Query 016064
Match_columns 396
No_of_seqs 194 out of 1378
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 07:16:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ecs_A Translation initiation 100.0 8.2E-74 2.8E-78 564.1 25.8 300 95-396 2-305 (315)
2 3a11_A Translation initiation 100.0 1.3E-71 4.3E-76 554.3 26.3 309 82-395 12-326 (338)
3 2yvk_A Methylthioribose-1-phos 100.0 1.8E-68 6.1E-73 536.9 23.3 313 73-395 39-368 (374)
4 1t5o_A EIF2BD, translation ini 100.0 6.7E-68 2.3E-72 529.3 24.2 309 75-395 14-339 (351)
5 1t9k_A Probable methylthioribo 100.0 1.9E-67 6.6E-72 525.3 23.5 309 74-395 18-343 (347)
6 2a0u_A Initiation factor 2B; S 100.0 2.8E-66 9.7E-71 522.3 25.2 316 67-386 22-369 (383)
7 1vb5_A Translation initiation 100.0 2.9E-62 9.8E-67 475.1 18.8 271 92-388 5-275 (276)
8 1w2w_B 5-methylthioribose-1-ph 100.0 2.7E-46 9.2E-51 344.9 5.8 157 239-395 2-191 (191)
9 1w2w_A 5-methylthioribose-1-ph 99.9 2.3E-22 7.9E-27 187.4 8.2 160 75-242 20-208 (211)
10 1uj6_A Ribose 5-phosphate isom 98.3 1.6E-06 5.6E-11 81.4 9.2 117 200-332 7-130 (227)
11 2f8m_A Ribose 5-phosphate isom 98.1 7.2E-06 2.5E-10 77.9 8.5 121 198-332 9-137 (244)
12 1lk5_A D-ribose-5-phosphate is 98.1 1.6E-05 5.4E-10 74.8 10.1 119 200-332 5-129 (229)
13 1m0s_A Ribose-5-phosphate isom 98.1 9E-06 3.1E-10 76.0 8.3 119 200-332 5-125 (219)
14 3kwm_A Ribose-5-phosphate isom 98.0 1.5E-05 5.1E-10 74.8 8.7 120 200-332 11-131 (224)
15 3hhe_A Ribose-5-phosphate isom 97.8 6.1E-05 2.1E-09 71.8 9.5 119 200-332 26-148 (255)
16 3l7o_A Ribose-5-phosphate isom 97.8 5.6E-05 1.9E-09 70.9 8.0 119 200-332 3-126 (225)
17 1xtz_A Ribose-5-phosphate isom 97.8 3.6E-05 1.2E-09 73.9 6.8 120 199-332 19-152 (264)
18 1o8b_A Ribose 5-phosphate isom 97.7 6.1E-06 2.1E-10 77.2 1.1 119 200-332 5-125 (219)
19 2pjm_A Ribose-5-phosphate isom 97.6 0.00017 5.9E-09 67.6 9.2 118 200-332 5-128 (226)
20 3uw1_A Ribose-5-phosphate isom 97.3 0.0006 2.1E-08 64.4 8.2 115 201-332 14-137 (239)
21 4gmk_A Ribose-5-phosphate isom 94.5 0.25 8.6E-06 46.2 10.9 115 200-332 6-129 (228)
22 3ixq_A Ribose-5-phosphate isom 89.4 1.2 4E-05 41.6 8.4 115 201-332 6-128 (226)
23 3mad_A Sphingosine-1-phosphate 88.2 4.4 0.00015 40.8 12.5 98 219-323 164-275 (514)
24 3rrl_A Succinyl-COA:3-ketoacid 85.7 2.6 8.8E-05 39.3 8.4 98 207-304 12-172 (235)
25 3hgm_A Universal stress protei 85.5 5.3 0.00018 32.4 9.5 61 259-323 76-147 (147)
26 3i6i_A Putative leucoanthocyan 85.5 3.7 0.00013 38.9 9.7 102 216-324 10-118 (346)
27 3s3t_A Nucleotide-binding prot 84.9 11 0.00038 30.3 11.2 102 218-323 8-145 (146)
28 3dqp_A Oxidoreductase YLBE; al 84.1 3 0.0001 36.7 7.8 100 218-326 2-106 (219)
29 3dlo_A Universal stress protei 83.3 19 0.00063 30.0 12.7 103 217-323 26-154 (155)
30 3ic5_A Putative saccharopine d 83.1 14 0.00048 28.5 11.1 99 216-330 5-106 (118)
31 3e8x_A Putative NAD-dependent 82.9 2.7 9.4E-05 37.4 7.1 98 215-327 20-132 (236)
32 4gx0_A TRKA domain protein; me 82.8 2.3 8E-05 43.7 7.4 106 208-324 315-440 (565)
33 1poi_B Glutaconate coenzyme A- 81.7 8.8 0.0003 36.2 10.4 93 201-301 7-116 (260)
34 3rrl_B Succinyl-COA:3-ketoacid 79.8 2.1 7.3E-05 39.1 5.2 94 202-302 2-111 (207)
35 1t3i_A Probable cysteine desul 79.7 34 0.0012 32.3 14.0 101 216-322 91-204 (420)
36 1x92_A APC5045, phosphoheptose 79.2 29 0.001 30.0 12.5 36 256-291 130-168 (199)
37 2hj0_A Putative citrate lyase, 78.5 20 0.00067 37.2 12.6 148 201-385 252-452 (519)
38 4dq6_A Putative pyridoxal phos 78.4 11 0.00038 35.4 10.1 101 215-322 90-202 (391)
39 3g0t_A Putative aminotransfera 78.2 8.7 0.0003 37.1 9.4 104 214-322 104-220 (437)
40 3idf_A USP-like protein; unive 76.9 6.9 0.00024 31.4 7.1 61 259-323 72-137 (138)
41 2yvq_A Carbamoyl-phosphate syn 76.7 12 0.0004 31.8 8.7 93 214-322 24-130 (143)
42 2o8r_A Polyphosphate kinase; s 76.6 2.6 8.8E-05 45.5 5.4 47 226-272 384-432 (705)
43 3h14_A Aminotransferase, class 75.9 15 0.00052 34.8 10.3 102 214-322 90-199 (391)
44 1kmj_A Selenocysteine lyase; p 75.5 53 0.0018 30.7 14.2 101 216-322 86-199 (406)
45 1eg5_A Aminotransferase; PLP-d 75.2 51 0.0018 30.5 13.7 99 216-322 62-176 (384)
46 3fdx_A Putative filament prote 75.2 24 0.00083 28.1 10.1 36 283-323 106-142 (143)
47 2yva_A DNAA initiator-associat 74.4 41 0.0014 28.9 12.7 35 256-290 126-163 (196)
48 1k6d_A Acetate COA-transferase 74.3 8.6 0.0003 35.1 7.7 43 283-331 148-194 (220)
49 2yv1_A Succinyl-COA ligase [AD 74.2 3.8 0.00013 39.1 5.5 105 215-321 70-178 (294)
50 2bfw_A GLGA glycogen synthase; 74.2 14 0.00048 31.3 8.7 99 214-323 34-145 (200)
51 3ruf_A WBGU; rossmann fold, UD 73.3 12 0.00039 35.2 8.6 109 215-326 24-151 (351)
52 1jw9_B Molybdopterin biosynthe 72.0 15 0.0005 33.9 8.8 107 207-324 23-153 (249)
53 1qz9_A Kynureninase; kynurenin 71.8 21 0.00072 34.0 10.2 100 216-322 89-200 (416)
54 1oi7_A Succinyl-COA synthetase 70.8 4.6 0.00016 38.4 5.2 105 215-321 64-172 (288)
55 1jeo_A MJ1247, hypothetical pr 70.7 43 0.0015 28.3 11.1 38 253-291 96-133 (180)
56 3kax_A Aminotransferase, class 70.2 19 0.00066 33.7 9.4 101 215-322 82-194 (383)
57 1vim_A Hypothetical protein AF 70.2 29 0.00099 30.4 10.0 37 254-290 104-140 (200)
58 3llv_A Exopolyphosphatase-rela 70.1 22 0.00076 28.8 8.7 90 216-322 6-100 (141)
59 3sho_A Transcriptional regulat 70.0 37 0.0013 28.9 10.5 38 254-291 102-139 (187)
60 2gn4_A FLAA1 protein, UDP-GLCN 69.9 11 0.00037 36.0 7.6 111 215-328 20-144 (344)
61 3dfz_A SIRC, precorrin-2 dehyd 69.8 5.1 0.00017 36.9 5.0 93 215-324 30-122 (223)
62 2dr1_A PH1308 protein, 386AA l 69.7 38 0.0013 31.5 11.4 97 218-322 74-181 (386)
63 1svv_A Threonine aldolase; str 69.4 15 0.0005 34.0 8.2 102 215-322 66-182 (359)
64 1m3s_A Hypothetical protein YC 69.1 28 0.00097 29.7 9.6 38 253-290 93-130 (186)
65 2z61_A Probable aspartate amin 69.0 24 0.00083 33.1 9.9 98 214-322 88-188 (370)
66 1qyd_A Pinoresinol-lariciresin 68.7 14 0.00046 34.0 7.8 103 216-323 4-114 (313)
67 2yv2_A Succinyl-COA synthetase 68.1 4.8 0.00017 38.4 4.7 104 216-321 72-179 (297)
68 3c85_A Putative glutathione-re 68.1 24 0.00082 30.0 8.9 86 216-317 39-130 (183)
69 2h1q_A Hypothetical protein; Z 67.9 13 0.00045 35.2 7.6 89 214-332 139-227 (270)
70 1elu_A L-cysteine/L-cystine C- 67.9 53 0.0018 30.6 12.0 113 200-322 63-193 (390)
71 3qhx_A Cystathionine gamma-syn 67.7 20 0.00068 34.6 9.1 98 217-322 83-186 (392)
72 3fdb_A Beta C-S lyase, putativ 67.5 25 0.00084 32.9 9.5 102 214-322 80-188 (377)
73 1jmv_A USPA, universal stress 67.4 34 0.0012 27.2 9.2 59 261-325 72-138 (141)
74 3cdk_A Succinyl-COA:3-ketoacid 66.6 26 0.00088 32.4 9.2 44 283-332 151-198 (241)
75 2xhz_A KDSD, YRBH, arabinose 5 66.1 33 0.0011 29.1 9.4 39 253-291 110-148 (183)
76 2z08_A Universal stress protei 66.1 48 0.0016 26.3 10.8 37 283-323 99-136 (137)
77 3kgw_A Alanine-glyoxylate amin 65.7 29 0.001 32.4 9.7 97 218-322 77-183 (393)
78 2nu8_A Succinyl-COA ligase [AD 65.6 5.6 0.00019 37.7 4.5 105 215-321 64-172 (288)
79 3isl_A Purine catabolism prote 65.2 85 0.0029 29.5 13.0 97 218-322 64-171 (416)
80 2gm3_A Unknown protein; AT3G01 64.8 22 0.00075 29.8 7.8 48 283-334 124-172 (175)
81 4eb5_A Probable cysteine desul 64.6 89 0.003 28.9 14.4 97 216-319 61-170 (382)
82 2wm3_A NMRA-like family domain 64.3 17 0.00058 33.3 7.5 108 216-327 5-116 (299)
83 1yaa_A Aspartate aminotransfer 64.3 45 0.0015 31.8 10.8 102 215-322 96-214 (412)
84 2gas_A Isoflavone reductase; N 63.7 15 0.00051 33.6 7.0 99 216-323 2-110 (307)
85 3tnj_A Universal stress protei 63.6 36 0.0012 27.4 8.7 39 283-325 109-147 (150)
86 2huf_A Alanine glyoxylate amin 63.5 35 0.0012 32.0 9.8 98 217-322 72-179 (393)
87 1y8q_A Ubiquitin-like 1 activa 63.5 70 0.0024 30.9 12.1 109 205-323 26-156 (346)
88 1qyc_A Phenylcoumaran benzylic 63.4 15 0.0005 33.7 6.9 99 216-323 4-111 (308)
89 3cvj_A Putative phosphoheptose 63.2 49 0.0017 29.7 10.4 38 252-289 121-169 (243)
90 2dum_A Hypothetical protein PH 63.2 12 0.00041 31.2 5.8 62 260-325 85-156 (170)
91 3ab8_A Putative uncharacterize 63.2 44 0.0015 29.8 10.0 99 218-323 157-267 (268)
92 3ndn_A O-succinylhomoserine su 62.7 31 0.0011 33.8 9.6 98 217-322 98-201 (414)
93 2zay_A Response regulator rece 62.5 27 0.00092 27.7 7.6 81 239-327 6-92 (147)
94 2pln_A HP1043, response regula 62.5 29 0.001 27.2 7.8 77 239-327 16-96 (137)
95 1tk9_A Phosphoheptose isomeras 62.4 68 0.0023 27.1 10.7 44 246-289 117-160 (188)
96 3loq_A Universal stress protei 62.2 49 0.0017 30.1 10.3 104 218-325 173-290 (294)
97 4egb_A DTDP-glucose 4,6-dehydr 62.1 13 0.00044 34.8 6.4 111 215-326 23-149 (346)
98 2r6j_A Eugenol synthase 1; phe 62.0 16 0.00056 33.7 7.0 97 217-323 12-113 (318)
99 2rjn_A Response regulator rece 62.0 30 0.001 27.8 7.9 80 240-327 6-89 (154)
100 2zc0_A Alanine glyoxylate tran 62.0 30 0.001 32.8 9.1 101 215-322 98-213 (407)
101 3ezs_A Aminotransferase ASPB; 61.9 42 0.0014 31.3 10.0 104 214-322 81-192 (376)
102 2bkw_A Alanine-glyoxylate amin 61.5 74 0.0025 29.4 11.6 99 216-322 60-174 (385)
103 3gt7_A Sensor protein; structu 61.4 29 0.00099 28.1 7.8 80 240-327 6-91 (154)
104 1o1y_A Conserved hypothetical 61.4 8 0.00027 35.5 4.6 87 239-325 10-101 (239)
105 3etn_A Putative phosphosugar i 61.3 23 0.00077 31.8 7.6 36 255-290 122-159 (220)
106 3mt0_A Uncharacterized protein 61.3 74 0.0025 28.9 11.4 95 228-329 24-132 (290)
107 4id9_A Short-chain dehydrogena 61.0 15 0.00052 34.3 6.7 99 215-326 18-126 (347)
108 2cb1_A O-acetyl homoserine sul 61.0 22 0.00075 34.4 8.0 97 217-322 73-175 (412)
109 2lpm_A Two-component response 60.9 9.8 0.00033 31.4 4.7 78 239-325 6-87 (123)
110 2i2w_A Phosphoheptose isomeras 60.8 86 0.003 27.5 13.0 34 256-289 148-181 (212)
111 2fp4_A Succinyl-COA ligase [GD 60.7 9.6 0.00033 36.5 5.2 105 215-321 71-180 (305)
112 1vjo_A Alanine--glyoxylate ami 60.6 29 0.00098 32.7 8.6 98 217-322 87-194 (393)
113 3fxa_A SIS domain protein; str 60.6 41 0.0014 29.2 9.0 35 256-290 109-143 (201)
114 1xr4_A Putative citrate lyase 60.4 35 0.0012 35.1 9.7 119 206-324 49-204 (509)
115 1lc5_A COBD, L-threonine-O-3-p 60.3 56 0.0019 30.4 10.6 98 216-322 77-184 (364)
116 2hj0_A Putative citrate lyase, 60.3 44 0.0015 34.5 10.4 116 208-324 54-207 (519)
117 1j32_A Aspartate aminotransfer 60.0 45 0.0015 31.3 9.9 101 215-322 90-201 (388)
118 2ctz_A O-acetyl-L-homoserine s 60.0 45 0.0015 32.4 10.1 99 217-322 75-179 (421)
119 3h5i_A Response regulator/sens 59.9 36 0.0012 26.9 7.9 80 241-327 5-88 (140)
120 1nri_A Hypothetical protein HI 59.9 84 0.0029 29.6 11.7 62 246-309 147-211 (306)
121 3dyd_A Tyrosine aminotransfera 59.7 38 0.0013 32.7 9.5 102 214-322 117-229 (427)
122 3gpi_A NAD-dependent epimerase 59.6 8.9 0.00031 35.0 4.6 47 280-326 59-109 (286)
123 3st7_A Capsular polysaccharide 59.6 18 0.00062 34.3 7.0 73 252-324 10-92 (369)
124 2q7w_A Aspartate aminotransfer 59.5 65 0.0022 30.2 11.0 102 215-322 92-210 (396)
125 2fr1_A Erythromycin synthase, 59.4 37 0.0013 34.3 9.7 112 213-326 223-361 (486)
126 3dhn_A NAD-dependent epimerase 59.4 24 0.00081 30.7 7.3 100 217-326 5-112 (227)
127 3m2p_A UDP-N-acetylglucosamine 59.0 19 0.00065 33.2 6.8 100 217-326 3-109 (311)
128 3npg_A Uncharacterized DUF364 58.9 19 0.00067 33.5 6.9 93 214-333 114-206 (249)
129 1ydm_A Hypothetical protein YQ 58.9 50 0.0017 29.0 9.3 103 200-307 23-139 (187)
130 3ri6_A O-acetylhomoserine sulf 58.8 46 0.0016 33.0 10.0 97 218-322 100-202 (430)
131 2x4g_A Nucleoside-diphosphate- 58.6 24 0.00084 32.6 7.6 103 217-326 14-126 (342)
132 3eod_A Protein HNR; response r 58.6 37 0.0013 26.2 7.7 79 241-327 7-89 (130)
133 2l10_A Talin-1; helical bundle 58.5 93 0.0032 27.1 11.6 87 108-194 6-109 (158)
134 1mjh_A Protein (ATP-binding do 58.2 24 0.00081 29.0 6.7 62 260-325 90-159 (162)
135 3e48_A Putative nucleoside-dip 58.0 11 0.00037 34.4 4.9 102 218-327 2-107 (289)
136 2w48_A Sorbitol operon regulat 58.0 13 0.00046 35.3 5.7 92 201-293 91-214 (315)
137 3i42_A Response regulator rece 57.9 38 0.0013 26.0 7.6 78 242-327 4-87 (127)
138 3trj_A Phosphoheptose isomeras 57.6 99 0.0034 27.1 12.1 37 253-289 128-167 (201)
139 2ch1_A 3-hydroxykynurenine tra 57.3 49 0.0017 31.0 9.6 98 217-322 71-178 (396)
140 3h2s_A Putative NADH-flavin re 57.2 26 0.0009 30.2 7.1 99 218-324 2-104 (224)
141 2yrr_A Aminotransferase, class 57.1 37 0.0013 31.0 8.5 96 217-322 54-159 (353)
142 1zgz_A Torcad operon transcrip 57.0 39 0.0013 25.7 7.5 77 243-327 4-83 (122)
143 3c1o_A Eugenol synthase; pheny 56.9 27 0.00091 32.2 7.5 99 216-323 4-111 (321)
144 3f6p_A Transcriptional regulat 56.9 37 0.0013 26.1 7.4 76 243-326 4-82 (120)
145 4ds3_A Phosphoribosylglycinami 56.8 33 0.0011 31.1 7.9 70 218-291 11-94 (209)
146 1qgn_A Protein (cystathionine 56.6 60 0.0021 32.3 10.6 98 217-322 131-235 (445)
147 3dzz_A Putative pyridoxal 5'-p 56.5 56 0.0019 30.5 9.8 101 215-322 85-198 (391)
148 3cnb_A DNA-binding response re 56.4 45 0.0015 25.9 7.9 80 240-327 7-94 (143)
149 1vp4_A Aminotransferase, putat 56.4 48 0.0016 31.9 9.5 103 214-322 108-226 (425)
150 1c7n_A Cystalysin; transferase 56.4 52 0.0018 31.0 9.6 101 215-322 89-202 (399)
151 3t6k_A Response regulator rece 56.4 46 0.0016 26.2 8.0 79 241-327 4-88 (136)
152 2j48_A Two-component sensor ki 56.4 38 0.0013 25.1 7.1 77 243-327 3-85 (119)
153 3cai_A Possible aminotransfera 56.3 1E+02 0.0035 28.9 11.8 99 216-322 87-200 (406)
154 1m32_A 2-aminoethylphosphonate 56.2 37 0.0013 31.2 8.4 98 217-322 58-166 (366)
155 3olq_A Universal stress protei 56.0 98 0.0034 28.2 11.3 65 258-326 233-306 (319)
156 2e7j_A SEP-tRNA:Cys-tRNA synth 55.9 84 0.0029 29.0 10.9 96 217-322 71-182 (371)
157 3ilh_A Two component response 55.9 31 0.0011 27.0 6.9 57 218-274 37-100 (146)
158 2jl1_A Triphenylmethane reduct 55.8 27 0.00092 31.5 7.2 102 218-326 2-107 (287)
159 3grc_A Sensor protein, kinase; 55.8 48 0.0016 25.9 8.0 79 241-327 6-90 (140)
160 3ftb_A Histidinol-phosphate am 55.6 36 0.0012 31.5 8.2 97 215-322 78-182 (361)
161 3olq_A Universal stress protei 55.5 69 0.0024 29.3 10.1 63 261-327 81-152 (319)
162 2g1u_A Hypothetical protein TM 55.5 48 0.0017 27.4 8.3 93 214-323 17-116 (155)
163 3jtx_A Aminotransferase; NP_28 55.5 27 0.00092 32.9 7.4 104 214-322 89-206 (396)
164 2ay1_A Aroat, aromatic amino a 55.5 62 0.0021 30.4 10.0 102 215-322 89-207 (394)
165 2rdm_A Response regulator rece 55.2 50 0.0017 25.4 7.9 80 241-327 5-89 (132)
166 2rfv_A Methionine gamma-lyase; 55.1 74 0.0025 30.2 10.6 97 217-322 81-184 (398)
167 2x5d_A Probable aminotransfera 55.0 59 0.002 30.9 9.9 100 216-322 100-210 (412)
168 3lvm_A Cysteine desulfurase; s 54.5 1.4E+02 0.0049 28.0 14.1 102 216-322 86-198 (423)
169 3cg0_A Response regulator rece 54.4 37 0.0013 26.4 7.1 82 239-327 7-92 (140)
170 3zrp_A Serine-pyruvate aminotr 54.3 49 0.0017 30.7 8.9 97 217-322 56-162 (384)
171 3gl9_A Response regulator; bet 54.3 46 0.0016 25.7 7.5 76 243-326 4-85 (122)
172 1zud_1 Adenylyltransferase THI 54.2 91 0.0031 28.5 10.6 109 206-324 19-150 (251)
173 4f4e_A Aromatic-amino-acid ami 54.1 79 0.0027 30.2 10.7 100 217-322 119-233 (420)
174 1ajs_A Aspartate aminotransfer 54.1 72 0.0025 30.2 10.3 105 214-322 96-221 (412)
175 3acz_A Methionine gamma-lyase; 54.0 40 0.0014 32.3 8.5 97 217-322 76-179 (389)
176 1n8p_A Cystathionine gamma-lya 54.0 49 0.0017 31.8 9.2 97 217-322 72-177 (393)
177 1fc4_A 2-amino-3-ketobutyrate 53.9 1.3E+02 0.0043 28.3 11.9 109 200-322 94-212 (401)
178 3tqr_A Phosphoribosylglycinami 53.9 50 0.0017 30.0 8.6 69 219-291 10-91 (215)
179 3lk7_A UDP-N-acetylmuramoylala 53.9 29 0.00099 34.6 7.6 72 215-291 8-80 (451)
180 3hdj_A Probable ornithine cycl 53.8 40 0.0014 32.2 8.3 88 214-307 119-215 (313)
181 3ke3_A Putative serine-pyruvat 53.5 1.4E+02 0.0048 28.1 12.3 100 217-323 53-174 (379)
182 1e6u_A GDP-fucose synthetase; 53.3 27 0.00092 32.0 6.9 25 302-326 83-107 (321)
183 3l9w_A Glutathione-regulated p 53.1 52 0.0018 32.6 9.3 92 216-324 4-102 (413)
184 2z9v_A Aspartate aminotransfer 53.0 99 0.0034 28.8 10.9 99 216-322 60-169 (392)
185 2qxy_A Response regulator; reg 52.9 29 0.00099 27.3 6.2 79 241-328 4-86 (142)
186 3fg9_A Protein of universal st 52.3 92 0.0031 25.1 10.7 103 217-323 17-155 (156)
187 1byr_A Protein (endonuclease); 52.2 43 0.0015 27.5 7.3 49 225-273 39-88 (155)
188 3nra_A Aspartate aminotransfer 52.2 48 0.0017 31.2 8.6 100 216-322 103-217 (407)
189 3hdv_A Response regulator; PSI 52.1 50 0.0017 25.7 7.5 80 240-327 6-91 (136)
190 1sb8_A WBPP; epimerase, 4-epim 52.0 61 0.0021 30.2 9.2 110 215-326 26-153 (352)
191 3rht_A (gatase1)-like protein; 51.9 8.9 0.0003 36.1 3.3 82 242-330 5-92 (259)
192 1bw0_A TAT, protein (tyrosine 51.8 69 0.0024 30.4 9.8 102 214-322 103-215 (416)
193 1u08_A Hypothetical aminotrans 51.7 1E+02 0.0035 28.8 10.9 99 217-322 93-201 (386)
194 3s2u_A UDP-N-acetylglucosamine 51.7 84 0.0029 29.9 10.4 94 215-324 179-279 (365)
195 3enk_A UDP-glucose 4-epimerase 51.6 65 0.0022 29.7 9.3 109 215-326 4-129 (341)
196 3l5o_A Uncharacterized protein 51.6 31 0.0011 32.7 7.0 89 214-332 139-227 (270)
197 2fq6_A Cystathionine beta-lyas 51.3 43 0.0015 32.9 8.3 98 217-322 99-204 (415)
198 1bs0_A Protein (8-amino-7-oxon 51.3 1.5E+02 0.0053 27.4 13.4 110 200-322 88-203 (384)
199 1jkx_A GART;, phosphoribosylgl 51.3 51 0.0017 29.8 8.2 69 218-290 4-86 (212)
200 3cg4_A Response regulator rece 51.2 42 0.0014 26.2 6.9 79 240-326 6-90 (142)
201 1hdo_A Biliverdin IX beta redu 51.1 33 0.0011 28.9 6.7 104 217-327 4-112 (206)
202 2ahu_A Putative enzyme YDIF; C 51.1 1.7E+02 0.0058 30.1 13.1 44 283-326 180-228 (531)
203 1qkk_A DCTD, C4-dicarboxylate 51.1 49 0.0017 26.5 7.4 79 241-327 3-85 (155)
204 2zcu_A Uncharacterized oxidore 51.1 47 0.0016 29.7 8.0 100 218-326 1-104 (286)
205 3fsl_A Aromatic-amino-acid ami 50.9 1.3E+02 0.0044 28.1 11.4 100 217-322 97-211 (397)
206 2z5l_A Tylkr1, tylactone synth 50.9 50 0.0017 33.7 9.0 111 214-326 257-391 (511)
207 2hmt_A YUAA protein; RCK, KTN, 50.1 56 0.0019 25.8 7.6 91 216-322 6-101 (144)
208 3cis_A Uncharacterized protein 50.0 1.2E+02 0.0041 27.7 10.9 59 266-328 100-164 (309)
209 2qzj_A Two-component response 50.0 57 0.002 25.6 7.6 79 241-327 4-85 (136)
210 3kht_A Response regulator; PSI 49.9 85 0.0029 24.6 8.7 79 241-327 5-91 (144)
211 3ip3_A Oxidoreductase, putativ 49.9 30 0.001 32.8 6.7 69 218-291 4-75 (337)
212 3kcq_A Phosphoribosylglycinami 49.9 38 0.0013 30.8 7.1 69 218-290 12-89 (215)
213 1i4n_A Indole-3-glycerol phosp 49.9 8.3 0.00028 36.2 2.7 99 287-391 120-221 (251)
214 1gc0_A Methionine gamma-lyase; 49.8 84 0.0029 30.0 10.0 97 217-322 82-185 (398)
215 2a9o_A Response regulator; ess 49.7 72 0.0025 23.8 7.9 77 243-327 3-82 (120)
216 2jba_A Phosphate regulon trans 49.4 51 0.0018 25.1 7.0 78 242-327 3-86 (127)
217 2ord_A Acoat, acetylornithine 49.4 1.3E+02 0.0044 28.3 11.2 105 212-322 94-222 (397)
218 3rui_A Ubiquitin-like modifier 49.3 1.4E+02 0.0049 29.0 11.5 105 216-331 34-176 (340)
219 1ex2_A Protein MAF; structural 49.1 24 0.0008 31.7 5.4 88 223-322 9-103 (189)
220 3m6m_D Sensory/regulatory prot 49.1 35 0.0012 27.3 6.2 79 240-326 13-99 (143)
221 3nmy_A Xometc, cystathionine g 49.0 43 0.0015 32.6 7.9 96 217-322 84-187 (400)
222 7aat_A Aspartate aminotransfer 48.8 1.1E+02 0.0036 28.9 10.5 101 215-322 94-213 (401)
223 4ggj_A Mitochondrial cardiolip 48.7 20 0.00068 31.7 4.9 56 218-274 63-119 (196)
224 1yiz_A Kynurenine aminotransfe 48.7 89 0.003 29.8 10.0 99 217-322 103-220 (429)
225 1pjq_A CYSG, siroheme synthase 48.7 47 0.0016 33.3 8.3 96 215-326 11-106 (457)
226 3l8a_A METC, putative aminotra 48.7 90 0.0031 29.8 10.1 101 215-322 119-232 (421)
227 3asa_A LL-diaminopimelate amin 48.5 67 0.0023 30.5 9.1 101 214-322 94-201 (400)
228 3f9t_A TDC, L-tyrosine decarbo 48.4 1.1E+02 0.0038 28.2 10.4 100 215-322 86-206 (397)
229 1vl0_A DTDP-4-dehydrorhamnose 48.1 25 0.00084 31.9 5.6 91 216-325 12-113 (292)
230 1v2d_A Glutamine aminotransfer 48.0 80 0.0028 29.5 9.4 100 216-322 79-190 (381)
231 3ly1_A Putative histidinol-pho 47.9 38 0.0013 31.3 7.0 98 215-322 68-178 (354)
232 3vps_A TUNA, NAD-dependent epi 47.6 17 0.00057 33.3 4.4 25 302-326 95-119 (321)
233 1xq6_A Unknown protein; struct 47.5 42 0.0014 29.2 6.9 106 215-326 3-133 (253)
234 3frk_A QDTB; aminotransferase, 47.4 22 0.00076 33.4 5.4 98 213-322 49-156 (373)
235 1gd9_A Aspartate aminotransfer 47.4 82 0.0028 29.5 9.4 102 214-322 85-198 (389)
236 3cwc_A Putative glycerate kina 47.3 16 0.00056 36.4 4.4 61 254-328 270-330 (383)
237 3osu_A 3-oxoacyl-[acyl-carrier 47.1 30 0.001 30.9 6.0 106 216-324 4-139 (246)
238 1b93_A Protein (methylglyoxal 47.0 51 0.0017 28.6 7.1 73 241-324 39-120 (152)
239 1lss_A TRK system potassium up 46.9 72 0.0025 25.0 7.7 89 216-320 4-97 (140)
240 3a2b_A Serine palmitoyltransfe 46.9 97 0.0033 29.1 9.9 97 216-322 104-208 (398)
241 3ele_A Amino transferase; RER0 46.8 1.1E+02 0.0037 28.7 10.2 103 214-322 98-216 (398)
242 1e5e_A MGL, methionine gamma-l 46.7 1.5E+02 0.0052 28.3 11.5 98 217-322 79-183 (404)
243 4b8w_A GDP-L-fucose synthase; 46.7 31 0.0011 31.1 6.0 27 301-327 88-114 (319)
244 2gkg_A Response regulator homo 46.7 58 0.002 24.6 6.9 77 242-326 6-88 (127)
245 2aef_A Calcium-gated potassium 46.4 34 0.0012 30.3 6.2 91 216-325 9-106 (234)
246 4adb_A Succinylornithine trans 46.3 1.5E+02 0.0051 27.7 11.1 102 216-322 97-222 (406)
247 3hvy_A Cystathionine beta-lyas 46.2 40 0.0014 33.5 7.2 95 221-322 98-217 (427)
248 4b4o_A Epimerase family protei 46.1 44 0.0015 30.5 7.0 44 276-319 44-99 (298)
249 3hv2_A Response regulator/HD d 46.0 44 0.0015 26.8 6.3 80 240-327 13-96 (153)
250 3b46_A Aminotransferase BNA3; 46.0 76 0.0026 30.8 9.2 100 216-322 119-239 (447)
251 2nvv_A Acetyl-COA hydrolase/tr 45.8 39 0.0013 34.8 7.2 97 207-303 9-139 (506)
252 3eag_A UDP-N-acetylmuramate:L- 45.7 71 0.0024 30.2 8.7 89 217-322 5-95 (326)
253 3nbm_A PTS system, lactose-spe 45.7 18 0.00062 29.4 3.8 53 263-324 31-85 (108)
254 3i16_A Aluminum resistance pro 45.7 48 0.0016 33.0 7.7 96 221-322 97-217 (427)
255 3hdg_A Uncharacterized protein 45.6 42 0.0014 26.1 6.0 81 240-328 6-90 (137)
256 1fmc_A 7 alpha-hydroxysteroid 45.5 1.2E+02 0.0042 26.5 9.8 108 215-326 10-146 (255)
257 3ffh_A Histidinol-phosphate am 45.5 59 0.002 30.1 8.0 98 215-322 84-192 (363)
258 1xhf_A DYE resistance, aerobic 45.5 92 0.0032 23.5 8.0 76 243-326 5-83 (123)
259 2zyj_A Alpha-aminodipate amino 45.3 76 0.0026 29.9 8.9 102 215-322 91-201 (397)
260 1id1_A Putative potassium chan 45.2 1.2E+02 0.004 24.8 9.0 100 216-327 3-108 (153)
261 3ew7_A LMO0794 protein; Q8Y8U8 45.1 49 0.0017 28.2 6.9 99 218-326 2-103 (221)
262 1mvo_A PHOP response regulator 45.0 76 0.0026 24.5 7.5 77 243-327 5-85 (136)
263 4e4t_A Phosphoribosylaminoimid 45.0 19 0.00064 35.7 4.5 77 212-294 31-107 (419)
264 1tq8_A Hypothetical protein RV 44.9 1.3E+02 0.0045 24.8 10.1 62 259-324 87-157 (163)
265 2g39_A Acetyl-COA hydrolase; c 44.9 47 0.0016 34.1 7.6 94 208-303 20-144 (497)
266 3aow_A Putative uncharacterize 44.8 84 0.0029 30.7 9.3 102 215-322 140-255 (448)
267 1jbe_A Chemotaxis protein CHEY 44.8 83 0.0028 23.9 7.6 80 239-326 2-88 (128)
268 1meo_A Phosophoribosylglycinam 44.8 60 0.0021 29.2 7.6 52 218-273 4-57 (209)
269 1v4v_A UDP-N-acetylglucosamine 44.7 1.2E+02 0.0041 28.1 10.0 69 239-323 228-299 (376)
270 3nnk_A Ureidoglycine-glyoxylat 44.5 2E+02 0.0068 26.8 11.7 96 219-322 67-173 (411)
271 2z1d_A Hydrogenase expression/ 44.4 24 0.00082 35.0 5.1 50 271-324 178-227 (372)
272 3oy2_A Glycosyltransferase B73 44.4 34 0.0012 32.4 6.2 98 216-323 184-303 (413)
273 3e2y_A Kynurenine-oxoglutarate 44.4 83 0.0028 29.6 8.9 100 216-322 86-205 (410)
274 3g7q_A Valine-pyruvate aminotr 44.3 37 0.0013 32.2 6.4 107 213-322 96-218 (417)
275 3snk_A Response regulator CHEY 44.3 29 0.001 27.2 4.9 81 239-327 12-97 (135)
276 2xbl_A Phosphoheptose isomeras 44.1 1.5E+02 0.005 25.2 11.6 37 254-290 131-167 (198)
277 3uwc_A Nucleotide-sugar aminot 44.1 50 0.0017 30.8 7.2 95 212-322 50-157 (374)
278 4dik_A Flavoprotein; TM0755, e 44.1 1.1E+02 0.0037 30.3 10.0 84 243-329 267-363 (410)
279 2dou_A Probable N-succinyldiam 44.1 94 0.0032 28.9 9.2 99 217-322 89-196 (376)
280 3nhm_A Response regulator; pro 44.0 1.1E+02 0.0036 23.5 8.4 56 215-275 26-86 (133)
281 3k6m_A Succinyl-COA:3-ketoacid 44.0 32 0.0011 35.2 6.2 99 199-302 260-373 (481)
282 3fro_A GLGA glycogen synthase; 44.0 1.1E+02 0.0037 28.7 9.6 99 214-323 249-360 (439)
283 1iay_A ACC synthase 2, 1-amino 43.9 81 0.0028 30.1 8.9 102 214-322 107-226 (428)
284 2amh_A Septum formation protei 43.9 36 0.0012 30.9 5.9 94 223-323 16-123 (207)
285 1zh2_A KDP operon transcriptio 43.8 82 0.0028 23.5 7.4 77 243-327 3-82 (121)
286 3nhm_A Response regulator; pro 43.8 57 0.002 25.1 6.5 77 241-326 4-86 (133)
287 2o1b_A Aminotransferase, class 43.4 72 0.0025 30.4 8.4 100 216-322 110-219 (404)
288 3i4j_A Aminotransferase, class 43.4 45 0.0016 32.0 7.0 105 216-322 90-230 (430)
289 3d3u_A 4-hydroxybutyrate COA-t 43.2 27 0.00094 35.0 5.5 117 207-326 15-158 (439)
290 3jzl_A Putative cystathionine 43.0 83 0.0028 30.9 8.9 95 221-322 83-200 (409)
291 2dgk_A GAD-beta, GADB, glutama 43.0 2E+02 0.0069 27.7 11.8 97 218-322 106-228 (452)
292 3rsc_A CALG2; TDP, enediyne, s 42.9 62 0.0021 30.7 7.8 21 308-328 131-151 (415)
293 3beo_A UDP-N-acetylglucosamine 42.9 1.1E+02 0.0038 28.2 9.4 69 239-323 236-307 (375)
294 1d2f_A MALY protein; aminotran 42.9 1.2E+02 0.004 28.4 9.7 101 215-322 87-200 (390)
295 1pff_A Methionine gamma-lyase; 42.7 1.3E+02 0.0045 27.3 9.9 97 217-322 15-119 (331)
296 2p5x_A ASMTL, N-acetylserotoni 42.6 35 0.0012 31.5 5.7 90 223-322 10-112 (230)
297 3hzh_A Chemotaxis response reg 42.6 53 0.0018 26.6 6.3 81 239-327 34-121 (157)
298 3orq_A N5-carboxyaminoimidazol 42.5 55 0.0019 31.5 7.4 73 212-294 8-84 (377)
299 3if2_A Aminotransferase; YP_26 42.4 14 0.00049 35.7 3.2 107 214-322 105-244 (444)
300 3vax_A Putative uncharacterize 42.4 2.1E+02 0.0072 26.5 13.9 101 216-322 81-194 (400)
301 2r2n_A Kynurenine/alpha-aminoa 42.4 1.7E+02 0.0057 28.0 10.9 100 217-322 110-229 (425)
302 4dad_A Putative pilus assembly 42.3 42 0.0015 26.5 5.6 81 239-327 18-105 (146)
303 3rft_A Uronate dehydrogenase; 42.1 36 0.0012 30.8 5.7 99 216-326 3-111 (267)
304 3rq1_A Aminotransferase class 42.1 1.2E+02 0.0041 28.8 9.7 100 217-322 104-224 (418)
305 3tqx_A 2-amino-3-ketobutyrate 42.1 1.9E+02 0.0064 26.8 11.0 96 217-322 105-210 (399)
306 2pl1_A Transcriptional regulat 42.0 72 0.0024 24.0 6.7 76 243-326 2-81 (121)
307 3cis_A Uncharacterized protein 42.0 2E+02 0.0069 26.1 12.5 105 217-325 173-306 (309)
308 3sc6_A DTDP-4-dehydrorhamnose 41.9 40 0.0014 30.4 6.0 26 301-326 82-107 (287)
309 1ek6_A UDP-galactose 4-epimera 41.9 1E+02 0.0035 28.4 9.0 109 216-326 2-132 (348)
310 4a6r_A Omega transaminase; tra 41.6 1E+02 0.0036 30.0 9.4 105 216-322 112-258 (459)
311 4dqv_A Probable peptide synthe 41.6 63 0.0021 32.2 7.9 111 214-326 71-214 (478)
312 3h1g_A Chemotaxis protein CHEY 41.5 88 0.003 24.1 7.3 78 241-326 5-90 (129)
313 3ia7_A CALG4; glycosysltransfe 41.4 64 0.0022 30.2 7.6 21 308-328 115-135 (402)
314 2qvg_A Two component response 41.4 58 0.002 25.4 6.3 80 240-327 6-99 (143)
315 1o4s_A Aspartate aminotransfer 41.2 1.1E+02 0.0038 28.8 9.3 101 215-322 101-212 (389)
316 3f0h_A Aminotransferase; RER07 41.1 1.6E+02 0.0054 27.1 10.3 98 217-322 72-179 (376)
317 3auf_A Glycinamide ribonucleot 41.1 95 0.0032 28.3 8.4 53 218-273 24-79 (229)
318 3mt0_A Uncharacterized protein 40.8 1.8E+02 0.006 26.2 10.3 41 282-326 236-277 (290)
319 3lte_A Response regulator; str 40.6 1.2E+02 0.004 23.2 7.9 51 241-292 6-59 (132)
320 3ez1_A Aminotransferase MOCR f 40.6 84 0.0029 29.9 8.4 105 214-322 86-212 (423)
321 2okj_A Glutamate decarboxylase 40.4 1.4E+02 0.0049 29.4 10.3 103 215-322 151-280 (504)
322 1gy8_A UDP-galactose 4-epimera 40.2 63 0.0022 30.6 7.4 109 216-326 2-144 (397)
323 1lnq_A MTHK channels, potassiu 40.1 43 0.0015 31.6 6.1 91 216-324 115-209 (336)
324 1xq1_A Putative tropinone redu 39.9 1.2E+02 0.004 26.9 8.8 106 215-324 13-149 (266)
325 1ka9_H Imidazole glycerol phos 39.9 82 0.0028 27.4 7.5 76 243-328 4-86 (200)
326 3hh1_A Tetrapyrrole methylase 39.8 65 0.0022 25.8 6.4 44 228-273 69-115 (117)
327 3ps9_A TRNA 5-methylaminomethy 39.6 58 0.002 34.0 7.5 62 211-274 207-303 (676)
328 1cs1_A CGS, protein (cystathio 39.5 2.2E+02 0.0074 26.7 11.1 97 217-322 69-172 (386)
329 3qvo_A NMRA family protein; st 39.5 78 0.0027 27.8 7.4 99 216-326 23-125 (236)
330 2xci_A KDO-transferase, 3-deox 39.4 89 0.003 29.9 8.3 75 238-322 222-307 (374)
331 3qli_A Coenzyme A transferase; 39.3 38 0.0013 34.5 5.8 96 206-302 29-159 (455)
332 4ffc_A 4-aminobutyrate aminotr 39.2 56 0.0019 32.1 7.0 104 216-322 126-264 (453)
333 2pb2_A Acetylornithine/succiny 39.2 2.6E+02 0.0088 26.7 11.7 102 216-322 115-240 (420)
334 3oks_A 4-aminobutyrate transam 39.0 1.4E+02 0.0049 29.0 9.9 103 217-322 124-266 (451)
335 3p9x_A Phosphoribosylglycinami 39.0 84 0.0029 28.5 7.6 69 218-290 6-88 (211)
336 2oas_A ATOA, 4-hydroxybutyrate 39.0 16 0.00054 36.9 2.9 96 207-302 10-129 (436)
337 3r0j_A Possible two component 38.8 95 0.0032 27.4 7.9 80 240-327 22-105 (250)
338 3cog_A Cystathionine gamma-lya 38.7 87 0.003 30.2 8.2 96 217-322 84-187 (403)
339 3vh1_A Ubiquitin-like modifier 38.1 1.8E+02 0.0063 30.5 10.9 100 216-324 327-464 (598)
340 1k68_A Phytochrome response re 38.0 1.2E+02 0.004 23.2 7.6 78 242-327 3-95 (140)
341 3eh7_A 4-hydroxybutyrate COA-t 37.9 29 0.00098 35.0 4.6 112 208-322 20-157 (434)
342 3nyt_A Aminotransferase WBPE; 37.8 62 0.0021 30.3 6.8 95 213-322 48-155 (367)
343 3ruy_A Ornithine aminotransfer 37.8 1.7E+02 0.0057 27.4 9.9 105 215-322 93-221 (392)
344 1orr_A CDP-tyvelose-2-epimeras 37.8 96 0.0033 28.4 8.1 105 218-325 3-124 (347)
345 1qg8_A Protein (spore coat pol 37.8 82 0.0028 27.5 7.3 80 218-298 6-104 (255)
346 2vsy_A XCC0866; transferase, g 37.6 2.2E+02 0.0076 28.1 11.3 99 215-325 375-484 (568)
347 3jyo_A Quinate/shikimate dehyd 37.6 1E+02 0.0035 28.8 8.3 73 215-289 126-200 (283)
348 1iug_A Putative aspartate amin 37.6 1.4E+02 0.0048 27.1 9.1 99 216-322 52-158 (352)
349 1k66_A Phytochrome response re 37.5 98 0.0033 24.0 7.1 80 240-327 5-102 (149)
350 2b4a_A BH3024; flavodoxin-like 37.4 1.2E+02 0.0042 23.4 7.6 80 239-326 13-98 (138)
351 2lpm_A Two-component response 37.3 22 0.00077 29.2 3.2 53 216-273 32-86 (123)
352 3mje_A AMPHB; rossmann fold, o 37.3 1.2E+02 0.004 30.9 9.1 109 217-326 240-375 (496)
353 3qp9_A Type I polyketide synth 37.0 72 0.0024 32.6 7.6 113 212-326 247-402 (525)
354 1yio_A Response regulatory pro 37.0 1E+02 0.0035 25.9 7.6 78 242-327 5-86 (208)
355 3kto_A Response regulator rece 36.8 73 0.0025 24.9 6.2 82 241-328 6-91 (136)
356 3ffr_A Phosphoserine aminotran 36.7 1.6E+02 0.0054 26.8 9.3 95 217-322 63-166 (362)
357 3nzo_A UDP-N-acetylglucosamine 36.5 70 0.0024 31.0 7.1 110 216-327 35-166 (399)
358 4e7p_A Response regulator; DNA 36.4 1.2E+02 0.004 24.1 7.5 81 239-327 18-104 (150)
359 3ius_A Uncharacterized conserv 36.4 62 0.0021 29.0 6.4 22 305-326 80-103 (286)
360 2o0r_A RV0858C (N-succinyldiam 36.3 1.5E+02 0.0052 27.9 9.5 99 217-322 88-198 (411)
361 2hq1_A Glucose/ribitol dehydro 36.3 1.4E+02 0.0049 25.9 8.7 75 215-291 4-91 (247)
362 3oh8_A Nucleoside-diphosphate 36.2 1.1E+02 0.0037 30.8 8.7 97 216-326 147-254 (516)
363 3gk7_A 4-hydroxybutyrate COA-t 36.1 62 0.0021 32.8 6.8 95 207-302 15-134 (448)
364 3hn7_A UDP-N-acetylmuramate-L- 36.1 87 0.003 31.9 8.0 92 214-322 17-109 (524)
365 3slg_A PBGP3 protein; structur 36.0 21 0.00071 33.8 3.1 104 216-325 24-141 (372)
366 1tt5_A APPBP1, amyloid protein 36.0 3.7E+02 0.013 27.5 12.9 108 205-323 22-155 (531)
367 2ywr_A Phosphoribosylglycinami 35.9 1.6E+02 0.0055 26.3 9.0 51 220-273 7-58 (216)
368 3crn_A Response regulator rece 35.9 1.4E+02 0.0047 23.0 7.7 77 242-326 4-84 (132)
369 2ydy_A Methionine adenosyltran 35.7 75 0.0026 28.9 6.9 99 216-326 2-111 (315)
370 3rss_A Putative uncharacterize 35.6 3.3E+02 0.011 27.7 12.2 116 202-323 36-158 (502)
371 4f6c_A AUSA reductase domain p 35.6 57 0.0019 31.6 6.3 112 215-329 68-200 (427)
372 3mc6_A Sphingosine-1-phosphate 35.5 1.1E+02 0.0038 30.0 8.5 100 216-322 127-241 (497)
373 1vmd_A MGS, methylglyoxal synt 35.4 61 0.0021 28.9 5.8 100 216-326 28-138 (178)
374 1xi9_A Putative transaminase; 35.2 2.2E+02 0.0074 26.8 10.3 101 215-322 101-212 (406)
375 3rqi_A Response regulator prot 35.2 1E+02 0.0034 25.7 7.2 79 241-327 7-89 (184)
376 1smk_A Malate dehydrogenase, g 35.1 1.7E+02 0.0057 27.8 9.4 99 217-318 9-117 (326)
377 3ijr_A Oxidoreductase, short c 35.0 2.6E+02 0.009 25.4 10.7 100 215-316 46-171 (291)
378 1vgv_A UDP-N-acetylglucosamine 34.8 1.1E+02 0.0036 28.5 7.9 77 232-324 229-308 (384)
379 2qr3_A Two-component system re 34.7 71 0.0024 24.7 5.8 84 241-327 3-90 (140)
380 1b5p_A Protein (aspartate amin 34.6 1.5E+02 0.0051 27.8 9.0 101 215-322 91-202 (385)
381 2hqr_A Putative transcriptiona 34.6 96 0.0033 26.5 7.1 73 243-327 2-78 (223)
382 1g0o_A Trihydroxynaphthalene r 34.6 66 0.0023 29.3 6.3 106 215-323 28-161 (283)
383 3ehe_A UDP-glucose 4-epimerase 34.5 53 0.0018 30.0 5.6 99 218-326 3-114 (313)
384 1qo0_D AMIR; binding protein, 34.5 26 0.00088 29.7 3.2 78 240-327 11-89 (196)
385 3ot5_A UDP-N-acetylglucosamine 34.4 2.6E+02 0.0088 27.0 10.9 70 238-323 254-326 (403)
386 2r25_B Osmosensing histidine p 34.4 1.1E+02 0.0037 23.8 6.9 57 218-274 29-89 (133)
387 4gud_A Imidazole glycerol phos 34.4 22 0.00074 31.3 2.8 73 243-325 4-80 (211)
388 3e77_A Phosphoserine aminotran 34.4 33 0.0011 33.6 4.4 115 193-322 55-182 (377)
389 3l4e_A Uncharacterized peptida 34.4 45 0.0015 29.9 4.9 106 219-324 5-120 (206)
390 1edo_A Beta-keto acyl carrier 34.3 1.3E+02 0.0045 26.1 8.1 107 216-325 1-137 (244)
391 3av3_A Phosphoribosylglycinami 34.1 1.7E+02 0.0056 26.2 8.7 53 218-273 7-60 (212)
392 3fwz_A Inner membrane protein 34.0 1.1E+02 0.0038 24.7 7.0 93 216-325 7-106 (140)
393 3a9z_A Selenocysteine lyase; P 33.9 3.1E+02 0.01 25.9 13.8 34 200-235 65-98 (432)
394 3loq_A Universal stress protei 33.9 33 0.0011 31.3 4.0 67 259-329 92-166 (294)
395 3i5t_A Aminotransferase; pyrid 33.8 93 0.0032 30.8 7.7 104 217-322 116-260 (476)
396 3nkl_A UDP-D-quinovosamine 4-d 33.7 83 0.0029 25.2 6.2 99 216-330 4-105 (141)
397 2vyc_A Biodegradative arginine 33.6 94 0.0032 33.3 8.1 83 243-328 2-96 (755)
398 4gqb_A Protein arginine N-meth 33.6 51 0.0018 34.9 5.9 70 216-288 358-433 (637)
399 3da8_A Probable 5'-phosphoribo 33.5 80 0.0027 28.6 6.5 68 219-290 17-96 (215)
400 3ay3_A NAD-dependent epimerase 33.4 42 0.0014 30.1 4.6 98 217-326 3-110 (267)
401 3qm2_A Phosphoserine aminotran 33.3 53 0.0018 32.2 5.6 77 191-274 67-145 (386)
402 1fg7_A Histidinol phosphate am 33.2 1.5E+02 0.0053 27.5 8.8 53 216-273 76-128 (356)
403 3bcv_A Putative glycosyltransf 33.2 81 0.0028 27.2 6.4 56 218-273 10-66 (240)
404 2q1s_A Putative nucleotide sug 33.2 58 0.002 30.9 5.8 106 215-326 31-151 (377)
405 4e3z_A Putative oxidoreductase 33.1 1.7E+02 0.0059 26.1 8.9 99 214-314 24-148 (272)
406 2oat_A Ornithine aminotransfer 33.0 2.7E+02 0.0091 27.0 10.8 103 216-322 134-262 (439)
407 3cfy_A Putative LUXO repressor 33.0 1.2E+02 0.0041 23.7 6.9 76 243-326 6-85 (137)
408 3two_A Mannitol dehydrogenase; 32.9 1.9E+02 0.0067 27.0 9.5 55 212-274 173-227 (348)
409 4eu9_A Succinyl-COA:acetate co 32.9 86 0.0029 32.1 7.3 95 207-301 18-146 (514)
410 3ua3_A Protein arginine N-meth 32.8 74 0.0025 34.4 6.9 71 216-288 410-500 (745)
411 1mb3_A Cell division response 32.8 1.5E+02 0.0053 22.1 7.6 76 243-326 3-84 (124)
412 4gsl_A Ubiquitin-like modifier 32.7 2.1E+02 0.0073 30.1 10.4 105 216-331 326-468 (615)
413 1ys7_A Transcriptional regulat 32.6 1.5E+02 0.005 25.4 8.0 80 241-328 7-90 (233)
414 2gwr_A DNA-binding response re 32.6 1E+02 0.0035 26.8 7.0 78 242-327 6-86 (238)
415 2qbu_A Precorrin-2 methyltrans 32.6 87 0.003 27.8 6.6 49 231-280 86-137 (232)
416 4e5v_A Putative THUA-like prot 32.5 66 0.0022 30.3 5.9 78 239-324 2-93 (281)
417 1y1p_A ARII, aldehyde reductas 32.5 1.1E+02 0.0038 27.8 7.6 110 214-326 9-132 (342)
418 2c20_A UDP-glucose 4-epimerase 32.4 97 0.0033 28.3 7.1 103 217-326 2-118 (330)
419 2r85_A PURP protein PF1517; AT 32.4 88 0.003 28.8 6.8 29 243-274 4-32 (334)
420 1z7d_A Ornithine aminotransfer 32.4 3.2E+02 0.011 26.2 11.2 104 216-322 123-251 (433)
421 3sxp_A ADP-L-glycero-D-mannohe 32.3 93 0.0032 29.1 7.1 109 215-325 9-138 (362)
422 2oqr_A Sensory transduction pr 32.2 1.4E+02 0.0047 25.6 7.8 78 242-327 5-85 (230)
423 2x6t_A ADP-L-glycero-D-manno-h 32.1 86 0.003 29.2 6.8 106 216-325 46-163 (357)
424 2oga_A Transaminase; PLP-depen 32.0 2.6E+02 0.0089 26.3 10.3 99 212-322 75-183 (399)
425 3heb_A Response regulator rece 31.8 82 0.0028 25.0 5.8 58 218-275 32-98 (152)
426 4hvk_A Probable cysteine desul 31.8 2.9E+02 0.01 25.0 14.6 98 217-322 62-172 (382)
427 3ec7_A Putative dehydrogenase; 31.8 3.3E+02 0.011 25.7 12.6 111 217-331 24-152 (357)
428 3edm_A Short chain dehydrogena 31.8 1.7E+02 0.0057 26.2 8.5 100 215-316 7-132 (259)
429 3u9l_A 3-oxoacyl-[acyl-carrier 31.8 1.5E+02 0.0053 27.7 8.6 105 216-323 5-143 (324)
430 2w8t_A SPT, serine palmitoyltr 31.7 3.4E+02 0.012 25.8 12.4 96 217-322 126-229 (427)
431 3ppl_A Aspartate aminotransfer 31.7 2.6E+02 0.0088 26.5 10.3 98 214-322 94-220 (427)
432 3mz0_A Inositol 2-dehydrogenas 31.6 3.2E+02 0.011 25.4 11.5 110 218-332 4-132 (344)
433 1srr_A SPO0F, sporulation resp 31.6 1E+02 0.0034 23.3 6.1 77 243-327 5-85 (124)
434 3sho_A Transcriptional regulat 31.5 2.3E+02 0.0078 23.7 10.3 63 257-326 56-123 (187)
435 2ejb_A Probable aromatic acid 31.4 89 0.003 27.7 6.3 21 229-249 18-38 (189)
436 3c3m_A Response regulator rece 31.4 1.8E+02 0.0062 22.5 8.0 77 242-326 4-86 (138)
437 1q7r_A Predicted amidotransfer 31.3 67 0.0023 28.5 5.6 75 241-327 23-104 (219)
438 3ijp_A DHPR, dihydrodipicolina 31.3 67 0.0023 30.5 5.8 96 216-325 21-120 (288)
439 3m5u_A Phosphoserine aminotran 31.3 1.3E+02 0.0043 29.1 8.0 113 193-322 47-169 (361)
440 2a9v_A GMP synthase; structura 31.2 54 0.0019 29.1 4.9 79 241-324 13-92 (212)
441 2x5o_A UDP-N-acetylmuramoylala 31.1 35 0.0012 33.8 3.9 68 216-291 5-72 (439)
442 3f6c_A Positive transcription 31.1 66 0.0022 24.8 4.9 78 242-327 2-84 (134)
443 3jvi_A Protein tyrosine phosph 31.1 40 0.0014 29.0 3.9 68 223-290 16-90 (161)
444 3ab8_A Putative uncharacterize 31.1 1.3E+02 0.0045 26.6 7.6 44 281-328 107-152 (268)
445 2b69_A UDP-glucuronate decarbo 31.0 37 0.0013 31.7 3.9 107 216-326 27-142 (343)
446 3op7_A Aminotransferase class 31.0 1.5E+02 0.0052 27.4 8.3 101 215-322 81-192 (375)
447 4dmm_A 3-oxoacyl-[acyl-carrier 31.0 82 0.0028 28.6 6.3 96 215-313 27-148 (269)
448 3ndc_A Precorrin-4 C(11)-methy 31.0 1.7E+02 0.0058 26.9 8.5 62 212-274 47-112 (264)
449 3jte_A Response regulator rece 31.0 1.8E+02 0.006 22.5 7.6 79 240-326 2-86 (143)
450 3v2g_A 3-oxoacyl-[acyl-carrier 31.0 1.5E+02 0.0051 26.9 8.1 98 215-315 30-153 (271)
451 3cz5_A Two-component response 31.0 1E+02 0.0035 24.4 6.3 79 241-327 5-89 (153)
452 1ja9_A 4HNR, 1,3,6,8-tetrahydr 31.0 62 0.0021 28.8 5.3 98 215-315 20-143 (274)
453 2z1m_A GDP-D-mannose dehydrata 31.0 45 0.0015 30.7 4.5 108 216-326 3-127 (345)
454 3a10_A Response regulator; pho 30.9 1.6E+02 0.0055 21.7 8.0 76 243-326 3-82 (116)
455 1xdp_A Polyphosphate kinase; P 30.7 91 0.0031 33.3 7.3 48 225-273 378-428 (687)
456 2fnu_A Aminotransferase; prote 30.7 1.3E+02 0.0045 27.6 7.8 94 217-322 49-153 (375)
457 1iz0_A Quinone oxidoreductase; 30.7 2.2E+02 0.0074 26.0 9.2 52 213-271 123-175 (302)
458 2iss_D Glutamine amidotransfer 30.6 59 0.002 28.6 5.0 77 239-327 18-101 (208)
459 2ae2_A Protein (tropinone redu 30.6 2.6E+02 0.0088 24.7 9.5 108 215-326 8-146 (260)
460 2xhz_A KDSD, YRBH, arabinose 5 30.5 1.5E+02 0.0052 24.8 7.5 63 257-326 66-132 (183)
461 2c5a_A GDP-mannose-3', 5'-epim 30.5 62 0.0021 30.7 5.5 104 216-326 29-145 (379)
462 4da9_A Short-chain dehydrogena 30.5 1.6E+02 0.0055 26.7 8.2 76 215-292 28-116 (280)
463 2qsj_A DNA-binding response re 30.4 1.2E+02 0.0042 23.9 6.7 79 241-327 3-88 (154)
464 4hv4_A UDP-N-acetylmuramate--L 30.3 99 0.0034 31.2 7.2 89 215-322 21-110 (494)
465 1z45_A GAL10 bifunctional prot 30.0 2.9E+02 0.01 28.5 11.0 109 216-326 11-135 (699)
466 2jis_A Cysteine sulfinic acid 29.9 4.1E+02 0.014 26.2 11.8 101 215-322 165-294 (515)
467 3lua_A Response regulator rece 29.7 1.8E+02 0.0062 22.4 7.5 80 241-327 4-91 (140)
468 2ggs_A 273AA long hypothetical 29.6 51 0.0017 29.3 4.5 97 218-326 2-108 (273)
469 1kgs_A DRRD, DNA binding respo 29.6 1.7E+02 0.006 24.7 7.9 78 242-327 3-84 (225)
470 3kkj_A Amine oxidase, flavin-c 29.5 31 0.0011 28.9 2.8 29 243-273 4-32 (336)
471 2o0m_A Transcriptional regulat 29.5 77 0.0026 30.3 6.0 93 201-294 123-246 (345)
472 1oc2_A DTDP-glucose 4,6-dehydr 29.5 68 0.0023 29.6 5.5 109 217-325 5-125 (348)
473 1mdo_A ARNB aminotransferase; 29.4 1.7E+02 0.0059 27.1 8.4 94 216-322 55-159 (393)
474 1eq2_A ADP-L-glycero-D-mannohe 29.3 1.2E+02 0.0042 27.2 7.1 104 218-325 1-116 (310)
475 4ffl_A PYLC; amino acid, biosy 29.3 28 0.00096 33.1 2.8 68 217-294 2-74 (363)
476 3t18_A Aminotransferase class 29.2 2.2E+02 0.0074 26.8 9.2 100 217-322 103-223 (413)
477 4f6l_B AUSA reductase domain p 29.2 52 0.0018 32.9 4.9 108 215-324 149-277 (508)
478 3nx3_A Acoat, acetylornithine 29.0 3.4E+02 0.012 25.2 10.6 104 216-322 94-218 (395)
479 3dxv_A Alpha-amino-epsilon-cap 29.0 68 0.0023 30.9 5.6 104 216-322 105-240 (439)
480 2bwn_A 5-aminolevulinate synth 29.0 3.5E+02 0.012 25.1 13.8 71 243-322 134-213 (401)
481 3heb_A Response regulator rece 28.9 2E+02 0.0069 22.5 7.7 80 241-328 4-100 (152)
482 4iin_A 3-ketoacyl-acyl carrier 28.9 1.6E+02 0.0054 26.4 7.8 96 215-313 28-149 (271)
483 1s8n_A Putative antiterminator 28.7 1.7E+02 0.006 24.5 7.7 79 241-327 13-95 (205)
484 3tsa_A SPNG, NDP-rhamnosyltran 28.7 1.3E+02 0.0046 28.0 7.5 20 307-326 125-144 (391)
485 1f0k_A MURG, UDP-N-acetylgluco 28.6 2.5E+02 0.0085 25.6 9.3 90 217-323 184-280 (364)
486 1xdp_A Polyphosphate kinase; P 28.5 34 0.0012 36.6 3.5 62 212-276 334-402 (687)
487 3mm4_A Histidine kinase homolo 28.5 1.8E+02 0.006 24.9 7.7 79 240-326 60-160 (206)
488 3kcn_A Adenylate cyclase homol 28.4 1.4E+02 0.0046 23.7 6.6 56 215-274 26-84 (151)
489 2pzm_A Putative nucleotide sug 28.3 88 0.003 28.9 6.0 105 215-326 19-136 (330)
490 3r5x_A D-alanine--D-alanine li 28.2 41 0.0014 30.9 3.7 42 254-295 23-67 (307)
491 3rkr_A Short chain oxidoreduct 28.1 2.7E+02 0.0094 24.6 9.3 109 215-326 28-166 (262)
492 3awd_A GOX2181, putative polyo 28.1 3E+02 0.01 24.0 9.5 107 215-324 12-148 (260)
493 4g65_A TRK system potassium up 28.1 1E+02 0.0034 30.9 6.8 110 210-323 203-331 (461)
494 3lou_A Formyltetrahydrofolate 28.1 1.9E+02 0.0065 27.4 8.4 67 218-290 99-178 (292)
495 1s4d_A Uroporphyrin-III C-meth 28.0 1.1E+02 0.0036 28.5 6.5 46 228-274 81-128 (280)
496 3jx9_A Putative phosphoheptose 28.0 47 0.0016 29.2 3.8 34 212-245 74-110 (170)
497 3trj_A Phosphoheptose isomeras 28.0 3E+02 0.01 23.9 11.7 40 280-326 111-150 (201)
498 3dzc_A UDP-N-acetylglucosamine 27.9 2.1E+02 0.0071 27.5 8.9 69 239-323 261-332 (396)
499 3fxa_A SIS domain protein; str 27.7 67 0.0023 27.7 4.8 63 257-326 62-128 (201)
500 3u5t_A 3-oxoacyl-[acyl-carrier 27.6 66 0.0022 29.3 4.9 98 214-314 25-148 (267)
No 1
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=100.00 E-value=8.2e-74 Score=564.08 Aligned_cols=300 Identities=45% Similarity=0.712 Sum_probs=264.1
Q ss_pred chhhHHHHHHHHh-cCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHhhc
Q 016064 95 RAFSVIDEFNNWR-KQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTS 173 (396)
Q Consensus 95 ~~~~vI~~~~~~l-~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aRPt~v~L~na~~~f~r~i~r~~ 173 (396)
.+|++++.|++++ .+|++++++||+++|.++++.++++|.+||.+.|+.+++.|.++|| +++|.||+++|+|++.+..
T Consensus 2 ~~~div~~f~~~l~~d~~~s~aiAAi~aL~~~l~~s~~~T~~el~~~l~~a~~~L~~~r~-avsl~~a~~~~~~~i~~~~ 80 (315)
T 3ecs_A 2 DDKELIEYFKSQMKEDPDMASAVAAIRTLLEFLKRDKGETIQGLRANLTSAIETLCGVDS-SVAVSSGGELFLRFISLAS 80 (315)
T ss_dssp CHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCC----CHHHHHHHHHHHTTTTTSC-CHHHHHHHHHHHHHCC---
T ss_pred chhhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCC-CccHHHHHHHHHHHHHHhh
Confidence 4699999999998 8999999999999999999999999999999999999999999996 8899999999999986432
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCc
Q 016064 174 ALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDR 253 (396)
Q Consensus 174 ~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~ 253 (396)
.+..+++++|+.|++.++.|.+++..++++|+++|.++|++|++|||||+|++|+++|+.|+++||+|+|||+||||.+
T Consensus 81 -~~~~~~~~~k~~l~~~~~~~~~~~~~a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~ 159 (315)
T 3ecs_A 81 -LEYSDYSKCKKIMIERGELFLRRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDL 159 (315)
T ss_dssp ---------CTTHHHHHHHHHHHHHTTHHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTT
T ss_pred -cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcc
Confidence 2445789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccccc
Q 016064 254 SGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLY 333 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~ 333 (396)
||.+||++|.+.||||++|+|++++++|++||+||+|||+|++||+++||+|||++|++||+++|||||+||+|||++.+
T Consensus 160 qG~~la~~L~~~gI~vtli~Dsa~~~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~~K~~~~~ 239 (315)
T 3ecs_A 160 SGKKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLF 239 (315)
T ss_dssp HHHHHHHHHHTTTCCEEEECGGGHHHHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSCC
T ss_pred hHHHHHHHHHHcCCCEEEEehhHHHHHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEeccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccCCC---CCcCCCCccccccceeccCCCCccEEEeCCCCCCCchHHHHHHhhhC
Q 016064 334 PLDQKDMGPALRPIDF---GVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 396 (396)
Q Consensus 334 p~~~~d~~~~~~~~~~---~~~~~~~~~v~np~fD~tPpelIt~iITE~Gv~~Ps~v~~~L~~~Y~ 396 (396)
|+++++++.+.+.... ....++++.++||.||+|||+|||+||||.|+++|++|+++|+++|+
T Consensus 240 ~~~~~~i~~e~~~~~ev~~~~~~~~~v~v~NP~fDvTP~~lIt~iITe~Gv~~p~~vs~eLik~~~ 305 (315)
T 3ecs_A 240 PLNQQDVPDKFKYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305 (315)
T ss_dssp CSSGGGSCGGGTC-------------CCBCCCSEEEECGGGCSEEEETTEEECGGGHHHHHHHHHT
T ss_pred CCCcccCCccccChhhccccccCCCcCcCCCCCccCCCHHHcCEEEcCCCCCCcchhhHHHHHHHH
Confidence 9888776533221110 01245689999999999999999999999999999999999999996
No 2
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=100.00 E-value=1.3e-71 Score=554.28 Aligned_cols=309 Identities=29% Similarity=0.329 Sum_probs=275.6
Q ss_pred CCCCccccCCCCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q 016064 82 TGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWDTTSISLTAG 161 (396)
Q Consensus 82 ~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aRPt~v~L~na 161 (396)
-...++....+.++.|+.|+.|+ ++|+|.+ +++|+.+|..+++.+++++..+|.+.|+.++++|.++|||+++|+|+
T Consensus 12 ~~~~~~~~~~~~~~~~~aI~~m~-VrGApai--~iaaa~~l~~~~~~~~~~~~~~l~~~l~~~~~~L~~aRPtav~L~~a 88 (338)
T 3a11_A 12 IEGRHMAVVKEVLEIAEKIKNME-IRGAGKI--ARSAAYALQLQAEKSKATNVDEFWKEMKQAAKILFETRPTAVSLPNA 88 (338)
T ss_dssp -------CCSHHHHHHHHHHTCS-SCSHHHH--HHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHTTCTTCSHHHHH
T ss_pred cceEEEEEeCCHHHHHHHHHhCc-EeCcHHH--HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCCChHHHHHH
Confidence 34567777888899999999998 9999987 59999999999998888899999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCe
Q 016064 162 CDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKL 241 (396)
Q Consensus 162 ~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~ 241 (396)
+++|++.+.+... ...+++++|+.+++.++.|.+++..++++|+++|+++|++|++|||||||++|+++|+.|+++||+
T Consensus 89 ~~~~~~~i~~~~~-~~~~~~~~k~~l~~~a~~~~~e~~~~~~~I~~~g~~~I~~g~~ILTh~~S~tvl~~l~~A~~~gk~ 167 (338)
T 3a11_A 89 LRYVMHRGKIAYS-SGADLEQLRFVIINAAKEFIHNSEKALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKD 167 (338)
T ss_dssp HHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHHHCCCe
Confidence 9999998875332 235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEE
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVY 321 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvy 321 (396)
|+|||+||||++||+.+|++|.+.|||||+|+|++++++|++||+||+|||+|++||+++||+|||++|++||+|+||||
T Consensus 168 ~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfy 247 (338)
T 3a11_A 168 IKVIVTETRPKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTM 247 (338)
T ss_dssp CEEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGGTTTTGGGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEE
T ss_pred EEEEEeCCCCchhhHHHHHHHHhCCCCEEEEehHHHHHHHHhCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEE
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccccccCCCCCCCC----CcccCCCCC-cC-CCCccccccceeccCCCCccEEEeCCCCCCCchHHHHHHhhh
Q 016064 322 VAAESYKFARLYPLDQKDMGP----ALRPIDFGV-PI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLY 395 (396)
Q Consensus 322 V~aes~Kf~~~~p~~~~d~~~----~~~~~~~~~-~~-~~~~~v~np~fD~tPpelIt~iITE~Gv~~Ps~v~~~L~~~Y 395 (396)
|+||+|||++.++.+. ++.. +.+...++. .. +++++++||.||+|||+|||+||||.|+++|++|+++|+++|
T Consensus 248 V~a~~~k~d~~~~~g~-~i~iE~r~~~ev~~~g~~~~w~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~v~~~L~e~y 326 (338)
T 3a11_A 248 IAAETYKFHPETMLGQ-LVEIEMRDPTEVIPEDELKTWPKNIEVWNPAFDVTPPEYVDVIITERGIIPPYAAIDILREEF 326 (338)
T ss_dssp EECCGGGBCSCCSSSS-CCCCCBCCGGGTSCHHHHTTSCTTEEECCBSEEEECGGGCSEEEETTEEECGGGHHHHHHHHH
T ss_pred EecccceecccCCCCc-ccccccCCHHHcccccccccCCCCceecCcceeccCHHHcCEEecCCCccCchhHHHHHHHHh
Confidence 9999999999877642 2222 222221111 12 578999999999999999999999999999999999999998
No 3
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=100.00 E-value=1.8e-68 Score=536.87 Aligned_cols=313 Identities=24% Similarity=0.308 Sum_probs=280.0
Q ss_pred HHHhccccCCCCCccccCCCCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcC
Q 016064 73 QEAATRAVATGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWD 152 (396)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aR 152 (396)
-..+.|..+|+..++.+..+.++.|+.|+.|+ ++|+|.++ ++|...|...++...+.+..+|.+.|+.++++|.++|
T Consensus 39 l~ilDq~~lP~~~~~~~~~~~~~~~~aIk~m~-VrGApaIg--iaaa~~l~l~~~~~~~~~~~~l~~~l~~~~~~L~~aR 115 (374)
T 2yvk_A 39 ITILNQQKLPDETEYLELTTKEDVFDAIVTLK-VRGAPAIG--ITAAFGLALAAKDIETDNVTEFRRRLEDIKQYLNSSR 115 (374)
T ss_dssp EEEECGGGTTTCCCEEEECSHHHHHHHHHTTS-SCSHHHHH--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEecCCCCCeEEEEEeCCHHHHHHHHHhCc-cCCcHHHH--HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhC
Confidence 34678899999999999999999999999999 99999875 8888888888887777889999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecCh-------
Q 016064 153 TTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFS------- 225 (396)
Q Consensus 153 Pt~v~L~na~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S------- 225 (396)
||+++|+|++++|++.+.+ ..+++++|+.+++.++.|.+++..++++|+++|+++|++|++|||||||
T Consensus 116 PtavnL~~ai~r~~~~i~~-----~~~~~~~k~~l~~~a~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcnsg~Lat~g 190 (374)
T 2yvk_A 116 PTAINLSWALERLSHSVEN-----AISVNEAKTNLVHEAIQIQVEDEETCRLIGQNALQLFKKGDRIMTICNAGSIATSR 190 (374)
T ss_dssp SSCHHHHHHHHHHHHHTTT-----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSS
T ss_pred CcHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCC
Confidence 9999999999999887753 2468899999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHHHhccc--CCEEEEcceeEeecCCee
Q 016064 226 -RVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGII 301 (396)
Q Consensus 226 -~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~~~m~~--vd~VlvGAd~V~~NG~v~ 301 (396)
++|+++|+.|+++||+|+|||+||||++||.+ +|++|.+.|||||+|+|++++++|++ ||+||+|||+|++||+++
T Consensus 191 ~gTal~~l~~A~~~gk~~~V~v~EtRP~~qG~rltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~ 270 (374)
T 2yvk_A 191 YGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTA 270 (374)
T ss_dssp SCSTTHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHHHTTCCEEEECCSEEETTCCEE
T ss_pred CcHHHHHHHHHHHcCCEEEEEEeCCCCccccHHHHHHHHHHcCCCEEEEehhHHHHHhhhcCCCEEEECccEEecCCCEE
Confidence 58999999999999999999999999999976 59999999999999999999999977 999999999999999999
Q ss_pred ccccHHHHHHHhhhCCCcEEEecccccccccccCCCCCCCC----CcccCCC-C-CcCCCCccccccceeccCCCCccEE
Q 016064 302 NMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGP----ALRPIDF-G-VPIPSKVEVETSARDYTPPQYLTLL 375 (396)
Q Consensus 302 nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~p~~~~d~~~----~~~~~~~-~-~~~~~~~~v~np~fD~tPpelIt~i 375 (396)
||+|||++|++||+|+|||||+||+|||++.++.+ .++.. +.+...+ + ...+++++++||.||+|||+|||+|
T Consensus 271 NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g-~~i~iEer~~~Ev~~~~g~~~~~~~v~v~NPaFDvTP~~lIt~i 349 (374)
T 2yvk_A 271 NKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCG-ADIPIEERDPEEVRQISGVRTAPSNVPVFNPAFDITPHDLISGI 349 (374)
T ss_dssp EETTHHHHHHHHHHTTCCEEEECCGGGEETTCSSG-GGSCCCBCCTHHHHEETTEECSCTTCCBCCBSEEEECGGGCSEE
T ss_pred ecccHHHHHHHHHHcCCCEEEecccceeCccCCCc-cccccccCCHHHhcccCCceecCCCcceeCcceeccCHHHCCEE
Confidence 99999999999999999999999999999887664 22221 1111111 1 1246789999999999999999999
Q ss_pred EeCCCCCCCchHHHHHHhhh
Q 016064 376 FTDLGVLTPSVVSDELIQLY 395 (396)
Q Consensus 376 ITE~Gv~~Ps~v~~~L~~~Y 395 (396)
|||.|+++|++.. .|.++|
T Consensus 350 ITE~Gv~~P~~~~-~l~~~~ 368 (374)
T 2yvk_A 350 ITEKGIMTGNYEE-EIEQLF 368 (374)
T ss_dssp EETTEEECSCHHH-HHHHHT
T ss_pred eccCCccCcchHH-HHHHHh
Confidence 9999999999855 576776
No 4
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=100.00 E-value=6.7e-68 Score=529.31 Aligned_cols=309 Identities=27% Similarity=0.337 Sum_probs=276.6
Q ss_pred HhccccCCCCCccccCCCCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcCCC
Q 016064 75 AATRAVATGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWDTT 154 (396)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aRPt 154 (396)
.+.|..+|+..++.+..+.++.|+.|+.|+ ++|+|.++ ++|...|...++...+.+..+|.+.|+.++++|.++|||
T Consensus 14 ~ldq~~lP~~~~~~~~~~~~~~~~aIk~m~-VrGApai~--iaaa~~l~l~~~~~~~~~~~~l~~~l~~~~~~L~~aRPt 90 (351)
T 1t5o_A 14 LIDQTKLPEKLEVIECRNVEELADAIKKLA-VRGAPALE--AAGAYGIALAAREREFADVDELKEHLKKAADFLASTRPT 90 (351)
T ss_dssp EECGGGTTTCCCEEEECSHHHHHHHHHTTS-SCSHHHHH--HHHHHHHHHHTTSSCCSCHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEecCCCCCeEEEEEeCCHHHHHHHHHhCC-cCCcHHHH--HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhCCc
Confidence 567889999999999999999999999999 99999775 888999988888777788999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecCh--------H
Q 016064 155 SISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFS--------R 226 (396)
Q Consensus 155 ~v~L~na~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S--------~ 226 (396)
+++|+|++++|++.+.+ ..+++++|+.+++.++.|.+++..++++|+++|+++|++|++||||||| +
T Consensus 91 av~l~~a~~~~~~~i~~-----~~~~~~~k~~l~~~~~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcnsg~lat~g~g 165 (351)
T 1t5o_A 91 AVNLFVGIERALNAALK-----GESVEEVKELALREAEKLAEEDVERNRKMGEYGAELLEDGDVVLTYCNAGRLATVDWG 165 (351)
T ss_dssp CHHHHHHHHHHHHHHTT-----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSSSSSSC
T ss_pred hHHHHHHHHHHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccccccCCC
Confidence 99999999999988754 2568899999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHHHhccc--CCEEEEcceeEeecCCeecc
Q 016064 227 VVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINM 303 (396)
Q Consensus 227 ~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~~~m~~--vd~VlvGAd~V~~NG~v~nk 303 (396)
+|+++|+.|+++||+|+|||+||||++||.+ +|++|.+.|||||+|+|++++++|++ ||+||+|||+|++|| ++||
T Consensus 166 tal~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG-v~NK 244 (351)
T 1t5o_A 166 TALGVVRSAVEQGKEIRVIACETRPLNQGSRLTCWELMEDGIDVTLITDSMVGIVMQKGMVDKVIVGADRIVRDA-VFNK 244 (351)
T ss_dssp SHHHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHTTCCSEEEECCSEEETTE-EEEE
T ss_pred hHHHHHHHHHHCCCEEEEEEeCCCcccccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccchhhcC-cccc
Confidence 8999999999999999999999999999976 59999999999999999999999977 999999999999999 9999
Q ss_pred ccHHHHHHHhhhCCCcEEEecccccccccccCCCCCCCCCc----ccCCC-C-CcCCCCccccccceeccCCCCccEEEe
Q 016064 304 MGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPAL----RPIDF-G-VPIPSKVEVETSARDYTPPQYLTLLFT 377 (396)
Q Consensus 304 iGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~p~~~~d~~~~~----~~~~~-~-~~~~~~~~v~np~fD~tPpelIt~iIT 377 (396)
+|||++|++||+|+|||||+||+|||++. +.+ .++..+. +...+ + ...+++++++||.||+|||+|||+|||
T Consensus 245 iGT~~lAl~Ak~~~vPfyV~a~~~k~d~~-~~g-~~i~iEer~~~ev~~~~g~~~~~~~v~v~NPaFDvTP~~lIt~iIT 322 (351)
T 1t5o_A 245 IGTYTVSVVAKHHNIPFYVAAPKATFDWE-RTA-KDVVIEERPREELIFCGKRQIAPLNVKVYNPAFDPTPLENVTALIT 322 (351)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCGGGBCTT-CCG-GGCCCCBCCTHHHHEETTEECSCTTCEECCBSEEEEEGGGCSEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEeCccceeccc-cCC-CccccccCCHHHhcccCCeeecCCCcceeCccccCCCHHHCCEEEe
Confidence 99999999999999999999999999987 532 2222211 11111 1 124678999999999999999999999
Q ss_pred CCCCCCCchHHHHHHhhh
Q 016064 378 DLGVLTPSVVSDELIQLY 395 (396)
Q Consensus 378 E~Gv~~Ps~v~~~L~~~Y 395 (396)
|.|+++|++.. .|.++|
T Consensus 323 E~Gv~~p~~~~-~l~~~~ 339 (351)
T 1t5o_A 323 EYGVIYPPYEV-NVPKVL 339 (351)
T ss_dssp TTEEECSCHHH-HHHHHT
T ss_pred CCCccCcchHH-HHHHHH
Confidence 99999999866 466664
No 5
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=100.00 E-value=1.9e-67 Score=525.30 Aligned_cols=309 Identities=24% Similarity=0.290 Sum_probs=272.4
Q ss_pred HHhccccCCCCCccccCCCCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcCC
Q 016064 74 EAATRAVATGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWDT 153 (396)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aRP 153 (396)
..+.|..+|+..++....+.++.|+.|+.|+ ++|+|.++ ++|...|...++.....+.. +.|+.++++|.++||
T Consensus 18 ~~ldq~~lP~~~~~~~~~~~~~~~~aIk~m~-VrGAp~ig--~aaa~~l~l~~~~~~~~~~~---~~l~~~~~~L~~aRP 91 (347)
T 1t9k_A 18 KLLDQRKLPFIEEYVECKTHEEVAHAIKEMI-VRGAPAIG--VAAAFGYVLGLRDYKTGSLT---DWMKQVKETLARTRP 91 (347)
T ss_dssp EEECTTTTTTCCCEEEECSHHHHHHHHHHTS-SCSHHHHH--HHHHHHHHHHHHTCCSSCHH---HHHHHHHHHHHTSCS
T ss_pred EEEeCCCCCCceEEEEeCCHHHHHHHHHhCC-cCCcHHHH--HHHHHHHHHHHHhcccCCHH---HHHHHHHHHHHHhCC
Confidence 3577889999999999999999999999999 99999875 77888888777765554555 449999999999999
Q ss_pred CchhHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecChH-------
Q 016064 154 TSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSR------- 226 (396)
Q Consensus 154 t~v~L~na~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S~------- 226 (396)
|+++|+|++++|++.+.+.. +++++|+.+++.++.|.+++..++++|+++|+++|++|++|||||||+
T Consensus 92 tav~l~~a~~~~~~~i~~~~-----~~~~~k~~l~~~~~~~~~e~~~~~~~I~~~g~~~I~~g~~ILThcns~~lat~~~ 166 (347)
T 1t9k_A 92 TAVNLFWALNRMEKVFFENA-----DRENLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDY 166 (347)
T ss_dssp SCTHHHHHHHHHHHHHHTTT-----TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSS
T ss_pred chHHHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCc
Confidence 99999999999999886432 456799999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHHHhccc--CCEEEEcceeEeecCCeec
Q 016064 227 -VVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 227 -~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~~~m~~--vd~VlvGAd~V~~NG~v~n 302 (396)
+|+++|+.|+++||+|+|||+||||++||.+ +|++|.+.|||||+|+|++++++|++ ||+||+|||+|++||+++|
T Consensus 167 gtvl~~l~~A~~~gk~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG~v~N 246 (347)
T 1t9k_A 167 GTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLMKRGLIDAVVVGADRIALNGDTAN 246 (347)
T ss_dssp CSHHHHHHHHHHTTCCEEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEE
T ss_pred cHHHHHHHHHHHCCCeEEEEEeCCCCccccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEEe
Confidence 9999999999999999999999999999986 59999999999999999999999977 9999999999999999999
Q ss_pred cccHHHHHHHhhhCCCcEEEecccccccccccCCCCCCCC----CcccCCC-C-CcCCCCccccccceeccCCCCccEEE
Q 016064 303 MMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGP----ALRPIDF-G-VPIPSKVEVETSARDYTPPQYLTLLF 376 (396)
Q Consensus 303 kiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~p~~~~d~~~----~~~~~~~-~-~~~~~~~~v~np~fD~tPpelIt~iI 376 (396)
|+|||++|++||+|+|||||+||+|||++.++.+ .++.. +.+...+ + ...+++++++||.||+|||+|||+||
T Consensus 247 KiGT~~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g-~~i~iE~r~~~ev~~~~g~~~~~~~v~v~NPaFDvTP~~lIt~iI 325 (347)
T 1t9k_A 247 KIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSG-EEIPIEERRPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAII 325 (347)
T ss_dssp ETTHHHHHHHHHHTTCCEEEECCGGGEETTCSSG-GGSCCCBCCTHHHHEETTEECSCTTCEECCBSEEEECGGGCSEEE
T ss_pred cccHHHHHHHHHHcCCCEEEecccceeccccCCc-cccccccCChHhccccCCeeccCCCccccCcccccCCHHHCCEEe
Confidence 9999999999999999999999999999887653 22221 1111111 1 12467899999999999999999999
Q ss_pred eCCCCCCCchHHHHHHhhh
Q 016064 377 TDLGVLTPSVVSDELIQLY 395 (396)
Q Consensus 377 TE~Gv~~Ps~v~~~L~~~Y 395 (396)
||.|+++|++.++ |.++|
T Consensus 326 TE~Gv~~p~~~~~-l~~~~ 343 (347)
T 1t9k_A 326 TEKGVIRPPFEEN-IKKIL 343 (347)
T ss_dssp ETTEEECSSHHHH-HHHHH
T ss_pred ccCCccCcchHHH-HHHHh
Confidence 9999999999764 66766
No 6
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=100.00 E-value=2.8e-66 Score=522.31 Aligned_cols=316 Identities=22% Similarity=0.216 Sum_probs=271.9
Q ss_pred hHHHHHHHHhccccCCCCCccccCCCCcchhhHHHHHHHHhcCCChHH--HHHHHHHHHHHHHccCCCCHHHHHHHHHHH
Q 016064 67 DWLAQSQEAATRAVATGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAE--AVAAIRALAAVIRNSEAKTMMELEIELKKA 144 (396)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~--~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~ 144 (396)
.|-..+-..+.|..+|+...+....+.++.|+.|+.|+ ++|+|.++. +.++..+++++....+|++..+|.+.|+.+
T Consensus 22 ~~~~~~l~ildq~~lP~~~~~~~~~~~~~~~~aIk~m~-VrGApaIgiaaa~~l~l~~~~~~~~~~~~~~~~l~~~l~~~ 100 (383)
T 2a0u_A 22 KYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMR-VRGAPAIAVSAALGIAVATQRKAANGELKSGREVQTFLLTS 100 (383)
T ss_dssp EEETTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTS-SCSHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCCceEEEEcCCHHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHH
Confidence 34333344678899999999999999999999999999 999998752 233333444444455677999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--------cC
Q 016064 145 SDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIF--------DG 216 (396)
Q Consensus 145 ~~~L~~aRPt~v~L~na~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~--------dg 216 (396)
+++|.++|||+++|+|++++|++.+.+.. +..+++++|+.+++.++.|.+++..++++|+++|+++|. +|
T Consensus 101 ~~~L~~aRPtavnL~na~~r~~~~i~~~~--~~~~~~~~k~~l~~~a~~i~~e~~~~~~~I~~~g~~~I~~~~~~~~~~g 178 (383)
T 2a0u_A 101 CDFVMTSRPTAVNLFNCLRDLKAQVDKLD--PTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILAAAKAEGRDK 178 (383)
T ss_dssp HHHHTTSCCSCSHHHHHHHHHHHHHHHSC--TTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCC
Confidence 99999999999999999999999886532 224678999999999999999999999999999999999 99
Q ss_pred ceEEeecCh--------HHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHHHhccc--CC
Q 016064 217 CTILVHGFS--------RVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVAYTMDE--VD 285 (396)
Q Consensus 217 ~~ILT~~~S--------~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~~~m~~--vd 285 (396)
++||||||| ++|+++|+.|+++||+|+|||+||||++||.+ +|++|.+.|||||+|+|++++++|++ ||
T Consensus 179 ~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd 258 (383)
T 2a0u_A 179 VSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAASSLMLNRKID 258 (383)
T ss_dssp EEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHHSCCC
T ss_pred CEEEEecCCcchhcCCCchHHHHHHHHHHcCCeEEEEEeCCCCccchHHHHHHHHHHcCCCEEEEehhHHHHHhhcCCCC
Confidence 999999998 68999999999999999999999999999975 69999999999999999999999977 99
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccccccCCCCCCC----CCcccCCC---CC-cCCCC-
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMG----PALRPIDF---GV-PIPSK- 356 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~p~~~~d~~----~~~~~~~~---~~-~~~~~- 356 (396)
+||+|||+|++||+++||+|||++|++||+|+|||||+||+|||++.++.+ .++. ++.+...+ +. ..+++
T Consensus 259 ~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g-~~i~iEer~~~Ev~~~~~~g~~~a~~~~ 337 (383)
T 2a0u_A 259 AVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASG-NHVEIEEREPTEITTNLVTKQRVVADGP 337 (383)
T ss_dssp EEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSG-GGSCCCBCCTHHHHBCTTTCCBCSCCCT
T ss_pred EEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEeCCcceecCcCCCc-cccccccCCHHHhcccccCCceecCCCC
Confidence 999999999999999999999999999999999999999999999887653 1221 12122221 21 13566
Q ss_pred -ccccccceeccCCCCcc-EEEeCCCCCCCch
Q 016064 357 -VEVETSARDYTPPQYLT-LLFTDLGVLTPSV 386 (396)
Q Consensus 357 -~~v~np~fD~tPpelIt-~iITE~Gv~~Ps~ 386 (396)
++++||.||+|||+||| +||||.|+++|+.
T Consensus 338 ~v~v~NPaFDvTP~~lIt~~iITE~Gv~~p~~ 369 (383)
T 2a0u_A 338 HLSIWNPVFDITPSELITGGIITEKGVQAPAA 369 (383)
T ss_dssp TEEECCBSEEEECGGGCCSEEECSSCEECCCS
T ss_pred ceeeecccccccChHHCCcEEEccCCccCCcc
Confidence 99999999999999999 9999999998865
No 7
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=100.00 E-value=2.9e-62 Score=475.09 Aligned_cols=271 Identities=27% Similarity=0.369 Sum_probs=243.5
Q ss_pred CCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHh
Q 016064 92 KSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSEAKTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTR 171 (396)
Q Consensus 92 ~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~~~t~~eL~~~L~~~~~~L~~aRPt~v~L~na~~~f~r~i~r 171 (396)
+.++.|+.|+.|+ ++|+|.+ +++|+.+|..+++.+ +..+|.+.|+.++++|.++||++++|+|+++++
T Consensus 5 ~~~~~~~~i~~~~-vrGa~~i--~~aa~~~l~~~~~~~---~~~~~~~~l~~~~~~L~~~RPtav~l~~a~~~~------ 72 (276)
T 1vb5_A 5 RVLEILREMKRER-IKGASWL--AKKGAEAFLTLAEEL---DESLLEDAIMELREEVVKVNPSMASLYNLARFI------ 72 (276)
T ss_dssp HHHHHHHHHHHCS-SSCHHHH--HHHHHHHHHHHHHHS---CTTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHS------
T ss_pred cHHHHHHHHHhCc-EeCcHHH--HHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHc------
Confidence 3456788888887 7787766 599999999999876 667899999999999999999999999998654
Q ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCC
Q 016064 172 TSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRP 251 (396)
Q Consensus 172 ~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP 251 (396)
+++++|+.+++.++.|.+++..++++|+++|+++|++|++|||||+|++++++|+.|+++|++|+|||+||||
T Consensus 73 -------~~~~~k~~l~~~~~~~~~~~~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP 145 (276)
T 1vb5_A 73 -------PVTNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSP 145 (276)
T ss_dssp -------CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCc
Confidence 1345689999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred CchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccc
Q 016064 252 DRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR 331 (396)
Q Consensus 252 ~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~ 331 (396)
++||+.+|++|.+.||+|++|+|++++++|++||+||+|||+|.+||+++||+|||++|++||+|++||||+||++||++
T Consensus 146 ~~qG~~~a~~L~~~gI~vtli~dsa~~~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K~~~ 225 (276)
T 1vb5_A 146 DYEGLHLARELEFSGIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFHP 225 (276)
T ss_dssp TTHHHHHHHHHHHTTCCEEEECGGGHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCS
T ss_pred chhhHHHHHHHHHCCCCEEEEcHHHHHHHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcccCCCCCcCCCCccccccceeccCCCCccEEEeCCCCCCCchHH
Q 016064 332 LYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVS 388 (396)
Q Consensus 332 ~~p~~~~d~~~~~~~~~~~~~~~~~~~v~np~fD~tPpelIt~iITE~Gv~~Ps~v~ 388 (396)
. +. +.++..+.+.. ..++++++||.||+|||+|||+||||.|+++|++|+
T Consensus 226 ~-~~-~~~i~iE~r~~-----~e~~v~v~np~fD~tP~~lI~~iITe~Gv~~p~~v~ 275 (276)
T 1vb5_A 226 T-LK-SGDVMLMERDL-----IRGNVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI 275 (276)
T ss_dssp S-CC-GGGCCCCBCCC-----EETTEECCCBCEEEECGGGCSEEEETTEEECTTTTC
T ss_pred c-cC-ccccccccCCc-----cccCccccCCCeEecCHHHCCEEEeCCCccCccccC
Confidence 7 32 23333222211 116789999999999999999999999999999886
No 8
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=100.00 E-value=2.7e-46 Score=344.94 Aligned_cols=157 Identities=27% Similarity=0.400 Sum_probs=135.6
Q ss_pred CCeeEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHHHhccc----CCEEEEcceeEeecCCeeccccHHHHHHHh
Q 016064 239 KKLFRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVAYTMDE----VDMVFVGADGVVESGGIINMMGTYQIALVA 313 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~~~m~~----vd~VlvGAd~V~~NG~v~nkiGT~~lAl~A 313 (396)
||+|+|||+||||++||.+ +|++|.+.||+||+|+|++++++|++ ||+||+|||+|++||+++||+|||++|++|
T Consensus 2 ~k~~~V~v~EsRP~~qG~rlta~eL~~~gI~vtlI~Dsa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~A 81 (191)
T 1w2w_B 2 PRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVIC 81 (191)
T ss_dssp CEEEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHH
T ss_pred CcEEEEEEcCCCCccccHHHHHHHHHHcCCCEEEEechHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHH
Confidence 7899999999999999986 59999999999999999999999977 999999999999999999999999999999
Q ss_pred hhCCCcEEEecccccccccccCC------CCCCCCCcccCCC------C---------------CcCCCCccccccceec
Q 016064 314 HSMNKPVYVAAESYKFARLYPLD------QKDMGPALRPIDF------G---------------VPIPSKVEVETSARDY 366 (396)
Q Consensus 314 k~~~vPvyV~aes~Kf~~~~p~~------~~d~~~~~~~~~~------~---------------~~~~~~~~v~np~fD~ 366 (396)
|+|+||||||||+|||++.++.+ +++..+....... + ...+++++++||+||+
T Consensus 82 k~~~vPf~V~a~~~k~~~~~~~g~~i~iE~r~~~ev~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~v~Np~fDv 161 (191)
T 1w2w_B 82 KQFGIKFFVVAPKTTIDNVTETGDDIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEINVWNPAFDI 161 (191)
T ss_dssp HHHTCEEEEECCGGGBCSSCCSGGGCCCCBCCTHHHHEEEEEEBCTTTCCBCBCTTSCBCEEEEECSCTTCEECCBSEEE
T ss_pred HHcCCCEEEecccceeeeccCCcceeecccCCHHHhccccCccccccccccccccccccccccccccCCCcccccccccc
Confidence 99999999999999999887663 2221110000000 0 1235788999999999
Q ss_pred cCCCCccEEEeCCCCCCCchHHH-HHHhhh
Q 016064 367 TPPQYLTLLFTDLGVLTPSVVSD-ELIQLY 395 (396)
Q Consensus 367 tPpelIt~iITE~Gv~~Ps~v~~-~L~~~Y 395 (396)
|||+|||+||||.|+++|+.+.+ .|+++|
T Consensus 162 TP~~lIt~iITE~Gv~~ps~~~~~~l~~~~ 191 (191)
T 1w2w_B 162 TPHELIDGIITEEGVFTKNSSGEFQLESLF 191 (191)
T ss_dssp ECGGGCSEEEETTEEECCCTTSCCCCGGGC
T ss_pred CCHHHcCEEEecCcccCCCCcchhhHHhhC
Confidence 99999999999999999999888 888876
No 9
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=99.86 E-value=2.3e-22 Score=187.39 Aligned_cols=160 Identities=13% Similarity=0.090 Sum_probs=139.9
Q ss_pred HhccccCCCCCccccCCCCcchhhHHHHHHHHhcCCChHHHHHHHHHHHHHHHccC-CCCHH-----------HHHHHHH
Q 016064 75 AATRAVATGGQEIVDGGKSGRAFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRNSE-AKTMM-----------ELEIELK 142 (396)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~vI~~~~~~l~~~~ia~~IAAi~aL~~vI~~~~-~~t~~-----------eL~~~L~ 142 (396)
.+.|..+|+..++.+..+.++.|++|++|+ ++|+|.|+ ++|...|.-.++..+ ..+.. ++...|+
T Consensus 20 iLDQ~~LP~e~~~~~~~~~~~v~~AIk~M~-VRGAPaIg--iaAA~glal~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (211)
T 1w2w_A 20 VLDQLLLPYTTKYVPIHTIDDGYSVIKSMQ-VRGAPAIA--IVGSLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLN 96 (211)
T ss_dssp EECTTTTTTCCCEEECCSHHHHHHHHHTTS-SCSHHHHH--HHHHHHHHHHHHHHHHCTTSTGGGGSCTTCHHHHHHHHH
T ss_pred EEecCCCCCcEEEEEeCCHHHHHHHHHCCc-ccCchHHH--HHHHHHHHHHHHhccccCChhhcccccccchHHHHHHHH
Confidence 577889999999999999999999999999 99999986 666666665555322 23334 8999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------c--
Q 016064 143 KASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFI------F-- 214 (396)
Q Consensus 143 ~~~~~L~~aRPt~v~L~na~~~f~r~i~r~~~~~~~~~~~~k~~Lie~i~~f~e~~~~a~~~Ia~~a~~~I------~-- 214 (396)
..+++|.++|||++||.|++++|++.+... .+.+++++.+++.++.|.+++..++++|+++|+++| .
T Consensus 97 ~~~~~L~~sRPTAVNL~~Al~r~~~~~~~~-----~~~~~~~~~l~~~a~~i~~ed~~~n~~IG~~Ga~lI~~~~~~~~~ 171 (211)
T 1w2w_A 97 KRLDFLLSSRPTAVNLSNSLVEIKNILKSS-----SDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGF 171 (211)
T ss_dssp HHHHHHHTSCCSCSHHHHHHHHHHHHHHTC-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 999999999999999999999998877532 467889999999999999999999999999999999 7
Q ss_pred -cCceEEeecCh--------HHHHHHHHHHHHCCCee
Q 016064 215 -DGCTILVHGFS--------RVVMEVLKMAAQNKKLF 242 (396)
Q Consensus 215 -dg~~ILT~~~S--------~~V~~~L~~A~~~gk~f 242 (396)
+|++||||||| +|++++|+.|+++||.|
T Consensus 172 ~dg~~ILTHCNtG~LAT~g~GTALgvIr~a~~~Gk~~ 208 (211)
T 1w2w_A 172 KDEFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAK 208 (211)
T ss_dssp CSEEEEEECSCCSGGGSSSSCSHHHHHHHHHHHHHHH
T ss_pred CCCCeEEeECCCchHhhcCcchHHHHHHHHHHcCCcc
Confidence 89999999999 69999999999988765
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=98.31 E-value=1.6e-06 Score=81.44 Aligned_cols=117 Identities=17% Similarity=0.149 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHC----CCe-eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN----KKL-FRVLCTEGRPDRSGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~----gk~-f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D 274 (396)
...+.|++.|+++|++|++|..-+ ++|+..+++...+. +.+ ++| |+-| ...+..|.+.||++..+.+
T Consensus 7 ~~K~~IA~~Aa~~I~dg~~I~Lgs-GST~~~~~~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~v~~l~~ 78 (227)
T 1uj6_A 7 SYKKEAAHAAIAYVQDGMVVGLGT-GSTARYAVLELARRLREGELKGVVG-VPTS------RATEELAKREGIPLVDLPP 78 (227)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECC-SHHHHHHHHHHHHHHHTTSSCSCEE-EESS------HHHHHHHHHTTCCBCCCCT
T ss_pred HHHHHHHHHHHHHCCCCCEEEEcC-CHHHHHHHHHHhhhhhhcCCCCEEE-ECCc------HHHHHHHHhCCCeEEEcCC
Confidence 467889999999999999998644 56666666655432 224 776 4543 5678888889999887732
Q ss_pred hHHHHhcccCCEEEEcceeEeecCCeeccccHHHH--HHHhhhCCCcEEEeccccccccc
Q 016064 275 SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQI--ALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 275 sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~l--Al~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
.++|+.|+|||.|-.++......|...+ +++++. ...+|+++++.||.+.
T Consensus 79 -------~~~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~-a~~~ivlaD~sK~~~~ 130 (227)
T 1uj6_A 79 -------EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERV-AKEFIVIADHTKKVPV 130 (227)
T ss_dssp -------TCEEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHT-EEEEEEEEEGGGBCSS
T ss_pred -------CcCCEEEECCCccCccccEECCHHHHHHHHHHHHhc-cCCEEEEEEcchhccc
Confidence 4899999999999999855555565555 344442 4599999999999875
No 11
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=98.09 E-value=7.2e-06 Score=77.87 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhh-ccccCceEEeecChHHHHHHHHHHHHC---C-C-eeEEEEeCCCCCchhHHHHHHHHhCCCCEEE
Q 016064 198 SYKARKIIAMLSQD-FIFDGCTILVHGFSRVVMEVLKMAAQN---K-K-LFRVLCTEGRPDRSGLRLANELAKLDVPVKL 271 (396)
Q Consensus 198 ~~~a~~~Ia~~a~~-~I~dg~~ILT~~~S~~V~~~L~~A~~~---g-k-~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl 271 (396)
.....+.|++.|++ +|++|++|. .|.++|+..+++...+. + . .++| |+- +...+..|.+.||++..
T Consensus 9 ~~~~K~~iA~~Aa~~~I~dg~~Ig-LgsGST~~~~~~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~v~~ 80 (244)
T 2f8m_A 9 MDSLKKIVAYKAVDEYVQSNMTIG-LGTGSTVFYVLERIDNLLKSGKLKDVVC-IPT------SIDTELKARKLGIPLTT 80 (244)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEE-ECCSTTTHHHHHHHHHHHHHTSSCSCEE-EES------SHHHHHHHHHHTCCBCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhccCCCCEEE-ECC------cHHHHHHHHHCCCeEEE
Confidence 45678899999999 999999988 67777777777665432 2 1 5665 443 34667888888999887
Q ss_pred EcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHH-HhhhCCCcEEEeccccccc-cc
Q 016064 272 LIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAL-VAHSMNKPVYVAAESYKFA-RL 332 (396)
Q Consensus 272 I~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl-~Ak~~~vPvyV~aes~Kf~-~~ 332 (396)
+- .++++|+.|.|||.|-.+++++.--|-..+-- +.-....-+||++++.||. +.
T Consensus 81 l~------~~~~iD~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~SK~~~~~ 137 (244)
T 2f8m_A 81 LE------KHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNG 137 (244)
T ss_dssp CC------SSCCBSEEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSC
T ss_pred ec------ccCcCCEEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEECCcccccc
Confidence 62 35689999999999999987776666655554 2446778899999999999 54
No 12
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=98.06 E-value=1.6e-05 Score=74.83 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHC---CC--eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN---KK--LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~---gk--~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D 274 (396)
...+.|++.|+++|++|++|. .+.++|+..+++...+. +. +++| |+- +...+..|.+.||++..+-
T Consensus 5 ~~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~~a~~L~~~~~~~~l~~itv-VTn------S~~~a~~l~~~gi~vi~l~- 75 (229)
T 1lk5_A 5 EMKKIAAKEALKFIEDDMVIG-LGTGSTTAYFIKLLGEKLKRGEISDIVG-VPT------SYQAKLLAIEHDIPIASLD- 75 (229)
T ss_dssp HHHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHTTSSCSCEE-EES------SHHHHHHHHHTTCCBCCGG-
T ss_pred HHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhhccCCCEEE-ECC------cHHHHHHHHhCCCeEEEeC-
Confidence 467889999999999999988 57778877777766432 21 5666 443 3467788888899887642
Q ss_pred hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHH-HHhhhCCCcEEEeccccccccc
Q 016064 275 SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIA-LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 275 sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA-l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
.+.++|+.|+|||.|-.++++..-.|-..+- -+......-+|+++++.||...
T Consensus 76 -----~~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~A~~~ivlaD~SK~~~~ 129 (229)
T 1lk5_A 76 -----QVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDY 129 (229)
T ss_dssp -----GCSCEEEEEECCSEECTTCCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSS
T ss_pred -----CcccCCEEEECCCeECCCCCeecCHHHHHHHHHHHHHhcCCeEEEEchhhhhhh
Confidence 1268999999999999887766544444433 1222345589999999999874
No 13
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=98.06 E-value=9e-06 Score=76.04 Aligned_cols=119 Identities=16% Similarity=0.122 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY 279 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~ 279 (396)
...+.|++.|+++|++|++|. .+.++|+..+.+...+.+.+++|.|+-| ...+..|.+.||++..+-
T Consensus 5 ~~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS------~~~a~~l~~~gi~vi~l~------ 71 (219)
T 1m0s_A 5 EMKKLAAQAALQYVKADRIVG-VGSGSTVNCFIEALGTIKDKIQGAVAAS------KESEELLRKQGIEVFNAN------ 71 (219)
T ss_dssp HHHHHHHHHHGGGCCTTSEEE-ECCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCGG------
T ss_pred HHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCh------HHHHHHHHhCCCeEEEeC------
Confidence 467889999999999999988 6888888888877654321577645543 466788888899887642
Q ss_pred hcccCCEEEEcceeEeecCCeeccccHHHHH--HHhhhCCCcEEEeccccccccc
Q 016064 280 TMDEVDMVFVGADGVVESGGIINMMGTYQIA--LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 280 ~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA--l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
.+.++|+.|+|||.|-.++++..-.|-..+- +++ .....+|+++++.||...
T Consensus 72 ~~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~-~~A~~~ivlaD~SK~~~~ 125 (219)
T 1m0s_A 72 DVSSLDIYVDGADEINPQKMMIKGGGAALTREKIVA-ALAKKFICIVDSSKQVDV 125 (219)
T ss_dssp GCSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHH-HHEEEEEEEEEGGGBCSS
T ss_pred ccccCCEEEECcCeECCCCCeecCHHHHHHHHHHHH-HhcCcEEEEEeCcHHhhc
Confidence 2268999999999999887766544443333 222 234589999999999875
No 14
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=98.00 E-value=1.5e-05 Score=74.80 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY 279 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~ 279 (396)
...+.|++.|+++|++|++|.. |.++|+..+++...+..+++++.|+-| .+.+..|.+.||++..+-+
T Consensus 11 ~~K~~iA~~A~~~V~~g~~Igl-gsGST~~~~i~~L~~~~~~itv~VtnS------~~~a~~l~~~gi~l~~l~~----- 78 (224)
T 3kwm_A 11 ELKKLAATEAAKSITTEITLGV-GTGSTVGFLIEELVNYRDKIKTVVSSS------EDSTRKLKALGFDVVDLNY----- 78 (224)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEE-CCSHHHHHHHHHGGGCTTTEEEEEESC------HHHHHHHHHTTCCBCCHHH-----
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHhhcCceEEEECCc------HHHHHHHHHcCCeEEecCc-----
Confidence 4677899999999999987665 777888888877665445677756644 3567888899998765432
Q ss_pred hcccCCEEEEcceeEeecCCeeccccHHHHH-HHhhhCCCcEEEeccccccccc
Q 016064 280 TMDEVDMVFVGADGVVESGGIINMMGTYQIA-LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 280 ~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA-l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
..++|+.|.|||.|-.+++++---|...+- -+......-|||+++..||.+.
T Consensus 79 -~~~iD~afdGADevd~~~~liKGgg~al~rEKiva~~A~~~iviaD~sK~~~~ 131 (224)
T 3kwm_A 79 -AGEIDLYIDGADECNNHKELIKGGGAALTREKICVAAAKKFICIIDESKKVNT 131 (224)
T ss_dssp -HCSEEEEEECCSEECTTSCEECCSSSCHHHHHHHHHTEEEEEEEEEGGGBCSS
T ss_pred -cccccEEEECCCccccccCeecCchhhHHHHHHHHHhcCcEEEEEeCchhhhh
Confidence 268999999999999998877644433321 2222345678999999999975
No 15
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=97.82 E-value=6.1e-05 Score=71.83 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHH---CCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQ---NKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA 276 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~---~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa 276 (396)
...+.|++.|+++|++|++|.. |.++|+..+++...+ +|.++++ |+- +.+.+..|.+.||++..+.+
T Consensus 26 e~K~~iA~~A~~~V~dg~vIgL-GsGST~~~~i~~L~~~~~~gl~Itv-Vtt------S~~ta~~l~~~GI~l~~l~~-- 95 (255)
T 3hhe_A 26 QLKKMAALKALEFVEDDMRLGI-GSGSTVNEFIPLLGERVANGLRVTC-VAT------SQYSEQLCHKFGVPISTLEK-- 95 (255)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEE-CCSHHHHHHHHHHHHHHHTTCCEEE-EES------SHHHHHHHHHTTCCBCCTTT--
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHHhhccCCcEEE-EcC------CHHHHHHHHHcCCcEEeccc--
Confidence 3567889999999999987665 777777777766543 2435553 332 34567888899999876533
Q ss_pred HHHhcccCCEEEEcceeEeecCCeeccccHHHHH-HHhhhCCCcEEEeccccccccc
Q 016064 277 VAYTMDEVDMVFVGADGVVESGGIINMMGTYQIA-LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 277 v~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA-l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
+.++|+.|.|||.|-.+.+++---|...+- =+......-|||+++..||.+.
T Consensus 96 ----~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~ 148 (255)
T 3hhe_A 96 ----IPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKT 148 (255)
T ss_dssp ----CCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSS
T ss_pred ----ccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhh
Confidence 468999999999999988776644432221 2223455679999999999875
No 16
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=97.75 E-value=5.6e-05 Score=70.90 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHC----CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN----KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS 275 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~----gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds 275 (396)
...+.|++.|+++|++|++|.. |.++|+..+++...+. +.++++ |+- +.+.+..|.+.||++..+.+
T Consensus 3 ~~K~~iA~~A~~~V~dg~vIgL-GsGST~~~~i~~L~~~~~~~~~~i~~-Vtt------S~~t~~~l~~~Gi~l~~l~~- 73 (225)
T 3l7o_A 3 ELKKIAGVRAAQYVEDGMIVGL-GTGSTAYYFVEEVGRRVQEEGLQVIG-VTT------SSRTTAQAQALGIPLKSIDE- 73 (225)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEE-CCSTTHHHHHHHHHHHHHHHCCCCEE-EES------SHHHHHHHHHHTCCBCCGGG-
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHHhhhhcCCCEEE-EcC------CHHHHHHHhccCceEEecCc-
Confidence 3567899999999999997776 6666666666655442 455665 443 33567778888999875533
Q ss_pred HHHHhcccCCEEEEcceeEeecCCeeccccHHHHH-HHhhhCCCcEEEeccccccccc
Q 016064 276 AVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIA-LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 276 av~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA-l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
..++|+.|.|||.|-.+++++---|...+- =+-.....-|||+++..||.+.
T Consensus 74 -----~~~iD~a~dGADevd~~~~liKGgG~al~rEKiva~~A~~~iviaD~sK~~~~ 126 (225)
T 3l7o_A 74 -----VDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDT 126 (225)
T ss_dssp -----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHTEEEEEEEEEGGGBCSS
T ss_pred -----ccccCEEEEcCCccCcccCeecCchhhhHHHHHHHHhCCeEEEEEecccchhh
Confidence 468999999999999998887644443321 1112345678999999999875
No 17
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=97.75 E-value=3.6e-05 Score=73.88 Aligned_cols=120 Identities=23% Similarity=0.207 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHhh-ccc--cCceEEeecChHHHHHHHHHHHHC---CC------eeEEEEeCCCCCchhHHHHHHHHhCC
Q 016064 199 YKARKIIAMLSQD-FIF--DGCTILVHGFSRVVMEVLKMAAQN---KK------LFRVLCTEGRPDRSGLRLANELAKLD 266 (396)
Q Consensus 199 ~~a~~~Ia~~a~~-~I~--dg~~ILT~~~S~~V~~~L~~A~~~---gk------~f~ViV~EsrP~~eG~~la~~L~~~G 266 (396)
....+.|++.|++ +|+ +|++|. .+.++|+..+++...+. +. +++| |+- +...+..|.+.|
T Consensus 19 ~~~K~~IA~~Aa~~~I~~~dg~~Ig-LgsGST~~~~a~~L~~~~~~~~l~~~~~~itv-VTn------S~~~a~~l~~~g 90 (264)
T 1xtz_A 19 EDAKRAAAYRAVDENLKFDDHKIIG-IGSGSTVVYVAERIGQYLHDPKFYEVASKFIC-IPT------GFQSRNLILDNK 90 (264)
T ss_dssp CHHHHHHHHHHHHHHCCTTTCCEEE-ECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEE-EES------SHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCEEE-EcChHHHHHHHHHHhHhhhccccccccCCEEE-ECC------cHHHHHHHHHCC
Confidence 3467889999998 999 999887 57777777777665432 22 3665 443 346788888889
Q ss_pred CCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHH-HhhhCCCcEEEeccccccc-cc
Q 016064 267 VPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAL-VAHSMNKPVYVAAESYKFA-RL 332 (396)
Q Consensus 267 I~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl-~Ak~~~vPvyV~aes~Kf~-~~ 332 (396)
|++..+ + .+.++|+.|+|||.|-.+++++.--|-..+-- +.......|||++++.||. +.
T Consensus 91 i~v~~l-~-----~~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~SK~~~~~ 152 (264)
T 1xtz_A 91 LQLGSI-E-----QYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKH 152 (264)
T ss_dssp CEECCT-T-----TCCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBCSSS
T ss_pred CeEEEe-h-----hcCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEcccccccc
Confidence 987665 2 23689999999999999877666655544443 2334667899999999999 53
No 18
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=97.73 E-value=6.1e-06 Score=77.16 Aligned_cols=119 Identities=15% Similarity=0.175 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY 279 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~ 279 (396)
...+.|++.|+++|++|++|. .+.++|+..+.+...+.+.+++|.|+-|-+ .+..|.+.||++..+-
T Consensus 5 ~~K~~IA~~Aa~lI~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS~~------~a~~l~~~gi~vi~l~------ 71 (219)
T 1o8b_A 5 ELKKAVGWAALQYVQPGTIVG-VGTGSTAAHFIDALGTMKGQIEGAVSSSDA------STEKLKSLGIHVFDLN------ 71 (219)
T ss_dssp ------------------CEE-ECCSCC---------------CCEEESCCC------------------CCGG------
T ss_pred HHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCcHH------HHHHHHhCCCeEEEeC------
Confidence 456789999999999999988 577777777776654322146654565543 3456666788766552
Q ss_pred hcccCCEEEEcceeEeecCCeeccccHHHHH--HHhhhCCCcEEEeccccccccc
Q 016064 280 TMDEVDMVFVGADGVVESGGIINMMGTYQIA--LVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 280 ~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA--l~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
.+.++|+.|+|||.|-.++++..--|-..+- +++ .....+|+++++.||...
T Consensus 72 ~~~~~D~af~Gadgid~~~~~~~~~~~a~~kekiv~-~~A~~~ivlaD~SK~~~~ 125 (219)
T 1o8b_A 72 EVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIA-SVAEKFICIADASKQVDI 125 (219)
T ss_dssp GCSCEEEEEECCSEECTTSCEECCCCC-HHHHHHHH-HHEEEEEEEEEGGGBCSS
T ss_pred ccCcCCEEEECcceECCCCCeecCHHHHHHHHHHHH-HhcCcEEEEEeCcccccc
Confidence 1368999999999999988776444444433 223 234489999999999875
No 19
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=97.62 E-value=0.00017 Score=67.62 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=81.3
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHC----CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN----KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS 275 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~----gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds 275 (396)
...+.|++.|+++|++|++|.. +.++|+..+++...+. +.++++ |+- +...+..|.+.||++.-+.+
T Consensus 5 ~~K~~iA~~A~~~I~~g~~Igl-gsGST~~~~~~~L~~~~~~~~l~itv-Vtn------S~~~a~~l~~~gi~v~~l~~- 75 (226)
T 2pjm_A 5 DLKLKVAKEAVKLVKDGMVIGL-GTGSTAALFIRELGNRIREEELTVFG-IPT------SFEAKMLAMQYEIPLVTLDE- 75 (226)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEE-CCSHHHHHHHHHHHHHHHHHTCCCEE-EES------SHHHHHHHHHTTCCBCCTTT-
T ss_pred HHHHHHHHHHHHHCCCCCEEEE-CCCHHHHHHHHHHHhhhhccCCcEEE-EeC------cHHHHHHHHhcCCeEEeecc-
Confidence 4677899999999999988775 6666766666655432 335554 332 34667888899998773321
Q ss_pred HHHHhcccCCEEEEcceeEeec-CCeeccccHHHH-HHHhhhCCCcEEEeccccccccc
Q 016064 276 AVAYTMDEVDMVFVGADGVVES-GGIINMMGTYQI-ALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 276 av~~~m~~vd~VlvGAd~V~~N-G~v~nkiGT~~l-Al~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
++ +|+.|.|||.|-.+ +.++---|...+ --+......-|+|+++..||.+.
T Consensus 76 -----~~-iD~afdGaDevd~~t~~likGgg~al~rEKiva~~A~~~IviaD~sK~~~~ 128 (226)
T 2pjm_A 76 -----YD-VDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKK 128 (226)
T ss_dssp -----CC-CSEEEECCSEEETTTCCEECCTTSCHHHHHHHHHHSSEEEEEEEGGGEESS
T ss_pred -----cc-CCEEEEcCceeccccCceeeccchhhHHHHHHHHHhCcEEEEEecchhhhc
Confidence 35 99999999999999 777554443222 11122344578999999999875
No 20
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=97.28 E-value=0.0006 Score=64.43 Aligned_cols=115 Identities=20% Similarity=0.265 Sum_probs=82.0
Q ss_pred HHHHHHHHHhhcccc----CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH
Q 016064 201 ARKIIAMLSQDFIFD----GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA 276 (396)
Q Consensus 201 a~~~Ia~~a~~~I~d----g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa 276 (396)
..+.+++.|+++|++ |++|-. |-.+|+..++....+..++++.+|+- +.+.+..|.+.||++..+-+
T Consensus 14 ~K~~aA~~A~~~V~d~~~~g~vIGL-GtGST~~~~i~~L~~~~~~i~~~V~t------S~~t~~~~~~~Gi~l~~l~~-- 84 (239)
T 3uw1_A 14 LKRLVGEAAARYVTDNVPQGAVIGV-GTGSTANCFIDALAAVKDRYRGAVSS------SVATTERLKSHGIRVFDLNE-- 84 (239)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCEEEE-CCSHHHHHHHHHHHTTGGGSCEEEES------SHHHHHHHHHTTCCBCCGGG--
T ss_pred HHHHHHHHHHHHhhccCcCCCEEEE-CccHHHHHHHHHHHhhhccceEEeCC------cHHHHHHHHHcCCcEEeccc--
Confidence 456777778888888 887665 77778888887776543455544443 34668888999999865432
Q ss_pred HHHhcccCCEEEEcceeEeecCCeeccccH-----HHHHHHhhhCCCcEEEeccccccccc
Q 016064 277 VAYTMDEVDMVFVGADGVVESGGIINMMGT-----YQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 277 v~~~m~~vd~VlvGAd~V~~NG~v~nkiGT-----~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
..++|+.|.|||.|-.++.++---|- -.+|-. ..-|||+++..||.+.
T Consensus 85 ----~~~iD~a~DGADeVd~~l~lIKGgGgal~rEKiva~~----A~~~ivIaD~sK~v~~ 137 (239)
T 3uw1_A 85 ----IESLQVYVDGADEIDESGAMIKGGGGALTREKIVASV----AETFVCIADASKRVAM 137 (239)
T ss_dssp ----CSCEEEEEECCSEECTTCCEECCSSSCHHHHHHHHHH----EEEEEEEEEGGGBCSS
T ss_pred ----ccccCEEEECCcccCcccCEecCchHHHHHHHHHHHh----CCcEEEEEecchhhhh
Confidence 36899999999999998877663332 223333 3468999999999875
No 21
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=94.53 E-value=0.25 Score=46.16 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHC----CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN----KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS 275 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~----gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds 275 (396)
...+..+..|++++++|.+ +=.|-.+||..++....+. +. .+.++-| +.+.+..+.+.|||+.-+.+
T Consensus 6 ~~K~~aa~~A~~~V~~gmv-vGlGTGSTv~~~i~~L~~~~~~~~l--~i~~V~t-----S~~t~~~a~~~Gi~l~~l~~- 76 (228)
T 4gmk_A 6 ELKQLVGTKAVEWIKDGMI-VGLGTGSTVKYMVDALGKRVNEEGL--DIVGVTT-----SIRTAEQAKSLGIVIKDIDE- 76 (228)
T ss_dssp HHHHHHHHHHGGGCCTTCE-EEECCSHHHHHHHHHHHHHHHHHCC--CCEEEES-----SHHHHHHHHHTTCCBCCGGG-
T ss_pred HHHHHHHHHHHHhCCCCCE-EEECchHHHHHHHHHHHHHHhhcCC--cEEEEeC-----cHHHHHHHHHcCCceeChHH-
Confidence 3556778888999999974 5567788888777765432 33 3333322 23566777888999876655
Q ss_pred HHHHhcccCCEEEEcceeEeecCCeeccccH-----HHHHHHhhhCCCcEEEeccccccccc
Q 016064 276 AVAYTMDEVDMVFVGADGVVESGGIINMMGT-----YQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 276 av~~~m~~vd~VlvGAd~V~~NG~v~nkiGT-----~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
..++|..|=|||-|-.|..++--=|- -.+|.+|++ |+|+++..|+.+.
T Consensus 77 -----~~~iD~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~~----fI~IaD~sK~v~~ 129 (228)
T 4gmk_A 77 -----VDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNK----NMWIVDESKMVDD 129 (228)
T ss_dssp -----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEE----EEEEEEGGGBCSS
T ss_pred -----CCccceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhhh----eEEEeccccccCc
Confidence 36899999999999999887765553 345555554 7999999999875
No 22
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=89.42 E-value=1.2 Score=41.61 Aligned_cols=115 Identities=17% Similarity=0.186 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCC--CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHH
Q 016064 201 ARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNK--KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVA 278 (396)
Q Consensus 201 a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~g--k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~ 278 (396)
..+..+..|.++|++|.+ +=.|-.+||..++....+.. ....|.++.+ +.+.+..+.+.|||+..+.+
T Consensus 6 ~K~~aa~~A~~~V~~gmv-vGlGTGSTv~~~I~~L~~~~~~~~l~i~~v~t-----S~~t~~~a~~~gi~l~~l~~---- 75 (226)
T 3ixq_A 6 LKLKVAKEAVKLVKDGMV-IGLGTGSTAALFIRELGNRIREEELTVFGIPT-----SFEAKMLAMQYEIPLVTLDE---- 75 (226)
T ss_dssp HHHHHHHHHGGGCCTTCE-EEECCSHHHHHHHHHHHHHHHHHTCCCEEEES-----SHHHHHHHHHTTCCBCCTTT----
T ss_pred HHHHHHHHHHHhCCCCCE-EEeCcHHHHHHHHHHHHHhhhhcCCeeEeecc-----cHHHHHHHHhcCCCcccccc----
Confidence 456678888999999975 56688888888887664421 1233444433 23445666778999866543
Q ss_pred HhcccCCEEEEcceeEee-cCCeeccccHH-----HHHHHhhhCCCcEEEeccccccccc
Q 016064 279 YTMDEVDMVFVGADGVVE-SGGIINMMGTY-----QIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 279 ~~m~~vd~VlvGAd~V~~-NG~v~nkiGT~-----~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
. .+|..|=|||-|-. +-.++--=|-. .+|. ....|+|+++..|+.+.
T Consensus 76 --~-~iDl~iDGADEvd~~~l~lIKGGGgAl~rEKivA~----~a~~~I~I~D~sK~v~~ 128 (226)
T 3ixq_A 76 --Y-DVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDY----NANEFVVLVDESKLVKK 128 (226)
T ss_dssp --C-CCSEEEECCSEEETTTCCEECCTTSCHHHHHHHHH----HSSEEEEEEEGGGEESS
T ss_pred --c-cccEEEeCcchhccccceEEecchHHHHHHHHHHH----HhhheEEEeccccchhh
Confidence 1 38999999999974 32333322322 2333 34567999999998764
No 23
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=88.22 E-value=4.4 Score=40.77 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=55.3
Q ss_pred EEeecChHHHHHHHHHHHHCCC------eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-------c-hHHHHhcccC
Q 016064 219 ILVHGFSRVVMEVLKMAAQNKK------LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-------D-SAVAYTMDEV 284 (396)
Q Consensus 219 ILT~~~S~~V~~~L~~A~~~gk------~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-------D-sav~~~m~~v 284 (396)
++|.|.+..+...++.+.+.|+ +-+|++.+ |.+.+.. +.+...|+++..++ | .++-..+.+-
T Consensus 164 ~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~--~~~~~~~--~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 239 (514)
T 3mad_A 164 TVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPV--SAHAAFD--KAAQYFGIKLVRTPLDADYRADVAAMREAITPN 239 (514)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEET--TSCTHHH--HHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred EEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC--ccchHHH--HHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC
Confidence 7777777777777766654331 14666543 4444433 33444588888776 2 3344445432
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
.++|+....-...|.+.. --.++-+|++++++++|=
T Consensus 240 ~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 240 TVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp EEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred CEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEe
Confidence 344433322222344433 257888899999999873
No 24
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=85.73 E-value=2.6 Score=39.30 Aligned_cols=98 Identities=16% Similarity=0.099 Sum_probs=59.6
Q ss_pred HHHhhccccCceEEeecCh--HHHHHHHHHHHHC-CCeeEEEEeCC---------------------CCCchhHHHHHHH
Q 016064 207 MLSQDFIFDGCTILVHGFS--RVVMEVLKMAAQN-KKLFRVLCTEG---------------------RPDRSGLRLANEL 262 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S--~~V~~~L~~A~~~-gk~f~ViV~Es---------------------rP~~eG~~la~~L 262 (396)
+.+.++|+||++|++.|+. +.-..++....++ -+.++++-... .+......+.+..
T Consensus 12 ~eAv~~IkdG~tV~~gGf~~~g~P~~li~aL~~~~~kdLtli~~~~g~~~~g~~~L~~~G~v~r~i~s~~g~~~~~~~~~ 91 (235)
T 3rrl_A 12 DKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKKIIASYVGENKIFESQM 91 (235)
T ss_dssp HHHHTTCCTTCEEEECCBTTBTCCHHHHHHHHHHTCCSEEEECSCCCCSSSGGGGGGTTTCEEEEEESCCCSCHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCcCccCCHHHHHHHHHhcCCCcEEEEEcCCCCCCcCHHHHHhCCCeeEEEeccccCCHHHHHHH
Confidence 3456789999999998853 3333333333333 36677774311 1222234555555
Q ss_pred HhCCCCEEEEcchHHHHhc---------------------------------------ccCCEEEEcceeEeecCCeecc
Q 016064 263 AKLDVPVKLLIDSAVAYTM---------------------------------------DEVDMVFVGADGVVESGGIINM 303 (396)
Q Consensus 263 ~~~GI~vtlI~Dsav~~~m---------------------------------------~~vd~VlvGAd~V~~NG~v~nk 303 (396)
.+-.|++..++-+.++..+ -++|..|+.|...-.+|.+.-.
T Consensus 92 ~~G~ie~~~~pqg~la~~~rag~~G~P~~~t~~glgT~v~~gk~~~~~~G~~~l~~~a~~~DvAli~a~~aD~~GN~~~~ 171 (235)
T 3rrl_A 92 LNGEIEVVLTPQGTLAENLHAGGAGIPAYYTPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSDTLGNLVFR 171 (235)
T ss_dssp HHTSSEEEECCHHHHHHHHHHHHHTCCEEEESTTTTSGGGTTCCEEEETTEEEEEEECCCEEEEEEECSEEETTCCEECC
T ss_pred HcCCeEEEECCHHHHHHHHHHHhCCCCEEEeccccCcccccCceEEeeCCEEEEEEcCCCCeEEEEEeeecCCCceEEEe
Confidence 4445666665554444332 1789999999999999988764
Q ss_pred c
Q 016064 304 M 304 (396)
Q Consensus 304 i 304 (396)
.
T Consensus 172 ~ 172 (235)
T 3rrl_A 172 K 172 (235)
T ss_dssp G
T ss_pred c
Confidence 3
No 25
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=85.54 E-value=5.3 Score=32.35 Aligned_cols=61 Identities=26% Similarity=0.419 Sum_probs=36.8
Q ss_pred HHHHHhCCCCE---EE-EcchHHHH----hcc--cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEe
Q 016064 259 ANELAKLDVPV---KL-LIDSAVAY----TMD--EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 259 a~~L~~~GI~v---tl-I~Dsav~~----~m~--~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ 323 (396)
.+.+.+.|+++ +. +.....+. ..+ ++|++++|+.. .|++-. -.|+..-.+ .++.++||+|+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~---~~~~~~~~~Gs~~~~v-l~~~~~pVlvV 147 (147)
T 3hgm_A 76 KTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG---TNGDKSLLLGSVAQRV-AGSAHCPVLVV 147 (147)
T ss_dssp HHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC---TTCCSCCCCCHHHHHH-HHHCSSCEEEC
T ss_pred HHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC---CccccceeeccHHHHH-HhhCCCCEEEC
Confidence 44556789887 43 33222222 223 89999999975 233333 257765555 55567999985
No 26
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.50 E-value=3.7 Score=38.88 Aligned_cols=102 Identities=10% Similarity=0.109 Sum_probs=65.3
Q ss_pred CceEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCC--CchhHHHHHHHHhCCCCEEEEc--c-hHHHHhcccCCEEEE
Q 016064 216 GCTILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRP--DRSGLRLANELAKLDVPVKLLI--D-SAVAYTMDEVDMVFV 289 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP--~~eG~~la~~L~~~GI~vtlI~--D-sav~~~m~~vd~Vlv 289 (396)
+.+||..|-++.+-..|.+ +.+.| .+|+++...+ ..+-......|...|+.+.... | .++..++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence 3578888988876654443 44556 5666654444 2223334567777887665432 2 3455566621
Q ss_pred cceeEeecCCeeccccHHHHHHHhhhCC-CcEEEec
Q 016064 290 GADGVVESGGIINMMGTYQIALVAHSMN-KPVYVAA 324 (396)
Q Consensus 290 GAd~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~a 324 (396)
|+|.|+.+.+..|-.|+..+.-+|+..+ ++.+|.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 4555555566679999999999999999 9988863
No 27
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=84.87 E-value=11 Score=30.34 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=55.7
Q ss_pred eEEeecChHHHHHHHHH----HHHCCCeeEEE-EeCCCCCc-----------------hhH----HHHHHHHhCCC-CEE
Q 016064 218 TILVHGFSRVVMEVLKM----AAQNKKLFRVL-CTEGRPDR-----------------SGL----RLANELAKLDV-PVK 270 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~----A~~~gk~f~Vi-V~EsrP~~-----------------eG~----~la~~L~~~GI-~vt 270 (396)
+++-+..|..-...|.. |...+..+.++ |.+..+.. ++. ++...+.+.|+ +++
T Consensus 8 ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~ 87 (146)
T 3s3t_A 8 ILVPVDSSDAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVATTSAPNLK 87 (146)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCE
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCcceE
Confidence 44445666654444443 33346677766 55543321 111 22344556788 766
Q ss_pred EEc--c---hHHHH-hc--ccCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEe
Q 016064 271 LLI--D---SAVAY-TM--DEVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 271 lI~--D---sav~~-~m--~~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ 323 (396)
... . ..+.. .. .++|++++|+..- |++-. -.|+..-.+ .++.++||+|+
T Consensus 88 ~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~~v-l~~~~~pVlvV 145 (146)
T 3s3t_A 88 TEISYGIPKHTIEDYAKQHPEIDLIVLGATGT---NSPHRVAVGSTTSYV-VDHAPCNVIVI 145 (146)
T ss_dssp EEEEEECHHHHHHHHHHHSTTCCEEEEESCCS---SCTTTCSSCHHHHHH-HHHCSSEEEEE
T ss_pred EEEecCChHHHHHHHHHhhcCCCEEEECCCCC---CCcceEEEcchHHHH-hccCCCCEEEe
Confidence 432 1 22333 33 5799999999762 22222 257765555 45667999986
No 28
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=84.15 E-value=3 Score=36.71 Aligned_cols=100 Identities=10% Similarity=0.114 Sum_probs=57.4
Q ss_pred eEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc--hHHHHhcccCCEEEEcce
Q 016064 218 TILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID--SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D--sav~~~m~~vd~VlvGAd 292 (396)
+||..|-|+-+-..|.+ +.++| .+|+++.-++...- .+ .++.+... .| ..+..++.++|.||--|-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~-----~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQVP-----QY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGGSC-----CC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccchh-----hc--CCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 57777877766554444 33334 67776654432110 00 23322221 12 345556777787776554
Q ss_pred eEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 293 GVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 293 ~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
....+---+|-.|+..+.-+|++.+++-+|...+
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 73 SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 3333333458899999999999999876665444
No 29
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=83.34 E-value=19 Score=30.03 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=58.5
Q ss_pred ceEEeecC-hHHHHHHHHHH----HHCCCeeEEE-EeCCCCC-c-----hhH----HHHHHHHhCCCCEEE---EcchHH
Q 016064 217 CTILVHGF-SRVVMEVLKMA----AQNKKLFRVL-CTEGRPD-R-----SGL----RLANELAKLDVPVKL---LIDSAV 277 (396)
Q Consensus 217 ~~ILT~~~-S~~V~~~L~~A----~~~gk~f~Vi-V~EsrP~-~-----eG~----~la~~L~~~GI~vtl---I~Dsav 277 (396)
.+++-+.. |..-...|..| ...+..+.++ |.+..+. . ++. ++.+.+.+.|+++.. +.....
T Consensus 26 ~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~ 105 (155)
T 3dlo_A 26 PIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEP 105 (155)
T ss_dssp CEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCH
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCH
Confidence 35555667 76655555444 3336667766 5554321 1 122 234556678998764 322222
Q ss_pred ----HHhcc--cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEe
Q 016064 278 ----AYTMD--EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 278 ----~~~m~--~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ 323 (396)
..... ++|.|++|+..-- ++-. -.|+..-.+ .++..+||+|+
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~~---~~~~~~lGSv~~~v-l~~a~~PVLvV 154 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKRS---PTGKLIFGSVARDV-ILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEEC---TTSCEECCHHHHHH-HHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCC---CCCCEEeccHHHHH-HHhCCCCEEEe
Confidence 22233 8999999998742 2222 257655444 56778999986
No 30
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.10 E-value=14 Score=28.45 Aligned_cols=99 Identities=17% Similarity=0.156 Sum_probs=62.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--c-hHHHHhcccCCEEEEcce
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--D-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--D-sav~~~m~~vd~VlvGAd 292 (396)
+.+|+..|.+..=..+...+.+.| .++|++.+..|. -+..+.+.|+...... | ..+...+.++|.||..+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~- 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLA-----ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA- 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHH-----HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHH-----HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC-
Confidence 457888888444444555555555 367887765432 1234446676553322 2 34556678888888765
Q ss_pred eEeecCCeeccccHHHHHHHhhhCCCcEEEeccccccc
Q 016064 293 GVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFA 330 (396)
Q Consensus 293 ~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~ 330 (396)
| ...+..++..|...+++++.++....+.
T Consensus 78 -----~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 106 (118)
T 3ic5_A 78 -----P----FFLTPIIAKAAKAAGAHYFDLTEDVAAT 106 (118)
T ss_dssp -----C----GGGHHHHHHHHHHTTCEEECCCSCHHHH
T ss_pred -----C----chhhHHHHHHHHHhCCCEEEecCcHHHH
Confidence 1 2246888999999999999887655443
No 31
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.93 E-value=2.7 Score=37.40 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=58.9
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCC-CEEEEcchH--HHHhcccCCEEEEc
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDV-PVKLLIDSA--VAYTMDEVDMVFVG 290 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI-~vtlI~Dsa--v~~~m~~vd~VlvG 290 (396)
.|.+||..|-|+-+-..| +.+.++| .+|+++.-++.. ...|.+.|+ .+ +..|-. +...++++|.||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~-----~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~D~vi-- 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQ-----GPELRERGASDI-VVANLEEDFSHAFASIDAVV-- 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGG-----HHHHHHTTCSEE-EECCTTSCCGGGGTTCSEEE--
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHH-----HHHHHhCCCceE-EEcccHHHHHHHHcCCCEEE--
Confidence 467888889887765544 4444545 577766544332 234555676 33 334432 223344455554
Q ss_pred ceeEeecCCee-----------ccccHHHHHHHhhhCCCcEEEecccc
Q 016064 291 ADGVVESGGII-----------NMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 291 Ad~V~~NG~v~-----------nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
.+.+.. |-.|+..+.-+|+..+++-+|...++
T Consensus 90 -----~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 90 -----FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp -----ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred -----ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 444433 77899999999999888877776664
No 32
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=82.82 E-value=2.3 Score=43.73 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=49.6
Q ss_pred HHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH-----------
Q 016064 208 LSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA----------- 276 (396)
Q Consensus 208 ~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa----------- 276 (396)
.+...|+.||+++..|....+.++........+.-+|+|+-. +.-|..+|+.|.+.|++|++|-...
T Consensus 315 ~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~ 392 (565)
T 4gx0_A 315 QRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGH--GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVY 392 (565)
T ss_dssp --------------------------------CCCCEEEECC--SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEE
T ss_pred CCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCCCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEE
Confidence 344567889999999988877666544332212256666644 5668999999999999999987321
Q ss_pred --------H-HHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 277 --------V-AYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 277 --------v-~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
+ ..-+.++|.|++..+. ..=+..+++.||+.+.+..+++
T Consensus 393 gD~t~~~~L~~agi~~ad~vi~~~~~---------d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 393 GDATVGQTLRQAGIDRASGIIVTTND---------DSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp SCSSSSTHHHHHTTTSCSEEEECCSC---------HHHHHHHHHHHHHHCSSSEEEE
T ss_pred eCCCCHHHHHhcCccccCEEEEECCC---------chHHHHHHHHHHHHCCCCEEEE
Confidence 1 1123566766665542 3456778899999987755544
No 33
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=81.71 E-value=8.8 Score=36.18 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhccccCceEEe-ecChHHHHHHHHHHHHCCCeeEEEEeCC-----CCCc---hhHHHHHHHHhCCCCEEE
Q 016064 201 ARKIIAMLSQDFIFDGCTILV-HGFSRVVMEVLKMAAQNKKLFRVLCTEG-----RPDR---SGLRLANELAKLDVPVKL 271 (396)
Q Consensus 201 a~~~Ia~~a~~~I~dg~~ILT-~~~S~~V~~~L~~A~~~gk~f~ViV~Es-----rP~~---eG~~la~~L~~~GI~vtl 271 (396)
.++.|+.++++.|+||++|-+ +|-...|..++.... ++.+.+. .|+ .|.. .+... .+.. ...-
T Consensus 7 ~~e~Ia~~aA~~i~dG~~v~lGiGiP~~va~~~~~~~--~~~l~l~-~E~G~lg~~p~~~~~~~~d~--~~~~---~a~~ 78 (260)
T 1poi_B 7 NKEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVY--APDCHII-VESGLMDCSPVEVPRSVGDL--RFMA---HCGC 78 (260)
T ss_dssp HHHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTT--CTTCEEE-ETTTEEEECCSSCCSSTTCH--HHHT---SEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHHhc--CCCEEEE-EeCceecCcccCcccCccCC--CcEe---ehhh
Confidence 467899999999999998776 442333444544322 3445444 343 3421 11111 1111 2434
Q ss_pred Ecch-HHHHh-----c--ccCCEEEEcceeEeecCCee
Q 016064 272 LIDS-AVAYT-----M--DEVDMVFVGADGVVESGGII 301 (396)
Q Consensus 272 I~Ds-av~~~-----m--~~vd~VlvGAd~V~~NG~v~ 301 (396)
+.++ ..+.+ + .++|..|+||=-|-.+|.+-
T Consensus 79 ~~~~~~~fd~~~~~~~~~g~~Dv~ilGa~qVD~~Gnvn 116 (260)
T 1poi_B 79 IWPNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVN 116 (260)
T ss_dssp ECCHHHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEE
T ss_pred hcCHHHHhcccchhhhhcCCccEEEeChHHhCCCCCcc
Confidence 4444 33334 3 68999999999999999988
No 34
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=79.79 E-value=2.1 Score=39.14 Aligned_cols=94 Identities=17% Similarity=0.246 Sum_probs=56.2
Q ss_pred HHHHHHHHhhccccCceEEe-ecChHHHHHHHHHHHHCCCeeEEEEeCCC-----CCc-hhHHHHHHHHhCCCC------
Q 016064 202 RKIIAMLSQDFIFDGCTILV-HGFSRVVMEVLKMAAQNKKLFRVLCTEGR-----PDR-SGLRLANELAKLDVP------ 268 (396)
Q Consensus 202 ~~~Ia~~a~~~I~dg~~ILT-~~~S~~V~~~L~~A~~~gk~f~ViV~Esr-----P~~-eG~~la~~L~~~GI~------ 268 (396)
++.|+..++..|+||++|-. +|-...|..++. ++.+. +..|+- |.. +|.. =..|...|-.
T Consensus 2 r~~Ia~raA~el~dG~~vnlGIGiP~~va~~~~-----~~~v~-l~~E~G~~g~~p~p~~~~~-d~~~in~G~~~~t~~~ 74 (207)
T 3rrl_B 2 REAIIKRAAKELKEGMYVNLGIGLPTLVANEVS-----GMNIV-FQSENGLLGIGAYPLEGSV-DADLINAGKETITVVP 74 (207)
T ss_dssp HHHHHHHHHTTCCTTCEEEECTTGGGGGGGGGS-----SSCCE-EEETTTEEEECCCCCTTCC-CTTCBCTTSBBCCEEE
T ss_pred hHHHHHHHHHhCCCCCEEEECCChHHHHHHhcc-----CCcEE-EEeccceecCcCCCCcccc-CHhHeecCCceeeecC
Confidence 57899999999999986654 453444444443 44433 345654 221 1111 1223333421
Q ss_pred EEEEcchHHHHhc---ccCCEEEEcceeEeecCCeec
Q 016064 269 VKLLIDSAVAYTM---DEVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 269 vtlI~Dsav~~~m---~~vd~VlvGAd~V~~NG~v~n 302 (396)
-.-+.|++-..-| .++|..++||--|-.+|.+-+
T Consensus 75 ~~~~~~~~~~F~~~~gG~~Dvailga~qVD~~Gnvn~ 111 (207)
T 3rrl_B 75 GASFFNSADSFAMIRGGHIDLAILGGMEVSQNGDLAN 111 (207)
T ss_dssp EEEECCHHHHHHHHHTTCCSEEEECCSEEETTSCEEC
T ss_pred CceeeCCHHHHHHHhCCCeeEEEECHHHHCcCCCccc
Confidence 2334565544434 689999999999999998864
No 35
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=79.67 E-value=34 Score=32.33 Aligned_cols=101 Identities=15% Similarity=0.028 Sum_probs=53.3
Q ss_pred CceEEeecChHHHHHHHHHHHH--CCCeeEEEEeCCCCCchhHH--HHHHHHhCCCCEEEEcc--------hHHHHhcc-
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ--NKKLFRVLCTEGRPDRSGLR--LANELAKLDVPVKLLID--------SAVAYTMD- 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~--~gk~f~ViV~EsrP~~eG~~--la~~L~~~GI~vtlI~D--------sav~~~m~- 282 (396)
..+++|.|.+..+..++..+.+ -++.-+|++.+ |.+.|.. +.......|+++..++. ..+-..+.
T Consensus 91 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 168 (420)
T 1t3i_A 91 REIVYTRNATEAINLVAYSWGMNNLKAGDEIITTV--MEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE 168 (420)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEET--TCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT
T ss_pred CeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECc--chhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC
Confidence 4577776666666666655510 12223566553 4555532 22223346887777652 23333343
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...-...|.+.. -..++-+|+++++++++
T Consensus 169 ~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 169 KTKLVTV-VHISNTLGCVNP---AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp TEEEEEE-ESBCTTTCBBCC---HHHHHHHHHHTTCEEEE
T ss_pred CceEEEE-eCCcccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3333333 221122344444 36778889999998876
No 36
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=79.19 E-value=29 Score=30.01 Aligned_cols=36 Identities=8% Similarity=-0.063 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCCEEEEcchHHHHhccc---CCEEEEcc
Q 016064 256 LRLANELAKLDVPVKLLIDSAVAYTMDE---VDMVFVGA 291 (396)
Q Consensus 256 ~~la~~L~~~GI~vtlI~Dsav~~~m~~---vd~VlvGA 291 (396)
.++++.+++.|+++..|++..-+.+.+. +|.+|.-.
T Consensus 130 i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~ 168 (199)
T 1x92_A 130 IQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVP 168 (199)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeC
Confidence 4668889999999999998655555555 99887643
No 37
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=78.54 E-value=20 Score=37.16 Aligned_cols=148 Identities=19% Similarity=0.184 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhcc------ccCceEEe-ec-ChHHHHHHHHHH-HHCCCeeEE---EEeCCCCCchhHHHHHHHHhCCCC
Q 016064 201 ARKIIAMLSQDFI------FDGCTILV-HG-FSRVVMEVLKMA-AQNKKLFRV---LCTEGRPDRSGLRLANELAKLDVP 268 (396)
Q Consensus 201 a~~~Ia~~a~~~I------~dg~~ILT-~~-~S~~V~~~L~~A-~~~gk~f~V---iV~EsrP~~eG~~la~~L~~~GI~ 268 (396)
..+.|+.+++++| +||.++=+ +| -+..|...|..- ..-+-.=++ -+.+ -...|.++|.-
T Consensus 252 ~~~~IA~~~a~~i~~~g~l~dG~~lqlGiG~ip~aV~~~L~~~~~~l~i~se~g~~g~~~---------~~~~lieaG~i 322 (519)
T 2hj0_A 252 KELLIAEYAAKVITSSPYYKEGFSFQTGTGGASLAVTRFMREQMIKDDIKANFALGGITN---------AMVELLEEGLV 322 (519)
T ss_dssp HHHHHHHHHHHHHHTSTTCSTTCEEECCSSHHHHHHHHHHHHHHHHSCCCEEEECSEECH---------HHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEeccChHHHHHHHHHhhhcccceeeeceeccCcCh---------hHHHHHHCCCC
Confidence 5678999999986 99965544 33 234577777654 333333222 0111 12344455531
Q ss_pred E-E--------------------EEcchHHHH--------hcccCCEEEEcceeEeecCCeeccc-----------cHHH
Q 016064 269 V-K--------------------LLIDSAVAY--------TMDEVDMVFVGADGVVESGGIINMM-----------GTYQ 308 (396)
Q Consensus 269 v-t--------------------lI~Dsav~~--------~m~~vd~VlvGAd~V~~NG~v~nki-----------GT~~ 308 (396)
- . .+.+++..| .+++.|..|+||==|-.+|.+-+-. |...
T Consensus 323 ~~~~~~~~f~~G~~~~~~~n~~~~~~~~~~~~~n~~n~p~~i~~ldv~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D 402 (519)
T 2hj0_A 323 DKILDVQDFDHPSAVSLDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCD 402 (519)
T ss_dssp EEEEESEESSHHHHHHHHHTTTTEEECCHHHHHCSSSSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHH
T ss_pred CCCccccccccchHHHHHhCcHhhEEEchHHhhccCCCHHHhccCCeeeeeeEEEccCCceeeeeccCCeEecccccHHH
Confidence 1 1 233444455 4689999999999888888877765 3345
Q ss_pred HHHHhhhCCCcEEEecccccccccccCCCCCCCCCcccCCCCCcCCCCccccccceeccCCCCccEEEeCCCCCC-Cc
Q 016064 309 IALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLT-PS 385 (396)
Q Consensus 309 lAl~Ak~~~vPvyV~aes~Kf~~~~p~~~~d~~~~~~~~~~~~~~~~~~~v~np~fD~tPpelIt~iITE~Gv~~-Ps 385 (396)
++.-|+. ++++.++.| .+ ..+.++ .+ .+=.||-+.++.||||.|++. +.
T Consensus 403 ~~~gA~~----~ii~~~~t~--g~----------~skiV~-------~~-----~~vtt~~~~V~~VVTE~Gva~~l~ 452 (519)
T 2hj0_A 403 TAFAAKM----SLVISPLVR--GR----------IPTFVD-------KV-----NTVITPGTSVDVVVTEVGIAINPN 452 (519)
T ss_dssp HHHHSSE----EEEECCSEE--TT----------EESBCS-------SC-----SSCSBCGGGCCEEECSSCEEECTT
T ss_pred HhhccCe----EEEEEcccC--CC----------CCeecc-------CC-----CCcccCCCCCCEEECCCEEEECCC
Confidence 5666653 667766553 00 001111 00 122456779999999999998 54
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=78.37 E-value=11 Score=35.44 Aligned_cols=101 Identities=8% Similarity=0.076 Sum_probs=57.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc------------hHHHHhcc
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID------------SAVAYTMD 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D------------sav~~~m~ 282 (396)
...+++|-|.+..+..++..+.+.|. +|++.+ |.+.|... .+...|.++..++- ..+-..+.
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 163 (391)
T 4dq6_A 90 SEWLIYSPGVIPAISLLINELTKAND--KIMIQE--PVYSPFNS--VVKNNNRELIISPLQKLENGNYIMDYEDIENKIK 163 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTTC--EEEECS--SCCTHHHH--HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred HHHeEEcCChHHHHHHHHHHhCCCCC--EEEEcC--CCCHHHHH--HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence 44677777766666666665543343 565543 66666544 33456777666542 23444455
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+ .++++=...-...|.++..---..++-+|+++++++++
T Consensus 164 ~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 164 D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEe
Confidence 5 44333222222345555444455677789999998887
No 39
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=78.24 E-value=8.7 Score=37.08 Aligned_cols=104 Identities=9% Similarity=-0.026 Sum_probs=59.0
Q ss_pred ccCceEEeecChHHHHHHHHHHH--HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhc-
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAA--QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTM- 281 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~--~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m- 281 (396)
....+++|-|.+..+..++..+. +.|...+|++. .|.+.|... .+...|.++..++- .++...+
T Consensus 104 ~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 104 PARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFI--DPGFNLNKL--QCRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEE--ESCCHHHHH--HHHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred CcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEe--CCCcHhHHH--HHHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 34568888777776666666554 44542256655 466666443 33455887777753 1233333
Q ss_pred -ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 282 -DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+...|++. .--...|.+...---..++-+|+++++.+++
T Consensus 180 ~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 180 TGQFCSIIYS-NPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp TTCCCEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCceEEEEe-CCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 355666552 1222334444333344567789999998887
No 40
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=76.87 E-value=6.9 Score=31.39 Aligned_cols=61 Identities=10% Similarity=0.192 Sum_probs=35.8
Q ss_pred HHHHHhCCCCEEEEc-c----hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 259 ANELAKLDVPVKLLI-D----SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 259 a~~L~~~GI~vtlI~-D----sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
.+.+.+.|++++... . .++.....++|++++|+..- |++-...|+..-.+ .++..+||+|+
T Consensus 72 ~~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~~---~~~~~~~Gs~~~~v-l~~~~~pVlvv 137 (138)
T 3idf_A 72 STFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSEN---SFLNKIFASHQDDF-IQKAPIPVLIV 137 (138)
T ss_dssp HHHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCTT---STTSSCCCCTTCHH-HHHCSSCEEEE
T ss_pred HHHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCCc---chHHHHhCcHHHHH-HhcCCCCEEEe
Confidence 344556788875432 1 22333336999999999752 23322226544444 45667999985
No 41
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=76.69 E-value=12 Score=31.81 Aligned_cols=93 Identities=17% Similarity=0.180 Sum_probs=62.0
Q ss_pred ccCceEEeecChH--HHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhc
Q 016064 214 FDGCTILVHGFSR--VVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTM 281 (396)
Q Consensus 214 ~dg~~ILT~~~S~--~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m 281 (396)
..| ++++.+... -+..+.+... ...|+++.+++ .++.|.+.||+|+.+.. ..+..++
T Consensus 24 ~~g-vliSv~d~dK~~l~~~a~~l~--~lGf~i~AT~G--------Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i 92 (143)
T 2yvq_A 24 QKG-ILIGIQQSFRPRFLGVAEQLH--NEGFKLFATEA--------TSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI 92 (143)
T ss_dssp CSE-EEEECCGGGHHHHHHHHHHHH--TTTCEEEEEHH--------HHHHHHHTTCCCEEECCGGGC-----CBCHHHHH
T ss_pred CCC-EEEEecccchHHHHHHHHHHH--HCCCEEEECch--------HHHHHHHcCCeEEEEEeccCCCcccccccHHHHH
Confidence 456 777766532 2444444444 34689887743 36788899999999864 2355545
Q ss_pred --ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 282 --DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 282 --~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+++|+||--.+. +--...-.+.+--+|=.|+||++-
T Consensus 93 ~~g~i~lVInt~~~-----~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 93 RDGSIDLVINLPNN-----NTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HTTSCCEEEECCCC-----CGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HCCCceEEEECCCC-----CCcCCccHHHHHHHHHHhCCCeEc
Confidence 689999975533 111245678888899999999874
No 42
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=76.56 E-value=2.6 Score=45.46 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHCCCeeEEEEeCCCCCch--hHHHHHHHHhCCCCEEEE
Q 016064 226 RVVMEVLKMAAQNKKLFRVLCTEGRPDRS--GLRLANELAKLDVPVKLL 272 (396)
Q Consensus 226 ~~V~~~L~~A~~~gk~f~ViV~EsrP~~e--G~~la~~L~~~GI~vtlI 272 (396)
+-+...|.+|+++|+..+|+|--.....+ ....++.|.++|+.|.+-
T Consensus 384 s~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~g 432 (705)
T 2o8r_A 384 SSIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIVYS 432 (705)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEEEc
Confidence 45777777888889998888764443433 577899999999988774
No 43
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=75.88 E-value=15 Score=34.78 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=56.9
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch-------HHHHhcc-cCC
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS-------AVAYTMD-EVD 285 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds-------av~~~m~-~vd 285 (396)
....+++|-|.+..+..++....+.|. +|++.+ |.+.|.. ..+...|.++..++-. -+..+-+ +..
T Consensus 90 ~~~~v~~t~g~~~al~~~~~~l~~~gd--~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 163 (391)
T 3h14_A 90 DPGRVVITPGSSGGFLLAFTALFDSGD--RVGIGA--PGYPSYR--QILRALGLVPVDLPTAPENRLQPVPADFAGLDLA 163 (391)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTTC--EEEEEE--SCCHHHH--HHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCS
T ss_pred CHHHEEEecChHHHHHHHHHHhcCCCC--EEEEcC--CCCccHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCe
Confidence 445677777777766666655543343 555443 5565544 3455678888777532 1222222 345
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++. ..--+.|.+...--=..++-+|+++++++++
T Consensus 164 ~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 164 GLMVA-SPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 55443 1112234444433345677789999998876
No 44
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=75.52 E-value=53 Score=30.68 Aligned_cols=101 Identities=10% Similarity=0.042 Sum_probs=53.1
Q ss_pred CceEEeecChHHHHHHHHHHHH--CCCeeEEEEeCCCCCchhHH-HH-HHHHhCCCCEEEEcc--------hHHHHhcc-
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ--NKKLFRVLCTEGRPDRSGLR-LA-NELAKLDVPVKLLID--------SAVAYTMD- 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~--~gk~f~ViV~EsrP~~eG~~-la-~~L~~~GI~vtlI~D--------sav~~~m~- 282 (396)
..+++|.|.+..+..+++.+.+ -++.-+|++.+ |.+.|.. .. ......|.++..++. ..+-..+.
T Consensus 86 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~ 163 (406)
T 1kmj_A 86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ--MEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE 163 (406)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEET--TCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT
T ss_pred CeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEec--ccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc
Confidence 4577777766666666655521 12234666654 4444432 12 223345887777652 23444443
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...-...|.+.. -..++-+|+++++++++
T Consensus 164 ~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 164 KTRLLAI-THVSNVLGTENP---LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp TEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCeEEEE-eCCCccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3333333 211122354444 45677889999988776
No 45
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=75.21 E-value=51 Score=30.50 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=55.8
Q ss_pred CceEEeecChHHHHHHHHHHH----HCCCeeEEEEeCCCCCchhH-HHHHHHHhCCCCEEEEcc--------hHHHHhcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAA----QNKKLFRVLCTEGRPDRSGL-RLANELAKLDVPVKLLID--------SAVAYTMD 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~----~~gk~f~ViV~EsrP~~eG~-~la~~L~~~GI~vtlI~D--------sav~~~m~ 282 (396)
..+++|-|.+..+..++..+. +.|. +|++. .|.+.|. ..+..+...|.++..++- ..+-..+.
T Consensus 62 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd--~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 137 (384)
T 1eg5_A 62 SEIFFTSCATESINWILKTVAETFEKRKR--TIITT--PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD 137 (384)
T ss_dssp GGEEEESCHHHHHHHHHHHHHHHTTTTCC--EEEEC--TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC
T ss_pred CeEEEECCHHHHHHHHHHhhhhhccCCCC--EEEEC--CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC
Confidence 467777766666666666554 2343 55554 3555554 335556778988877652 23333333
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCC--CcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMN--KPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~--vPvyV 322 (396)
+...|++ ...-...|.+.. -..++-+|++++ +++++
T Consensus 138 ~~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 138 EDTFLVSI-MAANNEVGTIQP---VEDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp TTEEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEE
T ss_pred CCCeEEEE-ECCCCCcccccC---HHHHHHHHHhcCCceEEEE
Confidence 3334443 222223355555 266778889998 76655
No 46
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=75.20 E-value=24 Score=28.14 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=24.9
Q ss_pred cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEe
Q 016064 283 EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ 323 (396)
++|++++|+.+ + ++-. -.|+..-.+ .++.++||+|+
T Consensus 106 ~~dliV~G~~~---~-~~~~~~~Gs~~~~v-~~~~~~pVlvv 142 (143)
T 3fdx_A 106 PADLVIIASHR---P-DITTYLLGSNAAAV-VRHAECSVLVV 142 (143)
T ss_dssp TCSEEEEESSC---T-TCCSCSSCHHHHHH-HHHCSSEEEEE
T ss_pred CCCEEEEeCCC---C-CCeeeeeccHHHHH-HHhCCCCEEEe
Confidence 79999999974 2 3332 257655444 56678999986
No 47
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=74.37 E-value=41 Score=28.89 Aligned_cols=35 Identities=9% Similarity=-0.033 Sum_probs=26.9
Q ss_pred HHHHHHHHhCCCCEEEEcchHHHHhccc---CCEEEEc
Q 016064 256 LRLANELAKLDVPVKLLIDSAVAYTMDE---VDMVFVG 290 (396)
Q Consensus 256 ~~la~~L~~~GI~vtlI~Dsav~~~m~~---vd~VlvG 290 (396)
.++++.+++.|+++..|++..-+.+.+. +|.+|.-
T Consensus 126 i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 126 VKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEe
Confidence 4668888999999999998765555555 8987764
No 48
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=74.30 E-value=8.6 Score=35.06 Aligned_cols=43 Identities=19% Similarity=0.232 Sum_probs=28.1
Q ss_pred cCCEEEEcceeEeecCCeeccc--c--HHHHHHHhhhCCCcEEEecccccccc
Q 016064 283 EVDMVFVGADGVVESGGIINMM--G--TYQIALVAHSMNKPVYVAAESYKFAR 331 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nki--G--T~~lAl~Ak~~~vPvyV~aes~Kf~~ 331 (396)
++|..|+-|...-++|.+.-.. + +..+|.+|| .|+++.-+..+
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~~~~~~~~~~~a~aA~------~VIveVn~~vp 194 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQLSARNFNPLIALAAD------ITLVEPDELVE 194 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECCHHHHTTHHHHHHHEE------EEEEEEEEEEC
T ss_pred CCcEEEEEeecCCCCceEEEecCCccccHHHHHhcC------EEEEEEccccC
Confidence 6899999999999999876652 2 223455555 45555444433
No 49
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=74.20 E-value=3.8 Score=39.12 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=70.7
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+-|.++.+.....+...+.+|.+.|.+.-|+++++-|..+-.++.+..++.|+ .++-.++++.+-+...+.......+
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~ 147 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV--KIIGPNTPGIASPKVGKLGIIPMEV 147 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEECSSCCEEEETTTEEEECCCGGG
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCceeeccCcceeeecccCC
Confidence 35788888899999999999999887766666777666555667777777776 4554555554444333322222223
Q ss_pred eecC--CeeccccHHHHHHH--hhhCCCcEE
Q 016064 295 VESG--GIINMMGTYQIALV--AHSMNKPVY 321 (396)
Q Consensus 295 ~~NG--~v~nkiGT~~lAl~--Ak~~~vPvy 321 (396)
..-| +++++.|+...+++ +...++.|-
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 178 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVS 178 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeE
Confidence 3334 68999999988774 566777774
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=74.16 E-value=14 Score=31.30 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=61.7
Q ss_pred ccCceEEeecChH-------HHHHHHHHHH--HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE----EcchHHHHh
Q 016064 214 FDGCTILVHGFSR-------VVMEVLKMAA--QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL----LIDSAVAYT 280 (396)
Q Consensus 214 ~dg~~ILT~~~S~-------~V~~~L~~A~--~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl----I~Dsav~~~ 280 (396)
.++.+|+..|+-. .+...+.... +++..++++++-..+...-..+.+.+.+.| .|++ ++...+..+
T Consensus 34 ~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~ 112 (200)
T 2bfw_A 34 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 112 (200)
T ss_dssp CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHH
Confidence 4556888877644 2444454444 445678888776544112344555566667 7877 344578899
Q ss_pred cccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 281 MDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 281 m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
|..+|.+++.... .| .| ...+=|-.+|+||++.
T Consensus 113 ~~~ad~~l~ps~~---e~-----~~--~~~~Ea~a~G~PvI~~ 145 (200)
T 2bfw_A 113 YGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 145 (200)
T ss_dssp HTTCSEEEECCSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHCCEEEECCCC---CC-----cc--HHHHHHHHCCCCEEEe
Confidence 9999999986532 12 23 2345566789998774
No 51
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=73.33 E-value=12 Score=35.20 Aligned_cols=109 Identities=17% Similarity=0.053 Sum_probs=63.8
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-------CCCCEEEE--cc-hHHHHhccc
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAK-------LDVPVKLL--ID-SAVAYTMDE 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-------~GI~vtlI--~D-sav~~~m~~ 283 (396)
.+.+||..|-|+-+-..|. .+.++| .+|+++..++..... ....+.. .++.+... .| .++..++.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQY-NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHH-HHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCchh-hhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 4678999998887765444 344445 577776655443222 2333433 34443322 12 345666777
Q ss_pred CCEEEEcceeEeecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 284 VDMVFVGADGVVESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 284 vd~VlvGAd~V~~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
+|.||--|-....+. --.|-.||..+.-+|+..+++-+|.+.+
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 777776553211000 1356789999999999999866665544
No 52
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=71.96 E-value=15 Score=33.88 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=66.5
Q ss_pred HHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCC------------------chhHHHHHHHHhC--C
Q 016064 207 MLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPD------------------RSGLRLANELAKL--D 266 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~------------------~eG~~la~~L~~~--G 266 (396)
..+.+.+. +.+|+..|-++.-..+++.+.+.|.. ++.+++.... ..-..+++.|.+. +
T Consensus 23 ~~~q~~l~-~~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 100 (249)
T 1jw9_B 23 FDGQEALK-DSRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH 100 (249)
T ss_dssp HHHHHHHH-HCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred HHHHHHHh-CCeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence 33344444 35888899888766666666666742 4444454431 1234456777664 4
Q ss_pred CCEEEEc----chHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 267 VPVKLLI----DSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 267 I~vtlI~----Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
+.++.+. +..+..+++++|.||.+.|..- --+.+.-.|+..++|++.++
T Consensus 101 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 101 IAITPVNALLDDAELAALIAEHDLVLDCTDNVA---------VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp SEEEEECSCCCHHHHHHHHHTSSEEEECCSSHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred cEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEee
Confidence 5665543 3344556789999998876532 23667788888999998764
No 53
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=71.81 E-value=21 Score=33.95 Aligned_cols=100 Identities=17% Similarity=0.218 Sum_probs=50.6
Q ss_pred CceEEeecChHHHHHHHHHHH------HCCCeeEEEEeCCCCCchhHHH-HHHHHh---CCCCEEEEc-chHHHHhcc-c
Q 016064 216 GCTILVHGFSRVVMEVLKMAA------QNKKLFRVLCTEGRPDRSGLRL-ANELAK---LDVPVKLLI-DSAVAYTMD-E 283 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~------~~gk~f~ViV~EsrP~~eG~~l-a~~L~~---~GI~vtlI~-Dsav~~~m~-~ 283 (396)
..+++|-|.+..+..+++.+. +.|. +|+++. .+.+.+... ...+.+ .|.++..++ ...+-..+. +
T Consensus 89 ~~v~~~~g~t~al~~al~~~~~~~~~~~~gd--~vii~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~ 165 (416)
T 1qz9_A 89 GEVVVTDTTSINLFKVLSAALRVQATRSPER--RVIVTE-TSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQD 165 (416)
T ss_dssp TSEEECSCHHHHHHHHHHHHHHHHHHHSTTC--CEEEEE-TTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTT
T ss_pred ccEEEeCChhHHHHHHHHhhcccccccCCCC--cEEEEc-CCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCC
Confidence 456777555545544555443 3344 344443 233333222 223333 288888886 334444443 3
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++ ...-...|.+.. -..++-+|+++++++++
T Consensus 166 ~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 166 TAVVML-THVNYKTGYMHD---MQALTALSHECGALAIW 200 (416)
T ss_dssp EEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-eccccCcccccC---HHHHHHHHHHcCCEEEE
Confidence 333332 222122344443 36678889999998876
No 54
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=70.84 E-value=4.6 Score=38.42 Aligned_cols=105 Identities=19% Similarity=0.153 Sum_probs=71.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+-|+++.+.....+...+.++.+.|.+.-|+++++-|..+-.++.+...+.|+ .++-.++++.+-+...+.......+
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi--~vigPNc~Gii~~~~~~~~~~~~~~ 141 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS--RLIGGNCPGIISAEETKIGIMPGHV 141 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEEESSSCEEEETTTEEEESSCGGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEeCCCCeEEcCCCceeEEcccCC
Confidence 45788888899999999999999887766667777665554566666777776 4665555555544433332222223
Q ss_pred eecC--CeeccccHHHHHHH--hhhCCCcEE
Q 016064 295 VESG--GIINMMGTYQIALV--AHSMNKPVY 321 (396)
Q Consensus 295 ~~NG--~v~nkiGT~~lAl~--Ak~~~vPvy 321 (396)
..-| +++++.||...+++ +...++.|-
T Consensus 142 ~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 1oi7_A 142 FKRGRVGIISRSGTLTYEAAAALSQAGLGTT 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3334 68999999988776 566777774
No 55
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=70.74 E-value=43 Score=28.33 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=29.6
Q ss_pred chhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 253 RSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 253 ~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
.+-.+.++.+.+.|+++..|++..-+ +.+.+|.++.-.
T Consensus 96 ~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~ 133 (180)
T 1jeo_A 96 ESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPLE 133 (180)
T ss_dssp HHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeC
Confidence 33456688899999999999997666 778899887643
No 56
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=70.21 E-value=19 Score=33.66 Aligned_cols=101 Identities=9% Similarity=0.104 Sum_probs=56.6
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----------c-hHHHHhc-c
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----------D-SAVAYTM-D 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----------D-sav~~~m-~ 282 (396)
...+++|-|.+..+..+++.+.+.|. +|++.+ |.+.|.. ..+...|.++..++ | ..+...+ +
T Consensus 82 ~~~v~~~~g~~~a~~~~~~~l~~~gd--~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 155 (383)
T 3kax_A 82 KEWIVFSAGIVPALSTSIQAFTKENE--SVLVQP--PIYPPFF--EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ 155 (383)
T ss_dssp GGGEEEESCHHHHHHHHHHHHCCTTC--EEEECS--SCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhCCCCC--EEEEcC--CCcHHHH--HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc
Confidence 44677777766666666665543343 555443 6665654 33455677666554 2 2333333 4
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+...|++ ...--..|.+...---..++-+|+++++++++
T Consensus 156 ~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 156 GVKLMLL-CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp TCCEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEE
Confidence 5666665 22222334444433344566669999998887
No 57
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=70.16 E-value=29 Score=30.42 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=29.7
Q ss_pred hhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 254 SGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
+-.++++.+.+.|+++..|++..-+.+.+.+|.+|.-
T Consensus 104 ~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~ 140 (200)
T 1vim_A 104 SVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVV 140 (200)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEE
Confidence 3456688889999999999997766677789988863
No 58
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.05 E-value=22 Score=28.75 Aligned_cols=90 Identities=11% Similarity=0.093 Sum_probs=52.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-----cccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-----MDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-----m~~vd~VlvG 290 (396)
+..|+..|.+..=..+.+.+.++| ++|++.|..|. -+..+.+.|+++... |..-... +.++|.|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~-----~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKE-----KIELLEDEGFDAVIA-DPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEEEC-CTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHH-----HHHHHHHCCCcEEEC-CCCCHHHHHhCCcccCCEEEEe
Confidence 457888888765444555555555 46777776542 345666778765442 3222222 3567777765
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.. +......++..|++.+.+.++
T Consensus 78 ~~---------~~~~n~~~~~~a~~~~~~~ii 100 (141)
T 3llv_A 78 GS---------DDEFNLKILKALRSVSDVYAI 100 (141)
T ss_dssp CS---------CHHHHHHHHHHHHHHCCCCEE
T ss_pred cC---------CHHHHHHHHHHHHHhCCceEE
Confidence 53 234456778888887644433
No 59
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=70.02 E-value=37 Score=28.91 Aligned_cols=38 Identities=29% Similarity=0.266 Sum_probs=30.0
Q ss_pred hhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 254 SGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
+-.++++.+.+.|+++..|++..-+.+-+.+|.++.-.
T Consensus 102 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 102 DTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEec
Confidence 34566888999999999999976666667889888743
No 60
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=69.93 E-value=11 Score=36.00 Aligned_cols=111 Identities=15% Similarity=0.121 Sum_probs=64.9
Q ss_pred cCceEEeecChHHHHHHHH-HHHHC-CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----hHHHHhcccCCEEE
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQN-KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----SAVAYTMDEVDMVF 288 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~-gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----sav~~~m~~vd~Vl 288 (396)
.|.+||..|.++.+-.-|. .+.++ |- .+|+++...+ .....+...|...++.+. ..| ..+..++.++|.||
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~-~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDE-LKQSEMAMEFNDPRMRFF-IGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCH-HHHHHHHHHHCCTTEEEE-ECCTTCHHHHHHHTTTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECCh-hhHHHHHHHhcCCCEEEE-ECCCCCHHHHHHHHhcCCEEE
Confidence 4678888898877655443 34444 42 3666664432 223344555544444332 223 45667778888777
Q ss_pred EcceeEee--------cCCeeccccHHHHHHHhhhCCCcEEEeccccc
Q 016064 289 VGADGVVE--------SGGIINMMGTYQIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 289 vGAd~V~~--------NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~K 328 (396)
--|-.... .---.|-.||..++-+|+..+++-+|...+.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~ 144 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK 144 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc
Confidence 65521110 00013668999999999999988777766644
No 61
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.81 E-value=5.1 Score=36.94 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=55.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
.|..||..|.+.+...-++...+.|-.+.|+ ...... . .+.|.+.| .++++...--...+..+|+||...+.=
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVv--ap~~~~---~-l~~l~~~~-~i~~i~~~~~~~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVV--APTVSA---E-INEWEAKG-QLRVKRKKVGEEDLLNVFFIVVATNDQ 102 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEE--CSSCCH---H-HHHHHHTT-SCEEECSCCCGGGSSSCSEEEECCCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCCH---H-HHHHHHcC-CcEEEECCCCHhHhCCCCEEEECCCCH
Confidence 5789999999998888777777778655555 333222 2 34444444 334543321122356778777554321
Q ss_pred eecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 295 VESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 295 ~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
-+ ...++..|+ .++||-|+-
T Consensus 103 -----~~----N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 103 -----AV----NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp -----HH----HHHHHHHSC-TTCEEEC--
T ss_pred -----HH----HHHHHHHHh-CCCEEEEeC
Confidence 12 245777788 999987754
No 62
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=69.72 E-value=38 Score=31.51 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=56.5
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhc---ccCCE
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTM---DEVDM 286 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m---~~vd~ 286 (396)
+++|.|.+..+..++..+.+.| -+|++. .|.+.|..+...+...|.++..++- ..+-..+ +++..
T Consensus 74 v~~~~g~t~a~~~~~~~l~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~ 149 (386)
T 2dr1_A 74 LLVPSSGTGIMEASIRNGVSKG--GKVLVT--IIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEA 149 (386)
T ss_dssp EEESSCHHHHHHHHHHHHSCTT--CEEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCE
T ss_pred EEEeCChHHHHHHHHHHhhcCC--CeEEEE--cCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcE
Confidence 5566666666666665544334 356655 3566665455566678888776652 2333344 34555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++- ..-...|.+. . --.++-+|+++++++++
T Consensus 150 v~~~-~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 150 VTIT-YNETSTGVLN-P--LPELAKVAKEHDKLVFV 181 (386)
T ss_dssp EEEE-SEETTTTEEC-C--HHHHHHHHHHTTCEEEE
T ss_pred EEEE-eecCCcchhC-C--HHHHHHHHHHcCCeEEE
Confidence 5554 2222334443 3 36778889999998876
No 63
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=69.39 E-value=15 Score=34.01 Aligned_cols=102 Identities=11% Similarity=0.093 Sum_probs=57.7
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch-------HHHHhccc----
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS-------AVAYTMDE---- 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds-------av~~~m~~---- 283 (396)
...+++|.|.+..+..+++.+.+.| -+|++. .|.+.+...+..+...|+++..++.. .+-..+.+
T Consensus 66 ~~~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 141 (359)
T 1svv_A 66 DADVHFISGGTQTNLIACSLALRPW--EAVIAT--QLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE 141 (359)
T ss_dssp TSEEEEESCHHHHHHHHHHHHCCTT--EEEEEE--TTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST
T ss_pred CccEEEeCCchHHHHHHHHHHhCCC--CEEEEc--ccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc
Confidence 3457777777777777776664333 356654 35554443322356679988888632 33333432
Q ss_pred ----CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 ----VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 ----vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++-. ....|.+...-=-..++-+|+++++.+++
T Consensus 142 ~~~~~~~v~~~~--~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 142 HMVIPKLVYISN--TTEVGTQYTKQELEDISASCKEHGLYLFL 182 (359)
T ss_dssp TSCEEEEEEEES--SCTTSCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCceEEEEEc--CCCCceecCHHHHHHHHHHHHHhCCEEEE
Confidence 44555532 23335554431123467788999998876
No 64
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=69.09 E-value=28 Score=29.68 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=29.3
Q ss_pred chhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 253 RSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 253 ~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
.+-.++++.+.+.|+++..|++..-+.+-+.+|.+|.-
T Consensus 93 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 93 KSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRM 130 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEe
Confidence 33456688899999999999997656666778987753
No 65
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=69.05 E-value=24 Score=33.05 Aligned_cols=98 Identities=12% Similarity=0.040 Sum_probs=56.5
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c-hHHHHhcc-cCCEEEEc
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D-SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D-sav~~~m~-~vd~VlvG 290 (396)
....+++|.|.+..+..+++.+.+.| -+|++.+ |.+.|... .+...|.++..++ | ..+-..+. ++..|++
T Consensus 88 ~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~~--~~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~- 160 (370)
T 2z61_A 88 IPDNIIITGGSSLGLFFALSSIIDDG--DEVLIQN--PCYPCYKN--FIRFLGAKPVFCDFTVESLEEALSDKTKAIII- 160 (370)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTT--CEEEEES--SCCTHHHH--HHHHTTCEEEEECSSHHHHHHHCCSSEEEEEE-
T ss_pred ChhhEEECCChHHHHHHHHHHhcCCC--CEEEEeC--CCchhHHH--HHHHcCCEEEEeCCCHHHHHHhcccCceEEEE-
Confidence 33467777777777766666554334 3566553 55555443 3455788887775 3 23333443 3444544
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..---..|.+...- ++-+|+++++++++
T Consensus 161 ~~p~nptG~~~~~~----l~~~~~~~~~~li~ 188 (370)
T 2z61_A 161 NSPSNPLGEVIDRE----IYEFAYENIPYIIS 188 (370)
T ss_dssp ESSCTTTCCCCCHH----HHHHHHHHCSEEEE
T ss_pred cCCCCCcCcccCHH----HHHHHHHcCCEEEE
Confidence 22112346555554 88888999988776
No 66
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=68.69 E-value=14 Score=34.00 Aligned_cols=103 Identities=9% Similarity=0.075 Sum_probs=59.5
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCc---hhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEE
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDR---SGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVF 288 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~---eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~Vl 288 (396)
..+||..|-++.+-..+ +.+.++| ++|+++...+.. +..+..+.|...|+.+... .| .++..++..+|.||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 35688888776554433 3334445 566665443321 2222334566667654321 22 45666777777776
Q ss_pred EcceeEeecCCeeccccHHHHHHHhhhCC-CcEEEe
Q 016064 289 VGADGVVESGGIINMMGTYQIALVAHSMN-KPVYVA 323 (396)
Q Consensus 289 vGAd~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~ 323 (396)
.-|-.... + .|-.|+..++-+|+..+ ++-+|.
T Consensus 82 ~~a~~~~~-~--~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 82 SALAGGVL-S--HHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp ECCCCSSS-S--TTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred ECCccccc-h--hhHHHHHHHHHHHHhcCCCceEEe
Confidence 54422111 1 26779999999999998 887774
No 67
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=68.11 E-value=4.8 Score=38.45 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=69.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEe
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVV 295 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~ 295 (396)
-|.++.+.....+...+.+|.+.|.+.-|+++++-|..+-.++.+...+.|+ .++-.++++.+-+...+.-.....+.
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~~ 149 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGA--TIIGPNCPGAITPGQAKVGIMPGHIF 149 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTC--EEECSSSCEEEETTTEEEESCCGGGC
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCCeeEcccccceeecccCCC
Confidence 4788888889999999999999887766666777666555677777777776 45655555544443333222222233
Q ss_pred ecC--CeeccccHHHHHHH--hhhCCCcEE
Q 016064 296 ESG--GIINMMGTYQIALV--AHSMNKPVY 321 (396)
Q Consensus 296 ~NG--~v~nkiGT~~lAl~--Ak~~~vPvy 321 (396)
.-| +++++.|+...+++ +...++.|-
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 179 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQS 179 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCee
Confidence 334 68999999987775 455777774
No 68
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=68.07 E-value=24 Score=30.01 Aligned_cols=86 Identities=15% Similarity=0.050 Sum_probs=50.6
Q ss_pred CceEEeecChHHHHHHHHHHHHC-CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--chH-HHHh--cccCCEEEE
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN-KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--DSA-VAYT--MDEVDMVFV 289 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~-gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--Dsa-v~~~--m~~vd~Vlv 289 (396)
++.|+.+|....=..+.+.+.+. | ++|++.|..|. -+..+.+.|+.+.... |.. +..+ +.++|.|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 56788889877655555555555 5 46777776552 2455777898765432 212 2223 566777776
Q ss_pred cceeEeecCCeeccccHHHHHHHhhhCC
Q 016064 290 GADGVVESGGIINMMGTYQIALVAHSMN 317 (396)
Q Consensus 290 GAd~V~~NG~v~nkiGT~~lAl~Ak~~~ 317 (396)
.... ......++..++..+
T Consensus 112 ~~~~---------~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMPH---------HQGNQTALEQLQRRN 130 (183)
T ss_dssp CCSS---------HHHHHHHHHHHHHTT
T ss_pred eCCC---------hHHHHHHHHHHHHHC
Confidence 5431 223445566777766
No 69
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=67.94 E-value=13 Score=35.23 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=61.1
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEccee
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~ 293 (396)
..|++|..+|+-..+.+.+. +.++|+|+|-.|.. |. .++.+.-++++++|.|++-.-+
T Consensus 139 ~~g~kV~vIG~~P~i~~~l~------~~~~v~V~d~~p~~------------g~----~p~~~~e~ll~~aD~viiTGsT 196 (270)
T 2h1q_A 139 VKGKKVGVVGHFPHLESLLE------PICDLSILEWSPEE------------GD----YPLPASEFILPECDYVYITCAS 196 (270)
T ss_dssp TTTSEEEEESCCTTHHHHHT------TTSEEEEEESSCCT------------TC----EEGGGHHHHGGGCSEEEEETHH
T ss_pred cCCCEEEEECCCHHHHHHHh------CCCCEEEEECCCCC------------CC----CChHHHHHHhhcCCEEEEEeee
Confidence 45789999999876655442 24688888988872 32 4888888999999999986544
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEeccccccccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
++|+.=-..+.+ |+ ..++++++.+|.-+.+.
T Consensus 197 ------lvN~Ti~~lL~~-~~-~a~~vvl~GPS~p~~P~ 227 (270)
T 2h1q_A 197 ------VVDKTLPRLLEL-SR-NARRITLVGPGTPLAPV 227 (270)
T ss_dssp ------HHHTCHHHHHHH-TT-TSSEEEEESTTCCCCGG
T ss_pred ------eecCCHHHHHHh-Cc-cCCeEEEEecChhhhHH
Confidence 333322223332 33 46699999998776664
No 70
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=67.86 E-value=53 Score=30.57 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHH-HHH-HHhCCCCEEEEcch-
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRL-ANE-LAKLDVPVKLLIDS- 275 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~l-a~~-L~~~GI~vtlI~Ds- 275 (396)
..++.|+++.- ...+.+++|.|.+..+..++..+ .+.| -+|++. .|.+.|... ... ....|.++..++..
T Consensus 63 ~l~~~la~~~g--~~~~~v~~~~g~t~a~~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 136 (390)
T 1elu_A 63 QLRQALAETFN--VDPNTITITDNVTTGCDIVLWGLDWHQG--DEILLT--DCEHPGIIAIVQAIAARFGITYRFFPVAA 136 (390)
T ss_dssp HHHHHHHHHTT--SCGGGEEEESSHHHHHHHHHHHSCCCTT--CEEEEE--TTCCHHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred HHHHHHHHHcC--CCHHHEEEeCChHHHHHHHHhCCCCCCC--CEEEEe--cCcccHHHHHHHHHHHHhCcEEEEEcCCC
Confidence 34455554321 22335777777777766666554 3334 356654 456666543 222 34458888777632
Q ss_pred ---------HHHHhcc-cCCEEEEcceeEeecCCeeccccHHHHHHHhh----hCCCcEEE
Q 016064 276 ---------AVAYTMD-EVDMVFVGADGVVESGGIINMMGTYQIALVAH----SMNKPVYV 322 (396)
Q Consensus 276 ---------av~~~m~-~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak----~~~vPvyV 322 (396)
.+-..+. ++..|++ ...-...|.+.. --.++-+|+ ++++.+++
T Consensus 137 ~~~~~~d~~~l~~~i~~~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 137 TLNQGDAAAVLANHLGPKTRLVIL-SHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp GSSSSCHHHHHHTTCCTTEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEE
T ss_pred CCCccchHHHHHHhcCCCceEEEE-eccccCCceecC---HHHHHHHHhhhhhhcCcEEEE
Confidence 2222232 3333433 222222355544 456777888 88887766
No 71
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=67.71 E-value=20 Score=34.65 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=56.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHH-HHHHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLA-NELAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la-~~L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.++|-|.+..+..+|+.+.+.|. +|++. .|.+.|. .+. ..+...|+++++++- ..+...+. ++..|++
T Consensus 83 ~~~~~~sGt~A~~~al~~~~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 157 (392)
T 3qhx_A 83 FGRAFSSGMAAADCALRAMLRPGD--HVVIP--DDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWV- 157 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEEE--TTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEEe--CCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEE-
Confidence 567776666666666665544343 56554 3455443 333 344678999999873 33444453 3444443
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+..-++.+.. -..++-+|++++++++|
T Consensus 158 -~~~~nptG~~~~--l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 158 -ETPTNPLLSIAD--IAGIAQLGADSSAKVLV 186 (392)
T ss_dssp -ESSCTTTCCCCC--HHHHHHHHHHHTCEEEE
T ss_pred -ECCCCCCcEEec--HHHHHHHHHHcCCEEEE
Confidence 233222223322 45688889999998887
No 72
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=67.55 E-value=25 Score=32.90 Aligned_cols=102 Identities=10% Similarity=0.038 Sum_probs=56.9
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc------hHHHHhcc-cCCE
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID------SAVAYTMD-EVDM 286 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D------sav~~~m~-~vd~ 286 (396)
....+++|-|.+..+..+++.+.+.|. +|++.+ |.+.|... .+...|.++..++- ..+-..+. +...
T Consensus 80 ~~~~i~~t~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~ 153 (377)
T 3fdb_A 80 RPEWIFPIPDVVRGLYIAIDHFTPAQS--KVIVPT--PAYPPFFH--LLSATQREGIFIDATGGINLHDVEKGFQAGARS 153 (377)
T ss_dssp CGGGEEEESCHHHHHHHHHHHHSCTTC--CEEEEE--SCCTHHHH--HHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCE
T ss_pred CHHHEEEeCChHHHHHHHHHHhcCCCC--EEEEcC--CCcHhHHH--HHHHcCCEEEEccCCCCCCHHHHHHHhccCCCE
Confidence 345677777766666666655543343 455543 55555443 34456888888752 33444443 4444
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++.. .--..|.+...--=..++-+|+++++++++
T Consensus 154 v~i~~-p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 154 ILLCN-PYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp EEEES-SBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44432 122234444433344566678999998887
No 73
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=67.38 E-value=34 Score=27.23 Aligned_cols=59 Identities=15% Similarity=0.200 Sum_probs=34.8
Q ss_pred HHHhCCCCE--EEEcchHH----HHhc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 261 ELAKLDVPV--KLLIDSAV----AYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 261 ~L~~~GI~v--tlI~Dsav----~~~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
.+.+.|+++ +.+..... ..+. .++|++++|+. . |+ ..+.|+.. .-+.++.++||+|+-+
T Consensus 72 ~~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~---~-~~-~~~lgs~~-~~vl~~~~~pVlvv~~ 138 (141)
T 1jmv_A 72 LAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH---Q-DF-WSKLMSST-RQVMNTIKIDMLVVPL 138 (141)
T ss_dssp HHHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC---C-CC-HHHHHHHH-HHHHTTCCSEEEEEEC
T ss_pred HHHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC---C-ch-hhhhcchH-HHHHhcCCCCEEEeeC
Confidence 344568875 23332222 2222 35999999987 2 23 34467544 3455677899999753
No 74
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=66.64 E-value=26 Score=32.39 Aligned_cols=44 Identities=18% Similarity=0.085 Sum_probs=30.3
Q ss_pred cCCEEEEcceeEeecCCeecc--cc--HHHHHHHhhhCCCcEEEeccccccccc
Q 016064 283 EVDMVFVGADGVVESGGIINM--MG--TYQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nk--iG--T~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
++|..|+-|...-.+|.+.-. .+ ...+|.+|| .|+++.-+..+.
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk------~VIveVn~~vp~ 198 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK------ITIAEAEEIVEA 198 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE------EEEEEEEEEECT
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC------EEEEEEeCCCCc
Confidence 689999999999999997664 22 345566666 555555555443
No 75
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=66.14 E-value=33 Score=29.09 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=30.8
Q ss_pred chhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 253 RSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 253 ~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
.+-.++++.+.+.|+++..|++..-+.+.+.+|.++.-.
T Consensus 110 ~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 110 SEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 344566888999999999999977667777899887644
No 76
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=66.05 E-value=48 Score=26.28 Aligned_cols=37 Identities=22% Similarity=0.512 Sum_probs=24.8
Q ss_pred cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEe
Q 016064 283 EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ 323 (396)
++|++++|+..- |++-. -.|+..-.++ ++.++||+|+
T Consensus 99 ~~dliV~G~~~~---~~~~~~~~Gs~~~~vl-~~~~~pVlvv 136 (137)
T 2z08_A 99 KADLIVMGTRGL---GALGSLFLGSQSQRVV-AEAPCPVLLV 136 (137)
T ss_dssp TCSEEEEESSCT---TCCSCSSSCHHHHHHH-HHCSSCEEEE
T ss_pred CCCEEEECCCCC---chhhhhhhccHHHHHH-hcCCCCEEEe
Confidence 899999999852 22221 2576555554 5568999986
No 77
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=65.73 E-value=29 Score=32.35 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=58.9
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCEE
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDMV 287 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~V 287 (396)
+++|.|.+..+..+++.+.+.| -+|++.+ |..-|..+...+...|.++..++. ..+-..+. ++..|
T Consensus 77 v~~~~gg~~al~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v 152 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFNLLEPG--DSFLTGT--NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLL 152 (393)
T ss_dssp EEESCCTTTHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEEeCCcHHHHHHHHHhcCCCC--CEEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEE
Confidence 6777777877777776664334 3566653 444455566667778988877751 23333443 56666
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++-. .=...|.+.. --.++-+|+++++++++
T Consensus 153 ~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 153 FLVH-GESSTGVVQP---LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp EEES-EETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEec-cCCcchhhcc---HHHHHHHHHHcCCEEEE
Confidence 5542 2222344433 23577889999998877
No 78
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=65.60 E-value=5.6 Score=37.75 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=69.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+-|.++.+.....+...+.+|.+.|.+.-|+++++-+..+-.++.+...+.|+. ++-.+.++.+-+...+...-+..+
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~--liGPNc~Gi~~p~~~~~~~~~~~~ 141 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR--MIGPNTPGVITPGECKIGIQPGHI 141 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSCCEEEETTTEEEESSCTTS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEecCCcceecCCcceeEecccCC
Confidence 357888888889999999999998987767778877776666777777788873 454455444433322221111122
Q ss_pred eecC--CeeccccHHHHHHH--hhhCCCcEE
Q 016064 295 VESG--GIINMMGTYQIALV--AHSMNKPVY 321 (396)
Q Consensus 295 ~~NG--~v~nkiGT~~lAl~--Ak~~~vPvy 321 (396)
..-| +++++.||...+++ +...++.|-
T Consensus 142 ~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 2nu8_A 142 HKPGKVGIVSRSGTLTYEAVKQTTDYGFGQS 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCEE
Confidence 3334 57888999766665 456777764
No 79
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=65.20 E-value=85 Score=29.48 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=54.8
Q ss_pred eEEeecCh-HHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCE
Q 016064 218 TILVHGFS-RVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDM 286 (396)
Q Consensus 218 ~ILT~~~S-~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~ 286 (396)
++++.+.+ ..+..++..+.+.| -+|++.+ |.+.|..+...+...|+++..++. ..+-..+. +...
T Consensus 64 ~~~~~~s~t~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 139 (416)
T 3isl_A 64 AYPIDGTSRAGIEAVLASVIEPE--DDVLIPI--YGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKI 139 (416)
T ss_dssp EEEEESCHHHHHHHHHHHHCCTT--CEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEecCcHHHHHHHHHHHhcCCC--CEEEEec--CCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcE
Confidence 34233443 44554554443323 3666654 555565566677788998888762 23334443 5555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++- ..=...|.+.. --.++-+|+++++++++
T Consensus 140 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 171 (416)
T 3isl_A 140 VAMV-HGETSTGRIHP---LKAIGEACRTEDALFIV 171 (416)
T ss_dssp EEEE-SEETTTTEECC---CHHHHHHHHHTTCEEEE
T ss_pred EEEE-ccCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 5444 22223444433 35688889999998887
No 80
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=64.76 E-value=22 Score=29.79 Aligned_cols=48 Identities=21% Similarity=0.306 Sum_probs=27.3
Q ss_pred cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEeccccccccccc
Q 016064 283 EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAESYKFARLYP 334 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~p 334 (396)
++|+|++|+.+- |++-. -.|+..-.+ .++.++||+|+-+..+-.+..|
T Consensus 124 ~~DLIVmG~~g~---~~~~~~~~Gsva~~v-l~~a~~pVlvv~~~~~~~~~~p 172 (175)
T 2gm3_A 124 RPDFLVVGSRGL---GRFQKVFVGTVSAFC-VKHAECPVMTIKRNADETPSDP 172 (175)
T ss_dssp CCSEEEEEECCC---C--------CHHHHH-HHHCSSCEEEEECCGGGSCSST
T ss_pred CCCEEEEeCCCC---ChhhhhhcCchHHHH-HhCCCCCEEEEcCCcCCCCCCC
Confidence 799999998752 22222 256655444 4556799999876554443333
No 81
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=64.59 E-value=89 Score=28.86 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=52.2
Q ss_pred CceEEeecChHHHHHHHHHHH----HCCCeeEEEEeCCCCCchhH-HHHHHHHhCCCCEEEEcc--------hHHHHhcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAA----QNKKLFRVLCTEGRPDRSGL-RLANELAKLDVPVKLLID--------SAVAYTMD 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~----~~gk~f~ViV~EsrP~~eG~-~la~~L~~~GI~vtlI~D--------sav~~~m~ 282 (396)
..+++|.|.+..+..++..+. +.|. +|++.+ |.+.+. ..+..+...|+++..++- ..+-..+.
T Consensus 61 ~~v~~~~g~t~a~~~~~~~l~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 136 (382)
T 4eb5_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGK--HILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR 136 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEET--TCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC
T ss_pred CeEEEcCchHHHHHHHHHHHHhhccCCCC--EEEECC--CcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc
Confidence 356677666666666665554 3343 566553 344444 334445668998888752 23333343
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
.-.++++-...-...|.+.. --.++-+|++++++
T Consensus 137 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 170 (382)
T 4eb5_A 137 DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL 170 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE
T ss_pred CCCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE
Confidence 22234333322223355443 24678888999887
No 82
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=64.29 E-value=17 Score=33.28 Aligned_cols=108 Identities=13% Similarity=0.047 Sum_probs=63.1
Q ss_pred CceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGA 291 (396)
+.+||..|-++.+-.-+. .+.++|. .+|+++...|... -+..|...|+.+... .| .++..++..+|.|+.-|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~~V~~~~R~~~~~---~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT-FKVRVVTRNPRKK---AAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS-SEEEEEESCTTSH---HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC-ceEEEEEcCCCCH---HHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 467888898876655443 3334352 5677665544432 135566677755432 22 45666778888887655
Q ss_pred eeEeecCCeeccccHHHHHHHhhhCCCcEEEecccc
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
...-....-.|-.|+..+.-+|++.+++-+|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~ 116 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE 116 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 211000111234578888888888898887776553
No 83
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=64.26 E-value=45 Score=31.77 Aligned_cols=102 Identities=9% Similarity=-0.084 Sum_probs=55.8
Q ss_pred cCceEE--eecChHHHHHHH--HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHh
Q 016064 215 DGCTIL--VHGFSRVVMEVL--KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYT 280 (396)
Q Consensus 215 dg~~IL--T~~~S~~V~~~L--~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~ 280 (396)
.+.+++ |.|.+..+..++ ..+...|. +|++.+ |.+.|.. ..+...|.++..++. ..+...
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd--~Vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 169 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDK--LVYLSK--PTWANHM--AIFENQGLKTATYPYWANETKSLDLNGFLNA 169 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEEE--SCCTTHH--HHHHTTTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCC--EEEEeC--CCCccHH--HHHHHcCceEEEEeeecCCCCccCHHHHHHH
Confidence 456777 877777766552 33333343 466553 5555543 334557888777653 123333
Q ss_pred ccc---CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 281 MDE---VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 281 m~~---vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+ .+++++=...-...|.++..-=-..++-+|+++++++++
T Consensus 170 l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 170 IQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp HHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 332 345554333333345544433333577788999988776
No 84
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=63.72 E-value=15 Score=33.63 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=56.5
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCC-C--c--hhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCE
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRP-D--R--SGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDM 286 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP-~--~--eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~ 286 (396)
+.+||..|-++.+-..| +.+.++| ++|+++.-++ . . +.....+.|...|+.+... .| .++..++..+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 35688888766554433 3333446 4566554333 1 1 2222345666778765432 22 345666676666
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCC-CcEEEe
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMN-KPVYVA 323 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~ 323 (396)
||-- .+...-.|+..++-+|+..+ ++-+|.
T Consensus 80 vi~~-------a~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 80 VICA-------AGRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EEEC-------SSSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEEC-------CcccccccHHHHHHHHHhcCCceEEee
Confidence 6543 33344678888988899888 887774
No 85
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=63.58 E-value=36 Score=27.41 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=23.6
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
++|++++|+..-- ++---.|+..-.+ .++..+||+|+-+
T Consensus 109 ~~dliV~G~~~~~---~~~~~~Gs~~~~v-l~~~~~pVlvv~~ 147 (150)
T 3tnj_A 109 NVDLIVVGSHGRH---GLALLLGSTANSV-LHYAKCDVLAVRL 147 (150)
T ss_dssp TCSEEEEEEC-----------CCCHHHHH-HHHCSSEEEEEEC
T ss_pred CCCEEEEecCCCC---CcCeEecchHHHH-HHhCCCCEEEEeC
Confidence 8999999998632 2223457665555 4556799999753
No 86
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=63.54 E-value=35 Score=32.00 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=54.9
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-------c-hHHHHhc-c-cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-------D-SAVAYTM-D-EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-------D-sav~~~m-~-~vd~ 286 (396)
.+++|.|.+..+..++..+.+.|. +|++.+ |.+.|......+...|..+..++ | ..+-..+ + +...
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 147 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLEDGD--VILIGH--TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSV 147 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEcCcHHHHHHHHHHHHhCCCC--EEEEEC--CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcE
Confidence 355666666666666655543343 566654 34445444444566798887775 1 2233333 3 5666
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++. ..-...|.+.. -..++-+|+++++++++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~li~ 179 (393)
T 2huf_A 148 LFLT-QGDSSTGVLQG---LEGVGALCHQHNCLLIV 179 (393)
T ss_dssp EEEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEEE-ccCCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 6553 22222344433 24677888999998876
No 87
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=63.54 E-value=70 Score=30.88 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=68.7
Q ss_pred HHHHHhhccccCceEEeecChHHHHHHHHHHHHCCC-eeEEE----EeCC---CCC---------chhHHHHHHHHhC--
Q 016064 205 IAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKK-LFRVL----CTEG---RPD---------RSGLRLANELAKL-- 265 (396)
Q Consensus 205 Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi----V~Es---rP~---------~eG~~la~~L~~~-- 265 (396)
++..+.+.+.+ ..|+..|-+++--.+++.....|. ++.++ |.++ |-. .....+++.|.+.
T Consensus 26 ~G~~~q~~L~~-~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp 104 (346)
T 1y8q_A 26 WGLEAQKRLRA-SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP 104 (346)
T ss_dssp HCHHHHHHHHT-CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT
T ss_pred hCHHHHHHHhC-CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC
Confidence 34555556554 688888988876667776666674 45555 2222 111 1124557778875
Q ss_pred CCCEEEEcchH---HHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 266 DVPVKLLIDSA---VAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 266 GI~vtlI~Dsa---v~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
+++++.+...- ...++++.|.|+.+.|.. .--+.+.-.|+.+++|++.+
T Consensus 105 ~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~---------~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 105 MVDVKVDTEDIEKKPESFFTQFDAVCLTCCSR---------DVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp TSEEEEECSCGGGCCHHHHTTCSEEEEESCCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEEecccCcchHHHhcCCCEEEEcCCCH---------HHHHHHHHHHHHcCCCEEEE
Confidence 56777665421 345668899998876642 22356777889999999875
No 88
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=63.43 E-value=15 Score=33.71 Aligned_cols=99 Identities=11% Similarity=0.112 Sum_probs=58.1
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCc----hhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEE
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDR----SGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMV 287 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~----eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~V 287 (396)
..+||..|-++.+-..| +.+.++| ++|+++..++.. +-....+.|...|+.+... .| .++..+++.+|.|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 45788888876554433 3334446 566665443321 1222345566677654332 22 4556667766666
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCC-CcEEEe
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMN-KPVYVA 323 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~ 323 (396)
|.-| +..+-.|+..++-+|+..+ ++-+|.
T Consensus 82 i~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 82 ISTV-------GSLQIESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp EECC-------CGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred EECC-------cchhhhhHHHHHHHHHhcCCCceEee
Confidence 5543 4444678889999999888 887774
No 89
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=63.25 E-value=49 Score=29.75 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=30.5
Q ss_pred CchhHHHHHHHHhCCCCEEEEcchHHH-----------HhcccCCEEEE
Q 016064 252 DRSGLRLANELAKLDVPVKLLIDSAVA-----------YTMDEVDMVFV 289 (396)
Q Consensus 252 ~~eG~~la~~L~~~GI~vtlI~Dsav~-----------~~m~~vd~Vlv 289 (396)
..+=.++++.+++.|+++..|++..-+ .+.+.+|.+|.
T Consensus 121 t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 121 NTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 344456788999999999999998766 66788998885
No 90
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=63.20 E-value=12 Score=31.23 Aligned_cols=62 Identities=13% Similarity=0.263 Sum_probs=36.5
Q ss_pred HHHHhCCCCEEE---EcchH----HHHhcc--cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEecc
Q 016064 260 NELAKLDVPVKL---LIDSA----VAYTMD--EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 260 ~~L~~~GI~vtl---I~Dsa----v~~~m~--~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
+.+...|++++. +.... +..+.+ ++|+|++|+..- |++-. -.|+..-.+ .++.++||+|+-+
T Consensus 85 ~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g~---~~~~~~~~Gsv~~~v-l~~~~~PVlvv~~ 156 (170)
T 2dum_A 85 EEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRGK---LSLSHEFLGSTVMRV-LRKTKKPVLIIKE 156 (170)
T ss_dssp HHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCC---CC--TTCCCHHHHHH-HHHCSSCEEEECC
T ss_pred HHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCCC---CccccceechHHHHH-HHhCCCCEEEEcc
Confidence 344556888765 33222 222334 899999999852 23322 256655544 4556799999853
No 91
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=63.18 E-value=44 Score=29.85 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=53.8
Q ss_pred eEEeecChHHHHHHHHHH----HHCCCeeEEEEeCCCCC---chhHHHHHHHHhCCCCEEEEc-ch----HHHHhcccCC
Q 016064 218 TILVHGFSRVVMEVLKMA----AQNKKLFRVLCTEGRPD---RSGLRLANELAKLDVPVKLLI-DS----AVAYTMDEVD 285 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A----~~~gk~f~ViV~EsrP~---~eG~~la~~L~~~GI~vtlI~-Ds----av~~~m~~vd 285 (396)
+++-+..|..-...|..| ...+-.++++-+...+. ..-.+++..|.+.|++++... .. ++..+..+.|
T Consensus 157 ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~d 236 (268)
T 3ab8_A 157 ALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGD 236 (268)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTTE
T ss_pred EEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhCC
Confidence 444455666544444443 33365677763332221 112345677888999987642 22 2333334459
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
++++|+ .+ .+- -.|+..-.+ .++..+||+|+
T Consensus 237 liV~G~-~~--~~~---~~Gs~~~~v-l~~~~~pvlvv 267 (268)
T 3ab8_A 237 LLALGA-PV--RRL---VFGSTAERV-IRNAQGPVLTA 267 (268)
T ss_dssp EEEEEC-CC--SCC---SSCCHHHHH-HHHCSSCEEEE
T ss_pred EEEECC-cc--ccc---EeccHHHHH-HhcCCCCEEEe
Confidence 999999 11 111 245554444 45568999985
No 92
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=62.69 E-value=31 Score=33.81 Aligned_cols=98 Identities=11% Similarity=0.035 Sum_probs=54.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHH-HHHhCCCCEEEEcc---hHHHHhc-ccCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LAN-ELAKLDVPVKLLID---SAVAYTM-DEVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~-~L~~~GI~vtlI~D---sav~~~m-~~vd~VlvG 290 (396)
+.++|-|.+..+..+|+.+.+.| -+|++.+ |.+.|.. +.+ .+...|+++..++. .++...+ ++..+|++
T Consensus 98 ~~~~~~sG~~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~l- 172 (414)
T 3ndn_A 98 AAFATASGMAAVFTSLGALLGAG--DRLVAAR--SLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFF- 172 (414)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEES--CCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEcC--CccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 45666555555555554443334 3555543 4555533 232 35668999998873 3344444 45556665
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+..-++.+.. --.++-+|+++++++++
T Consensus 173 -e~p~NptG~~~~--l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 173 -ETPSNPMQSLVD--IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp -ESSCTTTCCCCC--HHHHHHHHHHTTCEEEE
T ss_pred -ECCCCCCCcccc--HHHHHHHHHHcCCEEEE
Confidence 333322233322 34688889999998887
No 93
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=62.51 E-value=27 Score=27.73 Aligned_cols=81 Identities=10% Similarity=0.081 Sum_probs=49.7
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH- 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak- 314 (396)
.+..+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|--.+..+-+
T Consensus 6 ~~~~~iLivd~~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~ 77 (147)
T 2zay_A 6 GKWWRIMLVDTQLPA-LAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANM--PK-----ISGMDLFNSLKKN 77 (147)
T ss_dssp --CEEEEEECTTGGG-GHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCC--CC-----CCHHHHHHHHHcC
Confidence 456788888887654 4556777888898888666543322 22 458999887643 21 224333444443
Q ss_pred --hCCCcEEEecccc
Q 016064 315 --SMNKPVYVAAESY 327 (396)
Q Consensus 315 --~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 78 ~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 78 PQTASIPVIALSGRA 92 (147)
T ss_dssp TTTTTSCEEEEESSC
T ss_pred cccCCCCEEEEeCCC
Confidence 3679999988654
No 94
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=62.45 E-value=29 Score=27.16 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=44.7
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
.+..+|+|+|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.|| +.+ .-|-..+..+-+.
T Consensus 16 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------~~~-----~~g~~~~~~l~~~ 83 (137)
T 2pln_A 16 RGSMRVLLIEKNSVL-GGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSD-----KNALSFVSRIKEK 83 (137)
T ss_dssp TTCSEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE------ECS-----TTHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHH-HHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE------EcC-----ccHHHHHHHHHhc
Confidence 456678888776543 3445667777888877666533222 22 3577777 222 2243333333333
Q ss_pred C-CCcEEEecccc
Q 016064 316 M-NKPVYVAAESY 327 (396)
Q Consensus 316 ~-~vPvyV~aes~ 327 (396)
. ++|+++++...
T Consensus 84 ~~~~~ii~ls~~~ 96 (137)
T 2pln_A 84 HSSIVVLVSSDNP 96 (137)
T ss_dssp STTSEEEEEESSC
T ss_pred CCCccEEEEeCCC
Confidence 5 89999987643
No 95
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=62.41 E-value=68 Score=27.15 Aligned_cols=44 Identities=11% Similarity=0.005 Sum_probs=31.7
Q ss_pred EeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEE
Q 016064 246 CTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFV 289 (396)
Q Consensus 246 V~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~Vlv 289 (396)
+.-|+-..+=.++++.+++.|+++..|++..-+.+-+.+|.+|.
T Consensus 117 iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~ 160 (188)
T 1tk9_A 117 ISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLV 160 (188)
T ss_dssp ECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEE
T ss_pred EeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEE
Confidence 33333334445668888999999999999776666677898874
No 96
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=62.15 E-value=49 Score=30.14 Aligned_cols=104 Identities=14% Similarity=0.297 Sum_probs=58.6
Q ss_pred eEEeecChHHHHHHHHH----HHHCCCeeEEE-EeCCCCC-chhHHHHHHHHhCCCCEEEEc-chHHHH-hc-----ccC
Q 016064 218 TILVHGFSRVVMEVLKM----AAQNKKLFRVL-CTEGRPD-RSGLRLANELAKLDVPVKLLI-DSAVAY-TM-----DEV 284 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~----A~~~gk~f~Vi-V~EsrP~-~eG~~la~~L~~~GI~vtlI~-Dsav~~-~m-----~~v 284 (396)
+++-+..|..-...|.. |...+..++|+ |.+.... ..-.++.+.|.+.|+++.... ....+. +. .++
T Consensus 173 Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~ 252 (294)
T 3loq_A 173 VLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINA 252 (294)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCc
Confidence 44556666654444433 33346677777 4443321 122345778888999865533 222222 22 379
Q ss_pred CEEEEcceeEeecCCeecc-ccHHHHHHHhhhCCCcEEEecc
Q 016064 285 DMVFVGADGVVESGGIINM-MGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nk-iGT~~lAl~Ak~~~vPvyV~ae 325 (396)
|++++|+.. .|++-.. .|+..-.+ .++..+||+|+=+
T Consensus 253 dLlV~G~~~---~~~~~~~~~Gs~~~~v-l~~~~~pvLvv~~ 290 (294)
T 3loq_A 253 TTIFMGSRG---AGSVMTMILGSTSESV-IRRSPVPVFVCKR 290 (294)
T ss_dssp SEEEEECCC---CSCHHHHHHHCHHHHH-HHHCSSCEEEECS
T ss_pred CEEEEeCCC---CCCccceeeCcHHHHH-HhcCCCCEEEECC
Confidence 999999975 2333221 45444444 4677899999754
No 97
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=62.14 E-value=13 Score=34.77 Aligned_cols=111 Identities=12% Similarity=0.125 Sum_probs=63.0
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----c-hHHHHhccc--CCE
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----D-SAVAYTMDE--VDM 286 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----D-sav~~~m~~--vd~ 286 (396)
.+.+||..|-++-+-..| +.+.++|..++|++....+......-...+... -.++++. | ..+..++.. +|.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDH-PNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTC-TTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccC-CCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 467899999988765544 444555777899877654422111111111111 1233332 2 345556665 888
Q ss_pred EEEcceeEeecCC--------eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 287 VFVGADGVVESGG--------IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 287 VlvGAd~V~~NG~--------v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
||--|-....+.. -.|-.||..+.-+|+..+++-+|.+.+
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 8876543221111 357789999999999999985554444
No 98
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=62.03 E-value=16 Score=33.71 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=57.9
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--c-hHHHHhcccCCEEEEcce
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--D-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--D-sav~~~m~~vd~VlvGAd 292 (396)
.+||..|-++.+-..+ +.+.++| ++|+++...+. .-......|...|+.+.... | .++..+++.+|.||.-|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a- 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL- 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC-
T ss_pred CeEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC-
Confidence 3688888776554433 3334446 45665544432 22233455667787654322 2 45666677666666543
Q ss_pred eEeecCCeeccccHHHHHHHhhhCC-CcEEEe
Q 016064 293 GVVESGGIINMMGTYQIALVAHSMN-KPVYVA 323 (396)
Q Consensus 293 ~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~ 323 (396)
+..+-.|+..+.-+|+..+ ++-+|.
T Consensus 88 ------~~~~~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 88 ------AFPQILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp ------CGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred ------chhhhHHHHHHHHHHHhcCCCCEEEe
Confidence 3334568888988898888 887774
No 99
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=62.01 E-value=30 Score=27.83 Aligned_cols=80 Identities=16% Similarity=0.117 Sum_probs=46.6
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS- 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~- 315 (396)
+..+|+|+|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|-..+..+.+.
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (154)
T 2rjn_A 6 KNYTVMLVDDEQPI-LNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRM--PE-----MGGEVFLEQVAKSY 77 (154)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHHhC
Confidence 45677877776543 3455667777888777665533222 22 357888887542 21 2243334444333
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 78 ~~~~ii~ls~~~ 89 (154)
T 2rjn_A 78 PDIERVVISGYA 89 (154)
T ss_dssp TTSEEEEEECGG
T ss_pred CCCcEEEEecCC
Confidence 479999987653
No 100
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=62.00 E-value=30 Score=32.78 Aligned_cols=101 Identities=9% Similarity=0.075 Sum_probs=53.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------hHHHHhcc-----
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------SAVAYTMD----- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------sav~~~m~----- 282 (396)
...+++|-|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|.++..++- ..+...+.
T Consensus 98 ~~~v~~t~g~t~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 171 (407)
T 2zc0_A 98 PENIVITIGGTGALDLLGRVLIDPG--DVVITEN--PSYINTL--LAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAK 171 (407)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred cceEEEecCHHHHHHHHHHHhcCCC--CEEEEeC--CChHHHH--HHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcc
Confidence 3457777776777666666554334 3566544 5555543 345567887776642 23333343
Q ss_pred --cCCEEEEcceeEeecCCeeccccH-HHHHHHhhhCCCcEEE
Q 016064 283 --EVDMVFVGADGVVESGGIINMMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 --~vd~VlvGAd~V~~NG~v~nkiGT-~~lAl~Ak~~~vPvyV 322 (396)
++..|++-...=...|.+.. ... ..++-+|+++++++++
T Consensus 172 ~~~~~~v~~~~~~~nptG~~~~-~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 172 GQKVKLIYTIPTGQNPMGVTMS-MERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp TCCEEEEEECCSSCTTTCCCCC-HHHHHHHHHHHHHHTCEEEE
T ss_pred cCCceEEEECCCCCCCCCcCCC-HHHHHHHHHHHHHcCCEEEE
Confidence 23333221111111233322 221 2677789999998876
No 101
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=61.89 E-value=42 Score=31.32 Aligned_cols=104 Identities=11% Similarity=0.025 Sum_probs=60.6
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH-------HHH-hcccCC
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA-------VAY-TMDEVD 285 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa-------v~~-~m~~vd 285 (396)
....+++|-|.+..+..+++.+.+.+..-+|++. .|.+.|... .+...|.++..++-.. +.. +-++..
T Consensus 81 ~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (376)
T 3ezs_A 81 KENELISTLGSREVLFNFPSFVLFDYQNPTIAYP--NPFYQIYEG--AAKFIKAKSLLMPLTKENDFTPSLNEKELQEVD 156 (376)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCS
T ss_pred CHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEe--cCCcHhHHH--HHHHcCCEEEEcccCCCCCcchhHHhhhccCCC
Confidence 3456888888888877777666544102356654 355555443 3556788887776321 111 124566
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++. .--...|.+...--=..++-+|+++++++++
T Consensus 157 ~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 157 LVILN-SPNNPTGRTLSLEELISWVKLALKHDFILIN 192 (376)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEc-CCCCCcCCCCCHHHHHHHHHHHHHcCcEEEE
Confidence 77663 2223345555444445677778999998876
No 102
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=61.51 E-value=74 Score=29.44 Aligned_cols=99 Identities=12% Similarity=-0.019 Sum_probs=56.0
Q ss_pred CceEEeecChHHHHHHHHHHH---HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhcc-
Q 016064 216 GCTILVHGFSRVVMEVLKMAA---QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTMD- 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~---~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m~- 282 (396)
..+++|-|.+..+..++..+. +.| -+|++.++ |...+ .+...+...|.++..++- ..+-..+.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~g--d~vlv~~~-~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 135 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPN--KNVLVVST-GTFSD-RFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ 135 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSC--CEEEEECS-SHHHH-HHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCC--CeEEEEcC-CcchH-HHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc
Confidence 457777777777776666553 334 36766654 33322 223456677988877752 23333343
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhC--CCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSM--NKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~--~vPvyV 322 (396)
++..|++. ..-...|.+.. -..++-+|+++ ++++++
T Consensus 136 ~~~~~v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 136 NSYGAVTVT-HVDTSTAVLSD---LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp SCCSEEEEE-SEETTTTEECC---HHHHHHHHHHHCTTSEEEE
T ss_pred CCCCEEEEE-ccCCCcCeEcC---HHHHHHHHHhhCCCCEEEE
Confidence 45555543 22222344443 34677888888 887766
No 103
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=61.45 E-value=29 Score=28.12 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=47.7
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS- 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~- 315 (396)
+..+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.||+..+- .+ .-|--.+..+-+.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~lr~~~ 77 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ-AEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLM--PE-----MDGYALCRWLKGQP 77 (154)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCC--SS-----SCHHHHHHHHHHST
T ss_pred CCCcEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCC
Confidence 45678888876643 4455677778888887766643332 22 457888886542 22 2244444444333
Q ss_pred --CCCcEEEecccc
Q 016064 316 --MNKPVYVAAESY 327 (396)
Q Consensus 316 --~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 78 ~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 78 DLRTIPVILLTILS 91 (154)
T ss_dssp TTTTSCEEEEECCC
T ss_pred CcCCCCEEEEECCC
Confidence 578999988543
No 104
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=61.38 E-value=8 Score=35.47 Aligned_cols=87 Identities=9% Similarity=-0.001 Sum_probs=50.5
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH---HHHhcccCCEEEEcceeEeecCCe-eccc-cHHHHHHHh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA---VAYTMDEVDMVFVGADGVVESGGI-INMM-GTYQIALVA 313 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa---v~~~m~~vd~VlvGAd~V~~NG~v-~nki-GT~~lAl~A 313 (396)
....+|.|++..|...-..+.+.|.+.|+++.++.-.. +...+.++|.+|+.--.....|.. .... +...+.-.|
T Consensus 10 ~~~~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~ 89 (239)
T 1o1y_A 10 HHHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEI 89 (239)
T ss_dssp CCCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHH
T ss_pred cceeEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHH
Confidence 34678889998887666678899999999998765332 122346778777632111111110 1111 222333334
Q ss_pred hhCCCcEEEecc
Q 016064 314 HSMNKPVYVAAE 325 (396)
Q Consensus 314 k~~~vPvyV~ae 325 (396)
...++|++-+|-
T Consensus 90 ~~~~~PiLGIC~ 101 (239)
T 1o1y_A 90 LKKEIPFLGICL 101 (239)
T ss_dssp HHHTCCEEEETH
T ss_pred HHCCCCEEEEch
Confidence 457899997773
No 105
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=61.31 E-value=23 Score=31.79 Aligned_cols=36 Identities=8% Similarity=0.037 Sum_probs=29.0
Q ss_pred hHHHHHHHHh--CCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 255 GLRLANELAK--LDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 255 G~~la~~L~~--~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
=..+++.+.+ .|+++..|++..-+.+-+.+|.+|.-
T Consensus 122 ~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 122 IVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEEC
T ss_pred HHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEc
Confidence 3456888889 99999999987766677789988874
No 106
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=61.29 E-value=74 Score=28.86 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=57.6
Q ss_pred HHHHHHHHHHCCCeeEEE-EeCCCCCchhH----HHHHHHHhCCCCEEEEcc--h-HHHHhc-----ccCCEEEEcceeE
Q 016064 228 VMEVLKMAAQNKKLFRVL-CTEGRPDRSGL----RLANELAKLDVPVKLLID--S-AVAYTM-----DEVDMVFVGADGV 294 (396)
Q Consensus 228 V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~----~la~~L~~~GI~vtlI~D--s-av~~~m-----~~vd~VlvGAd~V 294 (396)
+...+.-|...+..+.++ |.+ | .++. ++++.+...|++++.... . ....++ ..+|+|++|...-
T Consensus 24 l~~A~~la~~~~a~l~ll~v~~--~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~~ 100 (290)
T 3mt0_A 24 LKRAQLIAGVTQSHLHLLVCEK--R-RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPD 100 (290)
T ss_dssp HHHHHHHHHHHCCEEEEEEECS--S-SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHHHHhcCCeEEEEEeeC--c-HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEecccC
Confidence 444555555567778877 444 3 2232 235566778999877542 2 222222 5699999999752
Q ss_pred eecCCeec-cccHHHHHHHhhhCCCcEEEecccccc
Q 016064 295 VESGGIIN-MMGTYQIALVAHSMNKPVYVAAESYKF 329 (396)
Q Consensus 295 ~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~aes~Kf 329 (396)
|++-. -.|+..-.+ .++.++||+|+-+...+
T Consensus 101 ---~~~~~~~~gs~~~~v-l~~~~~PVlvv~~~~~~ 132 (290)
T 3mt0_A 101 ---NPLKKAILTPDDWKL-LRFAPCPVLMTKTARPW 132 (290)
T ss_dssp ---CTTSTTSCCHHHHHH-HHHCSSCEEEECCCSCS
T ss_pred ---CchhhcccCHHHHHH-HhcCCCCEEEecCCCCC
Confidence 22222 257766555 56788999999755544
No 107
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=60.97 E-value=15 Score=34.25 Aligned_cols=99 Identities=19% Similarity=0.072 Sum_probs=54.8
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEc
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVG 290 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvG 290 (396)
.+.+||..|-|+-+-..|. .+.++| .+|+++..++.. .++.+... .| .++..++.++|.|+--
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 3567888888776655443 333444 566666544432 34433321 22 3455566777777765
Q ss_pred ceeEeecCC------eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 291 ADGVVESGG------IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 291 Ad~V~~NG~------v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-....+.. -.|-.||..+.-+|+..+++-+|...+
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 432211111 135679999999999999866665544
No 108
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=60.95 E-value=22 Score=34.42 Aligned_cols=97 Identities=15% Similarity=0.105 Sum_probs=55.3
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHHHH-HHhCCCCEEEEcc--hHHHHhcc-cCCEEEEcc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLANE-LAKLDVPVKLLID--SAVAYTMD-EVDMVFVGA 291 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la~~-L~~~GI~vtlI~D--sav~~~m~-~vd~VlvGA 291 (396)
++++|-|.+..+..++..+.+.| -+|++.+ |.+.+. ..... +...|+++..+.. ..+...+. +...|++
T Consensus 73 ~~~~~~~gt~a~~~al~~l~~~g--d~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~-- 146 (412)
T 2cb1_A 73 EAVVLASGQAATFAALLALLRPG--DEVVAAK--GLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFV-- 146 (412)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEET--TCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEE--
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEE--
Confidence 67777666666666665543333 3566654 455442 22333 5667999888864 23333443 3444443
Q ss_pred eeEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 292 DGVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 292 d~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+.. .|.+. . -..++-+|+++++++++
T Consensus 147 ~~~~n~~G~~~-~--l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 147 ETVANPALLVP-D--LEALATLAEEAGVALVV 175 (412)
T ss_dssp ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred eCCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 23322 34443 2 45678889999998887
No 109
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=60.85 E-value=9.8 Score=31.42 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-cchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-IDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
.++.+|.|+|..|.. ...+...|.+.|..|+.. .+..-+.- + .+.|.||+ |--++++ -| +.++-.-+
T Consensus 6 ~r~~rILiVdD~~~~-~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~-----~G-~el~~~lr 76 (123)
T 2lpm_A 6 ERRLRVLVVEDESMI-AMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGE-----PS-YPVADILA 76 (123)
T ss_dssp CCCCCEEEESSSTTT-SHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSC-----CS-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCC-----CH-HHHHHHHH
Confidence 467899999988875 345577788899998643 44332222 2 56888887 4444432 23 34555556
Q ss_pred hCCCcEEEecc
Q 016064 315 SMNKPVYVAAE 325 (396)
Q Consensus 315 ~~~vPvyV~ae 325 (396)
+.++||++++.
T Consensus 77 ~~~ipvI~lTa 87 (123)
T 2lpm_A 77 ERNVPFIFATG 87 (123)
T ss_dssp HTCCSSCCBCT
T ss_pred cCCCCEEEEec
Confidence 78999988875
No 110
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=60.81 E-value=86 Score=27.46 Aligned_cols=34 Identities=9% Similarity=0.033 Sum_probs=27.8
Q ss_pred HHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEE
Q 016064 256 LRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFV 289 (396)
Q Consensus 256 ~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~Vlv 289 (396)
.++++.+++.|+++..|++..-+.+.+.+|.+|.
T Consensus 148 i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 148 IKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp HHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred HHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 4668888899999999999766666678998876
No 111
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=60.72 E-value=9.6 Score=36.54 Aligned_cols=105 Identities=14% Similarity=0.124 Sum_probs=71.0
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhC-CCCEEEEcchHHHHhcccCCEEEEccee
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKL-DVPVKLLIDSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~-GI~vtlI~Dsav~~~m~~vd~VlvGAd~ 293 (396)
+-|.++.+-....+..++.++.+.|.+.-|++.++-|..+-.++.+.+.+. |+. ++-.+.++.+-+...+...-+..
T Consensus 71 ~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~--liGPnc~Gii~p~~~~~~~~~~~ 148 (305)
T 2fp4_A 71 GATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR--LIGPNCPGVINPGECKIGIMPGH 148 (305)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE--EECSSSCEEEETTTEEEESSCGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE--EEeCCCCeEecccccceeecccc
Confidence 357777778888999999999998877667777777665555777777787 864 56566665555443222211122
Q ss_pred EeecC--CeeccccHHHHHHH--hhhCCCcEE
Q 016064 294 VVESG--GIINMMGTYQIALV--AHSMNKPVY 321 (396)
Q Consensus 294 V~~NG--~v~nkiGT~~lAl~--Ak~~~vPvy 321 (396)
+..-| +++++.||...+++ +...++.|-
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S 180 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQS 180 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCee
Confidence 23334 68999999988776 566777774
No 112
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=60.60 E-value=29 Score=32.69 Aligned_cols=98 Identities=9% Similarity=0.086 Sum_probs=57.0
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhc-c-cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTM-D-EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m-~-~vd~ 286 (396)
.+++|.|.+..+..++..+.+.|. +|++.+ |.+.|..+...+...|.++..++- ..+-..+ + ++..
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 162 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGD--VVLIGV--AGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAI 162 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEeCchHHHHHHHHHhccCCCC--EEEEEc--CChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceE
Confidence 466776666666666666544343 566553 666664455556678888877752 2333333 3 4555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++. ..-...|.+.. + -.++-+|+++++++++
T Consensus 163 v~~~-~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 194 (393)
T 1vjo_A 163 LALV-HAETSTGARQP-L--EGVGELCREFGTLLLV 194 (393)
T ss_dssp EEEE-SEETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred EEEe-ccCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 5553 22233444443 2 3577788889988776
No 113
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=60.59 E-value=41 Score=29.18 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 256 LRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 256 ~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
.+.++.+.+.|+++..|++..-+.+-+.+|.+|.-
T Consensus 109 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 143 (201)
T 3fxa_A 109 LNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPV 143 (201)
T ss_dssp HTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEc
Confidence 34588888999999999987766777789988864
No 114
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=60.40 E-value=35 Score=35.10 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=72.0
Q ss_pred HHHHhhc--cccCceEEeecChHH----HHHHHHHHHHCC-CeeEEEEeCCCC-------------------CchhHHHH
Q 016064 206 AMLSQDF--IFDGCTILVHGFSRV----VMEVLKMAAQNK-KLFRVLCTEGRP-------------------DRSGLRLA 259 (396)
Q Consensus 206 a~~a~~~--I~dg~~ILT~~~S~~----V~~~L~~A~~~g-k~f~ViV~EsrP-------------------~~eG~~la 259 (396)
++.|+++ |++|++|...+..+. +.++.+++.+++ ++++++-.-..+ .+-|..+.
T Consensus 49 aeEAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r~~~~~~g~~~r 128 (509)
T 1xr4_A 49 LEEAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKLG 128 (509)
T ss_dssp HHHHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCCHHHH
T ss_pred HHHHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEEEEEccCCHHHH
Confidence 3455667 999999999877653 444455555444 568887431111 11233333
Q ss_pred HHHHh--CCCCEEEEcchHHHHhcc----cCCEEEEcceeEeecCCeecccc-----HHHHHHHhhhCCCcEEEec
Q 016064 260 NELAK--LDVPVKLLIDSAVAYTMD----EVDMVFVGADGVVESGGIINMMG-----TYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 260 ~~L~~--~GI~vtlI~Dsav~~~m~----~vd~VlvGAd~V~~NG~v~nkiG-----T~~lAl~Ak~~~vPvyV~a 324 (396)
+...+ ..+|..+.+-....+++. .+|..|+.|...-++|.+.-+-| +...+.++.....-|++-.
T Consensus 129 ~~i~~G~~~~P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~~~~s~~~~~a~a~~A~~VIaEV 204 (509)
T 1xr4_A 129 EEISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVLLT 204 (509)
T ss_dssp HHHHHTCCSSCEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEEEE
T ss_pred HHHHcCCCcCCeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCCcccchHHHHHHHhhCCEEEEEe
Confidence 33322 246777775334666663 68999999999999998874323 5555555655666555533
No 115
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=60.29 E-value=56 Score=30.45 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=53.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH---------HHHhc-ccCC
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA---------VAYTM-DEVD 285 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa---------v~~~m-~~vd 285 (396)
..+++|-|.+..+..+++.+ .| -+|++.+ |.+.|... .+...|.++..++... +-..+ +++.
T Consensus 77 ~~v~~~~g~~~al~~~~~~~--~g--d~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~ 148 (364)
T 1lc5_A 77 SWILAGNGETESIFTVASGL--KP--RRAMIVT--PGFAEYGR--ALAQSGCEIRRWSLREADGWQLTDAILEALTPDLD 148 (364)
T ss_dssp GGEEEESSHHHHHHHHHHHH--CC--SEEEEEE--SCCTHHHH--HHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCC
T ss_pred HHEEECCCHHHHHHHHHHHc--CC--CeEEEeC--CCcHHHHH--HHHHcCCeEEEEeCCcccccchhHHHHHhccCCCC
Confidence 45777777777766666555 45 3566543 56656443 3445688777765321 11112 3455
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++. .--...|.+...-=-..++-+|+++++++++
T Consensus 149 ~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 149 CLFLC-TPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEe-CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 55542 2222234444332234577788999998876
No 116
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=60.29 E-value=44 Score=34.48 Aligned_cols=116 Identities=18% Similarity=0.154 Sum_probs=69.9
Q ss_pred HHhhc--cccCceEEeecChHH----HHHHHHHHHHCC-CeeEEEEeCCCCC-------------------chhHHHHHH
Q 016064 208 LSQDF--IFDGCTILVHGFSRV----VMEVLKMAAQNK-KLFRVLCTEGRPD-------------------RSGLRLANE 261 (396)
Q Consensus 208 ~a~~~--I~dg~~ILT~~~S~~----V~~~L~~A~~~g-k~f~ViV~EsrP~-------------------~eG~~la~~ 261 (396)
.|+.+ |+||++|...++.+. +..++....+++ +.++++-.-..+. +-|..+ ++
T Consensus 54 EAv~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r~~~~~~g~~~-r~ 132 (519)
T 2hj0_A 54 EAIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSSGLRDKV-GA 132 (519)
T ss_dssp HHHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCHHHH-HH
T ss_pred HHHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEEEEecCCCcHH-HH
Confidence 34456 999999999998764 225555555544 5678775421211 112222 23
Q ss_pred HHhCC---CCEEEEcchHHHHhcc----cCCEEEEcceeEeecCCee---ccc--cHHHHHHHhhhCCCcEEEec
Q 016064 262 LAKLD---VPVKLLIDSAVAYTMD----EVDMVFVGADGVVESGGII---NMM--GTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 262 L~~~G---I~vtlI~Dsav~~~m~----~vd~VlvGAd~V~~NG~v~---nki--GT~~lAl~Ak~~~vPvyV~a 324 (396)
+...| +|+.|-......+++. .+|..|+.|...-++|.+. .+. |+...+.++.....-|++-.
T Consensus 133 ~i~~G~~~~P~~l~~~gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~g~s~~~s~~~~~~~a~~A~~VIaEV 207 (519)
T 2hj0_A 133 AISEGIMENPVIIRSHGGRARAIATDDIHIDVAFLGAPSSDAYGNANGTRGKTTCGSLGYAMIDAKYADQVVIVT 207 (519)
T ss_dssp HHHTTCCSSCEEECCHHHHHHHHHHTSSCCSEEEEEESEECTTSCEESSSSSSCCSCCHHHHHHHHHCSEEEEEE
T ss_pred HHHCCCCCCCceeeccCCHHHHHhcCCCCCcEEEEEecccCCCCcEEEecCccccccchhhHHHHhhCCEEEEEe
Confidence 33445 4665543333666663 5899999999999999887 333 44566666666666555543
No 117
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=60.04 E-value=45 Score=31.31 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=54.5
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----------HHHHhcc-c
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----------AVAYTMD-E 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----------av~~~m~-~ 283 (396)
...+++|.|.+..+..++..+.+.|. +|++.+ |.+.|... .+...|+++..++.. .+-..+. +
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 163 (388)
T 1j32_A 90 ADNILVTNGGKQSIFNLMLAMIEPGD--EVIIPA--PFWVSYPE--MVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK 163 (388)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEES--SCCTHHHH--HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCCC--EEEEcC--CCChhHHH--HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC
Confidence 34677887777777777766544343 566543 45555443 344578887776532 2223332 3
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
...|++. ..--..|.++.+-=-..++-+|+++++++++
T Consensus 164 ~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 164 TKLLVFN-TPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEEe-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3334332 1111234443322234667788899998877
No 118
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=59.96 E-value=45 Score=32.42 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=55.3
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHH--HHHhCCCCEEEE-cc---hHHHHhcccCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLAN--ELAKLDVPVKLL-ID---SAVAYTMDEVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~--~L~~~GI~vtlI-~D---sav~~~m~~vd~VlvG 290 (396)
+.|++-+.+..+...++.+.+.| -+|++. .|.+.|..... .+...|+++..+ .. ..+...+..-.++|+
T Consensus 75 ~~v~~~sGt~A~~~~l~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~- 149 (421)
T 2ctz_A 75 AALATASGHAAQFLALTTLAQAG--DNIVST--PNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWW- 149 (421)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEC--SCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEE-
T ss_pred ceEEecCHHHHHHHHHHHHhCCC--CEEEEe--CCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEE-
Confidence 34555444555555555543333 356654 35565544322 246789999988 42 344444543233333
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+.+...++.+.. -..++-+|++++++++|
T Consensus 150 ~~~~~n~~G~~~~--l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 150 VESIGNPALNIPD--LEALAQAAREKGVALIV 179 (421)
T ss_dssp EESSCTTTCCCCC--HHHHHHHHHHHTCEEEE
T ss_pred EECCCCCCCcccC--HHHHHHHHHHcCCEEEE
Confidence 2444433334433 45788889999998887
No 119
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=59.87 E-value=36 Score=26.91 Aligned_cols=80 Identities=18% Similarity=0.166 Sum_probs=48.5
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH--hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY--TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~--~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~ 316 (396)
..+|+++|..|.. ...+...|.+.|..|....+..-+. +- ...|.||+..+- .+| .-|.-.+..+-+..
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l--~~~----~~g~~~~~~l~~~~ 77 (140)
T 3h5i_A 5 DKKILIVEDSKFQ-AKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIEL--GEG----MDGVQTALAIQQIS 77 (140)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSC--SSS----CCHHHHHHHHHHHC
T ss_pred CcEEEEEeCCHHH-HHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccC--CCC----CCHHHHHHHHHhCC
Confidence 3577888776643 3445677778888887666643332 22 357888886532 221 23444444555557
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 78 ~~~ii~ls~~~ 88 (140)
T 3h5i_A 78 ELPVVFLTAHT 88 (140)
T ss_dssp CCCEEEEESSS
T ss_pred CCCEEEEECCC
Confidence 89999988654
No 120
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=59.86 E-value=84 Score=29.61 Aligned_cols=62 Identities=10% Similarity=-0.032 Sum_probs=39.2
Q ss_pred EeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc---ceeEeecCCeeccccHHHH
Q 016064 246 CTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG---ADGVVESGGIINMMGTYQI 309 (396)
Q Consensus 246 V~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG---Ad~V~~NG~v~nkiGT~~l 309 (396)
+.-|.--.+=...++.+++.|+++..|++..-+-+-+.+|.+|.- .+.+ .|+.-.+.||.++
T Consensus 147 IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~~~g~E~~--~~st~~~s~ta~~ 211 (306)
T 1nri_A 147 IAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPEIL--TGSSRLKSGTAQK 211 (306)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSCSS--TTCTTTHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEcCCCCccc--cCcccchhHHHHH
Confidence 333333333456688888999999999987666666778988753 3322 2334456666544
No 121
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=59.67 E-value=38 Score=32.73 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=57.2
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc-
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD- 282 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~- 282 (396)
....+++|.|.+..+..+++.+.+.|. +|++. .|.+.+.. ..+...|+++..++- ..+-..+.
T Consensus 117 ~~~~v~~t~g~t~al~~~~~~l~~~gd--~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 190 (427)
T 3dyd_A 117 EAKDVILTSGCSQAIDLCLAVLANPGQ--NILVP--RPGFSLYK--TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE 190 (427)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTTC--EEEEE--ESCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT
T ss_pred ChHHEEEecCcHHHHHHHHHHhcCCCC--EEEEc--CCCchhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence 345688888777777766666543343 56655 36665644 334567887766542 12222232
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+...|++. ..--..|.+..+--=..++-+|+++++++++
T Consensus 191 ~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 191 KTACLIVN-NPSNPCGSVFSKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp TEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEE-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 22233321 1112234444444456788889999999887
No 122
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=59.62 E-value=8.9 Score=34.96 Aligned_cols=47 Identities=6% Similarity=-0.102 Sum_probs=28.7
Q ss_pred hccc-CCEEEEcceeEeec---CCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 280 TMDE-VDMVFVGADGVVES---GGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 280 ~m~~-vd~VlvGAd~V~~N---G~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
++.. +|.||--|-....+ ---+|-.||..+.-+|+..+++-+|.+.+
T Consensus 59 ~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 59 IVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp GGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred hhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4444 77777544211000 11246789999999999999876665544
No 123
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=59.59 E-value=18 Score=34.33 Aligned_cols=73 Identities=10% Similarity=-0.026 Sum_probs=39.0
Q ss_pred CchhHHHHHHHHhCCC-CEEEEc---c-hHHHHhcccCCEEEEcceeEeec----CCeeccccHHHHHHHhhhCCCc-EE
Q 016064 252 DRSGLRLANELAKLDV-PVKLLI---D-SAVAYTMDEVDMVFVGADGVVES----GGIINMMGTYQIALVAHSMNKP-VY 321 (396)
Q Consensus 252 ~~eG~~la~~L~~~GI-~vtlI~---D-sav~~~m~~vd~VlvGAd~V~~N----G~v~nkiGT~~lAl~Ak~~~vP-vy 321 (396)
++-|..+++.|.+.|. +|..+. | ..+..++.++|.||--|-..-.. ---.|-.||..++-+|+..+++ -+
T Consensus 10 G~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~ 89 (369)
T 3st7_A 10 GFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAI 89 (369)
T ss_dssp SHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEE
T ss_pred CHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 3445555555555554 433321 1 34445566777777544221110 1124777888888888888865 44
Q ss_pred Eec
Q 016064 322 VAA 324 (396)
Q Consensus 322 V~a 324 (396)
|..
T Consensus 90 v~~ 92 (369)
T 3st7_A 90 LLS 92 (369)
T ss_dssp EEE
T ss_pred EEe
Confidence 433
No 124
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=59.55 E-value=65 Score=30.18 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=54.2
Q ss_pred cCceEE--eecChHHHHHHHHHHH--HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHh
Q 016064 215 DGCTIL--VHGFSRVVMEVLKMAA--QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYT 280 (396)
Q Consensus 215 dg~~IL--T~~~S~~V~~~L~~A~--~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~ 280 (396)
.+.+++ |.|.+..+..+++.+. ..|. +|++. .|.+.|... .+...|.++..++- ..+-..
T Consensus 92 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 165 (396)
T 2q7w_A 92 DKRARTAQTPGGTGALRVAADFLAKNTSVK--RVWVS--NPSWPNHKS--VFNSAGLEVREYAYYDAENHTLDFDALINS 165 (396)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHSCCC--EEEEE--ESCCTHHHH--HHHHTTCEEEEEECEETTTTEECHHHHHHH
T ss_pred cccEEEEecccchhhHHHHHHHHHHhCCCC--EEEEc--CCCchhHHH--HHHHcCCceEEEecccCCCCCcCHHHHHHH
Confidence 445665 7776666666654433 2343 56654 356666543 33446877766643 233334
Q ss_pred ccc---CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 281 MDE---VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 281 m~~---vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+ -+++++=...--..|.++..-=-..++-+|+++++.+++
T Consensus 166 l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 166 LNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp HTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 433 244444332222334444432233577888899988776
No 125
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=59.41 E-value=37 Score=34.31 Aligned_cols=112 Identities=18% Similarity=0.223 Sum_probs=69.4
Q ss_pred cccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCC-c-hhHHHHHHHHhCCCCEEEEc-c----hHHHHhcccC
Q 016064 213 IFDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPD-R-SGLRLANELAKLDVPVKLLI-D----SAVAYTMDEV 284 (396)
Q Consensus 213 I~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~-~-eG~~la~~L~~~GI~vtlI~-D----sav~~~m~~v 284 (396)
+..+.+||..|.++-+-..+ +...++|.. +|+++.-++. . ...++..+|.+.|..++++. | .++..++.++
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 45567888888877664444 333444532 3554433321 2 23567788988898887753 3 4556666554
Q ss_pred ------CEEEEcceeEeecCCe-------------eccccHHHHHHHhhhCCCcEEEeccc
Q 016064 285 ------DMVFVGADGVVESGGI-------------INMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 285 ------d~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|.||-.| ++..+|.+ .|-.|+..+.-+++..+..++|+..|
T Consensus 302 ~~~g~ld~VIh~A-G~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS 361 (486)
T 2fr1_A 302 GDDVPLSAVFHAA-ATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSS 361 (486)
T ss_dssp CTTSCEEEEEECC-CCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred HhcCCCcEEEECC-ccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcC
Confidence 6666554 33334432 25678999988888888888887765
No 126
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.37 E-value=24 Score=30.67 Aligned_cols=100 Identities=13% Similarity=0.034 Sum_probs=58.8
Q ss_pred ceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----c-hHHHHhcccCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----D-SAVAYTMDEVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----D-sav~~~m~~vd~VlvG 290 (396)
.+||..|-|+-+-..|.+. .++| .+|+++..+|.... .+ ..+ ++++. | ..+..+++++|.||--
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~~-~~~--~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIK-----IE-NEH--LKVKKADVSSLDEVCEVCKGADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCC-----CC-CTT--EEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccch-----hc-cCc--eEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence 5788889888776655444 4444 67887765543210 00 122 33322 2 4456677888888876
Q ss_pred ceeEeecCC--eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 291 ADGVVESGG--IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 291 Ad~V~~NG~--v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-....+.. -.|-.|+..+.-+|+..+++-+|...+
T Consensus 75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 632221111 127889999999999999876665554
No 127
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=58.96 E-value=19 Score=33.16 Aligned_cols=100 Identities=13% Similarity=-0.031 Sum_probs=56.4
Q ss_pred ceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--chHHHHhcccCCEEEEccee
Q 016064 217 CTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--DSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--Dsav~~~m~~vd~VlvGAd~ 293 (396)
.+||..|-|+.+-.-|. .+.++| .+|+++..++... . |. ++.+.... ..++..+++++|.||--|-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~----~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNK--A----IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC-------------CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCcc--c----CC--ceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 57888888887655444 344445 4677665443321 1 21 44432211 23455567777777765432
Q ss_pred Eeec----CCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 294 VVES----GGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 294 V~~N----G~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
...+ ---.|-.||..++-+|+..+++-+|...+
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 2111 11246789999999999999984554433
No 128
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=58.93 E-value=19 Score=33.54 Aligned_cols=93 Identities=19% Similarity=0.145 Sum_probs=61.1
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEccee
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~ 293 (396)
..+++|..+|+-..+.+.|. ++ ++|+|.|-.|..-|.. ..+|+.-.++++++|.|++-.-+
T Consensus 114 ~~~~kV~vIG~~p~l~~~l~-----~~-~~v~V~d~~p~~~~~~-------------~~~~~~e~~~l~~~D~v~iTGsT 174 (249)
T 3npg_A 114 DEIKRIAIIGNMPPVVRTLK-----EK-YEVYVFERNMKLWDRD-------------TYSDTLEYHILPEVDGIIASASC 174 (249)
T ss_dssp SCCSEEEEESCCHHHHHHHT-----TT-SEEEEECCSGGGCCSS-------------EECGGGHHHHGGGCSEEEEETTH
T ss_pred cCCCEEEEECCCHHHHHHHh-----cc-CCEEEEECCCcccCCC-------------CCChhHHHhhhccCCEEEEEeee
Confidence 45589999999987555542 23 7999999999864321 13675555799999999886544
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEecccccccccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLY 333 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~~ 333 (396)
++|+ |..--+.......+++++.+|.-+.+.+
T Consensus 175 ------lvN~--Ti~~lL~~~~~~~~vvl~GPS~~~~P~~ 206 (249)
T 3npg_A 175 ------IVNG--TLDMILDRAKKAKLIVITGPTGQLLPEF 206 (249)
T ss_dssp ------HHHT--CHHHHHHHCSSCSEEEEESGGGCSCGGG
T ss_pred ------eccC--CHHHHHHhCcccCeEEEEecCchhhHHH
Confidence 3333 3332222223455788999988777653
No 129
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=58.91 E-value=50 Score=29.00 Aligned_cols=103 Identities=13% Similarity=0.068 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhc--cccCceEEeecChH---HHHHHHHHHHHCCCeeEEEEeC----CCCC-----chhHHHHHHHHhC
Q 016064 200 KARKIIAMLSQDF--IFDGCTILVHGFSR---VVMEVLKMAAQNKKLFRVLCTE----GRPD-----RSGLRLANELAKL 265 (396)
Q Consensus 200 ~a~~~Ia~~a~~~--I~dg~~ILT~~~S~---~V~~~L~~A~~~gk~f~ViV~E----srP~-----~eG~~la~~L~~~ 265 (396)
.....|+++...+ .+...+|+.|-.-. ....++..+++.||+ |++.- +.+. ..+..|. -...
T Consensus 23 ~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~gk~--v~lP~~~~~~~~m~f~~~~~~~~L~--~~~~ 98 (187)
T 1ydm_A 23 QKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQ--VCIPKCHPDTKKMQFRTYQTDDQLE--TVYA 98 (187)
T ss_dssp HHHHHHHHHHHTSHHHHTCSEEECCCCCTTSCCCHHHHHHHHHTTCE--EEEECC---CCCCCEEECCCCTTHH--HHHT
T ss_pred HHHHHHHHHHHhCHHhhhCCEEEEECCCCCCCCHHHHHHHHHHCCCE--EEEeEEecCCCcEEEEEeCCCCccC--cCCC
Confidence 3455566665443 35677898884211 134566677777874 45432 2211 1122232 2356
Q ss_pred CCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHH
Q 016064 266 DVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTY 307 (396)
Q Consensus 266 GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~ 307 (396)
||+--.- +..-..-..++|.||+.+=++-.+|.=+..=|-|
T Consensus 99 gi~EP~~-~~~~~~~~~~iDlvivP~vafD~~G~RLG~GgGy 139 (187)
T 1ydm_A 99 GLLEPVI-EKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGY 139 (187)
T ss_dssp TSCCCC---CCCCCCGGGCCEEECCCSEEETTSCEECCSCCS
T ss_pred CCCCCCC-cccccCCccCCCEEEeCCeEECCCCCcccCCccH
Confidence 7632110 0000001357899999999999999877766554
No 130
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=58.78 E-value=46 Score=32.95 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=53.2
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHH-HH-HHHhCCCCEEEEcc---hHHHHhcccCCEEEEcce
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-AN-ELAKLDVPVKLLID---SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~l-a~-~L~~~GI~vtlI~D---sav~~~m~~vd~VlvGAd 292 (396)
.|++-+.+..+..+|....+.| -+|++. .|.+.|..- .. .+...|+++..+.- .++...+..-.++|+ .+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~G--d~Vi~~--~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~-~e 174 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAG--DSVVTT--DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLF-LE 174 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEE-EE
T ss_pred EEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEE-EE
Confidence 4554444444444554443334 356554 345545432 33 56788999999873 344445543334444 33
Q ss_pred eEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 293 GVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 293 ~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.... .|.+. . --.++-+|++++++++|
T Consensus 175 ~p~NptG~~~-d--l~~i~~la~~~g~~liv 202 (430)
T 3ri6_A 175 TISNPQLQVA-D--LEALSKVVHAKGIPLVV 202 (430)
T ss_dssp SSCTTTCCCC-C--HHHHHHHHHTTTCCEEE
T ss_pred CCCCCCCeec-C--HHHHHHHHHHcCCEEEE
Confidence 3322 34333 2 24688889999999987
No 131
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=58.59 E-value=24 Score=32.61 Aligned_cols=103 Identities=12% Similarity=0.079 Sum_probs=57.4
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcce
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd 292 (396)
.+||..|-++-+-.-| +.+.++| .+|+++..++... ..|.+.++.+... .| .++..++.++|.||--|-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4788889887765544 3444445 5777665444321 1233335543321 12 456667788888877553
Q ss_pred eEeec-CC-----eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 293 GVVES-GG-----IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 293 ~V~~N-G~-----v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
..-.. .. -+|-.||..+.-+|+.++++-+|...+
T Consensus 87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 22110 01 146779999999999888755554444
No 132
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=58.58 E-value=37 Score=26.18 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=45.3
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+++|..|.. ...+...|.+.|..|....+..-+. .+ .+.|.||+..+--- .-|--.+..+-+ ..
T Consensus 7 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~-------~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVF-RSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPR-------MNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCC-------CCHHHHHHHHHhcCC
Confidence 4577777776543 3445667777888777666543332 22 45788888765322 223333333333 35
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 79 ~~~ii~~t~~~ 89 (130)
T 3eod_A 79 QTPVLVISATE 89 (130)
T ss_dssp CCCEEEEECCC
T ss_pred CCCEEEEEcCC
Confidence 79999988654
No 133
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=58.45 E-value=93 Score=27.09 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=54.1
Q ss_pred cCCChHHHHHHHHHHHHHHHccCC----CCHHHHHHHHHHHHHHHHh--------cCCCchhHHHHHHHHHHHHHhhccc
Q 016064 108 KQPDLAEAVAAIRALAAVIRNSEA----KTMMELEIELKKASDSLKS--------WDTTSISLTAGCDLFMRYVTRTSAL 175 (396)
Q Consensus 108 ~~~~ia~~IAAi~aL~~vI~~~~~----~t~~eL~~~L~~~~~~L~~--------aRPt~v~L~na~~~f~r~i~r~~~~ 175 (396)
|.+++.+|+..|..+...+...+. .+..++...|+.++..|.. +|-++..|..+.+.|-+...+.+..
T Consensus 6 Gqrdvd~Ai~~I~~as~~l~~~~~~~~~~~~~~~Q~eL~~aA~~Ln~A~~~vv~aargsp~~La~as~~f~~~~~~l~~a 85 (158)
T 2l10_A 6 TQRDVDNALRAVGDASKRLLSDLLPPSTGTFQEAQSRLNEAAAGLNQAATELVQASRGTPQDLARASGRFGQDFSTFLEA 85 (158)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTTCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 556778888888888777744332 2566777777665555543 4777888999988887765544321
Q ss_pred -----ccCCHHHHHHHHHHHHHHH
Q 016064 176 -----EYEDFNSARSRLIERAEKF 194 (396)
Q Consensus 176 -----~~~~~~~~k~~Lie~i~~f 194 (396)
......+.|+.++...+..
T Consensus 86 g~~mag~~~~~~~r~~iv~~L~~v 109 (158)
T 2l10_A 86 GVEMAGQAPSQEDRAQVVSNLKGI 109 (158)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHHHHHHHHHHHH
Confidence 2222334455555554443
No 134
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=58.19 E-value=24 Score=29.01 Aligned_cols=62 Identities=24% Similarity=0.455 Sum_probs=36.8
Q ss_pred HHHHhCCCCEEEEc-ch----HHHHhcc--cCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEecc
Q 016064 260 NELAKLDVPVKLLI-DS----AVAYTMD--EVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 260 ~~L~~~GI~vtlI~-Ds----av~~~m~--~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
+.+...|++++... .. ++..+.+ ++|++++|+.+- |++-. -.|+..-.++ ++..+||+|+-+
T Consensus 90 ~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~---~~~~~~~~GSv~~~vl-~~~~~pVlvv~~ 159 (162)
T 1mjh_A 90 KELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGK---TNLKEILLGSVTENVI-KKSNKPVLVVKR 159 (162)
T ss_dssp HHHHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCS---SCCTTCSSCHHHHHHH-HHCCSCEEEECC
T ss_pred HHHHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCC---CCccceEecchHHHHH-HhCCCCEEEEeC
Confidence 34556788876432 22 2222223 899999999863 22222 2576655554 456899999853
No 135
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=58.02 E-value=11 Score=34.38 Aligned_cols=102 Identities=11% Similarity=0.083 Sum_probs=58.4
Q ss_pred eEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEccee
Q 016064 218 TILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd~ 293 (396)
+||..|-++.+-..+.+ +.+. ...+|+++.-+|.. +..|...|+.+... .| .++..++..+|.||.-|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~-----~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEK-----VPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGG-----SCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHH-----HHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 57777877766554433 3333 12455554333321 12234456544332 23 4566677888877765522
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEecccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
.. ..-.|-.|+..+.-+|+..+++-+|...++
T Consensus 76 ~~--~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 76 IH--PSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp CC--SHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred Cc--cchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 11 112356788999999999998877777664
No 136
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=57.95 E-value=13 Score=35.26 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhc----cccCceEEeecChHHHHHHHHHHHHC--CCeeEEEEeCC------CCCchhHHHHHHHHhC-CC
Q 016064 201 ARKIIAMLSQDF----IFDGCTILVHGFSRVVMEVLKMAAQN--KKLFRVLCTEG------RPDRSGLRLANELAKL-DV 267 (396)
Q Consensus 201 a~~~Ia~~a~~~----I~dg~~ILT~~~S~~V~~~L~~A~~~--gk~f~ViV~Es------rP~~eG~~la~~L~~~-GI 267 (396)
..+.|+..|+++ |++|++|. .+.++|+..+....... .+..+|+-+.+ .|......++..|.+. |+
T Consensus 91 ~k~~ia~~AA~~l~~~i~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~~~~ 169 (315)
T 2w48_A 91 QLSAMGQHGALLVDRLLEPGDIIG-FSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKA 169 (315)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEE-ECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEE-ECChHHHHHHHHhhccccCCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHHHCC
Confidence 345677777665 88887655 57888888777665331 24577775532 3344455678888765 77
Q ss_pred CEEEE--cc---hH-HHH-hc------------ccCCEEEEccee
Q 016064 268 PVKLL--ID---SA-VAY-TM------------DEVDMVFVGADG 293 (396)
Q Consensus 268 ~vtlI--~D---sa-v~~-~m------------~~vd~VlvGAd~ 293 (396)
++..+ |+ +. ... ++ +++|+.|+|.-+
T Consensus 170 ~~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIGg 214 (315)
T 2w48_A 170 ESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGS 214 (315)
T ss_dssp EECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCBC
T ss_pred ceeEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccCc
Confidence 66543 21 11 111 11 589999999973
No 137
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=57.91 E-value=38 Score=26.01 Aligned_cols=78 Identities=13% Similarity=0.099 Sum_probs=45.5
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh---h
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH---S 315 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak---~ 315 (396)
.+|+++|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+- .+ .-|--.+..+-+ .
T Consensus 4 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVEDYQAA-AETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFIDLNL--PD-----TSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECSCHHH-HHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEESBC--SS-----SBHHHHHHHHHHSCCS
T ss_pred ceEEEEcCCHHH-HHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHHhhhcc
Confidence 567777776543 34456677777887776666433322 2 457888887643 21 224444444433 3
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 76 ~~~~ii~~s~~~ 87 (127)
T 3i42_A 76 KTSKFVAVSGFA 87 (127)
T ss_dssp SCCEEEEEECC-
T ss_pred CCCCEEEEECCc
Confidence 568999987543
No 138
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=57.57 E-value=99 Score=27.10 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=27.4
Q ss_pred chhHHHHHHHHhCCCCEEEEcchHHHHhcccC---CEEEE
Q 016064 253 RSGLRLANELAKLDVPVKLLIDSAVAYTMDEV---DMVFV 289 (396)
Q Consensus 253 ~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~v---d~Vlv 289 (396)
.+=.+.++.+++.|+++..|++..-+-+-+.+ |.+|.
T Consensus 128 ~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 128 ENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 33456688888899999999887666666667 87775
No 139
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=57.25 E-value=49 Score=30.98 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=55.9
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~ 286 (396)
.+++|.|.+..+..++..+.+.|. +|++.+ |.+.|..+...+...|+++..++. ..+-..+. ++..
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 146 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLEEGD--RVLIAV--NGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKC 146 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSE
T ss_pred EEEECCcHHHHHHHHHHHhcCCCC--eEEEEc--CCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCE
Confidence 355666666666656655543343 566553 556665544456677988877752 23333333 5666
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++. ..-...|.+.. --.++-+|+++++.+++
T Consensus 147 v~~~-~~~nptG~~~~---~~~i~~l~~~~~~~li~ 178 (396)
T 2ch1_A 147 LFLT-HGDSSSGLLQP---LEGVGQICHQHDCLLIV 178 (396)
T ss_dssp EEEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEEE-CCCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 6652 22233455554 23577788889987765
No 140
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=57.24 E-value=26 Score=30.24 Aligned_cols=99 Identities=14% Similarity=0.095 Sum_probs=56.3
Q ss_pred eEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cchHHHHhcccCCEEEEcceeE
Q 016064 218 TILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--IDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+||..|-|+-+-..| +.+.++| .+|+++.-+|. . ...|...++.+... .|... ..+..+|.||--|-..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~----~-~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQ----K-AADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHH----H-HHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEeccc----c-cccccCCCceEEecccccccH-hhcccCCEEEECCccC
Confidence 477778777665544 4444555 46666643321 1 23444456544321 22222 5567777776654222
Q ss_pred -eecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 295 -VESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 295 -~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
.....-.|-.||..+.-+|+..+..++.++
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 111123488899999999999886666664
No 141
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=57.10 E-value=37 Score=30.99 Aligned_cols=96 Identities=19% Similarity=0.085 Sum_probs=52.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~ 286 (396)
.+++|.|.+..+..++..+.+ -+|++.+ |...|..+...+...|+++..++- ..+-..+. ++..
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~~----d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 127 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLDR----GPVLVLV--NGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRM 127 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCSC----CCEEEEE--CSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSE
T ss_pred eEEEcCCcHHHHHHHHHHhcC----CcEEEEc--CCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCE
Confidence 456665555555545443321 2566553 334444344555678998887752 23333333 4555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++ ...-...|.+.. -..++-+|+++++++++
T Consensus 128 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 128 VAL-VHGETSTGVLNP---AEAIGALAKEAGALFFL 159 (353)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEE-EccCCCcceecC---HHHHHHHHHHcCCeEEE
Confidence 554 233233455554 34677889999987776
No 142
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=57.02 E-value=39 Score=25.66 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=43.2
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
+|+++|..|.. ...+...|...|..|....+..-+. .+ ...|.|++..+- .++ -|-..+..+.+..++|
T Consensus 4 ~ilivdd~~~~-~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~d~~l--~~~-----~g~~~~~~l~~~~~~~ 75 (122)
T 1zgz_A 4 HIVIVEDEPVT-QARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINL--PDE-----NGLMLTRALRERSTVG 75 (122)
T ss_dssp EEEEECSSHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SSS-----CHHHHHHHHHTTCCCE
T ss_pred EEEEEECCHHH-HHHHHHHHHHCCCeEEEecCHHHHHHHHhcCCCCEEEEeCCC--CCC-----ChHHHHHHHHhcCCCC
Confidence 56677766543 3445566677777776655533222 12 357888876432 221 2433444444456789
Q ss_pred EEEecccc
Q 016064 320 VYVAAESY 327 (396)
Q Consensus 320 vyV~aes~ 327 (396)
+++++...
T Consensus 76 ii~~s~~~ 83 (122)
T 1zgz_A 76 IILVTGRS 83 (122)
T ss_dssp EEEEESSC
T ss_pred EEEEECCC
Confidence 98887543
No 143
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=56.92 E-value=27 Score=32.21 Aligned_cols=99 Identities=10% Similarity=0.105 Sum_probs=57.1
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCC-C---chhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEE
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRP-D---RSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMV 287 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP-~---~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~V 287 (396)
..+||..|-++.+-..+ +.+.++| ++|+++..++ . .+.......|...|+.+... .| .++..+++.+|.|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 34678888766543333 3334445 4566554433 1 12222334566677655432 22 3566667766666
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCC-CcEEEe
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMN-KPVYVA 323 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~-vPvyV~ 323 (396)
|.-| +...-.|+..++-+|++.+ ++-+|.
T Consensus 82 i~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 82 ISAL-------PFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp EECC-------CGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred EECC-------CccchhhHHHHHHHHHHhCCccEEec
Confidence 5533 3334678889998998888 887774
No 144
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=56.89 E-value=37 Score=26.07 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=44.3
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+.- + .+.|.|++..+ +++ .-|--.+..+-+.+++|
T Consensus 4 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~--~p~-----~~g~~~~~~lr~~~~~~ 75 (120)
T 3f6p_A 4 KILVVDDEKPI-ADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIM--LPN-----KDGVEVCREVRKKYDMP 75 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETT--STT-----THHHHHHHHHHTTCCSC
T ss_pred eEEEEECCHHH-HHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCC--CCC-----CCHHHHHHHHHhcCCCC
Confidence 56667665542 33445667777777766555433221 2 35788877543 222 23555555555567899
Q ss_pred EEEeccc
Q 016064 320 VYVAAES 326 (396)
Q Consensus 320 vyV~aes 326 (396)
+++++..
T Consensus 76 ii~~t~~ 82 (120)
T 3f6p_A 76 IIMLTAK 82 (120)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9998754
No 145
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=56.84 E-value=33 Score=31.13 Aligned_cols=70 Identities=16% Similarity=0.299 Sum_probs=41.2
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc--c
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD--E 283 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~--~ 283 (396)
.||.-|..+....+|. +.++|. .++|. |+=.+|...|.+.| .+.|||+..+.. ..+...++ +
T Consensus 11 ~vl~SG~gsnl~all~-~~~~~~l~~~I~~Visn~~~a~~l~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 86 (209)
T 4ds3_A 11 VIFISGGGSNMEALIR-AAQAPGFPAEIVAVFSDKAEAGGLAKA---EAAGIATQVFKRKDFASKEAHEDAILAALDVLK 86 (209)
T ss_dssp EEEESSCCHHHHHHHH-HHTSTTCSEEEEEEEESCTTCTHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCcHHHHHHHH-HHHcCCCCcEEEEEEECCcccHHHHHH---HHcCCCEEEeCccccCCHHHHHHHHHHHHHhcC
Confidence 4566666666555554 455453 45655 33347877776544 467999998753 33444443 5
Q ss_pred CCEEEEcc
Q 016064 284 VDMVFVGA 291 (396)
Q Consensus 284 vd~VlvGA 291 (396)
+|.+++-+
T Consensus 87 ~Dliv~ag 94 (209)
T 4ds3_A 87 PDIICLAG 94 (209)
T ss_dssp CSEEEESS
T ss_pred CCEEEEec
Confidence 77776643
No 146
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=56.64 E-value=60 Score=32.29 Aligned_cols=98 Identities=11% Similarity=0.096 Sum_probs=55.5
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHH-HHHhCCCCEEEEcc---hHHHHhcc-cC-CEEEE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LAN-ELAKLDVPVKLLID---SAVAYTMD-EV-DMVFV 289 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~-~L~~~GI~vtlI~D---sav~~~m~-~v-d~Vlv 289 (396)
+.|++-+.+..+..++....+.| -+|++.+ |.+.|.. +.+ .+...|+++++++. ..+...+. +. .+|++
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~l 206 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVPAG--GHIVTTT--DCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFT 206 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSCSS--CEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCC--CEEEEcC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEE
Confidence 45665555555555554444434 3666665 6666533 223 36678999999863 33444443 33 44444
Q ss_pred cceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 290 GADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 290 GAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+..-.+.+..+ -.++-+|++++++++|
T Consensus 207 --e~p~NptG~v~dl--~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 207 --ESPTNPFLRCVDI--ELVSKLCHEKGALVCI 235 (445)
T ss_dssp --ESSCTTTCCCCCH--HHHHHHHHHTTCEEEE
T ss_pred --eCCCCCCCcccCH--HHHHHHHHHcCCEEEE
Confidence 2333222333332 4788889999998876
No 147
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=56.53 E-value=56 Score=30.47 Aligned_cols=101 Identities=9% Similarity=0.040 Sum_probs=56.6
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-----------hHHHHhcc-
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-----------SAVAYTMD- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-----------sav~~~m~- 282 (396)
...+++|-|.+..+..++..+.+.|. +|++. .|.+.|.. ..+...|.++..++- ..+-..+.
T Consensus 85 ~~~i~~~~g~~~a~~~~~~~l~~~gd--~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 158 (391)
T 3dzz_A 85 EDWCVFASGVVPAISAMVRQFTSPGD--QILVQ--EPVYNMFY--SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT 158 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTTC--EEEEC--SSCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS
T ss_pred HHHEEECCCHHHHHHHHHHHhCCCCC--eEEEC--CCCcHHHH--HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc
Confidence 44577776666666666665543343 45543 35555543 334456776665432 23444443
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+...|++ ...-...|.++..---..++-+|+++++++++
T Consensus 159 ~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 159 PSVRMMVF-CNPHNPIGYAWSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 4445544 22223345555544555677789999998887
No 148
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=56.45 E-value=45 Score=25.95 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=48.2
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHh-CCCC-EEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAK-LDVP-VKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~-~GI~-vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
+..+|+++|..|.. ...+...|.+ .|+. |....+..-+. .+ ...|.||+..+- . ..-|...+..+.+
T Consensus 7 ~~~~iLivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~-----~~~g~~~~~~l~~ 78 (143)
T 3cnb_A 7 NDFSILIIEDDKEF-ADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMM--V-----GMDGFSICHRIKS 78 (143)
T ss_dssp --CEEEEECSCHHH-HHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTC--T-----TSCHHHHHHHHHT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEeccc--C-----CCcHHHHHHHHHh
Confidence 45788888887653 4455777887 8999 77666643332 22 457888887543 1 1234433444433
Q ss_pred ---hCCCcEEEecccc
Q 016064 315 ---SMNKPVYVAAESY 327 (396)
Q Consensus 315 ---~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 79 ~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 79 TPATANIIVIAMTGAL 94 (143)
T ss_dssp STTTTTSEEEEEESSC
T ss_pred CccccCCcEEEEeCCC
Confidence 3578999988654
No 149
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=56.43 E-value=48 Score=31.88 Aligned_cols=103 Identities=10% Similarity=0.084 Sum_probs=54.4
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------hHHHHhcc----
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------SAVAYTMD---- 282 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------sav~~~m~---- 282 (396)
....+++|-|.+..+..++....+.| -+|++.+ |.+.|.. ..+...|.++..++. .++-..+.
T Consensus 108 ~~~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~ 181 (425)
T 1vp4_A 108 DEDNLIFTVGSQQALDLIGKLFLDDE--SYCVLDD--PAYLGAI--NAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDK 181 (425)
T ss_dssp CGGGEEEEEHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHH
T ss_pred CcccEEEeccHHHHHHHHHHHhCCCC--CEEEEeC--CCcHHHH--HHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhh
Confidence 34567888777777666665543334 3555543 5565544 334457887766642 22333332
Q ss_pred -----cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -----EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -----~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++-...-...|.++..---..++-+|+++++++++
T Consensus 182 ~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 182 NGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp TTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3444432111111224443322223577889999998876
No 150
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=56.40 E-value=52 Score=31.02 Aligned_cols=101 Identities=8% Similarity=0.004 Sum_probs=54.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-----------hHHHHhcc-
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-----------SAVAYTMD- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-----------sav~~~m~- 282 (396)
...+++|-|.+..+..++..+.+.| -+|++. .|.+.|...+ +...|.++..++- ..+-..+.
T Consensus 89 ~~~v~~t~g~~~a~~~~~~~l~~~g--d~vl~~--~p~~~~~~~~--~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (399)
T 1c7n_A 89 TDWIINTAGVVPAVFNAVREFTKPG--DGVIII--TPVYYPFFMA--IKNQERKIIECELLEKDGYYTIDFQKLEKLSKD 162 (399)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTT--CEEEEC--SSCCTHHHHH--HHTTTCEEEECCCEEETTEEECCHHHHHHHHTC
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCC--CEEEEc--CCCcHhHHHH--HHHcCCEEEecccccCCCCEEEcHHHHHHHhcc
Confidence 3457777666666666665543323 355553 4666665432 3456776655432 22333343
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...-...|.+..+-==..++-+|+++++++++
T Consensus 163 ~~~~~v~~-~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 163 KNNKALLF-CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred CCCcEEEE-cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4444544 22222235444433344577788999998876
No 151
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=56.37 E-value=46 Score=26.22 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=45.3
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh---
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH--- 314 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak--- 314 (396)
..+|+|+|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+ +.+ .-|.-.+..+-+
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~-----~~g~~~~~~lr~~~~ 75 (136)
T 3t6k_A 4 PHTLLIVDDDDTV-AEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVL--LPG-----IDGYTLCKRVRQHPL 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESC--CSS-----SCHHHHHHHHHHSGG
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCC--CCC-----CCHHHHHHHHHcCCC
Confidence 3567777776543 33456667777887776665433321 2 45788887543 232 224444444433
Q ss_pred hCCCcEEEecccc
Q 016064 315 SMNKPVYVAAESY 327 (396)
Q Consensus 315 ~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 76 ~~~~pii~~t~~~ 88 (136)
T 3t6k_A 76 TKTLPILMLTAQG 88 (136)
T ss_dssp GTTCCEEEEECTT
T ss_pred cCCccEEEEecCC
Confidence 2478999988653
No 152
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=56.35 E-value=38 Score=25.07 Aligned_cols=77 Identities=10% Similarity=0.098 Sum_probs=44.3
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---C
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS---M 316 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~---~ 316 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.+++..+. . ..-|...+..+.+. .
T Consensus 3 ~iliv~~~~~~-~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~--~-----~~~~~~~~~~l~~~~~~~ 74 (119)
T 2j48_A 3 HILLLEEEDEA-ATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPP--P-----DQSCLLLLQHLREHQADP 74 (119)
T ss_dssp EEEEECCCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECST--T-----CCTHHHHHHHHHHTCCCS
T ss_pred EEEEEeCCHHH-HHHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCC--C-----CCCHHHHHHHHHhccccC
Confidence 56667665542 3445666777788777666533222 12 357888876542 1 12344444444444 5
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|++++++..
T Consensus 75 ~~~ii~~~~~~ 85 (119)
T 2j48_A 75 HPPLVLFLGEP 85 (119)
T ss_dssp SCCCEEEESSC
T ss_pred CCCEEEEeCCC
Confidence 79999988653
No 153
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=56.31 E-value=1e+02 Score=28.90 Aligned_cols=99 Identities=15% Similarity=0.116 Sum_probs=50.2
Q ss_pred CceEEeecChHHHHHHHHHH---HHCCCeeEEEEeCCCCCchhHH-HHHHHHh-CCCCEEEEcc---------hHHHHhc
Q 016064 216 GCTILVHGFSRVVMEVLKMA---AQNKKLFRVLCTEGRPDRSGLR-LANELAK-LDVPVKLLID---------SAVAYTM 281 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A---~~~gk~f~ViV~EsrP~~eG~~-la~~L~~-~GI~vtlI~D---------sav~~~m 281 (396)
..+++|-|.+..+..++... .+.| -+|++.+ |.+.+.. ....+.+ .|.++..++. ..+-..+
T Consensus 87 ~~v~~~~g~t~al~~~~~~l~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l 162 (406)
T 3cai_A 87 GGVVLGADRAVLLSLLAEASSSRAGLG--YEVIVSR--LDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLI 162 (406)
T ss_dssp GGEEEESCHHHHHHHHHHHTGGGGBTT--CEEEEET--TSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHC
T ss_pred CeEEEeCChHHHHHHHHHHHhhccCCC--CEEEEcC--CccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHh
Confidence 45666666565544444332 2223 3566654 4444432 2333333 5888777752 2333344
Q ss_pred c-cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 282 D-EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 282 ~-~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
. ++..|++ ...-...|.+.. + ..++-+|+++++++++
T Consensus 163 ~~~~~~v~~-~~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 200 (406)
T 3cai_A 163 SKSTRLVAV-NSASGTLGGVTD-L--RAMTKLVHDVGALVVV 200 (406)
T ss_dssp CTTEEEEEE-ESBCTTTCBBCC-C--HHHHHHHHHTTCEEEE
T ss_pred CCCceEEEE-eCCcCCccccCC-H--HHHHHHHHHcCCEEEE
Confidence 3 3333333 222122354443 2 5788889999988776
No 154
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=56.24 E-value=37 Score=31.23 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=52.5
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc---cCC
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD---EVD 285 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~---~vd 285 (396)
.+++|.|.+..+..++..+.+.|. +|++.+ .|.+ |..+...+...|+++..++- ..+-..+. ++.
T Consensus 58 ~v~~~~g~t~a~~~~~~~~~~~gd--~vi~~~-~~~~-~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 133 (366)
T 1m32_A 58 SVLLQGSGSYAVEAVLGSALGPQD--KVLIVS-NGAY-GARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTIS 133 (366)
T ss_dssp EEEEESCHHHHHHHHHHHSCCTTC--CEEEEE-SSHH-HHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCC
T ss_pred EEEEecChHHHHHHHHHHhcCCCC--eEEEEe-CCCc-cHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeE
Confidence 467776666666666655533343 455543 2333 32333444556888877652 22333333 233
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++ ...=...|.+.. --.++-+|+++++++++
T Consensus 134 ~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 134 HIAM-VHSETTTGMLNP---IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp EEEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEEE-ecccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 4432 211122366555 35788889999998776
No 155
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=56.03 E-value=98 Score=28.22 Aligned_cols=65 Identities=12% Similarity=0.176 Sum_probs=37.7
Q ss_pred HHHHHHhCCCC---EEEEcchHHHHhc-----ccCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEeccc
Q 016064 258 LANELAKLDVP---VKLLIDSAVAYTM-----DEVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 258 la~~L~~~GI~---vtlI~Dsav~~~m-----~~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
+...+.+.|++ +.+......-.++ .++|++++|+.+ .|++-. -.|+..-.+ .++..+||+|+=+.
T Consensus 233 l~~~~~~~~~~~~~~~v~~g~~~~~I~~~a~~~~~dLiV~G~~g---~~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~~ 306 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILG---RTGLSAAFLGNTAEQL-IDHIKCDLLAIKPD 306 (319)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHHTTEEEEEEECCS---CCSTHHHHHHHHHHHH-HTTCCSEEEEECCT
T ss_pred HHHHHHHhCCCcccEEEecCCcHHHHHHHHHHhCCCEEEEeccC---ccCCccccccHHHHHH-HhhCCCCEEEECCC
Confidence 34445677874 3444433333333 378999999865 233322 245554444 46678999998543
No 156
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=55.91 E-value=84 Score=28.97 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=54.5
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc---c-------hHHHHhcc----
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI---D-------SAVAYTMD---- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~---D-------sav~~~m~---- 282 (396)
.+++|.|.+..+..++..+.+.| -+|++. .|.+.|...+ +...|+++..++ | ..+-..+.
T Consensus 71 ~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 144 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSLAKKD--AWVVMD--ENCHYSSYVA--AERAGLNIALVPKTDYPDYAITPENFAQTIEETKK 144 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHH--HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT
T ss_pred EEEEeCChHHHHHHHHHHHhCCC--CEEEEc--cCcchHHHHH--HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc
Confidence 55666555666666665553333 356555 3555555544 667899888887 2 23333443
Q ss_pred --cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 --EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 --~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...-...|.+.. . ..++-+|+++++++++
T Consensus 145 ~~~~~~v~~-~~~~nptG~~~~-~--~~i~~~~~~~~~~li~ 182 (371)
T 2e7j_A 145 RGEVVLALI-TYPDGNYGNLPD-V--KKIAKVCSEYDVPLLV 182 (371)
T ss_dssp TSCEEEEEE-ESSCTTTCCCCC-H--HHHHHHHHTTTCCEEE
T ss_pred cCCeEEEEE-ECCCCCCcccCC-H--HHHHHHHHHcCCeEEE
Confidence 3333332 222123454444 2 6788889999999887
No 157
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=55.89 E-value=31 Score=27.04 Aligned_cols=57 Identities=16% Similarity=0.157 Sum_probs=42.0
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeCC-CCCchhHHHHHHHHh------CCCCEEEEcc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEG-RPDRSGLRLANELAK------LDVPVKLLID 274 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~Es-rP~~eG~~la~~L~~------~GI~vtlI~D 274 (396)
.|.+..........+......+..+.+++++- -|...|..+++.|++ ..+++.+++.
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~ 100 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSS 100 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECS
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeC
Confidence 66677777777777766555567788888874 488999999999987 3566666654
No 158
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=55.84 E-value=27 Score=31.47 Aligned_cols=102 Identities=10% Similarity=0.055 Sum_probs=59.8
Q ss_pred eEEeecChHHHHHHHHHHH-HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEccee
Q 016064 218 TILVHGFSRVVMEVLKMAA-QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~-~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd~ 293 (396)
+||..|-|+-+-.-|.+.. ++....+|+++..++.. +..|...|+.+... .| .++..++.++|.|+--|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----ASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----THHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----HhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 5778888777665554433 33114667766544432 12344456544332 22 4566677888888765431
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
- -+.-+|-.||..+.-+|++.+++-+|...+
T Consensus 77 ~--~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 77 H--YDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp C--SCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--cCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 111236789999999999999866665544
No 159
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=55.76 E-value=48 Score=25.93 Aligned_cols=79 Identities=18% Similarity=0.121 Sum_probs=47.0
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh---
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH--- 314 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak--- 314 (396)
..+|+++|..+.. ...+...|.+.|+.|....+..-+.- + ...|.||+..+- .+ .-|.-.+..+-+
T Consensus 6 ~~~iLivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~~ 77 (140)
T 3grc_A 6 RPRILICEDDPDI-ARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNL--PD-----QDGVSLIRALRRDSR 77 (140)
T ss_dssp CSEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCC--SS-----SCHHHHHHHHHTSGG
T ss_pred CCCEEEEcCCHHH-HHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCcc
Confidence 4577777776543 34456667778888776666433322 2 467888886542 22 224444444433
Q ss_pred hCCCcEEEecccc
Q 016064 315 SMNKPVYVAAESY 327 (396)
Q Consensus 315 ~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 78 ~~~~~ii~~s~~~ 90 (140)
T 3grc_A 78 TRDLAIVVVSANA 90 (140)
T ss_dssp GTTCEEEEECTTH
T ss_pred cCCCCEEEEecCC
Confidence 3579999988654
No 160
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=55.57 E-value=36 Score=31.51 Aligned_cols=97 Identities=20% Similarity=0.253 Sum_probs=52.8
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcccCCE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMDEVDM 286 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~~vd~ 286 (396)
...+++|-|.+..+..+++.+ -+|++.+ |.+.|.. ..+...|+++..++. ..+-..+.+...
T Consensus 78 ~~~i~~~~g~t~al~~~~~~~------d~vi~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 147 (361)
T 3ftb_A 78 DIGIVLGNGASEIIELSISLF------EKILIIV--PSYAEYE--INAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDS 147 (361)
T ss_dssp SCEEEEESSHHHHHHHHHTTC------SEEEEEE--SCCTHHH--HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSE
T ss_pred cceEEEcCCHHHHHHHHHHHc------CcEEEec--CChHHHH--HHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCE
Confidence 345666666666555555433 3566543 5555543 344556888887762 245555555333
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++ ...--..|.+...--=..++-+|+++++++++
T Consensus 148 v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 148 VII-GNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp EEE-ETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence 332 11122234444333344577778899998887
No 161
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=55.55 E-value=69 Score=29.30 Aligned_cols=63 Identities=10% Similarity=0.153 Sum_probs=39.2
Q ss_pred HHHhCCCCEEEEcc---hHHHHhc-----ccCCEEEEcceeEeecCCeecc-ccHHHHHHHhhhCCCcEEEecccc
Q 016064 261 ELAKLDVPVKLLID---SAVAYTM-----DEVDMVFVGADGVVESGGIINM-MGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 261 ~L~~~GI~vtlI~D---sav~~~m-----~~vd~VlvGAd~V~~NG~v~nk-iGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
.+...|++++.... .....++ ..+|+|++|...- |++-.. .|+....+ .++.++||+|+-+..
T Consensus 81 ~~~~~~v~~~~~~~~~g~~~~~i~~~a~~~~~DLiV~G~~g~---~~~~~~~~Gs~~~~v-l~~~~~PVlvv~~~~ 152 (319)
T 3olq_A 81 YYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQH---DKLGSLIFTPLDWQL-LRKCPAPVWMVKDKE 152 (319)
T ss_dssp HHHHTTCCEEEEEEECSCHHHHHHHHHHHHTCSEEEEEEBCC-----CCSCBCCHHHHHH-HHHCSSCEEEEESSC
T ss_pred HHhhcCCeEEEEEEecCChHHHHHHHHHhcCCCEEEEecCcC---chhhcccccccHHHH-HhcCCCCEEEecCcc
Confidence 34567998876433 2222222 4699999999853 222222 57776555 467789999997654
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.53 E-value=48 Score=27.36 Aligned_cols=93 Identities=17% Similarity=0.195 Sum_probs=51.9
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHH-hCCCCEEEEcch---H-HHHh-cccCCEE
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELA-KLDVPVKLLIDS---A-VAYT-MDEVDMV 287 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~-~~GI~vtlI~Ds---a-v~~~-m~~vd~V 287 (396)
..++.|+.+|....=..+...+.+.| ++|++++..|.. +..+. +.|+.+.. .|. . +... +.++|.|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~-----~~~~~~~~g~~~~~-~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYA-----FHRLNSEFSGFTVV-GDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGG-----GGGSCTTCCSEEEE-SCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHH-----HHHHHhcCCCcEEE-ecCCCHHHHHHcCcccCCEE
Confidence 45788999998766555666666556 477777766543 23344 55665432 221 1 2212 4677888
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhh-CCCcEEEe
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHS-MNKPVYVA 323 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~-~~vPvyV~ 323 (396)
|+.... ..-...++.+++. ++...+++
T Consensus 89 i~~~~~---------~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 89 FAFTND---------DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EECSSC---------HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEeCC---------cHHHHHHHHHHHHHCCCCeEEE
Confidence 776532 1223455566776 55554443
No 163
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=55.50 E-value=27 Score=32.94 Aligned_cols=104 Identities=9% Similarity=0.023 Sum_probs=58.2
Q ss_pred ccC-ceEEeecChHHHHHHHHHHHHCCC---eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HHHHh
Q 016064 214 FDG-CTILVHGFSRVVMEVLKMAAQNKK---LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AVAYT 280 (396)
Q Consensus 214 ~dg-~~ILT~~~S~~V~~~L~~A~~~gk---~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av~~~ 280 (396)
... .+++|.|.+..+..+++.+.+.|. +-+|++. .|.+.|... .+...|.++..++-. .+...
T Consensus 89 ~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~g~~~d~~~l~~~ 164 (396)
T 3jtx_A 89 DADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSP--NPFYQIYEG--ATLLGGGEIHFANCPAPSFNPDWRSISEE 164 (396)
T ss_dssp CTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEE--ESCCHHHHH--HHHHTTCEEEEEECCTTTCCCCGGGSCHH
T ss_pred CCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEc--CCCcHhHHH--HHHHcCCEEEEeecCCCCCccCHHHHHHh
Confidence 345 677787777776666665544332 1355554 356655543 345678888777521 12122
Q ss_pred c-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 281 M-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 281 m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+ +++..|++- .---..|.++..---..++-+|+++++++++
T Consensus 165 ~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 165 VWKRTKLVFVC-SPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHHTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred hccCcEEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 344555542 2222345555554445578889999998876
No 164
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=55.49 E-value=62 Score=30.37 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=54.6
Q ss_pred cCceEE--eecChHHHHHHHHHHHH--CCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHh
Q 016064 215 DGCTIL--VHGFSRVVMEVLKMAAQ--NKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYT 280 (396)
Q Consensus 215 dg~~IL--T~~~S~~V~~~L~~A~~--~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~ 280 (396)
.+.+++ |.|.+..+..+++.+.. .|. +|++. .|.+.|... .+...|.++..++. ..+-..
T Consensus 89 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 162 (394)
T 2ay1_A 89 SETTATLATVGGTGALRQALELARMANPDL--RVFVS--DPTWPNHVS--IMNFMGLPVQTYRYFDAETRGVDFEGMKAD 162 (394)
T ss_dssp GGGEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEE--ESCCHHHHH--HHHHHTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cccEEEEecCCchhHHHHHHHHHHhcCCCC--EEEEc--CCCChhHHH--HHHHcCCceEEEecccccCCccCHHHHHHH
Confidence 345666 77777777766655443 343 45554 366666543 23445777776652 233334
Q ss_pred ccc---CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 281 MDE---VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 281 m~~---vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+ .+++++=...--..|.++..-==..++-+|+++++.+++
T Consensus 163 l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 432 245544232222334443332222567788899988776
No 165
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=55.22 E-value=50 Score=25.36 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=45.9
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHH--Hhc-c-cCCEEEEcceeEeecCCeeccccHHHHHHHhh-h
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVA--YTM-D-EVDMVFVGADGVVESGGIINMMGTYQIALVAH-S 315 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~--~~m-~-~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~ 315 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+ .+- . ..|.||+..+- .+| .-|--.+..+-+ .
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l--~~~----~~g~~~~~~l~~~~ 77 (132)
T 2rdm_A 5 AVTILLADDEAIL-LLDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRF--CQP----PDGWQVARVAREID 77 (132)
T ss_dssp SCEEEEECSSHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCC--SSS----SCHHHHHHHHHHHC
T ss_pred CceEEEEcCcHHH-HHHHHHHHHHcCCEEEEECCHHHHHHHHHcCCCCCEEEEeeeC--CCC----CCHHHHHHHHHhcC
Confidence 4577778776543 345566777788887766653322 222 2 57888886542 221 123333333333 3
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 78 ~~~~ii~~s~~~ 89 (132)
T 2rdm_A 78 PNMPIVYISGHA 89 (132)
T ss_dssp TTCCEEEEESSC
T ss_pred CCCCEEEEeCCc
Confidence 479999987643
No 166
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=55.07 E-value=74 Score=30.23 Aligned_cols=97 Identities=11% Similarity=0.167 Sum_probs=54.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHH-HHH-HHhCCCCEEEEcch---HHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANE-LAKLDVPVKLLIDS---AVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~l-a~~-L~~~GI~vtlI~Ds---av~~~m~-~vd~VlvG 290 (396)
+.|++-+.+..+..+++.+.+.| -+|++. .|.+.|... ++. +...|+++..++.. .+...+. ++..|++
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 155 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQG--DHIVSA--SAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYI- 155 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCC--CEEEEc--CCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 56666666655555555544334 356655 455555433 333 36779998888632 3333343 3334443
Q ss_pred ceeEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+.. .|.+.. -..++-+|+++++++++
T Consensus 156 -~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 156 -ETPANPTLSLVD---IETVAGIAHQQGALLVV 184 (398)
T ss_dssp -ESSBTTTTBCCC---HHHHHHHHHHTTCEEEE
T ss_pred -ECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 23322 244442 46778889999998876
No 167
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=54.96 E-value=59 Score=30.95 Aligned_cols=100 Identities=9% Similarity=0.007 Sum_probs=54.5
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----------HHHHhc-ccC
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----------AVAYTM-DEV 284 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----------av~~~m-~~v 284 (396)
..+++|.|.+..+..++..+...| -+|++.+ |.+.|...+ +...|.++..++.. .+-..+ +++
T Consensus 100 ~~v~~t~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 173 (412)
T 2x5d_A 100 SEAIVTIGSKEGLAHLMLATLDHG--DTILVPN--PSYPIHIYG--AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP 173 (412)
T ss_dssp TSEEEESCHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHHH--HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCC
T ss_pred cCEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHHH--HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCc
Confidence 467777777777666665553333 3566553 566665443 33457777766521 112222 345
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..|++. ..--..|.++..---..++-+|+++++.+++
T Consensus 174 ~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 174 RMMILG-FPSNPTAQCVELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp SEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEC-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 566652 2212234444332224577788999998876
No 168
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=54.48 E-value=1.4e+02 Score=28.03 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=57.2
Q ss_pred CceEEeecChHHHHHHHHHHHH--CCCeeEEEEeCCCCCchhHHH-HHHHHhCCCCEEEEcc--------hHHHHhcccC
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ--NKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLID--------SAVAYTMDEV 284 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~--~gk~f~ViV~EsrP~~eG~~l-a~~L~~~GI~vtlI~D--------sav~~~m~~v 284 (396)
..+++|.|.+..+..+++.+.+ .++.-+|++.+ |.+.+... +..+...|+++..++. ..+-..+.+=
T Consensus 86 ~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 86 REIVFTSGATESDNLAIKGAANFYQKKGKHIITSK--TEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD 163 (423)
T ss_dssp GGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEET--TSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT
T ss_pred CeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECC--ccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC
Confidence 3677777777776666655443 12234566543 44545433 4555778998888862 2333444332
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.++++-...-...|.+.. --.++-+|+++++++++
T Consensus 164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEE
Confidence 234332222223354444 34588889999998876
No 169
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=54.40 E-value=37 Score=26.43 Aligned_cols=82 Identities=21% Similarity=0.092 Sum_probs=47.6
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE-EcchHHH--Hhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL-LIDSAVA--YTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl-I~Dsav~--~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
....+|+++|..|.. ...+...|.+.|+.|.. ..+..-+ .+- ...|.||+..+- .+ ..-|--.+..+-+
T Consensus 7 ~~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~--~~----~~~g~~~~~~l~~ 79 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLA-AATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML--CG----ALDGVETAARLAA 79 (140)
T ss_dssp -CCCEEEEECCBHHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--CS----SSCHHHHHHHHHH
T ss_pred CCCceEEEEECCHHH-HHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCC--CC----CCCHHHHHHHHHh
Confidence 445678888876543 34456677777888874 4443222 221 458888887542 10 1224333444443
Q ss_pred hCCCcEEEecccc
Q 016064 315 SMNKPVYVAAESY 327 (396)
Q Consensus 315 ~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 80 ~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 80 GCNLPIIFITSSQ 92 (140)
T ss_dssp HSCCCEEEEECCC
T ss_pred CCCCCEEEEecCC
Confidence 4789999988653
No 170
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=54.31 E-value=49 Score=30.67 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=54.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~ 286 (396)
.+++|.|.+..+. ++..+.+.| -+|++.+ |.+-|..+...+...|+++..++. ..+-..+. ++..
T Consensus 56 ~v~~~~g~t~al~-~~~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 130 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSLLKPN--DKILVVS--NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKL 130 (384)
T ss_dssp EEEEESCHHHHHH-HGGGGCCTT--CEEEEEC--SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEE
T ss_pred EEEEcCCcHHHHH-HHHhhcCCC--CEEEEec--CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcE
Confidence 3667766666666 665554333 3666654 344454455555677988888752 23333343 3444
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++- ..=...|.+.. -..++-+|+++++++++
T Consensus 131 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 131 VALT-HVETSTGVREP---VKDVINKIRKYVELIVV 162 (384)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHGGGEEEEEE
T ss_pred EEEe-CCCCCCceECc---HHHHHHHHHhcCCEEEE
Confidence 4433 22222343333 34678889999988776
No 171
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=54.27 E-value=46 Score=25.68 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=43.7
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---C
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS---M 316 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~---~ 316 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+.- + .+.|.|++... +++ .-|-..+..+-+. .
T Consensus 4 ~ILivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~~~dlvllD~~--~p~-----~~g~~~~~~l~~~~~~~ 75 (122)
T 3gl9_A 4 KVLLVDDSAVL-RKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPDLIVLXIM--MPV-----MDGFTVLKKLQEKEEWK 75 (122)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHTTBCCSEEEECSC--CSS-----SCHHHHHHHHHTSTTTT
T ss_pred eEEEEeCCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEecc--CCC-----CcHHHHHHHHHhccccc
Confidence 67777776643 33456667778888776665433322 2 45788887543 232 2243333333222 4
Q ss_pred CCcEEEeccc
Q 016064 317 NKPVYVAAES 326 (396)
Q Consensus 317 ~vPvyV~aes 326 (396)
++|+++++..
T Consensus 76 ~~pii~~s~~ 85 (122)
T 3gl9_A 76 RIPVIVLTAK 85 (122)
T ss_dssp TSCEEEEESC
T ss_pred CCCEEEEecC
Confidence 6999998854
No 172
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=54.19 E-value=91 Score=28.46 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=66.7
Q ss_pred HHHHhhccccCceEEeecChHHHHHHHHHHHHCCC-eeEEE---EeC----CCCC---------chhHHHHHHHHhC--C
Q 016064 206 AMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKK-LFRVL---CTE----GRPD---------RSGLRLANELAKL--D 266 (396)
Q Consensus 206 a~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi---V~E----srP~---------~eG~~la~~L~~~--G 266 (396)
+..+.+.+.+ .+|+..|-+++-..+++.....|. ++.++ .+| .|-. .....+++.|.+. +
T Consensus 19 g~~~q~~l~~-~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 19 ALDGQQKLLD-SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp HHHHHHHHHT-CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHhc-CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 4444555544 688888887765566666666674 44444 111 2221 2234557777764 5
Q ss_pred CCEEEEc----chHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 267 VPVKLLI----DSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 267 I~vtlI~----Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
++++.+. +..+..+++++|.||.+.|..- .-+.+.-.|+.+++|++.+.
T Consensus 98 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 98 IQLTALQQRLTGEALKDAVARADVVLDCTDNMA---------TRQEINAACVALNTPLITAS 150 (251)
T ss_dssp SEEEEECSCCCHHHHHHHHHHCSEEEECCSSHH---------HHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEeccCCHHHHHHHHhcCCEEEECCCCHH---------HHHHHHHHHHHhCCCEEEEe
Confidence 6666653 2345667789999998876432 23567778888999987654
No 173
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=54.11 E-value=79 Score=30.22 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=56.0
Q ss_pred ceEEeecChHHHHHHHH--HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc--
Q 016064 217 CTILVHGFSRVVMEVLK--MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD-- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~--~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~-- 282 (396)
.+++|.|.+..+..+++ .....|. +|++.+ |...+.. ..+...|.++..++- ..+-..+.
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~~~gd--~Vlv~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTLNPKA--KVAISD--PSWENHR--ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEEE--SCCHHHH--HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred EEEECCccHHHHHHHHHHHHHhCCCC--EEEEeC--CCcHhHH--HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 67888888877766643 2233343 455543 6666653 334557887777652 23333343
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.-+++++=...--+.|.+++.--=..++-+|+++++.+++
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 2234433222223345555444445788889999988776
No 174
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=54.08 E-value=72 Score=30.20 Aligned_cols=105 Identities=10% Similarity=-0.095 Sum_probs=55.5
Q ss_pred ccCceEE--eecChHHHHHHHH--HHHHCCC---eeEEEEeCCCCCchhHHHHHHHHhCCCC-EEEEcc----------h
Q 016064 214 FDGCTIL--VHGFSRVVMEVLK--MAAQNKK---LFRVLCTEGRPDRSGLRLANELAKLDVP-VKLLID----------S 275 (396)
Q Consensus 214 ~dg~~IL--T~~~S~~V~~~L~--~A~~~gk---~f~ViV~EsrP~~eG~~la~~L~~~GI~-vtlI~D----------s 275 (396)
..+.+++ |.|.+..+..+++ .....|+ .-+|++.+ |.+.|... .+...|.+ +..++- .
T Consensus 96 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~ 171 (412)
T 1ajs_A 96 QEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSS--PTWENHNG--VFTTAGFKDIRSYRYWDTEKRGLDLQ 171 (412)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEE--SCCTHHHH--HHHHTTCSCEEEEECEETTTTEECHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcC--CCcHHHHH--HHHHcCCceeEEEeeecCCCCccCHH
Confidence 3456777 8887777776643 2223341 03566553 56666443 34456887 766542 2
Q ss_pred HHHHhccc---CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 276 AVAYTMDE---VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 276 av~~~m~~---vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+-..+.+ -+++++-...-...|.++..-==..++-+|+++++.+++
T Consensus 172 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 172 GFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp HHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 23333332 123443333333344444332223577788999998776
No 175
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=54.03 E-value=40 Score=32.30 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=53.4
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHHHH-HHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLANE-LAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la~~-L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++-+.+..+..+++.+.+.| -+|++.+ |.+.|. ..... +...|+++..++. ..+...+. +...|++
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~~g--d~vl~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 150 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQKG--DHLIAGD--TLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYL- 150 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCCTT--CEEEEES--SCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCC--CEEEEeC--CCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEE-
Confidence 56666555544444444333334 3566654 455553 33333 5678999998863 23344443 3334443
Q ss_pred ceeEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+.. .|.+. . -..++-+|++++++++|
T Consensus 151 -~~~~nptG~~~-~--l~~i~~~~~~~~~~liv 179 (389)
T 3acz_A 151 -ESPANPTCKVS-D--IKGIAVVCHERGARLVV 179 (389)
T ss_dssp -ESSCTTTCCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred -ECCCCCCCeec-C--HHHHHHHHHHcCCEEEE
Confidence 23322 34443 3 36788889999998876
No 176
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=53.96 E-value=49 Score=31.85 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=54.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHH--HHHHhCCCCEEEEcc--hHHHHhcc-cCCEEEEcc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLA--NELAKLDVPVKLLID--SAVAYTMD-EVDMVFVGA 291 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la--~~L~~~GI~vtlI~D--sav~~~m~-~vd~VlvGA 291 (396)
+.|++-+.+..+..+++ ..+.| -+|++.+ |.+.|..-. ..+...|++++.++- ..+...+. +...|++ .
T Consensus 72 ~~i~~~sGt~a~~~al~-~~~~g--d~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~~i~~~t~lv~~-~ 145 (393)
T 1n8p_A 72 YGLAFSSGSATTATILQ-SLPQG--SHAVSIG--DVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWI-E 145 (393)
T ss_dssp EEEEESCHHHHHHHHHH-TSCSS--CEEEEES--SCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEE-C
T ss_pred cEEEECChHHHHHHHHH-HcCCC--CEEEEeC--CCchHHHHHHHHHHHHcCcEEEEeCCChHHHHHhcccCceEEEE-E
Confidence 45665555666666665 44334 3666654 666654322 245677999999873 33444453 3334443 1
Q ss_pred eeEeecCCeeccccHHHHHHHhhhC----CCcEEE
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSM----NKPVYV 322 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~----~vPvyV 322 (396)
..--..|.+. . -..++-+|+++ +++++|
T Consensus 146 ~~~nptG~~~-~--l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 146 TPTNPTLKVT-D--IQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp SSCTTTCCCC-C--HHHHHHHHHHHTTTTTCEEEE
T ss_pred CCCCCcceec-C--HHHHHHHHHHhCCCCCCEEEE
Confidence 1111234333 2 35677888888 888876
No 177
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=53.88 E-value=1.3e+02 Score=28.26 Aligned_cols=109 Identities=9% Similarity=0.018 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--c-hH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--D-SA 276 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--D-sa 276 (396)
..++.|+++. .-.+.|++-+.|..+..+++.+...| -.|++.+ |.+.+ +...+...|+++..++ | ..
T Consensus 94 ~l~~~la~~~----g~~~~i~~~sGs~a~~~~~~~~~~~g--d~v~~~~--~~~~~--~~~~~~~~g~~~~~~~~~d~~~ 163 (401)
T 1fc4_A 94 ELEQKLAAFL----GMEDAILYSSCFDANGGLFETLLGAE--DAIISDA--LNHAS--IIDGVRLCKAKRYRYANNDMQE 163 (401)
T ss_dssp HHHHHHHHHH----TCSEEEEESCHHHHHHTTHHHHCCTT--CEEEEET--TCCHH--HHHHHHTSCSEEEEECTTCHHH
T ss_pred HHHHHHHHHh----CCCcEEEeCChHHHHHHHHHHHcCCC--CEEEEcc--hhHHH--HHHHHHHcCCceEEECCCCHHH
Confidence 3445555543 21255655444555555554443323 3555543 44432 2334667899888875 2 23
Q ss_pred HHHhcc-------cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 277 VAYTMD-------EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 277 v~~~m~-------~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+-..+. ++..|++ ...-...|.+.. -..++-+|+++++++++
T Consensus 164 l~~~l~~~~~~~~~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 212 (401)
T 1fc4_A 164 LEARLKEAREAGARHVLIAT-DGVFSMDGVIAN---LKGVCDLADKYDALVMV 212 (401)
T ss_dssp HHHHHHHHHHTTCSSEEEEE-ESEETTTTEECC---HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHhhccCCCceEEEE-eCCcCCCCCCCC---HHHHHHHHHHcCCEEEE
Confidence 333443 4555555 222233454444 46788889999987766
No 178
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=53.86 E-value=50 Score=30.04 Aligned_cols=69 Identities=17% Similarity=0.364 Sum_probs=41.5
Q ss_pred EEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEc----------chHHHHhc--ccCC
Q 016064 219 ILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLI----------DSAVAYTM--DEVD 285 (396)
Q Consensus 219 ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~----------Dsav~~~m--~~vd 285 (396)
||.-|+.+....+|... ++|..++|. |.=.+|...|.+.|+ +.|||+..+. |..+...+ -++|
T Consensus 10 vl~SG~Gsnl~all~~~-~~~~~~eI~~Vis~~~~a~~~~~A~---~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D 85 (215)
T 3tqr_A 10 VLISGNGTNLQAIIGAI-QKGLAIEIRAVISNRADAYGLKRAQ---QADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPK 85 (215)
T ss_dssp EEESSCCHHHHHHHHHH-HTTCSEEEEEEEESCTTCHHHHHHH---HTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCCcHHHHHHHHHH-HcCCCCEEEEEEeCCcchHHHHHHH---HcCCCEEEeCccccCchhHhHHHHHHHHHhcCCC
Confidence 44446666666666554 445456666 333477777765544 5799998874 33444445 3578
Q ss_pred EEEEcc
Q 016064 286 MVFVGA 291 (396)
Q Consensus 286 ~VlvGA 291 (396)
.+++-+
T Consensus 86 liv~ag 91 (215)
T 3tqr_A 86 LIVLAG 91 (215)
T ss_dssp EEEESS
T ss_pred EEEEcc
Confidence 777643
No 179
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=53.86 E-value=29 Score=34.61 Aligned_cols=72 Identities=18% Similarity=0.175 Sum_probs=43.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhccc-CCEEEEcc
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDE-VDMVFVGA 291 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~-vd~VlvGA 291 (396)
.|..|+.+|-..+=...-+.+++.| ++|.+.|.++..+. .+...|.+.||++.+-.+.. ..+.. +|.|+++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~--~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPL--ELLDEDFCYMIKNP 80 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCG--GGGGSCEEEEEECT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChH--HhhcCCCCEEEECC
Confidence 3567777765443223333334445 78888898875332 34578999999887644422 23455 78877754
No 180
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=53.78 E-value=40 Score=32.23 Aligned_cols=88 Identities=13% Similarity=0.197 Sum_probs=55.2
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEcchHHHHhcccCCEEEEcce
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLIDSAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~Dsav~~~m~~vd~VlvGAd 292 (396)
.+..+|+.+|-.......++...+....-+|.|..-. .-.+++.++.+ .|+++... | ....++++|.|+...-
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g~~~~~~-~--~~eav~~aDIVi~aT~ 192 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCGVPARMA-A--PADIAAQADIVVTATR 192 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHTSCEEEC-C--HHHHHHHCSEEEECCC
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcCCeEEEe-C--HHHHHhhCCEEEEccC
Confidence 3567899999877655555544332233456665544 55678888774 48887766 4 4556789999987542
Q ss_pred e--------EeecCCeeccccHH
Q 016064 293 G--------VVESGGIINMMGTY 307 (396)
Q Consensus 293 ~--------V~~NG~v~nkiGT~ 307 (396)
+ .+..|..++-+||+
T Consensus 193 s~~pvl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 193 STTPLFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp CSSCSSCGGGCCTTCEEEECCCS
T ss_pred CCCcccCHHHcCCCcEEEECCCC
Confidence 1 13446666666664
No 181
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=53.51 E-value=1.4e+02 Score=28.06 Aligned_cols=100 Identities=16% Similarity=0.106 Sum_probs=53.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCC--CEEEEc----------------c-hHH
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDV--PVKLLI----------------D-SAV 277 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI--~vtlI~----------------D-sav 277 (396)
.+++|-|.|..+..++ .+...| -+|++.+ +...|..+...+...|+ .+..++ | ..+
T Consensus 53 ~v~~~~sgt~a~~~~~-~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l 127 (379)
T 3ke3_A 53 AVIIPGSGTYGMEAVA-RQLTID--EDCLIIR--NGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETA 127 (379)
T ss_dssp EEEEESCHHHHHHHHH-HHHCTT--CEEEEEE--CSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHH
T ss_pred EEEEcCChhHHHHHHH-HhCCCC--CeEEEEe--CCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHH
Confidence 3455555555666555 344334 3677765 44556666555666665 444442 1 234
Q ss_pred HHhcc--cCCEEEEcceeEeecCCeecccc-HHHHHHHhhhCCCcEEEe
Q 016064 278 AYTMD--EVDMVFVGADGVVESGGIINMMG-TYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 278 ~~~m~--~vd~VlvGAd~V~~NG~v~nkiG-T~~lAl~Ak~~~vPvyV~ 323 (396)
-..+. +...|++- .+-...|++...+ -..++-+|++++++++|=
T Consensus 128 ~~~i~~~~~~~v~~~--~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 128 VAKIKEDKSAIVYAP--HVETSSGIILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp HHHHHHHTCSEEEEE--SEETTTTEECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhcCCcEEEEE--eecCCCceeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44442 45555441 1111233444433 335778899999998873
No 182
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=53.25 E-value=27 Score=32.05 Aligned_cols=25 Identities=28% Similarity=0.162 Sum_probs=19.4
Q ss_pred ccccHHHHHHHhhhCCCcEEEeccc
Q 016064 302 NMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 302 nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-.||..++-+|+..+++-+|...+
T Consensus 83 n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 83 NMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 5679999999999999866665544
No 183
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=53.12 E-value=52 Score=32.63 Aligned_cols=92 Identities=14% Similarity=0.209 Sum_probs=60.3
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-----cccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-----MDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-----m~~vd~VlvG 290 (396)
++.|+.+|+++.-..+.+.+.+.| ..|+|+|..|. .++.+.+.|+++.+- |..=..+ +.+++.||+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~-----~v~~~~~~g~~vi~G-Dat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPD-----HIETLRKFGMKVFYG-DATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHH-----HHHHHHHTTCCCEES-CTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHhCCCeEEEc-CCCCHHHHHhcCCCccCEEEEC
Confidence 467888898876555555555555 56777787654 356777889987653 3222222 4678888887
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCc--EEEec
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKP--VYVAA 324 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vP--vyV~a 324 (396)
.+ +..-+..++..||+++.. +++-+
T Consensus 76 ~~---------~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 76 ID---------DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CS---------SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CC---------ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 64 345567788889987754 55444
No 184
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=52.96 E-value=99 Score=28.79 Aligned_cols=99 Identities=16% Similarity=0.003 Sum_probs=57.2
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhc---ccC
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTM---DEV 284 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m---~~v 284 (396)
..+++|.|.+..+..++..+.+.|. +|++.+ |...|..+...+...|.++..++- ..+-..+ +++
T Consensus 60 ~~v~~t~g~t~a~~~~~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 135 (392)
T 2z9v_A 60 KPVILHGEPVLGLEAAAASLISPDD--VVLNLA--SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEI 135 (392)
T ss_dssp CCEEESSCTHHHHHHHHHHHCCTTC--CEEEEE--SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTC
T ss_pred CEEEEeCCchHHHHHHHHHhcCCCC--EEEEec--CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCC
Confidence 4677777777777666665543343 566553 444444444444556888877752 2344444 245
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..|++. ..-...|.+.. --.++-+|+++++++++
T Consensus 136 ~~v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 169 (392)
T 2z9v_A 136 TVVSVC-HHDTPSGTINP---IDAIGALVSAHGAYLIV 169 (392)
T ss_dssp CEEEEE-SEEGGGTEECC---HHHHHHHHHHTTCEEEE
T ss_pred cEEEEe-ccCCCCceecc---HHHHHHHHHHcCCeEEE
Confidence 555543 22233354443 35788889999998876
No 185
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=52.90 E-value=29 Score=27.34 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=44.0
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+.. +.+ .-|...+..+-+ ..
T Consensus 4 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~---~~~-----~~g~~~~~~l~~~~~ 74 (142)
T 2qxy_A 4 TPTVMVVDESRIT-FLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDV---FEG-----EESLNLIRRIREEFP 74 (142)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEEC---TTT-----HHHHHHHHHHHHHCT
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeC---CCC-----CcHHHHHHHHHHHCC
Confidence 3567777765542 3445666777788777655533222 22 3578888864 221 123333333333 34
Q ss_pred CCcEEEeccccc
Q 016064 317 NKPVYVAAESYK 328 (396)
Q Consensus 317 ~vPvyV~aes~K 328 (396)
++|+++++....
T Consensus 75 ~~pii~ls~~~~ 86 (142)
T 2qxy_A 75 DTKVAVLSAYVD 86 (142)
T ss_dssp TCEEEEEESCCC
T ss_pred CCCEEEEECCCC
Confidence 699999876543
No 186
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=52.25 E-value=92 Score=25.14 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=56.3
Q ss_pred ceEEeec--ChHHHHHHHHHH----HHCCCeeEEE-EeCCCCC---------------chhHH----HHHHHHhCCCC-E
Q 016064 217 CTILVHG--FSRVVMEVLKMA----AQNKKLFRVL-CTEGRPD---------------RSGLR----LANELAKLDVP-V 269 (396)
Q Consensus 217 ~~ILT~~--~S~~V~~~L~~A----~~~gk~f~Vi-V~EsrP~---------------~eG~~----la~~L~~~GI~-v 269 (396)
.+++-+. .|..-...|..| ...+..+.++ |.+..+. .++.+ +...+.+.|++ +
T Consensus 17 ~ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~ 96 (156)
T 3fg9_A 17 RILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQV 96 (156)
T ss_dssp -EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Confidence 3455566 666554444443 3346667766 6665432 11222 23345567884 5
Q ss_pred EEE-cc-h----HHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 270 KLL-ID-S----AVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 270 tlI-~D-s----av~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
+.. .. . ++... . .++|.+++|+..--. +---.|+-.-.+ .++.++||+|+
T Consensus 97 ~~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~---~~~~~Gs~~~~v-l~~a~~PVlvV 155 (156)
T 3fg9_A 97 EPLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFP---HSKIAGAIGPRL-ARKAPISVIVV 155 (156)
T ss_dssp EEEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCT---TSSSCSCHHHHH-HHHCSSEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCc---cceeecchHHHH-HHhCCCCEEEe
Confidence 432 22 2 22233 1 578999999986322 222467765544 56678999986
No 187
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=52.24 E-value=43 Score=27.49 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHCCCeeEEEEeCCCCC-chhHHHHHHHHhCCCCEEEEc
Q 016064 225 SRVVMEVLKMAAQNKKLFRVLCTEGRPD-RSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 225 S~~V~~~L~~A~~~gk~f~ViV~EsrP~-~eG~~la~~L~~~GI~vtlI~ 273 (396)
+..+...|..|.++|.+.+|++...... .......+.|.+.|+++....
T Consensus 39 ~~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv~v~~~~ 88 (155)
T 1byr_A 39 APDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDS 88 (155)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCCeEEEcC
Confidence 3467788888888899999887654322 234566888999999998763
No 188
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=52.19 E-value=48 Score=31.18 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=55.0
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------------hHHHHhc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------------SAVAYTM 281 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------------sav~~~m 281 (396)
..+++|-|.+..+..++..+.+.| -+|++.+ |.+.+.. ..+...|.++..++- ..+-..+
T Consensus 103 ~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 176 (407)
T 3nra_A 103 DGLIITPGTQGALFLAVAATVARG--DKVAIVQ--PDYFANR--KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF 176 (407)
T ss_dssp TSEEEESHHHHHHHHHHHTTCCTT--CEEEEEE--SCCTHHH--HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHH
T ss_pred CcEEEeCCcHHHHHHHHHHhCCCC--CEEEEcC--CcccchH--HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHH
Confidence 467777666666666665443333 3555533 5555543 344556777766652 2333333
Q ss_pred -ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 282 -DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++...|++. ..-...|.+...---..++-+|+++++.+++
T Consensus 177 ~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 177 KAGARVFLFS-NPNNPAGVVYSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp HTTCCEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hhCCcEEEEc-CCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 345555542 2222235555444345677788999998876
No 189
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=52.05 E-value=50 Score=25.67 Aligned_cols=80 Identities=11% Similarity=0.005 Sum_probs=48.8
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--cc-CCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DE-VDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~-vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
...+|+++|..|.. ...+...|.+.|+.|....+..-+.. + .. .|.||+..+- .+ .-|--.+..+-+.
T Consensus 6 ~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~ 77 (136)
T 3hdv_A 6 ARPLVLVVDDNAVN-REALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRM--QP-----ESGLDLIRTIRAS 77 (136)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEEECSCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCeEEEECCCHHH-HHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEEEeccC--CC-----CCHHHHHHHHHhc
Confidence 35688888887653 44557778888999888776544332 2 23 7888876542 22 2243333333332
Q ss_pred --CCCcEEEecccc
Q 016064 316 --MNKPVYVAAESY 327 (396)
Q Consensus 316 --~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 78 ~~~~~~ii~~s~~~ 91 (136)
T 3hdv_A 78 ERAALSIIVVSGDT 91 (136)
T ss_dssp TTTTCEEEEEESSC
T ss_pred CCCCCCEEEEeCCC
Confidence 568999888654
No 190
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=52.00 E-value=61 Score=30.22 Aligned_cols=110 Identities=13% Similarity=0.043 Sum_probs=60.7
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHH---HHHHH---hCCCCEEEE--cc-hHHHHhcccC
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRL---ANELA---KLDVPVKLL--ID-SAVAYTMDEV 284 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~l---a~~L~---~~GI~vtlI--~D-sav~~~m~~v 284 (396)
.+.+||..|.|+-+-..|. .+.++| .+|+++..++......+ ..++. ..++.+... .| .++..++.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 3568888898887655443 444445 57776654443211222 12211 234432221 12 3456667777
Q ss_pred CEEEEcceeEeec---CC-----eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 285 DMVFVGADGVVES---GG-----IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 285 d~VlvGAd~V~~N---G~-----v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|.||--|-..... .. -+|-.||..++-+|+..+++-+|.+.+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 7777655321100 00 146789999999999999876665444
No 191
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=51.94 E-value=8.9 Score=36.10 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=53.8
Q ss_pred eEEEEeCCCCCchhHH-HHHHHHhCCCCEEEEcchHHH---HhcccCCEEEEcceeEeecCCeeccccHHHHHHHhh--h
Q 016064 242 FRVLCTEGRPDRSGLR-LANELAKLDVPVKLLIDSAVA---YTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAH--S 315 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~-la~~L~~~GI~vtlI~Dsav~---~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak--~ 315 (396)
-+|.++++....+|.. +...|.+.|++|+++....+. .-+.+.|.||++ | +-. +...-.++..+.+ +
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~-d-~~~-----~~l~~~~~~~L~~yV~ 77 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILS-D-YPA-----ERMTAQAIDQLVTMVK 77 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEE-S-CCG-----GGBCHHHHHHHHHHHH
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEc-C-Ccc-----ccCCHHHHHHHHHHHH
Confidence 4677778766655654 577899999999999987663 457899999996 3 111 1233444444443 2
Q ss_pred CCCcEEEeccccccc
Q 016064 316 MNKPVYVAAESYKFA 330 (396)
Q Consensus 316 ~~vPvyV~aes~Kf~ 330 (396)
.|-=++++.+...|.
T Consensus 78 ~GGgLi~~gG~~s~~ 92 (259)
T 3rht_A 78 AGCGLVMLGGWESYH 92 (259)
T ss_dssp TTCEEEEECSTTSSS
T ss_pred hCCeEEEecCccccc
Confidence 577788886654443
No 192
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=51.82 E-value=69 Score=30.35 Aligned_cols=102 Identities=11% Similarity=0.135 Sum_probs=53.5
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc-
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD- 282 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~- 282 (396)
....+++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|+++..++. ..+-..+.
T Consensus 103 ~~~~v~~~~g~~~al~~~~~~l~~~g--d~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 176 (416)
T 1bw0_A 103 VKDNVVLCSGGSHGILMAITAICDAG--DYALVPQ--PGFPHYET--VCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD 176 (416)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTHHHH--HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT
T ss_pred CcceEEEeCChHHHHHHHHHHhCCCC--CEEEEcC--CCcHhHHH--HHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc
Confidence 34567777777776666665553334 3566553 44555443 34567887766641 12333333
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..+|++. +---..|.+..+-=-..++-+|+++++.+++
T Consensus 177 ~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 177 KTKLLIVT-NPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp TEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEEe-CCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 22233322 2111224433322234567778999998886
No 193
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=51.71 E-value=1e+02 Score=28.78 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=52.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhc-ccCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTM-DEVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m-~~vd~ 286 (396)
.+++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|.++..++. ..+-..+ +++..
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 166 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVRNG--DEVICFD--PSYDSYAP--AIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRL 166 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEE
T ss_pred CEEEcCChHHHHHHHHHHhCCCC--CEEEEeC--CCchhHHH--HHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEE
Confidence 67777777776666665553334 3566554 44445433 44557887777652 1222333 23444
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++. ..-...|.+...-=-..++-+|+++++.+++
T Consensus 167 v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 167 VILN-TPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp EEEE-SSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred EEEe-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 4442 1111223333222224577788999988776
No 194
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.68 E-value=84 Score=29.94 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=58.0
Q ss_pred cCceEEeecChH---HHHHHHHHHHHC---CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-hHHHHhcccCCEE
Q 016064 215 DGCTILVHGFSR---VVMEVLKMAAQN---KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-SAVAYTMDEVDMV 287 (396)
Q Consensus 215 dg~~ILT~~~S~---~V~~~L~~A~~~---gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-sav~~~m~~vd~V 287 (396)
+..+||+.|.|. .+...+.+|..+ ...+.|++.-++.. -..+.+.+.+.++++.+..- .-+..+|..+|.|
T Consensus 179 ~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlv 256 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AEITAERYRTVAVEADVAPFISDMAAAYAWADLV 256 (365)
T ss_dssp SCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEE
T ss_pred CCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cccccceecccccccccccchhhhhhhhccceEE
Confidence 345888888754 455566666543 33456665444332 23556777888888877641 2377788999987
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
|. +.|...++- +-..|+|++++-
T Consensus 257 I~-------------raG~~Tv~E-~~a~G~P~Ilip 279 (365)
T 3s2u_A 257 IC-------------RAGALTVSE-LTAAGLPAFLVP 279 (365)
T ss_dssp EE-------------CCCHHHHHH-HHHHTCCEEECC
T ss_pred Ee-------------cCCcchHHH-HHHhCCCeEEec
Confidence 63 335444443 445799998753
No 195
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=51.64 E-value=65 Score=29.69 Aligned_cols=109 Identities=15% Similarity=0.019 Sum_probs=58.7
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEc----c-hHHHHhcc--cCC
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLI----D-SAVAYTMD--EVD 285 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~----D-sav~~~m~--~vd 285 (396)
.+.+||..|-|+-+-..|. ...++| .+|+++..++.. .......+.+ .|-.+.++. | ..+..++. ++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVNS-KREAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSSS-CTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCcc-hHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 4568888888876655443 344445 567777544432 2233333332 133333332 2 34555665 566
Q ss_pred EEEEcceeEeecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 286 MVFVGADGVVESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 286 ~VlvGAd~V~~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.|+--|-...... --.|-.||..+.-+|+..+++-+|...+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 6665442110000 0126678999999999988766665444
No 196
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=51.59 E-value=31 Score=32.65 Aligned_cols=89 Identities=15% Similarity=0.196 Sum_probs=61.2
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEccee
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~ 293 (396)
..|++|..+|+=..+.+++ + +..+++|.|-.|.. |. .+|.+..++++++|.|++-+-+
T Consensus 139 ~~g~kV~vIG~fP~i~~~~----~--~~~~l~V~E~~p~~------------g~----~p~~~~~~~lp~~D~viiTgst 196 (270)
T 3l5o_A 139 VKGKKVGVVGHFPHLESLL----E--PICDLSILEWSPEE------------GD----YPLPASEFILPECDYVYITCAS 196 (270)
T ss_dssp TTTSEEEEESCCTTHHHHH----T--TTSEEEEEESSCCT------------TC----EEGGGHHHHGGGCSEEEEETHH
T ss_pred cCCCEEEEECCchhHHHHH----h--cCCCEEEEECCCCC------------CC----CChhHHHHhhccCCEEEEEeeh
Confidence 3578999999876554433 2 34577888988852 22 4888899999999999986544
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEeccccccccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
++| ||..--+.-......|+++.+|.-+.+.
T Consensus 197 ------lvN--~Tl~~lL~~~~~a~~vvl~GPStp~~P~ 227 (270)
T 3l5o_A 197 ------VVD--KTLPRLLELSRNARRITLVGPGTPLAPV 227 (270)
T ss_dssp ------HHH--TCHHHHHHHTTTSSEEEEESTTCCCCGG
T ss_pred ------hhc--CCHHHHHhhCCCCCEEEEECCCchhhHH
Confidence 445 4544434333456778888998877764
No 197
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=51.29 E-value=43 Score=32.92 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=51.4
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHH-H-HHHHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-A-NELAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~l-a-~~L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++-|.+..+..+|....+.| -+|++.+ |.+.|..- . ..|...|++++++.. .++...+. +..+|++
T Consensus 99 ~~i~~ssGt~Ai~~al~~l~~~G--d~Vi~~~--~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~- 173 (415)
T 2fq6_A 99 GCVLFPCGAAAVANSILAFIEQG--DHVLMTN--TAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFL- 173 (415)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTT--CEEEEET--TSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCC--CEEEEeC--CCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEE-
Confidence 45555333333443443322334 3666654 55655442 3 335678999999862 23333443 3333333
Q ss_pred ceeEeecCCeeccccHHHHHHHhhh--CCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHS--MNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~--~~vPvyV 322 (396)
+.+..-.+.+..+ ..++-+|++ ++++|+|
T Consensus 174 -e~~~NptG~v~dl--~~I~~la~~~~~g~~liv 204 (415)
T 2fq6_A 174 -ESPGSITMEVHDV--PAIVAAVRSVVPDAIIMI 204 (415)
T ss_dssp -ESSCTTTCCCCCH--HHHHHHHHHHCTTCEEEE
T ss_pred -ECCCCCCCEeecH--HHHHHHHHhhcCCCEEEE
Confidence 2322222223333 578888999 9999887
No 198
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=51.27 E-value=1.5e+02 Score=27.44 Aligned_cols=110 Identities=12% Similarity=0.041 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SA 276 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sa 276 (396)
..++.|+++. .-.+.|++-+.|..+..++..+.+.|. .|++. .|.+.+ ....+...|.++..++. ..
T Consensus 88 ~l~~~la~~~----g~~~~i~~~sGt~a~~~~~~~~~~~gd--~v~~~--~~~~~~--~~~~~~~~g~~~~~~~~~d~~~ 157 (384)
T 1bs0_A 88 ALEEELAEWL----GYSRALLFISGFAANQAVIAAMMAKED--RIAAD--RLSHAS--LLEAASLSPSQLRRFAHNDVTH 157 (384)
T ss_dssp HHHHHHHHHH----TCSEEEEESCHHHHHHHHHHHHCCTTC--EEEEE--TTCCHH--HHHHHHTSSSEEEEECTTCHHH
T ss_pred HHHHHHHHHh----CCCcEEEeCCcHHHHHHHHHHhCCCCc--EEEEc--ccccHH--HHHHHHHcCCCEEEeCCCCHHH
Confidence 3445555443 112455555556666665544433233 44443 344433 23345557888887762 23
Q ss_pred HHHhcccC---CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 277 VAYTMDEV---DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 277 v~~~m~~v---d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+...+.+. .++++-...-...|.+.. -..++-+|+++++++++
T Consensus 158 l~~~l~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 203 (384)
T 1bs0_A 158 LARLLASPCPGQQMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMV 203 (384)
T ss_dssp HHHHHHSCCSSCEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 33344332 333332211123455554 35788889999988776
No 199
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=51.26 E-value=51 Score=29.78 Aligned_cols=69 Identities=20% Similarity=0.281 Sum_probs=38.9
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc--c
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD--E 283 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~--~ 283 (396)
.||.-|+.+....++ .+.++|. .++|. |+=.+|...|.+.| .+.|||+..+.. ..+...++ +
T Consensus 4 ~vl~Sg~gsnl~ali-~~~~~~~~~~~i~~Vis~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (212)
T 1jkx_A 4 VVLISGNGSNLQAII-DACKTNKIKGTVRAVFSNKADAFGLERA---RQAGIATHTLIASAFDSREAYDRELIHEIDMYA 79 (212)
T ss_dssp EEEESSCCHHHHHHH-HHHHTTSSSSEEEEEEESCTTCHHHHHH---HHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGC
T ss_pred EEEEECCcHHHHHHH-HHHHcCCCCceEEEEEeCCCchHHHHHH---HHcCCcEEEeCcccccchhhccHHHHHHHHhcC
Confidence 456666666655555 4445553 35554 33344666665544 567999988652 33333343 5
Q ss_pred CCEEEEc
Q 016064 284 VDMVFVG 290 (396)
Q Consensus 284 vd~VlvG 290 (396)
+|.+++-
T Consensus 80 ~Dliv~a 86 (212)
T 1jkx_A 80 PDVVVLA 86 (212)
T ss_dssp CSEEEES
T ss_pred CCEEEEe
Confidence 6766663
No 200
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=51.22 E-value=42 Score=26.25 Aligned_cols=79 Identities=8% Similarity=0.011 Sum_probs=46.6
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh--
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-- 314 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-- 314 (396)
+..+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|-..+..+.+
T Consensus 6 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~~ 77 (142)
T 3cg4_A 6 HKGDVMIVDDDAHV-RIAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLDIMM--PG-----MDGWDTIRAILDNS 77 (142)
T ss_dssp CCCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEESCC--SS-----SCHHHHHHHHHHTT
T ss_pred CCCeEEEEcCCHHH-HHHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHHhhc
Confidence 45678888776543 3455677777888877666543222 22 357888886543 11 224333444433
Q ss_pred -hCCCcEEEeccc
Q 016064 315 -SMNKPVYVAAES 326 (396)
Q Consensus 315 -~~~vPvyV~aes 326 (396)
..++|+++++..
T Consensus 78 ~~~~~pii~~s~~ 90 (142)
T 3cg4_A 78 LEQGIAIVMLTAK 90 (142)
T ss_dssp CCTTEEEEEEECT
T ss_pred ccCCCCEEEEECC
Confidence 356899988754
No 201
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=51.13 E-value=33 Score=28.90 Aligned_cols=104 Identities=17% Similarity=0.038 Sum_probs=58.0
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcce
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd 292 (396)
.+||..|-|+-+-..| +.+.++| .+|+++..+|... ..+...++.+... .| ..+..+++++|.|+--|-
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 5788888877665544 4445555 5677665443210 0111233332221 12 356667788888776542
Q ss_pred eEe-ecCCeeccccHHHHHHHhhhCCCcEEEecccc
Q 016064 293 GVV-ESGGIINMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 293 ~V~-~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
... .+-.-+|-.|+..+.-+|+..+++-+|...+.
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 211 01122466789999999998888766655444
No 202
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=51.13 E-value=1.7e+02 Score=30.08 Aligned_cols=44 Identities=18% Similarity=0.097 Sum_probs=34.3
Q ss_pred cCCEEEEcceeEeecCCeeccc--cH---HHHHHHhhhCCCcEEEeccc
Q 016064 283 EVDMVFVGADGVVESGGIINMM--GT---YQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nki--GT---~~lAl~Ak~~~vPvyV~aes 326 (396)
++|..|+-|...-.+|.+.-.. +. ..+|.+||..+--|+|-++.
T Consensus 180 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~~a~aAk~~gg~VIveVn~ 228 (531)
T 2ahu_A 180 APDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQK 228 (531)
T ss_dssp CCSEEEEECSEEETTCCEECTTSSCCTTHHHHHHHHHTTTCEEEEEESE
T ss_pred CCeEEEEEcccCCCCceEEEcCcccccCHHHHHHhHhhcCCEEEEEEcC
Confidence 6899999999999999876542 22 36899999888878876543
No 203
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.09 E-value=49 Score=26.52 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=47.7
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+.- + ...|.||+..+- . ..-|.-.+..+-+ ..
T Consensus 3 ~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l--~-----~~~g~~~~~~l~~~~~ 74 (155)
T 1qkk_A 3 APSVFLIDDDRDL-RKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRM--P-----GMDGLALFRKILALDP 74 (155)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCC--S-----SSCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCC--C-----CCCHHHHHHHHHhhCC
Confidence 4578888877643 34557778888988887665433332 2 357888887542 1 1234333444433 35
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 75 ~~pii~ls~~~ 85 (155)
T 1qkk_A 75 DLPMILVTGHG 85 (155)
T ss_dssp TSCEEEEECGG
T ss_pred CCCEEEEECCC
Confidence 79999987654
No 204
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=51.08 E-value=47 Score=29.70 Aligned_cols=100 Identities=10% Similarity=0.092 Sum_probs=56.0
Q ss_pred eEEeecChHHHHHHHHHHH-HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEccee
Q 016064 218 TILVHGFSRVVMEVLKMAA-QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~-~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd~ 293 (396)
+||..|-|+.+-..|.+.. ++....+|+++..+|.. . ..|...|+.+... .| .++..++.++|.|+--|-.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-~----~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK-A----QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-C----HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh-h----hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 3677788777655554443 33124667766544432 1 2344456544322 12 4566778888888765432
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
. .+ .|-.||..+.-+|+..+++-+|...+
T Consensus 76 ~-~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 76 E-VG---QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ----------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred C-ch---HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 11 35678999999998888876665544
No 205
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=50.92 E-value=1.3e+02 Score=28.11 Aligned_cols=100 Identities=11% Similarity=-0.024 Sum_probs=53.5
Q ss_pred ceEEeecChHHHHHHHH--HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc--
Q 016064 217 CTILVHGFSRVVMEVLK--MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD-- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~--~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~-- 282 (396)
.+++|.|.+..+..+++ .....|. +|++. .|.+.+.. ..+...|.++..++- ..+-..+.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPES--GVWVS--DPTWENHV--AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTC--CEEEE--SSCCHHHH--HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCC--eEEEe--CCCchhHH--HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 56777777776666643 2223343 45544 36665543 344557888777653 23333443
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.-.++++=...--..|.+...---..++-+|+++++.+++
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEE
Confidence 2233333222222334444433334788888999988876
No 206
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=50.92 E-value=50 Score=33.67 Aligned_cols=111 Identities=22% Similarity=0.238 Sum_probs=66.8
Q ss_pred ccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCC-Cch-hHHHHHHHHhCCCCEEEEc-c----hHHHHhccc--
Q 016064 214 FDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRP-DRS-GLRLANELAKLDVPVKLLI-D----SAVAYTMDE-- 283 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP-~~e-G~~la~~L~~~GI~vtlI~-D----sav~~~m~~-- 283 (396)
..+.+||..|.++-+-..+ +...++|.. +|+++.-++ ..+ -.++..+|.+.|.+++++. | .++..++.+
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 4567788888877665544 334444532 455443322 222 3567788988898887753 3 455566644
Q ss_pred CCEEEEcceeEeecCCe-------------eccccHHHHHHHhhhC-CCcEEEeccc
Q 016064 284 VDMVFVGADGVVESGGI-------------INMMGTYQIALVAHSM-NKPVYVAAES 326 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~-~vPvyV~aes 326 (396)
+|.||-.| ++..+|.+ .|-.|+..+.-+++.. +...+|+..|
T Consensus 336 ld~VVh~A-Gv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS 391 (511)
T 2z5l_A 336 PNAVFHTA-GILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS 391 (511)
T ss_dssp CSEEEECC-CCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred CcEEEECC-cccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 88887766 33333322 2556888888777766 6677776655
No 207
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=50.12 E-value=56 Score=25.77 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=49.2
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----HHHHh-cccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----AVAYT-MDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----av~~~-m~~vd~VlvG 290 (396)
+..|+..|.+..=..+...+.+.|. +|++++..+ .-+..+.+.|..+ +..|. .+..+ +.++|.|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~--~v~~~d~~~-----~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH--EVLAVDINE-----EKVNAYASYATHA-VIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CCEEEESCH-----HHHHTTTTTCSEE-EECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCH-----HHHHHHHHhCCEE-EEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 4578888885554555555555564 566666543 1234455566643 22221 11222 5678888776
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..- .--...++..|+..+++.++
T Consensus 78 ~~~~--------~~~~~~~~~~~~~~~~~~ii 101 (144)
T 2hmt_A 78 IGAN--------IQASTLTTLLLKELDIPNIW 101 (144)
T ss_dssp CCSC--------HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCc--------hHHHHHHHHHHHHcCCCeEE
Confidence 5320 01223567778888877443
No 208
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=49.97 E-value=1.2e+02 Score=27.66 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=37.5
Q ss_pred CCCEEEEcc-----hHHHHhcccCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEeccccc
Q 016064 266 DVPVKLLID-----SAVAYTMDEVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 266 GI~vtlI~D-----sav~~~m~~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~aes~K 328 (396)
|++++.... ..+.....++|+|++|+..- |++-. -.|+..-.+ .++.++||+|+-+..+
T Consensus 100 ~~~~~~~~~~g~~~~~I~~~a~~~DliV~G~~g~---~~~~~~~~Gs~~~~v-l~~~~~PVlvv~~~~~ 164 (309)
T 3cis_A 100 PPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGS---GRWPGRLLGSVSSGL-LRHAHCPVVIIHDEDS 164 (309)
T ss_dssp CSCEEEEEESSCHHHHHHHHGGGEEEEEEESSCT---TCCTTCCSCHHHHHH-HHHCSSCEEEECTTCC
T ss_pred CceEEEEEecCCHHHHHHHHhcCCCEEEECCCCC---ccccccccCcHHHHH-HHhCCCCEEEEcCCcc
Confidence 888876432 22333347899999999752 22222 257665554 4556999999976654
No 209
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=49.96 E-value=57 Score=25.62 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=45.7
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMN 317 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~ 317 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+.- + .+.|.||+..+- .+ .-|--.+..+-+...
T Consensus 4 ~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l--~~-----~~g~~l~~~l~~~~~ 75 (136)
T 2qzj_A 4 QTKILIIDGDKDN-CQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIIL--SD-----GDGWTLCKKIRNVTT 75 (136)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESEE--TT-----EEHHHHHHHHHTTCC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHccCCC
Confidence 3567777776543 34456667777887776655433221 2 357888886542 21 124333444444458
Q ss_pred CcEEEecccc
Q 016064 318 KPVYVAAESY 327 (396)
Q Consensus 318 vPvyV~aes~ 327 (396)
+|+++++...
T Consensus 76 ~~ii~ls~~~ 85 (136)
T 2qzj_A 76 CPIVYMTYIN 85 (136)
T ss_dssp CCEEEEESCC
T ss_pred CCEEEEEcCC
Confidence 9999887543
No 210
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=49.90 E-value=85 Score=24.57 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=46.0
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCC--EEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVP--VKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH- 314 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~--vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak- 314 (396)
..+|+++|..|.. ...+...|.+.|.. |....+..-+. .+ ...|.||+..+- . ..-|.-.+..+-+
T Consensus 5 ~~~ILivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~-----~~~g~~~~~~lr~~ 76 (144)
T 3kht_A 5 SKRVLVVEDNPDD-IALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL--P-----IANGFEVMSAVRKP 76 (144)
T ss_dssp CEEEEEECCCHHH-HHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC--G-----GGCHHHHHHHHHSS
T ss_pred CCEEEEEeCCHHH-HHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC--C-----CCCHHHHHHHHHhc
Confidence 4678888876543 34456777788877 54444433222 22 457888886542 2 1234444444433
Q ss_pred --hCCCcEEEecccc
Q 016064 315 --SMNKPVYVAAESY 327 (396)
Q Consensus 315 --~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 77 ~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 77 GANQHTPIVILTDNV 91 (144)
T ss_dssp STTTTCCEEEEETTC
T ss_pred ccccCCCEEEEeCCC
Confidence 3579999988643
No 211
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=49.88 E-value=30 Score=32.78 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=41.1
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhc--ccCCEEEEcc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGA 291 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m--~~vd~VlvGA 291 (396)
+|..+|.++.....+.. . ...++|. |.+..|.....++++.+.+.|+++....|- -.++ +++|.|++..
T Consensus 4 rvgiiG~G~~~~~~~~~-l--~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 4 KICVIGSSGHFRYALEG-L--DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNW--WEMLEKEKPDILVINT 75 (337)
T ss_dssp EEEEECSSSCHHHHHTT-C--CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSH--HHHHHHHCCSEEEECS
T ss_pred EEEEEccchhHHHHHHh-c--CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCH--HHHhcCCCCCEEEEeC
Confidence 45555643333323322 2 4457776 677766445667777777889876666653 2333 5799999864
No 212
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=49.88 E-value=38 Score=30.81 Aligned_cols=69 Identities=16% Similarity=0.302 Sum_probs=39.5
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcc-----hHHHHhc--ccCCEEE
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLID-----SAVAYTM--DEVDMVF 288 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~D-----sav~~~m--~~vd~Vl 288 (396)
.||.-|..+....+|. +.++|. ..+|. |.=.+|...|.+.| .+.|||+..+.. ..+...+ -++|.++
T Consensus 12 ~vl~SG~gsnl~all~-~~~~~~~~~~I~~Vis~~~~a~~l~~A---~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dliv 87 (215)
T 3kcq_A 12 GVLISGRGSNLEALAK-AFSTEESSVVISCVISNNAEARGLLIA---QSYGIPTFVVKRKPLDIEHISTVLREHDVDLVC 87 (215)
T ss_dssp EEEESSCCHHHHHHHH-HTCCC-CSEEEEEEEESCTTCTHHHHH---HHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCcHHHHHHHH-HHHcCCCCcEEEEEEeCCcchHHHHHH---HHcCCCEEEeCcccCChHHHHHHHHHhCCCEEE
Confidence 4555566666555554 444443 45655 33347777775544 467999998642 3444444 2467666
Q ss_pred Ec
Q 016064 289 VG 290 (396)
Q Consensus 289 vG 290 (396)
+-
T Consensus 88 la 89 (215)
T 3kcq_A 88 LA 89 (215)
T ss_dssp ES
T ss_pred Ee
Confidence 53
No 213
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=49.85 E-value=8.3 Score=36.18 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=55.6
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccccccccc-ccC-CCCCCCCCccc-CCCCCcCCCCccccccc
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARL-YPL-DQKDMGPALRP-IDFGVPIPSKVEVETSA 363 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~-~p~-~~~d~~~~~~~-~~~~~~~~~~~~v~np~ 363 (396)
...|||+|+-+++....---..+.-.|++.|.-++|.+.+..=..+ ..+ +..-++...+. ..|+. +++...-+
T Consensus 120 ~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~----d~~~~~~l 195 (251)
T 1i4n_A 120 SSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEI----KKNVLWEL 195 (251)
T ss_dssp HHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCB----CTTHHHHH
T ss_pred HHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCC----CHHHHHHH
Confidence 3468999999888777644455566788999999998865431110 111 10000000000 00111 12221223
Q ss_pred eeccCCCCccEEEeCCCCCCCchHHHHH
Q 016064 364 RDYTPPQYLTLLFTDLGVLTPSVVSDEL 391 (396)
Q Consensus 364 fD~tPpelIt~iITE~Gv~~Ps~v~~~L 391 (396)
...+|++ ..+|+|-|+.+|+.+.+..
T Consensus 196 ~~~ip~~--~~vIaEsGI~t~edv~~~~ 221 (251)
T 1i4n_A 196 LPLVPDD--TVVVAESGIKDPRELKDLR 221 (251)
T ss_dssp GGGSCTT--SEEEEESCCCCGGGHHHHT
T ss_pred HHhCCCC--CEEEEeCCCCCHHHHHHHH
Confidence 4456766 3689999999999988753
No 214
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=49.79 E-value=84 Score=29.98 Aligned_cols=97 Identities=10% Similarity=0.027 Sum_probs=54.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HHHHH-HhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LANEL-AKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la~~L-~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++-+.+..+..+++.+.+.| -+|++.+ |.+.|.. ..+.+ ...|+++..+.. ..+...+. +...|++.
T Consensus 82 ~~i~~~sG~~a~~~~l~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 157 (398)
T 1gc0_A 82 AGLALASGMGAITSTLWTLLRPG--DEVLLGN--TLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFE 157 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEES--SCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHhcCC--CEEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEE
Confidence 56666565655555555554334 3566553 4455533 34343 567999988863 23333443 34444442
Q ss_pred ceeEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+.. .|.+. . -..++-+|++++++++|
T Consensus 158 --~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 185 (398)
T 1gc0_A 158 --SPANPNMHMA-D--IAGVAKIARKHGATVVV 185 (398)
T ss_dssp --SSCTTTCCCC-C--HHHHHHHHGGGTCEEEE
T ss_pred --CCCCCCcccc-c--HHHHHHHHHHcCCEEEE
Confidence 2222 34444 2 35678889999998876
No 215
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=49.75 E-value=72 Score=23.83 Aligned_cols=77 Identities=9% Similarity=0.114 Sum_probs=44.2
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.|++..+- .+ .-|--.+..+.+...+|
T Consensus 3 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~~ 74 (120)
T 2a9o_A 3 KILIVDDEKPI-SDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLML--PE-----IDGLEVAKTIRKTSSVP 74 (120)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEECSSC--SS-----SCHHHHHHHHHHHCCCC
T ss_pred eEEEEcCCHHH-HHHHHHHHHhcCcEEEEecCHHHHHHHHHhCCCCEEEEeccC--CC-----CCHHHHHHHHHhCCCCC
Confidence 56677766542 3344566777788777665533222 12 357888886542 22 12433344444457899
Q ss_pred EEEecccc
Q 016064 320 VYVAAESY 327 (396)
Q Consensus 320 vyV~aes~ 327 (396)
+++++...
T Consensus 75 ii~~s~~~ 82 (120)
T 2a9o_A 75 ILMLSAKD 82 (120)
T ss_dssp EEEEESCC
T ss_pred EEEEecCC
Confidence 99987543
No 216
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=49.45 E-value=51 Score=25.07 Aligned_cols=78 Identities=14% Similarity=0.040 Sum_probs=46.0
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS--- 315 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~--- 315 (396)
.+|+++|..|.. ...+...|.+.|..|....+..-+.- + ...|.|++..+ +.+ .-|...+..+-+.
T Consensus 3 ~~ilivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~D~~--l~~-----~~g~~~~~~l~~~~~~ 74 (127)
T 2jba_A 3 RRILVVEDEAPI-REMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLAWM--LPG-----GSGIQFIKHLRRESMT 74 (127)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHTTCSSSCCSEEEEESE--ETT-----EEHHHHHHHHHTSTTT
T ss_pred cEEEEEcCCHHH-HHHHHHHHHHCCceEEEeCCHHHHHHHHhccCCCEEEEecC--CCC-----CCHHHHHHHHHhCccc
Confidence 367777776643 34556677778888776665433332 2 35788887643 222 1344444444433
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 75 ~~~~ii~~s~~~ 86 (127)
T 2jba_A 75 RDIPVVMLTARG 86 (127)
T ss_dssp TTSCEEEEEETT
T ss_pred CCCCEEEEeCCC
Confidence 479999987643
No 217
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=49.43 E-value=1.3e+02 Score=28.27 Aligned_cols=105 Identities=17% Similarity=0.165 Sum_probs=51.0
Q ss_pred ccccCceEEeecChHHHHHHHHHHHH------CCCeeEEEEeCCCCCchhHHH-HHHHHhCCCC------------EEEE
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMAAQ------NKKLFRVLCTEGRPDRSGLRL-ANELAKLDVP------------VKLL 272 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A~~------~gk~f~ViV~EsrP~~eG~~l-a~~L~~~GI~------------vtlI 272 (396)
++....+++|.|.+..+..+++.+.. .|+ -+|++.+ |.+.|... +-.+ .|.+ +..+
T Consensus 94 ~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~-~~vi~~~--~~yh~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~ 168 (397)
T 2ord_A 94 NTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKK-YRILSAH--NSFHGRTLGSLTA--TGQPKYQKPFEPLVPGFEYF 168 (397)
T ss_dssp TTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEB--TCCCCSSHHHHHH--SBCHHHHGGGCSCCTTEEEE
T ss_pred hcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCC-ceEEEEc--CCcCCCchhhhhc--cCChhhccccCCCCCCeeEe
Confidence 34345677777777777766665542 233 2566665 23323222 2222 2322 5555
Q ss_pred c--c-hHHHHhcc-cCCEEEEcceeEeecCC-eeccccHHHHHHHhhhCCCcEEE
Q 016064 273 I--D-SAVAYTMD-EVDMVFVGADGVVESGG-IINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 273 ~--D-sav~~~m~-~vd~VlvGAd~V~~NG~-v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+ | ..+...+. ++.+|++-. --...|. +..+-=-..++-+|+++++++++
T Consensus 169 ~~~d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~l~~l~~~~~~~li~ 222 (397)
T 2ord_A 169 EFNNVEDLRRKMSEDVCAVFLEP-IQGESGIVPATKEFLEEARKLCDEYDALLVF 222 (397)
T ss_dssp CTTCHHHHHHHCCTTEEEEEECS-EECTTTCEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCHHHHHHHhhcCeEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3 2 23434443 333444322 1111233 22222235677788999998876
No 218
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=49.27 E-value=1.4e+02 Score=28.96 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=68.5
Q ss_pred CceEEeecChHHHHHHHHHHHHCC-CeeEEE----EeCCCCCch------------hHHHHHHHHhC--CCCEEEEcc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNK-KLFRVL----CTEGRPDRS------------GLRLANELAKL--DVPVKLLID-- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~g-k~f~Vi----V~EsrP~~e------------G~~la~~L~~~--GI~vtlI~D-- 274 (396)
+.+||..|-++.=-.+++.....| +++.++ |..|....| ...+++.|.+. +++++.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i 113 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 113 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 578999999887666666666667 445554 222333222 23456677764 466666542
Q ss_pred -----------------hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccc
Q 016064 275 -----------------SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR 331 (396)
Q Consensus 275 -----------------sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~ 331 (396)
..+..++++.|.|+.+.|..- .-+.+.-+|..+++|++-.+ ..|..
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~---------tR~lin~~c~~~~~plI~aa--~G~~G 176 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE---------SRWLPSLLSNIENKTVINAA--LGFDS 176 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG---------GGHHHHHHHHHTTCEEEEEE--ECSSE
T ss_pred cccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH---------HHHHHHHHHHHcCCcEEEee--ecceE
Confidence 124556789999999887543 34788889999999998754 55544
No 219
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=49.10 E-value=24 Score=31.70 Aligned_cols=88 Identities=20% Similarity=0.156 Sum_probs=53.5
Q ss_pred cChHHHHHHHHHHHHCCCeeEEE---EeCC-CCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEee-c
Q 016064 223 GFSRVVMEVLKMAAQNKKLFRVL---CTEG-RPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVE-S 297 (396)
Q Consensus 223 ~~S~~V~~~L~~A~~~gk~f~Vi---V~Es-rP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~-N 297 (396)
|.|..=.++|.. -|-.|+|+ +.|+ .|...-..++.+|+..+- .+++.-++ -+ +++|||.|.. |
T Consensus 9 S~SPrR~eLL~~---~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA-------~av~~~~~-~~-~VigaDTvV~~~ 76 (189)
T 1ex2_A 9 SQSPRRKELLDL---LQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKA-------KAVADLHP-HA-IVIGADTMVCLD 76 (189)
T ss_dssp CCCHHHHHHHHT---TCCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHH-------HHHHHHCT-TS-EEEEEEEEEEET
T ss_pred CCCHHHHHHHHh---CCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHH-------HHHHHHcC-CC-eEEEeCeEEEEC
Confidence 444443445544 38899988 4455 233334567777776541 11222221 23 8999999987 9
Q ss_pred CCeeccccHHHHH--HHhhhCCCcEEE
Q 016064 298 GGIINMMGTYQIA--LVAHSMNKPVYV 322 (396)
Q Consensus 298 G~v~nkiGT~~lA--l~Ak~~~vPvyV 322 (396)
|.++.|-.+..-| ++.+-.|...-|
T Consensus 77 g~ilgKP~~~~eA~~mL~~lsG~~h~v 103 (189)
T 1ex2_A 77 GECLGKPQDQEEAASMLRRLSGRSHSV 103 (189)
T ss_dssp TEEECCCSSHHHHHHHHHHHTTSEEEE
T ss_pred CEEcCCCCCHHHHHHHHHHhCCCcEEE
Confidence 9999999998766 444545555444
No 220
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=49.07 E-value=35 Score=27.26 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=41.7
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh--
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-- 314 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-- 314 (396)
+..+|+|+|..|.. ...+...|.+.|..|....+..-+. .+ ...|.||+..+ +.+ .-|.-.+..+-+
T Consensus 13 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--mp~-----~~g~~~~~~lr~~~ 84 (143)
T 3m6m_D 13 RSMRMLVADDHEAN-RMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--MPG-----MNGLDMLKQLRVMQ 84 (143)
T ss_dssp --CEEEEECSSHHH-HHHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEEESC--CSS-----SCHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHH-HHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEeCC--CCC-----CCHHHHHHHHHhch
Confidence 45678888776543 3344566777787777665543222 12 46788888543 232 123333333321
Q ss_pred ---hCCCcEEEeccc
Q 016064 315 ---SMNKPVYVAAES 326 (396)
Q Consensus 315 ---~~~vPvyV~aes 326 (396)
...+|+++++..
T Consensus 85 ~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 85 ASGMRYTPVVVLSAD 99 (143)
T ss_dssp HTTCCCCCEEEEESC
T ss_pred hccCCCCeEEEEeCC
Confidence 145899998764
No 221
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=49.01 E-value=43 Score=32.64 Aligned_cols=96 Identities=10% Similarity=0.036 Sum_probs=51.9
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HH-HH-HHhCCCCEEEEcch---HHHHhcc-cCCEEEE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LA-NE-LAKLDVPVKLLIDS---AVAYTMD-EVDMVFV 289 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la-~~-L~~~GI~vtlI~Ds---av~~~m~-~vd~Vlv 289 (396)
+.+++-|.+..+.. +....+.|. +|++.+ |.+.|.. +. .. +...|+++..+.-. ++...+. ++.+|++
T Consensus 84 ~~~~~~sG~~Ai~~-~~~l~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~ 158 (400)
T 3nmy_A 84 RAFAFASGMAATST-VMELLDAGS--HVVAMD--DLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWI 158 (400)
T ss_dssp EEEEESSHHHHHHH-HHTTSCTTC--EEEEES--SCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEE
T ss_pred CEEEecCHHHHHHH-HHHHcCCCC--EEEEeC--CCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEE
Confidence 45555544555544 333333343 566543 5554432 23 33 56679999888732 3334443 3444444
Q ss_pred cceeEee-cCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 290 GADGVVE-SGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 290 GAd~V~~-NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+.. .|.+. . -..++-+|++++++++|
T Consensus 159 --e~~~np~G~~~-~--l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 159 --ETPTNPMLKLV-D--IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp --ESSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred --ECCCCCCCeee-c--HHHHHHHHHHcCCEEEE
Confidence 33333 24333 2 45688889999999887
No 222
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=48.78 E-value=1.1e+02 Score=28.86 Aligned_cols=101 Identities=8% Similarity=-0.032 Sum_probs=50.5
Q ss_pred cCceEE--eecChHHHHHHHHHHH---HCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----------HHHH
Q 016064 215 DGCTIL--VHGFSRVVMEVLKMAA---QNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----------AVAY 279 (396)
Q Consensus 215 dg~~IL--T~~~S~~V~~~L~~A~---~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----------av~~ 279 (396)
.+.+++ |.|.+..+..++.... +.|. +|++.+ |.+.+.. ..+...|.++..++-. .+..
T Consensus 94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd--~Vlv~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 167 (401)
T 7aat_A 94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSR--DVYLPK--PSWGNHT--PIFRDAGLQLQAYRYYDPKTCSLDFTGAME 167 (401)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCC--EEEEEE--SCCTTHH--HHHHHTTCEEEEEECEETTTTEECHHHHHH
T ss_pred cCceEEEecCcchHHHHHHHHHHHHhccCCC--EEEEcC--CCchhHH--HHHHHcCCeeEeeeeeccccCccCHHHHHH
Confidence 455655 7777776655443332 3243 566543 6655543 3344568877776521 1112
Q ss_pred hccc----CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 280 TMDE----VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 280 ~m~~----vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+.+ ...|++. ..=-+.|.++..-==..++-+|+++++.+++
T Consensus 168 ~l~~~~~~~~~v~i~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 168 DISKIPEKSIILLHA-CAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp HHTTSCTTCEEEEES-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhCCCCcEEEEeC-CCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 2322 2222222 1111223333333345677889999987766
No 223
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=48.74 E-value=20 Score=31.75 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=36.7
Q ss_pred eEEeecC-hHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc
Q 016064 218 TILVHGF-SRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 218 ~ILT~~~-S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D 274 (396)
.|.+|.. +..+...|..|+++|.+++|++........+ .....|.+.||+|.....
T Consensus 63 ~i~~y~~~~~~i~~aL~~aa~rGV~Vrii~D~~~~~~~~-~~~~~l~~~gi~v~~~~~ 119 (196)
T 4ggj_A 63 ELCLFAFSSPQLGRAVQLLHQRGVRVRVITDCDYMALNG-SQIGLLRKAGIQVRHDQD 119 (196)
T ss_dssp EEEESCBCCHHHHHHHHHHHHTTCEEEEEESSCCC---C-CHHHHHHHTTCEEEECCS
T ss_pred EEEEEEeCCHHHHHHHHHHHHcCCcEEEEEecccccccH-HHHHHHHhcCCCcccccc
Confidence 3444543 3457888999999999999987543322222 235778999999876543
No 224
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=48.73 E-value=89 Score=29.79 Aligned_cols=99 Identities=8% Similarity=0.043 Sum_probs=54.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc------------------hHHH
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID------------------SAVA 278 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D------------------sav~ 278 (396)
.+++|.|.+..+..+++.+...| -+|++.+ |.+.|... .+...|.++..++. ..+-
T Consensus 103 ~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 176 (429)
T 1yiz_A 103 EVLVTVGAYEALYATIQGHVDEG--DEVIIIE--PFFDCYEP--MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELE 176 (429)
T ss_dssp SEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHH
T ss_pred CEEEecChHHHHHHHHHHhcCCC--CEEEEcC--CCchhHHH--HHHHcCCEEEEEeCCcccccccccccCcccCHHHHH
Confidence 67777777777776666654334 3566554 55655443 34456887776652 1222
Q ss_pred Hhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 279 YTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 279 ~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..+ +++..|++. ..-...|.+..+-=-..++-+|+++++.+++
T Consensus 177 ~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 177 ALFNEKTKMIIIN-TPHNPLGKVMDRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhccCceEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 333 234445442 2112234444322234567788999998776
No 225
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.71 E-value=47 Score=33.34 Aligned_cols=96 Identities=11% Similarity=0.006 Sum_probs=55.9
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
.|..||..|...+..+-++...+.|-++.|+ +..... .+ ..|.+.| .++++...--...+..+|.|+...+-=
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi--~~~~~~---~~-~~l~~~~-~i~~~~~~~~~~~l~~~~lVi~at~~~ 83 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVN--ALTFIP---QF-TVWANEG-MLTLVEGPFDETLLDSCWLAIAATDDD 83 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEE--ESSCCH---HH-HHHHTTT-SCEEEESSCCGGGGTTCSEEEECCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEE--cCCCCH---HH-HHHHhcC-CEEEEECCCCccccCCccEEEEcCCCH
Confidence 4789999999999888888877778655555 333222 22 3444322 234443221111234566665533210
Q ss_pred eecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 295 VESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 295 ~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
-+ ...++..|+..++||-|+.+.
T Consensus 84 -----~~----n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 84 -----TV----NQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp -----HH----HHHHHHHHHHTTCEEEETTCT
T ss_pred -----HH----HHHHHHHHHHcCCEEEECCCc
Confidence 02 357888999999998776654
No 226
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=48.70 E-value=90 Score=29.84 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=57.5
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----------c-hHHHHhcc-
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----------D-SAVAYTMD- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----------D-sav~~~m~- 282 (396)
...+++|-|.+..+..+++.+. ++.-+|++.+ |.+.|... .+...|.++..++ | ..+-..+.
T Consensus 119 ~~~v~~~~g~~ea~~~a~~~~~--~~gd~Vi~~~--~~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 119 KEDILFIDGVVPAISIALQAFS--EKGDAVLINS--PVYYPFAR--TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp GGGEEEESCHHHHHHHHHHHHS--CTEEEEEEEE--SCCHHHHH--HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHHEEEcCCHHHHHHHHHHHhc--CCCCEEEECC--CCcHHHHH--HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 3456777666666776776653 3334566543 56666443 3344576665554 2 23444443
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...--+.|.+..+--=..++-+|+++++.+++
T Consensus 193 ~~~~~vil-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 193 NNVKIYLL-CSPHNPGGRVWDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 5555555 22223345444444556678889999998876
No 227
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=48.47 E-value=67 Score=30.46 Aligned_cols=101 Identities=11% Similarity=0.001 Sum_probs=53.1
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCC-EEEEcchHH-HHh--c---ccCCE
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVP-VKLLIDSAV-AYT--M---DEVDM 286 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~-vtlI~Dsav-~~~--m---~~vd~ 286 (396)
....+++|-|.+..+.. +..+...| -+|++.+ |.+.|... .+...|.+ +..++...- .+. + +++..
T Consensus 94 ~~~~v~~~~G~~~al~~-~~~~~~~g--d~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 166 (400)
T 3asa_A 94 DAKEIFISDGAKVDLFR-LLSFFGPN--QTVAIQD--PSYPAYLD--IARLTGAKEIIALPCLQENAFFPEFPEDTHIDI 166 (400)
T ss_dssp CGGGEEEESCHHHHHHH-HHHHHCSS--CEEEEEE--SCCHHHHH--HHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSE
T ss_pred CHHHEEEccChHHHHHH-HHHHcCCC--CEEEECC--CCcHHHHH--HHHHcCCcceEecccchhcCcccChhhccCccE
Confidence 34467777775555554 44444434 3566543 66666543 34557888 777753211 111 1 34555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++. ..-.+.|.+...--=..++-+|+++++.+++
T Consensus 167 v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 167 LCLC-SPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp EEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEe-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 5553 2212234444322223467778999987765
No 228
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=48.37 E-value=1.1e+02 Score=28.19 Aligned_cols=100 Identities=17% Similarity=0.135 Sum_probs=56.0
Q ss_pred cCceEEeecChHHHHHHHHHHHHC-----------CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------h
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQN-----------KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------S 275 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~-----------gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------s 275 (396)
...+++|.|.+..+..++..+... ++.-+|++.+ |.+.+..- .+...|+++..++- .
T Consensus 86 ~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~d~~ 161 (397)
T 3f9t_A 86 DAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI--TAHFSFEK--GREMMDLEYIYAPIKEDYTIDEK 161 (397)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET--TCCTHHHH--HHHHHTCEEEEECBCTTSSBCHH
T ss_pred CCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC--cchhHHHH--HHHHcCceeEEEeeCCCCcCCHH
Confidence 345677777777776666665443 1234666554 44444332 33334888887762 2
Q ss_pred HHHHhcc--cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 276 AVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 276 av~~~m~--~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+-..+. +..+|++-. .-...|.+.. -..++-+|+++++++++
T Consensus 162 ~l~~~i~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 162 FVKDAVEDYDVDGIIGIA-GTTELGTIDN---IEELSKIAKENNIYIHV 206 (397)
T ss_dssp HHHHHHHHSCCCEEEEEB-SCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhhcCCeEEEEEC-CCCCCCCCCC---HHHHHHHHHHhCCeEEE
Confidence 3333443 455555432 2233444432 34578889999998877
No 229
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=48.10 E-value=25 Score=31.91 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=47.4
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-hHHHHhcc--cCCEEEEcce
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-SAVAYTMD--EVDMVFVGAD 292 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-sav~~~m~--~vd~VlvGAd 292 (396)
-.+||..|.++-+-.-|.+...+ +..+|+++..++. - +.| .++..++. ++|.||--|-
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~-----------------D-l~d~~~~~~~~~~~~~d~vih~A~ 72 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKG-KNVEVIPTDVQDL-----------------D-ITNVLAVNKFFNEKKPNVVINCAA 72 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTT-SSEEEEEECTTTC-----------------C-TTCHHHHHHHHHHHCCSEEEECCC
T ss_pred cceEEEECCCChHHHHHHHHHHh-CCCeEEeccCccC-----------------C-CCCHHHHHHHHHhcCCCEEEECCc
Confidence 35666667766655544433321 2256666543210 0 012 23444455 5676665442
Q ss_pred eEeec--------CCeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 293 GVVES--------GGIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 293 ~V~~N--------G~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
....+ ---+|-.||..+.-+|+..++.|+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS 113 (292)
T 1vl0_A 73 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQIST 113 (292)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEech
Confidence 21100 0123567899999999888886555543
No 230
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=47.96 E-value=80 Score=29.48 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=52.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch-----------HHHHhc-cc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS-----------AVAYTM-DE 283 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds-----------av~~~m-~~ 283 (396)
+.+++|.|.+..+..++..+.+.| -+|++.+ |.+.|.. ..+...|.++..++.. .+-..+ ++
T Consensus 79 ~~v~~~~g~~~a~~~~~~~~~~~g--d~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 79 ESVVVTSGATEALYVLLQSLVGPG--DEVVVLE--PFFDVYL--PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT
T ss_pred hhEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHH--HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC
Confidence 357777777777776666654334 3566554 4444443 2345678877766532 222222 23
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++. ..-...|.++..-=-..++-+|+++++.+++
T Consensus 153 ~~~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 153 TRALLLN-TPMNPTGLVFGERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3344432 1111224333321124577788999998876
No 231
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=47.90 E-value=38 Score=31.30 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=52.4
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhc---cc
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTM---DE 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m---~~ 283 (396)
...+++|-|.+..+..++....+.| -+|++.+ |.+.+.. ..+...|.++..++. ..+-..+ ++
T Consensus 68 ~~~i~~~~g~~~a~~~~~~~l~~~g--d~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 141 (354)
T 3ly1_A 68 APSILLTAGSSEGIRAAIEAYASLE--AQLVIPE--LTYGDGE--HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSG 141 (354)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEES--SSCTHHH--HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSS
T ss_pred hHHEEEeCChHHHHHHHHHHHhCCC--CeEEECC--CCchHHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCC
Confidence 3467777776666666665543334 3566554 5555543 345567888888763 2344444 35
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhh--CCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHS--MNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~--~~vPvyV 322 (396)
...|++ ...-...|.+...- .+.-+++. +++.+++
T Consensus 142 ~~~v~l-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 178 (354)
T 3ly1_A 142 PSIVYL-VNPNNPTGTITPAD---VIEPWIASKPANTMFIV 178 (354)
T ss_dssp CEEEEE-ESSCTTTCCCCCHH---HHHHHHHTCCTTEEEEE
T ss_pred CCEEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCeEEEE
Confidence 666665 22222234444333 24444444 7766665
No 232
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=47.56 E-value=17 Score=33.29 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=20.2
Q ss_pred ccccHHHHHHHhhhCCCcEEEeccc
Q 016064 302 NMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 302 nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-.||..+.-+|+..+++-+|.+.+
T Consensus 95 n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 95 NVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEecC
Confidence 6779999999999999877776554
No 233
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=47.55 E-value=42 Score=29.22 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=62.6
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEc
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVG 290 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvG 290 (396)
.+.+||..|-|+.+-..| +.+.++|...+|+++..+|. .+ ..+ ..++.+... .| .++..++.++|.||--
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~----~~-~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ----GK-EKI-GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH----HH-HHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC----ch-hhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 356788888877765544 44455533467777654431 11 222 334543321 22 4566778889988876
Q ss_pred ceeEeecC-----------C----------eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 291 ADGVVESG-----------G----------IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 291 Ad~V~~NG-----------~----------v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-.....+ . -+|-.|+..++-+|+..+++-+|...+
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 53321111 0 256789999999998888876665443
No 234
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=47.45 E-value=22 Score=33.41 Aligned_cols=98 Identities=11% Similarity=-0.048 Sum_probs=51.3
Q ss_pred cccCceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HHHHhcc
Q 016064 213 IFDGCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AVAYTMD 282 (396)
Q Consensus 213 I~dg~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av~~~m~ 282 (396)
+.....|+|-|.+..+..+|..+ .+.| -+|++.+ |.+.+... .+...|.++..+... .+...+.
T Consensus 49 ~~~~~~i~~~sgt~al~~~l~~l~~~~g--d~Vi~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~ 122 (373)
T 3frk_A 49 CNVNYCIGCGNGLDALHLILKGYDIGFG--DEVIVPS--NTFIATAL--AVSYTGAKPIFVEPDIRTYNIDPSLIESAIT 122 (373)
T ss_dssp HTSSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEET--TSCTHHHH--HHHHHSCEEEEECEETTTTEECGGGTGGGCC
T ss_pred hCCCeEEEeCCHHHHHHHHHHHcCCCCc--CEEEECC--CCcHHHHH--HHHHcCCEEEEEeccccccCcCHHHHHHhcC
Confidence 33346777766666666566544 3223 3566543 44545333 345568877776522 2222232
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+-.++++ ..-..|.+. . -..++-+|+++++++++
T Consensus 123 ~~~~~v~---~~n~~G~~~-~--l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 123 EKTKAII---AVHLYGQPA-D--MDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp TTEEEEE---EECCTTCCC-C--HHHHHHHHHHHTCEEEE
T ss_pred CCCeEEE---EECCCcCcc-c--HHHHHHHHHHcCCEEEE
Confidence 2223333 112234321 1 24678889999998887
No 235
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=47.39 E-value=82 Score=29.47 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=54.6
Q ss_pred ccCc-eEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc
Q 016064 214 FDGC-TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD 282 (396)
Q Consensus 214 ~dg~-~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~ 282 (396)
.... +++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|+++..++. ..+-..+.
T Consensus 85 ~~~~~v~~~~g~~~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 85 DPKTEIMVLLGANQAFLMGLSAFLKDG--EEVLIPT--PAFVSYAP--AVILAGGKPVEVPTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp CTTTSEEEESSTTHHHHHHHTTTCCTT--CEEEEEE--SCCTTHHH--HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC
T ss_pred CCCCeEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHH--HHHHCCCEEEEeccCCccCCCCCHHHHHHhcC
Confidence 3456 8888888887777765553333 3566553 44555433 23446777777652 12222332
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++ ...-...|.++..-=-..++-+|+++++++++
T Consensus 159 ~~~~~v~~-~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 159 DKTRALII-NSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp TTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3333443 11111234443322234567788999998876
No 236
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=47.32 E-value=16 Score=36.41 Aligned_cols=61 Identities=21% Similarity=0.304 Sum_probs=40.0
Q ss_pred hhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccccc
Q 016064 254 SGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~K 328 (396)
.|.++.-++.. +-..++.+|.||.|==++-. ..+.---...+|-.||+++|||+++|.+..
T Consensus 270 ~Gi~~v~~~~~------------l~~~l~~ADLVITGEG~~D~--Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 270 RGIEIVTDALH------------LEACLADADLVITGEGRIDS--QTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp CHHHHHHHHTT------------HHHHHHHCSEEEECCEESCC------CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred cHHHHHHHHhC------------hHhhhcCCCEEEECCCCCcC--cCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 46666555532 45567899999999744322 122222235678889999999999998764
No 237
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=47.14 E-value=30 Score=30.93 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=64.4
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------c
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM-------D 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m-------~ 282 (396)
+.++|..|-|+-+-..+ +...++| .+|+++..++......+++++.+.|.++..+. | ..+..++ +
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEG--YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56777777766554433 3344445 57777776666666777888888888876653 2 2333333 3
Q ss_pred cCCEEEEcceeEeecCCe-------------eccccHHHHHHHh----hhCCCcEEEec
Q 016064 283 EVDMVFVGADGVVESGGI-------------INMMGTYQIALVA----HSMNKPVYVAA 324 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~A----k~~~vPvyV~a 324 (396)
++|.++--|- +...+.+ +|-.|++.+.-.+ +..+...+|..
T Consensus 82 ~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i 139 (246)
T 3osu_A 82 SLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINL 139 (246)
T ss_dssp CCCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 7888777663 3332321 3677888887776 44455555543
No 238
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=46.95 E-value=51 Score=28.56 Aligned_cols=73 Identities=14% Similarity=0.156 Sum_probs=49.4
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEcc------hHHHHhc--ccCCEEEEcceeEeecCCeeccccHHHHHH
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLID------SAVAYTM--DEVDMVFVGADGVVESGGIINMMGTYQIAL 311 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~D------sav~~~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl 311 (396)
.|+++.+++ .++.|.+ .||+|+.+.- ..++..+ +++|+||-=.|-. |.--...-.+.+--
T Consensus 39 Gf~l~AT~g--------Ta~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVInt~~pl---~~~~h~~D~~~IrR 107 (152)
T 1b93_A 39 QHVLYATGT--------TGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPL---NAVPHDPDVKALLR 107 (152)
T ss_dssp TSEEEEETT--------HHHHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEEECCTT---SCCTTHHHHHHHHH
T ss_pred CCEEEEccH--------HHHHHHHHhCceeEEEEecCCCCCchHHHHHHCCCccEEEEcCCcc---cCCcccccHHHHHH
Confidence 588888876 4566777 8999988742 2355555 6899998744300 32222445678888
Q ss_pred HhhhCCCcEEEec
Q 016064 312 VAHSMNKPVYVAA 324 (396)
Q Consensus 312 ~Ak~~~vPvyV~a 324 (396)
+|-.++||++---
T Consensus 108 ~A~~~~IP~~T~l 120 (152)
T 1b93_A 108 LATVWNIPVATNV 120 (152)
T ss_dssp HHHHTTCCEESSH
T ss_pred HHHHcCCCEEeCH
Confidence 9999999997543
No 239
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=46.90 E-value=72 Score=25.00 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=46.9
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEc--chH-HHH-hcccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLI--DSA-VAY-TMDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~--Dsa-v~~-~m~~vd~VlvG 290 (396)
+..|+.+|.+..-..+...+.+.| .+|++.+..|. .+..+.+ .|+.+.... +.. +.. .+.++|.|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~-----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKD-----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHH-----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHH-----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 356778888665455555555555 46777766442 2334443 466543211 111 111 25788998887
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCcE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKPV 320 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vPv 320 (396)
...- -. ...++.+|+.++..-
T Consensus 77 ~~~~-----~~----~~~~~~~~~~~~~~~ 97 (140)
T 1lss_A 77 TGKE-----EV----NLMSSLLAKSYGINK 97 (140)
T ss_dssp CSCH-----HH----HHHHHHHHHHTTCCC
T ss_pred eCCc-----hH----HHHHHHHHHHcCCCE
Confidence 5321 11 134566777777543
No 240
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=46.90 E-value=97 Score=29.12 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=53.5
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hHHHHhcc-----cCCEE
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SAVAYTMD-----EVDMV 287 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sav~~~m~-----~vd~V 287 (396)
..+++|-|.+..+..++..+...| -+|++. .|.+.+... .+...|.++..++. ..+-..+. ++..|
T Consensus 104 ~~v~~~~ggt~a~~~~~~~~~~~g--d~V~~~--~p~~~~~~~--~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v 177 (398)
T 3a2b_A 104 EAAILFSTGFQSNLGPLSCLMGRN--DYILLD--ERDHASIID--GSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLI 177 (398)
T ss_dssp SEEEEESSHHHHHHHHHHHSSCTT--CEEEEE--TTCCHHHHH--HHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEE
T ss_pred CcEEEECCHHHHHHHHHHHHhCCC--CEEEEC--CccCHHHHH--HHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEE
Confidence 357777777766666665543333 345544 355544433 34557888777752 23344443 34444
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++.. .-...|.+.. -..++-+|+++++++++
T Consensus 178 ~~~~-~~nptG~~~~---~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 178 CTDG-IFSMEGDIVN---LPELTSIANEFDAAVMV 208 (398)
T ss_dssp EEES-BCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred EEeC-CCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 4322 1122344443 36778889999988776
No 241
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=46.83 E-value=1.1e+02 Score=28.69 Aligned_cols=103 Identities=6% Similarity=-0.022 Sum_probs=57.1
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HHHHhc-cc
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AVAYTM-DE 283 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av~~~m-~~ 283 (396)
....+++|.|.+..+..++..+.+.|+ -+|++.+ |.+.|.. ..+...|.++..++.. .+...+ ++
T Consensus 98 ~~~~i~~~~g~~~al~~~~~~l~~~g~-d~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~ 172 (398)
T 3ele_A 98 NADNLYMTMGAAASLSICFRALTSDAY-DEFITIA--PYFPEYK--VFVNAAGARLVEVPADTEHFQIDFDALEERINAH 172 (398)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCSTT-CEEEEES--SCCTHHH--HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT
T ss_pred ChHHEEEccCHHHHHHHHHHHHcCCCC-CEEEEeC--CCchhhH--HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC
Confidence 445677777777777666666544441 3555543 4555543 3345678888877622 233333 34
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhh------CCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHS------MNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~------~~vPvyV 322 (396)
+..|++- .---+.|.++..---..++-+|++ +++.+++
T Consensus 173 ~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 173 TRGVIIN-SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp EEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 4455542 222334555554444556667777 8887776
No 242
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=46.72 E-value=1.5e+02 Score=28.34 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=53.7
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHH-HH-HHHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-AN-ELAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~l-a~-~L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++-|.+..+..++....+.| -+|++. .|.+.+..- .. .+...|+++..++. ..+...+. ++..|++.
T Consensus 79 ~~i~~~~g~~ai~~~~~~l~~~g--d~Vl~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~ 154 (404)
T 1e5e_A 79 ACVATSSGMGAIAATVLTILKAG--DHLISD--ECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFE 154 (404)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEE
T ss_pred cEEEeCChHHHHHHHHHHHhCCC--CEEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEE
Confidence 56666655554444444433334 356654 455555322 22 46678999988863 34444443 33344432
Q ss_pred ceeEeecCCeeccccHHHHHHHhhh-CCCcEEE
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHS-MNKPVYV 322 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~-~~vPvyV 322 (396)
.---..|.+.. -..++-+|++ +++++++
T Consensus 155 -~p~NptG~v~~---l~~i~~la~~~~~~~li~ 183 (404)
T 1e5e_A 155 -TPANPTLKIID---MERVCKDAHSQEGVLVIA 183 (404)
T ss_dssp -SSCTTTCCCCC---HHHHHHHHHTSTTCEEEE
T ss_pred -CCCCCCCcccC---HHHHHHHHHhhcCCEEEE
Confidence 11122344442 3567888999 9998876
No 243
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=46.72 E-value=31 Score=31.10 Aligned_cols=27 Identities=15% Similarity=-0.012 Sum_probs=21.0
Q ss_pred eccccHHHHHHHhhhCCCcEEEecccc
Q 016064 301 INMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 301 ~nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
.|-.||..+.-+|+..+++-+|.+.+.
T Consensus 88 ~nv~gt~~ll~a~~~~~~~~~v~~SS~ 114 (319)
T 4b8w_A 88 KNVHMNDNVLHSAFEVGARKVVSCLST 114 (319)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEcch
Confidence 466799999999999998866655443
No 244
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=46.65 E-value=58 Score=24.55 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=44.7
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS--- 315 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~--- 315 (396)
.+|+++|..|.. ...+...|.+.|+.|....+..-+.- + ...|.|++..+- .+ ..-|-..+..+-+.
T Consensus 6 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~d~~~--~~----~~~g~~~~~~l~~~~~~ 78 (127)
T 2gkg_A 6 KKILIVESDTAL-SATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDL--SA----GQNGYLICGKLKKDDDL 78 (127)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHHTCEEEEECCHHHHHHHHHHHCCSEEEEESBC--GG----GCBHHHHHHHHHHSTTT
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhcCceEEEecCHHHHHHHHHhcCCCEEEEeCCC--CC----CCCHHHHHHHHhcCccc
Confidence 367777776542 44556677777888876665433322 2 357888886542 10 12243344444443
Q ss_pred CCCcEEEeccc
Q 016064 316 MNKPVYVAAES 326 (396)
Q Consensus 316 ~~vPvyV~aes 326 (396)
.++|++++ ..
T Consensus 79 ~~~~ii~~-~~ 88 (127)
T 2gkg_A 79 KNVPIVII-GN 88 (127)
T ss_dssp TTSCEEEE-EC
T ss_pred cCCCEEEE-ec
Confidence 57999988 44
No 245
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=46.39 E-value=34 Score=30.32 Aligned_cols=91 Identities=15% Similarity=0.172 Sum_probs=53.9
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----HHHHh-cccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----AVAYT-MDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----av~~~-m~~vd~VlvG 290 (396)
...|+.+|++..-..+.+.+.+. .+ |+++|..|.. +..+. .|+.+.. -|. .+... +.++|.|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~-----~~~~~-~~~~~i~-gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS--EV-FVLAEDENVR-----KKVLR-SGANFVH-GDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGH-----HHHHH-TTCEEEE-SCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHH-----HHHHh-cCCeEEE-cCCCCHHHHHhcCcchhcEEEEc
Confidence 45788889877666666555443 35 7888876542 34444 6766543 232 22222 6788888875
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhCCCc--EEEecc
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSMNKP--VYVAAE 325 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~~vP--vyV~ae 325 (396)
.+ +..-...++..|++.+.. +++-+.
T Consensus 79 ~~---------~d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 79 LE---------SDSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp CS---------CHHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CC---------CcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 42 224456778889987765 444443
No 246
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=46.26 E-value=1.5e+02 Score=27.70 Aligned_cols=102 Identities=14% Similarity=0.150 Sum_probs=55.9
Q ss_pred CceEEeecChHHHHHHHHHHHH-------CCCeeEEEEeCCCCCchhHHH-HHHHHh----------CCCCEEEEc--c-
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ-------NKKLFRVLCTEGRPDRSGLRL-ANELAK----------LDVPVKLLI--D- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~-------~gk~f~ViV~EsrP~~eG~~l-a~~L~~----------~GI~vtlI~--D- 274 (396)
..+++|-|.+..+..+++.+.. .|+. +|++.+ |.+.|... +..+.. .+.++..++ |
T Consensus 97 ~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~-~vi~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (406)
T 4adb_A 97 DRVFFCNSGAEANEAALKLARKFAHDRYGSHKS-GIVAFK--NAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDI 173 (406)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCC-EEEEET--TCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCH
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCc-EEEEEC--CCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcH
Confidence 4677787777777777765543 3433 555543 33333322 333322 123444442 3
Q ss_pred hHHHHhcc-cCCEEEEcceeEeecCCee--ccccHHHHHHHhhhCCCcEEE
Q 016064 275 SAVAYTMD-EVDMVFVGADGVVESGGII--NMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 275 sav~~~m~-~vd~VlvGAd~V~~NG~v~--nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..+-..+. ++..|++- -+...|+++ ..-=-..++-+|+++++++++
T Consensus 174 ~~l~~~l~~~~~~v~~~--p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~ 222 (406)
T 4adb_A 174 NSASALIDDSTCAVIVE--PIQGEGGVVPASNAFLQGLRELCNRHNALLIF 222 (406)
T ss_dssp HHHHTTCSTTEEEEEEC--SEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCeEEEEEe--CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 22333332 34444444 467777766 555556788889999998876
No 247
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=46.22 E-value=40 Score=33.54 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=54.1
Q ss_pred eecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHH--------HHHHhCCCCEEEEcc-------hHHHHhcc--
Q 016064 221 VHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLA--------NELAKLDVPVKLLID-------SAVAYTMD-- 282 (396)
Q Consensus 221 T~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la--------~~L~~~GI~vtlI~D-------sav~~~m~-- 282 (396)
|.|.+..+..+|....+.| -+|++.+ .|.+.|. .+. ..+...|+.+..++. .++...+.
T Consensus 98 ~~sGt~A~~~al~all~pG--D~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~ 174 (427)
T 3hvy_A 98 FVNGTHAIGAALFGNLRPN--DTMMSIC-GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKD 174 (427)
T ss_dssp CCSHHHHHHHHHHHTCCTT--CEEEECS-SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhcCCC--CEEEEeC-CCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCC
Confidence 5555555555554443334 3666665 3444443 343 456677998887653 44544453
Q ss_pred -cCCEEEEcceeEeecCCeeccccH----HHHHHHhhh--CCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGT----YQIALVAHS--MNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT----~~lAl~Ak~--~~vPvyV 322 (396)
+..+|++.... |...|..|+ ..++-+|++ ++++++|
T Consensus 175 ~~tklV~i~~s~----gyp~nptg~v~dl~~i~~ia~~~~~g~~liv 217 (427)
T 3hvy_A 175 DSIKLIHIQRST----GYGWRKSLRIAEIAEIIKSIREVNENVIVFV 217 (427)
T ss_dssp TTEEEEEEESSC----CSSSSCCCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCCEEEEEECCC----CCCCCccccHHHHHHHHHHHHHhCCCCEEEE
Confidence 45556555422 235555555 456777888 8998887
No 248
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=46.06 E-value=44 Score=30.47 Aligned_cols=44 Identities=14% Similarity=0.056 Sum_probs=24.3
Q ss_pred HHHHhcccCCEEEEcc-eeEeecCC-----------eeccccHHHHHHHhhhCCCc
Q 016064 276 AVAYTMDEVDMVFVGA-DGVVESGG-----------IINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 276 av~~~m~~vd~VlvGA-d~V~~NG~-----------v~nkiGT~~lAl~Ak~~~vP 319 (396)
.....+..+|.|+=-| ..+..... -.|--||..++-+++..+++
T Consensus 44 ~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~ 99 (298)
T 4b4o_A 44 LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP 99 (298)
T ss_dssp HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC
Confidence 3345567888877422 12211110 12456888888888776654
No 249
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=46.03 E-value=44 Score=26.83 Aligned_cols=80 Identities=19% Similarity=0.163 Sum_probs=46.3
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-h
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-S 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~ 315 (396)
+..+|+|+|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+- .+ .-|--.+..+-+ .
T Consensus 13 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~ 84 (153)
T 3hv2_A 13 RRPEILLVDSQEVI-LQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHL--PQ-----MDGPTLLARIHQQY 84 (153)
T ss_dssp SCCEEEEECSCHHH-HHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SS-----SCHHHHHHHHHHHC
T ss_pred CCceEEEECCCHHH-HHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCC--Cc-----CcHHHHHHHHHhHC
Confidence 45677777776543 34456667777777776665433322 2 457888886543 22 224333433333 3
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 85 ~~~~ii~~s~~~ 96 (153)
T 3hv2_A 85 PSTTRILLTGDP 96 (153)
T ss_dssp TTSEEEEECCCC
T ss_pred CCCeEEEEECCC
Confidence 579999988643
No 250
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=46.01 E-value=76 Score=30.81 Aligned_cols=100 Identities=9% Similarity=0.024 Sum_probs=53.7
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------------------h
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------------------S 275 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------------------s 275 (396)
..+++|.|.+..+..+++.+.+.|. +|++.+ |.+.|..- .+...|.++..++. .
T Consensus 119 ~~v~~t~G~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~ 192 (447)
T 3b46_A 119 ENVTVTTGANEGILSCLMGLLNAGD--EVIVFE--PFFDQYIP--NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFE 192 (447)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHHH--HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHH
T ss_pred hhEEEeCCHHHHHHHHHHHHcCCCC--EEEEeC--CCchhHHH--HHHHcCCEEEEEeCCCccccccccccccCcccCHH
Confidence 3677887777777777666544343 566655 66666443 34456777665542 1
Q ss_pred HHHHhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 276 AVAYTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 276 av~~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+...+ +++..|++- .---..|.++.+-==..++-+|+++++.+++
T Consensus 193 ~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 239 (447)
T 3b46_A 193 QFEKAITSKTKAVIIN-TPHNPIGKVFTREELTTLGNICVKHNVVIIS 239 (447)
T ss_dssp HHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhccCCeEEEEe-CCCCCCCcccCHHHHHHHHHHHHHcCcEEEE
Confidence 122222 233344432 1111234444433334567788999988776
No 251
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=45.76 E-value=39 Score=34.79 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=56.1
Q ss_pred HHHhhccccCceEEeecChH------HHHHHHHHHHH---CC--CeeEEEEe-CCC-----------------CCchhHH
Q 016064 207 MLSQDFIFDGCTILVHGFSR------VVMEVLKMAAQ---NK--KLFRVLCT-EGR-----------------PDRSGLR 257 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S~------~V~~~L~~A~~---~g--k~f~ViV~-Esr-----------------P~~eG~~ 257 (396)
+.|+.+|+||++|...|+.+ .+.++.+++.+ +| .+++++.. -.. |++.|..
T Consensus 9 eEAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~~~~~~~ 88 (506)
T 2nvv_A 9 EEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTPYQSNKD 88 (506)
T ss_dssp HHHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH
T ss_pred HHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCceEEEEEecCCCcchhHHhccCCceEEEeeeCCCHH
Confidence 45567899999999998752 34445555443 33 24555531 111 2333444
Q ss_pred HHHHHHhCCCCEEEEcchHHHHhcc-----cCCEEEEcceeEeecCCeecc
Q 016064 258 LANELAKLDVPVKLLIDSAVAYTMD-----EVDMVFVGADGVVESGGIINM 303 (396)
Q Consensus 258 la~~L~~~GI~vtlI~Dsav~~~m~-----~vd~VlvGAd~V~~NG~v~nk 303 (396)
+.+...+-.++..-+.-+.+..++. ++|..|+.|...-++|.+.-.
T Consensus 89 ~r~~i~~G~i~~~P~~ls~v~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 139 (506)
T 2nvv_A 89 LRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPT 139 (506)
T ss_dssp HHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECC
T ss_pred HHHHHHcCCCeEeCCCcccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 4444333333333333455554442 699999999999999987543
No 252
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=45.74 E-value=71 Score=30.22 Aligned_cols=89 Identities=17% Similarity=0.177 Sum_probs=49.5
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhc-ccCCEEEEcceeE
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTM-DEVDMVFVGADGV 294 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m-~~vd~VlvGAd~V 294 (396)
..|..+|-.++=...+ +-++++| ++|.+.|.++... +..+|.+.||++.+-.+.. .+. ..+|.|+++. +|
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~--~l~~~~~d~vV~Sp-gi 76 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAA--QLDEFKADVYVIGN-VA 76 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCTT---HHHHHHHTTCEEEESCCGG--GGGSCCCSEEEECT-TC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHH--HcCCCCCCEEEECC-Cc
Confidence 4566665544323222 1223334 6788889876542 4567888999887644422 233 4688888764 12
Q ss_pred eecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 295 VESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 295 ~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
-. +.+....|++.++||+=
T Consensus 77 ~~---------~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 77 KR---------GMDVVEAILNLGLPYIS 95 (326)
T ss_dssp CT---------TCHHHHHHHHTTCCEEE
T ss_pred CC---------CCHHHHHHHHcCCcEEe
Confidence 11 12344456666666653
No 253
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=45.73 E-value=18 Score=29.42 Aligned_cols=53 Identities=11% Similarity=0.017 Sum_probs=34.6
Q ss_pred HhCCCCEEEE--cchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 263 AKLDVPVKLL--IDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 263 ~~~GI~vtlI--~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
.+.|+++... +.+.+...+.+.|.|++|-..-+.- -.+--.|..+++||.|.-
T Consensus 31 ~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~---------~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 31 NLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYY---------REMKVDAERLGIQIVATR 85 (108)
T ss_dssp HHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGH---------HHHHHHHTTTTCEEEECC
T ss_pred HHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHH---------HHHHHHhhhcCCcEEEeC
Confidence 3457777773 3444455568899999997654331 124455667899998864
No 254
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=45.73 E-value=48 Score=32.97 Aligned_cols=96 Identities=10% Similarity=0.038 Sum_probs=54.3
Q ss_pred eecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHH--------HHHHhCCCCEEEEcc--------hHHHHhcc--
Q 016064 221 VHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLA--------NELAKLDVPVKLLID--------SAVAYTMD-- 282 (396)
Q Consensus 221 T~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la--------~~L~~~GI~vtlI~D--------sav~~~m~-- 282 (396)
|.|.+..+..+|....+.| -+|++.+..++..-..+. ..+...|+.+..++. ..+...+.
T Consensus 97 ~~sGt~Ai~~al~all~pG--D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~ 174 (427)
T 3i16_A 97 FVNGTHALGAALFGNLRPG--NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED 174 (427)
T ss_dssp CCSHHHHHHHHHHHHCCTT--CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC
T ss_pred CccHHHHHHHHHHHHhCCC--CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC
Confidence 5555555555554443334 366666533333223344 456777998888753 34444454
Q ss_pred -cCCEEEEcceeEeecCCeeccccH----HHHHHHhhh--CCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGT----YQIALVAHS--MNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT----~~lAl~Ak~--~~vPvyV 322 (396)
+..+|++... -|..-|..|+ ..++-+|++ ++++++|
T Consensus 175 ~~tklV~i~~s----~~~p~nptg~i~dl~~i~~la~~~~~g~~liv 217 (427)
T 3i16_A 175 ESITLVHIQRS----TGYGWRRALLIEDIKSIVDCVKNIRKDIICFV 217 (427)
T ss_dssp TTEEEEEEECS----CCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCEEEEEEcC----CCCCCCCcccHHHHHHHHHHHHHhCCCCEEEE
Confidence 4445554432 1335666666 346777888 8998887
No 255
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=45.60 E-value=42 Score=26.13 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=48.2
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-h
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-S 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~ 315 (396)
..++|+++|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+- .+ .-|.-.+..+-+ .
T Consensus 6 ~~~~ilivdd~~~~-~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (137)
T 3hdg_A 6 VALKILIVEDDTDA-REWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRM--PK-----LGGLEMLDRIKAGG 77 (137)
T ss_dssp -CCCEEEECSCHHH-HHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSC--SS-----SCHHHHHHHHHHTT
T ss_pred cccEEEEEeCCHHH-HHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCC--CC-----CCHHHHHHHHHhcC
Confidence 35678888876543 34456777777888877776543332 2 468888887642 22 224333433333 3
Q ss_pred CCCcEEEeccccc
Q 016064 316 MNKPVYVAAESYK 328 (396)
Q Consensus 316 ~~vPvyV~aes~K 328 (396)
.++|+++++....
T Consensus 78 ~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 78 AKPYVIVISAFSE 90 (137)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCcEEEEecCcC
Confidence 5689988876543
No 256
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=45.49 E-value=1.2e+02 Score=26.47 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=62.0
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-cc----hHHHHhcc------
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-ID----SAVAYTMD------ 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~D----sav~~~m~------ 282 (396)
.|.+||..|-|+-+-..+. ...++| .+|+++..++ .....+..+|.+.|-.+.++ .| .++..++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4678888888776655444 344445 5677765443 23455677787777666654 23 23444443
Q ss_pred -cCCEEEEcceeEeecCCe------------eccccHHHHHHHhh----hCCCcEEEeccc
Q 016064 283 -EVDMVFVGADGVVESGGI------------INMMGTYQIALVAH----SMNKPVYVAAES 326 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v------------~nkiGT~~lAl~Ak----~~~vPvyV~aes 326 (396)
++|.||-.|-. ...+.. +|-.|++.+.-.+. ..+...+|...+
T Consensus 87 ~~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS 146 (255)
T 1fmc_A 87 GKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_dssp SSCCEEEECCCC-CCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCCEEEECCCC-CCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 78888876532 222211 46678877776663 345555554433
No 257
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=45.49 E-value=59 Score=30.14 Aligned_cols=98 Identities=10% Similarity=0.176 Sum_probs=50.8
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch--------HHHHhc-ccCC
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS--------AVAYTM-DEVD 285 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds--------av~~~m-~~vd 285 (396)
...+++|-|.+..+..++....+.|. +|++.+ |.+.+.. ..+...|.++..++-. .+...+ ++..
T Consensus 84 ~~~v~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 157 (363)
T 3ffh_A 84 EEELIFTAGVDELIELLTRVLLDTTT--NTVMAT--PTFVQYR--QNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTT 157 (363)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCSTTC--EEEEEE--SSCHHHH--HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEE
T ss_pred hhhEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CChHHHH--HHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCC
Confidence 34577776666666666655433343 566554 5555533 3445568888777632 333334 3444
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhC--CCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSM--NKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~--~vPvyV 322 (396)
.|++ ...-...|.+...- .+.-+++.+ ++.+++
T Consensus 158 ~v~~-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 192 (363)
T 3ffh_A 158 IVWI-CNPNNPTGNYIELA---DIQAFLDRVPSDVLVVL 192 (363)
T ss_dssp EEEE-ESSCTTTCCCCCHH---HHHHHHTTSCTTSEEEE
T ss_pred EEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCcEEEE
Confidence 5554 22222234333322 355555555 777665
No 258
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=45.47 E-value=92 Score=23.45 Aligned_cols=76 Identities=12% Similarity=0.050 Sum_probs=42.1
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.|++..+- .+ .-|...+..+-+..++|
T Consensus 5 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~~~~ 76 (123)
T 1xhf_A 5 HILIVEDELVT-RNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINL--PG-----KNGLLLARELREQANVA 76 (123)
T ss_dssp EEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHSCCSEEEECSSC--SS-----SCHHHHHHHHHHHCCCE
T ss_pred eEEEEeCCHHH-HHHHHHHHhhCCcEEEEeCCHHHHHHHHhcCCCCEEEEcCCC--CC-----CCHHHHHHHHHhCCCCc
Confidence 56677765542 3344556666777776555533222 12 357888876542 22 22443444444446899
Q ss_pred EEEeccc
Q 016064 320 VYVAAES 326 (396)
Q Consensus 320 vyV~aes 326 (396)
+++++..
T Consensus 77 ii~~s~~ 83 (123)
T 1xhf_A 77 LMFLTGR 83 (123)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 9888754
No 259
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=45.28 E-value=76 Score=29.90 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=54.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------hHHHHhcc--cCC
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------SAVAYTMD--EVD 285 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------sav~~~m~--~vd 285 (396)
...+++|.|.+..+..++..+.+.| -+|++. .|.+.|... .+...|.++..++. ..+-..+. ++.
T Consensus 91 ~~~v~~~~g~~~al~~~~~~~~~~g--d~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 164 (397)
T 2zyj_A 91 PEEVLITTGSQQALDLVGKVFLDEG--SPVLLE--APSYMGAIQ--AFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPR 164 (397)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEE--ESCCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCS
T ss_pred hhhEEEeccHHHHHHHHHHHhCCCC--CEEEEe--CCCcHHHHH--HHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCe
Confidence 3467777776766666665543334 355553 355656443 34457887776642 22333333 454
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++=...-...|.+...--=..++-+|+++++.+++
T Consensus 165 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4433222212234443322122677788999998876
No 260
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=45.23 E-value=1.2e+02 Score=24.80 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=54.5
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--ch-HHHHh-cccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--DS-AVAYT-MDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--Ds-av~~~-m~~vd~VlvGA 291 (396)
+..|+..|.+..-..+.+.+.+.| .+|.+++..|...-.. ..+....|+++..-. |. .+... +.++|.|++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~~~~-~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDDIKQ-LEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHHHHH-HHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHHHHH-HHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 346777788776666666666556 4566667654211112 223345576654421 21 22222 67888888765
Q ss_pred eeEeecCCeeccccHHHHHHHhhhC-C-CcEEEecccc
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSM-N-KPVYVAAESY 327 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~-~-vPvyV~aes~ 327 (396)
+. ..-...++..|+.. + .++++.+...
T Consensus 80 ~~---------d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 80 DN---------DADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SC---------HHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CC---------hHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 32 22345677788775 4 4555545433
No 261
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=45.13 E-value=49 Score=28.23 Aligned_cols=99 Identities=9% Similarity=0.053 Sum_probs=56.5
Q ss_pred eEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cchHHHHhcccCCEEEEcceeE
Q 016064 218 TILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--IDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+||..|-|+-+-..| +.+.++| .+|+++..+|.. ...|. .++.+... .|... ..+..+|.||--|-.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~-----~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~- 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGK-----ITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGI- 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHH-----HHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCS-
T ss_pred eEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchh-----hhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcC-
Confidence 577778777654433 4445555 577766554421 22233 45543332 22222 566788888765533
Q ss_pred eecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 295 VESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 295 ~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.....-.|-.||..+.-+|+..+++-+|...+
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 22223457789999999999987665554433
No 262
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=44.99 E-value=76 Score=24.45 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=43.0
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-CCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS-MNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~-~~v 318 (396)
+|+++|..|.. ...+...|...|..|....+..-+. .+ ...|.||+..+- .+ .-|.-.+..+.+. ..+
T Consensus 5 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~~ 76 (136)
T 1mvo_A 5 KILVVDDEESI-VTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVML--PK-----LDGIEVCKQLRQQKLMF 76 (136)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESSC--SS-----SCHHHHHHHHHHTTCCC
T ss_pred EEEEEECCHHH-HHHHHHHHHHCCcEEEEecCHHHHHHHHhhcCCCEEEEecCC--CC-----CCHHHHHHHHHcCCCCC
Confidence 56777765542 3344566777787776655533222 12 357888886542 22 1243334444333 578
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 77 ~ii~~s~~~ 85 (136)
T 1mvo_A 77 PILMLTAKD 85 (136)
T ss_dssp CEEEEECTT
T ss_pred CEEEEECCC
Confidence 999887543
No 263
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=44.97 E-value=19 Score=35.75 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=51.5
Q ss_pred ccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
.+..|.+||..|.+..-..+.+.|++.| ++|++++..|..-+..++ ..-+...+....++..+..++|.|+.|.
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG--~~v~v~d~~~~~p~~~~a----d~~~~~~~~d~~~l~~~a~~~D~V~~~~ 104 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMG--YRVAVLDPDPASPAGAVA----DRHLRAAYDDEAALAELAGLCEAVSTEF 104 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCTTCHHHHHS----SEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCcCchhhhC----CEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence 5778999999999988788888887766 567778877776555443 2211111111134555558899999887
Q ss_pred eeE
Q 016064 292 DGV 294 (396)
Q Consensus 292 d~V 294 (396)
+.+
T Consensus 105 e~~ 107 (419)
T 4e4t_A 105 ENV 107 (419)
T ss_dssp TTC
T ss_pred CcC
Confidence 765
No 264
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=44.88 E-value=1.3e+02 Score=24.82 Aligned_cols=62 Identities=15% Similarity=0.211 Sum_probs=36.6
Q ss_pred HHHHHhCCCC-EEEEc-chHHH-Hhc-----ccCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEec
Q 016064 259 ANELAKLDVP-VKLLI-DSAVA-YTM-----DEVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 259 a~~L~~~GI~-vtlI~-Dsav~-~~m-----~~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~a 324 (396)
.+.+.+.|++ +.... ....+ .++ .++|+|++|+..- |++-. -.|+-.--++ ++..+||+|+-
T Consensus 87 ~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~---~~~~~~~lGSva~~vl-~~a~~PVlvV~ 157 (163)
T 1tq8_A 87 KERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGL---STIAGRLLGSVPANVS-RRAKVDVLIVH 157 (163)
T ss_dssp HHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCC---CSHHHHHTBBHHHHHH-HHTTCEEEEEC
T ss_pred HHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCC---CcccceeeccHHHHHH-HhCCCCEEEEe
Confidence 3445677998 65433 22222 222 5799999999752 22222 2566555444 45679999974
No 265
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=44.88 E-value=47 Score=34.05 Aligned_cols=94 Identities=19% Similarity=0.207 Sum_probs=52.7
Q ss_pred HHhhccccCceEEeecChH------HHHHHHHHHHHCCCeeEEEEe-CCCC-----------------CchhHHHHHHHH
Q 016064 208 LSQDFIFDGCTILVHGFSR------VVMEVLKMAAQNKKLFRVLCT-EGRP-----------------DRSGLRLANELA 263 (396)
Q Consensus 208 ~a~~~I~dg~~ILT~~~S~------~V~~~L~~A~~~gk~f~ViV~-EsrP-----------------~~eG~~la~~L~ 263 (396)
.|+.+|+||++|...|+.. .+.++.+++.+++.+++++.. -..| ++.|..+.+. .
T Consensus 20 EAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~~~~~~~~r~~-i 98 (497)
T 2g39_A 20 EAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKERPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRKA-I 98 (497)
T ss_dssp HHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHSCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCCCHHHHHH-H
T ss_pred HHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhcCCceEEEEecccccccchHHHhcCCceEEEEeeCCCHHHHHH-H
Confidence 4556899999999988752 344444444322333555531 1122 2333344333 3
Q ss_pred hCCCCEEEEc--chHHHHhc-c----cCCEEEEcceeEeecCCeecc
Q 016064 264 KLDVPVKLLI--DSAVAYTM-D----EVDMVFVGADGVVESGGIINM 303 (396)
Q Consensus 264 ~~GI~vtlI~--Dsav~~~m-~----~vd~VlvGAd~V~~NG~v~nk 303 (396)
+.|- +.+++ -+.+...+ . ++|..|+.|...-++|.+.-.
T Consensus 99 ~~G~-v~fvP~~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 144 (497)
T 2g39_A 99 NAGE-VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPT 144 (497)
T ss_dssp HTTS-SEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECC
T ss_pred HcCC-CeEECCccccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 4442 34433 23344333 1 699999999999999987543
No 266
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=44.77 E-value=84 Score=30.74 Aligned_cols=102 Identities=10% Similarity=-0.003 Sum_probs=52.9
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------hHHHHhcc-----
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------SAVAYTMD----- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------sav~~~m~----- 282 (396)
..++++|.|.+..+..+++.+.+.| -+|++.+ |.+.|... .+...|.++..++. .++...+.
T Consensus 140 ~~~v~~t~G~~~al~~~~~~l~~~G--d~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~ 213 (448)
T 3aow_A 140 DNDIMITSGSQQALDLIGRVFLNPG--DIVVVEA--PTYLAALQ--AFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQ 213 (448)
T ss_dssp TSEEEEESSHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred hhhEEEeCcHHHHHHHHHHHHcCCC--CEEEEeC--CChHHHHH--HHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhcc
Confidence 3457777666666666665553334 3555543 66666543 34456877766642 23333443
Q ss_pred --cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 --EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 --~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++=...=...|.++..---..++-+|+++++++++
T Consensus 214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2333322111111124443322224677889999998776
No 267
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=44.75 E-value=83 Score=23.94 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=45.5
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCC-CEEEEcchHHH--Hhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDV-PVKLLIDSAVA--YTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI-~vtlI~Dsav~--~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
++..+|+++|..|.. ...+...|.+.|. .|....+..-+ .+- ...|.|++..+ +.+ .-|--.+..+-+
T Consensus 2 ~~~~~ilivdd~~~~-~~~l~~~l~~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~--l~~-----~~g~~l~~~l~~ 73 (128)
T 1jbe_A 2 DKELKFLVVDDFSTM-RRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWN--MPN-----MDGLELLKTIRA 73 (128)
T ss_dssp CTTCCEEEECSCHHH-HHHHHHHHHHTTCCCEEEESSHHHHHHHHTTCCCCEEEEESC--CSS-----SCHHHHHHHHHC
T ss_pred CCccEEEEECCCHHH-HHHHHHHHHHcCCcEEEeeCCHHHHHHHHHhcCCCEEEEeCC--CCC-----CCHHHHHHHHHh
Confidence 345678888877653 3455667777888 56666654322 222 35788887543 222 124333333333
Q ss_pred ---hCCCcEEEeccc
Q 016064 315 ---SMNKPVYVAAES 326 (396)
Q Consensus 315 ---~~~vPvyV~aes 326 (396)
...+|+++++..
T Consensus 74 ~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 74 XXAMSALPVLMVTAE 88 (128)
T ss_dssp --CCTTCCEEEEESS
T ss_pred hcccCCCcEEEEecC
Confidence 246899988754
No 268
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=44.75 E-value=60 Score=29.23 Aligned_cols=52 Identities=12% Similarity=0.291 Sum_probs=30.3
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
.||.-|+.+..+.++ .+.++|. .++|. |+=.+|...|.+.| .+.|||+.++.
T Consensus 4 aVl~SG~Gs~L~aLi-~~~~~~~~~~~I~~Vvs~~~~~~~~~~A---~~~gIp~~~~~ 57 (209)
T 1meo_A 4 AVLISGTGSNLQALI-DSTREPNSSAQIDIVISNKAAVAGLDKA---ERAGIPTRVIN 57 (209)
T ss_dssp EEEESSSCTTHHHHH-HHHHSTTCSCEEEEEEESSTTCHHHHHH---HHTTCCEEECC
T ss_pred EEEEECCchHHHHHH-HHHhcCCCCcEEEEEEeCCCChHHHHHH---HHcCCCEEEEC
Confidence 355555555555555 5555553 45655 33345566676544 57799998765
No 269
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=44.70 E-value=1.2e+02 Score=28.14 Aligned_cols=69 Identities=13% Similarity=-0.003 Sum_probs=39.9
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE---cchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL---IDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI---~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
...+++++.-+ +..+-+...+++.+..=+|.++ ...-+..+|..+|+++..+ |+. .+=|-.
T Consensus 228 ~~~~~lv~~~g-~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-------------~g~--~lEA~a 291 (376)
T 1v4v_A 228 FPHLTFVYPVH-LNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------------GGL--QEEGAA 291 (376)
T ss_dssp CTTSEEEEECC-SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------------HHH--HHHHHH
T ss_pred CCCeEEEEECC-CCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-------------cCH--HHHHHH
Confidence 44567666522 1111122333333222257776 4446788899999987653 333 446778
Q ss_pred CCCcEEEe
Q 016064 316 MNKPVYVA 323 (396)
Q Consensus 316 ~~vPvyV~ 323 (396)
+|+|+++.
T Consensus 292 ~G~PvI~~ 299 (376)
T 1v4v_A 292 LGVPVVVL 299 (376)
T ss_dssp TTCCEEEC
T ss_pred cCCCEEec
Confidence 99999975
No 270
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=44.52 E-value=2e+02 Score=26.77 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=55.1
Q ss_pred EEeecC-hHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhcc--cCCEE
Q 016064 219 ILVHGF-SRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTMD--EVDMV 287 (396)
Q Consensus 219 ILT~~~-S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m~--~vd~V 287 (396)
|+..+. +..+..+++.+.+.| -+|++.+ |.+-|..+...+...|.++..++- ..+-..+. ++..|
T Consensus 67 v~~~~sgt~al~~~~~~~~~~g--d~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v 142 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSAIRPG--DKVLVPV--FGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLL 142 (411)
T ss_dssp EEEESCHHHHHHHHHHHHCCTT--CEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEECCCcHHHHHHHHHHhcCCC--CEEEEec--CCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEE
Confidence 443343 445555665554333 3566554 555565566677788988887752 23444443 66666
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++-. .=...|.+ ..+ -.++-+|+++++.+++
T Consensus 143 ~~~~-~~nptG~~-~~l--~~i~~l~~~~~~~li~ 173 (411)
T 3nnk_A 143 LTVQ-GDTSTTML-QPL--AELGEICRRYDALFYT 173 (411)
T ss_dssp EEES-EETTTTEE-CCC--TTHHHHHHHHTCEEEE
T ss_pred EEeC-CCCCccee-ccH--HHHHHHHHHcCCEEEE
Confidence 6643 11223433 332 3577889999998876
No 271
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=44.44 E-value=24 Score=34.98 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=42.7
Q ss_pred EEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 271 LLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 271 lI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
..+-.++.++|..-+ .-|+++.-|.|..-+|+-.---+|.+|++|++|..
T Consensus 178 ~l~pPa~~all~~~~----~idgfi~PGHVstIiG~~~y~~l~~~y~~P~VVaG 227 (372)
T 2z1d_A 178 RLTPPAVEVLLKQGT----VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAG 227 (372)
T ss_dssp ECHHHHHHHHHHTSC----CCSEEEEEHHHHHHHTTHHHHHHHHHHCCCEEEEC
T ss_pred cccHHHHHHHHcCCC----cCcEEEecCeeeEEeccchhHHHHHHcCCCEEEcC
Confidence 344577888886655 77888888999999999999999999999999865
No 272
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=44.44 E-value=34 Score=32.44 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=59.1
Q ss_pred CceEEeecChH------HHHHHHHHHHHCCCeeEEEEeCCCCCchh----HHHHHHHHhCCCC---------EEE---Ec
Q 016064 216 GCTILVHGFSR------VVMEVLKMAAQNKKLFRVLCTEGRPDRSG----LRLANELAKLDVP---------VKL---LI 273 (396)
Q Consensus 216 g~~ILT~~~S~------~V~~~L~~A~~~gk~f~ViV~EsrP~~eG----~~la~~L~~~GI~---------vtl---I~ 273 (396)
..+|+..|+-. .+.+.+....+++..++++++-..|...+ ..+.+...+.|++ +.+ ++
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 45788777732 24444544444456667665544443322 3444455567876 222 44
Q ss_pred chHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 274 DSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 274 Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
+..+..++..+|.+++-.. .+ |.-...+=|-.+|+||++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~--~E--------~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSS--GE--------GFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp HHHHHHHHHHCSEEEECCS--CC--------SSCHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCC--cC--------CCCcHHHHHHHcCCCEEEc
Confidence 5678999999999998543 12 2223456678899999873
No 273
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=44.42 E-value=83 Score=29.62 Aligned_cols=100 Identities=6% Similarity=-0.022 Sum_probs=55.0
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------------------hH
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------------------SA 276 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------------------sa 276 (396)
..+++|.|.+..+..++..+.+.|. +|++. .|.+.+... .+...|.++..++- ..
T Consensus 86 ~~i~~~~g~~~a~~~~~~~~~~~gd--~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 86 EEILVAVGAYGSLFNSIQGLVDPGD--EVIIM--VPFYDCYEP--MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp TSEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESCCTTHHH--HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHH
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCCC--EEEEe--CCCchhhHH--HHHHcCCEEEEEeccccccccccccccCCcCCHHH
Confidence 4678887777777777766544343 55554 344444432 34456776666542 12
Q ss_pred HHHhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 277 VAYTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 277 v~~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+-..+ +++..|++. ..--..|.++.+---..++-+|+++++++++
T Consensus 160 l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 160 LESKFSSKTKAIILN-TPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhhcCCCceEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 22233 234444442 1112334444444445677789999998876
No 274
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=44.34 E-value=37 Score=32.23 Aligned_cols=107 Identities=18% Similarity=0.227 Sum_probs=53.4
Q ss_pred cccCceEEeecChHHHHHHHHHHHHCCC---eeEEEEeCCCCCchhHHHH-HH---HHhCCCCEEEEcch---------H
Q 016064 213 IFDGCTILVHGFSRVVMEVLKMAAQNKK---LFRVLCTEGRPDRSGLRLA-NE---LAKLDVPVKLLIDS---------A 276 (396)
Q Consensus 213 I~dg~~ILT~~~S~~V~~~L~~A~~~gk---~f~ViV~EsrP~~eG~~la-~~---L~~~GI~vtlI~Ds---------a 276 (396)
+....+++|-|.+..+..+++.+.+.|. .-+|+++|+ |.+.|...+ .. +...+..+..+++. +
T Consensus 96 ~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (417)
T 3g7q_A 96 IEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLA-PEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEH 174 (417)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSC-CCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGG
T ss_pred CCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCC-CccccchhhccchhhhccccCcccccCCcccccccCHHH
Confidence 3445688887777766666655543322 236777643 666665432 21 22334444444322 1
Q ss_pred HHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 277 VAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 277 v~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+. +-+++..|++. ..--..|.++..---..++-+|+++++++++
T Consensus 175 l~-~~~~~~~v~~~-~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 175 LH-IGEETGMICVS-RPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp CC-CCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hc-cccCceEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 11 11223333332 1112234444444456677789999998886
No 275
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=44.27 E-value=29 Score=27.18 Aligned_cols=81 Identities=14% Similarity=0.117 Sum_probs=47.6
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCC-CCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLD-VPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~G-I~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
....+|+++|..|.. ...+...|.+.| +.|....+..-+.- + ...|.||+..+ +.+ .-|.-.+..+-+
T Consensus 12 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~-----~~g~~~~~~l~~ 83 (135)
T 3snk_A 12 TKRKQVALFSSDPNF-KRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLG--GGD-----LLGKPGIVEARA 83 (135)
T ss_dssp -CCEEEEEECSCHHH-HHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEE--TTG-----GGGSTTHHHHHG
T ss_pred CCCcEEEEEcCCHHH-HHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCC--CCC-----chHHHHHHHHHh
Confidence 345678888876653 344567777888 88876665433322 2 45788888654 222 223333333333
Q ss_pred h-CCCcEEEecccc
Q 016064 315 S-MNKPVYVAAESY 327 (396)
Q Consensus 315 ~-~~vPvyV~aes~ 327 (396)
. .++|+++++...
T Consensus 84 ~~~~~~ii~~s~~~ 97 (135)
T 3snk_A 84 LWATVPLIAVSDEL 97 (135)
T ss_dssp GGTTCCEEEEESCC
T ss_pred hCCCCcEEEEeCCC
Confidence 3 479999988643
No 276
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=44.13 E-value=1.5e+02 Score=25.17 Aligned_cols=37 Identities=8% Similarity=-0.071 Sum_probs=27.6
Q ss_pred hhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 254 SGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
+-.++++.+++.|+++..|++..-+.+.+.+|.+|.-
T Consensus 131 ~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~ 167 (198)
T 2xbl_A 131 NILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEV 167 (198)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEe
Confidence 3456688888999999999986555555678887743
No 277
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=44.12 E-value=50 Score=30.76 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=52.7
Q ss_pred ccccCceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch--------HHHHhcc
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS--------AVAYTMD 282 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds--------av~~~m~ 282 (396)
++.....|+|-|.+..+..++..+ .+.| -+|++.+ |.+.|.. ..+...|+++..++-. .+...+.
T Consensus 50 ~~~~~~~~~~~~gt~a~~~~~~~~~~~~g--d~v~~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~ 123 (374)
T 3uwc_A 50 LHNAPHAIGVGTGTDALAMSFKMLNIGAG--DEVITCA--NTFIASV--GAIVQAGATPVLVDSENGYVIDPEKIEAAIT 123 (374)
T ss_dssp HTTCSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEES--SSCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGTGGGCC
T ss_pred HhCCCcEEEeCCHHHHHHHHHHHcCCCCC--CEEEECC--CccHHHH--HHHHHcCCEEEEEecCCCCCcCHHHHHHhCC
Confidence 333346777776666666555544 3333 3566543 4555544 3356779888887632 1222222
Q ss_pred cCCEEEEcceeEeecCCeeccccH----HHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGT----YQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT----~~lAl~Ak~~~vPvyV 322 (396)
+=.++++ +.|..|+ ..++-+|+++++++++
T Consensus 124 ~~~~~v~----------~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 124 DKTKAIM----------PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp TTEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEE----------EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 2123333 2233443 5678889999998887
No 278
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=44.10 E-value=1.1e+02 Score=30.27 Aligned_cols=84 Identities=12% Similarity=0.152 Sum_probs=53.3
Q ss_pred EEE-EeCCCCCchh---HHHHHHHHhCCCCEEEE--cch---HHHHh---cccCCEEEEcceeEeecCCeeccccHHHHH
Q 016064 243 RVL-CTEGRPDRSG---LRLANELAKLDVPVKLL--IDS---AVAYT---MDEVDMVFVGADGVVESGGIINMMGTYQIA 310 (396)
Q Consensus 243 ~Vi-V~EsrP~~eG---~~la~~L~~~GI~vtlI--~Ds---av~~~---m~~vd~VlvGAd~V~~NG~v~nkiGT~~lA 310 (396)
+|. +-.|.-++.- ..+|+.|.+.|+++.++ .|. .++.+ +.+++.+++|+-++ ||++.-.+-....-
T Consensus 267 ~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~--~~~~~p~~~~~l~~ 344 (410)
T 4dik_A 267 KVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTY--EAEIHPLMRFTLLE 344 (410)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCT--TSSSCHHHHHHHHH
T ss_pred ceeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCc--CCcCCHHHHHHHHH
Confidence 443 4456544432 34477788999998753 332 24444 46899999999876 67888877766666
Q ss_pred HHhhhC-CCcEEEecccccc
Q 016064 311 LVAHSM-NKPVYVAAESYKF 329 (396)
Q Consensus 311 l~Ak~~-~vPvyV~aes~Kf 329 (396)
+.+..+ ++++- +.++|--
T Consensus 345 l~~~~~~~K~~~-~FGSyGW 363 (410)
T 4dik_A 345 IIDKANYEKPVL-VFGVHGW 363 (410)
T ss_dssp HHHHCCCCCEEE-EEEECCC
T ss_pred HHhcccCCCEEE-EEECCCC
Confidence 666654 56554 4456543
No 279
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=44.08 E-value=94 Score=28.93 Aligned_cols=99 Identities=9% Similarity=-0.051 Sum_probs=53.4
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc--------hHHHHhc-ccCCEE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID--------SAVAYTM-DEVDMV 287 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D--------sav~~~m-~~vd~V 287 (396)
.+++|-|.+..+..+++.+.+.| -+|++. .|.+.|... .+...|.++..++- ..+-..+ +++..|
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~~~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 162 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALTEPE--DLLLLP--EVAYPSYFG--AARVASLRTFLIPLREDGLADLKAVPEGVWREAKVL 162 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCHHHHH--HHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEE
T ss_pred cEEEcCCcHHHHHHHHHHhcCCC--CEEEEC--CCCcHhHHH--HHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEE
Confidence 67777776666666665543334 356654 466666543 34457888777752 1111111 344455
Q ss_pred EEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 288 FVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 288 lvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++. ..-...|.++..---..++-+|+++++++++
T Consensus 163 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 163 LLN-YPNNPTGAVADWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp EEC-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEC-CCCCCcCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 553 2112234443322223577788999998876
No 280
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=44.03 E-value=1.1e+02 Score=23.47 Aligned_cols=56 Identities=11% Similarity=0.040 Sum_probs=38.4
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCC-CCCchhHHHHHHHHhC----CCCEEEEcch
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEG-RPDRSGLRLANELAKL----DVPVKLLIDS 275 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~Es-rP~~eG~~la~~L~~~----GI~vtlI~Ds 275 (396)
.|..|.+..........+.. ..+.+++++- -|...|..+.+.|++. ++++.+++..
T Consensus 26 ~~~~v~~~~~~~~a~~~l~~-----~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 26 GEFDCTTAADGASGLQQALA-----HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp TTSEEEEESSHHHHHHHHHH-----SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCcEEEEECCHHHHHHHHhc-----CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 45566666666555444432 2477887774 4888999999999985 6777777653
No 281
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=44.01 E-value=32 Score=35.20 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhccccCceEEe-ecChHHHHHHHHHHHHCCCeeEEEEeCC-----CCCchhHHHHHHHHhCCC-CEEE
Q 016064 199 YKARKIIAMLSQDFIFDGCTILV-HGFSRVVMEVLKMAAQNKKLFRVLCTEG-----RPDRSGLRLANELAKLDV-PVKL 271 (396)
Q Consensus 199 ~~a~~~Ia~~a~~~I~dg~~ILT-~~~S~~V~~~L~~A~~~gk~f~ViV~Es-----rP~~eG~~la~~L~~~GI-~vtl 271 (396)
...++.|+.++++.|+||++|-. +|-...|..++ ..++.+. +.+|+ .|.......-..+...|- .+++
T Consensus 260 ~~~~~~Ia~raA~el~dG~~vnlGIGiP~~v~~~~----~~~~~l~-l~~E~G~~g~~p~~~~~~~d~~~in~Gk~~~t~ 334 (481)
T 3k6m_A 260 DNVRERIIKRAALEFEDGMYANLGIGIPLLASNFI----SPNMTVH-LQSENGILGLGPYPLQNEVDADLINAGKETVTV 334 (481)
T ss_dssp --CHHHHHHHHGGGCCTTEEEEECTTHHHHHGGGC----CTTSCEE-EEETTTEEEECCCCCGGGCCTTCBCTTSBBCCE
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEccCHHHHHHhhh----ccCCcEE-EEECCcEeCCccCCCCCccCcccccCCCceEec
Confidence 34678999999999999986544 44223333333 2344332 34564 343211111112333442 2332
Q ss_pred -----EcchHHHHhc---ccCCEEEEcceeEeecCCeec
Q 016064 272 -----LIDSAVAYTM---DEVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 272 -----I~Dsav~~~m---~~vd~VlvGAd~V~~NG~v~n 302 (396)
+.|+.-.+-| +++|..|+||==|-.+|.+-|
T Consensus 335 ~~g~~~~~~~~~F~~~~gG~~Dv~ilga~qVD~~Gnvn~ 373 (481)
T 3k6m_A 335 LPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLAN 373 (481)
T ss_dssp EEEEEECCHHHHHHHHHTTCCSEEEECCSEEETTCCEEC
T ss_pred cccceecCCHHHeeeecCCCeEEEEechHhccCCCCccc
Confidence 3455554444 689999999999999998844
No 282
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=43.98 E-value=1.1e+02 Score=28.74 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=61.0
Q ss_pred ccCceEEeecChH-------HHHHHHHHHHHCC--CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE----cchHHHHh
Q 016064 214 FDGCTILVHGFSR-------VVMEVLKMAAQNK--KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL----IDSAVAYT 280 (396)
Q Consensus 214 ~dg~~ILT~~~S~-------~V~~~L~~A~~~g--k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI----~Dsav~~~ 280 (396)
.++.+|+..|+-. .+.+.+....+++ ..++++++-..|......+.+...+.| ++... ++..+..+
T Consensus 249 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~ 327 (439)
T 3fro_A 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVREL 327 (439)
T ss_dssp CSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHH
T ss_pred CCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHH
Confidence 4446777777643 2344444444444 678888876655322244444455667 66653 45668889
Q ss_pred cccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 281 MDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 281 m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
+..+|.+++-... .| .| ...+=|-.+|+||++-
T Consensus 328 ~~~adv~v~ps~~---e~-----~~--~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 328 YGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 360 (439)
T ss_dssp HTTCSEEEECBSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHCCEEEeCCCC---CC-----cc--HHHHHHHHCCCCeEEc
Confidence 9999999887542 11 22 3355677889999874
No 283
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=43.89 E-value=81 Score=30.11 Aligned_cols=102 Identities=11% Similarity=0.072 Sum_probs=54.9
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHH-hCCCCEEEEcch----------HHHHhcc
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELA-KLDVPVKLLIDS----------AVAYTMD 282 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~-~~GI~vtlI~Ds----------av~~~m~ 282 (396)
....+++|-|.+..+..++..+.+.|. +|++. +|.+.|... .+. ..|+++..++.. ++-..+.
T Consensus 107 ~~~~i~~~~G~~~ai~~~~~~~~~~gd--~Vl~~--~p~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 180 (428)
T 1iay_A 107 DPERVVMAGGATGANETIIFCLADPGD--AFLVP--SPYYPAFNR--DLRWRTGVQLIPIHCESSNNFKITSKAVKEAYE 180 (428)
T ss_dssp CTTSCEEEEHHHHHHHHHHHHHCCTTC--EEEEE--SSCCTTHHH--HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHH
T ss_pred ChhhEEEccChHHHHHHHHHHhCCCCC--eEEEc--cCCCcchHH--HHHHhcCCEEEEeecCCccCCcCCHHHHHHHHH
Confidence 345677887777776666655543343 56655 455655432 233 468877776521 2222332
Q ss_pred -------cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -------EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -------~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++. ..--..|.++.+---..++-.|+++++++++
T Consensus 181 ~~~~~~~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 181 NAQKSNIKVKGLILT-NPSNPLGTTLDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHTTCCEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHhcCCceEEEEEc-CCCCCCCCcCCHHHHHHHHHHHHHCCeEEEE
Confidence 34445442 2212235544432234567778899998876
No 284
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=43.85 E-value=36 Score=30.92 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=55.1
Q ss_pred cChHHHHHHHHHHHHC-CCeeEEE---EeCCC-CCchhHHHHHHHHhCCCCEEEEcchHHHHhccc--C----CEEEEcc
Q 016064 223 GFSRVVMEVLKMAAQN-KKLFRVL---CTEGR-PDRSGLRLANELAKLDVPVKLLIDSAVAYTMDE--V----DMVFVGA 291 (396)
Q Consensus 223 ~~S~~V~~~L~~A~~~-gk~f~Vi---V~Esr-P~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~--v----d~VlvGA 291 (396)
|.|..=.++|..+.-. |..|+|+ +.|+. +...-..++.+|+..+- .++..-+.. - +.+++||
T Consensus 16 S~SPrR~eLL~~~~~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA-------~av~~~~~~~~~~~~~~~~VIga 88 (207)
T 2amh_A 16 TSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFELTESIARAKM-------KAVLEKARQHSPPISGPAIALTF 88 (207)
T ss_dssp CCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCCSSHHHHHHHHHHHHH-------HHHHHHHHTC------CEEEEEE
T ss_pred cCCHHHHHHHHhhhhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-------HHHHHHhcccccccCCCCEEEEE
Confidence 4444444455554222 7789988 34442 33334566777765431 112222211 1 5689999
Q ss_pred eeEee-cCCeeccccHHHHH--HHhhhCCCcEEEe
Q 016064 292 DGVVE-SGGIINMMGTYQIA--LVAHSMNKPVYVA 323 (396)
Q Consensus 292 d~V~~-NG~v~nkiGT~~lA--l~Ak~~~vPvyV~ 323 (396)
|.|+. ||.++.|-.+..-| ++.+-.|...-|.
T Consensus 89 DTvV~~~g~IlgKP~~~e~A~~mL~~lsG~~h~v~ 123 (207)
T 2amh_A 89 DQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTV 123 (207)
T ss_dssp EEEEEETTEEECSCSSHHHHHHHHHHHTTSEEEEE
T ss_pred CeEEEECCEEcCCCCCHHHHHHHHHHhCCCcEEEE
Confidence 99986 99999999998766 4455556655443
No 285
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=43.83 E-value=82 Score=23.54 Aligned_cols=77 Identities=16% Similarity=0.005 Sum_probs=43.6
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+.. + ...|.|++..+- .+ .-|--.+..+.+...+|
T Consensus 3 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~~~~ 74 (121)
T 1zh2_A 3 NVLIVEDEQAI-RRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGL--PD-----GDGIEFIRDLRQWSAVP 74 (121)
T ss_dssp EEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHHCCSEEEEESEE--TT-----EEHHHHHHHHHTTCCCC
T ss_pred EEEEEeCCHHH-HHHHHHHHhcCCCEEEEeCCHHHHHHHHhcCCCCEEEEeCCC--CC-----CcHHHHHHHHHhCCCCc
Confidence 56677766543 33445667777777766655433222 1 357888886542 22 12433444444456789
Q ss_pred EEEecccc
Q 016064 320 VYVAAESY 327 (396)
Q Consensus 320 vyV~aes~ 327 (396)
+++++...
T Consensus 75 ii~~s~~~ 82 (121)
T 1zh2_A 75 VIVLSARS 82 (121)
T ss_dssp EEEEESCC
T ss_pred EEEEECCC
Confidence 99887543
No 286
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=43.77 E-value=57 Score=25.10 Aligned_cols=77 Identities=16% Similarity=0.062 Sum_probs=41.7
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh--
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS-- 315 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~-- 315 (396)
+.+|+|+|..|.. ...+...|. .|..|....+..-+.- + ...|.||+..+- .+ .-|.-.+..+-+.
T Consensus 4 ~~~ilivdd~~~~-~~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~~ 74 (133)
T 3nhm_A 4 KPKVLIVENSWTM-RETLRLLLS-GEFDCTTAADGASGLQQALAHPPDVLISDVNM--DG-----MDGYALCGHFRSEPT 74 (133)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHT-TTSEEEEESSHHHHHHHHHHSCCSEEEECSSC--SS-----SCHHHHHHHHHHSTT
T ss_pred CCEEEEEcCCHHH-HHHHHHHHh-CCcEEEEECCHHHHHHHHhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCCc
Confidence 3567777765543 222333444 6777766665433322 2 457888887543 21 2344444444442
Q ss_pred -CCCcEEEeccc
Q 016064 316 -MNKPVYVAAES 326 (396)
Q Consensus 316 -~~vPvyV~aes 326 (396)
.++|+++++..
T Consensus 75 ~~~~pii~~s~~ 86 (133)
T 3nhm_A 75 LKHIPVIFVSGY 86 (133)
T ss_dssp TTTCCEEEEESC
T ss_pred cCCCCEEEEeCC
Confidence 37999998864
No 287
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=43.42 E-value=72 Score=30.42 Aligned_cols=100 Identities=10% Similarity=0.003 Sum_probs=52.9
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HHHHhc-ccCC
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AVAYTM-DEVD 285 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av~~~m-~~vd 285 (396)
..+++|-|.+..+..++..+.+.| -+|++. .|.+.|...+ +...|.++..++.. .+...+ +++.
T Consensus 110 ~~v~~t~G~~~al~~~~~~l~~~g--d~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 183 (404)
T 2o1b_A 110 DEVCILYGTKNGLVAVPTCVINPG--DYVLLP--DPGYTDYLAG--VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTK 183 (404)
T ss_dssp TSEEEESSHHHHHHHHHHHHCCTT--CEEEEE--ESCCSSHHHH--HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEE
T ss_pred ccEEEcCCcHHHHHHHHHHhcCCC--CEEEEc--CCCchhHHHH--HHHCCCEEEEeccCcccCcCCHHHHHHhhccCce
Confidence 467777776666666665553333 356654 3555554432 34568777766521 111111 3445
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.|++. ..-...|.++..-==..++-+|+++++++++
T Consensus 184 ~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 184 LIYLT-YPNNPTGSTATKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred EEEEc-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 55553 2111234443321123577788999998776
No 288
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=43.38 E-value=45 Score=32.04 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=47.6
Q ss_pred CceEEeecChHHHHHHHHHHHHC----C--CeeEEEEeCCCCCchhHHH-HHHHHhCCC------------CEEEEcc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN----K--KLFRVLCTEGRPDRSGLRL-ANELAKLDV------------PVKLLID-- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~----g--k~f~ViV~EsrP~~eG~~l-a~~L~~~GI------------~vtlI~D-- 274 (396)
..+++|.|.|..+...|+.+.+. | .+-+|++.+ |.+.|... +..+..... ++..++.
T Consensus 90 ~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (430)
T 3i4j_A 90 FRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRV--PSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPD 167 (430)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TC-------------------------CGGGSCEECCCC
T ss_pred CEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEe--CCcCCCCcccccccCccccccccCCcCCCCCceEcCCCc
Confidence 46777877777787777766532 1 234566544 33444333 222221100 2333332
Q ss_pred ---------hHHHHhccc---CCEEEEcceeEee-cCCe-eccccH-HHHHHHhhhCCCcEEE
Q 016064 275 ---------SAVAYTMDE---VDMVFVGADGVVE-SGGI-INMMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 275 ---------sav~~~m~~---vd~VlvGAd~V~~-NG~v-~nkiGT-~~lAl~Ak~~~vPvyV 322 (396)
..+-..+.+ -+..++=.+.+.. +||+ .-.-+- ..++-+|+++++.+++
T Consensus 168 ~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 230 (430)
T 3i4j_A 168 PARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIA 230 (430)
T ss_dssp TTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred ccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 344444532 1222222244443 4443 334442 4577789999997765
No 289
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=43.19 E-value=27 Score=35.04 Aligned_cols=117 Identities=11% Similarity=-0.036 Sum_probs=57.4
Q ss_pred HHHh-hccccCceEEeecChHHHHHHHHHHHHC---CCeeEEEEe--CCCC---------------CchhHHHHHHHHhC
Q 016064 207 MLSQ-DFIFDGCTILVHGFSRVVMEVLKMAAQN---KKLFRVLCT--EGRP---------------DRSGLRLANELAKL 265 (396)
Q Consensus 207 ~~a~-~~I~dg~~ILT~~~S~~V~~~L~~A~~~---gk~f~ViV~--EsrP---------------~~eG~~la~~L~~~ 265 (396)
+.++ ++|+||++|...++.+.-..++....++ -+.++|+-. ...+ .+-|-.+. ++.+.
T Consensus 15 ~eAv~~~IkdG~tV~~ggf~g~P~~Li~AL~~~~~~~~dLtli~~~~~~~~~~~~~~l~~~i~~~~~~~g~~~r-~~i~~ 93 (439)
T 3d3u_A 15 DEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQREKLENITVFHMLYFGDAPHLAPEMRSHVHPTLNFLEGNSR-PASRD 93 (439)
T ss_dssp HHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTTTCCSEEEECSCBSSCCTTSSGGGTTTEEEEC--------------
T ss_pred HHHHHhhCCCcCEEEECcccChHHHHHHHHHHhhCCCCCEEEEEecCCCcchhccHHhCCcEEEEECCCChHHH-HHHHc
Confidence 4455 6899999999988865433444333332 267887732 1111 11122222 22333
Q ss_pred C-CCEEEEcchHHH-Hhc---ccCCEEEEcceeEeecCCeeccccHH-HHHHHhhhCCCcEEEeccc
Q 016064 266 D-VPVKLLIDSAVA-YTM---DEVDMVFVGADGVVESGGIINMMGTY-QIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 266 G-I~vtlI~Dsav~-~~m---~~vd~VlvGAd~V~~NG~v~nkiGT~-~lAl~Ak~~~vPvyV~aes 326 (396)
| +..+-+.-+.+. ++. -++|..|+.+...-++|.+.- |+. ..+.++.....-|+|-++.
T Consensus 94 G~~~~~P~~ls~~~~~l~~~~l~~DVAlI~as~~D~~Gnls~--g~s~~~~~~~~~aA~~VIveVn~ 158 (439)
T 3d3u_A 94 RRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSF--GVSCDYTKAAAECAPVVVAEVNK 158 (439)
T ss_dssp -------CCGGGHHHHHTTSSSCCSEEEEEEECCCTTSEEEC--TTBCBTHHHHHHHCSEEEEEEES
T ss_pred CCCeEECCCcchHHHHHHcCCCCCCEEEEEEecCCCCceEEE--eccccchHHHHhhCCeEEEEECC
Confidence 3 223323233343 444 258999999999999998754 432 2333334444556655443
No 290
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=43.00 E-value=83 Score=30.91 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=52.0
Q ss_pred eecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHH-HH-------HHHHhCCCCEEEEcc--------hHHHHhcc-c
Q 016064 221 VHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLR-LA-------NELAKLDVPVKLLID--------SAVAYTMD-E 283 (396)
Q Consensus 221 T~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~-la-------~~L~~~GI~vtlI~D--------sav~~~m~-~ 283 (396)
|.|.+..+..+|....+.| -+|++.+ .|.+.+.. +. ..|...|+.+..++. .++...+. +
T Consensus 83 ~~sGt~Ai~~al~all~~G--D~Vl~~~-~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~ 159 (409)
T 3jzl_A 83 IISGTHAISTVLFGILRPD--DELLYIT-GQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK 159 (409)
T ss_dssp SCSHHHHHHHHHHHHCCTT--CEEEECS-SSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT
T ss_pred CccHHHHHHHHHHHhcCCC--CEEEEeC-CCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC
Confidence 4444444544554443334 3666665 34444433 33 456778998888753 33444443 3
Q ss_pred CCEEEEcceeEeecCCeeccccHH----HHHHHhhh--CCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTY----QIALVAHS--MNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~----~lAl~Ak~--~~vPvyV 322 (396)
..+|++.. .-|..-|..|+. .++-+|++ ++++++|
T Consensus 160 tklV~i~~----s~g~p~nptg~v~~l~~I~~la~~~~~~~~liv 200 (409)
T 3jzl_A 160 TKMIGIQR----SRGYADRPSFTIEKIKEMIVFVKNINPEVIVFV 200 (409)
T ss_dssp EEEEEEEC----SCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CeEEEEEC----CCCCCCCCcCccccHHHHHHHHHhhCCCCEEEE
Confidence 33443321 123366666764 46777888 8998887
No 291
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=42.96 E-value=2e+02 Score=27.74 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=57.1
Q ss_pred eEEeecChHHHHHHHHHHHH--------CC---CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HH
Q 016064 218 TILVHGFSRVVMEVLKMAAQ--------NK---KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AV 277 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~--------~g---k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av 277 (396)
.++|-|.|..+...+..+.. .| .+-+|++.+ .. ....+.+...|+++..++-. ++
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~---~h--~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 180 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP---VQ--ICWHKFARYWDVELREIPMRPGQLFMDPKRM 180 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS---CC--HHHHHHHHHTTCEEEECCCBTTBCSCCHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC---Cc--HHHHHHHHHcCceEEEEecCCCCCeECHHHH
Confidence 67777777766655554432 35 234777765 22 23345556679988887632 23
Q ss_pred HHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhC------CCcEEE
Q 016064 278 AYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSM------NKPVYV 322 (396)
Q Consensus 278 ~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~------~vPvyV 322 (396)
-..+.+-+++|+....-...|.+. . -..++-+|+++ +++++|
T Consensus 181 ~~~i~~~t~~v~~~~~~n~tG~~~-~--l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 181 IEACDENTIGVVPTFGVTYTGNYE-F--PQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HHHCCTTEEEEECBBSCTTTCBBC-C--HHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHhhCCEEEEEEcCCcCCcccC-C--HHHHHHHHHHHhhccCCCCcEEE
Confidence 344444356666665555566553 2 24567777774 899887
No 292
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=42.93 E-value=62 Score=30.69 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=15.9
Q ss_pred HHHHHhhhCCCcEEEeccccc
Q 016064 308 QIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 308 ~lAl~Ak~~~vPvyV~aes~K 328 (396)
...++|+..++|++.....+-
T Consensus 131 ~~~~aA~~~giP~v~~~~~~~ 151 (415)
T 3rsc_A 131 AGQLLAARWRRPAVRLSAAFA 151 (415)
T ss_dssp HHHHHHHHTTCCEEEEESSCC
T ss_pred HHHHHHHHhCCCEEEEEeccc
Confidence 346778999999998875543
No 293
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=42.92 E-value=1.1e+02 Score=28.17 Aligned_cols=69 Identities=16% Similarity=0.072 Sum_probs=41.7
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE---EcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL---LIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl---I~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
...+++++.. .|..+=.+.++++.+..-.|++ +....+..+|..+|.+++.+ |+. .+=|-.
T Consensus 236 ~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-------------g~~--~lEA~a 299 (375)
T 3beo_A 236 HEDVQVVYPV-HMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-------------GGV--QEEAPS 299 (375)
T ss_dssp CTTEEEEEEC-CSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-------------HHH--HHHHHH
T ss_pred CCCeEEEEeC-CCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-------------CCh--HHHHHh
Confidence 4457766643 3432113344444322125777 55557888999999997643 333 455777
Q ss_pred CCCcEEEe
Q 016064 316 MNKPVYVA 323 (396)
Q Consensus 316 ~~vPvyV~ 323 (396)
+|+||++.
T Consensus 300 ~G~Pvi~~ 307 (375)
T 3beo_A 300 LGVPVLVL 307 (375)
T ss_dssp HTCCEEEC
T ss_pred cCCCEEEe
Confidence 89999876
No 294
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=42.92 E-value=1.2e+02 Score=28.43 Aligned_cols=101 Identities=9% Similarity=0.039 Sum_probs=53.7
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-----------hHHHHhcc-
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-----------SAVAYTMD- 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-----------sav~~~m~- 282 (396)
...+++|.|.+..+..+++.+.+.| -+|++. .|.+.|... .+...|.++..++- ..+-..+.
T Consensus 87 ~~~v~~t~g~~~al~~~~~~l~~~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 160 (390)
T 1d2f_A 87 SQTVVYGPSVIYMVSELIRQWSETG--EGVVIH--TPAYDAFYK--AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160 (390)
T ss_dssp GGGEEEESCHHHHHHHHHHHSSCTT--CEEEEE--ESCCHHHHH--HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCC--CEEEEc--CCCcHHHHH--HHHHCCCEEEEeecccCCCccccCHHHHHHHhcc
Confidence 3457777766666666665543333 355553 356666543 33456777666541 12333343
Q ss_pred -cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 -EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++. ..-...|.+...-=-..++-+|+++++++++
T Consensus 161 ~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 161 PECKIMLLC-SPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TTEEEEEEE-SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 44455542 2212234444332234567788999998876
No 295
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=42.66 E-value=1.3e+02 Score=27.30 Aligned_cols=97 Identities=9% Similarity=0.022 Sum_probs=53.5
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHH-HHH-HHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANE-LAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~l-a~~-L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++.+.+..+..++..+.+.| -+|++. .|.+.+... ... +...|+++..++. ..+-..+. +...|++
T Consensus 15 ~~i~~~sG~~a~~~~~~~~~~~g--~~v~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~- 89 (331)
T 1pff_A 15 ACAATASGMGAIAASVWTFLKAG--DHLISD--DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYF- 89 (331)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEE-
T ss_pred eEEEeCChHHHHHHHHHHhcCCC--CEEEEc--CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEE-
Confidence 55555555555555554443334 456665 355655432 333 4568999888762 33444443 3444444
Q ss_pred ceeEe-ecCCeeccccHHHHHHHhhh-CCCcEEE
Q 016064 291 ADGVV-ESGGIINMMGTYQIALVAHS-MNKPVYV 322 (396)
Q Consensus 291 Ad~V~-~NG~v~nkiGT~~lAl~Ak~-~~vPvyV 322 (396)
..+. ..|.+.. -..++-+|++ +++++++
T Consensus 90 -~~~~nptG~~~~---~~~i~~~~~~~~~~~li~ 119 (331)
T 1pff_A 90 -ETPANPTLKVID---IEDAVKQARKQKDILVIV 119 (331)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHTTSSSCEEEE
T ss_pred -ECCCCCcCcccC---HHHHHHHHhhhcCCEEEE
Confidence 2222 2344442 4567888999 9998876
No 296
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=42.64 E-value=35 Score=31.50 Aligned_cols=90 Identities=27% Similarity=0.178 Sum_probs=55.0
Q ss_pred cChHHHHHHHHHHHHCCCeeEEEE---eCCCCCch---hHHHHHHHHhCCCCEEEEcchHHHHhcc----cCCEEEEcce
Q 016064 223 GFSRVVMEVLKMAAQNKKLFRVLC---TEGRPDRS---GLRLANELAKLDVPVKLLIDSAVAYTMD----EVDMVFVGAD 292 (396)
Q Consensus 223 ~~S~~V~~~L~~A~~~gk~f~ViV---~EsrP~~e---G~~la~~L~~~GI~vtlI~Dsav~~~m~----~vd~VlvGAd 292 (396)
|.|..=.++|..+ |-.|+|+. -|+....+ -..++.+|+..+- .+++.-+. .-+.+++|||
T Consensus 10 S~SPrR~eLL~~~---Gi~f~v~~~~iDE~~~~~~~~~p~~~v~~lA~~KA-------~av~~~~~~~~~~~~~~VIgaD 79 (230)
T 2p5x_A 10 SASPRRQEILSNA---GLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKA-------LEVANRLYQKDLRAPDVVIGAD 79 (230)
T ss_dssp CCCHHHHHHHHHT---TCCCEECCCCCCCCCCGGGSSSHHHHHHHHHHHHH-------HHHHHHHHHHHSCCCSEEEEEE
T ss_pred CCCHHHHHHHHHC---CCCeEEeCCCCCCCCCccccCCHHHHHHHHHHHHH-------HHHHHHhhhhccCCCCEEEEeC
Confidence 4455444556544 88999984 35533332 4567777776541 11222221 2245899999
Q ss_pred eEee-cCCeeccccHHHHH--HHhhhCCCcEEE
Q 016064 293 GVVE-SGGIINMMGTYQIA--LVAHSMNKPVYV 322 (396)
Q Consensus 293 ~V~~-NG~v~nkiGT~~lA--l~Ak~~~vPvyV 322 (396)
.|+. ||.++.|-.+..-| ++.+-.|...-|
T Consensus 80 TvV~~dg~IlgKP~d~eeA~~mL~~lSG~~h~V 112 (230)
T 2p5x_A 80 TIVTVGGLILEKPVDKQDAYRMLSRLSGREHSV 112 (230)
T ss_dssp EEEEETTEEECCCSSHHHHHHHHHHHTTSEEEE
T ss_pred eEEEECCEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 9986 99999999998766 444445555433
No 297
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=42.55 E-value=53 Score=26.59 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=48.4
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEE-EEcchHHHH-hc--c--cCCEEEEcceeEeecCCeeccccHHHHHHH
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVK-LLIDSAVAY-TM--D--EVDMVFVGADGVVESGGIINMMGTYQIALV 312 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vt-lI~Dsav~~-~m--~--~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~ 312 (396)
+..++|+|+|..|.. ...+...|.+.|+.|. ...+..-+. .+ . ..|.||+..+- .+ .-|--.+..+
T Consensus 34 ~~~~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l--~~-----~~g~~~~~~l 105 (157)
T 3hzh_A 34 GIPFNVLIVDDSVFT-VKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITM--PK-----MDGITCLSNI 105 (157)
T ss_dssp TEECEEEEECSCHHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSC--SS-----SCHHHHHHHH
T ss_pred CCceEEEEEeCCHHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccC--CC-----ccHHHHHHHH
Confidence 456788888887643 4455677888898876 444432222 22 2 67999887643 21 2233333333
Q ss_pred hh-hCCCcEEEecccc
Q 016064 313 AH-SMNKPVYVAAESY 327 (396)
Q Consensus 313 Ak-~~~vPvyV~aes~ 327 (396)
-+ ..++|+++++...
T Consensus 106 r~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 106 MEFDKNARVIMISALG 121 (157)
T ss_dssp HHHCTTCCEEEEESCC
T ss_pred HhhCCCCcEEEEeccC
Confidence 33 4579999988643
No 298
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=42.54 E-value=55 Score=31.54 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=47.0
Q ss_pred ccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc---c-hHHHHhcccCCEE
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI---D-SAVAYTMDEVDMV 287 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~---D-sav~~~m~~vd~V 287 (396)
.+..+.+|+..|.+..-..+.+.|++.| ++|++++..|...+..++. -.++. | .++..+.+++|.|
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG--~~viv~d~~~~~p~~~~ad--------~~~~~~~~d~~~l~~~~~~~dvi 77 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMG--YKVVVLDPSEDCPCRYVAH--------EFIQAKYDDEKALNQLGQKCDVI 77 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTGGGSS--------EEEECCTTCHHHHHHHHHHCSEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCChhhhhCC--------EEEECCCCCHHHHHHHHHhCCcc
Confidence 3557889999999998888888888766 5777777766544333321 12221 2 3455556778888
Q ss_pred EEcceeE
Q 016064 288 FVGADGV 294 (396)
Q Consensus 288 lvGAd~V 294 (396)
..+-+.+
T Consensus 78 ~~~~E~~ 84 (377)
T 3orq_A 78 TYEFENI 84 (377)
T ss_dssp EESSTTS
T ss_pred eeccccc
Confidence 7765433
No 299
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=42.45 E-value=14 Score=35.72 Aligned_cols=107 Identities=11% Similarity=0.131 Sum_probs=56.0
Q ss_pred ccCceEEeecChHHHHHHHHHHHHCCC------------eeEEEEeCCCCCchhHHHH----HHHHhCCCCEEEEc----
Q 016064 214 FDGCTILVHGFSRVVMEVLKMAAQNKK------------LFRVLCTEGRPDRSGLRLA----NELAKLDVPVKLLI---- 273 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A~~~gk------------~f~ViV~EsrP~~eG~~la----~~L~~~GI~vtlI~---- 273 (396)
....+++|-|.+..+..++..+.+.|. .-+|+++++ |.+.+...+ ..+...|..+..++
T Consensus 105 ~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (444)
T 3if2_A 105 TSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLT-PEYIGYSDVHVEGQHFAAVLPHIDEVTHDGE 183 (444)
T ss_dssp CGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSS-SCCGGGTTCCSSSCCEEECCCEEEEEEETTE
T ss_pred CHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCC-CCccchhhcccccchhhccCceEEecccccc
Confidence 445688887766666655554433232 015666543 444443321 13556777766555
Q ss_pred --------c-hHHHHh---c-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 274 --------D-SAVAYT---M-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 --------D-sav~~~---m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
| .++-.. + +++.+|++. ..--..|.+...--=..++-+|+++++++++
T Consensus 184 ~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 184 EGFFKYRVDFEALENLPALKEGRIGAICCS-RPTNPTGNVLTDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp EEEEEEECCHHHHHTCHHHHTTCEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCccccCCCHHHHHHHHHhcCCCceEEEeC-CCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 2 122222 2 334445442 1112345555444455677789999999887
No 300
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=42.45 E-value=2.1e+02 Score=26.51 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=52.9
Q ss_pred CceEEeecChHHHHHHHHHHH----HCCCeeEEEEeCCCCCchhH-HHHHHHHhCCCCEEEEcch--------HHHHhcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAA----QNKKLFRVLCTEGRPDRSGL-RLANELAKLDVPVKLLIDS--------AVAYTMD 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~----~~gk~f~ViV~EsrP~~eG~-~la~~L~~~GI~vtlI~Ds--------av~~~m~ 282 (396)
..+++|-|.+..+..++..+. +.|. .+|++.+ |...+. .....+...|.++..++.. .+-..+.
T Consensus 81 ~~v~~~~g~t~al~~~~~~l~~~~~~~gd-~~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 157 (400)
T 3vax_A 81 DELIFTSGATESNNIALLGLAPYGERTGR-RHIITSA--IEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR 157 (400)
T ss_dssp GGEEEESCHHHHHHHHHHTTHHHHHHHTC-CEEEEET--TSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC
T ss_pred CcEEEeCCHHHHHHHHHHHHHHhhccCCC-CEEEECc--cccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC
Confidence 356777666666655555443 3343 1566653 223332 2244456679988888632 2222333
Q ss_pred cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+-.++++=...-...|.+.. -..++-+|+++++++++
T Consensus 158 ~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 158 PDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHV 194 (400)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEE
T ss_pred CCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEE
Confidence 22233332222222344433 25688889999998876
No 301
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=42.42 E-value=1.7e+02 Score=28.01 Aligned_cols=100 Identities=14% Similarity=0.149 Sum_probs=52.0
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------hHHHHhcc-------
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------SAVAYTMD------- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------sav~~~m~------- 282 (396)
.+++|.|.+..+..++....+.| -+|++. .|.+.|.. ..+...|.++..++. ..+-..+.
T Consensus 110 ~i~~t~G~~~al~~~~~~l~~~g--d~Vlv~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~ 183 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMIINPG--DNVLLD--EPAYSGTL--QSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDA 183 (425)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SSCCHHHH--HHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTS
T ss_pred cEEEeCcHHHHHHHHHHHhCCCC--CEEEEe--CCCcHHHH--HHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhcccc
Confidence 56677666666665555543334 355554 36666644 334567887777652 23433443
Q ss_pred ------cCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 283 ------EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 283 ------~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++..|++-..--...|.++..-==..++-+|+++++.+++
T Consensus 184 ~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 184 KNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp SSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2333333211112234444332223677788999987665
No 302
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=42.25 E-value=42 Score=26.52 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=48.5
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCC-CCEEEEcchHHHH-hc----ccCCEEEEcceeEeecCCeeccccHHHHHHH
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLD-VPVKLLIDSAVAY-TM----DEVDMVFVGADGVVESGGIINMMGTYQIALV 312 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~G-I~vtlI~Dsav~~-~m----~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~ 312 (396)
.+..+|+|+|..|.. ...+...|.+.| +.|....+..-+. .+ ...|.||+..+- .+ .-|-..+..+
T Consensus 18 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l 89 (146)
T 4dad_A 18 QGMINILVASEDASR-LAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGAA--LD-----TAELAAIEKL 89 (146)
T ss_dssp GGGCEEEEECSCHHH-HHHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECTT--CC-----HHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHH-HHHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCCC--CC-----ccHHHHHHHH
Confidence 456788888876653 344566777778 8888777655222 22 467888886542 21 2233333333
Q ss_pred hh-hCCCcEEEecccc
Q 016064 313 AH-SMNKPVYVAAESY 327 (396)
Q Consensus 313 Ak-~~~vPvyV~aes~ 327 (396)
-+ ..++|+++++...
T Consensus 90 ~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 90 SRLHPGLTCLLVTTDA 105 (146)
T ss_dssp HHHCTTCEEEEEESCC
T ss_pred HHhCCCCcEEEEeCCC
Confidence 33 3578999987643
No 303
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=42.13 E-value=36 Score=30.77 Aligned_cols=99 Identities=17% Similarity=0.082 Sum_probs=56.9
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhcccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTMDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m~~vd~VlvG 290 (396)
+.+||..|-|+-+-..|.+... .+..+|+++.-.+.... +-.+..+. | .++..++.++|.||--
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~-~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLA-PMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTG-GGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 3577777877766555544332 22367777665443211 22333322 2 4566667777766654
Q ss_pred ceeEeecCC-----eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 291 ADGVVESGG-----IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 291 Ad~V~~NG~-----v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-. ..... -+|-.||+.+.-+|+..+++-+|...|
T Consensus 72 Ag~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 72 GGI-SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CSC-CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 422 11111 257889999999999998766665444
No 304
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=42.12 E-value=1.2e+02 Score=28.75 Aligned_cols=100 Identities=12% Similarity=0.025 Sum_probs=56.1
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhcc-----
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTMD----- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m~----- 282 (396)
.+++|.|.+..+..++....+.| -+|++.+ |.+.+... .+...|.++..++- ..+-..+.
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~g--d~Vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 177 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPG--DEVLTAD--WYWGAYRV--ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAK 177 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTT--CEEEEES--SCCTHHHH--HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEECCchHHHHHHHHHHhcCCC--CEEEECC--CCchhHHH--HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhcc
Confidence 56777766666666665443334 3566654 66655543 34567888777752 12323333
Q ss_pred cCC-EEEEcceeEeecCCeeccccHHHHHHHhh------hCCCcEEE
Q 016064 283 EVD-MVFVGADGVVESGGIINMMGTYQIALVAH------SMNKPVYV 322 (396)
Q Consensus 283 ~vd-~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak------~~~vPvyV 322 (396)
+.. .+++-.-+--..|.++..-.-..++-+|+ ++++.+++
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 344 33332111244577777666667777777 67776665
No 305
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=42.08 E-value=1.9e+02 Score=26.82 Aligned_cols=96 Identities=10% Similarity=0.047 Sum_probs=53.0
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hHHHHhcc-------cCCE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SAVAYTMD-------EVDM 286 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sav~~~m~-------~vd~ 286 (396)
+.|++-+.|..+..++....+ +.-+|++. .|.+.+ ....+...|.++..++. ..+-..+. ++.+
T Consensus 105 ~~i~~~sGt~a~~~~l~~~~~--~gd~v~~~--~~~~~~--~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 105 DTILYSSCFDANGGLFETLLG--PEDAIISD--ELNHAS--IIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp EEEEESCHHHHHHTTHHHHCC--TTCEEEEE--TTCCHH--HHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEE
T ss_pred cEEEECchHHHHHHHHHHhcC--CCCEEEEC--CcccHH--HHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceE
Confidence 455555545555555544432 23345543 355544 33456667888877752 34444443 4555
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++.. .-...|.+.. --.++-+|+++++++++
T Consensus 179 v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 179 IATDG-VFSMDGIIAD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp EEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 55543 2233444444 45788889999998876
No 306
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=42.01 E-value=72 Score=23.96 Aligned_cols=76 Identities=18% Similarity=0.136 Sum_probs=42.8
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHh-hhCCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVA-HSMNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~A-k~~~v 318 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+.- + ...|.+++..+ +.++ -|--.+..+- +..++
T Consensus 2 ~ilivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~dlil~D~~--l~~~-----~g~~~~~~l~~~~~~~ 73 (121)
T 2pl1_A 2 RVLVVEDNALL-RHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLG--LPDE-----DGLSLIRRWRSNDVSL 73 (121)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEECSC--CSSS-----CHHHHHHHHHHTTCCS
T ss_pred eEEEEeCcHHH-HHHHHHHHhhcCCEEEEeCCHHHHHHHHhccCCCEEEEecC--CCCC-----CHHHHHHHHHhcCCCC
Confidence 56677766532 34456667778888776666433322 2 35788888654 2221 2332233332 23578
Q ss_pred cEEEeccc
Q 016064 319 PVYVAAES 326 (396)
Q Consensus 319 PvyV~aes 326 (396)
|+++++..
T Consensus 74 ~ii~~s~~ 81 (121)
T 2pl1_A 74 PILVLTAR 81 (121)
T ss_dssp CEEEEESC
T ss_pred CEEEEecC
Confidence 99988754
No 307
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=42.01 E-value=2e+02 Score=26.12 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=56.2
Q ss_pred ceEEeecChHHHHHHHHH----HHHCCCeeEEE-EeCCCCCc------------hhHH-H---HHHHHh--CCCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKM----AAQNKKLFRVL-CTEGRPDR------------SGLR-L---ANELAK--LDVPVKLLI 273 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~----A~~~gk~f~Vi-V~EsrP~~------------eG~~-l---a~~L~~--~GI~vtlI~ 273 (396)
.+++-+..|..-...|.. |...+-.+.++ |.+..+.. +..+ + ...|.+ .|++++...
T Consensus 173 ~Ilv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 252 (309)
T 3cis_A 173 PVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVV 252 (309)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEESCSSCCTTCSSCCHHHHHHHHHHHHHHHHTTHHHHCTTSCEEEEE
T ss_pred eEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEEEeecccccCCCcccHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 345556666554444433 33446667766 55543321 1111 1 222333 488876533
Q ss_pred -c----hHHHHhcccCCEEEEcceeEeecCCeecc-ccHHHHHHHhhhCCCcEEEecc
Q 016064 274 -D----SAVAYTMDEVDMVFVGADGVVESGGIINM-MGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 274 -D----sav~~~m~~vd~VlvGAd~V~~NG~v~nk-iGT~~lAl~Ak~~~vPvyV~ae 325 (396)
. .++..+..++|++++|+.+- |++-.. .|+..-.++ ++..+||+|+-+
T Consensus 253 ~~g~~~~~I~~~a~~adliV~G~~~~---~~~~~~l~Gsv~~~vl-~~~~~pVlvv~~ 306 (309)
T 3cis_A 253 VRDQPARQLVQRSEEAQLVVVGSRGR---GGYAGMLVGSVGETVA-QLARTPVIVARE 306 (309)
T ss_dssp ESSCHHHHHHHHHTTCSEEEEESSCS---SCCTTCSSCHHHHHHH-HHCSSCEEEECC
T ss_pred EcCCHHHHHHHhhCCCCEEEECCCCC---CCccccccCcHHHHHH-hcCCCCEEEeCC
Confidence 1 23333336899999999752 233222 476655554 667899999854
No 308
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=41.94 E-value=40 Score=30.36 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=19.9
Q ss_pred eccccHHHHHHHhhhCCCcEEEeccc
Q 016064 301 INMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 301 ~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.|-.||..++-+|+.++++|+.+...
T Consensus 82 ~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 82 INAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 45678999999999999886655543
No 309
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=41.91 E-value=1e+02 Score=28.37 Aligned_cols=109 Identities=14% Similarity=0.030 Sum_probs=54.0
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCc-----hhHHHHHHHH---hCCCCEEEE--cc-hHHHHhcc-
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDR-----SGLRLANELA---KLDVPVKLL--ID-SAVAYTMD- 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~-----eG~~la~~L~---~~GI~vtlI--~D-sav~~~m~- 282 (396)
+.+||..|-|+-+-..| +.+.++| .+|+++...+.. +....+..|. ..++.+... .| .++..++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAG--YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT--CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 35788888877665544 3444445 466665422211 0112233333 234432221 22 34555555
Q ss_pred -cCCEEEEcceeEeec--------CCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 283 -EVDMVFVGADGVVES--------GGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 283 -~vd~VlvGAd~V~~N--------G~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
++|.||--|-..... ---+|-.||..++-+|+..+++-+|.+.+
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 455554433211000 00125678999999999888876665544
No 310
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=41.60 E-value=1e+02 Score=30.00 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=55.0
Q ss_pred CceEEeecChHHHHHHHHHHHHC----C--CeeEEEEeCCCCCchhHHH-HHHHHhC----------CCCEEEEc-----
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN----K--KLFRVLCTEGRPDRSGLRL-ANELAKL----------DVPVKLLI----- 273 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~----g--k~f~ViV~EsrP~~eG~~l-a~~L~~~----------GI~vtlI~----- 273 (396)
..+++|.|.|..++..|+.+.+- | .+-+|++.+ |.+.|..+ +..+... .-.+..++
T Consensus 112 ~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 189 (459)
T 4a6r_A 112 DRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRW--NGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWY 189 (459)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEET--TCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHH
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEC--CCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccc
Confidence 35777777788888888777641 1 234566554 23444333 3333211 11344444
Q ss_pred ------c---------hHHHHhccc---CCEEEEcceeEeecCCeec-cccH-HHHHHHhhhCCCcEEE
Q 016064 274 ------D---------SAVAYTMDE---VDMVFVGADGVVESGGIIN-MMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 ------D---------sav~~~m~~---vd~VlvGAd~V~~NG~v~n-kiGT-~~lAl~Ak~~~vPvyV 322 (396)
| ..+-..+.+ -+..++=.+.+..+||++. .-+- -.++-+|++|++.+++
T Consensus 190 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~ 258 (459)
T 4a6r_A 190 KHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVA 258 (459)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 223333321 1223333355777776654 4443 3467789999997765
No 311
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=41.56 E-value=63 Score=32.17 Aligned_cols=111 Identities=15% Similarity=0.035 Sum_probs=60.7
Q ss_pred ccCceEEeecChHHHHHHHH-HHHHCCC-eeEEEEeCCCCCchhHHHHHHH------------------HhCCCCEEEEc
Q 016064 214 FDGCTILVHGFSRVVMEVLK-MAAQNKK-LFRVLCTEGRPDRSGLRLANEL------------------AKLDVPVKLLI 273 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~-~A~~~gk-~f~ViV~EsrP~~eG~~la~~L------------------~~~GI~vtlI~ 273 (396)
..+.+||..|-++.+-..|. ...+.+. ..+|+++.-++..+ ....+| ...++.+....
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE--DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH--HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH--HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 35778999998887655443 3334322 36888776554422 111111 11344333221
Q ss_pred c---------hHHHHhcccCCEEEEcceeEeec----CCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 274 D---------SAVAYTMDEVDMVFVGADGVVES----GGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 274 D---------sav~~~m~~vd~VlvGAd~V~~N----G~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
. ..+..++.++|.||--|-.+-.. .--.|-.||..++-+|+..++.-+|...+
T Consensus 149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred CCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 1 24566677788777654222110 01147789999999999999744444433
No 312
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=41.52 E-value=88 Score=24.09 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=44.1
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCC-EEEEcchHHHH-hc---ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVP-VKLLIDSAVAY-TM---DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~-vtlI~Dsav~~-~m---~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
..+|+++|..|.. ...+...|.+.|.. |....+..-+. .+ ...|.||+..+ +++ .-|.-.+..+-+.
T Consensus 5 ~~~iLivdd~~~~-~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~--~p~-----~~g~~~~~~lr~~ 76 (129)
T 3h1g_A 5 SMKLLVVDDSSTM-RRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWN--MPE-----MNGLDLVKKVRSD 76 (129)
T ss_dssp -CCEEEECSCHHH-HHHHHHHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSC--CSS-----SCHHHHHHHHHTS
T ss_pred CcEEEEEeCCHHH-HHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCC--CCC-----CCHHHHHHHHHhc
Confidence 4578888876643 34556778888885 55554433222 12 25788887543 232 2244333333322
Q ss_pred ---CCCcEEEeccc
Q 016064 316 ---MNKPVYVAAES 326 (396)
Q Consensus 316 ---~~vPvyV~aes 326 (396)
.++|+++++..
T Consensus 77 ~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 77 SRFKEIPIIMITAE 90 (129)
T ss_dssp TTCTTCCEEEEESC
T ss_pred CCCCCCeEEEEeCC
Confidence 46899998864
No 313
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=41.43 E-value=64 Score=30.17 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=15.8
Q ss_pred HHHHHhhhCCCcEEEeccccc
Q 016064 308 QIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 308 ~lAl~Ak~~~vPvyV~aes~K 328 (396)
...++|+..++|++.....+-
T Consensus 115 ~~~~aA~~~giP~v~~~~~~~ 135 (402)
T 3ia7_A 115 AGRLLAARWDRPAVRLTGGFA 135 (402)
T ss_dssp HHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHhhCCCEEEEecccc
Confidence 356778999999998875443
No 314
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=41.39 E-value=58 Score=25.41 Aligned_cols=80 Identities=11% Similarity=0.139 Sum_probs=46.2
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCC--CEEEEcchHHH--Hhc-------ccCCEEEEcceeEeecCCeeccccHHH
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDV--PVKLLIDSAVA--YTM-------DEVDMVFVGADGVVESGGIINMMGTYQ 308 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI--~vtlI~Dsav~--~~m-------~~vd~VlvGAd~V~~NG~v~nkiGT~~ 308 (396)
+..+|+|+|..|.. ...+...|.+.|. .|....+..-+ .+- ...|.||+..+- . ..-|--.
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l--~-----~~~g~~~ 77 (143)
T 2qvg_A 6 DKVDILYLEDDEVD-IQSVERVFHKISSLIKIEIAKSGNQALDMLYGRNKENKIHPKLILLDINI--P-----KMNGIEF 77 (143)
T ss_dssp -CCSEEEECCCHHH-HHHHHHHHHHHCTTCCEEEESSHHHHHHHHHTCTTCCCCCCSEEEEETTC--T-----TSCHHHH
T ss_pred CCCeEEEEeCCHHH-HHHHHHHHHHhCCCceEEEECCHHHHHHHHHhcccccCCCCCEEEEecCC--C-----CCCHHHH
Confidence 34567777776543 4455667777776 67766654332 222 357888887542 1 1234444
Q ss_pred HHHHhhh---CCCcEEEecccc
Q 016064 309 IALVAHS---MNKPVYVAAESY 327 (396)
Q Consensus 309 lAl~Ak~---~~vPvyV~aes~ 327 (396)
+..+.+. .++|+++++...
T Consensus 78 ~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 78 LKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp HHHHTTSGGGTTCEEEEEESCC
T ss_pred HHHHHcCccccCCcEEEEeCCC
Confidence 4444444 478999987653
No 315
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=41.17 E-value=1.1e+02 Score=28.79 Aligned_cols=101 Identities=9% Similarity=0.019 Sum_probs=53.5
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----------HHHHhcc-c
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----------AVAYTMD-E 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----------av~~~m~-~ 283 (396)
...+++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|.++..++.. .+-..+. +
T Consensus 101 ~~~v~~~~g~t~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 174 (389)
T 1o4s_A 101 PDQVVVTNGAKQALFNAFMALLDPG--DEVIVFS--PVWVSYIP--QIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK 174 (389)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT
T ss_pred HHHEEEecCHHHHHHHHHHHhCCCC--CEEEEcC--CCchhHHH--HHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC
Confidence 3467777776766666665553334 3566554 44444432 345578887776521 2222232 3
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++ ...--..|.++.+---..++-+|+++++++++
T Consensus 175 ~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 175 TKAVLI-NSPNNPTGVVYRREFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp EEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 333443 11111234444333334677788999998876
No 316
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=41.13 E-value=1.6e+02 Score=27.14 Aligned_cols=98 Identities=12% Similarity=0.073 Sum_probs=51.8
Q ss_pred ceEEeecC-hHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch--------HHHHhc-ccCCE
Q 016064 217 CTILVHGF-SRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS--------AVAYTM-DEVDM 286 (396)
Q Consensus 217 ~~ILT~~~-S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds--------av~~~m-~~vd~ 286 (396)
++|+..+. +..+..+++.+.+.|. +|++.+ |..-|..+...+...|+++..++.. .+-..+ +++..
T Consensus 72 ~~i~~~~ggt~al~~~~~~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~ 147 (376)
T 3f0h_A 72 KAVFMTCSSTGSMEAVVMNCFTKKD--KVLVID--GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTG 147 (376)
T ss_dssp EEEEESSCHHHHHHHHHHHHCCTTC--CEEEEE--SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCE
T ss_pred eEEEEcCChhHHHHHHHHhccCCCC--eEEEEe--CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceE
Confidence 44553333 4445555544433343 555553 2233455555666779888877521 222222 34445
Q ss_pred EEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 287 VFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 287 VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|++.. .=...|.+.. -..++-+|+++++++++
T Consensus 148 v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 179 (376)
T 3f0h_A 148 LLVNV-DETSTAVLYD---TMMIGEFCKKNNMFFVC 179 (376)
T ss_dssp EEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEec-ccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 54431 1123444443 55688889999998887
No 317
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=41.10 E-value=95 Score=28.34 Aligned_cols=53 Identities=23% Similarity=0.169 Sum_probs=30.4
Q ss_pred eEEee--cChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 218 TILVH--GFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 218 ~ILT~--~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
+|+.+ |..+....+|....+....++|. |+-.+|...|.+.| .+.|||+..+.
T Consensus 24 rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A---~~~gIp~~~~~ 79 (229)
T 3auf_A 24 RIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERA---RRAGVDALHMD 79 (229)
T ss_dssp EEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHH---HHTTCEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHH---HHcCCCEEEEC
Confidence 44444 66666666665544432245554 33345666565544 56799998765
No 318
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=40.76 E-value=1.8e+02 Score=26.23 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=27.2
Q ss_pred ccCCEEEEcceeEeecCCeec-cccHHHHHHHhhhCCCcEEEeccc
Q 016064 282 DEVDMVFVGADGVVESGGIIN-MMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v~n-kiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.++|++++|+.+- |++-. -.|+-.-.+ .++..+||+|+=+.
T Consensus 236 ~~~dLiVmG~~g~---~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~~ 277 (290)
T 3mt0_A 236 LDAVVTVIGTVAR---TGLSGALIGNTAEVV-LDTLESDVLVLKPD 277 (290)
T ss_dssp HTCSEEEEECCSS---CCGGGCCSCHHHHHH-HTTCSSEEEEECCH
T ss_pred cCCCEEEECCCCC---cCCcceecchHHHHH-HhcCCCCEEEECCC
Confidence 3599999999752 33332 357655554 46678999998543
No 319
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=40.64 E-value=1.2e+02 Score=23.19 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=31.6
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcce
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGAD 292 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd 292 (396)
..+|+++|..|.. ...+...|.+.|..|....+..-+.- + .+.|.||+..+
T Consensus 6 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~ 59 (132)
T 3lte_A 6 SKRILVVDDDQAM-AAAIERVLKRDHWQVEIAHNGFDAGIKLSTFEPAIMTLDLS 59 (132)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHTCCSEEEEESC
T ss_pred CccEEEEECCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcCCCEEEEecC
Confidence 4577777776543 34456667778887776665433322 2 46788888654
No 320
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=40.59 E-value=84 Score=29.90 Aligned_cols=105 Identities=11% Similarity=0.022 Sum_probs=54.3
Q ss_pred ccCceEEeecChHHHH--HHHHHHHH--CCC-------eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-------h
Q 016064 214 FDGCTILVHGFSRVVM--EVLKMAAQ--NKK-------LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-------S 275 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~--~~L~~A~~--~gk-------~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-------s 275 (396)
....+++|-|.+..+. .++..... .|. .-+|++.+ |.+.+... .+...|.++..++- .
T Consensus 86 ~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~g~d~~ 161 (423)
T 3ez1_A 86 KAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTV--PGYDRHFL--LLQTLGFELLTVDMQSDGPDVD 161 (423)
T ss_dssp CGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEE--SCCHHHHH--HHHHHTCEEEEEEEETTEECHH
T ss_pred ChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcC--CCcHHHHH--HHHHcCCEEEeccCCCCCCCHH
Confidence 3456888888777765 44444333 231 24666543 66655543 34445777666541 3
Q ss_pred HHHHhc---ccCCEEEEcceeEeecCCeeccccHHHHHHHh-hhCCCcEEE
Q 016064 276 AVAYTM---DEVDMVFVGADGVVESGGIINMMGTYQIALVA-HSMNKPVYV 322 (396)
Q Consensus 276 av~~~m---~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~A-k~~~vPvyV 322 (396)
.+-..+ +++..|++-...=-+.|.++..--=..++-+| +++++.+++
T Consensus 162 ~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 162 AVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp HHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred HHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 344444 23333432211112234444443334666677 888887765
No 321
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=40.36 E-value=1.4e+02 Score=29.43 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=55.2
Q ss_pred cCceEEeecChHHHHHHHHHHHH--------CC----CeeEEEEeCCCCCchhHHHHHHHHhCCC-CEEEEcc-------
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQ--------NK----KLFRVLCTEGRPDRSGLRLANELAKLDV-PVKLLID------- 274 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~--------~g----k~f~ViV~EsrP~~eG~~la~~L~~~GI-~vtlI~D------- 274 (396)
.+..++|-|.|..+...|..+.. .| .+..|++.+. ..-...-+..+...|. ++..++-
T Consensus 151 ~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~--~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d 228 (504)
T 2okj_A 151 DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQ--SHYSIKKAGAALGFGTDNVILIKCNERGKII 228 (504)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETT--SCTHHHHHHHHTTSCGGGEEEECBCTTSCBC
T ss_pred CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCc--chHHHHHHHHHcCCCcccEEEEecCCCCCCC
Confidence 45678888888777777766642 35 2456777642 2222222223333344 7777763
Q ss_pred -hHHHHhccc------CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 275 -SAVAYTMDE------VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 275 -sav~~~m~~------vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.++-..+.+ ..++|+....-...|.+ .. -..++-+|++++++++|
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i-~~--l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-DP--IQEIADICEKYNLWLHV 280 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB-CC--HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc-CC--HHHHHHHHHHcCCEEEE
Confidence 233333332 23444433222223433 22 24678889999999987
No 322
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=40.25 E-value=63 Score=30.57 Aligned_cols=109 Identities=12% Similarity=0.030 Sum_probs=56.3
Q ss_pred CceEEeecChHHHHHHH-HHHH-HCCCeeEEEEeCCCCCch--------hHHHHHHHHhC-C----CC---EEEE-cc--
Q 016064 216 GCTILVHGFSRVVMEVL-KMAA-QNKKLFRVLCTEGRPDRS--------GLRLANELAKL-D----VP---VKLL-ID-- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~-~~gk~f~ViV~EsrP~~e--------G~~la~~L~~~-G----I~---vtlI-~D-- 274 (396)
+.+||..|-++-+-..| +.+. ++| .+|+++...+... -..+...+.+. + -. +.++ .|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN--HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC--CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC--CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 35788888877665444 3344 445 5677665433321 22333323322 1 02 3333 23
Q ss_pred --hHHHHhcc--c-CCEEEEcceeEeecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 275 --SAVAYTMD--E-VDMVFVGADGVVESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 275 --sav~~~m~--~-vd~VlvGAd~V~~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.++..++. . +|.||--|-...... --+|-.||..+.-+|+..++.-+|.+.+
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 34445554 3 676665543211000 0135679999999999888865555444
No 323
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=40.10 E-value=43 Score=31.59 Aligned_cols=91 Identities=13% Similarity=0.153 Sum_probs=56.1
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc--chH-HHHh-cccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI--DSA-VAYT-MDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~--Dsa-v~~~-m~~vd~VlvGA 291 (396)
...|+..|+++.-..+.+.+.+.| . |+++|..|.. ++ +.+.|+++..-. |.. +... +.++|.|++..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~-----~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVR-----KK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGH-----HH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhh-----hh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 457888898887766666665544 3 7778876642 23 666787765432 221 1222 46777777654
Q ss_pred eeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
+ +..-+..+++.||+.+.+..+++
T Consensus 186 ~---------~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 186 E---------SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp S---------SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred C---------ccHHHHHHHHHHHHHCCCCeEEE
Confidence 2 34566788899999887544433
No 324
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=39.94 E-value=1.2e+02 Score=26.95 Aligned_cols=106 Identities=13% Similarity=0.080 Sum_probs=58.5
Q ss_pred cCceEEeecChHHHHHH-HHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-cc----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEV-LKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-ID----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~-L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-.. .+...++| .+|+++... ......+..+|.+.|..+.++ .| ..+..++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G--~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFG--AVIHTCARN-EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESC-HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCC-HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45677777877765443 34444555 467766433 233455677787777776654 23 2233333
Q ss_pred -ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHh----hhCCCcEEEec
Q 016064 282 -DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVA----HSMNKPVYVAA 324 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~A----k~~~vPvyV~a 324 (396)
+++|.||--|- +...+.+ +|-.|+..+.-++ +..+..-+|..
T Consensus 90 ~~~id~li~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~i 149 (266)
T 1xq1_A 90 GGKLDILINNLG-AIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFM 149 (266)
T ss_dssp TTCCSEEEEECC-C------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCcEEEECCC-CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 57888877653 2222221 4667888887766 34455555443
No 325
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=39.87 E-value=82 Score=27.35 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=43.4
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeecc-------ccHHHHHHHhhh
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINM-------MGTYQIALVAHS 315 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nk-------iGT~~lAl~Ak~ 315 (396)
+|.|++. +...-..+.+.|.+.|++++++.+.. -+.++|.++++- |+-... .+...+..-+.+
T Consensus 4 ~I~iid~-~~~~~~~~~~~l~~~G~~~~~~~~~~---~l~~~d~lil~G------~g~~~~~~~~l~~~~~~~~i~~~~~ 73 (200)
T 1ka9_H 4 KALLIDY-GSGNLRSAAKALEAAGFSVAVAQDPK---AHEEADLLVLPG------QGHFGQVMRAFQESGFVERVRRHLE 73 (200)
T ss_dssp EEEEECS-SCSCHHHHHHHHHHTTCEEEEESSTT---SCSSCSEEEECC------CSCHHHHHHTTSSSCTHHHHHHHHH
T ss_pred EEEEEeC-CCccHHHHHHHHHHCCCeEEEecChH---HcccCCEEEECC------CCcHHHHHHHHHhcCHHHHHHHHHH
Confidence 5566653 21112346888999999998887642 355677776632 122111 223333333446
Q ss_pred CCCcEEEeccccc
Q 016064 316 MNKPVYVAAESYK 328 (396)
Q Consensus 316 ~~vPvyV~aes~K 328 (396)
.++|++-+|--+-
T Consensus 74 ~~~PilGIC~G~Q 86 (200)
T 1ka9_H 74 RGLPFLGICVGMQ 86 (200)
T ss_dssp TTCCEEECTHHHH
T ss_pred cCCeEEEEcHHHH
Confidence 7999998875443
No 326
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=39.81 E-value=65 Score=25.81 Aligned_cols=44 Identities=23% Similarity=0.360 Sum_probs=30.5
Q ss_pred HHHHHHHHHHCCCeeEEEEeC-CCCCc--hhHHHHHHHHhCCCCEEEEc
Q 016064 228 VMEVLKMAAQNKKLFRVLCTE-GRPDR--SGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 228 V~~~L~~A~~~gk~f~ViV~E-srP~~--eG~~la~~L~~~GI~vtlI~ 273 (396)
+..++..+ ++|++.- ++.| +-|.. -|..+++.+.+.||+|..|+
T Consensus 69 ~~~i~~~~-~~G~~V~-~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 69 VRQVIELL-EEGSDVA-LVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHHHHH-HTTCCEE-EEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHH-HCCCeEE-EEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 44444444 5577644 4455 88864 46788999999999999886
No 327
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=39.56 E-value=58 Score=33.97 Aligned_cols=62 Identities=18% Similarity=0.050 Sum_probs=45.5
Q ss_pred hccccCceEEeecChHHHHHHHHHHHHC-------C-C---------------------------eeEEEEeCCCCCchh
Q 016064 211 DFIFDGCTILVHGFSRVVMEVLKMAAQN-------K-K---------------------------LFRVLCTEGRPDRSG 255 (396)
Q Consensus 211 ~~I~dg~~ILT~~~S~~V~~~L~~A~~~-------g-k---------------------------~f~ViV~EsrP~~eG 255 (396)
.+.++|-++.|++..+.|.+.|..|-=. + | .+.|+|+-+ +.-|
T Consensus 207 ~~~~~g~~~~t~~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGg--GiaG 284 (676)
T 3ps9_A 207 RLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGG--GIAS 284 (676)
T ss_dssp HHEEEEEEEEESCCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEECCSCCCCCCSCGGGCCCCCSCCEEEEECC--SHHH
T ss_pred HHhCCCCEEEeccCcHHHHHHHHhCCeEEEeccccccchhhhheeccccccccccCCcccCccCCCCCEEEECC--CHHH
Confidence 4678899999999999999999876210 0 1 134444443 2447
Q ss_pred HHHHHHHHhCCCCEEEEcc
Q 016064 256 LRLANELAKLDVPVKLLID 274 (396)
Q Consensus 256 ~~la~~L~~~GI~vtlI~D 274 (396)
...|..|++.|.+|+++--
T Consensus 285 lsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 285 ALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp HHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHCCCeEEEEeC
Confidence 8889999999999999863
No 328
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=39.50 E-value=2.2e+02 Score=26.68 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=53.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHHHH-HHhCCCCEEEEcc---hHHHHhc-ccCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLANE-LAKLDVPVKLLID---SAVAYTM-DEVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la~~-L~~~GI~vtlI~D---sav~~~m-~~vd~VlvG 290 (396)
+.|++-+.+..+..+++.+.+.| -+|++.+ |.+.|. ...+. +...|+++..++. ..+-..+ +++..|++-
T Consensus 69 ~~i~~~sGt~a~~~~~~~~~~~g--~~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 144 (386)
T 1cs1_A 69 GAVLTNTGMSAIHLVTTVFLKPG--DLLVAPH--DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVE 144 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEET--TCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCC--CEEEEec--CCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEe
Confidence 45554333555555554443323 3566654 556553 22333 3567998888763 2333333 456666653
Q ss_pred ceeEeec-CCeeccccHHHHHHHhhhCCCcEEE
Q 016064 291 ADGVVES-GGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 291 Ad~V~~N-G~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.+... |.+. . -..++-+|+++++.+++
T Consensus 145 --~~~nptG~~~-~--l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 145 --SPSNPLLRVV-D--IAKICHLAREVGAVSVV 172 (386)
T ss_dssp --CSCTTTCCCC-C--HHHHHHHHHHTTCEEEE
T ss_pred --CCCCCCCccc-C--HHHHHHHHHHcCCEEEE
Confidence 23332 4443 2 35678889999998876
No 329
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=39.47 E-value=78 Score=27.79 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=54.4
Q ss_pred CceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGA 291 (396)
..+||..|-|+-+-..|.+. .++| .++|+++..+|... ..+...++.+... .| ..+..++..+|.||..|
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAKI-----HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGGS-----CSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhhh-----cccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 35788888887766555444 3334 26777665443210 1112223322211 22 45666778888777533
Q ss_pred eeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|..-...++-.++-+++..+++-+|...+
T Consensus 97 ------~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 97 ------TGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp ------CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ------CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 22222346677777888888876665555
No 330
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=39.41 E-value=89 Score=29.88 Aligned_cols=75 Identities=13% Similarity=0.159 Sum_probs=46.8
Q ss_pred CCCeeEEEEeCCCCCchhHHHHHHHHhCCCCE---------EEEcc--hHHHHhcccCCEEEEcceeEeecCCeeccccH
Q 016064 238 NKKLFRVLCTEGRPDRSGLRLANELAKLDVPV---------KLLID--SAVAYTMDEVDMVFVGADGVVESGGIINMMGT 306 (396)
Q Consensus 238 ~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~v---------tlI~D--sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT 306 (396)
+...++++++-..|.. ..++.+.+.+.|+.. .++.| .-+..++..+|.++++... .+.|+.
T Consensus 222 ~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~-~e~gg~------ 293 (374)
T 2xci_A 222 TYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTF-VNIGGH------ 293 (374)
T ss_dssp TCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSS-SSSCCC------
T ss_pred hCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcc-cCCCCc------
Confidence 3456777766444432 235666667788863 34444 5688899999998887532 122321
Q ss_pred HHHHHHhhhCCCcEEE
Q 016064 307 YQIALVAHSMNKPVYV 322 (396)
Q Consensus 307 ~~lAl~Ak~~~vPvyV 322 (396)
..+=|-..|+||++
T Consensus 294 --~~lEAmA~G~PVI~ 307 (374)
T 2xci_A 294 --NLLEPTCWGIPVIY 307 (374)
T ss_dssp --CCHHHHTTTCCEEE
T ss_pred --CHHHHHHhCCCEEE
Confidence 24557788999986
No 331
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=39.32 E-value=38 Score=34.52 Aligned_cols=96 Identities=13% Similarity=-0.018 Sum_probs=60.4
Q ss_pred HHHHhhccccCceEEeecChHH---HHHHHHHHHH--CCCeeEEEEe--C-------CC----------CCchhHHHHHH
Q 016064 206 AMLSQDFIFDGCTILVHGFSRV---VMEVLKMAAQ--NKKLFRVLCT--E-------GR----------PDRSGLRLANE 261 (396)
Q Consensus 206 a~~a~~~I~dg~~ILT~~~S~~---V~~~L~~A~~--~gk~f~ViV~--E-------sr----------P~~eG~~la~~ 261 (396)
++.++.+|++|++|.+-|..+. +...|.+-.+ .-+.++++-. . -+ +++.|.. .+.
T Consensus 29 aeEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~~~~~G~~~~~~~~~~~~~~~~~~~~f~~~~-~R~ 107 (455)
T 3qli_A 29 PEEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYYFETAKIAGDTILRYELNNRIKPYSMFVTAV-ERA 107 (455)
T ss_dssp HHHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEESSCCHHHHHTTTCGGGTTTEEEEESSCCHH-HHH
T ss_pred HHHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEEecccccchhhhhChhhcCcEEEeeCcCChh-HHH
Confidence 3456789999999999887664 3333433222 2356777632 1 11 3444533 345
Q ss_pred HHhCC--------CCEEEEcchHHHHhcc---cCCEEEEcceeEeecCCeec
Q 016064 262 LAKLD--------VPVKLLIDSAVAYTMD---EVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 262 L~~~G--------I~vtlI~Dsav~~~m~---~vd~VlvGAd~V~~NG~v~n 302 (396)
+...| +...-+.-|.+..+++ ++|.+++.+...-.+|.+.-
T Consensus 108 ~i~~G~~~~~~~~~~y~p~~ls~~p~~~~~~~~iDVAli~vs~~D~~G~~s~ 159 (455)
T 3qli_A 108 LIRRGIEDGGRKVVNYVPSNFHQAPRLLAEEIGIDTFMHTVSPMDCHGYFSL 159 (455)
T ss_dssp HHHHHHHTTTCCCCCCCCCCGGGHHHHHHTTTCCSEEEEEECCCCTTSEEEC
T ss_pred HHhCCCcccCcCcEEEECccHHHHHHHHHhcCCCCEEEEEEecCCCCceEEE
Confidence 55555 4444455677777773 68999999999988887753
No 332
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=39.18 E-value=56 Score=32.08 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=56.6
Q ss_pred CceEEeecChHHHHHHHHHHHHC-CCeeEEEEeCCCCCchhHHH-HHHHHhC------CC-----CEEEEcch-------
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN-KKLFRVLCTEGRPDRSGLRL-ANELAKL------DV-----PVKLLIDS------- 275 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~-gk~f~ViV~EsrP~~eG~~l-a~~L~~~------GI-----~vtlI~Ds------- 275 (396)
..+++|-|.|..++..|+.|... |+ -+|++.+ |.+.|..+ +..+... +. .+..++..
T Consensus 126 ~~v~~~~sGseA~~~alk~a~~~~g~-~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (453)
T 4ffc_A 126 KRTALFNSGAEAVENAIKVARLATGR-PAVVAFD--NAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEP 202 (453)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHCC-CEEEEET--TCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCT
T ss_pred cEEEEeCcHHHHHHHHHHHHHHhcCC-CEEEEEc--CccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCcc
Confidence 35788888888888888777642 43 3555544 34445444 3333211 11 34443321
Q ss_pred -------------HHHHhcccCCEEEEcceeEeecCCeec-cccHH-HHHHHhhhCCCcEEE
Q 016064 276 -------------AVAYTMDEVDMVFVGADGVVESGGIIN-MMGTY-QIALVAHSMNKPVYV 322 (396)
Q Consensus 276 -------------av~~~m~~vd~VlvGAd~V~~NG~v~n-kiGT~-~lAl~Ak~~~vPvyV 322 (396)
.+-..+..-+..++=.+-+..+|+++- .-+-. .++-+|++|++.+++
T Consensus 203 g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 203 GLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp TCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 122222222334444466787777664 34433 377889999998876
No 333
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=39.17 E-value=2.6e+02 Score=26.73 Aligned_cols=102 Identities=14% Similarity=0.113 Sum_probs=54.0
Q ss_pred CceEEeecChHHHHHHHHHHHH-------CCCeeEEEEeCCCCCchhHHH-HHHHH-----hCCC-----CEEEEc--c-
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ-------NKKLFRVLCTEGRPDRSGLRL-ANELA-----KLDV-----PVKLLI--D- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~-------~gk~f~ViV~EsrP~~eG~~l-a~~L~-----~~GI-----~vtlI~--D- 274 (396)
..+++|-|.+..+..+++.+.. .|+ -+|++.+ |.+.|... +..+. ..|. .+..++ |
T Consensus 115 ~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~-~~vi~~~--~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~ 191 (420)
T 2pb2_A 115 ERVLFMNSGTEANETAFKLARHYACVRHSPFK-TKIIAFH--NAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDL 191 (420)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET--TCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC-CEEEEEe--CCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCH
Confidence 4677777777777777776653 343 3666665 44434322 22221 1121 255554 3
Q ss_pred hHHHHhcc-cCCEEEEcceeEeecCCe--eccccHHHHHHHhhhCCCcEEE
Q 016064 275 SAVAYTMD-EVDMVFVGADGVVESGGI--INMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 275 sav~~~m~-~vd~VlvGAd~V~~NG~v--~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.++-..+. ++..|++ +.+...|++ ..+-=-..++-+|+++++++++
T Consensus 192 ~~le~~i~~~~~~vi~--~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 192 HAVKAVMDDHTCAVVV--EPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp HHHHHHCCTTEEEEEE--CSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhccCceEEEE--eCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 33444443 3334433 445555554 2222234577789999998876
No 334
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=39.03 E-value=1.4e+02 Score=29.01 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=57.3
Q ss_pred ceEEeecChHHHHHHHHHHHH-CCCeeEEEEeCCCCCchhHHH-HHHHHhC------C-----CCEEEEcch--------
Q 016064 217 CTILVHGFSRVVMEVLKMAAQ-NKKLFRVLCTEGRPDRSGLRL-ANELAKL------D-----VPVKLLIDS-------- 275 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~-~gk~f~ViV~EsrP~~eG~~l-a~~L~~~------G-----I~vtlI~Ds-------- 275 (396)
.+++|.|.|..++..|+.|.. .|+ -+|++.+ |.+.|..+ +..+... + -.+..++..
T Consensus 124 ~v~~~~sGseA~~~Alk~a~~~~g~-~~ii~~~--~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (451)
T 3oks_A 124 RSALFNSGSEAVENAVKIARSHTHK-PAVVAFD--HAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEF 200 (451)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCC-CEEEEET--TCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGG
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCC-CeEEEEc--CCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 578888888888888877765 244 3455543 34445444 3333211 1 134444321
Q ss_pred ----------HHHHh---cc----cCCEEEEcceeEeecCCeeccc-c-HHHHHHHhhhCCCcEEE
Q 016064 276 ----------AVAYT---MD----EVDMVFVGADGVVESGGIINMM-G-TYQIALVAHSMNKPVYV 322 (396)
Q Consensus 276 ----------av~~~---m~----~vd~VlvGAd~V~~NG~v~nki-G-T~~lAl~Ak~~~vPvyV 322 (396)
.+..+ +. .-+..++=.+-+..+|+++..- + =..++-+|++|++.+++
T Consensus 201 g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~ 266 (451)
T 3oks_A 201 GKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIA 266 (451)
T ss_dssp CTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred ccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 12211 11 1233344446688888776543 3 34577789999998876
No 335
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=39.02 E-value=84 Score=28.47 Aligned_cols=69 Identities=14% Similarity=0.226 Sum_probs=37.4
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhc--cc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTM--DE 283 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m--~~ 283 (396)
.||.-|+.+..+.++ .+.++|. ..+|. |.=.+|...+.+.| .+.|||+..+.. ..+...+ -+
T Consensus 6 avl~Sg~Gsnl~ali-~~~~~~~l~~eI~~Visn~~~a~v~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 81 (211)
T 3p9x_A 6 AIFASGSGTNAEAII-QSQKAGQLPCEVALLITDKPGAKVVERV---KVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQ 81 (211)
T ss_dssp EEECCTTCHHHHHHH-HHHHTTCCSSEEEEEEESCSSSHHHHHH---HTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCchHHHHHH-HHHHcCCCCcEEEEEEECCCCcHHHHHH---HHcCCCEEEeChhhcCchhhhHHHHHHHHHhcC
Confidence 455555555555555 4555553 23444 33356665444444 467999987753 2333334 35
Q ss_pred CCEEEEc
Q 016064 284 VDMVFVG 290 (396)
Q Consensus 284 vd~VlvG 290 (396)
+|.+++-
T Consensus 82 ~Dliv~a 88 (211)
T 3p9x_A 82 IDFVVLA 88 (211)
T ss_dssp CCEEEES
T ss_pred CCEEEEe
Confidence 7776653
No 336
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=39.00 E-value=16 Score=36.87 Aligned_cols=96 Identities=16% Similarity=0.097 Sum_probs=58.8
Q ss_pred HHHhhccccCceEEeecChHHHHHHHHHHHHC---CCeeEEEEeC--CC---------------CCchhHHHHHHHHhCC
Q 016064 207 MLSQDFIFDGCTILVHGFSRVVMEVLKMAAQN---KKLFRVLCTE--GR---------------PDRSGLRLANELAKLD 266 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~---gk~f~ViV~E--sr---------------P~~eG~~la~~L~~~G 266 (396)
+.|+++|++|++|...++.+.-..++....++ -+.++++..- .. |++-|-.+++...+-+
T Consensus 10 eeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~~kdLtl~~~~s~g~~~~~~~~l~~~i~~~~~~~~~~lr~~i~~G~ 89 (436)
T 2oas_A 10 LEAVSLIRSGETLWTHSMGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPLLQSGD 89 (436)
T ss_dssp HHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHHHHTTS
T ss_pred HHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhccCCCEEEEEecccCChhhhHHHhcCcEEEeecCCCHHHHHHHHcCC
Confidence 45667899999999988866444444433333 2678887521 11 1222334555555555
Q ss_pred CCEEEEcchHHHHhc----ccCCEEEEcceeEeecCCeec
Q 016064 267 VPVKLLIDSAVAYTM----DEVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 267 I~vtlI~Dsav~~~m----~~vd~VlvGAd~V~~NG~v~n 302 (396)
+..+-+.-+.+..++ -++|..|+.|...-++|.+.-
T Consensus 90 ~~y~P~~ls~~~~~l~~~~l~~DVAlI~as~aD~~Gn~s~ 129 (436)
T 2oas_A 90 ADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGMCSL 129 (436)
T ss_dssp SEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEEC
T ss_pred CeeeCCccccHHHHHHcCCCCCCEEEEEeccCCCCceEEE
Confidence 544444445555444 258999999999888998754
No 337
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=38.83 E-value=95 Score=27.37 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=49.5
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS- 315 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~- 315 (396)
...+|+++|..|.. ...+...|.+.|+.|....+..-+.- + ...|.||+..+ +.+ .-|--.+..+-+.
T Consensus 22 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~--lp~-----~~g~~~~~~lr~~~ 93 (250)
T 3r0j_A 22 PEARVLVVDDEANI-VELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVX--MPG-----MDGFGVLRRLRADG 93 (250)
T ss_dssp SSCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESC--CSS-----SCHHHHHHHHHHTT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEEeCC--CCC-----CCHHHHHHHHHhcC
Confidence 45788888887653 33456777788888886666543332 2 46888888643 332 2244444444333
Q ss_pred CCCcEEEecccc
Q 016064 316 MNKPVYVAAESY 327 (396)
Q Consensus 316 ~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 94 ~~~~ii~lt~~~ 105 (250)
T 3r0j_A 94 IDAPALFLTARD 105 (250)
T ss_dssp CCCCEEEEECST
T ss_pred CCCCEEEEECCC
Confidence 579999988643
No 338
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=38.75 E-value=87 Score=30.22 Aligned_cols=96 Identities=9% Similarity=0.160 Sum_probs=52.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhH-HHHH-HHHhCCCCEEEEcc---hHHHHhcc-cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGL-RLAN-ELAKLDVPVKLLID---SAVAYTMD-EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~-~la~-~L~~~GI~vtlI~D---sav~~~m~-~vd~VlvG 290 (396)
+.|++-+.+..+..++. ..+.| -+|++.+ |.+.|. .... .+...|+++..++. ..+...+. +...|++
T Consensus 84 ~~i~~~sG~~ai~~~~~-l~~~g--d~Vl~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~- 157 (403)
T 3cog_A 84 YCLAFASGLAATVTITH-LLKAG--DQIICMD--DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWI- 157 (403)
T ss_dssp EEEEESCHHHHHHHHHT-TSCTT--CEEEEES--SCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHH-HhCCC--CEEEEeC--CCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEE-
Confidence 45555444555555554 43334 3566654 666653 3233 34677999999873 23444443 3334443
Q ss_pred ceeEe-ecCCeeccccHHHHHHHhhhCC-CcEEE
Q 016064 291 ADGVV-ESGGIINMMGTYQIALVAHSMN-KPVYV 322 (396)
Q Consensus 291 Ad~V~-~NG~v~nkiGT~~lAl~Ak~~~-vPvyV 322 (396)
+.+. ..|.+.. -..++-+|++++ ++++|
T Consensus 158 -~~p~nptG~~~~---l~~i~~la~~~g~~~liv 187 (403)
T 3cog_A 158 -ETPTNPTQKVID---IEGCAHIVHKHGDIILVV 187 (403)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHTSSSCCEEEE
T ss_pred -ECCCCCCCeeeC---HHHHHHHHHHcCCCEEEE
Confidence 2222 2344443 456778889999 77765
No 339
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=38.09 E-value=1.8e+02 Score=30.51 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=66.3
Q ss_pred CceEEeecChHHHHHHHHHHHHCCC-eeEEE----EeCCCCCch------------hHHHHHHHHhC--CCCEEEEcc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKK-LFRVL----CTEGRPDRS------------GLRLANELAKL--DVPVKLLID-- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi----V~EsrP~~e------------G~~la~~L~~~--GI~vtlI~D-- 274 (396)
+..||..|-++.=-.+++.....|. ++.++ |.+|...+| -..+++.|.+. +++++.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I 406 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 406 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence 4688999998876667776676674 45555 223333322 23457777764 577766542
Q ss_pred -----------------hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 275 -----------------SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 275 -----------------sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
..+..+++++|.||.+.|..-. -+.+..+|..+++|++-.+
T Consensus 407 ~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~t---------R~lin~~c~~~~~plI~aa 464 (598)
T 3vh1_A 407 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES---------RWLPSLLSNIENKTVINAA 464 (598)
T ss_dssp CCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGG---------THHHHHHHHHTTCEEEEEE
T ss_pred cccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHH---------HHHHHHHHHhcCCCEEEEE
Confidence 2344567889999998776532 3778888999999998753
No 340
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=37.97 E-value=1.2e+02 Score=23.16 Aligned_cols=78 Identities=19% Similarity=0.194 Sum_probs=44.5
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCC--CEEEEcchH--HHHhc--------ccCCEEEEcceeEeecCCeeccccHHHH
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDV--PVKLLIDSA--VAYTM--------DEVDMVFVGADGVVESGGIINMMGTYQI 309 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI--~vtlI~Dsa--v~~~m--------~~vd~VlvGAd~V~~NG~v~nkiGT~~l 309 (396)
.+|+++|..|.. ...+...|.+.|. .|....+.. +..+- ...|.||+..+- .+ .-|-..+
T Consensus 3 ~~ilivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~--~~-----~~g~~~~ 74 (140)
T 1k68_A 3 KKIFLVEDNKAD-IRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL--PK-----KDGREVL 74 (140)
T ss_dssp CEEEEECCCHHH-HHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC--SS-----SCHHHHH
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC--Cc-----ccHHHHH
Confidence 467777766543 3445667777777 555555432 22332 257888887543 21 2344444
Q ss_pred HHHhhh---CCCcEEEecccc
Q 016064 310 ALVAHS---MNKPVYVAAESY 327 (396)
Q Consensus 310 Al~Ak~---~~vPvyV~aes~ 327 (396)
..+-+. .++|+++++...
T Consensus 75 ~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESCC
T ss_pred HHHHcCcccccccEEEEecCC
Confidence 444443 469999988654
No 341
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=37.89 E-value=29 Score=35.03 Aligned_cols=112 Identities=12% Similarity=-0.001 Sum_probs=57.1
Q ss_pred HHhhccccCceEEeecChHHHHHHHHHHHHC---CCeeEEEEeCC-CC----------------CchhHHHHHHHHhCC-
Q 016064 208 LSQDFIFDGCTILVHGFSRVVMEVLKMAAQN---KKLFRVLCTEG-RP----------------DRSGLRLANELAKLD- 266 (396)
Q Consensus 208 ~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~---gk~f~ViV~Es-rP----------------~~eG~~la~~L~~~G- 266 (396)
.++++|++|++|.+.+..+.-..++....++ -+.++++..=+ .| .+.|..+. ++...|
T Consensus 20 EAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~~l~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~i~~G~ 98 (434)
T 3eh7_A 20 EAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGGNSR-KAVEENR 98 (434)
T ss_dssp HHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC------------------------------C
T ss_pred HHHHhCCCcCEEEECCccCCHHHHHHHHHHhHhhcCCeEEEEeccCCchhhcChhhhCeEEEecCcCCHHHH-HHHHCCC
Confidence 4566899999999998666433333333332 24566662211 11 12222222 223333
Q ss_pred CCEEEEcchHHHHhcc----cCCEEEEcceeEeecCCeeccccH-HHHHHHhhhCCCcEEE
Q 016064 267 VPVKLLIDSAVAYTMD----EVDMVFVGADGVVESGGIINMMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 267 I~vtlI~Dsav~~~m~----~vd~VlvGAd~V~~NG~v~nkiGT-~~lAl~Ak~~~vPvyV 322 (396)
+...-+.-+.+..++. ++|.+++.+...-++|.+.- |+ ...+..+.....-|++
T Consensus 99 ~~~~p~~ls~~~~~~~~g~~~~DVAli~as~~D~~Gn~s~--g~s~~~~~~~~~~A~~VI~ 157 (434)
T 3eh7_A 99 ADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSF--GVSCDYSKPAAESAHLVIG 157 (434)
T ss_dssp TTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEEC--TTBCTTHHHHHHHCSEEEE
T ss_pred ccccChhHHHHHHHHHhCCCCCcEEEEEEecCCCCCCEEe--cCccchHHHHHHhCCeEEE
Confidence 3333344566666663 58999999999999998863 43 2334444444444444
No 342
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=37.78 E-value=62 Score=30.30 Aligned_cols=95 Identities=11% Similarity=-0.010 Sum_probs=51.2
Q ss_pred cccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---------HHHHhccc
Q 016064 213 IFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---------AVAYTMDE 283 (396)
Q Consensus 213 I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---------av~~~m~~ 283 (396)
+.....|+|-|.+..+...|+.+. -++.-+|++.+ |.+.+.. ..+...|.++..+... .+-..+..
T Consensus 48 ~~~~~~~~~~sGt~al~~al~~~~-~~~gd~Vi~~~--~~~~~~~--~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~ 122 (367)
T 3nyt_A 48 VGAKYCISCANGTDALQIVQMALG-VGPGDEVITPG--FTYVATA--ETVALLGAKPVYVDIDPRTYNLDPQLLEAAITP 122 (367)
T ss_dssp HTCSEEEEESCHHHHHHHHHHHTT-CCTTCEEEEES--SSCTHHH--HHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCT
T ss_pred hCCCcEEEeCCHHHHHHHHHHHhC-CCCcCEEEECC--CccHHHH--HHHHHcCCEEEEEecCCccCCcCHHHHHHhcCc
Confidence 333457777666666666665541 12233566554 4444433 3355679888877522 12222222
Q ss_pred CCEEEEcceeEeecCCeeccccH----HHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGT----YQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT----~~lAl~Ak~~~vPvyV 322 (396)
=.++++ +.|..|+ ..++-+|+++++++++
T Consensus 123 ~~~~v~----------~~~~~G~~~~~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 123 RTKAII----------PVSLYGQCADFDAINAIASKYGIPVIE 155 (367)
T ss_dssp TEEEEC----------CBCGGGCCCCHHHHHHHHHHTTCCBEE
T ss_pred CCcEEE----------eeCCccChhhHHHHHHHHHHcCCEEEE
Confidence 123333 2234443 4578889999999987
No 343
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=37.77 E-value=1.7e+02 Score=27.37 Aligned_cols=105 Identities=13% Similarity=0.062 Sum_probs=56.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHC--------CCeeEEEEeCCCCCchhHHH-HHHHHhC----------CCCEEEEc--
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQN--------KKLFRVLCTEGRPDRSGLRL-ANELAKL----------DVPVKLLI-- 273 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~--------gk~f~ViV~EsrP~~eG~~l-a~~L~~~----------GI~vtlI~-- 273 (396)
...+++|-|.+..+...++.+... ...-+|++.+ |.+.|... +..+... ..++..++
T Consensus 93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (392)
T 3ruy_A 93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCE--DNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG 170 (392)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEc--CCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc
Confidence 346777777777777777655432 1223565543 23333333 2222221 11244443
Q ss_pred c-hHHHHhc-ccCCEEEEcceeEeecCCeecccc-HHHHHHHhhhCCCcEEE
Q 016064 274 D-SAVAYTM-DEVDMVFVGADGVVESGGIINMMG-TYQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 D-sav~~~m-~~vd~VlvGAd~V~~NG~v~nkiG-T~~lAl~Ak~~~vPvyV 322 (396)
| ..+-..+ +++.+|++-. .--..|.+...-. -..++-+|+++++++++
T Consensus 171 d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 171 DLEALKAAITPNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp CHHHHHHHCCTTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred cHHHHHHHhccCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 3344444 3455555533 2222355665666 67788899999998886
No 344
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=37.75 E-value=96 Score=28.43 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=57.3
Q ss_pred eEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCC-CCEEEEcc----hHHHHhccc--CCEEEE
Q 016064 218 TILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLD-VPVKLLID----SAVAYTMDE--VDMVFV 289 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~G-I~vtlI~D----sav~~~m~~--vd~Vlv 289 (396)
+||..|-++-+-.-| +.+.++| .+|+++...........+..|...| +.+. ..| .++..++.. +|.||-
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~d~vih 79 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFV-HGDIRNKNDVTRLITKYMPDSCFH 79 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCCSTTHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCCCccCchhhhhhhccCCceEEE-EcCCCCHHHHHHHHhccCCCEEEE
Confidence 577778777665544 3344445 5677665322111223345565544 3322 223 345556666 888776
Q ss_pred cceeEeecC--------CeeccccHHHHHHHhhhCCCc-EEEecc
Q 016064 290 GADGVVESG--------GIINMMGTYQIALVAHSMNKP-VYVAAE 325 (396)
Q Consensus 290 GAd~V~~NG--------~v~nkiGT~~lAl~Ak~~~vP-vyV~ae 325 (396)
-|-....+. --+|-.||..++-+|+.++++ -+|...
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S 124 (347)
T 1orr_A 80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 553211100 014667999999999988875 444433
No 345
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=37.75 E-value=82 Score=27.51 Aligned_cols=80 Identities=11% Similarity=0.156 Sum_probs=49.2
Q ss_pred eEEeecChHHHHHHHHHHHHC-CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-----------hHHHHhc----
Q 016064 218 TILVHGFSRVVMEVLKMAAQN-KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-----------SAVAYTM---- 281 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~-gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-----------sav~~~m---- 281 (396)
+|-||.....+.+.|....++ ...++|+|++.....+-...++++.+ .-+++++.- ...+..+
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi 84 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQAI 84 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHHHH
Confidence 455676777788888877665 35789888876655545555666654 556666643 2333322
Q ss_pred --ccCC-EEEEcceeEeecC
Q 016064 282 --DEVD-MVFVGADGVVESG 298 (396)
Q Consensus 282 --~~vd-~VlvGAd~V~~NG 298 (396)
.+.+ .+++.+|.++..+
T Consensus 85 ~~a~g~~i~~lD~Dd~~~~~ 104 (255)
T 1qg8_A 85 EMAEGEYITYATDDNIYMPD 104 (255)
T ss_dssp HHCCCSEEEEEETTEEECTT
T ss_pred HHcCCCEEEEeCCCCccChH
Confidence 3445 4466788777654
No 346
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=37.65 E-value=2.2e+02 Score=28.09 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=60.1
Q ss_pred cCceEEeecChH-----HHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCC---EEEEc---chHHHHhccc
Q 016064 215 DGCTILVHGFSR-----VVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVP---VKLLI---DSAVAYTMDE 283 (396)
Q Consensus 215 dg~~ILT~~~S~-----~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~---vtlI~---Dsav~~~m~~ 283 (396)
++..|+..|+-. .+.+.+....++...++++++-. .+..-..+-+...+.|+. |.+.. +..+..+|..
T Consensus 375 ~~~~v~~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~-~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~ 453 (568)
T 2vsy_A 375 EQGVVLCCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSG-PGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRH 453 (568)
T ss_dssp TTSCEEEECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECC-STTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCcEEEEecC-CHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhc
Confidence 445666666533 34444444444456677776652 122224555666778886 66643 3468888999
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
+|.+++-... |.-...+=|-..|+||+++..
T Consensus 454 adv~v~ps~~-----------~~g~~~lEAma~G~Pvv~~~g 484 (568)
T 2vsy_A 454 ADLFLDTHPY-----------NAHTTASDALWTGCPVLTTPG 484 (568)
T ss_dssp CSEEECCSSS-----------CCSHHHHHHHHTTCCEEBCCC
T ss_pred CCEEeeCCCC-----------CCcHHHHHHHhCCCCEEeccC
Confidence 9998876432 222355677889999998543
No 347
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=37.65 E-value=1e+02 Score=28.83 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=46.8
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhC--CCCEEEEcchHHHHhcccCCEEEE
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKL--DVPVKLLIDSAVAYTMDEVDMVFV 289 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~--GI~vtlI~Dsav~~~m~~vd~Vlv 289 (396)
.|.++|..|.++.-..+...+.+.|-. +|+|. +|-......+++++... ++++.......+...+.++|.||=
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~-~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQ-KLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVN 200 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCS-EEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCC-EEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEE
Confidence 467888889888777777666665632 44544 44444466777777755 456666654456666777887663
No 348
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=37.65 E-value=1.4e+02 Score=27.10 Aligned_cols=99 Identities=12% Similarity=-0.011 Sum_probs=53.7
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHH----Hhc--ccCCEEEE
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVA----YTM--DEVDMVFV 289 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~----~~m--~~vd~Vlv 289 (396)
..+++|.|.+..+..++..+.+.| -+|++.+ |...|..+...+...|.++..++-..-+ ..+ ++...|++
T Consensus 52 ~~i~~~~g~t~a~~~~~~~~~~~g--d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~ 127 (352)
T 1iug_A 52 EVLILTGSGTLAMEALVKNLFAPG--ERVLVPV--YGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLL 127 (352)
T ss_dssp EEEEEESCHHHHHHHHHHHHCCTT--CEEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEE
T ss_pred ceEEEcCchHHHHHHHHHhccCCC--CeEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEE
Confidence 356666666666666665554334 3566553 4455544444456689888877531100 011 23444444
Q ss_pred cceeEeecCCeeccccHHHHHHHhhhC--CCcEEE
Q 016064 290 GADGVVESGGIINMMGTYQIALVAHSM--NKPVYV 322 (396)
Q Consensus 290 GAd~V~~NG~v~nkiGT~~lAl~Ak~~--~vPvyV 322 (396)
. ..-...|.+.. --.++-+|+++ ++.+++
T Consensus 128 ~-~~~nptG~~~~---l~~i~~l~~~~~~~~~li~ 158 (352)
T 1iug_A 128 V-HSETSTGALAD---LPALARAFKEKNPEGLVGA 158 (352)
T ss_dssp E-SEETTTTEECC---HHHHHHHHHHHCTTCEEEE
T ss_pred E-EecCCcceecC---HHHHHHHHHhhCCCCEEEE
Confidence 2 22223355443 24677888888 887776
No 349
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=37.48 E-value=98 Score=24.02 Aligned_cols=80 Identities=13% Similarity=0.147 Sum_probs=47.8
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCC--CEEEEcchH--HHHhc-----------ccCCEEEEcceeEeecCCeeccc
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDV--PVKLLIDSA--VAYTM-----------DEVDMVFVGADGVVESGGIINMM 304 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI--~vtlI~Dsa--v~~~m-----------~~vd~VlvGAd~V~~NG~v~nki 304 (396)
...+|+++|..|.. ...+...|.+.|. .|....+.. +..+- ...|.||+..+- . ..-
T Consensus 5 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l--~-----~~~ 76 (149)
T 1k66_A 5 ATQPLLVVEDSDED-FSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL--P-----GTD 76 (149)
T ss_dssp TTSCEEEECCCHHH-HHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC--S-----SSC
T ss_pred CCccEEEEECCHHH-HHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC--C-----CCC
Confidence 45678888876643 3455777888887 677666543 33332 357888887543 2 123
Q ss_pred cHHHHHHHhhh---CCCcEEEecccc
Q 016064 305 GTYQIALVAHS---MNKPVYVAAESY 327 (396)
Q Consensus 305 GT~~lAl~Ak~---~~vPvyV~aes~ 327 (396)
|--.+..+-+. .++|+++++...
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~t~~~ 102 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIMTTSS 102 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEEESCC
T ss_pred HHHHHHHHHhCcccCCCeEEEEeCCC
Confidence 44344444443 468999987653
No 350
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=37.38 E-value=1.2e+02 Score=23.41 Aligned_cols=80 Identities=15% Similarity=0.205 Sum_probs=46.0
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc---ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM---DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m---~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
....+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|.-.+..+.+
T Consensus 13 ~~~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dlvilD~~l--~~-----~~g~~~~~~l~~ 84 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSH-ATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQL--VD-----LSIFSLLDIVKE 84 (138)
T ss_dssp -CCCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTC--TT-----SCHHHHHHHHTT
T ss_pred CCCCeEEEECCCHHH-HHHHHHHHHHcCCEEEEeCCHHHHHHHHHhCCCCCEEEEeCCC--CC-----CCHHHHHHHHHh
Confidence 345678888876643 3455667777888877666543332 22 347888886532 21 224333333333
Q ss_pred -hCCCcEEEec-cc
Q 016064 315 -SMNKPVYVAA-ES 326 (396)
Q Consensus 315 -~~~vPvyV~a-es 326 (396)
..++|+++++ ..
T Consensus 85 ~~~~~~ii~ls~~~ 98 (138)
T 2b4a_A 85 QTKQPSVLILTTGR 98 (138)
T ss_dssp SSSCCEEEEEESCC
T ss_pred hCCCCCEEEEECCC
Confidence 2479999987 54
No 351
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=37.35 E-value=22 Score=29.16 Aligned_cols=53 Identities=13% Similarity=0.224 Sum_probs=36.8
Q ss_pred CceEE-eecChHHHHHHHHHHHHCCCeeEEEEeC-CCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 216 GCTIL-VHGFSRVVMEVLKMAAQNKKLFRVLCTE-GRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 216 g~~IL-T~~~S~~V~~~L~~A~~~gk~f~ViV~E-srP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
|-.|. +.++.......+ .+ ..|.++++| .-|...|..+++.|++.++|+.+++
T Consensus 32 G~~v~~~a~~g~eAl~~~---~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 32 GHEVAATASRMQEALDIA---RK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCCCCBCSCCHHHHHHHH---HH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCEEEEEECCHHHHHHHH---Hh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 54443 445554444443 22 357888777 5699999999999999999976665
No 352
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=37.29 E-value=1.2e+02 Score=30.94 Aligned_cols=109 Identities=19% Similarity=0.251 Sum_probs=63.9
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCC-CCch-hHHHHHHHHhCCCCEEEEc-c----hHHHHhcc------
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGR-PDRS-GLRLANELAKLDVPVKLLI-D----SAVAYTMD------ 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~Esr-P~~e-G~~la~~L~~~GI~vtlI~-D----sav~~~m~------ 282 (396)
.++|..|.++-+-..+ +...++|-. +|+++-.+ +..+ -.++..+|.+.|.+++++. | .++..++.
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 6777777776654433 344454532 44443322 2222 3567889999999888763 2 34555554
Q ss_pred cCCEEEEcceeEeecCCe-------------eccccHHHHHHHhhhCCCcEEEeccc
Q 016064 283 EVDMVFVGADGVVESGGI-------------INMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.+|.||-.|-....+|.+ .|-.|+..+.-+++..+..++|+..|
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS 375 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSS 375 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 355555544222133322 24568888888888888888887655
No 353
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=37.04 E-value=72 Score=32.60 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=66.0
Q ss_pred ccccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEe-CCCC------------CchhHHHHHHHHhCCCCEEEEc----
Q 016064 212 FIFDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCT-EGRP------------DRSGLRLANELAKLDVPVKLLI---- 273 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~-EsrP------------~~eG~~la~~L~~~GI~vtlI~---- 273 (396)
.++.|.++|..|.++-+-..+ +...++|.+ +|+++ .-++ .....++..+|.+.|.+++++.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT 325 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence 345677888888777654433 333444543 23333 3222 1234577888998998888763
Q ss_pred c-hHHHHhccc------CCEEEEcceeEeecCCe-------------eccccHHHHHHHhhhCC-----CcEEEeccc
Q 016064 274 D-SAVAYTMDE------VDMVFVGADGVVESGGI-------------INMMGTYQIALVAHSMN-----KPVYVAAES 326 (396)
Q Consensus 274 D-sav~~~m~~------vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~~-----vPvyV~aes 326 (396)
| .++..++.+ +|.||-.| ++..+|.+ .|-.|+..+.-++..+. ..++|+..|
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~A-Gv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS 402 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLP-PTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS 402 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECC-CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECC-cCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence 3 345555544 56666554 34444433 25578888888777665 667776554
No 354
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=36.97 E-value=1e+02 Score=25.92 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=44.0
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMN 317 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~ 317 (396)
.+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+ +++ .-|--.+..+-+ ..+
T Consensus 5 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~-----~~g~~~~~~l~~~~~~ 76 (208)
T 1yio_A 5 PTVFVVDDDMSV-REGLRNLLRSAGFEVETFDCASTFLEHRRPEQHGCLVLDMR--MPG-----MSGIELQEQLTAISDG 76 (208)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHCCTTSCEEEEEESC--CSS-----SCHHHHHHHHHHTTCC
T ss_pred CEEEEEcCCHHH-HHHHHHHHHhCCceEEEcCCHHHHHHhhhccCCCEEEEeCC--CCC-----CCHHHHHHHHHhcCCC
Confidence 467777776643 3344566777788777655543332 22 34677777543 232 224333333333 357
Q ss_pred CcEEEecccc
Q 016064 318 KPVYVAAESY 327 (396)
Q Consensus 318 vPvyV~aes~ 327 (396)
+|+++++...
T Consensus 77 ~~ii~ls~~~ 86 (208)
T 1yio_A 77 IPIVFITAHG 86 (208)
T ss_dssp CCEEEEESCT
T ss_pred CCEEEEeCCC
Confidence 9999988653
No 355
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=36.83 E-value=73 Score=24.85 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=46.9
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-C
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS-M 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~-~ 316 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+.- + ...|.||+..+ +.+| ..-|.-.+..+-+. .
T Consensus 6 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~~---~~~g~~~~~~l~~~~~ 79 (136)
T 3kto_A 6 HPIIYLVDHQKDA-RAALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAH--LEDK---KDSGIELLETLVKRGF 79 (136)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETT--GGGB---TTHHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCc--CCCC---CccHHHHHHHHHhCCC
Confidence 4578888876653 34556777788888886665443332 2 34677777543 2221 02344444433333 4
Q ss_pred CCcEEEeccccc
Q 016064 317 NKPVYVAAESYK 328 (396)
Q Consensus 317 ~vPvyV~aes~K 328 (396)
++|+++++....
T Consensus 80 ~~~ii~~s~~~~ 91 (136)
T 3kto_A 80 HLPTIVMASSSD 91 (136)
T ss_dssp CCCEEEEESSCC
T ss_pred CCCEEEEEcCCC
Confidence 799999886543
No 356
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=36.66 E-value=1.6e+02 Score=26.81 Aligned_cols=95 Identities=7% Similarity=0.085 Sum_probs=48.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch--------HHHHhcccCCEEE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS--------AVAYTMDEVDMVF 288 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds--------av~~~m~~vd~Vl 288 (396)
.+++|.|.+..+..++ .+.. +. +++++....+ |..+...+...|+++..++.. .+- .-++...|+
T Consensus 63 ~v~~~~g~t~al~~~~-~~l~-~~--~~i~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~-~~~~~~~v~ 135 (362)
T 3ffr_A 63 EVLFLASATEIWERII-QNCV-EK--KSFHCVNGSF--SKRFYEFAGELGREAYKEEAAFGKGFYPADIT-VPADAEIIC 135 (362)
T ss_dssp EEEEESCHHHHHHHHH-HHHC-SS--EEEEEECSHH--HHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC-CCTTCCEEE
T ss_pred EEEEeCCchHHHHHHH-Hhcc-CC--cEEEEcCcHH--HHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh-ccCCccEEE
Confidence 3555544444444344 4443 22 6666554322 344455566779988887632 111 113444554
Q ss_pred EcceeEeecCCeeccccHHHHHHHhhhC-CCcEEE
Q 016064 289 VGADGVVESGGIINMMGTYQIALVAHSM-NKPVYV 322 (396)
Q Consensus 289 vGAd~V~~NG~v~nkiGT~~lAl~Ak~~-~vPvyV 322 (396)
+- ..=...|.+.. --.++-+|+++ ++++++
T Consensus 136 ~~-~~~nptG~~~~---l~~i~~la~~~p~~~li~ 166 (362)
T 3ffr_A 136 LT-HNETSSGVSMP---VEDINTFRDKNKDALIFV 166 (362)
T ss_dssp EE-SEETTTTEECC---HHHHTTSGGGSTTSEEEE
T ss_pred EE-cCCCCcceeCC---HHHHHHHHHhCCCCEEEE
Confidence 43 22122344443 23467778999 998887
No 357
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=36.53 E-value=70 Score=31.02 Aligned_cols=110 Identities=9% Similarity=0.018 Sum_probs=63.2
Q ss_pred CceEEeecChHHHHHHHHHHH-HCCCeeEEEEeCCCCCchhHHHHHHHHhC----CCCEEEE----cchH-HHHhc--cc
Q 016064 216 GCTILVHGFSRVVMEVLKMAA-QNKKLFRVLCTEGRPDRSGLRLANELAKL----DVPVKLL----IDSA-VAYTM--DE 283 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~-~~gk~f~ViV~EsrP~~eG~~la~~L~~~----GI~vtlI----~Dsa-v~~~m--~~ 283 (396)
|.+||..|-++.+-.-|.+.. +.| ..+|+++...+. .-..+..+|.+. +..+.++ .|.. +..++ .+
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g-~~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRN-PQKLHVVDISEN-NMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTC-CSEEEEECSCHH-HHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCC-CCEEEEEECCcc-hHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 678999998887766555444 334 246776654322 223445555542 2344443 2332 33333 57
Q ss_pred CCEEEEcceeEeec----------CCeeccccHHHHHHHhhhCCCcEEEecccc
Q 016064 284 VDMVFVGADGVVES----------GGIINMMGTYQIALVAHSMNKPVYVAAESY 327 (396)
Q Consensus 284 vd~VlvGAd~V~~N----------G~v~nkiGT~~lAl~Ak~~~vPvyV~aes~ 327 (396)
+|.|+--|-..... .--.|-.||..++-+|+.+++.-+|...+.
T Consensus 113 ~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~ 166 (399)
T 3nzo_A 113 YDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD 166 (399)
T ss_dssp CSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 88877644211100 112467899999999999998766665553
No 358
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=36.38 E-value=1.2e+02 Score=24.05 Aligned_cols=81 Identities=14% Similarity=0.112 Sum_probs=42.9
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCC--CCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLD--VPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVA 313 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~G--I~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~A 313 (396)
++..+|+++|..|.. ...+...|.+.| ..|....+..-+. .+ ...|.||+..+- .+ .-|.-.+..+-
T Consensus 18 ~~m~~iLivdd~~~~-~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~l~ 89 (150)
T 4e7p_A 18 GSHMKVLVAEDQSML-RDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEM--PV-----KTGLEVLEWIR 89 (150)
T ss_dssp --CEEEEEECSCHHH-HHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSC--SS-----SCHHHHHHHHH
T ss_pred CCccEEEEEcCCHHH-HHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCC--CC-----CcHHHHHHHHH
Confidence 456777777765543 234455566665 4444454433222 12 457888887543 21 23444444333
Q ss_pred h-hCCCcEEEecccc
Q 016064 314 H-SMNKPVYVAAESY 327 (396)
Q Consensus 314 k-~~~vPvyV~aes~ 327 (396)
+ ..++|+++++...
T Consensus 90 ~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 90 SEKLETKVVVVTTFK 104 (150)
T ss_dssp HTTCSCEEEEEESCC
T ss_pred HhCCCCeEEEEeCCC
Confidence 3 3579999988654
No 359
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=36.38 E-value=62 Score=29.00 Aligned_cols=22 Identities=0% Similarity=-0.339 Sum_probs=13.1
Q ss_pred cHHHHHHHhhh--CCCcEEEeccc
Q 016064 305 GTYQIALVAHS--MNKPVYVAAES 326 (396)
Q Consensus 305 GT~~lAl~Ak~--~~vPvyV~aes 326 (396)
.+..+.-+|+. .+++-+|.+.+
T Consensus 80 ~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 80 VLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHHHHHhhcCCceEEEEeec
Confidence 35566666666 67766665444
No 360
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=36.34 E-value=1.5e+02 Score=27.94 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=52.8
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc-----------hHHHHhcc-cC
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID-----------SAVAYTMD-EV 284 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D-----------sav~~~m~-~v 284 (396)
.+++|.|.+..+..+++.+.+.| -+|++.+ |.+.|... .+...|.++..++. ..+-..+. ++
T Consensus 88 ~v~~t~g~~~al~~~~~~~~~~g--d~Vl~~~--~~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~ 161 (411)
T 2o0r_A 88 EVLVTVGATEAIAAAVLGLVEPG--SEVLLIE--PFYDSYSP--VVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRT 161 (411)
T ss_dssp SEEEEEHHHHHHHHHHHHHCCTT--CEEEEEE--SCCTTHHH--HHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcCCC--CEEEEeC--CCcHhHHH--HHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCc
Confidence 68888877777776666554334 3566543 44445432 34567877766542 22333332 33
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..|++. ..--..|.+...-=-..++-+|+++++.+++
T Consensus 162 ~~v~l~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 162 RALIIN-SPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 344332 1111223332221124677889999998876
No 361
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=36.32 E-value=1.4e+02 Score=25.89 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=46.6
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-..+ +...++| .+|+++..|.......+.++|.+.|.++.++. | ..+..++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G--~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMG--ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356777778777654433 4444445 57887755554455667778887787776652 2 2333333
Q ss_pred ccCCEEEEcc
Q 016064 282 DEVDMVFVGA 291 (396)
Q Consensus 282 ~~vd~VlvGA 291 (396)
+++|.||--|
T Consensus 82 ~~~d~vi~~A 91 (247)
T 2hq1_A 82 GRIDILVNNA 91 (247)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 3788887766
No 362
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=36.18 E-value=1.1e+02 Score=30.78 Aligned_cols=97 Identities=14% Similarity=0.076 Sum_probs=53.8
Q ss_pred CceEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 216 GCTILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+.+||..|-|+-+-..|.+ +.++| .+|+++..++.... . +..-.+......+.++|.||--|-..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G--~~V~~l~R~~~~~~----------~--v~~d~~~~~~~~l~~~D~Vih~A~~~ 212 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG--HEVIQLVRKEPKPG----------K--RFWDPLNPASDLLDGADVLVHLAGEP 212 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSSCCTT----------C--EECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCCCcc----------c--eeecccchhHHhcCCCCEEEECCCCc
Confidence 6789999988877665544 34445 46776654443210 0 11111112233456778777644322
Q ss_pred eec----CC-----eeccccHHHHHHH-hhhCCCcEEEeccc
Q 016064 295 VES----GG-----IINMMGTYQIALV-AHSMNKPVYVAAES 326 (396)
Q Consensus 295 ~~N----G~-----v~nkiGT~~lAl~-Ak~~~vPvyV~aes 326 (396)
..+ .. -+|-.||..++-+ |+..+++-+|.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS 254 (516)
T 3oh8_A 213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASA 254 (516)
T ss_dssp ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEE
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 111 00 1377889999887 77888877776555
No 363
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=36.09 E-value=62 Score=32.79 Aligned_cols=95 Identities=14% Similarity=-0.035 Sum_probs=57.0
Q ss_pred HHHhhccccCceEEeecChHH---HHHHHHHHHHCCCeeEEEEe--CC-----C----------CCchhHHHHHHHHhCC
Q 016064 207 MLSQDFIFDGCTILVHGFSRV---VMEVLKMAAQNKKLFRVLCT--EG-----R----------PDRSGLRLANELAKLD 266 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S~~---V~~~L~~A~~~gk~f~ViV~--Es-----r----------P~~eG~~la~~L~~~G 266 (396)
+.++++|++|++|-.++..+. +...|.+..++-+.++++-. .+ . +.+-|..+.+ +.+.|
T Consensus 15 eeA~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~l~~v~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~i~~G 93 (448)
T 3gk7_A 15 DEAVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPSTRG-SIAEG 93 (448)
T ss_dssp HHHGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTTTHH-HHHHT
T ss_pred HHHHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHhhcCeEEEEeeccCCccccChHHhCcEEEecCcCCHHHHh-HHhCC
Confidence 445669999999999886653 44444332222356777743 11 1 1222333333 33444
Q ss_pred -CCEEEEcchHHHHhcc----cCCEEEEcceeEeecCCeec
Q 016064 267 -VPVKLLIDSAVAYTMD----EVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 267 -I~vtlI~Dsav~~~m~----~vd~VlvGAd~V~~NG~v~n 302 (396)
+...-+.-+.+..++. ++|.+++.+...-.+|.+.-
T Consensus 94 ~~~~~p~~ls~~p~~~~~g~~~~DVAli~as~~D~~Gn~s~ 134 (448)
T 3gk7_A 94 HGQFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCV 134 (448)
T ss_dssp SSEECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEEC
T ss_pred CeeEECchHHhHHHHHHhCCCCCCEEEEEEecCCCCCcEEe
Confidence 3333344577777764 58999999999999998853
No 364
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=36.05 E-value=87 Score=31.87 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=53.3
Q ss_pred ccCceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcce
Q 016064 214 FDGCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd 292 (396)
..+..|..+|-.++-...+.+. +++| ++|.+.|.++... +...|.+.||++.+-.+.. .+...+|.|+++.
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~~~---~~~~L~~~gi~~~~G~~~~--~~~~~~d~vV~Sp- 88 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIYPP---MSTQLEQAGVTIEEGYLIA--HLQPAPDLVVVGN- 88 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCCTT---HHHHHHHTTCEEEESCCGG--GGCSCCSEEEECT-
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCCcH---HHHHHHHCCCEEECCCCHH--HcCCCCCEEEECC-
Confidence 3456777777666544433332 3334 6888889876542 4578889999887644432 2335688887764
Q ss_pred eEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 293 GVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 293 ~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+|-. +.+.-..|++.|+||+=
T Consensus 89 gi~~---------~~p~l~~a~~~gi~v~~ 109 (524)
T 3hn7_A 89 AMKR---------GMDVIEYMLDTGLRYTS 109 (524)
T ss_dssp TCCT---------TSHHHHHHHHHTCCEEE
T ss_pred CcCC---------CCHHHHHHHHCCCcEEE
Confidence 1211 12333456666777663
No 365
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=36.04 E-value=21 Score=33.76 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=57.9
Q ss_pred CceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHH-hCCCCEEEE--c-c-hHHHHhcccCCEEEE
Q 016064 216 GCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELA-KLDVPVKLL--I-D-SAVAYTMDEVDMVFV 289 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~-~~GI~vtlI--~-D-sav~~~m~~vd~Vlv 289 (396)
+.+||..|-++-+-..|.++ .++ ...+|+++..++... ..+. ..++.+... . | ..+..++.++|.||-
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRL-----GDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTT-----GGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhh-----hhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 46889999888766655443 333 136777776544321 1111 234433321 1 2 345556778888876
Q ss_pred cceeEeecCC--------eeccccHHHHHHHhhhCCCcEEEecc
Q 016064 290 GADGVVESGG--------IINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 290 GAd~V~~NG~--------v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
-|-....... -+|-.||..+.-+|+..+..|+.+..
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS 141 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 141 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECC
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCc
Confidence 4432211110 24668999999999888855555543
No 366
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=36.02 E-value=3.7e+02 Score=27.48 Aligned_cols=108 Identities=13% Similarity=0.061 Sum_probs=68.3
Q ss_pred HHHHHhhccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCC--------------Cchh----HHHHHHHHhCC
Q 016064 205 IAMLSQDFIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRP--------------DRSG----LRLANELAKLD 266 (396)
Q Consensus 205 Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP--------------~~eG----~~la~~L~~~G 266 (396)
++..+.+.+.+ ..||..|-+++=-.+++.....|.. ++.++|... ..-| ..+++.|.+.+
T Consensus 22 ~G~~~q~~L~~-~~VlvvG~GGlGseiak~La~aGVg-~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lN 99 (531)
T 1tt5_A 22 WGDHGQEALES-AHVCLINATATGTEILKNLVLPGIG-SFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELN 99 (531)
T ss_dssp HHHHHHHHHHH-CEEEEECCSHHHHHHHHHHHTTTCS-EEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTC
T ss_pred cCHHHHHHHhc-CeEEEECcCHHHHHHHHHHHHcCCC-eEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhC
Confidence 55666666665 5788889888767777777777743 333334322 1112 34467777764
Q ss_pred --CCEEEEcchHH------HHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 267 --VPVKLLIDSAV------AYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 267 --I~vtlI~Dsav------~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
++++.+...-- ..++++.|.||.+.|..- --+.+.-.|+.+++|++.+
T Consensus 100 p~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 100 SDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPES---------TSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp TTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHH---------HHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEE
Confidence 67776654321 134678999988866432 3456667788999999876
No 367
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=35.93 E-value=1.6e+02 Score=26.33 Aligned_cols=51 Identities=16% Similarity=0.202 Sum_probs=29.3
Q ss_pred EeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 220 LVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 220 LT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
|.-|..+....+|....+.+-..+|. |+-.+|...|.+.| .+.|||+..+.
T Consensus 7 l~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A---~~~gIp~~~~~ 58 (216)
T 2ywr_A 7 LVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERC---KKHNVECKVIQ 58 (216)
T ss_dssp EECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH---HHHTCCEEECC
T ss_pred EEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH---HHcCCCEEEeC
Confidence 33377766666666555433333543 33345666665555 45699998754
No 368
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=35.93 E-value=1.4e+02 Score=23.00 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=42.9
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMN 317 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~ 317 (396)
.+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|.-.+..+.+ ..+
T Consensus 4 ~~Ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~ 75 (132)
T 3crn_A 4 KRILIVDDDTAI-LDSTKQILEFEGYEVEIAATAGEGLAKIENEFFNLALFXIKL--PD-----MEGTELLEKAHKLRPG 75 (132)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEECSBC--SS-----SBHHHHHHHHHHHCTT
T ss_pred cEEEEEeCCHHH-HHHHHHHHHHCCceEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CchHHHHHHHHhhCCC
Confidence 467777766543 3344556667787777555433222 12 357888886542 22 224433444433 357
Q ss_pred CcEEEeccc
Q 016064 318 KPVYVAAES 326 (396)
Q Consensus 318 vPvyV~aes 326 (396)
+|+++++..
T Consensus 76 ~~ii~~s~~ 84 (132)
T 3crn_A 76 MKKIMVTGY 84 (132)
T ss_dssp SEEEEEESC
T ss_pred CcEEEEecc
Confidence 899988754
No 369
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=35.73 E-value=75 Score=28.90 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=47.5
Q ss_pred CceEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcc--cCCEEEEcce
Q 016064 216 GCTILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGAD 292 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~--~vd~VlvGAd 292 (396)
+.+||..|.|+-+-..|.+ +.++| .+|+++.-++...+ -+.+-+....++..++. ++|.||--|-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRARPK----------FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----------------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCCCCC----------eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 4578888888776555444 34434 67776653222111 11111111233444444 4788776553
Q ss_pred eEeec--------CCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 293 GVVES--------GGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 293 ~V~~N--------G~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
....+ ---+|-.||..++-+|+..++.|+.+...
T Consensus 70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 111 (315)
T 2ydy_A 70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSD 111 (315)
T ss_dssp ------------------CHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchH
Confidence 22111 11247789999999998888876655543
No 370
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=35.58 E-value=3.3e+02 Score=27.71 Aligned_cols=116 Identities=14% Similarity=0.029 Sum_probs=59.5
Q ss_pred HHHHHHHHhhccc--cCceEEeecChHH----HHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch
Q 016064 202 RKIIAMLSQDFIF--DGCTILVHGFSRV----VMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS 275 (396)
Q Consensus 202 ~~~Ia~~a~~~I~--dg~~ILT~~~S~~----V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds 275 (396)
-..+++...+.+. .+..|+.+|.++. -.-+-+.+++.|.+.+|+++...-..+.+.-.+.+.+.|+++. .+
T Consensus 36 g~a~a~~i~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~--~~- 112 (502)
T 3rss_A 36 GISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV--EQ- 112 (502)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE--SC-
T ss_pred HHHHHHHHHHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee--cc-
Confidence 3334444444443 3567777776542 1222233445587788886644312223334677888999875 11
Q ss_pred HHHHhcccCCEEEEcceeEeecCCeeccccHHHHHH-HhhhCCCcEEEe
Q 016064 276 AVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAL-VAHSMNKPVYVA 323 (396)
Q Consensus 276 av~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl-~Ak~~~vPvyV~ 323 (396)
.........|.|| |+++--|--=.--|.+.-.+ ..+..+.||+.+
T Consensus 113 ~~~~~~~~~dliV---DalfG~Gl~~~l~~~~~~~i~~iN~~~~~vvAv 158 (502)
T 3rss_A 113 FEPSILNEFDVVV---DAIFGTGLRGEITGEYAEIINLVNKSGKVVVSV 158 (502)
T ss_dssp CCGGGGGGCSEEE---EESCSTTCCSCCCHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccCCCCCEEE---EeCccCCCCCCCcHHHHHHHHHHHcCCCCEEEe
Confidence 1112346678765 77776653222233333222 235567777643
No 371
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=35.58 E-value=57 Score=31.60 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=57.6
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCch--hHHHHHHHHhC---------CCCEEEEc-c----hHHH
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRS--GLRLANELAKL---------DVPVKLLI-D----SAVA 278 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~e--G~~la~~L~~~---------GI~vtlI~-D----sav~ 278 (396)
.+.+||..|-++.+-..|.+... ....+|+++.-++..+ -.++...|.+. +-.+.++. | ..+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHT-TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 35689999998877666655542 4457888776554421 22333333221 12233322 2 1122
Q ss_pred HhcccCCEEEEcceeEeecC-----CeeccccHHHHHHHhhhCCCcEEEecccccc
Q 016064 279 YTMDEVDMVFVGADGVVESG-----GIINMMGTYQIALVAHSMNKPVYVAAESYKF 329 (396)
Q Consensus 279 ~~m~~vd~VlvGAd~V~~NG-----~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf 329 (396)
...++|.|+--|-.+-... --.|-.||..++-+|+. ++.-+|...+...
T Consensus 147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~ 200 (427)
T 4f6c_A 147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 200 (427)
T ss_dssp -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG
T ss_pred -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh
Confidence 3344555544332111000 01377899999999988 5555555544443
No 372
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=35.50 E-value=1.1e+02 Score=29.98 Aligned_cols=100 Identities=12% Similarity=0.173 Sum_probs=54.9
Q ss_pred CceEEeecChHHHHHHHHHHHH-----CC-CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchH---------HHHh
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ-----NK-KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSA---------VAYT 280 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~-----~g-k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsa---------v~~~ 280 (396)
...++|.|.+..+...++.+.+ .| .+-+|++.+ |.+.+ ..+.+...|+.+..++-.. +-..
T Consensus 127 ~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~--~~h~~--~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~ 202 (497)
T 3mc6_A 127 GCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPV--TAHAG--FDKAAYYFGMKLRHVELDPTTYQVDLGKVKKF 202 (497)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEET--TSCHH--HHHHHHHSCCEEEEECBCTTTCSBCTTTTGGG
T ss_pred CeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeC--CccHH--HHHHHHHcCCeEEEEecCcccCcCCHHHHHHH
Confidence 4678887877777777666543 23 113566643 44444 3344455698888876322 2222
Q ss_pred cccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 281 MDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 281 m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+.+-.++++....-...|.+.. +- .++-+|++++++++|
T Consensus 203 i~~~~~~v~~~~p~nptG~~~~-l~--~i~~la~~~g~~liv 241 (497)
T 3mc6_A 203 INKNTVLLVGSAPNFPHGIADD-IE--GLGKIAQKYKLPLHV 241 (497)
T ss_dssp CCSSEEEEEEETTCTTTCCCCS-CT--TTTTHHHHTTCCEEE
T ss_pred HhhCCEEEEEECCCCCCCcCCC-HH--HHHHHHHHhCCEEEE
Confidence 2222244433322223444433 22 577789999999998
No 373
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=35.35 E-value=61 Score=28.87 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=59.4
Q ss_pred CceEEeecChHH--HHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEcc------hHHHHhc--ccC
Q 016064 216 GCTILVHGFSRV--VMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLID------SAVAYTM--DEV 284 (396)
Q Consensus 216 g~~ILT~~~S~~--V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~D------sav~~~m--~~v 284 (396)
|.+.|+...+.- +..+.+...+.=..|+++.+++ .++.|.+ .||+|+.+.- ..++..+ +++
T Consensus 28 g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT~g--------Ta~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~~geI 99 (178)
T 1vmd_A 28 KRIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGT--------TGALLQEKLGLKVHRLKSGPLGGDQQIGAMIAEGKI 99 (178)
T ss_dssp CEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEECHH--------HHHHHHHHHCCCCEECSCGGGTHHHHHHHHHHTTSC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEchH--------HHHHHHHHhCceeEEEeecCCCCCchHHHHHHCCCc
Confidence 445555444432 3333333322212588887754 4677777 8999988742 2355555 789
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|+||.=.|-. |.--...-.+.+--+|-.++||++---.+
T Consensus 100 dlVInt~dPl---~~~~h~~D~~~IRR~A~~~~IP~~Tnlat 138 (178)
T 1vmd_A 100 DVLIFFWDPL---EPQAHDVDVKALIRIATVYNIPVAITRST 138 (178)
T ss_dssp CEEEEECCSS---SCCTTSCCHHHHHHHHHHTTCCEESSHHH
T ss_pred cEEEEccCcc---CCCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 9999754310 22222445688888999999999864333
No 374
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=35.20 E-value=2.2e+02 Score=26.79 Aligned_cols=101 Identities=8% Similarity=-0.003 Sum_probs=52.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc----------hHHHHhcc-c
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID----------SAVAYTMD-E 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D----------sav~~~m~-~ 283 (396)
...+++|.|.+..+..++..+.+.| -+|++.+ |.+.|... .+...|.++..++. ..+-..+. +
T Consensus 101 ~~~v~~t~g~~~al~~~~~~l~~~g--d~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 174 (406)
T 1xi9_A 101 PDDVRVTAAVTEALQLIFGALLDPG--DEILVPG--PSYPPYTG--LVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR 174 (406)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTT--CEEEEEE--SCCHHHHH--HHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT
T ss_pred HHHEEEcCChHHHHHHHHHHhCCCC--CEEEEcC--CCCccHHH--HHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcC
Confidence 3467777776776666666553334 3555543 45555443 33456877766542 12223332 3
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++. ..--..|.++..-=-..++-+|+++++++++
T Consensus 175 ~~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 175 TKAIAVI-NPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ceEEEEE-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3333332 1111233333322234667788999998876
No 375
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=35.17 E-value=1e+02 Score=25.74 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=47.8
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+|+|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+ +++ .-|--.+..+-+ ..
T Consensus 7 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~-----~~g~~~~~~l~~~~~ 78 (184)
T 3rqi_A 7 DKNFLVIDDNEVF-AGTLARGLERRGYAVRQAHNKDEALKLAGAEKFEFITVXLH--LGN-----DSGLSLIAPLCDLQP 78 (184)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHTTSCCSEEEECSE--ETT-----EESHHHHHHHHHHCT
T ss_pred CCeEEEEcCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHhhCCCCEEEEecc--CCC-----ccHHHHHHHHHhcCC
Confidence 3578888877653 33456677778888876666543332 2 45788888654 332 234444444333 45
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 79 ~~~ii~lt~~~ 89 (184)
T 3rqi_A 79 DARILVLTGYA 89 (184)
T ss_dssp TCEEEEEESSC
T ss_pred CCCEEEEeCCC
Confidence 79999988654
No 376
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=35.13 E-value=1.7e+02 Score=27.77 Aligned_cols=99 Identities=10% Similarity=0.094 Sum_probs=57.1
Q ss_pred ceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE--Ecc-hHHHHhcccCCEEEEcce
Q 016064 217 CTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL--LID-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 217 ~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl--I~D-sav~~~m~~vd~VlvGAd 292 (396)
.+|+..|-++.|-. +.....++|...+|.+.+-.+. +| .+..|.+...+..+ +.+ ......++.+|.||+-|-
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~--~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PG--VTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HH--HHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-Hh--HHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 57888884333222 2222334464456777775543 44 34566665444333 222 244566899999999876
Q ss_pred eEeecCC------eeccccHHHHHHHhhhCCC
Q 016064 293 GVVESGG------IINMMGTYQIALVAHSMNK 318 (396)
Q Consensus 293 ~V~~NG~------v~nkiGT~~lAl~Ak~~~v 318 (396)
.-...|. -.|--|+..++-.+++++.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p 117 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP 117 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 4444442 2455788888877777653
No 377
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=34.95 E-value=2.6e+02 Score=25.41 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=59.8
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-..+ +...++| .+|+++..++......+...+.+.|..+..+. | .++..++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG--ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356777778777654433 3444445 56777766554444455667777888887653 3 2233333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhhhC
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAHSM 316 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~ 316 (396)
+++|.+|-.|-.....+.+ +|-.|++.++-++..+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4789888766433332322 3667888888777654
No 378
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=34.81 E-value=1.1e+02 Score=28.49 Aligned_cols=77 Identities=18% Similarity=0.155 Sum_probs=43.5
Q ss_pred HHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE---EcchHHHHhcccCCEEEEcceeEeecCCeeccccHHH
Q 016064 232 LKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL---LIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQ 308 (396)
Q Consensus 232 L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl---I~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~ 308 (396)
+....++...+++++..+ |..+-....+++.+..=+|++ +...-+..+|..+|.+++.+ |+ .
T Consensus 229 ~~~l~~~~~~~~l~i~~g-~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S------g~-------~- 293 (384)
T 1vgv_A 229 LADIATTHQDIQIVYPVH-LNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS------GG-------I- 293 (384)
T ss_dssp HHHHHHHCTTEEEEEECC-BCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS------ST-------G-
T ss_pred HHHHHhhCCCeEEEEEcC-CCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC------cc-------h-
Confidence 333333345677776432 211112333444322225777 34466888899999988765 32 2
Q ss_pred HHHHhhhCCCcEEEec
Q 016064 309 IALVAHSMNKPVYVAA 324 (396)
Q Consensus 309 lAl~Ak~~~vPvyV~a 324 (396)
.+=|-.+|+||++.-
T Consensus 294 -~lEA~a~G~PvI~~~ 308 (384)
T 1vgv_A 294 -QEEAPSLGKPVLVMR 308 (384)
T ss_dssp -GGTGGGGTCCEEEES
T ss_pred -HHHHHHcCCCEEEcc
Confidence 345778899999753
No 379
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=34.65 E-value=71 Score=24.70 Aligned_cols=84 Identities=12% Similarity=0.038 Sum_probs=43.3
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- ..+..-..-|-..+..+-+ ..
T Consensus 3 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~--~~~~~~~~~g~~~~~~l~~~~~ 79 (140)
T 2qr3_A 3 LGTIIIVDDNKGV-LTAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNF--TSGINNGNEGLFWLHEIKRQYR 79 (140)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTT--TC-----CCHHHHHHHHHHHCT
T ss_pred CceEEEEeCCHHH-HHHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCc--CCCCCCCccHHHHHHHHHhhCc
Confidence 3567777766542 3445666777787777555432222 22 346777776532 1000001223333333333 35
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 80 ~~~ii~ls~~~ 90 (140)
T 2qr3_A 80 DLPVVLFTAYA 90 (140)
T ss_dssp TCCEEEEEEGG
T ss_pred CCCEEEEECCC
Confidence 79999987653
No 380
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=34.64 E-value=1.5e+02 Score=27.79 Aligned_cols=101 Identities=12% Similarity=0.033 Sum_probs=52.1
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch----------HHHHhcc-c
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS----------AVAYTMD-E 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds----------av~~~m~-~ 283 (396)
...+++|.|.+..+..++....+.|. +|++.+ |.+.+.. ..+...|..+..++.. .+-..+. +
T Consensus 91 ~~~i~~t~g~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 164 (385)
T 1b5p_A 91 PEETIVTVGGSQALFNLFQAILDPGD--EVIVLS--PYWVSYP--EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR 164 (385)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTHHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT
T ss_pred hHHEEEcCChHHHHHHHHHHhcCCCC--EEEEcC--CCchhHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC
Confidence 34677777766666666655433343 555543 4444433 3344568887776632 1222222 2
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..+|++. .---+.|.++.+-==..++-+|+++++.+++
T Consensus 165 ~~~v~~~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 165 TKALVVN-SPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEe-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2233321 1111234444333335677788999987776
No 381
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=34.62 E-value=96 Score=26.54 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=42.4
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhC-CC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSM-NK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~-~v 318 (396)
+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.|| +.++ -|--.+..+-+.. ++
T Consensus 2 ~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------lp~~-----~g~~~~~~lr~~~~~~ 69 (223)
T 2hqr_A 2 RVLLIEKNSVL-GGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSDK-----NALSFVSRIKEKHSSI 69 (223)
T ss_dssp CEEEECSCHHH-HHHHHHHHGGGTCCEEEESSHHHHHHHHTTSCCSEEE------ECCT-----THHHHHHHHHHHCTTS
T ss_pred EEEEEcCCHHH-HHHHHHHHHHCCcEEEEECCHHHHHHHHhcCCCCEEE------eCCC-----CHHHHHHHHHhCCCCC
Confidence 46777776643 3345666777888887665543322 22 3578877 3322 2444444443335 79
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 70 ~ii~lt~~~ 78 (223)
T 2hqr_A 70 VVLVSSDNP 78 (223)
T ss_dssp EEEEEESSC
T ss_pred cEEEEECCC
Confidence 999988653
No 382
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=34.59 E-value=66 Score=29.26 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=60.6
Q ss_pred cCceEEeecChHHHHHH-HHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEV-LKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~-L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.++|..|-|+-+-.. .+...++| .+|+++..++......++++|.+.|-++..+. | ..+..++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRG--CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778887877766443 34444545 56777765544334556777888887776653 3 2222222
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhhhC--CCcEEEe
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAHSM--NKPVYVA 323 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~~--~vPvyV~ 323 (396)
+++|.+|-.|- +...|.+ +|-.|++.+.-++..+ +..-+|.
T Consensus 106 g~iD~lv~~Ag-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 161 (283)
T 1g0o_A 106 GKLDIVCSNSG-VVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 161 (283)
T ss_dssp SCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEECCC-cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEE
Confidence 46787776653 2222221 3567888887766553 3344443
No 383
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=34.52 E-value=53 Score=30.02 Aligned_cols=99 Identities=11% Similarity=0.090 Sum_probs=53.4
Q ss_pred eEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE----cchHHHHhcccCCEEEEcce
Q 016064 218 TILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL----IDSAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI----~Dsav~~~m~~vd~VlvGAd 292 (396)
+||..|-|+-+-..|.+. .++| .|+++..+....... ...+ ++++ .|..+..++.++|.|+--|-
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~~~~~~~~~-----~~~~--~~~~~~Dl~~~~~~~~~~~~d~vih~a~ 72 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSSGNEEF-----VNEA--ARLVKADLAADDIKDYLKGAEEVWHIAA 72 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTS---CEEEECCCSSCCGGG-----SCTT--EEEECCCTTTSCCHHHHTTCSEEEECCC
T ss_pred EEEEECCCchHHHHHHHHHHhCC---CEEEEEcCCCCChhh-----cCCC--cEEEECcCChHHHHHHhcCCCEEEECCC
Confidence 577778877766555444 3445 444444333221111 1122 2222 23445666778888876553
Q ss_pred eEeecCC--------eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 293 GVVESGG--------IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 293 ~V~~NG~--------v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
....+.+ -+|-.||..++-+|+..+++-+|...+
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 73 NPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 2111111 136779999999999888865555444
No 384
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=34.46 E-value=26 Score=29.75 Aligned_cols=78 Identities=17% Similarity=0.085 Sum_probs=45.1
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhh-CCC
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHS-MNK 318 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~-~~v 318 (396)
+..+|+|+|..|.. ...+...|...|+.|....++.- .+-...|.||+..+ +++. -|. ....+.+. ..+
T Consensus 11 ~~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~-al~~~~dlvl~D~~--mp~~-----~g~-l~~~~~~~~~~~ 80 (196)
T 1qo0_D 11 RELQVLVLNPPGEV-SDALVLQLIRIGCSVRQCWPPPE-AFDVPVDVVFTSIF--QNRH-----HDE-IAALLAAGTPRT 80 (196)
T ss_dssp GGCEEEEESCTTHH-HHHHHHHHHHHTCEEEEECSCCS-SCSSCCSEEEEECC--SSTH-----HHH-HHHHHHHSCTTC
T ss_pred cCCeEEEEcCChhH-HHHHHHHHHHcCCeEEEecCchh-hCCCCCCEEEEeCC--CCcc-----chH-HHHHHhccCCCC
Confidence 34678888776653 33445666677887776665432 11235788877543 2221 144 33344444 679
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 81 ~ii~lt~~~ 89 (196)
T 1qo0_D 81 TLVALVEYE 89 (196)
T ss_dssp EEEEEECCC
T ss_pred CEEEEEcCC
Confidence 999987653
No 385
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=34.44 E-value=2.6e+02 Score=27.01 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=40.7
Q ss_pred CCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 238 NKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 238 ~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
+...++++++-. |...-++..+++....-+|.++.- .-+..+|..+|+|+..+ |+.+ +=|-
T Consensus 254 ~~~~~~~v~~~~-~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------------Gg~~--~EA~ 317 (403)
T 3ot5_A 254 SREDTELVYPMH-LNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------------GGVQ--EEAP 317 (403)
T ss_dssp HCTTEEEEEECC-SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------------HHHH--HHGG
T ss_pred hCCCceEEEecC-CCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------------ccHH--HHHH
Confidence 344577776522 221223333442222235666642 25778899999876432 5544 6788
Q ss_pred hCCCcEEEe
Q 016064 315 SMNKPVYVA 323 (396)
Q Consensus 315 ~~~vPvyV~ 323 (396)
.+|+|+++.
T Consensus 318 a~g~PvV~~ 326 (403)
T 3ot5_A 318 GMGVPVLVL 326 (403)
T ss_dssp GTTCCEEEC
T ss_pred HhCCCEEEe
Confidence 899999986
No 386
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=34.43 E-value=1.1e+02 Score=23.78 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=39.7
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeC-CCCCchhHHHHHHHHh-C--CCCEEEEcc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTE-GRPDRSGLRLANELAK-L--DVPVKLLID 274 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~E-srP~~eG~~la~~L~~-~--GI~vtlI~D 274 (396)
.|.+.++.......+......+..+.+++++ .-|...|..+++.|++ . .+++.+++.
T Consensus 29 ~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~ 89 (133)
T 2r25_B 29 NIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTA 89 (133)
T ss_dssp CEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEES
T ss_pred eEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEEC
Confidence 5666666666666666544444568888887 5588899999999986 3 467766654
No 387
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=34.43 E-value=22 Score=31.30 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=42.0
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeeccccHHH----HHHHhhhCCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQ----IALVAHSMNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~----lAl~Ak~~~v 318 (396)
+|.|+|-.-.+- +.+++.|.+.|.+++++.|.. .+..+|.+|+ +-|+-....+... +.-.+++.++
T Consensus 4 ~I~iiD~g~~n~-~si~~al~~~G~~~~v~~~~~---~l~~~D~lil------PG~g~~~~~~~~~~~~~~i~~~~~~~~ 73 (211)
T 4gud_A 4 NVVIIDTGCANI-SSVKFAIERLGYAVTISRDPQ---VVLAADKLFL------PGVGTASEAMKNLTERDLIELVKRVEK 73 (211)
T ss_dssp CEEEECCCCTTH-HHHHHHHHHTTCCEEEECCHH---HHHHCSEEEE------CCCSCHHHHHHHHHHTTCHHHHHHCCS
T ss_pred EEEEEECCCChH-HHHHHHHHHCCCEEEEECCHH---HHhCCCEEEE------CCCCCHHHHHHHHHhcChHHHHHHcCC
Confidence 355665322211 457889999999999987743 3567787766 2112211111111 1234556899
Q ss_pred cEEEecc
Q 016064 319 PVYVAAE 325 (396)
Q Consensus 319 PvyV~ae 325 (396)
||+-+|-
T Consensus 74 PvlGICl 80 (211)
T 4gud_A 74 PLLGICL 80 (211)
T ss_dssp CEEEETH
T ss_pred CEEEEch
Confidence 9997773
No 388
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=34.40 E-value=33 Score=33.59 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc-CceEEee-cChHHHHHHHHHHHHC--CCeeEEEEeCCCCCchhHHHHHHHHhCCCC
Q 016064 193 KFGEISYKARKIIAMLSQDFIFD-GCTILVH-GFSRVVMEVLKMAAQN--KKLFRVLCTEGRPDRSGLRLANELAKLDVP 268 (396)
Q Consensus 193 ~f~e~~~~a~~~Ia~~a~~~I~d-g~~ILT~-~~S~~V~~~L~~A~~~--gk~f~ViV~EsrP~~eG~~la~~L~~~GI~ 268 (396)
+|.+.+..+++++++..- ..+ .++|+|. |-+.....++...... |. +|.++.+... |.++.+.+.+.|+.
T Consensus 55 ~~~~~~~~ar~~la~ll~--~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd--~v~~~~~g~~--~~~~~~~a~~~G~~ 128 (377)
T 3e77_A 55 DFAKIINNTENLVRELLA--VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGR--CADYVVTGAW--SAKAAEEAKKFGTI 128 (377)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTC--EEEECCCSHH--HHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCCeEEEEcCchHHHHHHHHHhccCCCCCC--eEEEEECCHH--HHHHHHHHHHhCCc
Confidence 344455567777776432 133 3466654 4455556566655543 43 4444444322 56778888888977
Q ss_pred EEEEcch--------HHHHhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 269 VKLLIDS--------AVAYTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 269 vtlI~Ds--------av~~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+++++.. .+...+ ++...|.+- +.=.. -|+++.+ +|+.++++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~-h~et~-tG~~~pi-------i~~~~~~~~~v 182 (377)
T 3e77_A 129 NIVHPKLGSYTKIPDPSTWNLNPDASYVYYC-ANETV-HGVEFDF-------IPDVKGAVLVC 182 (377)
T ss_dssp EECSCCCSSSCSCCCGGGCCCCTTCSCEEEE-SEETT-TTEECSS-------CCCCTTCCEEE
T ss_pred eEEeccCCCcCCCCChHHhccCCCccEEEEe-CccCc-hheEchh-------hhccCCCEEEE
Confidence 7665411 111122 344454321 11111 2566776 37888999887
No 389
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=34.38 E-value=45 Score=29.87 Aligned_cols=106 Identities=11% Similarity=0.029 Sum_probs=56.4
Q ss_pred EEeecChHHHHHHHHHHHHCCCeeEEEEeCCCC---C--chhHHHHHHHHhCCCCEEEEc----ch-HHHHhcccCCEEE
Q 016064 219 ILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRP---D--RSGLRLANELAKLDVPVKLLI----DS-AVAYTMDEVDMVF 288 (396)
Q Consensus 219 ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP---~--~eG~~la~~L~~~GI~vtlI~----Ds-av~~~m~~vd~Vl 288 (396)
++-.|++..+...|.+..++-+.-+|.++.+.. . .-.+...+.|.+.|+++..+. +. .....+.++|.++
T Consensus 5 l~l~s~~~~~~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~ 84 (206)
T 3l4e_A 5 LFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIY 84 (206)
T ss_dssp EEEESCGGGCHHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEE
T ss_pred eEEeecccchHHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEE
Confidence 555576666666666553221123444444221 1 234667888999999998883 32 2334567888888
Q ss_pred EcceeEeecCCeeccccHHHHHHHhhhCCCcEEEec
Q 016064 289 VGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 289 vGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
+|-=..+.=...+.+.|-...-.-+-+.|+|++-.|
T Consensus 85 l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 85 VTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp ECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred ECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 852111110112333343333333334689998544
No 390
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=34.28 E-value=1.3e+02 Score=26.10 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=56.1
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-cc----hHHHHhc-------c
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-ID----SAVAYTM-------D 282 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~D----sav~~~m-------~ 282 (396)
|.+||..|-|+-+-..+ +...++| .+|+++-.|.......+.++|.+.|-.+.++ .| ..+..++ +
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G--~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAG--CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 35677777766554433 3344445 4677654554444455666676656555544 23 2333333 3
Q ss_pred cCCEEEEcceeEeecCC-------------eeccccHHHHHHHhhh----CCCcEEEecc
Q 016064 283 EVDMVFVGADGVVESGG-------------IINMMGTYQIALVAHS----MNKPVYVAAE 325 (396)
Q Consensus 283 ~vd~VlvGAd~V~~NG~-------------v~nkiGT~~lAl~Ak~----~~vPvyV~ae 325 (396)
++|.||--|- +...+. -+|-.|+..+.-.+.. .+.+-+|...
T Consensus 79 ~id~li~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 137 (244)
T 1edo_A 79 TIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIA 137 (244)
T ss_dssp CCSEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCEEEECCC-CCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 6788776552 222221 1356677777766644 2445555443
No 391
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=34.12 E-value=1.7e+02 Score=26.23 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=29.9
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
.|+..|..+....+|....+.+-.++|. |+=.+|...+.+.| .+.|||+..+.
T Consensus 7 ~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A---~~~gIp~~~~~ 60 (212)
T 3av3_A 7 AVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERA---ARENVPAFVFS 60 (212)
T ss_dssp EEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH---HHTTCCEEECC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH---HHcCCCEEEeC
Confidence 4565666666666665544432245554 33234555444443 56799998765
No 392
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.02 E-value=1.1e+02 Score=24.67 Aligned_cols=93 Identities=14% Similarity=0.096 Sum_probs=54.8
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-----cccCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-----MDEVDMVFVG 290 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-----m~~vd~VlvG 290 (396)
.+.|+..|++..=..+.+.+.+.| .+|++.|..|. -+..+.+.|+++.+ -|..-... +.++|.|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~-----~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRT-----RVDELRERGVRAVL-GNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEEE-SCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHHcCCCEEE-CCCCCHHHHHhcCcccCCEEEEE
Confidence 357888888776666666666555 46777777653 34567778987644 33322222 3677877765
Q ss_pred ceeEeecCCeeccccHHHHHHHhhhC--CCcEEEecc
Q 016064 291 ADGVVESGGIINMMGTYQIALVAHSM--NKPVYVAAE 325 (396)
Q Consensus 291 Ad~V~~NG~v~nkiGT~~lAl~Ak~~--~vPvyV~ae 325 (396)
... ..-+..++..|+.. ++++++-+.
T Consensus 79 ~~~---------~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 79 IPN---------GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp CSC---------HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCC---------hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 432 22334566667764 456555543
No 393
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=33.94 E-value=3.1e+02 Score=25.87 Aligned_cols=34 Identities=18% Similarity=0.026 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhhccccCceEEeecChHHHHHHHHHH
Q 016064 200 KARKIIAMLSQDFIFDGCTILVHGFSRVVMEVLKMA 235 (396)
Q Consensus 200 ~a~~~Ia~~a~~~I~dg~~ILT~~~S~~V~~~L~~A 235 (396)
..++.|+++.- .....+++|.|.+..+..++..+
T Consensus 65 ~l~~~la~~~g--~~~~~v~~~~g~t~a~~~~~~~~ 98 (432)
T 3a9z_A 65 TARASLAKMIG--GKPQDIIFTSGGTESNNLVIHST 98 (432)
T ss_dssp HHHHHHHHHHT--CCGGGEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--CCcCeEEEeCChHHHHHHHHHHH
Confidence 34445554321 22346777777677666555554
No 394
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=33.87 E-value=33 Score=31.34 Aligned_cols=67 Identities=12% Similarity=0.312 Sum_probs=41.2
Q ss_pred HHHHHhCCCCEEE--Ec-c----hHHHHhcccCCEEEEcceeEeecCCeecc-ccHHHHHHHhhhCCCcEEEecccccc
Q 016064 259 ANELAKLDVPVKL--LI-D----SAVAYTMDEVDMVFVGADGVVESGGIINM-MGTYQIALVAHSMNKPVYVAAESYKF 329 (396)
Q Consensus 259 a~~L~~~GI~vtl--I~-D----sav~~~m~~vd~VlvGAd~V~~NG~v~nk-iGT~~lAl~Ak~~~vPvyV~aes~Kf 329 (396)
.+.+.+.|++++. +. . .++..--.++|+|++|... .|++-.. .|+..-.+ .++.++||+|+-+...+
T Consensus 92 ~~~~~~~g~~~~~~~v~~~g~~~~~I~a~~~~~DliV~G~~g---~~~~~~~~~Gs~~~~v-l~~~~~PVlvv~~~~~~ 166 (294)
T 3loq_A 92 AQKIEAAGIKAEVIKPFPAGDPVVEIIKASENYSFIAMGSRG---ASKFKKILLGSVSEGV-LHDSKVPVYIFKHDMVV 166 (294)
T ss_dssp HHHHHHTTCEEEECSSCCEECHHHHHHHHHTTSSEEEEECCC---CCHHHHHHHCCHHHHH-HHHCSSCEEEECCCTTT
T ss_pred HHHHHHcCCCcceeEeeccCChhHheeeccCCCCEEEEcCCC---CccccceeeccHHHHH-HhcCCCCEEEecCcccc
Confidence 4455678999887 33 2 2331112689999999874 2222221 36655444 56667999999877654
No 395
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=33.80 E-value=93 Score=30.83 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=55.2
Q ss_pred ceEEeecChHHHHHHHHHHHHC------CCeeEEEEeCCCCCchhHHH-HHHHHhC----------CCCEEEEc------
Q 016064 217 CTILVHGFSRVVMEVLKMAAQN------KKLFRVLCTEGRPDRSGLRL-ANELAKL----------DVPVKLLI------ 273 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~------gk~f~ViV~EsrP~~eG~~l-a~~L~~~----------GI~vtlI~------ 273 (396)
.+++|-|.|..++..|+.|.+- .++-+|++.+. .+.|..+ +..+... .-.+..++
T Consensus 116 ~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~--~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 193 (476)
T 3i5t_A 116 RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYD--GYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRH 193 (476)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETT--CCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGG
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC--CcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccc
Confidence 5677777777788888777542 22446665543 3344333 2222111 11244444
Q ss_pred --c-----------hHHHHhccc---CCEEEEcceeEeecCCe-eccccHH-HHHHHhhhCCCcEEE
Q 016064 274 --D-----------SAVAYTMDE---VDMVFVGADGVVESGGI-INMMGTY-QIALVAHSMNKPVYV 322 (396)
Q Consensus 274 --D-----------sav~~~m~~---vd~VlvGAd~V~~NG~v-~nkiGT~-~lAl~Ak~~~vPvyV 322 (396)
+ ..+-..+.+ -+...+=.+.+..+||+ +-.-+-+ .++-+|+++++.+++
T Consensus 194 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~ 260 (476)
T 3i5t_A 194 AGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYIS 260 (476)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 233334431 12233333557777764 5555543 477889999998876
No 396
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=33.69 E-value=83 Score=25.22 Aligned_cols=99 Identities=9% Similarity=0.087 Sum_probs=62.5
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhc--ccCCEEEEcce
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGAD 292 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m--~~vd~VlvGAd 292 (396)
...|+.+|.+.....++....+. ..++|+ +++..|...|.. -.|+||.- .+. +..++ .++|.|++...
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~-~g~~vvg~~d~~~~~~g~~------i~g~pV~g-~~~-l~~~~~~~~id~viia~~ 74 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQG-KEFHPIAFIDDDRKKHKTT------MQGITIYR-PKY-LERLIKKHCISTVLLAVP 74 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS-SSEEEEEEECSCGGGTTCE------ETTEEEEC-GGG-HHHHHHHHTCCEEEECCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCcEEEEEEECCcccCCCE------ecCeEEEC-HHH-HHHHHHHCCCCEEEEeCC
Confidence 45789999999887777766554 357877 666666554532 24777654 333 44444 36888887532
Q ss_pred eEeecCCeeccccHHHHHHHhhhCCCcEEEeccccccc
Q 016064 293 GVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFA 330 (396)
Q Consensus 293 ~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~ 330 (396)
..- .---..+.-.|+.+++.|+++-..+.+.
T Consensus 75 ------~~~-~~~~~~i~~~l~~~gv~v~~vP~~~~~~ 105 (141)
T 3nkl_A 75 ------SAS-QVQKKVIIESLAKLHVEVLTIPNLDDLV 105 (141)
T ss_dssp ------TSC-HHHHHHHHHHHHTTTCEEEECCCHHHHH
T ss_pred ------CCC-HHHHHHHHHHHHHcCCeEEECCCHHHHh
Confidence 111 1122456667889999999887766553
No 397
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=33.65 E-value=94 Score=33.27 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=52.4
Q ss_pred EEEEeCCCC-Cc-----h-hHHHHHHHHhCCCCEEEEcchHHHHhc--c--cCCEEEEcceeEeecCCeeccccHHHHHH
Q 016064 243 RVLCTEGRP-DR-----S-GLRLANELAKLDVPVKLLIDSAVAYTM--D--EVDMVFVGADGVVESGGIINMMGTYQIAL 311 (396)
Q Consensus 243 ~ViV~EsrP-~~-----e-G~~la~~L~~~GI~vtlI~Dsav~~~m--~--~vd~VlvGAd~V~~NG~v~nkiGT~~lAl 311 (396)
+|+|+|..+ .. . -+.+...|.+.|..|....+..-+..+ . +.|+||+--+- .+ .-.+.-|-..+..
T Consensus 2 ~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~g~~v~~a~~g~~al~~~~~~~~~d~vilDi~l--p~-~~~~~~G~~ll~~ 78 (755)
T 2vyc_A 2 KVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQM--EH-PDEHQNVRQLIGK 78 (755)
T ss_dssp EEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTTCCCSEEEEECCC--CS-HHHHHHHHHHHHH
T ss_pred eEEEEeCCccccccccHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcCCCCcEEEEeCCC--Cc-ccccccHHHHHHH
Confidence 678888877 33 1 345588899999999999987665544 2 48999986442 22 1112333333333
Q ss_pred Hhhh-CCCcEEEeccccc
Q 016064 312 VAHS-MNKPVYVAAESYK 328 (396)
Q Consensus 312 ~Ak~-~~vPvyV~aes~K 328 (396)
+-+. .++||++++....
T Consensus 79 iR~~~~~iPIi~lTa~~~ 96 (755)
T 2vyc_A 79 LHERQQNVPVFLLGDREK 96 (755)
T ss_dssp HHHHSTTCCEEEEECHHH
T ss_pred HHHhCCCCCEEEEecCCc
Confidence 3333 4799999987644
No 398
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=33.56 E-value=51 Score=34.95 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=44.8
Q ss_pred CceEEeecChH--HHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CC--CCEEEEcchHHHHhc-ccCCEEE
Q 016064 216 GCTILVHGFSR--VVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LD--VPVKLLIDSAVAYTM-DEVDMVF 288 (396)
Q Consensus 216 g~~ILT~~~S~--~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~G--I~vtlI~Dsav~~~m-~~vd~Vl 288 (396)
+.+||..|-.+ .|...++.+++.+++++||.+|-.|.- ..++++.+ .| =.||+|.-.+=-.-+ .+||.+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A---~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA---VVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH---HHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH---HHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 35788887654 567778777777899999999998753 34444442 33 357777644322222 4677665
No 399
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.53 E-value=80 Score=28.63 Aligned_cols=68 Identities=24% Similarity=0.282 Sum_probs=37.8
Q ss_pred EEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----------chHHHHhc--ccCCE
Q 016064 219 ILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----------DSAVAYTM--DEVDM 286 (396)
Q Consensus 219 ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----------Dsav~~~m--~~vd~ 286 (396)
||.-|+.+....+|.. .+++-.++|..+=|.|...+.+.| .+.|||+..+. |..+...+ -++|.
T Consensus 17 vl~SG~gsnl~all~~-~~~~~~~eI~~Vis~~~a~~~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dl 92 (215)
T 3da8_A 17 VLASGTGSLLRSLLDA-AVGDYPARVVAVGVDRECRAAEIA---AEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDL 92 (215)
T ss_dssp EEESSCCHHHHHHHHH-SSTTCSEEEEEEEESSCCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSE
T ss_pred EEEeCChHHHHHHHHH-HhccCCCeEEEEEeCCchHHHHHH---HHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCE
Confidence 3433666666666644 333334566644455545454433 46799998885 23444444 35777
Q ss_pred EEEc
Q 016064 287 VFVG 290 (396)
Q Consensus 287 VlvG 290 (396)
+++-
T Consensus 93 ivla 96 (215)
T 3da8_A 93 VVSA 96 (215)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6663
No 400
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=33.38 E-value=42 Score=30.06 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=57.9
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-c---c-hHHHHhcccCCEEEEcc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-I---D-SAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~---D-sav~~~m~~vd~VlvGA 291 (396)
.+||..|-|+-+-..|.+... .+..+|+++..++... + ..|+ .++ . | ..+..++.++|.||--|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~-------~-~~~~--~~~~~Dl~d~~~~~~~~~~~d~vi~~a 71 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLG-TLAHEVRLSDIVDLGA-------A-EAHE--EIVACDLADAQAVHDLVKDCDGIIHLG 71 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGG-GTEEEEEECCSSCCCC-------C-CTTE--EECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred ceEEEECCCCHHHHHHHHHHH-hCCCEEEEEeCCCccc-------c-CCCc--cEEEccCCCHHHHHHHHcCCCEEEECC
Confidence 367888888776655544332 1237888886655321 0 1232 222 2 2 45666778888887655
Q ss_pred eeEeecCCe-----eccccHHHHHHHhhhCCCcEEEeccc
Q 016064 292 DGVVESGGI-----INMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 292 d~V~~NG~v-----~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
-.. ..... +|-.|+..+.-+|+..+++-+|...+
T Consensus 72 ~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 110 (267)
T 3ay3_A 72 GVS-VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110 (267)
T ss_dssp SCC-SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 322 11111 57789999999999888866665544
No 401
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=33.27 E-value=53 Score=32.16 Aligned_cols=77 Identities=12% Similarity=-0.040 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-CceEE-eecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCC
Q 016064 191 AEKFGEISYKARKIIAMLSQDFIFD-GCTIL-VHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVP 268 (396)
Q Consensus 191 i~~f~e~~~~a~~~Ia~~a~~~I~d-g~~IL-T~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~ 268 (396)
..+|.+.+..+++.+++..- ..+ .++|+ |-|-|.....++....+.|.+..+++++ . -|.+....+.+.| .
T Consensus 67 ~~~~~~~~~~ar~~la~ll~--~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~--~--~~~~~~~~a~~~G-~ 139 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLN--IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAG--Y--WAASAIKEAKKYC-A 139 (386)
T ss_dssp ------CCHHHHHHHHHHHT--CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESS--H--HHHHHHHHHTTTS-E
T ss_pred CHHHHHHHHHHHHHHHHHhC--CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCC--H--HHHHHHHHHHHhC-C
Confidence 34555556677777776432 133 35777 4566777766776665556543333332 2 2567777777889 8
Q ss_pred EEEEcc
Q 016064 269 VKLLID 274 (396)
Q Consensus 269 vtlI~D 274 (396)
|++++.
T Consensus 140 v~~v~~ 145 (386)
T 3qm2_A 140 PQIIDA 145 (386)
T ss_dssp EEEEEC
T ss_pred eEEEec
Confidence 887754
No 402
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=33.19 E-value=1.5e+02 Score=27.46 Aligned_cols=53 Identities=9% Similarity=0.126 Sum_probs=30.2
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
..+++|.|.+..+..++....+.|+ -+|++. .|.+.|...+ +...|.++..++
T Consensus 76 ~~v~~~~G~~~ai~~~~~~~~~~g~-d~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~ 128 (356)
T 1fg7_A 76 EQVLVSRGADEGIELLIRAFCEPGK-DAILYC--PPTYGMYSVS--AETIGVECRTVP 128 (356)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTT-CEEEEC--SSSCTHHHHH--HHHHTCEEEECC
T ss_pred HHEEEcCCHHHHHHHHHHHHhCCCC-CEEEEe--CCChHHHHHH--HHHcCCEEEEee
Confidence 4577776666666656555433342 356654 4777665543 233577776664
No 403
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=33.17 E-value=81 Score=27.21 Aligned_cols=56 Identities=4% Similarity=0.106 Sum_probs=30.8
Q ss_pred eEEeecChHHHHHHHHHHHHC-CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 218 TILVHGFSRVVMEVLKMAAQN-KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~-gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
+|.||.....+.+.|....++ ...++|+|++......-.++++++.+..-.+.++.
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~ 66 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH 66 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE
Confidence 445555566666777666554 34677776665443334455555554333455553
No 404
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=33.16 E-value=58 Score=30.87 Aligned_cols=106 Identities=16% Similarity=0.040 Sum_probs=58.2
Q ss_pred cCceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----c-hHHHHhcccCCEEE
Q 016064 215 DGCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----D-SAVAYTMDEVDMVF 288 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----D-sav~~~m~~vd~Vl 288 (396)
.+.+||..|-++-+-.-|. .+.++| ..+|+++..++...- ..|. .+-.++++. | ..+..++.++|.||
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~----~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELG-VNQVHVVDNLLSAEK----INVP-DHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CSEEEEECCCTTCCG----GGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CceEEEEECCCCCch----hhcc-CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 3568888898887655443 444445 257777754433210 1111 122344432 2 34555667777776
Q ss_pred EcceeEeecC--------CeeccccHHHHHHHhhhC-CCcEEEeccc
Q 016064 289 VGADGVVESG--------GIINMMGTYQIALVAHSM-NKPVYVAAES 326 (396)
Q Consensus 289 vGAd~V~~NG--------~v~nkiGT~~lAl~Ak~~-~vPvyV~aes 326 (396)
--|-....+. --+|-.||..++-+|+.. +++-+|.+.+
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5442211100 013567999999999988 8766665544
No 405
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.14 E-value=1.7e+02 Score=26.10 Aligned_cols=99 Identities=19% Similarity=0.144 Sum_probs=59.6
Q ss_pred ccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc------
Q 016064 214 FDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------ 281 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------ 281 (396)
.++.+||..|-|+-+-..+ +...++| .+|+++..|.......+..++.+.|-++.++. | ..+..++
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQG--WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3567788888777654443 4444445 56777766665556677888888887776653 2 2333333
Q ss_pred -ccCCEEEEcceeEeecCC-------------eeccccHHHHHHHhh
Q 016064 282 -DEVDMVFVGADGVVESGG-------------IINMMGTYQIALVAH 314 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~-------------v~nkiGT~~lAl~Ak 314 (396)
+++|.||-.|-.....+. -+|-.|++.+.-.+.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 148 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAV 148 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 478888876643222221 146678877765553
No 406
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=33.01 E-value=2.7e+02 Score=26.95 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=53.8
Q ss_pred CceEEeecChHHHHHHHHHHHH---------CCCeeEEEEeCCCCCchhHHH-HHHHHh-----CC-----CCEEEEc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ---------NKKLFRVLCTEGRPDRSGLRL-ANELAK-----LD-----VPVKLLI-- 273 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~---------~gk~f~ViV~EsrP~~eG~~l-a~~L~~-----~G-----I~vtlI~-- 273 (396)
..+++|-|.+..++..|+.+.+ .|+ -+|++.+ |.+.|... +..+.. .| ..+..++
T Consensus 134 ~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~-~~vi~~~--~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~ 210 (439)
T 2oat_A 134 HKVLPMNTGVEAGETACKLARKWGYTVKGIQKYK-AKIVFAA--GNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN 210 (439)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTC-CEEEEET--TCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCC-CeEEEEc--CCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC
Confidence 4577777777777777776642 132 4677766 44444332 222211 11 3555554
Q ss_pred c-hHHHHhcc-cCCEEEEcceeEeecCCe-eccccH-HHHHHHhhhCCCcEEE
Q 016064 274 D-SAVAYTMD-EVDMVFVGADGVVESGGI-INMMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 D-sav~~~m~-~vd~VlvGAd~V~~NG~v-~nkiGT-~~lAl~Ak~~~vPvyV 322 (396)
| .++-..+. .-.++|+ .+-+..+||+ .-.-+- ..++-+|+++++.+++
T Consensus 211 d~~~le~~l~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 262 (439)
T 2oat_A 211 DLPALERALQDPNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIA 262 (439)
T ss_dssp CHHHHHHHTTSTTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhCCCCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3 34444553 2113333 3455555443 323332 3577789999998876
No 407
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.98 E-value=1.2e+02 Score=23.69 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=43.6
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~v 318 (396)
+|+++|..|.. ...+...|...|..|....+..-+. .+ .+.|.||+..+- .+ .-|.-.+..+-+ ...+
T Consensus 6 ~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvllD~~l--~~-----~~g~~l~~~l~~~~~~~ 77 (137)
T 3cfy_A 6 RVLLVEDSTSL-AILYKQYVKDEPYDIFHVETGRDAIQFIERSKPQLIILDLKL--PD-----MSGEDVLDWINQNDIPT 77 (137)
T ss_dssp EEEEECSCTTH-HHHHHHHTTTSSSEEEEESSHHHHHHHHHHHCCSEEEECSBC--SS-----SBHHHHHHHHHHTTCCC
T ss_pred eEEEEeCCHHH-HHHHHHHHHhcCceEEEeCCHHHHHHHHHhcCCCEEEEecCC--CC-----CCHHHHHHHHHhcCCCC
Confidence 67788877664 3445666777788776655533222 12 457888886542 22 123333333332 3578
Q ss_pred cEEEeccc
Q 016064 319 PVYVAAES 326 (396)
Q Consensus 319 PvyV~aes 326 (396)
|+++++..
T Consensus 78 ~ii~ls~~ 85 (137)
T 3cfy_A 78 SVIIATAH 85 (137)
T ss_dssp EEEEEESS
T ss_pred CEEEEEec
Confidence 99888754
No 408
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=32.93 E-value=1.9e+02 Score=26.99 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=35.8
Q ss_pred ccccCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D 274 (396)
.++.|++||.+|-+..=...+.-|+..|- +|++++..+.. .+++ .+.|.+..+ .|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~--~~~~---~~lGa~~v~-~~ 227 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHK--KQDA---LSMGVKHFY-TD 227 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTT--HHHH---HHTTCSEEE-SS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHH---HhcCCCeec-CC
Confidence 46789999999975443444555555564 79988877654 2334 456777666 44
No 409
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=32.92 E-value=86 Score=32.11 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=55.2
Q ss_pred HHHhhccccCceEEeecChH-----HHHHHHH-HH---HHCCC--eeEEEEeCC-CCCchhH----------------HH
Q 016064 207 MLSQDFIFDGCTILVHGFSR-----VVMEVLK-MA---AQNKK--LFRVLCTEG-RPDRSGL----------------RL 258 (396)
Q Consensus 207 ~~a~~~I~dg~~ILT~~~S~-----~V~~~L~-~A---~~~gk--~f~ViV~Es-rP~~eG~----------------~l 258 (396)
+.|+.+|++|++|...|+.+ .+...|. ++ ...|. .+.++...+ .|..++. .-
T Consensus 18 eEAv~~IkdGd~V~~~Gf~~~G~P~~L~~ALa~R~~~~~~~g~~~~i~l~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~ 97 (514)
T 4eu9_A 18 ETASELIKHGDVVGTSGFTGAGYPKEVPKALAQRMEAAHDRGEKYQISLITGASTGPQLDGELAKANGVYFRSPFNTDAT 97 (514)
T ss_dssp HHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHHHHTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH
T ss_pred HHHHHhCCCCCEEEECCCCCCcCHHHHHHHHHHHHHHhhcCCcceeEEEEEecCcCcccccccccCCCEEEEEecCCCHH
Confidence 45567899999999987533 3444443 22 22343 344443322 3433322 11
Q ss_pred HHHHHhCC-CCEEEEcchHHHHhc-----ccCCEEEEcceeEeecCCee
Q 016064 259 ANELAKLD-VPVKLLIDSAVAYTM-----DEVDMVFVGADGVVESGGII 301 (396)
Q Consensus 259 a~~L~~~G-I~vtlI~Dsav~~~m-----~~vd~VlvGAd~V~~NG~v~ 301 (396)
.+++.+.| ++..-+.-+.++..+ .++|..++.+-..-++|.+.
T Consensus 98 ~R~~i~~G~~~y~p~~ls~~~~~~~~~~~~~iDVAlI~as~~De~Gnis 146 (514)
T 4eu9_A 98 MRNRINAGETEYFDNHLGQVAGRAVQGNYGKFNIALVEATAITEDGGIV 146 (514)
T ss_dssp HHHHHHTTSSEECCCCGGGHHHHHHHTTTCCCCEEEEEEEEECTTCCEE
T ss_pred HHHHHHcCCeeEECccccchHHHHHhccCCCceEEEEEEEcCCCCceEE
Confidence 24455556 333334446666433 47999999999999999885
No 410
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=32.83 E-value=74 Score=34.42 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=42.2
Q ss_pred CceEEeecChHHHH--HHHHHHHHCC---------CeeEEEEeCCCCCchhHHHHHHHHhCC--CCEEEEcchHHHHh--
Q 016064 216 GCTILVHGFSRVVM--EVLKMAAQNK---------KLFRVLCTEGRPDRSGLRLANELAKLD--VPVKLLIDSAVAYT-- 280 (396)
Q Consensus 216 g~~ILT~~~S~~V~--~~L~~A~~~g---------k~f~ViV~EsrP~~eG~~la~~L~~~G--I~vtlI~Dsav~~~-- 280 (396)
+.+||..|..+-++ ..++.++..| +..+||.+|..|... ...+.....| =.|++|.--+=-.-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~--~~l~~~~~Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI--VTLKYMNVRTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH--HHHHHHHHHTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH--HHHHHHHhcCCCCeEEEEeCchhhcccc
Confidence 45899988766443 3555554345 678999999987533 2223332334 34788774332222
Q ss_pred -----cccCCEEE
Q 016064 281 -----MDEVDMVF 288 (396)
Q Consensus 281 -----m~~vd~Vl 288 (396)
-.+||.+|
T Consensus 488 ~~~~~~ekVDIIV 500 (745)
T 3ua3_A 488 AKDRGFEQPDIIV 500 (745)
T ss_dssp HHHTTCCCCSEEE
T ss_pred cccCCCCcccEEE
Confidence 36888886
No 411
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=32.76 E-value=1.5e+02 Score=22.08 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=41.7
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---C
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS---M 316 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~---~ 316 (396)
+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.|++..+- .+ .-|.-.+..+-+. .
T Consensus 3 ~ilivdd~~~~-~~~l~~~L~~~~~~v~~~~~~~~a~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~~~~ 74 (124)
T 1mb3_A 3 KVLIVEDNELN-MKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQL--PE-----ISGLEVTKWLKEDDDLA 74 (124)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEESBC--SS-----SBHHHHHHHHHHSTTTT
T ss_pred EEEEEcCCHHH-HHHHHHHHHHcCcEEEEeCCHHHHHHHHhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHcCcccc
Confidence 56777766543 3445666777788777665533222 12 357888886542 22 2243333333332 3
Q ss_pred CCcEEEeccc
Q 016064 317 NKPVYVAAES 326 (396)
Q Consensus 317 ~vPvyV~aes 326 (396)
.+|+++++..
T Consensus 75 ~~~ii~~s~~ 84 (124)
T 1mb3_A 75 HIPVVAVTAF 84 (124)
T ss_dssp TSCEEEEC--
T ss_pred CCcEEEEECC
Confidence 6899998764
No 412
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=32.71 E-value=2.1e+02 Score=30.12 Aligned_cols=105 Identities=18% Similarity=0.168 Sum_probs=66.2
Q ss_pred CceEEeecChHHHHHHHHHHHHCCC-eeEEE----EeCCCCCch--------h----HHHHHHHHhC--CCCEEEEcc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKK-LFRVL----CTEGRPDRS--------G----LRLANELAKL--DVPVKLLID-- 274 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi----V~EsrP~~e--------G----~~la~~L~~~--GI~vtlI~D-- 274 (396)
+.+||.+|-++.=-.+++.....|. ++.++ |.+|....| | ..+++.|.+. ++.++.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I 405 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 405 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence 4689999988876666666666674 44444 111222111 2 3456677765 466666542
Q ss_pred -----------------hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccc
Q 016064 275 -----------------SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR 331 (396)
Q Consensus 275 -----------------sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~ 331 (396)
..+..+++++|.||.+.|..-. -+.+..+|..+++|++-++ ..|..
T Consensus 406 pm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~t---------R~~ln~~c~~~~~PlI~aa--lG~~G 468 (615)
T 4gsl_A 406 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES---------RWLPSLLSNIENKTVINAA--LGFDS 468 (615)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGG---------THHHHHHHHHTTCEEEEEE--ECSSE
T ss_pred cccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHH---------HHHHHHHHHHcCCeEEEEE--cccee
Confidence 2344567899999998875432 4678889999999998764 55543
No 413
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=32.64 E-value=1.5e+02 Score=25.41 Aligned_cols=80 Identities=19% Similarity=0.177 Sum_probs=47.6
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
..+|+++|..|.. ...+...|...|+.|....+..-+.- + ...|.||+..+- .+ .-|--.+..+-+ ..
T Consensus 7 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvllD~~l--~~-----~~g~~~~~~l~~~~~ 78 (233)
T 1ys7_A 7 SPRVLVVDDDSDV-LASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINM--PV-----LDGVSVVTALRAMDN 78 (233)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESSC--SS-----SCHHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhCCCEEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhcCC
Confidence 4578888887653 33456667778888876655433322 2 457888886532 22 234444444433 35
Q ss_pred CCcEEEeccccc
Q 016064 317 NKPVYVAAESYK 328 (396)
Q Consensus 317 ~vPvyV~aes~K 328 (396)
++|+++++....
T Consensus 79 ~~~ii~lt~~~~ 90 (233)
T 1ys7_A 79 DVPVCVLSARSS 90 (233)
T ss_dssp CCCEEEEECCCT
T ss_pred CCCEEEEEcCCC
Confidence 799999886543
No 414
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=32.56 E-value=1e+02 Score=26.84 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=45.6
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNK 318 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~v 318 (396)
.+|+++|..|.. ...+...|.+.|..|....+..-+. .+ ...|.||+..+- .+ .-|-..+..+-+..++
T Consensus 6 ~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvilD~~l--~~-----~~g~~~~~~lr~~~~~ 77 (238)
T 2gwr_A 6 QRILVVDDDASL-AEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLML--PG-----MNGIDVCRVLRADSGV 77 (238)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHTTCEEEEECCGGGHHHHHHHHCCSEEEEESSC--SS-----SCHHHHHHHHHTTCCC
T ss_pred CeEEEEeCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCCCC
Confidence 467777776643 3344566667787777665532222 22 357888876532 22 2344445555555689
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 78 ~ii~lt~~~ 86 (238)
T 2gwr_A 78 PIVMLTAKT 86 (238)
T ss_dssp CEEEEEETT
T ss_pred cEEEEeCCC
Confidence 999987543
No 415
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=32.56 E-value=87 Score=27.78 Aligned_cols=49 Identities=8% Similarity=0.154 Sum_probs=33.2
Q ss_pred HHHHHHHCCCeeEEEEeCCCCCc--hhHHHHHHHHhCCCCEEEEcc-hHHHHh
Q 016064 231 VLKMAAQNKKLFRVLCTEGRPDR--SGLRLANELAKLDVPVKLLID-SAVAYT 280 (396)
Q Consensus 231 ~L~~A~~~gk~f~ViV~EsrP~~--eG~~la~~L~~~GI~vtlI~D-sav~~~ 280 (396)
.|.+..++|++. |++..+-|.. -|..+++.|.+.|+++..||= |++.++
T Consensus 86 ~i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa 137 (232)
T 2qbu_A 86 MVAAELEDGRDV-AFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTAC 137 (232)
T ss_dssp HHHHHHHTTCCE-EEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHH
T ss_pred HHHHHHHCCCeE-EEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHH
Confidence 344444557664 4456688974 467778999999999999985 444443
No 416
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=32.52 E-value=66 Score=30.30 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=47.2
Q ss_pred CCeeEEEEeCCCCCc---hh-HHHHHHHHhCC-CCEEEEcch------HHH-HhcccCCEEEEcceeEeecCCeeccccH
Q 016064 239 KKLFRVLCTEGRPDR---SG-LRLANELAKLD-VPVKLLIDS------AVA-YTMDEVDMVFVGADGVVESGGIINMMGT 306 (396)
Q Consensus 239 gk~f~ViV~EsrP~~---eG-~~la~~L~~~G-I~vtlI~Ds------av~-~~m~~vd~VlvGAd~V~~NG~v~nkiGT 306 (396)
.++++|+++-+.... ++ ..|++.|.+.| +.|++..|. .+. -.+.+.|+||+.. +|..+..
T Consensus 2 ~~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~-----~~~~l~~--- 73 (281)
T 4e5v_A 2 RKPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDY-----NGDSWPE--- 73 (281)
T ss_dssp CCCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECC-----CSSCCCH---
T ss_pred CCceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeC-----CCCcCCH---
Confidence 356888877553332 22 34477777788 888888762 211 1367899998643 5665543
Q ss_pred HHHHHHhh--hCCCcEEEec
Q 016064 307 YQIALVAH--SMNKPVYVAA 324 (396)
Q Consensus 307 ~~lAl~Ak--~~~vPvyV~a 324 (396)
.+.+.+.+ +.|.+++++-
T Consensus 74 ~~~~~l~~yV~~Ggglv~~H 93 (281)
T 4e5v_A 74 ETNRRFLEYVQNGGGVVIYH 93 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEEG
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 33333332 3689999864
No 417
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.51 E-value=1.1e+02 Score=27.82 Aligned_cols=110 Identities=17% Similarity=0.075 Sum_probs=58.1
Q ss_pred ccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEE--cc----hHHHHhcccCC
Q 016064 214 FDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAK-LDVPVKLL--ID----SAVAYTMDEVD 285 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI--~D----sav~~~m~~vd 285 (396)
..|.+||..|-++-+-.-| +.+.++| .+|+++...+ .....+...+.+ .|-.++++ .| .++..++.++|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSA-SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSH-HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCc-ccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 4567888889887765544 3444445 4677664332 222334343332 23345554 33 23334455666
Q ss_pred EEEEcceeEeecCC-----eeccccHHHHHHHhh-hCCCcEEEeccc
Q 016064 286 MVFVGADGVVESGG-----IINMMGTYQIALVAH-SMNKPVYVAAES 326 (396)
Q Consensus 286 ~VlvGAd~V~~NG~-----v~nkiGT~~lAl~Ak-~~~vPvyV~aes 326 (396)
.||--|-....+.. -.|-.||..+.-+|+ ..++.-+|.+.+
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 66654422111001 135689999998887 466655554444
No 418
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=32.44 E-value=97 Score=28.28 Aligned_cols=103 Identities=11% Similarity=0.064 Sum_probs=53.4
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcc--cCCEEEEc
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMD--EVDMVFVG 290 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~--~vd~VlvG 290 (396)
.+||..|.|+-+-..| +.+.++| .+|+++...+...- ..|. .++.+... .| .++..++. ++|.||--
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~ 74 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG--LSVVVVDNLQTGHE----DAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHF 74 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCG----GGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCcCch----hhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 3678888877665544 3444445 56776643322110 1121 13332221 12 34555566 56666654
Q ss_pred ceeEeecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 291 ADGVVESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 291 Ad~V~~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|-...... --+|-.||..++-+|+..+++-+|.+.+
T Consensus 75 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 42211000 0135679999999999988765555444
No 419
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.43 E-value=88 Score=28.77 Aligned_cols=29 Identities=10% Similarity=0.066 Sum_probs=15.1
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D 274 (396)
+|.|+.+. .|..+++.+.+.|+.|.++..
T Consensus 4 ~Ililg~g---~~~~l~~a~~~~G~~v~~~~~ 32 (334)
T 2r85_A 4 RIATYASH---SALQILKGAKDEGFETIAFGS 32 (334)
T ss_dssp EEEEESST---THHHHHHHHHHTTCCEEEESC
T ss_pred EEEEECCh---hHHHHHHHHHhCCCEEEEEEC
Confidence 34444443 455555556666665555443
No 420
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=32.39 E-value=3.2e+02 Score=26.24 Aligned_cols=104 Identities=9% Similarity=0.101 Sum_probs=48.8
Q ss_pred CceEEeecChHHHHHHHHHHHH---------CCCeeEEEEeCCCCCchhHHH-HHHHHh-----CC-----CCEEEEc--
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQ---------NKKLFRVLCTEGRPDRSGLRL-ANELAK-----LD-----VPVKLLI-- 273 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~---------~gk~f~ViV~EsrP~~eG~~l-a~~L~~-----~G-----I~vtlI~-- 273 (396)
..+++|-|.+..+...|+.|.+ .| +-+|++.+ |.+.|... +..+.. .| ..+..++
T Consensus 123 ~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~g-r~~vi~~~--~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~ 199 (433)
T 1z7d_A 123 DKVLMMNTGAEANETAYKLCRKWGYEVKKIPEN-MAKIVVCK--NNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD 199 (433)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTT-CCEEEEET--TC--------------------------CEEEECTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCC-CCeEEEEe--CCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC
Confidence 4577777777777777776542 13 24777765 44555433 222221 11 2445443
Q ss_pred c-hHHHHhcccCCEEEEcceeEeecCCee-ccccH-HHHHHHhhhCCCcEEE
Q 016064 274 D-SAVAYTMDEVDMVFVGADGVVESGGII-NMMGT-YQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 D-sav~~~m~~vd~VlvGAd~V~~NG~v~-nkiGT-~~lAl~Ak~~~vPvyV 322 (396)
| .++-..+..-+..++=.+-+..+||++ -..+- -.++-+|+++++.+++
T Consensus 200 d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 251 (433)
T 1z7d_A 200 DLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVA 251 (433)
T ss_dssp CHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 334444521121222234455554443 23332 3577889999998876
No 421
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=32.33 E-value=93 Score=29.11 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=57.1
Q ss_pred cCceEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCch-h-HH----H--HHHHHhCCCCEEEE-cc----hHHHHh
Q 016064 215 DGCTILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRS-G-LR----L--ANELAKLDVPVKLL-ID----SAVAYT 280 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~e-G-~~----l--a~~L~~~GI~vtlI-~D----sav~~~ 280 (396)
.+.+||..|-|+-+-..|.+ +.+.++..+|+++...+... . .+ + ...+...++ .++ .| ..+..+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG--EVIAADINNPLDLRRL 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS--EEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc--eEEECCCCCHHHHHHh
Confidence 36788888888876554443 33422446777665433200 0 00 0 011222233 332 22 234444
Q ss_pred -cccCCEEEEcceeEeec-C-----CeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 281 -MDEVDMVFVGADGVVES-G-----GIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 281 -m~~vd~VlvGAd~V~~N-G-----~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
..++|.||-.|-.+-.. . --+|-.||..++-+|+..+++|+.++.
T Consensus 87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS 138 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS 138 (362)
T ss_dssp TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence 56777777655311100 0 014668999999999999999444443
No 422
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=32.17 E-value=1.4e+02 Score=25.55 Aligned_cols=78 Identities=21% Similarity=0.152 Sum_probs=46.3
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNK 318 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~v 318 (396)
.+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|...+..+-+..++
T Consensus 5 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvllD~~l--~~-----~~g~~~~~~l~~~~~~ 76 (230)
T 2oqr_A 5 TSVLIVEDEESL-ADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLML--PG-----MSGTDVCKQLRARSSV 76 (230)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHHHCCSEEEEESSC--SS-----SCHHHHHHHHHHHCSC
T ss_pred CeEEEEeCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHhccCCCEEEEECCC--CC-----CCHHHHHHHHHcCCCC
Confidence 467777776643 3344566777788777665533222 12 357888886542 22 2344444455455789
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 77 ~ii~lt~~~ 85 (230)
T 2oqr_A 77 PVIMVTARD 85 (230)
T ss_dssp SEEEEECCH
T ss_pred CEEEEeCCC
Confidence 999987653
No 423
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=32.12 E-value=86 Score=29.20 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=56.6
Q ss_pred CceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcc-----cCCEEEE
Q 016064 216 GCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMD-----EVDMVFV 289 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~-----~vd~Vlv 289 (396)
+.+||..|-|+-+-..|. .+.++| ..+|+++...+.... ...+....+.+-+-....+..++. ++|.||-
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECCSSGGG---GGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecCCCcch---hhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 467888888887655444 344445 145666654433210 111222224444444455556665 5787776
Q ss_pred cceeEeecC-C-----eeccccHHHHHHHhhhCCCcEEEecc
Q 016064 290 GADGVVESG-G-----IINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 290 GAd~V~~NG-~-----v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
-|-...... . -+|-.||..++-+|+..++.|+.+..
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS 163 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 163 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcc
Confidence 553221100 0 13667999999999888885555443
No 424
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=32.00 E-value=2.6e+02 Score=26.26 Aligned_cols=99 Identities=6% Similarity=-0.105 Sum_probs=51.0
Q ss_pred ccccCceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhc
Q 016064 212 FIFDGCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTM 281 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m 281 (396)
++...+.|+|-+.+..+..++..+ .+.| -+|++.+ |.+.+. ...+...|+++..++. ..+-..+
T Consensus 75 ~~~~~~~v~~~~Gt~a~~~~l~~~~~~~g--d~vl~~~--~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i 148 (399)
T 2oga_A 75 YCETDHAVGVNSGMDALQLALRGLGIGPG--DEVIVPS--HTYIAS--WLAVSATGATPVPVEPHEDHPTLDPLLVEKAI 148 (399)
T ss_dssp HTTSSEEEEESCHHHHHHHHHHHTTCCTT--CEEEEES--SSCTHH--HHHHHHTTCEEEEECBCSSSSSBCHHHHHHHC
T ss_pred HHCCCeEEEecCHHHHHHHHHHHhCCCCc--CEEEECC--CccHHH--HHHHHHCCCEEEEEecCCCCCCcCHHHHHHhc
Confidence 343335676655555555555444 2333 3566654 445553 3445567988887752 1233333
Q ss_pred ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 282 DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..-.++++ .. -..|.+.. --.++-+|+++++++++
T Consensus 149 ~~~~~~v~-~~--n~tG~~~~---l~~i~~l~~~~~~~li~ 183 (399)
T 2oga_A 149 TPRTRALL-PV--HLYGHPAD---MDALRELADRHGLHIVE 183 (399)
T ss_dssp CTTEEEEC-CB--CGGGCCCC---HHHHHHHHHHHTCEECE
T ss_pred CCCCeEEE-Ee--CCcCCccC---HHHHHHHHHHcCCEEEE
Confidence 32123333 11 12233221 35677888999988776
No 425
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=31.84 E-value=82 Score=24.99 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=39.6
Q ss_pred eEEeecChHHHHHHHHHHH----HCCCeeEEEEeCC-CCCchhHHHHHHHHh----CCCCEEEEcch
Q 016064 218 TILVHGFSRVVMEVLKMAA----QNKKLFRVLCTEG-RPDRSGLRLANELAK----LDVPVKLLIDS 275 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~----~~gk~f~ViV~Es-rP~~eG~~la~~L~~----~GI~vtlI~Ds 275 (396)
.|.+......+...+.... .....+.++++|- -|...|..+++.|++ .++++.+++..
T Consensus 32 ~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~ 98 (152)
T 3heb_A 32 EIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTT 98 (152)
T ss_dssp CEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESC
T ss_pred eEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 5666666666665554221 1245789998884 588999999999988 35677776653
No 426
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=31.84 E-value=2.9e+02 Score=25.01 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=51.3
Q ss_pred ceEEeecChHHHHHHHHHHH----HCCCeeEEEEeCCCCCchhHHH-HHHHHhCCCCEEEEcc--------hHHHHhccc
Q 016064 217 CTILVHGFSRVVMEVLKMAA----QNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLID--------SAVAYTMDE 283 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~----~~gk~f~ViV~EsrP~~eG~~l-a~~L~~~GI~vtlI~D--------sav~~~m~~ 283 (396)
.+++|.|.+..+..++..+. +.|. +|++.+ |...+... +..+...|+++..++. .++-..+.+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKGK--HILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEET--TCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCCC--EEEECC--CCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc
Confidence 46666665555555554443 3343 566653 33334333 4455678998888862 233333433
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
-.++++-...-...|.+.. --.++-+|+++++ +++
T Consensus 138 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 138 DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEE
T ss_pred CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEE
Confidence 2233332222223344433 3467788999998 655
No 427
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=31.82 E-value=3.3e+02 Score=25.65 Aligned_cols=111 Identities=11% Similarity=0.050 Sum_probs=62.2
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc----
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA---- 291 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA---- 291 (396)
.+|..+|....-...+....++...++++ |.+..|.. ...++++ .|+.+....|-.-..--+++|.|++..
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a~~---~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR-AQAALDK---YAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH-HHHHHHH---HTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH-HHHHHHH---hCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 36888888765555554444244567876 66665543 2233333 366566666533222224799998854
Q ss_pred -------------eeEeecCCeeccccHHHHHHHhhhCCCcEEEecccccccc
Q 016064 292 -------------DGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR 331 (396)
Q Consensus 292 -------------d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~ 331 (396)
+.+++-=-..+.-....+.-+|++.+++++.++-.+.|.+
T Consensus 100 h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p 152 (357)
T 3ec7_A 100 HADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDK 152 (357)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSH
T ss_pred HHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCH
Confidence 3333332333444455566677777777754555566665
No 428
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.81 E-value=1.7e+02 Score=26.15 Aligned_cols=100 Identities=20% Similarity=0.173 Sum_probs=61.0
Q ss_pred cCceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.++|..|-|+-+-. +.+...++| .+|+++..+........+.+|.+.|-.+..+. | .++..++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEG--ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4667777777765544 334444445 57887766666556677888888887766542 3 2333333
Q ss_pred ccCCEEEEcceeEeecCC-------------eeccccHHHHHHHhhhC
Q 016064 282 DEVDMVFVGADGVVESGG-------------IINMMGTYQIALVAHSM 316 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~-------------v~nkiGT~~lAl~Ak~~ 316 (396)
+++|.++-.|-.....+. -+|-.|++.++-++..+
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 132 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK 132 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377888776643322222 24677888888777654
No 429
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=31.76 E-value=1.5e+02 Score=27.72 Aligned_cols=105 Identities=21% Similarity=0.208 Sum_probs=60.0
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeC----CCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc----
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTE----GRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM---- 281 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~E----srP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m---- 281 (396)
+.+||..|-|+-+-..+ +...++| .+|+++. +|.......++..+.+.|..+..+. | .++..++
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G--~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAG--HRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 56777778776654444 3444445 4677543 3333333455666667777776654 2 3333344
Q ss_pred ---ccCCEEEEcceeEeecCC-------------eeccccHHHHHHHh----hhCCCcEEEe
Q 016064 282 ---DEVDMVFVGADGVVESGG-------------IINMMGTYQIALVA----HSMNKPVYVA 323 (396)
Q Consensus 282 ---~~vd~VlvGAd~V~~NG~-------------v~nkiGT~~lAl~A----k~~~vPvyV~ 323 (396)
+++|.||-.|- +...|. -+|-.|+..+.-++ +..+...+|.
T Consensus 83 ~~~g~iD~lVnnAG-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~ 143 (324)
T 3u9l_A 83 GEDGRIDVLIHNAG-HMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIW 143 (324)
T ss_dssp HHHSCCSEEEECCC-CCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCCCEEEECCC-cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 37888877663 333332 24778998888777 4445555554
No 430
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=31.69 E-value=3.4e+02 Score=25.77 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=51.8
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hHHHHhcc-----cCCEEE
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SAVAYTMD-----EVDMVF 288 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sav~~~m~-----~vd~Vl 288 (396)
+.|++-+.+..+..++..+. ++.-.|++. .|...+.. ..+...|.++..++- ..+-..+. ++.+|+
T Consensus 126 ~~i~~~sGs~a~~~al~~l~--~~gd~vl~~--~~~h~~~~--~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 126 GAIVFSTGYMANLGIISTLA--GKGEYVILD--ADSHASIY--DGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp EEEEESCHHHHHHHHHHHHS--CTTCEEEEE--TTCCHHHH--HHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEE
T ss_pred ceEEecCcHHHHHHHHHHhc--CCCCEEEEC--CcccHHHH--HHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEE
Confidence 56666555555555554443 333355553 34443332 334456877776642 23344443 344555
Q ss_pred EcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 289 VGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 289 vGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+ +.+...+|.+.. --.++-+|+++++.+++
T Consensus 200 ~--~~~~n~tG~~~~--l~~l~~l~~~~g~~li~ 229 (427)
T 2w8t_A 200 L--EGVYSMLGDIAP--LKEMVAVAKKHGAMVLV 229 (427)
T ss_dssp E--ESEETTTTEECC--HHHHHHHHHHTTCEEEE
T ss_pred E--cCCCCCCCCccC--HHHHHHHHHHcCCEEEE
Confidence 4 344443344433 45788889999998876
No 431
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=31.68 E-value=2.6e+02 Score=26.54 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=52.4
Q ss_pred ccCceEEeecChHHHH--HHHHHHHH--CC--------CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc------c-
Q 016064 214 FDGCTILVHGFSRVVM--EVLKMAAQ--NK--------KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI------D- 274 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~--~~L~~A~~--~g--------k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~------D- 274 (396)
....+++|-|.+..+. .++..... .| +.-+|++.+ |.+.+.. ..+...|.++..++ |
T Consensus 94 ~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~--p~y~~~~--~~~~~~g~~~~~v~~~~~g~d~ 169 (427)
T 3ppl_A 94 PVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV--PGYDRHF--SITERFGFEMISVPMNEDGPDM 169 (427)
T ss_dssp CGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE--SCCHHHH--HHHHHTTCEEEEEEEETTEECH
T ss_pred CcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC--CCcHHHH--HHHHHcCCEEEEeCCCCCCCCH
Confidence 4457888888877773 33333333 21 133566543 6665544 44556788777765 2
Q ss_pred hHHHHhcc--cCCEEEEcceeEeecCCeeccccH-------HHHHHHh-hhCCCcEEE
Q 016064 275 SAVAYTMD--EVDMVFVGADGVVESGGIINMMGT-------YQIALVA-HSMNKPVYV 322 (396)
Q Consensus 275 sav~~~m~--~vd~VlvGAd~V~~NG~v~nkiGT-------~~lAl~A-k~~~vPvyV 322 (396)
..+-..+. ++..|+ -+...-|..|+ ..++-+| +++++.+++
T Consensus 170 ~~l~~~l~~~~~~~v~-------~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 170 DAVEELVKNPQVKGMW-------VVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp HHHHHHTTSTTEEEEE-------ECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHhcCCCeEEE-------ECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 23334442 232332 22333445554 3666677 888887665
No 432
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=31.62 E-value=3.2e+02 Score=25.42 Aligned_cols=110 Identities=13% Similarity=0.085 Sum_probs=56.8
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCCCchhHHHHHHH-HhCCCCEEEEcchHHHHhcccCCEEEEcc----
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRPDRSGLRLANEL-AKLDVPVKLLIDSAVAYTMDEVDMVFVGA---- 291 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP~~eG~~la~~L-~~~GI~vtlI~Dsav~~~m~~vd~VlvGA---- 291 (396)
.|..+|....-...+....++...++++ |.+..|. -++++ .+.|+++....|-.-..--+++|.|++..
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~-----~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQE-----AAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHH-----HHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHH-----HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 4566666554444444333244567766 5554332 12233 34577666666533222224589888854
Q ss_pred -------------eeEeecCCeeccccHHHHHHHhhhCCCcEEEeccccccccc
Q 016064 292 -------------DGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARL 332 (396)
Q Consensus 292 -------------d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes~Kf~~~ 332 (396)
+.+++-=-..+.-....+.-+|++.+++++.++..+.|.+.
T Consensus 79 h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~ 132 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSG 132 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHH
Confidence 22222222333444555666677777777555556666653
No 433
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=31.59 E-value=1e+02 Score=23.33 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=41.6
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~v 318 (396)
+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ .+.|.|++..+- .+ .-|--.+..+-+ ..++
T Consensus 5 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~~ 76 (124)
T 1srr_A 5 KILIVDDQSGI-RILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKI--PG-----MDGIEILKRMKVIDENI 76 (124)
T ss_dssp EEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHHHHCCSEEEEESCC--TT-----CCHHHHHHHHHHHCTTC
T ss_pred eEEEEeCCHHH-HHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEecCC--CC-----CCHHHHHHHHHHhCCCC
Confidence 56677765532 3344556666777776555432222 12 357888886532 21 123333333332 4679
Q ss_pred cEEEecccc
Q 016064 319 PVYVAAESY 327 (396)
Q Consensus 319 PvyV~aes~ 327 (396)
|+++++...
T Consensus 77 ~ii~~s~~~ 85 (124)
T 1srr_A 77 RVIIMTAYG 85 (124)
T ss_dssp EEEEEESSC
T ss_pred CEEEEEccC
Confidence 999987643
No 434
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=31.52 E-value=2.3e+02 Score=23.70 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCCEEEEc-chH-HH---HhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 257 RLANELAKLDVPVKLLI-DSA-VA---YTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 257 ~la~~L~~~GI~vtlI~-Dsa-v~---~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.++..|...|++|..+. |.. .. ..+.+=|.||+ +...|.. .-+..++-.||..|+|+++++..
T Consensus 56 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~----iS~sG~t---~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 56 FLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIG----VSVWRYL---RDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp HHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEE----ECCSSCC---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEE----EeCCCCC---HHHHHHHHHHHHCCCCEEEEeCC
Confidence 34556666788888877 432 22 22345566654 2334532 44777888999999999998854
No 435
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=31.41 E-value=89 Score=27.68 Aligned_cols=21 Identities=5% Similarity=0.158 Sum_probs=13.7
Q ss_pred HHHHHHHHHCCCeeEEEEeCC
Q 016064 229 MEVLKMAAQNKKLFRVLCTEG 249 (396)
Q Consensus 229 ~~~L~~A~~~gk~f~ViV~Es 249 (396)
..+++...+.|-..+|+++++
T Consensus 18 ~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 18 IKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp HHHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHHCCCEEEEEEChh
Confidence 445556666677777777765
No 436
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=31.37 E-value=1.8e+02 Score=22.47 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=42.8
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh---
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS--- 315 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~--- 315 (396)
.+|+|+|..|.. ...+...|.+.|+.|....+..-+. .+ ...|.||+..+- .+ .-|--.+..+-+.
T Consensus 4 ~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi~D~~l--~~-----~~g~~~~~~l~~~~~~ 75 (138)
T 3c3m_A 4 YTILVVDDSPMI-VDVFVTMLERGGYRPITAFSGEECLEALNATPPDLVLLDIMM--EP-----MDGWETLERIKTDPAT 75 (138)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SS-----SCHHHHHHHHHHSTTT
T ss_pred ceEEEEeCCHHH-HHHHHHHHHHcCceEEEeCCHHHHHHHHhccCCCEEEEeCCC--CC-----CCHHHHHHHHHcCccc
Confidence 467777766543 3344566677787777655432222 22 357888886542 22 2244334444332
Q ss_pred CCCcEEEeccc
Q 016064 316 MNKPVYVAAES 326 (396)
Q Consensus 316 ~~vPvyV~aes 326 (396)
.++|+++++..
T Consensus 76 ~~~~ii~ls~~ 86 (138)
T 3c3m_A 76 RDIPVLMLTAK 86 (138)
T ss_dssp TTSCEEEEESS
T ss_pred CCCCEEEEECC
Confidence 36899988754
No 437
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=31.33 E-value=67 Score=28.50 Aligned_cols=75 Identities=9% Similarity=0.103 Sum_probs=44.2
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeec-------cccHHHHHHHh
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIIN-------MMGTYQIALVA 313 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~n-------kiGT~~lAl~A 313 (396)
+.+|.|++. +..- ......|.+.|+.+.+++... .+.++|.++++ |+--. ..+...+.-.+
T Consensus 23 ~~~I~il~~-~~~~-~~~~~~l~~~G~~~~~~~~~~---~l~~~Dglil~-------GG~~~~~~~~~~~~~~~~~i~~~ 90 (219)
T 1q7r_A 23 NMKIGVLGL-QGAV-REHVRAIEACGAEAVIVKKSE---QLEGLDGLVLP-------GGESTTMRRLIDRYGLMEPLKQF 90 (219)
T ss_dssp CCEEEEESC-GGGC-HHHHHHHHHTTCEEEEECSGG---GGTTCSEEEEC-------CCCHHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEEEeC-CCCc-HHHHHHHHHCCCEEEEECCHH---HHhhCCEEEEC-------CCChHHHHHHhhhhHHHHHHHHH
Confidence 456767754 2211 345688889999999888642 35678887773 33111 12222222334
Q ss_pred hhCCCcEEEecccc
Q 016064 314 HSMNKPVYVAAESY 327 (396)
Q Consensus 314 k~~~vPvyV~aes~ 327 (396)
.+.++|++-+|--+
T Consensus 91 ~~~~~PilGIC~G~ 104 (219)
T 1q7r_A 91 AAAGKPMFGTCAGL 104 (219)
T ss_dssp HHTTCCEEEETTHH
T ss_pred HHcCCeEEEECHHH
Confidence 45799999888543
No 438
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=31.32 E-value=67 Score=30.54 Aligned_cols=96 Identities=11% Similarity=-0.045 Sum_probs=59.7
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEE-EeCCCC-CchhHHHHHH--HHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVL-CTEGRP-DRSGLRLANE--LAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~Vi-V~EsrP-~~eG~~la~~--L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
.-+|...|.++.+-+.+.++..+...+++. +++..+ ...|...... +...|++++ .| +..++.++|.||--
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~--~d--l~~ll~~aDVvIDF- 95 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRIT--DD--PESAFSNTEGILDF- 95 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCB--SC--HHHHTTSCSEEEEC-
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceee--CC--HHHHhcCCCEEEEc-
Confidence 357899997777777777777667788877 666543 3345443211 113455543 23 34455677766522
Q ss_pred eeEeecCCeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 292 DGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 292 d~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
-+.-.++..+..|.++|+|+++.+-
T Consensus 96 ---------T~p~a~~~~~~~~l~~Gv~vViGTT 120 (288)
T 3ijp_A 96 ---------SQPQASVLYANYAAQKSLIHIIGTT 120 (288)
T ss_dssp ---------SCHHHHHHHHHHHHHHTCEEEECCC
T ss_pred ---------CCHHHHHHHHHHHHHcCCCEEEECC
Confidence 2455677778888889999887653
No 439
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=31.30 E-value=1.3e+02 Score=29.08 Aligned_cols=113 Identities=18% Similarity=0.159 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHhhccccC-ceEE-eecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEE
Q 016064 193 KFGEISYKARKIIAMLSQDFIFDG-CTIL-VHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVK 270 (396)
Q Consensus 193 ~f~e~~~~a~~~Ia~~a~~~I~dg-~~IL-T~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vt 270 (396)
+|.+....+++.+++..- ..+. ++|+ |-|-+.....++.... .|.+..++++. .-|++....+.+.|++|+
T Consensus 47 ~~~~~~~~~r~~la~ll~--~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~----~~~~~~~~~a~~~G~~v~ 119 (361)
T 3m5u_A 47 VFEEVHFGAQEKAKKLYE--LNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTG----VWTKKAIKEAQILGVNVK 119 (361)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECS----HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCC----HHHHHHHHHHHHcCCceE
Confidence 344455567777776431 1223 5665 6666666666666655 45544444443 236677777888899999
Q ss_pred EEcchHHHH---h----c-ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 271 LLIDSAVAY---T----M-DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 271 lI~Dsav~~---~----m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+++...-+. . + ++...|.+ ++.=...|.+... ++++ +++|+|
T Consensus 120 ~~~~~~~g~~~~~~~~~l~~~t~lv~~-~~~e~~tG~~~~~--------i~~~-~~~~~v 169 (361)
T 3m5u_A 120 TVASSEESNFDHIPRVEFSDNADYAYI-CSNNTIYGTQYQN--------YPKT-KTPLIV 169 (361)
T ss_dssp EEEECTTTTSCSCCCCCCCTTSSEEEE-ESEETTTTEECSS--------CCCC-SSCEEE
T ss_pred EEecccCcCCCcCChhhcCCCCCEEEE-eCCCCCcceeCCc--------cccc-CCEEEE
Confidence 986332221 0 2 34445544 3333333655453 2343 888777
No 440
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=31.21 E-value=54 Score=29.11 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=45.2
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEE-cceeEeecCCeeccccHHHHHHHhhhCCCc
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFV-GADGVVESGGIINMMGTYQIALVAHSMNKP 319 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~Vlv-GAd~V~~NG~v~nkiGT~~lAl~Ak~~~vP 319 (396)
..+|.+.+....+ -..+++.|.+.|..+.+++...-..-+.++|.+|+ |.. .|++........+.-.+.+.++|
T Consensus 13 ~~~i~~id~~~~~-~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~----p~~~~~~~~~~~l~~~~~~~~~P 87 (212)
T 2a9v_A 13 MLKIYVVDNGGQW-THREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGA----PNIDEELDKLGSVGKYIDDHNYP 87 (212)
T ss_dssp CCBEEEEEESCCT-TCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEEC----SCGGGTGGGHHHHHHHHHHCCSC
T ss_pred cceEEEEeCCCcc-HHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCC----CCCCcccccchhHHHHHHhCCCC
Confidence 3466766655444 33578888889988888775321122345887766 331 22333321222233334578999
Q ss_pred EEEec
Q 016064 320 VYVAA 324 (396)
Q Consensus 320 vyV~a 324 (396)
++-+|
T Consensus 88 iLGIC 92 (212)
T 2a9v_A 88 ILGIC 92 (212)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99777
No 441
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=31.11 E-value=35 Score=33.83 Aligned_cols=68 Identities=12% Similarity=0.128 Sum_probs=44.6
Q ss_pred CceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGA 291 (396)
+..|+.+|-..+=+...+.++++| .+|.+.|+++...|. ..|. .|+++.+=.+. ...+..+|.|+++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G--~~v~~~D~~~~~~~~---~~l~-~G~~~~~g~~~--~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARG--VTPRVMDTRMTPPGL---DKLP-EAVERHTGSLN--DEWLMAADLIVASP 72 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTT--CCCEEEESSSSCTTG---GGSC-TTSCEEESSCC--HHHHHTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC--CEEEEEECCCCcchh---HHhh-CCCEEEECCCc--HHHhccCCEEEeCC
Confidence 567888887776555555555545 578888998776554 4466 79988764432 22234788888865
No 442
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=31.10 E-value=66 Score=24.78 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=41.5
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEE-EEcch--HHHHhc-ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVK-LLIDS--AVAYTM-DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SM 316 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vt-lI~Ds--av~~~m-~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~ 316 (396)
++|+++|..|.. ...+...|.+.|..+. ...+. ++..+- ...|.||+..+- .+ .-|-..+..+-+ ..
T Consensus 2 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~~~ 73 (134)
T 3f6c_A 2 LNAIIIDDHPLA-IAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDI--PG-----VNGIQVLETLRKRQY 73 (134)
T ss_dssp EEEEEECCCHHH-HHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTC--SS-----SCHHHHHHHHHHTTC
T ss_pred eEEEEEcCCHHH-HHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCC--CC-----CChHHHHHHHHhcCC
Confidence 566777766543 3344566667776665 33332 222221 467888887643 21 223333333332 35
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
++|+++++...
T Consensus 74 ~~~ii~~s~~~ 84 (134)
T 3f6c_A 74 SGIIIIVSAKN 84 (134)
T ss_dssp CSEEEEEECC-
T ss_pred CCeEEEEeCCC
Confidence 68999887654
No 443
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=31.10 E-value=40 Score=29.00 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=42.9
Q ss_pred cChHHHHHHHHHHHH-CCC--eeEEEEeCCCCCchh----HHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEc
Q 016064 223 GFSRVVMEVLKMAAQ-NKK--LFRVLCTEGRPDRSG----LRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVG 290 (396)
Q Consensus 223 ~~S~~V~~~L~~A~~-~gk--~f~ViV~EsrP~~eG----~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvG 290 (396)
|+|...+.++++..+ .|. .|+|.-.-+.|+..| .+..+.|.+.||+....+-.--...+...|.||.=
T Consensus 16 cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIl~M 90 (161)
T 3jvi_A 16 CRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFDYIFAM 90 (161)
T ss_dssp SHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHHCSEEEES
T ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhcCCCEEEEe
Confidence 458889999988654 343 588887777776555 45578889999986322211111234567777653
No 444
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=31.09 E-value=1.3e+02 Score=26.57 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=30.0
Q ss_pred cccCCEEEEcceeEeecC-Cee-ccccHHHHHHHhhhCCCcEEEeccccc
Q 016064 281 MDEVDMVFVGADGVVESG-GII-NMMGTYQIALVAHSMNKPVYVAAESYK 328 (396)
Q Consensus 281 m~~vd~VlvGAd~V~~NG-~v~-nkiGT~~lAl~Ak~~~vPvyV~aes~K 328 (396)
-.++|++++|..+- | ++- --.|+..-.++ ++.++||+|+-+.++
T Consensus 107 ~~~~dliV~G~~g~---~~~~~~~~~Gs~~~~v~-~~a~~PVlvv~~~~~ 152 (268)
T 3ab8_A 107 ARAADLLVLGRSGE---AHGDGFGGLGSTADRVL-RASPVPVLLAPGEPV 152 (268)
T ss_dssp HTTCSEEEEESSCT---TSCTTCCSCCHHHHHHH-HHCSSCEEEECSSCC
T ss_pred ccCCCEEEEeccCC---CccccccccchhHHHHH-HhCCCCEEEECCCCC
Confidence 36899999999852 2 222 23677666554 667899999876554
No 445
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=31.04 E-value=37 Score=31.66 Aligned_cols=107 Identities=17% Similarity=0.095 Sum_probs=51.8
Q ss_pred CceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeE
Q 016064 216 GCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGV 294 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V 294 (396)
+.+||..|.++-+-..|. .+.++| .+|+++...+...-..+ ..+.. +-.+.++.-...-..+.++|.||--|-..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG--HEVTVVDNFFTGRKRNV-EHWIG-HENFELINHDVVEPLYIEVDQIYHLASPA 102 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCGGGT-GGGTT-CTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC--CEEEEEeCCCccchhhh-hhhcc-CCceEEEeCccCChhhcCCCEEEECcccc
Confidence 567888888877655443 344445 56776654332111111 11111 12344432111111234455555433211
Q ss_pred eec---C-----CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 295 VES---G-----GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 295 ~~N---G-----~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
... . --+|-.||..++-+|+..++.|+.+...
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 142 (343)
T 2b69_A 103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS 142 (343)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcH
Confidence 000 0 0146678999999998888876665543
No 446
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=31.04 E-value=1.5e+02 Score=27.38 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=58.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc---------c-hHHHHhc-cc
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI---------D-SAVAYTM-DE 283 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~---------D-sav~~~m-~~ 283 (396)
...+++|.|.+..+..++..+.+.|. +|++.+ |.+.|.. ..+...|.++..++ | ..+-..+ ++
T Consensus 81 ~~~v~~~~g~~~a~~~~~~~l~~~gd--~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 154 (375)
T 3op7_A 81 PEQILQTNGATGANLLVLYSLIEPGD--HVISLY--PTYQQLY--DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPT 154 (375)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SSCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT
T ss_pred hhhEEEcCChHHHHHHHHHHhcCCCC--EEEEeC--CCchhHH--HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccC
Confidence 34677777767766666655543343 555543 5555533 33556787776654 2 2333334 35
Q ss_pred CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 284 VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 284 vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
+..|++- ..-...|.+..+---..++-+|+++++++++
T Consensus 155 ~~~v~~~-~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 155 TKMICIN-NANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp CCEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CeEEEEc-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5566553 1223345555544456778889999998887
No 447
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=31.03 E-value=82 Score=28.59 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=58.8
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.++|..|-|+-+-..+ +...++| .+|+++..+.......++.++.+.|-.+..+. | .++..++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAG--AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467777778777654433 3444445 57777766555556677888888887777653 2 2333333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHh
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVA 313 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~A 313 (396)
+++|.+|-.|- +...+.+ +|-.|++.+.-++
T Consensus 105 g~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 148 (269)
T 4dmm_A 105 GRLDVLVNNAG-ITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAA 148 (269)
T ss_dssp SCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 37888877663 3333322 3667887777655
No 448
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=31.00 E-value=1.7e+02 Score=26.88 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=38.7
Q ss_pred ccccCceEEeec-Ch-HHHHHHHHHHHHCCCeeEEEEeCCCCCch--hHHHHHHHHhCCCCEEEEcc
Q 016064 212 FIFDGCTILVHG-FS-RVVMEVLKMAAQNKKLFRVLCTEGRPDRS--GLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 212 ~I~dg~~ILT~~-~S-~~V~~~L~~A~~~gk~f~ViV~EsrP~~e--G~~la~~L~~~GI~vtlI~D 274 (396)
++..+..++..+ .. ..+...+.+..++|++.-+ +.-+-|..- |..+++.|.+.||++.+||=
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~G~~Va~-L~~GDP~iyg~~~~l~~~l~~~gi~veviPG 112 (264)
T 3ndc_A 47 HCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDVAR-LHSGDLSIWSAMGEQLRRLRALNIPYDVTPG 112 (264)
T ss_dssp GSCTTCEEEECTTSCHHHHHHHHHHHHHHTCCEEE-EESBCTTSSCSHHHHHHHHHHTTCCEEEECC
T ss_pred hcCCCCEEEecCCCCHHHHHHHHHHHHHCCCeEEE-EeCCCCccccHHHHHHHHHHhCCCCEEEeCC
Confidence 444444444432 11 2234444444455876544 457888744 56789999999999999995
No 449
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=30.99 E-value=1.8e+02 Score=22.50 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=0.0
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhc-----ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTM-----DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m-----~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
...+|+++|..|.. ...+...|.+.|..|....+..-+.-. ...|.||+.. ..-..-|...+..+-+
T Consensus 2 ~~~~ilivdd~~~~-~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~-------~l~~~~g~~~~~~l~~ 73 (143)
T 3jte_A 2 SLAKILVIDDESTI-LQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDM-------KMPKLSGMDILREIKK 73 (143)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEES-------CCSSSCHHHHHHHHHH
T ss_pred CCCEEEEEcCCHHH-HHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeC-------CCCCCcHHHHHHHHHH
Q ss_pred hC-CCcEEEeccc
Q 016064 315 SM-NKPVYVAAES 326 (396)
Q Consensus 315 ~~-~vPvyV~aes 326 (396)
.+ ++|+++++..
T Consensus 74 ~~~~~~ii~ls~~ 86 (143)
T 3jte_A 74 ITPHMAVIILTGH 86 (143)
T ss_dssp HCTTCEEEEEECT
T ss_pred hCCCCeEEEEECC
No 450
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=30.98 E-value=1.5e+02 Score=26.85 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=60.6
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.++|..|-|+-+-..+ +...++| .+|+++..++......++.+|.+.|-.+..+. | ..+..++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEG--AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467777777776554433 4444445 57887777665556677888988888776653 3 2233333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhhh
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAHS 315 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~ 315 (396)
+++|.+|-.|- +...+.+ +|-.|++.+.-.+..
T Consensus 108 g~iD~lvnnAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 153 (271)
T 3v2g_A 108 GGLDILVNSAG-IWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASR 153 (271)
T ss_dssp SCCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCcEEEECCC-CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 37888887663 3333321 366788777766644
No 451
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.97 E-value=1e+02 Score=24.41 Aligned_cols=79 Identities=11% Similarity=0.045 Sum_probs=41.9
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHh-CCCCEE-EEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAK-LDVPVK-LLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~-~GI~vt-lI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
..+|+++|..|.. ...+...|.+ .|+.+. ...+..-+. .+ ...|.||+..+- .+ .-|...+..+.+.
T Consensus 5 ~~~ILivdd~~~~-~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 5 TARIMLVDDHPIV-REGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTL--PG-----PGGIEATRHIRQW 76 (153)
T ss_dssp CEEEEEECSCHHH-HHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCC--SS-----SCHHHHHHHHHHH
T ss_pred ccEEEEECCcHHH-HHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHHh
Confidence 3567777765542 2334555655 576665 344322221 22 357888887543 21 2244444444433
Q ss_pred -CCCcEEEecccc
Q 016064 316 -MNKPVYVAAESY 327 (396)
Q Consensus 316 -~~vPvyV~aes~ 327 (396)
.++|+++++...
T Consensus 77 ~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 77 DGAARILIFTMHQ 89 (153)
T ss_dssp CTTCCEEEEESCC
T ss_pred CCCCeEEEEECCC
Confidence 579999987653
No 452
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=30.96 E-value=62 Score=28.81 Aligned_cols=98 Identities=19% Similarity=0.192 Sum_probs=55.6
Q ss_pred cCceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhcc------
Q 016064 215 DGCTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTMD------ 282 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m~------ 282 (396)
.|.+||..|-|+-+-. +.+...++| .+|+++..+.......+..+|.+.|-++.++. | ..+..++.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G--~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRG--ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4567888888776544 334445555 46776654333344566778887787776653 3 33444443
Q ss_pred -cCCEEEEcceeEeecCC-------------eeccccHHHHHHHhhh
Q 016064 283 -EVDMVFVGADGVVESGG-------------IINMMGTYQIALVAHS 315 (396)
Q Consensus 283 -~vd~VlvGAd~V~~NG~-------------v~nkiGT~~lAl~Ak~ 315 (396)
++|.|+-.|-. ...+. -+|-.|++.+.-.+..
T Consensus 98 ~~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 143 (274)
T 1ja9_A 98 GGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK 143 (274)
T ss_dssp SCEEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66766654421 11111 1366788877766654
No 453
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=30.96 E-value=45 Score=30.69 Aligned_cols=108 Identities=17% Similarity=0.217 Sum_probs=56.8
Q ss_pred CceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc----c-hHHHHhccc--CCEE
Q 016064 216 GCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI----D-SAVAYTMDE--VDMV 287 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~----D-sav~~~m~~--vd~V 287 (396)
|.+||..|-|+-+-.-|. .+.++| .+|+++..++..........+.. +-.+.++. | .++..++.. +|.|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKG--YEVYGADRRSGEFASWRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECSCCSTTTTHHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEECCCcccccccHhhccc-cCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 567888888887655443 344445 57777765443211111122211 12344331 2 345555654 5777
Q ss_pred EEcceeEeec---CC-----eeccccHHHHHHHhhhCCC-cEEEeccc
Q 016064 288 FVGADGVVES---GG-----IINMMGTYQIALVAHSMNK-PVYVAAES 326 (396)
Q Consensus 288 lvGAd~V~~N---G~-----v~nkiGT~~lAl~Ak~~~v-PvyV~aes 326 (396)
|--|-....+ .. -+|-.||..+.-+|+.+++ .-+|...+
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 7655322110 00 1467899999999988875 44444433
No 454
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=30.87 E-value=1.6e+02 Score=21.72 Aligned_cols=76 Identities=13% Similarity=0.196 Sum_probs=42.0
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCCC
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMNK 318 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~v 318 (396)
+|+++|..|.. ...+...|.+.|+.|....+..-+. .+ .+.|.|++..+- .+ .-|...+..+-+ ..++
T Consensus 3 ~ilivdd~~~~-~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~~dlvl~D~~l--~~-----~~g~~~~~~l~~~~~~~ 74 (116)
T 3a10_A 3 RILVVDDEPNI-RELLKEELQEEGYEIDTAENGEEALKKFFSGNYDLVILDIEM--PG-----ISGLEVAGEIRKKKKDA 74 (116)
T ss_dssp EEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEECSCC--SS-----SCHHHHHHHHHHHCTTC
T ss_pred EEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHhcCCCCEEEEECCC--CC-----CCHHHHHHHHHccCCCC
Confidence 56666665543 3344566667777776555432222 11 357888887542 21 224433444433 3578
Q ss_pred cEEEeccc
Q 016064 319 PVYVAAES 326 (396)
Q Consensus 319 PvyV~aes 326 (396)
|+++++..
T Consensus 75 ~ii~~s~~ 82 (116)
T 3a10_A 75 KIILLTAY 82 (116)
T ss_dssp CEEEEESC
T ss_pred eEEEEECC
Confidence 99988754
No 455
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=30.75 E-value=91 Score=33.34 Aligned_cols=48 Identities=21% Similarity=0.222 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHCCCeeEEEEeCCCCCc-h--hHHHHHHHHhCCCCEEEEc
Q 016064 225 SRVVMEVLKMAAQNKKLFRVLCTEGRPDR-S--GLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 225 S~~V~~~L~~A~~~gk~f~ViV~EsrP~~-e--G~~la~~L~~~GI~vtlI~ 273 (396)
++.+...|..|+++|+.++|++ |..+.+ + ....++.|.++|++|.+..
T Consensus 378 d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~~~n~~~~~~L~~aGV~V~~~~ 428 (687)
T 1xdp_A 378 DSRIIDSMIHAAHNGKKVTVVV-ELQARFDEEANIHWAKRLTEAGVHVIFSA 428 (687)
T ss_dssp TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTTTTTTTTTHHHHHHTCEEEECC
T ss_pred cHHHHHHHHHHHhcCCEEEEEE-CCCcccchhhHHHHHHHHHHCCCEEEEec
Confidence 3456677777777787777665 333321 1 3455777888887776643
No 456
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=30.74 E-value=1.3e+02 Score=27.62 Aligned_cols=94 Identities=7% Similarity=0.061 Sum_probs=50.0
Q ss_pred ceEEeecChHHHHHHHHHH---HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch--------HHHHhcccCC
Q 016064 217 CTILVHGFSRVVMEVLKMA---AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS--------AVAYTMDEVD 285 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A---~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds--------av~~~m~~vd 285 (396)
.+++|.|.+..+..++..+ .+.| -+|++. .|.+.+...+ +...|+++..++.. .+-..+.+-.
T Consensus 49 ~v~~~~ggt~al~~~~~~~~~~~~~g--d~Vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~ 122 (375)
T 2fnu_A 49 HALVFNSATSALLTLYRNFSEFSADR--NEIITT--PISFVATANM--LLESGYTPVFAGIKNDGNIDELALEKLINERT 122 (375)
T ss_dssp EEEEESCHHHHHHHHHHHSSCCCTTS--CEEEEC--SSSCTHHHHH--HHHTTCEEEECCBCTTSSBCGGGSGGGCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcccCCCC--CEEEEC--CCccHhHHHH--HHHCCCEEEEeccCCCCCCCHHHHHhhcCcCc
Confidence 5677666666666666554 2323 356654 3555555443 33478888776521 1112222212
Q ss_pred EEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 286 MVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 286 ~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
++++-... .|.+.. -..++-+|+++++++++
T Consensus 123 ~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~ 153 (375)
T 2fnu_A 123 KAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLS 153 (375)
T ss_dssp EEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEE
T ss_pred eEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEE
Confidence 33332222 344432 25778889999998877
No 457
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=30.73 E-value=2.2e+02 Score=26.01 Aligned_cols=52 Identities=23% Similarity=0.286 Sum_probs=33.5
Q ss_pred cccCceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEE
Q 016064 213 IFDGCTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKL 271 (396)
Q Consensus 213 I~dg~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtl 271 (396)
++.|++||.+|-|+.+-. .+..|+..|- +|+++++.+.. .++++ +.|....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~--~~~~~---~~ga~~~~ 175 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEK--LALPL---ALGAEEAA 175 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGG--SHHHH---HTTCSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHH---hcCCCEEE
Confidence 788999999998665543 4445555563 78888876543 23343 45766544
No 458
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=30.62 E-value=59 Score=28.56 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=43.7
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEcceeEeecCCeecc-------ccHHHHHH
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINM-------MGTYQIAL 311 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~V~~NG~v~nk-------iGT~~lAl 311 (396)
+++.+|.|++- +.+ =..+.+.|.+.|+++.++.+.. -+.++|.++++ |+--.. .+...+-.
T Consensus 18 ~~~~~I~ii~~-~~~-~~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~-------GG~~~~~~~~~~~~~~~~~i~ 85 (208)
T 2iss_D 18 GSHMKIGVLGV-QGD-VREHVEALHKLGVETLIVKLPE---QLDMVDGLILP-------GGESTTMIRILKEMDMDEKLV 85 (208)
T ss_dssp --CCEEEEECS-SSC-HHHHHHHHHHTTCEEEEECSGG---GGGGCSEEEEC-------SSCHHHHHHHHHHTTCHHHHH
T ss_pred CCCcEEEEEEC-CCc-hHHHHHHHHHCCCEEEEeCChH---HHhhCCEEEEC-------CCcHHHHHhhhhhhhHHHHHH
Confidence 34567777764 332 2345778888999998887643 24677877763 331111 11222222
Q ss_pred HhhhCCCcEEEecccc
Q 016064 312 VAHSMNKPVYVAAESY 327 (396)
Q Consensus 312 ~Ak~~~vPvyV~aes~ 327 (396)
-+.+.++|++-+|--+
T Consensus 86 ~~~~~g~PilGIC~G~ 101 (208)
T 2iss_D 86 ERINNGLPVFATCAGV 101 (208)
T ss_dssp HHHHTTCCEEEETHHH
T ss_pred HHHHCCCeEEEECHHH
Confidence 2335789999877443
No 459
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=30.60 E-value=2.6e+02 Score=24.74 Aligned_cols=108 Identities=20% Similarity=0.169 Sum_probs=60.2
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-cc----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-ID----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-..+ +...++| .+|+++..++ .....++.+|.+.|-.+..+ .| ..+..++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLG--ASVYTCSRNQ-KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 466777777776654433 4444545 4677665432 33455677787777666554 23 2333333
Q ss_pred -ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHh----hhCCCcEEEeccc
Q 016064 282 -DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVA----HSMNKPVYVAAES 326 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~A----k~~~vPvyV~aes 326 (396)
+++|.+|--|-. ...+.+ +|-.|++.++-++ +..+..-+|...+
T Consensus 85 ~g~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS 146 (260)
T 2ae2_A 85 HGKLNILVNNAGI-VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISS 146 (260)
T ss_dssp TTCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECC
T ss_pred CCCCCEEEECCCC-CCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 568887776532 222221 4667888877666 3345555554433
No 460
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=30.50 E-value=1.5e+02 Score=24.79 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCCEEEEcchHHHH----hcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 257 RLANELAKLDVPVKLLIDSAVAY----TMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 257 ~la~~L~~~GI~vtlI~Dsav~~----~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.++..|...|+++..+.|..... .+.+=|.||+-. ..|. ..-+..++-.||..|+|+++++..
T Consensus 66 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS----~sG~---t~~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 66 KMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAIS----NSGE---SSEITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp HHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEEC----SSSC---CHHHHHHHHHHHTTTCCEEEEESC
T ss_pred HHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEe----CCCC---CHHHHHHHHHHHHCCCCEEEEECC
Confidence 45566666777777776654332 235556665432 2342 344677888899999999998854
No 461
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=30.50 E-value=62 Score=30.75 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=58.5
Q ss_pred CceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcc
Q 016064 216 GCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGA 291 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGA 291 (396)
+.+||..|-++-+-.-| +.+.++| .+|+++..++... ..+...++.+... .| .++..++.++|.||--|
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC--CeEEEEECCCccc-----hhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 46888889888765544 3444555 5677665433211 0112234433221 12 34566678888887655
Q ss_pred eeEeec----CC-----eeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 292 DGVVES----GG-----IINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 292 d~V~~N----G~-----v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
-..... .. -+|-.||..+.-+|+..+++-+|...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 322110 00 146678999999999988865555444
No 462
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=30.50 E-value=1.6e+02 Score=26.71 Aligned_cols=76 Identities=21% Similarity=0.154 Sum_probs=48.1
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.++|..|-|+-+-..+ +...++| .+|+++..+.......++.+|.+.|.++..+. | .++..++
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASG--FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC--CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 366777777776654433 3444445 47887776555556677888888888877653 2 2333333
Q ss_pred ccCCEEEEcce
Q 016064 282 DEVDMVFVGAD 292 (396)
Q Consensus 282 ~~vd~VlvGAd 292 (396)
+++|.+|-.|-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 47888887663
No 463
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=30.44 E-value=1.2e+02 Score=23.89 Aligned_cols=79 Identities=13% Similarity=0.026 Sum_probs=39.7
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhC-CC-CEEEEcchHH--HHhc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKL-DV-PVKLLIDSAV--AYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH 314 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~-GI-~vtlI~Dsav--~~~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak 314 (396)
.++|+++|..|.. ...+...|.+. |. .|....+..- ..+- ...|.||+..+- .+ .-|-..+..+-+
T Consensus 3 ~~~iLivdd~~~~-~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~ 74 (154)
T 2qsj_A 3 LTVVLIVDDHHLI-RAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNL--PD-----AEAIDGLVRLKR 74 (154)
T ss_dssp CEEEEEECSCHHH-HHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC-------------CHHHHHHHHH
T ss_pred ccEEEEEcCCHHH-HHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCC--CC-----CchHHHHHHHHH
Confidence 3577777776542 34456666666 76 4444544322 2222 357888887653 21 224444444433
Q ss_pred h-CCCcEEEecccc
Q 016064 315 S-MNKPVYVAAESY 327 (396)
Q Consensus 315 ~-~~vPvyV~aes~ 327 (396)
. .++|+++++...
T Consensus 75 ~~~~~~ii~ls~~~ 88 (154)
T 2qsj_A 75 FDPSNAVALISGET 88 (154)
T ss_dssp HCTTSEEEEC----
T ss_pred hCCCCeEEEEeCCC
Confidence 3 579999987653
No 464
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=30.32 E-value=99 Score=31.18 Aligned_cols=89 Identities=13% Similarity=0.197 Sum_probs=50.0
Q ss_pred cCceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcccCCEEEEccee
Q 016064 215 DGCTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADG 293 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~vd~VlvGAd~ 293 (396)
+...|+.+|-.++=.. +-+-+++.| ++|.+.|.++. ....+|.+.||++.+-.+.. .+..+|.|+++. +
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Sp-g 90 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPN----SVTQHLTALGAQIYFHHRPE---NVLDASVVVVST-A 90 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCC----HHHHHHHHTTCEEESSCCGG---GGTTCSEEEECT-T
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCC----HHHHHHHHCCCEEECCCCHH---HcCCCCEEEECC-C
Confidence 3456777665433221 112223334 68888888754 34567899999887644432 246688887764 1
Q ss_pred EeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 294 VVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 294 V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
|-. +.+.-..|++.++||+-
T Consensus 91 i~~---------~~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 91 ISA---------DNPEIVAAREARIPVIR 110 (494)
T ss_dssp SCT---------TCHHHHHHHHTTCCEEE
T ss_pred CCC---------CCHHHHHHHHCCCCEEc
Confidence 211 23444556667777653
No 465
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=29.95 E-value=2.9e+02 Score=28.54 Aligned_cols=109 Identities=16% Similarity=0.135 Sum_probs=59.0
Q ss_pred CceEEeecChHHHHHHHH-HHHHCCCeeEEEEeCCCCCchhHHH--HHHHHhCCCCEEEE--cc-hHHHHhcc--cCCEE
Q 016064 216 GCTILVHGFSRVVMEVLK-MAAQNKKLFRVLCTEGRPDRSGLRL--ANELAKLDVPVKLL--ID-SAVAYTMD--EVDMV 287 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~-~A~~~gk~f~ViV~EsrP~~eG~~l--a~~L~~~GI~vtlI--~D-sav~~~m~--~vd~V 287 (396)
+.+||..|-|+-+-..|. .+.++| .+|+++..++......+ ...+...++.+... .| .++..++. ++|.|
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG--YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc--CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 578888888877655443 344445 57776654443211111 22333456654332 22 34555666 56766
Q ss_pred EEcceeEeecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 288 FVGADGVVESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 288 lvGAd~V~~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
|--|-...... --+|-.||..++-+|++.+++-+|...+
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS 135 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 65442211000 0135578999988888888765555444
No 466
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=29.89 E-value=4.1e+02 Score=26.16 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=54.0
Q ss_pred cCceEEeecChHHHHHHHHHHH-------H-CCC----eeEEEEeCCCCCchhHHHHHHHHhCCC---CEEEEcc-----
Q 016064 215 DGCTILVHGFSRVVMEVLKMAA-------Q-NKK----LFRVLCTEGRPDRSGLRLANELAKLDV---PVKLLID----- 274 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~-------~-~gk----~f~ViV~EsrP~~eG~~la~~L~~~GI---~vtlI~D----- 274 (396)
.+..++|-|.|..+...|..+. + .|. +.+|++.+.. .-... +.+...|+ ++..++-
T Consensus 165 ~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~--h~s~~--~~~~~~g~g~~~v~~v~~~~~~~ 240 (515)
T 2jis_A 165 SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKEC--HYSIQ--KGAAFLGLGTDSVRVVKADERGK 240 (515)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTS--CTHHH--HHHHHTTSCGGGEEEECBCTTSC
T ss_pred CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCc--cHHHH--HHHHHcCCCCCcEEEEecCCCCc
Confidence 4567888887777666666553 1 242 4577777642 11222 22233355 7777762
Q ss_pred ---hHHHHhccc------CCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 275 ---SAVAYTMDE------VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 275 ---sav~~~m~~------vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
.++-..+.+ ..++|+....-...|.+ .. -..++-+|++++++++|
T Consensus 241 ~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i-~~--l~~I~~la~~~g~~l~v 294 (515)
T 2jis_A 241 MVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF-DP--LEAIADVCQRHGLWLHV 294 (515)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB-CC--HHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc-cC--HHHHHHHHHHcCCeEEE
Confidence 233333432 13333332221223433 33 24788889999999988
No 467
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=29.74 E-value=1.8e+02 Score=22.42 Aligned_cols=80 Identities=13% Similarity=0.058 Sum_probs=47.2
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHh-CCCCEEEEcchHHHHh-c---ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAK-LDVPVKLLIDSAVAYT-M---DEVDMVFVGADGVVESGGIINMMGTYQIALVAH- 314 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~-~GI~vtlI~Dsav~~~-m---~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak- 314 (396)
..+|+|+|..|.. ...+...|.+ .|+.|....+..-+.- + ...|.||+..+- . | ..-|.-.+..+-+
T Consensus 4 ~~~ilivdd~~~~-~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l--~-~---~~~g~~~~~~l~~~ 76 (140)
T 3lua_A 4 DGTVLLIDYFEYE-REKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIMDIAF--P-V---EKEGLEVLSAIRNN 76 (140)
T ss_dssp CCEEEEECSCHHH-HHHHHHHHHHHCCCEEEEECSHHHHHTTTTTCCCCSEEEECSCS--S-S---HHHHHHHHHHHHHS
T ss_pred CCeEEEEeCCHHH-HHHHHHHHHhccCccEEEECCHHHHHHHHhcCCCCcEEEEeCCC--C-C---CCcHHHHHHHHHhC
Confidence 4678888876653 3345666777 7888886666443332 2 347888876432 1 0 1234444444433
Q ss_pred --hCCCcEEEecccc
Q 016064 315 --SMNKPVYVAAESY 327 (396)
Q Consensus 315 --~~~vPvyV~aes~ 327 (396)
..++|+++++...
T Consensus 77 ~~~~~~~ii~ls~~~ 91 (140)
T 3lua_A 77 SRTANTPVIIATKSD 91 (140)
T ss_dssp GGGTTCCEEEEESCC
T ss_pred cccCCCCEEEEeCCC
Confidence 4789999988653
No 468
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=29.60 E-value=51 Score=29.26 Aligned_cols=97 Identities=11% Similarity=0.004 Sum_probs=52.5
Q ss_pred eEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhccc--CCEEEEcceeEe
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVV 295 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~~--vd~VlvGAd~V~ 295 (396)
+||..|-|+-+-..|.+...+| .+|+++..++..+ .|+.+-+.....+..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~g--~~V~~~~r~~~~~----------~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSER--HEVIKVYNSSEIQ----------GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT--SCEEEEESSSCCT----------TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHhcC--CeEEEecCCCcCC----------CCceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 4777787777666555544444 6777665544321 1211111111345555554 776665442211
Q ss_pred ecC--------CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 296 ESG--------GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 296 ~NG--------~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.+. --+|-.|+..+.-+|+..++.|+.++..
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~ 108 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD 108 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecc
Confidence 000 0135678999999998888876655543
No 469
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=29.56 E-value=1.7e+02 Score=24.72 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=45.0
Q ss_pred eEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHh-c--ccCCEEEEcceeEeecCCeeccccHHHHHHHhh-hCC
Q 016064 242 FRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYT-M--DEVDMVFVGADGVVESGGIINMMGTYQIALVAH-SMN 317 (396)
Q Consensus 242 f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~-m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak-~~~ 317 (396)
.+|+++|..|.. ...+...|.+.|..|....+..-+.- + ...|.||+..+- .+ .-|--.+..+-+ ..+
T Consensus 3 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvllD~~l--~~-----~~g~~~~~~lr~~~~~ 74 (225)
T 1kgs_A 3 VRVLVVEDERDL-ADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIML--PV-----HDGWEILKSMRESGVN 74 (225)
T ss_dssp CEEEEECSSHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCC--SS-----SCHHHHHHHHHHTTCC
T ss_pred ceEEEEeCCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHhcCCC
Confidence 467777776643 33445667777888776655433322 2 457888886532 22 224433443333 357
Q ss_pred CcEEEecccc
Q 016064 318 KPVYVAAESY 327 (396)
Q Consensus 318 vPvyV~aes~ 327 (396)
+|+++++...
T Consensus 75 ~~ii~ls~~~ 84 (225)
T 1kgs_A 75 TPVLMLTALS 84 (225)
T ss_dssp CCEEEEESSC
T ss_pred CCEEEEeCCC
Confidence 9999988654
No 470
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=29.54 E-value=31 Score=28.89 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=15.9
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEc
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLI 273 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~ 273 (396)
.|.|+=.-| -|..+|..|++.|++|+++-
T Consensus 4 dV~IIGaGp--aGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 4 PIAIIGTGI--AGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CEEEECCSH--HHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCH--HHHHHHHHHHHCCCCEEEEE
Confidence 344554433 35555666666666666653
No 471
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=29.52 E-value=77 Score=30.35 Aligned_cols=93 Identities=6% Similarity=-0.042 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhc----ccc-CceEEeecChHHHHHHHHHHHHC---CCeeEEEEeCC----CCCchhHHHHHHHHhC-CC
Q 016064 201 ARKIIAMLSQDF----IFD-GCTILVHGFSRVVMEVLKMAAQN---KKLFRVLCTEG----RPDRSGLRLANELAKL-DV 267 (396)
Q Consensus 201 a~~~Ia~~a~~~----I~d-g~~ILT~~~S~~V~~~L~~A~~~---gk~f~ViV~Es----rP~~eG~~la~~L~~~-GI 267 (396)
..+.|+..|+++ |++ |++ +-.+.++|+..+....... .+..+|+-+.+ .|......++..|.+. |+
T Consensus 123 ~k~~ia~~AA~~l~~~i~~~~~~-igl~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~~~~ 201 (345)
T 2o0m_A 123 VLSDFGDVLTNTLNLLLPNGENT-IAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVMANKTGG 201 (345)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEE-EEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCcCCCE-EEECCcHHHHHHHHHhhhccCCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHHhCC
Confidence 345677777764 788 655 4568888888877665432 24566664432 2233455678888776 77
Q ss_pred CEEE--Ecch---HH-HHhc------------ccCCEEEEcceeE
Q 016064 268 PVKL--LIDS---AV-AYTM------------DEVDMVFVGADGV 294 (396)
Q Consensus 268 ~vtl--I~Ds---av-~~~m------------~~vd~VlvGAd~V 294 (396)
++.. +|+. .. -.++ .++|+.|+|.-..
T Consensus 202 ~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~ 246 (345)
T 2o0m_A 202 NYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRA 246 (345)
T ss_dssp EECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEH
T ss_pred ceEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCc
Confidence 6664 3221 11 1112 4799999998643
No 472
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=29.47 E-value=68 Score=29.62 Aligned_cols=109 Identities=14% Similarity=0.046 Sum_probs=58.0
Q ss_pred ceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE--cc-hHHHHhcccCCEEEEcce
Q 016064 217 CTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL--ID-SAVAYTMDEVDMVFVGAD 292 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI--~D-sav~~~m~~vd~VlvGAd 292 (396)
.+||..|-|+-+-.-| +.+.++|...+|+++...+..........+...++.+... .| .++..++..+|.||--|-
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 4788888877665544 3344444346788775443211111112222223322211 12 355667788887776553
Q ss_pred eEeec-----C---CeeccccHHHHHHHhhhCCCcEEEecc
Q 016064 293 GVVES-----G---GIINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 293 ~V~~N-----G---~v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
....+ - --+|-.||..++-+|+.+++.|+.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS 125 (348)
T 1oc2_A 85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 125 (348)
T ss_dssp CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecc
Confidence 22100 0 014678999999999988885555443
No 473
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=29.41 E-value=1.7e+02 Score=27.14 Aligned_cols=94 Identities=10% Similarity=0.021 Sum_probs=51.5
Q ss_pred CceEEeecChHHHHHHHHHH-HHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhcc-cC
Q 016064 216 GCTILVHGFSRVVMEVLKMA-AQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTMD-EV 284 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A-~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m~-~v 284 (396)
..+++|-|.+..+..++..+ .+.| -+|++. .|.+.+.. ..+...|+++..++. ..+-..+. ++
T Consensus 55 ~~~~~~~~gt~al~~~~~~~~~~~g--d~Vl~~--~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~ 128 (393)
T 1mdo_A 55 QYAVAVSSATAGMHIALMALGIGEG--DEVITP--SMTWVSTL--NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQT 128 (393)
T ss_dssp SEEEEESCHHHHHHHHHHHTTCCTT--CEEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTE
T ss_pred CcEEEecChHHHHHHHHHHcCCCCC--CEEEeC--CCccHhHH--HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCc
Confidence 35677766555555555444 2333 356654 34555543 344567888877752 22333343 33
Q ss_pred CEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEE
Q 016064 285 DMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYV 322 (396)
Q Consensus 285 d~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV 322 (396)
..|++ .. ..|.+. .-..++-+|+++++++++
T Consensus 129 ~~v~~-~~---~~G~~~---~~~~i~~l~~~~~~~li~ 159 (393)
T 1mdo_A 129 KAIIP-VH---YAGAPA---DLDAIYALGERYGIPVIE 159 (393)
T ss_dssp EEECC-BC---GGGCCC---CHHHHHHHHHHHTCCBCE
T ss_pred eEEEE-eC---CCCCcC---CHHHHHHHHHHcCCeEEE
Confidence 33433 22 344432 346778888999998876
No 474
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=29.27 E-value=1.2e+02 Score=27.16 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=56.0
Q ss_pred eEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcchHHHHhcc-----cCCEEEEcc
Q 016064 218 TILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDSAVAYTMD-----EVDMVFVGA 291 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Dsav~~~m~-----~vd~VlvGA 291 (396)
+||..|.|+-+-.-|.+ +.++| ..+|+++...+.... ...+....+.+-+-....+..++. ++|.||--|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG 76 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGG---GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCCCCch---hhhcCcceeccccccHHHHHHHHhccccCCCcEEEECc
Confidence 36777877766554444 44444 246666654433211 112222224455444455666665 488877655
Q ss_pred eeEeec-CC-----eeccccHHHHHHHhhhCCCcEEEecc
Q 016064 292 DGVVES-GG-----IINMMGTYQIALVAHSMNKPVYVAAE 325 (396)
Q Consensus 292 d~V~~N-G~-----v~nkiGT~~lAl~Ak~~~vPvyV~ae 325 (396)
-..... .. -+|-.||..++-+|+..++.|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 116 (310)
T 1eq2_A 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116 (310)
T ss_dssp SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 322110 00 13667899999999888885555443
No 475
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=29.26 E-value=28 Score=33.13 Aligned_cols=68 Identities=16% Similarity=0.116 Sum_probs=42.3
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---h--HHHHhcccCCEEEEcc
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---S--AVAYTMDEVDMVFVGA 291 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---s--av~~~m~~vd~VlvGA 291 (396)
.+|+..|.+..-..+...|++.| ++|++++..|..-+.++|. -.++.| . ++-.+.+++|.|+.|.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G--~~vv~vd~~~~~~~~~~aD--------~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 71 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAG--MKVVLVDKNPQALIRNYAD--------EFYCFDVIKEPEKLLELSKRVDAVLPVN 71 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTTTTSS--------EEEECCTTTCHHHHHHHHTSSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCCCChhHhhCC--------EEEECCCCcCHHHHHHHhcCCCEEEECC
Confidence 47888888776666777777666 6788888888754444321 122211 1 2223347899999887
Q ss_pred eeE
Q 016064 292 DGV 294 (396)
Q Consensus 292 d~V 294 (396)
+.+
T Consensus 72 ~~~ 74 (363)
T 4ffl_A 72 ENL 74 (363)
T ss_dssp CCH
T ss_pred CCh
Confidence 643
No 476
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=29.23 E-value=2.2e+02 Score=26.80 Aligned_cols=100 Identities=8% Similarity=-0.005 Sum_probs=54.6
Q ss_pred ceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhcc-----
Q 016064 217 CTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTMD----- 282 (396)
Q Consensus 217 ~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m~----- 282 (396)
.+++|-|.+..+..++....+.|. +|++.+ |.+.+... .+...|.++..++- ..+-..+.
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~gd--~Vl~~~--p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEGD--PLICHD--YYWAPYRK--ICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSC--EEEEES--SCCTHHHH--HHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEEcCccHHHHHHHHHHhcCCCC--EEEECC--CCcccHHH--HHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhc
Confidence 577777777766666655543343 566554 56655443 23445777777652 12333333
Q ss_pred cCCEEEEccee-EeecCCeeccccHHHHHHHhh------hCCCcEEE
Q 016064 283 EVDMVFVGADG-VVESGGIINMMGTYQIALVAH------SMNKPVYV 322 (396)
Q Consensus 283 ~vd~VlvGAd~-V~~NG~v~nkiGT~~lAl~Ak------~~~vPvyV 322 (396)
+..++++=..- --..|.+...---..++-+|+ ++++.+++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 34423332211 134566666665566777777 77776665
No 477
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=29.21 E-value=52 Score=32.88 Aligned_cols=108 Identities=15% Similarity=0.145 Sum_probs=57.2
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCCCCCch--hHHHHHHHHh-----------CCCCEEEE--cc-hHHH
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRS--GLRLANELAK-----------LDVPVKLL--ID-SAVA 278 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~EsrP~~e--G~~la~~L~~-----------~GI~vtlI--~D-sav~ 278 (396)
+..+||..|-++.+-..|.+.. ..+..+|+++.-++... -.++...|.. .++.+... .| ..+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L-~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEAL-QGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHT-BTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCeEEEECCccchHHHHHHHH-HhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 4568999999988777665554 34567888875444321 1233333322 23332221 12 2223
Q ss_pred HhcccCCEEEEcceeEeecC-----CeeccccHHHHHHHhhhCCCcEEEec
Q 016064 279 YTMDEVDMVFVGADGVVESG-----GIINMMGTYQIALVAHSMNKPVYVAA 324 (396)
Q Consensus 279 ~~m~~vd~VlvGAd~V~~NG-----~v~nkiGT~~lAl~Ak~~~vPvyV~a 324 (396)
.+.++|.||--|-.+-.++ --.|-.||..++-+|+..+++|+.+.
T Consensus 228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iS 277 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVS 277 (508)
T ss_dssp -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeC
Confidence 3455565554332221100 01377899999999988555555443
No 478
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=29.03 E-value=3.4e+02 Score=25.17 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=54.6
Q ss_pred CceEEeecChHHHHHHHHHHHHC-----CCeeEEEEeCCCCCchhHHH-HHH----------HHhCCCCEEEEc--c-hH
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN-----KKLFRVLCTEGRPDRSGLRL-ANE----------LAKLDVPVKLLI--D-SA 276 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~-----gk~f~ViV~EsrP~~eG~~l-a~~----------L~~~GI~vtlI~--D-sa 276 (396)
..+++|-|.+..+...|+.+... ..+-+|++.+. .+.|..+ +.. +...+.++..++ | .+
T Consensus 94 ~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T 3nx3_A 94 ERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKH--SFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISS 171 (395)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETT--CCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcC--CcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHH
Confidence 46777777777777777665432 12236666542 2222221 111 122345666665 3 23
Q ss_pred HHHhcccCCEEEEcceeEeecCCeec-ccc-HHHHHHHhhhCCCcEEE
Q 016064 277 VAYTMDEVDMVFVGADGVVESGGIIN-MMG-TYQIALVAHSMNKPVYV 322 (396)
Q Consensus 277 v~~~m~~vd~VlvGAd~V~~NG~v~n-kiG-T~~lAl~Ak~~~vPvyV 322 (396)
+-..+..-.++ +=.+.+..+|+.+. .-+ --.++-+|++|++++++
T Consensus 172 l~~~l~~~~~~-v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 218 (395)
T 3nx3_A 172 VEKLVNEKTCA-IILESVQGEGGINPANKDFYKALRKLCDEKDILLIA 218 (395)
T ss_dssp HHTTCCTTEEE-EEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhccCCeEE-EEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 33344322222 22355676665553 333 34577789999998876
No 479
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=29.00 E-value=68 Score=30.86 Aligned_cols=104 Identities=12% Similarity=0.016 Sum_probs=51.9
Q ss_pred CceEEeecChHHHHHHHHHHHHC-CCeeEEEEeCCCCCchhHHH-HHHHHhCCC------------CEEEEc--------
Q 016064 216 GCTILVHGFSRVVMEVLKMAAQN-KKLFRVLCTEGRPDRSGLRL-ANELAKLDV------------PVKLLI-------- 273 (396)
Q Consensus 216 g~~ILT~~~S~~V~~~L~~A~~~-gk~f~ViV~EsrP~~eG~~l-a~~L~~~GI------------~vtlI~-------- 273 (396)
..+++|.|.+..+...|+.+..- ++ -+|++.+. .+.|... +..+..... .+..++
T Consensus 105 ~~v~~~~ggsea~~~al~~~~~~~~~-~~vi~~~~--~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (439)
T 3dxv_A 105 HKIWFGHSGSDANEAAYRAIVKATGR-SGVIAFAG--AYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDP 181 (439)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSC-CEEEEETT--CCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBT
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhCC-CEEEEECC--CCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccc
Confidence 36778877788888888776331 33 35666543 2223222 222221111 012222
Q ss_pred ----c-hHHHHhcc---cCCEEEEcceeEeecCCeec-ccc-HHHHHHHhhhCCCcEEE
Q 016064 274 ----D-SAVAYTMD---EVDMVFVGADGVVESGGIIN-MMG-TYQIALVAHSMNKPVYV 322 (396)
Q Consensus 274 ----D-sav~~~m~---~vd~VlvGAd~V~~NG~v~n-kiG-T~~lAl~Ak~~~vPvyV 322 (396)
| .++-..+. .-+..++=.+.+..+|+.+. .-+ =-.++-+|++|++++++
T Consensus 182 ~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 240 (439)
T 3dxv_A 182 TGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 240 (439)
T ss_dssp TSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 33444441 11222333345666655543 444 45678889999998776
No 480
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=28.97 E-value=3.5e+02 Score=25.08 Aligned_cols=71 Identities=8% Similarity=0.160 Sum_probs=39.7
Q ss_pred EEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch---HHHHhcc-----cCCEEEEcceeEe-ecCCeeccccHHHHHHHh
Q 016064 243 RVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS---AVAYTMD-----EVDMVFVGADGVV-ESGGIINMMGTYQIALVA 313 (396)
Q Consensus 243 ~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds---av~~~m~-----~vd~VlvGAd~V~-~NG~v~nkiGT~~lAl~A 313 (396)
+|++.+ |.+.+... .+...|.++..++.. .+-..+. ++..|++ ..+. ..|.+.. --.++-+|
T Consensus 134 ~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~--~~~~nptG~~~~---l~~i~~l~ 204 (401)
T 2bwn_A 134 IIYSDS--LNHASMIE--GIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAF--ESVYSMDGDFGP---IKEICDIA 204 (401)
T ss_dssp EEEEET--TCCHHHHH--HHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEE--ESBCTTTCCBCC---HHHHHHHH
T ss_pred EEEECc--hhhHHHHH--HHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEE--ecCcCCCCCcCC---HHHHHHHH
Confidence 555544 55544433 344579998888632 3334443 3333433 2232 2344443 35788889
Q ss_pred hhCCCcEEE
Q 016064 314 HSMNKPVYV 322 (396)
Q Consensus 314 k~~~vPvyV 322 (396)
+++++++++
T Consensus 205 ~~~~~~li~ 213 (401)
T 2bwn_A 205 EEFGALTYI 213 (401)
T ss_dssp HHHTCEEEE
T ss_pred HHcCCEEEE
Confidence 999988776
No 481
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=28.91 E-value=2e+02 Score=22.55 Aligned_cols=80 Identities=14% Similarity=0.228 Sum_probs=47.5
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCC--CEEEEcchHHHH-hc-----------ccCCEEEEcceeEeecCCeeccccH
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDV--PVKLLIDSAVAY-TM-----------DEVDMVFVGADGVVESGGIINMMGT 306 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI--~vtlI~Dsav~~-~m-----------~~vd~VlvGAd~V~~NG~v~nkiGT 306 (396)
..+|+++|..|.. ...+...|.+.|. .|....+..-+. .+ ...|.||+..+- .+ .-|-
T Consensus 4 ~~~ILivddd~~~-~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l--~~-----~~g~ 75 (152)
T 3heb_A 4 SVTIVMIEDDLGH-ARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNL--PD-----MTGI 75 (152)
T ss_dssp -CEEEEECCCHHH-HHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBC--SS-----SBHH
T ss_pred CceEEEEeCCHHH-HHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCC--CC-----CcHH
Confidence 4678888876653 3455777888887 677666643322 22 357888886542 22 2344
Q ss_pred HHHHHHhh---hCCCcEEEeccccc
Q 016064 307 YQIALVAH---SMNKPVYVAAESYK 328 (396)
Q Consensus 307 ~~lAl~Ak---~~~vPvyV~aes~K 328 (396)
-.+..+-+ ..++|+++++....
T Consensus 76 ~~~~~lr~~~~~~~~pii~~t~~~~ 100 (152)
T 3heb_A 76 DILKLVKENPHTRRSPVVILTTTDD 100 (152)
T ss_dssp HHHHHHHHSTTTTTSCEEEEESCCC
T ss_pred HHHHHHHhcccccCCCEEEEecCCC
Confidence 44444433 35799999886543
No 482
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=28.90 E-value=1.6e+02 Score=26.45 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=57.9
Q ss_pred cCceEEeecChHHHHH-HHHHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVME-VLKMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~-~L~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-. +.+...++| .+|+++..++......+..++.+.|.++.++. | ..+..++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMG--LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4667777777765544 334444545 46877766555556677888888888887653 2 2233333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHh
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVA 313 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~A 313 (396)
+++|.+|-.|- +...+.+ +|-.|++.++-.+
T Consensus 106 g~id~li~nAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 149 (271)
T 4iin_A 106 GGLSYLVNNAG-VVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREA 149 (271)
T ss_dssp SSCCEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCEEEECCC-cCCCcccccCCHHHHHHHHHhccHHHHHHHHHH
Confidence 47888887663 3333322 3556776666544
No 483
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=28.73 E-value=1.7e+02 Score=24.49 Aligned_cols=79 Identities=19% Similarity=0.087 Sum_probs=46.6
Q ss_pred eeEEEEeCCCCCchhHHHHHHHHhCCCCEE-EEcchHHHH-hc--ccCCEEEEcceeEeecCCeeccccHHHHHHHhhhC
Q 016064 241 LFRVLCTEGRPDRSGLRLANELAKLDVPVK-LLIDSAVAY-TM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSM 316 (396)
Q Consensus 241 ~f~ViV~EsrP~~eG~~la~~L~~~GI~vt-lI~Dsav~~-~m--~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~ 316 (396)
..+|+++|..|.. ...+...|...|+.|. ...+..-+. .+ ...|.||+..+- .+ .-|--.+..+.+..
T Consensus 13 ~~~iLivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~~al~~~~~~~~dlvi~D~~~--p~-----~~g~~~~~~l~~~~ 84 (205)
T 1s8n_A 13 PRRVLIAEDEALI-RMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKM--PR-----RDGIDAASEIASKR 84 (205)
T ss_dssp CCEEEEECSSHHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--SS-----SCHHHHHHHHHHTT
T ss_pred CccEEEEECCHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCEEEEeCCC--CC-----CChHHHHHHHHhcC
Confidence 4578888877653 3344666777888877 444433222 22 458888886432 22 23444444555555
Q ss_pred CCcEEEecccc
Q 016064 317 NKPVYVAAESY 327 (396)
Q Consensus 317 ~vPvyV~aes~ 327 (396)
..|+++++...
T Consensus 85 ~~pii~lt~~~ 95 (205)
T 1s8n_A 85 IAPIVVLTAFS 95 (205)
T ss_dssp CSCEEEEEEGG
T ss_pred CCCEEEEecCC
Confidence 67999987643
No 484
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=28.67 E-value=1.3e+02 Score=28.03 Aligned_cols=20 Identities=10% Similarity=0.051 Sum_probs=15.0
Q ss_pred HHHHHHhhhCCCcEEEeccc
Q 016064 307 YQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 307 ~~lAl~Ak~~~vPvyV~aes 326 (396)
+..+++|+..++|++...-.
T Consensus 125 ~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 125 LIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHHTTCCEEEECCS
T ss_pred hHHHHHHHHhCCCEEEEecC
Confidence 44567889999999887533
No 485
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=28.61 E-value=2.5e+02 Score=25.61 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=50.2
Q ss_pred ceEEeecChH---HHHHHHHHHHHC-CCeeEE-EEeCCCCCchhHHHHHHHHhCCC-CEEEEcc-hHHHHhcccCCEEEE
Q 016064 217 CTILVHGFSR---VVMEVLKMAAQN-KKLFRV-LCTEGRPDRSGLRLANELAKLDV-PVKLLID-SAVAYTMDEVDMVFV 289 (396)
Q Consensus 217 ~~ILT~~~S~---~V~~~L~~A~~~-gk~f~V-iV~EsrP~~eG~~la~~L~~~GI-~vtlI~D-sav~~~m~~vd~Vlv 289 (396)
.+|+.++.+- -....|.+|.+. .+.+++ +++-..+. .++.+.+.+.|+ +|++..- ..+..+|..+|.+++
T Consensus 184 ~~il~~~g~~~~~k~~~~li~a~~~l~~~~~~l~i~G~~~~---~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 184 VRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQ---QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVC 260 (364)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGGGEEEEEECCTTCH---HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEE
T ss_pred cEEEEEcCchHhHHHHHHHHHHHHHhcCCcEEEEEcCCchH---HHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEE
Confidence 4566665322 223344344332 125774 34443342 344455556665 5666542 357788899999887
Q ss_pred cceeEeecCCeeccccHHHHHHHhhhCCCcEEEe
Q 016064 290 GADGVVESGGIINMMGTYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 290 GAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~ 323 (396)
.+ | ....+=|-.+|+||++.
T Consensus 261 ~s------g--------~~~~~EAma~G~Pvi~~ 280 (364)
T 1f0k_A 261 RS------G--------ALTVSEIAAAGLPALFV 280 (364)
T ss_dssp CC------C--------HHHHHHHHHHTCCEEEC
T ss_pred CC------c--------hHHHHHHHHhCCCEEEe
Confidence 64 2 33445566779999885
No 486
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=28.48 E-value=34 Score=36.63 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=40.7
Q ss_pred ccccCceEEeecChH--HHHHHHHHHHHCCCeeEEEEeCCCCCc--hhHHHHHHH---HhCCCCEEEEcchH
Q 016064 212 FIFDGCTILVHGFSR--VVMEVLKMAAQNKKLFRVLCTEGRPDR--SGLRLANEL---AKLDVPVKLLIDSA 276 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~--~V~~~L~~A~~~gk~f~ViV~EsrP~~--eG~~la~~L---~~~GI~vtlI~Dsa 276 (396)
.|+.+|.+|++++.+ .+..+|..|++.-....+.++ |+. .+..++..| ++.|++|+++.|..
T Consensus 334 ~i~~~D~ll~~P~~sf~~v~~~I~~A~~dp~v~~I~it---~Y~~~~d~~I~~AL~~AA~rGV~VrVLvd~~ 402 (687)
T 1xdp_A 334 AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKIN---IYRVAKDSRIIDSMIHAAHNGKKVTVVVELQ 402 (687)
T ss_dssp HHHHSCEEEEETTBCTHHHHHHHHHHHHCTTEEEEEEE---ESSCCTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHhcCCEEEECchhhhhhHHHHHHHHhhCCcceEEEEE---eeeecCcHHHHHHHHHHHhcCCEEEEEECCC
Confidence 456689999998843 578899998764333344442 221 234555555 56799999999853
No 487
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=28.45 E-value=1.8e+02 Score=24.88 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=0.0
Q ss_pred CeeEEEEeCCCCCchhHHHHHHHHhCCC-CEEEEcchHHHHhc---c-------------cCCEEEEcceeEeecCCeec
Q 016064 240 KLFRVLCTEGRPDRSGLRLANELAKLDV-PVKLLIDSAVAYTM---D-------------EVDMVFVGADGVVESGGIIN 302 (396)
Q Consensus 240 k~f~ViV~EsrP~~eG~~la~~L~~~GI-~vtlI~Dsav~~~m---~-------------~vd~VlvGAd~V~~NG~v~n 302 (396)
+..+|+|+|..|.. ...+...|.+.|+ .|....+..-+.-+ . ..|.||+.. .+-.
T Consensus 60 ~~~~ILiVdDd~~~-~~~l~~~L~~~g~~~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~-------~lp~ 131 (206)
T 3mm4_A 60 RGKRVLVVDDNFIS-RKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDC-------QMPE 131 (206)
T ss_dssp TTCEEEEECSCHHH-HHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEES-------CCSS
T ss_pred CCCEEEEEeCCHHH-HHHHHHHHHHcCCCeeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcC-------CCCC
Q ss_pred cccHHHHHHHhhh-----CCCcEEEeccc
Q 016064 303 MMGTYQIALVAHS-----MNKPVYVAAES 326 (396)
Q Consensus 303 kiGT~~lAl~Ak~-----~~vPvyV~aes 326 (396)
.-|--.+..+-+. .++|+++++..
T Consensus 132 ~~G~el~~~lr~~~~~~~~~~piI~ls~~ 160 (206)
T 3mm4_A 132 MDGYEATREIRKVEKSYGVRTPIIAVSGH 160 (206)
T ss_dssp SCHHHHHHHHHHHHHTTTCCCCEEEEESS
T ss_pred CCHHHHHHHHHhhhhhcCCCCcEEEEECC
No 488
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=28.36 E-value=1.4e+02 Score=23.67 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=36.3
Q ss_pred cCceEEeecChHHHHHHHHHHHHCCCeeEEEEeCC-CCCchhHHHHHHHHhC--CCCEEEEcc
Q 016064 215 DGCTILVHGFSRVVMEVLKMAAQNKKLFRVLCTEG-RPDRSGLRLANELAKL--DVPVKLLID 274 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~A~~~gk~f~ViV~Es-rP~~eG~~la~~L~~~--GI~vtlI~D 274 (396)
.|..|.+.+....+...+. + ...|.+++++- -|...|..+++.|++. ++++.+++.
T Consensus 26 ~~~~v~~~~~~~~a~~~l~---~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 84 (151)
T 3kcn_A 26 FDFEVTTCESGPEALACIK---K-SDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTG 84 (151)
T ss_dssp TTSEEEEESSHHHHHHHHH---H-SCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEEC
T ss_pred cCceEEEeCCHHHHHHHHH---c-CCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEEC
Confidence 4556666666555444442 2 34477887774 4888999999998865 456665554
No 489
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=28.26 E-value=88 Score=28.89 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=57.4
Q ss_pred cCceEEeecChHHHHHHHHH-HHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEE-c---c-hHHHHhcc--cCCE
Q 016064 215 DGCTILVHGFSRVVMEVLKM-AAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLL-I---D-SAVAYTMD--EVDM 286 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L~~-A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI-~---D-sav~~~m~--~vd~ 286 (396)
.|.+||..|-|+-+-..|.+ +.++| .+|+++..++...- .+...| .+ +.++ . | .++..++. ++|.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~l--~~--v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQG--HEILVIDNFATGKR-EVLPPV--AG--LSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGT--CEEEEEECCSSSCG-GGSCSC--TT--EEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCccch-hhhhcc--CC--ceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 46788888988877555544 34445 57776654332111 111111 23 3322 2 2 34556666 7777
Q ss_pred EEEcceeEeecC-----CeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 287 VFVGADGVVESG-----GIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 287 VlvGAd~V~~NG-----~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
||--|-...... --+|-.||..++-+|+..+++-+|...+
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 776553211100 1246789999999998888765555444
No 490
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=28.22 E-value=41 Score=30.92 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=22.8
Q ss_pred hhHHHHHHHHhCCCCEEEEcch---HHHHhcccCCEEEEcceeEe
Q 016064 254 SGLRLANELAKLDVPVKLLIDS---AVAYTMDEVDMVFVGADGVV 295 (396)
Q Consensus 254 eG~~la~~L~~~GI~vtlI~Ds---av~~~m~~vd~VlvGAd~V~ 295 (396)
.|..+++.|.+.|++|..+... ..-.-+.++|.|+.+.+.-+
T Consensus 23 s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~D~v~~~~~~~~ 67 (307)
T 3r5x_A 23 TGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHGKY 67 (307)
T ss_dssp HHHHHHHHSCTTTEEEEEEECSSGGGHHHHTTTCSEEEECCCSHH
T ss_pred HHHHHHHHHHHCCCEEEEEcccCchhHHHhccCCCEEEEeCCCCC
Confidence 3555556666666665554422 11122357888888765533
No 491
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.12 E-value=2.7e+02 Score=24.63 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=61.9
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.+||..|.|+-+-..+ +...++| .+|+++. |.......+..+|.+.|-.+.++. | .++..++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLG--ARVVLTA-RDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEE-CCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 456777778776654443 4444555 4677664 433445677888888887776653 3 2333333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhh----hCCCcEEEeccc
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAH----SMNKPVYVAAES 326 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak----~~~vPvyV~aes 326 (396)
+++|.||-.|-.....|.+ +|-.|++.+.-.+. ..+.+.+|...+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 166 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS 166 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 4688888776432222222 35567777765542 244555554433
No 492
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=28.11 E-value=3e+02 Score=23.95 Aligned_cols=107 Identities=18% Similarity=0.184 Sum_probs=60.3
Q ss_pred cCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc-------
Q 016064 215 DGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------- 281 (396)
Q Consensus 215 dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------- 281 (396)
.|.+||..|-|+-+-..+ +...++| .+|+++..++ .....+.++|.+.|-++.++. | ..+..++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAG--ARVIIADLDE-AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467778778777664433 4444545 5777775433 234456777877777776653 2 2333333
Q ss_pred ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhhh----CCCcEEEec
Q 016064 282 DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAHS----MNKPVYVAA 324 (396)
Q Consensus 282 ~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak~----~~vPvyV~a 324 (396)
+++|.||--|-.....+.+ +|-.|++.++-.+.. .+...+|..
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ 148 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAI 148 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEE
Confidence 3688888766322212211 366788777766543 244555544
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=28.09 E-value=1e+02 Score=30.95 Aligned_cols=110 Identities=21% Similarity=0.279 Sum_probs=65.3
Q ss_pred hhccccCceEEeecChHHHHHHHHHHHHCCC-eeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcch-HHH----Hhccc
Q 016064 210 QDFIFDGCTILVHGFSRVVMEVLKMAAQNKK-LFRVLCTEGRPDRSGLRLANELAKLDVPVKLLIDS-AVA----YTMDE 283 (396)
Q Consensus 210 ~~~I~dg~~ILT~~~S~~V~~~L~~A~~~gk-~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~Ds-av~----~~m~~ 283 (396)
-..|..||.|...+.+..+.+++.......+ .-+|++.-+ +.-|..+|+.|.+ +++|++|-.. .-+ ..+++
T Consensus 203 ~t~i~~gD~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~ 279 (461)
T 4g65_A 203 TTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELEN 279 (461)
T ss_dssp TCBCCTTCEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTT
T ss_pred CceecCCCEEEEEeccchHHHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCC
Confidence 3455678999999999888888876644322 345666654 4568899999854 6888888542 222 22232
Q ss_pred CCEEEEc--ce-------eEeecCCeecccc----HHHHHHHhhhCCCcEEEe
Q 016064 284 VDMVFVG--AD-------GVVESGGIINMMG----TYQIALVAHSMNKPVYVA 323 (396)
Q Consensus 284 vd~VlvG--Ad-------~V~~NG~v~nkiG----T~~lAl~Ak~~~vPvyV~ 323 (396)
+ .|+-| .| .|-.--.+++-.| -..++++||++|+|-.++
T Consensus 280 ~-~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 280 T-IVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp S-EEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred c-eEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2 23222 00 1111112222333 467889999999886654
No 494
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.08 E-value=1.9e+02 Score=27.35 Aligned_cols=67 Identities=13% Similarity=0.223 Sum_probs=37.7
Q ss_pred eEEeecChHHHHHHHHHHHHCCC-eeEEE-EeCCCCCchhHHHHHHHHhCCCCEEEEcc---------hHHHHhcc--cC
Q 016064 218 TILVHGFSRVVMEVLKMAAQNKK-LFRVL-CTEGRPDRSGLRLANELAKLDVPVKLLID---------SAVAYTMD--EV 284 (396)
Q Consensus 218 ~ILT~~~S~~V~~~L~~A~~~gk-~f~Vi-V~EsrP~~eG~~la~~L~~~GI~vtlI~D---------sav~~~m~--~v 284 (396)
.||.-|+.+....+|.. .+.|. ..+|. |+=.+|...+ + -.+.|||+..++. ..+...++ ++
T Consensus 99 ~vl~Sg~g~~l~~ll~~-~~~g~l~~~i~~Visn~~~~~~--~---A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~ 172 (292)
T 3lou_A 99 LIMVSKLEHCLADLLFR-WKMGELKMDIVGIVSNHPDFAP--L---AAQHGLPFRHFPITADTKAQQEAQWLDVFETSGA 172 (292)
T ss_dssp EEEECSCCHHHHHHHHH-HHHTSSCCEEEEEEESSSTTHH--H---HHHTTCCEEECCCCSSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEcCCCcCHHHHHHH-HHcCCCCcEEEEEEeCcHHHHH--H---HHHcCCCEEEeCCCcCCHHHHHHHHHHHHHHhCC
Confidence 45665566666666654 44453 35554 4444565432 2 3467999998762 23444443 57
Q ss_pred CEEEEc
Q 016064 285 DMVFVG 290 (396)
Q Consensus 285 d~VlvG 290 (396)
|.+++.
T Consensus 173 Dlivla 178 (292)
T 3lou_A 173 ELVILA 178 (292)
T ss_dssp SEEEES
T ss_pred CEEEec
Confidence 777764
No 495
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=28.03 E-value=1.1e+02 Score=28.49 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=32.8
Q ss_pred HHHHHHHHHHCCCeeEEEEeCCCCCc--hhHHHHHHHHhCCCCEEEEcc
Q 016064 228 VMEVLKMAAQNKKLFRVLCTEGRPDR--SGLRLANELAKLDVPVKLLID 274 (396)
Q Consensus 228 V~~~L~~A~~~gk~f~ViV~EsrP~~--eG~~la~~L~~~GI~vtlI~D 274 (396)
+...|.+..++|++. |++..+-|.. -|..+++.|.+.||++.+||=
T Consensus 81 i~~~l~~~~~~G~~V-v~L~~GDP~i~g~g~~l~~~l~~~gi~veviPG 128 (280)
T 1s4d_A 81 ISLRLVELARAGNRV-LRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPG 128 (280)
T ss_dssp HHHHHHHHHHTTCCE-EEEESBCTTSSSSHHHHHHHHHTTTCCEEEECC
T ss_pred HHHHHHHHHhCCCeE-EEEcCCCCccccCHHHHHHHHHHCCCCEEEEcC
Confidence 444454545567753 4456799974 467788999999999999984
No 496
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=27.96 E-value=47 Score=29.17 Aligned_cols=34 Identities=6% Similarity=0.056 Sum_probs=21.6
Q ss_pred ccccCceEEeecChHH---HHHHHHHHHHCCCeeEEE
Q 016064 212 FIFDGCTILVHGFSRV---VMEVLKMAAQNKKLFRVL 245 (396)
Q Consensus 212 ~I~dg~~ILT~~~S~~---V~~~L~~A~~~gk~f~Vi 245 (396)
-|+++|+++.+|+|+. +..+.+.|+++|-.+-++
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaI 110 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSII 110 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEE
Confidence 4567888888887773 555666666656544333
No 497
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=27.95 E-value=3e+02 Score=23.88 Aligned_cols=40 Identities=20% Similarity=0.172 Sum_probs=27.4
Q ss_pred hcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 280 TMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 280 ~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.+.+=|.||+- ...|. ..-+..++-.||+.|+|+++++..
T Consensus 111 ~~~~~Dvvi~i----S~SG~---t~~~~~~~~~ak~~g~~vi~iT~~ 150 (201)
T 3trj_A 111 LGNEDDILLVI----TTSGD---SENILSAVEEAHDLEMKVIALTGG 150 (201)
T ss_dssp HCCTTCEEEEE----CSSSC---CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred hCCCCCEEEEE----eCCCC---CHHHHHHHHHHHHCCCcEEEEECC
Confidence 35667777652 33453 334667788899999999998753
No 498
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=27.92 E-value=2.1e+02 Score=27.53 Aligned_cols=69 Identities=23% Similarity=0.246 Sum_probs=38.5
Q ss_pred CCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEcc---hHHHHhcccCCEEEEcceeEeecCCeeccccHHHHHHHhhh
Q 016064 239 KKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLID---SAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHS 315 (396)
Q Consensus 239 gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~D---sav~~~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~ 315 (396)
...+++++.-. |...-++..+++....-+|.++.- ..+..+|..+|+|+..+ | +.+ +=|-.
T Consensus 261 ~~~~~~v~~~g-~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S------G-------g~~--~EA~a 324 (396)
T 3dzc_A 261 HPECQILYPVH-LNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS------G-------GIQ--EEAPS 324 (396)
T ss_dssp CTTEEEEEECC-BCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC------S-------GGG--TTGGG
T ss_pred CCCceEEEEeC-CChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC------c-------cHH--HHHHH
Confidence 34577775422 211123333443222235776431 34668899999987553 3 222 45777
Q ss_pred CCCcEEEe
Q 016064 316 MNKPVYVA 323 (396)
Q Consensus 316 ~~vPvyV~ 323 (396)
+|+|+++.
T Consensus 325 ~G~PvV~~ 332 (396)
T 3dzc_A 325 LGKPVLVM 332 (396)
T ss_dssp GTCCEEEC
T ss_pred cCCCEEEc
Confidence 89999984
No 499
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=27.72 E-value=67 Score=27.74 Aligned_cols=63 Identities=11% Similarity=0.204 Sum_probs=42.4
Q ss_pred HHHHHHHhCCCCEEEEcchHHHH----hcccCCEEEEcceeEeecCCeeccccHHHHHHHhhhCCCcEEEeccc
Q 016064 257 RLANELAKLDVPVKLLIDSAVAY----TMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES 326 (396)
Q Consensus 257 ~la~~L~~~GI~vtlI~Dsav~~----~m~~vd~VlvGAd~V~~NG~v~nkiGT~~lAl~Ak~~~vPvyV~aes 326 (396)
.++..|...|++|..+.+..... .+.+=|.||+- ...|.. .-+..++-.||..|+|+++++..
T Consensus 62 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~i----S~sG~t---~~~~~~~~~ak~~g~~vi~IT~~ 128 (201)
T 3fxa_A 62 KLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILI----SKGGNT---GELLNLIPACKTKGSTLIGVTEN 128 (201)
T ss_dssp HHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEE----CSSSCC---HHHHTTHHHHHHHTCEEEEEESC
T ss_pred HHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEE----eCCCCC---HHHHHHHHHHHHcCCeEEEEECC
Confidence 45566777889998888764322 24556776653 234532 34667788899999999998854
No 500
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=27.63 E-value=66 Score=29.27 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=59.0
Q ss_pred ccCceEEeecChHHHHHHH-HHHHHCCCeeEEEEeCCCCCchhHHHHHHHHhCCCCEEEEc-c----hHHHHhc------
Q 016064 214 FDGCTILVHGFSRVVMEVL-KMAAQNKKLFRVLCTEGRPDRSGLRLANELAKLDVPVKLLI-D----SAVAYTM------ 281 (396)
Q Consensus 214 ~dg~~ILT~~~S~~V~~~L-~~A~~~gk~f~ViV~EsrP~~eG~~la~~L~~~GI~vtlI~-D----sav~~~m------ 281 (396)
..|.++|..|-|+-+-..+ +...++| .+|+++..+.......++.++.+.|-.+..+. | .++..++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G--~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDG--FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHT--CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467777777776554433 3334445 57887777776667778888888887776653 3 2333333
Q ss_pred -ccCCEEEEcceeEeecCCe-------------eccccHHHHHHHhh
Q 016064 282 -DEVDMVFVGADGVVESGGI-------------INMMGTYQIALVAH 314 (396)
Q Consensus 282 -~~vd~VlvGAd~V~~NG~v-------------~nkiGT~~lAl~Ak 314 (396)
+++|.+|-.|- +...+.+ +|-.|++.+.-.+.
T Consensus 103 ~g~iD~lvnnAG-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~ 148 (267)
T 3u5t_A 103 FGGVDVLVNNAG-IMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148 (267)
T ss_dssp HSCEEEEEECCC-CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCC-CCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777776552 2222222 57778887775553
Done!