value=15 Score=28.67 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhhhccCCCcEEeCCCCCCCcEEEE
Q 016059 82 LPKLKLSLSLTLLHYLPLAGHLMWPPHAEKPAVCY 116 (396)
Q Consensus 82 ~~~Lk~sL~~~L~~~p~LAGrl~~~~~~g~~~I~~ 116 (396)
.+.|+.+|...+.+-..+||.+...-++++++|.+
T Consensus 13 lea~ekalkemirqarkfagtvtytl~gn~l~i~i 47 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 47 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 78899999999999999999998755557788887
No 27
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=43.19 E-value=5 Score=39.21 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=0.0
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.++||.-...|++.|.+++..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999887764
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=30.86 E-value=70 Score=20.73 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=19.6
Q ss_pred EEEEEeCHHHHHHHHHHHHhhh
Q 016059 280 RRTFELSSEDLNKLKHKLLLAK 301 (396)
Q Consensus 280 ~~~f~fs~~~l~~LK~~a~~~~ 301 (396)
...|+||+++-+.|++.|.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHTT
T ss_pred eEEEEecHHHHHHHHHHHHHHH
Confidence 4689999999999999998865
No 29
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=21.37 E-value=1.7e+02 Score=19.59 Aligned_cols=25 Identities=24% Similarity=0.118 Sum_probs=21.1
Q ss_pred CceEEEEEeCHHHHHHHHHHHHhhh
Q 016059 277 NLVRRTFELSSEDLNKLKHKLLLAK 301 (396)
Q Consensus 277 ~~~~~~f~fs~~~l~~LK~~a~~~~ 301 (396)
+.....|+||.|+-+.|.+.|.++.
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~ 38 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV 38 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH
Confidence 4456789999999999999998764
No 30
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=21.09 E-value=54 Score=36.00 Aligned_cols=30 Identities=13% Similarity=0.301 Sum_probs=26.9
Q ss_pred EEEEEeeeeeecchhhHHHHHHHHHHHHhc
Q 016059 182 FSICISINHAVLDGTSLMLFMKSWAYLCKQ 211 (396)
Q Consensus 182 ~~l~~~~~H~v~Dg~g~~~fl~~WA~~~rg 211 (396)
+-|+++++|.|+||.-...|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 779999999999999999999988877654
Done!