Query 016069
Match_columns 396
No_of_seqs 188 out of 2434
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:21:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016069.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016069hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 2.1E-41 7.1E-46 315.1 30.1 340 7-394 3-352 (357)
2 2xve_A Flavin-containing monoo 100.0 5E-41 1.7E-45 322.2 31.0 311 8-394 3-341 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 2E-41 7E-46 329.4 25.6 361 7-391 8-454 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 4.7E-41 1.6E-45 327.3 22.1 363 6-391 8-463 (545)
5 4ap3_A Steroid monooxygenase; 100.0 4.9E-40 1.7E-44 320.3 28.6 362 7-391 21-468 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 3.6E-40 1.2E-44 322.4 26.5 364 7-393 16-465 (542)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 2.5E-38 8.5E-43 302.9 27.7 309 7-394 6-362 (447)
8 3lzw_A Ferredoxin--NADP reduct 100.0 3.5E-37 1.2E-41 283.8 21.0 298 1-395 1-316 (332)
9 3itj_A Thioredoxin reductase 1 100.0 1.4E-36 4.7E-41 280.5 21.3 292 7-395 22-336 (338)
10 2q7v_A Thioredoxin reductase; 100.0 7.4E-36 2.5E-40 274.2 26.0 287 7-394 8-312 (325)
11 3f8d_A Thioredoxin reductase ( 100.0 4E-36 1.4E-40 275.5 22.9 285 7-394 15-317 (323)
12 2q0l_A TRXR, thioredoxin reduc 100.0 9.1E-36 3.1E-40 271.9 23.8 286 8-394 2-309 (311)
13 3fbs_A Oxidoreductase; structu 100.0 5E-36 1.7E-40 271.6 21.7 282 7-394 2-292 (297)
14 2zbw_A Thioredoxin reductase; 100.0 2.3E-35 7.9E-40 272.1 23.6 296 7-395 5-318 (335)
15 4a5l_A Thioredoxin reductase; 100.0 9.4E-36 3.2E-40 272.1 20.3 291 7-394 4-312 (314)
16 3cty_A Thioredoxin reductase; 100.0 3.2E-35 1.1E-39 269.2 22.8 286 7-395 16-317 (319)
17 4gcm_A TRXR, thioredoxin reduc 100.0 2.4E-35 8.2E-40 269.2 21.4 288 1-394 2-306 (312)
18 2a87_A TRXR, TR, thioredoxin r 100.0 3.3E-35 1.1E-39 271.0 22.4 286 7-394 14-316 (335)
19 1vdc_A NTR, NADPH dependent th 100.0 3.6E-35 1.2E-39 270.5 21.9 287 7-394 8-323 (333)
20 1fl2_A Alkyl hydroperoxide red 100.0 5.8E-35 2E-39 266.4 22.3 287 7-394 1-305 (310)
21 3r9u_A Thioredoxin reductase; 100.0 7.9E-35 2.7E-39 266.0 22.9 290 7-394 4-312 (315)
22 3ab1_A Ferredoxin--NADP reduct 100.0 1E-34 3.4E-39 270.5 23.4 297 7-395 14-329 (360)
23 3d1c_A Flavin-containing putat 100.0 2E-34 7E-39 269.3 23.2 309 7-394 4-339 (369)
24 1trb_A Thioredoxin reductase; 100.0 1.3E-34 4.5E-39 265.2 21.1 289 7-394 5-314 (320)
25 4fk1_A Putative thioredoxin re 100.0 2.1E-34 7.3E-39 261.9 21.0 284 7-394 6-300 (304)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.9E-33 1.7E-37 270.4 26.9 287 6-393 211-515 (521)
27 4eqs_A Coenzyme A disulfide re 100.0 3.5E-34 1.2E-38 272.6 18.1 291 9-392 2-311 (437)
28 3oc4_A Oxidoreductase, pyridin 100.0 2.7E-33 9.2E-38 268.3 21.7 285 8-392 3-314 (452)
29 2wpf_A Trypanothione reductase 100.0 4.8E-33 1.6E-37 268.9 22.1 306 7-392 7-355 (495)
30 2hqm_A GR, grase, glutathione 100.0 7.9E-34 2.7E-38 273.7 16.0 308 1-392 5-347 (479)
31 2bc0_A NADH oxidase; flavoprot 100.0 1.1E-33 3.7E-38 273.6 16.0 288 7-392 35-361 (490)
32 3l8k_A Dihydrolipoyl dehydroge 100.0 5E-33 1.7E-37 267.3 19.6 294 7-392 4-333 (466)
33 1zmd_A Dihydrolipoyl dehydroge 100.0 6.9E-33 2.4E-37 267.1 20.5 305 7-392 6-345 (474)
34 1dxl_A Dihydrolipoamide dehydr 100.0 6.5E-33 2.2E-37 267.2 20.1 307 6-392 5-342 (470)
35 1mo9_A ORF3; nucleotide bindin 100.0 9.3E-33 3.2E-37 268.9 20.9 303 6-391 42-377 (523)
36 3iwa_A FAD-dependent pyridine 100.0 2.2E-33 7.5E-38 270.5 16.2 296 7-392 3-329 (472)
37 3urh_A Dihydrolipoyl dehydroge 100.0 1.7E-33 5.9E-38 272.4 15.4 306 7-392 25-363 (491)
38 3ics_A Coenzyme A-disulfide re 100.0 1.1E-33 3.8E-38 279.7 14.1 291 7-391 36-352 (588)
39 1xdi_A RV3303C-LPDA; reductase 100.0 4.6E-33 1.6E-37 269.9 17.3 309 7-392 2-342 (499)
40 1ges_A Glutathione reductase; 100.0 5.6E-33 1.9E-37 265.7 17.6 297 7-392 4-328 (450)
41 2qae_A Lipoamide, dihydrolipoy 100.0 1.4E-32 4.6E-37 264.7 20.3 306 7-392 2-340 (468)
42 3dk9_A Grase, GR, glutathione 100.0 5.5E-33 1.9E-37 268.1 16.5 299 7-392 20-356 (478)
43 1xhc_A NADH oxidase /nitrite r 100.0 4.3E-34 1.5E-38 266.0 8.3 275 8-392 9-297 (367)
44 3ic9_A Dihydrolipoamide dehydr 100.0 3.5E-34 1.2E-38 276.8 7.9 302 7-392 8-338 (492)
45 1ojt_A Surface protein; redox- 100.0 6.5E-32 2.2E-36 260.7 23.7 304 7-392 6-349 (482)
46 1onf_A GR, grase, glutathione 100.0 1.1E-32 3.7E-37 267.0 18.4 298 7-391 2-370 (500)
47 2a8x_A Dihydrolipoyl dehydroge 100.0 2.9E-32 1E-36 262.0 20.8 301 7-391 3-333 (464)
48 3dgz_A Thioredoxin reductase 2 100.0 7.7E-33 2.6E-37 267.6 16.8 305 6-392 5-352 (488)
49 3ntd_A FAD-dependent pyridine 100.0 2.1E-33 7.2E-38 276.8 13.1 290 8-392 2-338 (565)
50 3qfa_A Thioredoxin reductase 1 100.0 1.8E-32 6.1E-37 266.5 19.3 304 7-392 32-380 (519)
51 2r9z_A Glutathione amide reduc 100.0 3E-32 1E-36 261.5 20.6 297 7-392 4-327 (463)
52 3lad_A Dihydrolipoamide dehydr 100.0 7.6E-32 2.6E-36 260.1 22.8 306 7-393 3-344 (476)
53 3kd9_A Coenzyme A disulfide re 100.0 1.4E-32 4.7E-37 263.3 17.4 284 7-392 3-315 (449)
54 4dna_A Probable glutathione re 100.0 1.3E-32 4.6E-37 264.3 17.3 297 7-392 5-331 (463)
55 2gqw_A Ferredoxin reductase; f 100.0 1.6E-32 5.3E-37 259.3 17.3 285 1-393 1-309 (408)
56 1fec_A Trypanothione reductase 100.0 7.2E-32 2.5E-36 260.5 22.1 305 7-392 3-351 (490)
57 1ebd_A E3BD, dihydrolipoamide 100.0 3.5E-32 1.2E-36 260.9 19.6 302 7-392 3-333 (455)
58 1zk7_A HGII, reductase, mercur 100.0 1.9E-32 6.5E-37 263.6 17.3 302 7-392 4-334 (467)
59 2eq6_A Pyruvate dehydrogenase 100.0 3.1E-32 1.1E-36 261.5 18.6 297 7-392 6-334 (464)
60 3lxd_A FAD-dependent pyridine 100.0 1.2E-32 4.2E-37 261.0 15.4 284 6-392 8-321 (415)
61 4b1b_A TRXR, thioredoxin reduc 100.0 5.9E-33 2E-37 268.5 13.5 308 7-392 42-384 (542)
62 1v59_A Dihydrolipoamide dehydr 100.0 1.1E-31 3.8E-36 259.1 21.1 306 7-392 5-350 (478)
63 3klj_A NAD(FAD)-dependent dehy 100.0 6.7E-34 2.3E-38 265.9 5.3 272 7-393 9-295 (385)
64 2yqu_A 2-oxoglutarate dehydrog 100.0 9.4E-32 3.2E-36 257.9 19.8 300 8-392 2-327 (455)
65 3o0h_A Glutathione reductase; 100.0 4.8E-32 1.6E-36 261.8 17.8 298 7-392 26-351 (484)
66 2cdu_A NADPH oxidase; flavoenz 100.0 2.3E-32 8E-37 261.9 15.2 290 8-392 1-317 (452)
67 3dgh_A TRXR-1, thioredoxin red 100.0 5.9E-32 2E-36 261.2 17.8 303 6-392 8-352 (483)
68 3ef6_A Toluene 1,2-dioxygenase 100.0 6.2E-33 2.1E-37 262.3 10.5 282 8-393 3-310 (410)
69 4g6h_A Rotenone-insensitive NA 100.0 1.2E-32 4.1E-37 265.7 11.1 300 7-392 42-399 (502)
70 1nhp_A NADH peroxidase; oxidor 100.0 1.3E-31 4.4E-36 256.4 16.9 287 8-392 1-316 (447)
71 2vdc_G Glutamate synthase [NAD 100.0 9.5E-32 3.3E-36 256.1 14.7 275 6-393 121-443 (456)
72 3fg2_P Putative rubredoxin red 100.0 4.1E-32 1.4E-36 256.4 12.1 281 8-392 2-310 (404)
73 3s5w_A L-ornithine 5-monooxyge 100.0 6.7E-31 2.3E-35 252.8 20.1 349 7-389 30-444 (463)
74 1q1r_A Putidaredoxin reductase 100.0 7.5E-32 2.6E-36 256.4 12.3 285 7-393 4-320 (431)
75 4b63_A L-ornithine N5 monooxyg 100.0 4.1E-30 1.4E-34 248.5 24.4 343 7-371 39-457 (501)
76 3cgb_A Pyridine nucleotide-dis 100.0 2.4E-31 8.1E-36 256.5 15.7 289 7-392 36-353 (480)
77 2v3a_A Rubredoxin reductase; a 100.0 3.1E-31 1.1E-35 248.8 16.1 281 7-392 4-306 (384)
78 1lvl_A Dihydrolipoamide dehydr 100.0 1.5E-30 5.2E-35 249.4 20.8 295 7-391 5-329 (458)
79 2x8g_A Thioredoxin glutathione 100.0 2.5E-30 8.4E-35 256.2 18.0 303 6-392 106-459 (598)
80 3h8l_A NADH oxidase; membrane 100.0 9.3E-31 3.2E-35 247.8 11.3 284 8-393 2-335 (409)
81 3sx6_A Sulfide-quinone reducta 100.0 2.1E-30 7E-35 247.2 13.6 289 7-394 4-344 (437)
82 1lqt_A FPRA; NADP+ derivative, 100.0 4.9E-29 1.7E-33 237.8 12.3 296 7-393 3-386 (456)
83 3k30_A Histamine dehydrogenase 100.0 4.4E-29 1.5E-33 250.5 9.0 268 6-394 390-675 (690)
84 1m6i_A Programmed cell death p 100.0 2.9E-29 9.8E-34 242.4 7.0 303 6-393 10-353 (493)
85 1cjc_A Protein (adrenodoxin re 100.0 1.9E-28 6.7E-33 233.9 12.2 303 6-393 5-394 (460)
86 2gag_A Heterotetrameric sarcos 99.9 4.8E-27 1.6E-31 242.8 19.7 282 7-394 128-444 (965)
87 1gte_A Dihydropyrimidine dehyd 99.9 8.5E-28 2.9E-32 250.0 14.0 277 7-393 187-507 (1025)
88 1o94_A Tmadh, trimethylamine d 99.9 1E-27 3.5E-32 241.5 11.1 278 6-394 388-700 (729)
89 3h28_A Sulfide-quinone reducta 99.9 1.2E-28 4.1E-33 234.6 3.4 284 8-394 3-333 (430)
90 3hyw_A Sulfide-quinone reducta 99.9 2.8E-29 9.6E-34 238.7 -1.1 285 8-394 3-333 (430)
91 3vrd_B FCCB subunit, flavocyto 99.9 2.5E-27 8.5E-32 223.7 11.7 285 7-394 2-324 (401)
92 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.3E-26 4.3E-31 232.1 14.7 273 7-389 373-671 (671)
93 1y56_A Hypothetical protein PH 99.9 3.8E-25 1.3E-29 213.6 12.9 255 7-393 108-376 (493)
94 2ywl_A Thioredoxin reductase r 99.7 2.8E-16 9.6E-21 130.8 10.1 160 188-394 3-171 (180)
95 3fpz_A Thiazole biosynthetic e 99.6 4.9E-19 1.7E-23 162.0 -11.7 150 7-219 65-216 (326)
96 2gqf_A Hypothetical protein HI 99.6 3.2E-15 1.1E-19 140.2 11.9 135 7-152 4-171 (401)
97 2e5v_A L-aspartate oxidase; ar 99.5 1.1E-15 3.8E-20 146.4 0.5 192 9-226 1-248 (472)
98 3v76_A Flavoprotein; structura 99.3 8.9E-12 3E-16 117.1 12.4 134 7-153 27-191 (417)
99 2cul_A Glucose-inhibited divis 99.3 3.5E-12 1.2E-16 110.4 7.9 176 187-393 4-231 (232)
100 3nix_A Flavoprotein/dehydrogen 99.3 2.3E-11 7.7E-16 115.0 13.1 133 7-149 5-166 (421)
101 3oz2_A Digeranylgeranylglycero 99.3 9.6E-12 3.3E-16 116.4 10.4 135 7-149 4-162 (397)
102 3cgv_A Geranylgeranyl reductas 99.3 1.3E-11 4.5E-16 115.7 11.2 134 7-149 4-162 (397)
103 2ywl_A Thioredoxin reductase r 99.3 5.1E-11 1.7E-15 98.7 13.3 111 8-153 2-112 (180)
104 3ces_A MNMG, tRNA uridine 5-ca 99.2 7E-12 2.4E-16 122.2 7.3 168 7-217 28-221 (651)
105 2cul_A Glucose-inhibited divis 99.2 3.7E-11 1.3E-15 103.9 10.2 124 7-151 3-127 (232)
106 3fmw_A Oxygenase; mithramycin, 99.2 5.7E-11 1.9E-15 116.2 12.3 134 7-149 49-207 (570)
107 2bry_A NEDD9 interacting prote 99.2 1.6E-11 5.4E-16 118.4 7.7 139 6-151 91-232 (497)
108 2qa1_A PGAE, polyketide oxygen 99.2 9E-11 3.1E-15 113.2 12.9 136 5-149 9-165 (500)
109 3rp8_A Flavoprotein monooxygen 99.2 3E-11 1E-15 113.7 9.2 131 6-150 22-182 (407)
110 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 2.7E-11 9.2E-16 111.2 8.1 128 8-147 2-163 (342)
111 1yvv_A Amine oxidase, flavin-c 99.2 1.8E-10 6.1E-15 105.4 13.4 130 7-149 2-162 (336)
112 2xdo_A TETX2 protein; tetracyc 99.2 1.1E-10 3.7E-15 109.5 12.0 130 7-151 26-184 (398)
113 3e1t_A Halogenase; flavoprotei 99.2 8.7E-11 3E-15 113.8 11.4 141 1-149 1-172 (512)
114 2qa2_A CABE, polyketide oxygen 99.2 1.4E-10 4.6E-15 111.9 12.6 135 6-149 11-166 (499)
115 3ihg_A RDME; flavoenzyme, anth 99.2 2.5E-10 8.6E-15 111.3 14.5 134 7-149 5-183 (535)
116 2gmh_A Electron transfer flavo 99.2 2.9E-10 1E-14 111.6 14.3 140 7-149 35-217 (584)
117 3dje_A Fructosyl amine: oxygen 99.2 1.7E-10 5.8E-15 109.6 12.3 62 79-152 159-224 (438)
118 2zxi_A TRNA uridine 5-carboxym 99.2 9.3E-11 3.2E-15 113.9 10.4 168 7-217 27-220 (637)
119 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.1E-10 3.6E-15 108.9 9.6 125 7-149 11-160 (379)
120 3dme_A Conserved exported prot 99.1 3E-10 1E-14 105.1 12.2 62 79-149 148-209 (369)
121 2x3n_A Probable FAD-dependent 99.1 1.2E-10 4.2E-15 109.2 9.4 131 7-149 6-166 (399)
122 2i0z_A NAD(FAD)-utilizing dehy 99.1 8.5E-11 2.9E-15 111.9 8.3 134 7-151 26-193 (447)
123 2dkh_A 3-hydroxybenzoate hydro 99.1 7.6E-10 2.6E-14 109.9 15.0 141 6-149 31-211 (639)
124 3i3l_A Alkylhalidase CMLS; fla 99.1 4.3E-10 1.5E-14 110.2 12.7 135 7-149 23-188 (591)
125 2r0c_A REBC; flavin adenine di 99.1 7E-10 2.4E-14 108.3 13.9 133 7-149 26-196 (549)
126 1k0i_A P-hydroxybenzoate hydro 99.1 1.9E-10 6.4E-15 107.7 8.7 135 8-151 3-165 (394)
127 3cp8_A TRNA uridine 5-carboxym 99.1 1.4E-10 4.8E-15 113.0 7.9 172 6-217 20-215 (641)
128 2vou_A 2,6-dihydroxypyridine h 99.1 6.5E-10 2.2E-14 104.2 12.3 129 7-150 5-154 (397)
129 3nlc_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 109.1 10.7 132 7-149 107-277 (549)
130 3c96_A Flavin-containing monoo 99.1 1.8E-09 6.1E-14 101.6 14.8 136 7-150 4-170 (410)
131 1ryi_A Glycine oxidase; flavop 99.1 6.3E-10 2.1E-14 103.6 11.0 60 77-149 160-219 (382)
132 3atr_A Conserved archaeal prot 99.1 3.5E-10 1.2E-14 107.9 9.2 136 7-150 6-163 (453)
133 1rp0_A ARA6, thiazole biosynth 99.1 1.5E-09 5.1E-14 96.8 12.7 134 7-147 39-189 (284)
134 4hb9_A Similarities with proba 99.0 7.2E-10 2.5E-14 104.2 10.9 128 8-149 2-166 (412)
135 2uzz_A N-methyl-L-tryptophan o 99.0 9.6E-10 3.3E-14 102.0 11.5 62 80-154 148-209 (372)
136 1y0p_A Fumarate reductase flav 99.0 3.1E-09 1.1E-13 104.3 14.6 138 7-150 126-318 (571)
137 3ps9_A TRNA 5-methylaminomethy 99.0 1.3E-09 4.5E-14 109.1 11.9 60 79-150 415-474 (676)
138 1qo8_A Flavocytochrome C3 fuma 99.0 3.6E-09 1.2E-13 103.7 13.9 138 7-150 121-313 (566)
139 1y56_B Sarcosine oxidase; dehy 99.0 1.8E-09 6.3E-14 100.5 11.1 59 78-149 146-205 (382)
140 3pvc_A TRNA 5-methylaminomethy 99.0 4.6E-09 1.6E-13 105.4 14.1 60 79-150 410-470 (689)
141 3jsk_A Cypbp37 protein; octame 99.0 6.9E-10 2.4E-14 100.2 7.0 105 7-113 79-191 (344)
142 2gf3_A MSOX, monomeric sarcosi 99.0 4.1E-09 1.4E-13 98.3 12.5 58 79-149 148-205 (389)
143 1pn0_A Phenol 2-monooxygenase; 99.0 7.8E-09 2.7E-13 103.0 15.0 139 7-149 8-230 (665)
144 3nyc_A D-arginine dehydrogenas 99.0 1.5E-09 5.1E-14 100.9 9.1 59 78-149 151-209 (381)
145 3da1_A Glycerol-3-phosphate de 98.9 6.7E-09 2.3E-13 101.4 13.6 66 78-149 167-232 (561)
146 2oln_A NIKD protein; flavoprot 98.9 4.8E-09 1.6E-13 98.2 11.6 57 80-149 152-208 (397)
147 2gag_B Heterotetrameric sarcos 98.9 5.4E-09 1.8E-13 98.1 11.7 60 78-149 171-230 (405)
148 4at0_A 3-ketosteroid-delta4-5a 98.9 1.5E-08 5E-13 98.1 14.7 38 7-44 41-78 (510)
149 2aqj_A Tryptophan halogenase, 98.9 2.9E-09 1E-13 103.8 9.0 62 78-150 162-223 (538)
150 2qcu_A Aerobic glycerol-3-phos 98.9 1.5E-08 5.1E-13 97.8 13.5 64 79-149 147-210 (501)
151 3c4n_A Uncharacterized protein 98.8 2.4E-09 8.2E-14 100.6 6.3 35 7-41 36-72 (405)
152 3k7m_X 6-hydroxy-L-nicotine ox 98.8 1.9E-08 6.5E-13 95.2 11.4 38 8-45 2-39 (431)
153 3kkj_A Amine oxidase, flavin-c 98.8 4.7E-09 1.6E-13 92.8 6.7 46 8-53 3-48 (336)
154 2gjc_A Thiazole biosynthetic e 98.8 2.7E-08 9.2E-13 89.3 11.5 105 7-113 65-177 (326)
155 2wdq_A Succinate dehydrogenase 98.8 5.6E-08 1.9E-12 95.3 14.5 145 1-150 1-207 (588)
156 2pyx_A Tryptophan halogenase; 98.8 2.2E-08 7.6E-13 97.2 11.4 62 78-150 172-234 (526)
157 2e4g_A Tryptophan halogenase; 98.8 1.4E-08 4.9E-13 99.1 9.5 62 78-150 191-253 (550)
158 2weu_A Tryptophan 5-halogenase 98.8 2.1E-08 7E-13 97.2 10.3 62 78-150 170-231 (511)
159 1d4d_A Flavocytochrome C fumar 98.8 7E-08 2.4E-12 94.6 14.0 136 7-149 126-317 (572)
160 3nrn_A Uncharacterized protein 98.8 1.5E-08 5.1E-13 95.6 9.0 39 8-46 1-39 (421)
161 3i6d_A Protoporphyrinogen oxid 98.8 1.7E-08 5.7E-13 96.6 8.8 38 7-44 5-48 (470)
162 3ka7_A Oxidoreductase; structu 98.7 2.7E-08 9.2E-13 94.0 10.0 39 8-46 1-39 (425)
163 1pj5_A N,N-dimethylglycine oxi 98.7 5E-08 1.7E-12 100.0 11.7 58 79-149 149-207 (830)
164 2rgh_A Alpha-glycerophosphate 98.7 1E-07 3.5E-12 93.2 12.6 65 79-149 186-250 (571)
165 2yqu_A 2-oxoglutarate dehydrog 98.6 1.8E-07 6E-12 89.2 12.0 101 7-154 167-267 (455)
166 2v3a_A Rubredoxin reductase; a 98.6 1.8E-07 6.1E-12 87.1 11.6 101 7-153 145-245 (384)
167 2h88_A Succinate dehydrogenase 98.6 3E-07 1E-11 90.5 13.3 36 7-42 18-53 (621)
168 1kf6_A Fumarate reductase flav 98.6 3.3E-07 1.1E-11 90.1 13.2 36 7-42 5-42 (602)
169 4gde_A UDP-galactopyranose mut 98.6 3.1E-08 1.1E-12 95.9 5.8 47 1-47 4-51 (513)
170 2eq6_A Pyruvate dehydrogenase 98.6 3.3E-07 1.1E-11 87.5 12.8 104 7-155 169-275 (464)
171 3c4a_A Probable tryptophan hyd 98.6 1.3E-08 4.5E-13 94.7 2.7 119 8-150 1-144 (381)
172 1chu_A Protein (L-aspartate ox 98.6 2.6E-08 8.8E-13 96.8 4.3 37 7-44 8-44 (540)
173 1rp0_A ARA6, thiazole biosynth 98.6 4.6E-08 1.6E-12 87.1 5.5 189 187-395 40-276 (284)
174 2e1m_A L-glutamate oxidase; L- 98.6 2.3E-07 7.9E-12 85.3 10.0 43 6-48 43-86 (376)
175 3hyw_A Sulfide-quinone reducta 98.6 1.2E-07 4.1E-12 89.6 8.2 104 186-332 2-110 (430)
176 3axb_A Putative oxidoreductase 98.6 9.7E-08 3.3E-12 90.8 7.5 32 7-38 23-55 (448)
177 1ebd_A E3BD, dihydrolipoamide 98.5 7E-07 2.4E-11 85.0 13.2 104 7-154 170-273 (455)
178 2bs2_A Quinol-fumarate reducta 98.5 8.3E-07 2.8E-11 87.9 13.9 36 7-42 5-40 (660)
179 4b1b_A TRXR, thioredoxin reduc 98.5 5.4E-07 1.9E-11 87.1 12.1 103 6-156 222-324 (542)
180 1nhp_A NADH peroxidase; oxidor 98.5 3.4E-07 1.2E-11 87.0 10.3 101 7-154 149-249 (447)
181 3gyx_A Adenylylsulfate reducta 98.5 6.4E-07 2.2E-11 88.7 12.3 35 7-41 22-62 (662)
182 1v59_A Dihydrolipoamide dehydr 98.5 9.3E-07 3.2E-11 84.7 12.9 108 7-154 183-290 (478)
183 4gut_A Lysine-specific histone 98.5 9.2E-07 3.2E-11 89.1 13.3 38 7-44 336-373 (776)
184 1ges_A Glutathione reductase; 98.5 6.2E-07 2.1E-11 85.2 11.4 102 7-154 167-268 (450)
185 2r9z_A Glutathione amide reduc 98.5 7.9E-07 2.7E-11 84.8 11.5 101 7-154 166-267 (463)
186 1jnr_A Adenylylsulfate reducta 98.4 2.2E-06 7.5E-11 85.0 14.2 35 7-41 22-60 (643)
187 3lxd_A FAD-dependent pyridine 98.4 1.5E-06 5.1E-11 81.7 12.4 102 7-153 152-253 (415)
188 3sx6_A Sulfide-quinone reducta 98.4 5.1E-07 1.7E-11 85.5 9.3 105 187-334 5-115 (437)
189 2b9w_A Putative aminooxidase; 98.4 2.8E-07 9.7E-12 86.9 7.1 47 1-48 1-48 (424)
190 2a8x_A Dihydrolipoyl dehydroge 98.4 1.6E-06 5.3E-11 82.8 12.3 103 7-154 171-274 (464)
191 1zmd_A Dihydrolipoyl dehydroge 98.4 2.8E-06 9.5E-11 81.3 14.0 105 7-154 178-285 (474)
192 1onf_A GR, grase, glutathione 98.4 2E-06 7E-11 82.8 13.1 102 7-154 176-278 (500)
193 1lvl_A Dihydrolipoamide dehydr 98.4 5.8E-07 2E-11 85.6 9.1 102 7-155 171-272 (458)
194 3urh_A Dihydrolipoyl dehydroge 98.4 3.1E-06 1E-10 81.4 14.2 106 7-154 198-303 (491)
195 1dxl_A Dihydrolipoamide dehydr 98.4 1.1E-06 3.9E-11 83.9 11.1 103 7-154 177-282 (470)
196 1zk7_A HGII, reductase, mercur 98.4 1.3E-06 4.4E-11 83.5 11.4 98 7-153 176-273 (467)
197 3vrd_B FCCB subunit, flavocyto 98.4 5.1E-07 1.7E-11 84.5 8.3 106 186-335 2-112 (401)
198 2bcg_G Secretory pathway GDP d 98.4 2.3E-07 7.9E-12 88.3 5.9 46 3-48 7-52 (453)
199 4dgk_A Phytoene dehydrogenase; 98.4 1.9E-07 6.4E-12 90.2 5.2 39 8-46 2-40 (501)
200 2qae_A Lipoamide, dihydrolipoy 98.4 2.1E-06 7E-11 82.1 12.4 103 7-154 174-279 (468)
201 1v0j_A UDP-galactopyranose mut 98.4 2.4E-07 8.3E-12 86.6 5.7 49 1-49 1-50 (399)
202 3klj_A NAD(FAD)-dependent dehy 98.4 6E-07 2.1E-11 83.4 8.3 108 185-334 8-119 (385)
203 2gqw_A Ferredoxin reductase; f 98.4 1.5E-06 5.3E-11 81.4 11.0 97 7-153 145-241 (408)
204 3fg2_P Putative rubredoxin red 98.4 1.5E-06 5.1E-11 81.4 10.9 102 7-153 142-243 (404)
205 3oc4_A Oxidoreductase, pyridin 98.4 3.7E-06 1.3E-10 79.9 13.5 102 7-155 147-248 (452)
206 1q1r_A Putidaredoxin reductase 98.4 1.7E-06 5.9E-11 81.7 11.0 102 7-153 149-252 (431)
207 3ef6_A Toluene 1,2-dioxygenase 98.4 6.1E-07 2.1E-11 84.2 7.9 101 7-153 143-243 (410)
208 1ojt_A Surface protein; redox- 98.4 9.2E-07 3.2E-11 84.8 9.2 104 7-153 185-288 (482)
209 1mo9_A ORF3; nucleotide bindin 98.4 2.3E-06 7.8E-11 82.9 12.0 100 8-153 215-318 (523)
210 1xdi_A RV3303C-LPDA; reductase 98.4 2.2E-06 7.6E-11 82.5 11.7 100 7-153 182-281 (499)
211 3ic9_A Dihydrolipoamide dehydr 98.4 3.7E-06 1.3E-10 80.8 13.0 105 7-155 174-278 (492)
212 3iwa_A FAD-dependent pyridine 98.4 2.3E-06 7.9E-11 81.8 11.5 101 7-153 159-260 (472)
213 1fec_A Trypanothione reductase 98.3 2.6E-06 9E-11 81.8 11.8 102 7-154 187-291 (490)
214 3dgh_A TRXR-1, thioredoxin red 98.3 7E-06 2.4E-10 78.7 14.7 106 7-154 187-292 (483)
215 2wpf_A Trypanothione reductase 98.3 3.1E-06 1.1E-10 81.3 12.2 101 7-153 191-294 (495)
216 2cdu_A NADPH oxidase; flavoenz 98.3 2.7E-06 9.2E-11 80.9 11.5 102 7-154 149-250 (452)
217 2bc0_A NADH oxidase; flavoprot 98.3 2.7E-06 9.2E-11 81.8 11.4 101 7-154 194-294 (490)
218 2hqm_A GR, grase, glutathione 98.3 3.3E-06 1.1E-10 80.9 11.7 103 7-153 185-287 (479)
219 3cgb_A Pyridine nucleotide-dis 98.3 1.7E-06 5.8E-11 82.9 9.7 99 7-153 186-284 (480)
220 3o0h_A Glutathione reductase; 98.3 3E-06 1E-10 81.3 11.3 101 7-154 191-291 (484)
221 1xhc_A NADH oxidase /nitrite r 98.3 1.2E-06 4.2E-11 80.8 8.2 93 8-153 144-236 (367)
222 3dgz_A Thioredoxin reductase 2 98.3 9.8E-06 3.3E-10 77.8 14.7 106 7-154 185-290 (488)
223 3h28_A Sulfide-quinone reducta 98.3 1.6E-06 5.5E-11 81.9 8.4 105 187-334 3-112 (430)
224 3ntd_A FAD-dependent pyridine 98.3 4.3E-06 1.5E-10 81.9 11.7 102 7-153 151-269 (565)
225 1trb_A Thioredoxin reductase; 98.3 5.1E-06 1.7E-10 75.0 11.3 105 7-153 145-249 (320)
226 3hdq_A UDP-galactopyranose mut 98.3 1.2E-06 4.1E-11 81.2 6.9 43 7-49 29-71 (397)
227 3h8l_A NADH oxidase; membrane 98.3 2.3E-06 7.9E-11 80.2 8.9 105 187-334 2-116 (409)
228 3lad_A Dihydrolipoamide dehydr 98.2 1.2E-05 4.3E-10 76.8 13.9 104 7-154 180-283 (476)
229 1m6i_A Programmed cell death p 98.2 4.9E-06 1.7E-10 79.9 11.1 101 7-153 180-284 (493)
230 3dk9_A Grase, GR, glutathione 98.2 1E-05 3.6E-10 77.4 13.2 110 7-154 187-296 (478)
231 4dsg_A UDP-galactopyranose mut 98.2 1.5E-06 5.2E-11 83.3 7.1 52 6-57 8-61 (484)
232 4eqs_A Coenzyme A disulfide re 98.2 2.4E-06 8.3E-11 80.7 8.4 96 7-153 147-242 (437)
233 1rsg_A FMS1 protein; FAD bindi 98.2 6.9E-07 2.4E-11 86.5 4.6 40 7-46 8-48 (516)
234 2ivd_A PPO, PPOX, protoporphyr 98.2 1E-06 3.6E-11 84.3 5.7 40 7-46 16-55 (478)
235 3s5w_A L-ornithine 5-monooxyge 98.2 1.7E-05 5.7E-10 75.6 13.9 132 7-152 227-378 (463)
236 2yg5_A Putrescine oxidase; oxi 98.2 1.2E-06 3.9E-11 83.4 5.4 41 7-47 5-45 (453)
237 4dna_A Probable glutathione re 98.2 1E-05 3.5E-10 77.1 11.9 101 7-154 170-271 (463)
238 3fbs_A Oxidoreductase; structu 98.2 3.2E-06 1.1E-10 75.3 7.8 107 187-334 3-115 (297)
239 1s3e_A Amine oxidase [flavin-c 98.2 1.5E-06 5E-11 84.3 5.7 40 7-46 4-43 (520)
240 2zbw_A Thioredoxin reductase; 98.2 1.3E-05 4.5E-10 72.7 11.7 103 7-153 152-254 (335)
241 3qfa_A Thioredoxin reductase 1 98.2 3.2E-05 1.1E-09 74.8 14.6 107 7-154 210-318 (519)
242 1sez_A Protoporphyrinogen oxid 98.1 1.9E-06 6.5E-11 83.2 5.9 42 7-48 13-54 (504)
243 2vvm_A Monoamine oxidase N; FA 98.1 2.3E-06 8E-11 82.3 5.8 39 8-46 40-78 (495)
244 2bi7_A UDP-galactopyranose mut 98.1 2.7E-06 9.1E-11 79.0 5.7 43 7-49 3-45 (384)
245 3ics_A Coenzyme A-disulfide re 98.1 1E-05 3.5E-10 79.6 10.2 98 7-153 187-284 (588)
246 2jae_A L-amino acid oxidase; o 98.1 2.7E-06 9.1E-11 81.8 5.9 41 6-46 10-50 (489)
247 1i8t_A UDP-galactopyranose mut 98.1 2.7E-06 9.2E-11 78.5 5.6 41 8-48 2-42 (367)
248 3lov_A Protoporphyrinogen oxid 98.1 2.9E-06 9.8E-11 81.2 5.6 40 7-46 4-45 (475)
249 3nks_A Protoporphyrinogen oxid 98.1 2.3E-06 8E-11 81.9 4.9 39 8-46 3-43 (477)
250 3kd9_A Coenzyme A disulfide re 98.0 1.9E-05 6.6E-10 74.9 10.6 99 7-153 148-246 (449)
251 4g6h_A Rotenone-insensitive NA 98.0 2.1E-05 7.1E-10 75.6 10.7 102 8-152 218-333 (502)
252 3d1c_A Flavin-containing putat 98.0 1.5E-05 5E-10 73.5 9.3 108 7-153 166-274 (369)
253 2iid_A L-amino-acid oxidase; f 98.0 3.9E-06 1.3E-10 80.9 5.5 41 6-46 32-72 (498)
254 3ab1_A Ferredoxin--NADP reduct 98.0 2.1E-05 7.2E-10 72.2 10.0 101 7-153 163-265 (360)
255 3l8k_A Dihydrolipoyl dehydroge 98.0 3.3E-05 1.1E-09 73.6 10.8 102 7-154 172-275 (466)
256 1b37_A Protein (polyamine oxid 98.0 6.9E-06 2.4E-10 78.5 5.7 42 7-48 4-46 (472)
257 1d5t_A Guanine nucleotide diss 97.9 8.9E-06 3E-10 76.8 5.8 42 7-48 6-47 (433)
258 1c0p_A D-amino acid oxidase; a 97.9 9.7E-06 3.3E-10 74.6 5.8 34 7-40 6-39 (363)
259 1fl2_A Alkyl hydroperoxide red 97.9 7.6E-05 2.6E-09 66.8 11.6 99 7-153 144-244 (310)
260 3ihm_A Styrene monooxygenase A 97.9 5.9E-06 2E-10 78.0 4.2 34 7-40 22-55 (430)
261 2x8g_A Thioredoxin glutathione 97.9 0.00012 4.1E-09 72.0 13.8 105 7-153 286-397 (598)
262 3itj_A Thioredoxin reductase 1 97.9 7.7E-05 2.6E-09 67.5 10.7 100 7-153 173-273 (338)
263 3p1w_A Rabgdi protein; GDI RAB 97.9 1.3E-05 4.5E-10 75.8 5.5 41 7-47 20-60 (475)
264 4fk1_A Putative thioredoxin re 97.9 3E-05 1E-09 69.4 7.6 32 188-219 8-39 (304)
265 3cty_A Thioredoxin reductase; 97.9 6.8E-05 2.3E-09 67.5 10.1 100 7-153 155-254 (319)
266 3f8d_A Thioredoxin reductase ( 97.8 8.1E-05 2.8E-09 66.9 10.3 99 7-152 154-252 (323)
267 2q7v_A Thioredoxin reductase; 97.8 6.5E-05 2.2E-09 67.8 9.6 100 7-153 152-251 (325)
268 3lzw_A Ferredoxin--NADP reduct 97.8 0.00013 4.6E-09 65.7 11.6 99 7-153 154-252 (332)
269 3v76_A Flavoprotein; structura 97.8 9.4E-06 3.2E-10 76.0 3.6 34 186-219 27-60 (417)
270 2q0l_A TRXR, thioredoxin reduc 97.8 8.9E-05 3E-09 66.4 9.8 101 7-153 143-243 (311)
271 1vdc_A NTR, NADPH dependent th 97.8 0.00013 4.6E-09 65.9 11.0 102 7-153 159-261 (333)
272 3pl8_A Pyranose 2-oxidase; sub 97.8 1.8E-05 6E-10 78.1 5.0 40 7-46 46-85 (623)
273 2z3y_A Lysine-specific histone 97.8 2.8E-05 9.5E-10 77.5 6.3 42 6-47 106-147 (662)
274 3g3e_A D-amino-acid oxidase; F 97.7 1.5E-05 5E-10 73.0 3.8 33 8-40 1-39 (351)
275 4a9w_A Monooxygenase; baeyer-v 97.7 2.4E-05 8.1E-10 71.5 4.9 33 187-219 4-36 (357)
276 2xag_A Lysine-specific histone 97.7 3.5E-05 1.2E-09 78.3 6.4 41 6-46 277-317 (852)
277 3alj_A 2-methyl-3-hydroxypyrid 97.7 6.1E-05 2.1E-09 69.7 7.4 138 186-333 11-162 (379)
278 2a87_A TRXR, TR, thioredoxin r 97.7 9.5E-05 3.2E-09 67.1 8.6 101 7-154 155-255 (335)
279 2bry_A NEDD9 interacting prote 97.7 4.2E-05 1.4E-09 73.4 6.4 128 186-334 92-233 (497)
280 3r9u_A Thioredoxin reductase; 97.7 5.5E-05 1.9E-09 67.8 6.8 98 7-153 147-246 (315)
281 3g5s_A Methylenetetrahydrofola 97.6 5.4E-05 1.8E-09 69.0 5.6 35 8-42 2-36 (443)
282 2gqf_A Hypothetical protein HI 97.6 6.7E-05 2.3E-09 69.9 6.5 33 187-219 5-37 (401)
283 4gcm_A TRXR, thioredoxin reduc 97.6 7.6E-05 2.6E-09 67.0 6.6 32 188-219 8-39 (312)
284 3k30_A Histamine dehydrogenase 97.6 0.00015 5.2E-09 72.5 9.2 101 7-152 523-625 (690)
285 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00032 1.1E-08 67.7 11.0 99 7-153 355-455 (521)
286 3nlc_A Uncharacterized protein 97.6 0.0002 6.8E-09 69.2 9.4 34 186-219 107-140 (549)
287 2i0z_A NAD(FAD)-utilizing dehy 97.6 8.1E-05 2.8E-09 70.5 6.6 33 187-219 27-59 (447)
288 4a5l_A Thioredoxin reductase; 97.6 0.00024 8.3E-09 63.6 9.0 34 7-40 152-185 (314)
289 4ap3_A Steroid monooxygenase; 97.4 0.00017 5.9E-09 70.0 6.7 34 186-219 21-54 (549)
290 2x3n_A Probable FAD-dependent 97.4 0.00037 1.3E-08 64.8 8.4 138 187-333 7-168 (399)
291 3gwf_A Cyclohexanone monooxyge 97.4 0.00021 7.2E-09 69.2 6.6 33 187-219 9-42 (540)
292 3t37_A Probable dehydrogenase; 97.4 0.00011 3.8E-09 71.1 4.5 35 7-41 17-52 (526)
293 1kdg_A CDH, cellobiose dehydro 97.4 0.00015 5E-09 70.6 5.2 35 6-40 6-40 (546)
294 2gag_A Heterotetrameric sarcos 97.4 0.00077 2.6E-08 69.9 10.7 97 8-153 285-385 (965)
295 1vg0_A RAB proteins geranylger 97.4 0.0002 6.9E-09 70.0 6.0 45 4-48 5-49 (650)
296 2xve_A Flavin-containing monoo 97.3 0.0006 2E-08 64.8 8.8 34 7-40 197-230 (464)
297 3uox_A Otemo; baeyer-villiger 97.3 0.00017 5.8E-09 70.0 5.0 34 186-219 9-42 (545)
298 3k7m_X 6-hydroxy-L-nicotine ox 97.3 0.00058 2E-08 64.1 8.1 32 188-219 3-34 (431)
299 2gjc_A Thiazole biosynthetic e 97.3 5.1E-05 1.7E-09 68.0 0.6 32 188-219 67-100 (326)
300 3fmw_A Oxygenase; mithramycin, 97.3 6.7E-05 2.3E-09 73.2 1.4 34 187-220 50-83 (570)
301 2gv8_A Monooxygenase; FMO, FAD 97.2 0.00081 2.8E-08 63.6 8.7 34 7-40 212-246 (447)
302 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00012 4E-09 72.6 2.8 36 7-42 56-100 (721)
303 2vou_A 2,6-dihydroxypyridine h 97.2 0.00069 2.4E-08 62.9 7.7 35 186-220 5-39 (397)
304 1cjc_A Protein (adrenodoxin re 97.2 0.0025 8.5E-08 60.4 11.6 35 7-41 145-200 (460)
305 2zxi_A TRNA uridine 5-carboxym 97.2 0.00018 6E-09 70.1 3.6 144 187-334 28-183 (637)
306 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00014 4.6E-09 71.2 2.7 143 187-333 29-183 (651)
307 1ju2_A HydroxynitrIle lyase; f 97.2 0.00019 6.5E-09 69.5 3.7 35 7-42 26-60 (536)
308 2vdc_G Glutamate synthase [NAD 97.2 0.001 3.6E-08 62.9 8.7 34 7-40 264-298 (456)
309 1yvv_A Amine oxidase, flavin-c 97.1 0.00071 2.4E-08 61.1 6.9 33 187-219 3-35 (336)
310 3cp8_A TRNA uridine 5-carboxym 97.1 0.0002 6.7E-09 70.0 3.1 34 186-219 21-54 (641)
311 3q9t_A Choline dehydrogenase a 97.1 0.00034 1.2E-08 68.1 4.6 35 7-41 6-41 (577)
312 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00087 3E-08 66.8 7.5 29 7-35 494-522 (671)
313 3jsk_A Cypbp37 protein; octame 97.1 0.00058 2E-08 61.6 5.6 33 187-219 80-114 (344)
314 1o94_A Tmadh, trimethylamine d 97.1 0.0015 5.1E-08 65.7 9.2 104 7-153 528-648 (729)
315 4hb9_A Similarities with proba 97.1 0.00076 2.6E-08 62.7 6.5 32 188-219 3-34 (412)
316 3rp8_A Flavoprotein monooxygen 97.1 0.00031 1.1E-08 65.5 3.7 34 186-219 23-56 (407)
317 3nix_A Flavoprotein/dehydrogen 97.0 0.00041 1.4E-08 65.0 4.2 33 187-219 6-38 (421)
318 3nrn_A Uncharacterized protein 97.0 0.0028 9.6E-08 59.3 9.9 33 187-219 1-33 (421)
319 3qvp_A Glucose oxidase; oxidor 97.0 0.00048 1.7E-08 67.1 4.6 34 7-40 19-53 (583)
320 1lqt_A FPRA; NADP+ derivative, 97.0 0.0033 1.1E-07 59.5 10.3 35 7-41 147-202 (456)
321 1y0p_A Fumarate reductase flav 97.0 0.0025 8.6E-08 62.2 9.8 34 186-219 126-159 (571)
322 1n4w_A CHOD, cholesterol oxida 97.0 0.00066 2.2E-08 65.3 5.5 37 7-43 5-41 (504)
323 3i3l_A Alkylhalidase CMLS; fla 97.0 0.00045 1.5E-08 67.6 4.3 34 186-219 23-56 (591)
324 1k0i_A P-hydroxybenzoate hydro 97.0 0.0031 1.1E-07 58.3 9.8 33 187-219 3-35 (394)
325 1qo8_A Flavocytochrome C3 fuma 96.9 0.0022 7.7E-08 62.5 8.9 33 187-219 122-154 (566)
326 1coy_A Cholesterol oxidase; ox 96.9 0.00071 2.4E-08 65.1 5.0 35 7-41 11-45 (507)
327 3qj4_A Renalase; FAD/NAD(P)-bi 96.9 0.00082 2.8E-08 61.0 4.9 33 187-219 2-37 (342)
328 2g1u_A Hypothetical protein TM 96.9 0.0011 3.6E-08 52.7 5.0 40 1-40 13-52 (155)
329 3fim_B ARYL-alcohol oxidase; A 96.9 0.00047 1.6E-08 67.0 3.2 36 7-42 2-38 (566)
330 2xdo_A TETX2 protein; tetracyc 96.9 0.0039 1.3E-07 57.8 9.4 34 186-219 26-59 (398)
331 1gte_A Dihydropyrimidine dehyd 96.8 0.0069 2.3E-07 63.3 11.8 34 7-40 332-366 (1025)
332 3e1t_A Halogenase; flavoprotei 96.8 0.00082 2.8E-08 64.7 4.5 33 187-219 8-40 (512)
333 1gpe_A Protein (glucose oxidas 96.8 0.001 3.5E-08 65.1 5.2 35 7-41 24-59 (587)
334 1y56_B Sarcosine oxidase; dehy 96.8 0.0023 7.8E-08 58.9 7.3 33 187-219 6-38 (382)
335 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.0017 6E-08 54.6 5.8 37 183-219 28-64 (223)
336 1w4x_A Phenylacetone monooxyge 96.8 0.0024 8.4E-08 61.9 7.6 33 187-219 17-49 (542)
337 2qa1_A PGAE, polyketide oxygen 96.7 0.00021 7.3E-09 68.6 -0.5 35 186-220 11-45 (500)
338 2qa2_A CABE, polyketide oxygen 96.7 0.00019 6.4E-09 69.0 -0.9 35 186-220 12-46 (499)
339 2jbv_A Choline oxidase; alcoho 96.7 0.0012 4.1E-08 64.0 4.6 36 7-42 13-49 (546)
340 3dme_A Conserved exported prot 96.6 0.0019 6.5E-08 59.0 5.4 33 187-219 5-37 (369)
341 3atr_A Conserved archaeal prot 96.6 0.0041 1.4E-07 58.8 7.6 33 187-219 7-39 (453)
342 1ryi_A Glycine oxidase; flavop 96.5 0.002 6.8E-08 59.3 4.8 34 186-219 17-50 (382)
343 1d4d_A Flavocytochrome C fumar 96.4 0.0071 2.4E-07 59.0 8.2 34 186-219 126-159 (572)
344 3nyc_A D-arginine dehydrogenas 96.4 0.0027 9.3E-08 58.3 5.1 33 186-219 9-41 (381)
345 2gag_B Heterotetrameric sarcos 96.4 0.0036 1.2E-07 58.1 5.8 34 186-219 21-56 (405)
346 3cgv_A Geranylgeranyl reductas 96.4 0.00026 8.9E-09 65.7 -2.1 33 187-219 5-37 (397)
347 3fwz_A Inner membrane protein 96.3 0.006 2.1E-07 47.4 5.9 34 7-40 7-40 (140)
348 3llv_A Exopolyphosphatase-rela 96.3 0.0047 1.6E-07 48.0 5.1 34 7-40 6-39 (141)
349 3ps9_A TRNA 5-methylaminomethy 96.3 0.011 3.8E-07 58.9 8.8 34 186-219 272-305 (676)
350 4at0_A 3-ketosteroid-delta4-5a 96.3 0.016 5.5E-07 55.6 9.6 33 187-219 42-74 (510)
351 1y56_A Hypothetical protein PH 96.2 0.0021 7.2E-08 61.5 2.9 32 187-219 109-140 (493)
352 3ihg_A RDME; flavoenzyme, anth 96.2 0.0027 9.1E-08 61.5 3.7 34 186-219 5-38 (535)
353 3pvc_A TRNA 5-methylaminomethy 96.0 0.0051 1.7E-07 61.5 5.0 34 186-219 264-297 (689)
354 1lss_A TRK system potassium up 96.0 0.0078 2.7E-07 46.4 4.8 34 7-40 4-37 (140)
355 1id1_A Putative potassium chan 95.9 0.011 3.9E-07 46.5 5.7 34 7-40 3-36 (153)
356 2gmh_A Electron transfer flavo 95.9 0.0082 2.8E-07 58.7 5.8 33 187-219 36-74 (584)
357 1chu_A Protein (L-aspartate ox 95.8 0.041 1.4E-06 53.2 10.1 32 187-219 9-40 (540)
358 1pj5_A N,N-dimethylglycine oxi 95.8 0.01 3.4E-07 60.7 5.9 33 187-219 5-38 (830)
359 4b63_A L-ornithine N5 monooxyg 95.7 0.058 2E-06 51.5 10.8 34 7-40 246-281 (501)
360 3ado_A Lambda-crystallin; L-gu 95.7 0.011 3.9E-07 52.6 5.1 39 1-40 1-39 (319)
361 3ic5_A Putative saccharopine d 95.7 0.011 3.7E-07 44.0 4.4 34 7-40 5-39 (118)
362 2hmt_A YUAA protein; RCK, KTN, 95.6 0.014 4.7E-07 45.2 4.9 33 8-40 7-39 (144)
363 2wdq_A Succinate dehydrogenase 95.4 0.089 3E-06 51.4 11.0 33 187-219 8-40 (588)
364 2e5v_A L-aspartate oxidase; ar 95.4 0.034 1.2E-06 52.7 7.8 30 189-218 2-31 (472)
365 2dkh_A 3-hydroxybenzoate hydro 95.3 0.0056 1.9E-07 60.6 2.0 33 187-219 33-66 (639)
366 3kkj_A Amine oxidase, flavin-c 95.3 0.0082 2.8E-07 51.9 2.9 32 188-219 4-35 (336)
367 1kf6_A Fumarate reductase flav 95.3 0.16 5.6E-06 49.6 12.3 32 188-219 7-40 (602)
368 3c85_A Putative glutathione-re 95.0 0.03 1E-06 45.5 5.4 34 7-40 39-73 (183)
369 2dpo_A L-gulonate 3-dehydrogen 95.0 0.025 8.6E-07 50.5 5.1 39 1-40 1-39 (319)
370 3l4b_C TRKA K+ channel protien 95.0 0.021 7.3E-07 47.9 4.4 33 8-40 1-33 (218)
371 3g0o_A 3-hydroxyisobutyrate de 94.8 0.025 8.6E-07 50.2 4.7 40 1-40 1-40 (303)
372 3i83_A 2-dehydropantoate 2-red 94.6 0.035 1.2E-06 49.7 5.1 33 187-219 3-35 (320)
373 1pzg_A LDH, lactate dehydrogen 94.5 0.042 1.4E-06 49.4 5.3 34 7-40 9-43 (331)
374 3l6d_A Putative oxidoreductase 94.4 0.05 1.7E-06 48.3 5.7 35 6-40 8-42 (306)
375 3hn2_A 2-dehydropantoate 2-red 94.4 0.046 1.6E-06 48.7 5.4 33 187-219 3-35 (312)
376 1pjq_A CYSG, siroheme synthase 94.3 0.036 1.2E-06 52.2 4.7 36 184-219 10-45 (457)
377 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.053 1.8E-06 45.5 5.1 34 7-40 31-64 (223)
378 3hwr_A 2-dehydropantoate 2-red 94.3 0.033 1.1E-06 49.8 4.1 34 185-219 18-51 (318)
379 3i83_A 2-dehydropantoate 2-red 94.2 0.044 1.5E-06 49.0 4.8 33 8-40 3-35 (320)
380 4dgk_A Phytoene dehydrogenase; 94.2 0.018 6E-07 55.1 2.3 33 187-219 2-34 (501)
381 1f0y_A HCDH, L-3-hydroxyacyl-C 94.2 0.049 1.7E-06 48.2 5.0 33 8-40 16-48 (302)
382 2g1u_A Hypothetical protein TM 94.1 0.039 1.3E-06 43.5 3.8 38 182-219 15-52 (155)
383 4e12_A Diketoreductase; oxidor 94.1 0.058 2E-06 47.3 5.2 33 8-40 5-37 (283)
384 3k96_A Glycerol-3-phosphate de 94.0 0.057 1.9E-06 49.1 5.2 34 7-40 29-62 (356)
385 3ghy_A Ketopantoate reductase 94.0 0.058 2E-06 48.6 5.1 33 7-39 3-35 (335)
386 3lk7_A UDP-N-acetylmuramoylala 94.0 0.093 3.2E-06 49.4 6.7 36 184-219 7-42 (451)
387 3ktd_A Prephenate dehydrogenas 93.8 0.068 2.3E-06 48.1 5.3 40 1-40 2-41 (341)
388 1y6j_A L-lactate dehydrogenase 93.8 0.054 1.8E-06 48.4 4.5 35 6-40 6-42 (318)
389 3hn2_A 2-dehydropantoate 2-red 93.8 0.051 1.7E-06 48.4 4.4 33 8-40 3-35 (312)
390 1ks9_A KPA reductase;, 2-dehyd 93.7 0.061 2.1E-06 47.1 4.8 33 8-40 1-33 (291)
391 2a9f_A Putative malic enzyme ( 93.7 0.062 2.1E-06 48.8 4.6 34 7-40 188-222 (398)
392 3lk7_A UDP-N-acetylmuramoylala 93.7 0.068 2.3E-06 50.3 5.2 34 7-40 9-42 (451)
393 2raf_A Putative dinucleotide-b 93.6 0.071 2.4E-06 44.4 4.7 34 7-40 19-52 (209)
394 2ewd_A Lactate dehydrogenase,; 93.6 0.067 2.3E-06 47.7 4.9 34 7-40 4-38 (317)
395 3oz2_A Digeranylgeranylglycero 93.6 0.033 1.1E-06 51.1 2.9 32 188-219 6-37 (397)
396 1zej_A HBD-9, 3-hydroxyacyl-CO 93.6 0.065 2.2E-06 47.1 4.6 33 7-40 12-44 (293)
397 1kyq_A Met8P, siroheme biosynt 93.6 0.054 1.9E-06 47.0 4.0 34 7-40 13-46 (274)
398 3g17_A Similar to 2-dehydropan 93.5 0.065 2.2E-06 47.3 4.6 33 8-40 3-35 (294)
399 4dio_A NAD(P) transhydrogenase 93.5 0.076 2.6E-06 48.7 5.0 34 7-40 190-223 (405)
400 4g65_A TRK system potassium up 93.5 0.039 1.3E-06 52.0 3.3 34 7-40 3-36 (461)
401 2x5o_A UDP-N-acetylmuramoylala 93.5 0.058 2E-06 50.6 4.4 36 7-42 5-40 (439)
402 3eag_A UDP-N-acetylmuramate:L- 93.5 0.14 4.8E-06 45.8 6.8 34 186-219 4-38 (326)
403 1lld_A L-lactate dehydrogenase 93.5 0.07 2.4E-06 47.6 4.8 34 7-40 7-42 (319)
404 3pid_A UDP-glucose 6-dehydroge 93.5 0.067 2.3E-06 49.7 4.7 33 7-40 36-68 (432)
405 3ihm_A Styrene monooxygenase A 93.4 0.04 1.4E-06 51.5 3.1 34 186-219 22-55 (430)
406 2y0c_A BCEC, UDP-glucose dehyd 93.3 0.075 2.6E-06 50.4 4.7 34 7-40 8-41 (478)
407 3qha_A Putative oxidoreductase 93.3 0.073 2.5E-06 47.0 4.4 35 7-41 15-49 (296)
408 3g5s_A Methylenetetrahydrofola 93.2 0.047 1.6E-06 49.9 3.1 33 187-219 2-34 (443)
409 1kyq_A Met8P, siroheme biosynt 93.2 0.062 2.1E-06 46.6 3.7 36 184-219 11-46 (274)
410 1vl6_A Malate oxidoreductase; 93.1 0.085 2.9E-06 47.9 4.6 33 7-39 192-225 (388)
411 2ew2_A 2-dehydropantoate 2-red 93.1 0.083 2.8E-06 46.9 4.6 33 8-40 4-36 (316)
412 3dtt_A NADP oxidoreductase; st 93.1 0.1 3.4E-06 44.7 4.9 34 7-40 19-52 (245)
413 3p2y_A Alanine dehydrogenase/p 93.1 0.079 2.7E-06 48.2 4.4 34 7-40 184-217 (381)
414 3gg2_A Sugar dehydrogenase, UD 93.0 0.087 3E-06 49.5 4.7 33 8-40 3-35 (450)
415 3doj_A AT3G25530, dehydrogenas 93.0 0.099 3.4E-06 46.5 4.9 34 7-40 21-54 (310)
416 3oj0_A Glutr, glutamyl-tRNA re 93.0 0.051 1.8E-06 42.2 2.7 34 7-40 21-54 (144)
417 2vns_A Metalloreductase steap3 92.9 0.12 4.1E-06 43.2 5.1 34 7-40 28-61 (215)
418 1t2d_A LDH-P, L-lactate dehydr 92.9 0.11 3.8E-06 46.4 5.1 34 7-40 4-38 (322)
419 2aef_A Calcium-gated potassium 92.8 0.054 1.8E-06 46.0 2.8 34 6-40 8-41 (234)
420 3l9w_A Glutathione-regulated p 92.8 0.11 3.9E-06 48.1 5.1 34 7-40 4-37 (413)
421 3k6j_A Protein F01G10.3, confi 92.8 0.13 4.4E-06 48.2 5.4 33 8-40 55-87 (460)
422 2oln_A NIKD protein; flavoprot 92.7 0.072 2.5E-06 49.0 3.7 33 187-219 5-37 (397)
423 2hjr_A Malate dehydrogenase; m 92.6 0.13 4.3E-06 46.2 5.0 34 7-40 14-48 (328)
424 3ego_A Probable 2-dehydropanto 92.6 0.059 2E-06 47.9 2.9 32 187-219 3-34 (307)
425 1id1_A Putative potassium chan 92.6 0.11 3.7E-06 40.7 4.1 34 186-219 3-36 (153)
426 3vps_A TUNA, NAD-dependent epi 92.6 0.14 4.7E-06 45.4 5.3 41 1-41 1-42 (321)
427 3pef_A 6-phosphogluconate dehy 92.5 0.11 3.9E-06 45.5 4.6 33 8-40 2-34 (287)
428 3c4a_A Probable tryptophan hyd 92.5 0.068 2.3E-06 49.0 3.2 33 188-220 2-36 (381)
429 2qyt_A 2-dehydropantoate 2-red 92.5 0.074 2.5E-06 47.3 3.4 32 7-38 8-45 (317)
430 1jw9_B Molybdopterin biosynthe 92.5 0.11 3.7E-06 44.6 4.2 33 8-40 32-65 (249)
431 1bg6_A N-(1-D-carboxylethyl)-L 92.4 0.12 4.1E-06 46.9 4.7 34 7-40 4-37 (359)
432 1z82_A Glycerol-3-phosphate de 92.4 0.12 4.2E-06 46.4 4.8 34 7-40 14-47 (335)
433 3d1l_A Putative NADP oxidoredu 92.4 0.11 3.7E-06 45.0 4.2 34 7-40 10-44 (266)
434 3tl2_A Malate dehydrogenase; c 92.4 0.14 4.9E-06 45.4 5.0 33 7-39 8-41 (315)
435 3gpi_A NAD-dependent epimerase 92.3 0.17 5.8E-06 44.1 5.5 34 7-40 3-36 (286)
436 3g79_A NDP-N-acetyl-D-galactos 92.3 0.12 4E-06 48.9 4.5 35 7-41 18-54 (478)
437 2v6b_A L-LDH, L-lactate dehydr 92.3 0.13 4.4E-06 45.6 4.6 33 8-40 1-35 (304)
438 4dll_A 2-hydroxy-3-oxopropiona 92.2 0.13 4.4E-06 45.9 4.6 34 7-40 31-64 (320)
439 3c96_A Flavin-containing monoo 92.2 0.088 3E-06 48.8 3.6 34 187-220 5-39 (410)
440 3ego_A Probable 2-dehydropanto 92.2 0.13 4.5E-06 45.6 4.6 32 8-40 3-34 (307)
441 3mog_A Probable 3-hydroxybutyr 92.2 0.15 5.1E-06 48.3 5.1 34 7-40 5-38 (483)
442 2uzz_A N-methyl-L-tryptophan o 92.1 0.063 2.2E-06 48.9 2.5 33 187-219 3-35 (372)
443 4ffl_A PYLC; amino acid, biosy 92.1 0.15 5.3E-06 46.3 5.0 34 8-41 2-35 (363)
444 4a7p_A UDP-glucose dehydrogena 92.1 0.14 4.9E-06 47.9 4.8 35 7-41 8-42 (446)
445 2iid_A L-amino-acid oxidase; f 92.0 0.079 2.7E-06 50.5 3.2 34 186-219 33-66 (498)
446 2gf3_A MSOX, monomeric sarcosi 92.0 0.081 2.8E-06 48.5 3.1 33 187-219 4-36 (389)
447 3ka7_A Oxidoreductase; structu 92.0 0.076 2.6E-06 49.4 2.9 32 188-219 2-33 (425)
448 1jay_A Coenzyme F420H2:NADP+ o 92.0 0.16 5.5E-06 42.1 4.7 32 9-40 2-34 (212)
449 3ghy_A Ketopantoate reductase 92.0 0.11 3.7E-06 46.8 3.8 32 187-218 4-35 (335)
450 1zcj_A Peroxisomal bifunctiona 92.0 0.16 5.6E-06 47.8 5.2 34 7-40 37-70 (463)
451 3pdu_A 3-hydroxyisobutyrate de 91.9 0.12 4.2E-06 45.2 4.0 33 8-40 2-34 (287)
452 1x13_A NAD(P) transhydrogenase 91.9 0.15 5.1E-06 47.1 4.7 34 7-40 172-205 (401)
453 1c0p_A D-amino acid oxidase; a 91.8 0.11 3.7E-06 47.2 3.7 34 186-219 6-39 (363)
454 3ius_A Uncharacterized conserv 91.8 0.16 5.5E-06 44.2 4.7 34 7-40 5-38 (286)
455 2uyy_A N-PAC protein; long-cha 91.7 0.21 7.3E-06 44.4 5.5 34 7-40 30-63 (316)
456 1ldn_A L-lactate dehydrogenase 91.7 0.18 6.2E-06 44.9 5.0 39 1-40 1-41 (316)
457 4huj_A Uncharacterized protein 91.7 0.092 3.1E-06 44.1 2.8 34 7-40 23-57 (220)
458 1mv8_A GMD, GDP-mannose 6-dehy 91.7 0.13 4.4E-06 48.1 4.1 33 8-40 1-33 (436)
459 2zyd_A 6-phosphogluconate dehy 91.6 0.17 5.7E-06 48.0 4.8 34 7-40 15-48 (480)
460 3hwr_A 2-dehydropantoate 2-red 91.6 0.17 5.7E-06 45.2 4.6 33 7-40 19-51 (318)
461 1txg_A Glycerol-3-phosphate de 91.6 0.14 4.9E-06 45.9 4.2 31 8-38 1-31 (335)
462 1l7d_A Nicotinamide nucleotide 91.6 0.18 6.3E-06 46.2 5.0 34 7-40 172-205 (384)
463 3gvi_A Malate dehydrogenase; N 91.6 0.2 6.8E-06 44.7 5.0 34 7-40 7-41 (324)
464 3qsg_A NAD-binding phosphogluc 91.5 0.15 5.1E-06 45.3 4.2 33 7-39 24-57 (312)
465 3pqe_A L-LDH, L-lactate dehydr 91.5 0.18 6.2E-06 45.0 4.7 34 7-40 5-40 (326)
466 2h78_A Hibadh, 3-hydroxyisobut 91.5 0.16 5.3E-06 44.9 4.3 34 7-40 3-36 (302)
467 3eag_A UDP-N-acetylmuramate:L- 91.5 0.2 6.9E-06 44.8 5.0 34 7-40 4-38 (326)
468 3fwz_A Inner membrane protein 91.4 0.12 4.1E-06 39.8 3.0 34 186-219 7-40 (140)
469 3dje_A Fructosyl amine: oxygen 91.3 0.12 4E-06 48.3 3.5 34 186-219 6-40 (438)
470 3vtf_A UDP-glucose 6-dehydroge 91.3 0.21 7.1E-06 46.5 5.0 34 7-40 21-54 (444)
471 3phh_A Shikimate dehydrogenase 91.2 0.23 7.9E-06 42.9 4.9 34 7-40 118-151 (269)
472 1guz_A Malate dehydrogenase; o 91.2 0.2 6.9E-06 44.4 4.7 33 8-40 1-35 (310)
473 4ezb_A Uncharacterized conserv 91.2 0.18 6.2E-06 44.9 4.4 34 7-40 24-58 (317)
474 3p7m_A Malate dehydrogenase; p 91.2 0.24 8.3E-06 44.1 5.1 34 7-40 5-39 (321)
475 1a5z_A L-lactate dehydrogenase 91.1 0.17 6E-06 45.1 4.2 33 8-40 1-35 (319)
476 3c24_A Putative oxidoreductase 91.1 0.25 8.5E-06 43.2 5.2 33 8-40 12-45 (286)
477 3ew7_A LMO0794 protein; Q8Y8U8 91.1 0.24 8.1E-06 41.1 4.8 33 8-40 1-34 (221)
478 3d0o_A L-LDH 1, L-lactate dehy 91.1 0.2 7E-06 44.6 4.6 33 7-39 6-40 (317)
479 3ius_A Uncharacterized conserv 91.0 0.22 7.4E-06 43.4 4.7 34 186-219 5-38 (286)
480 3g3e_A D-amino-acid oxidase; F 91.0 0.14 4.8E-06 46.2 3.6 32 188-219 2-39 (351)
481 2r6j_A Eugenol synthase 1; phe 91.0 0.25 8.5E-06 43.8 5.1 40 1-40 5-45 (318)
482 2b9w_A Putative aminooxidase; 91.0 0.12 4.3E-06 47.9 3.2 34 186-219 6-40 (424)
483 4e21_A 6-phosphogluconate dehy 90.9 0.22 7.6E-06 45.1 4.7 34 7-40 22-55 (358)
484 2f1k_A Prephenate dehydrogenas 90.9 0.22 7.5E-06 43.4 4.6 33 8-40 1-33 (279)
485 3tri_A Pyrroline-5-carboxylate 90.9 0.25 8.7E-06 43.1 5.0 34 7-40 3-39 (280)
486 1pjc_A Protein (L-alanine dehy 90.9 0.25 8.4E-06 44.9 5.1 34 7-40 167-200 (361)
487 3nks_A Protoporphyrinogen oxid 90.9 0.11 3.7E-06 49.1 2.8 33 187-219 3-37 (477)
488 3llv_A Exopolyphosphatase-rela 90.9 0.14 4.7E-06 39.4 2.9 34 186-219 6-39 (141)
489 3dfu_A Uncharacterized protein 90.8 0.068 2.3E-06 45.1 1.2 33 7-39 6-38 (232)
490 3cky_A 2-hydroxymethyl glutara 90.8 0.2 6.9E-06 44.1 4.3 34 7-40 4-37 (301)
491 1ur5_A Malate dehydrogenase; o 90.8 0.25 8.4E-06 43.9 4.9 33 8-40 3-36 (309)
492 2e1m_A L-glutamate oxidase; L- 90.8 0.13 4.6E-06 46.9 3.2 34 185-218 43-76 (376)
493 2gf2_A Hibadh, 3-hydroxyisobut 90.8 0.22 7.6E-06 43.7 4.6 32 9-40 2-33 (296)
494 2rcy_A Pyrroline carboxylate r 90.8 0.22 7.5E-06 42.8 4.4 35 7-41 4-42 (262)
495 1nyt_A Shikimate 5-dehydrogena 90.8 0.26 8.8E-06 42.8 4.9 34 7-40 119-152 (271)
496 2i6t_A Ubiquitin-conjugating e 90.7 0.22 7.4E-06 44.1 4.4 34 7-40 14-49 (303)
497 3ic5_A Putative saccharopine d 90.7 0.12 4E-06 38.1 2.3 34 186-219 5-39 (118)
498 1dlj_A UDP-glucose dehydrogena 90.7 0.19 6.5E-06 46.4 4.2 32 8-40 1-32 (402)
499 1evy_A Glycerol-3-phosphate de 90.7 0.16 5.6E-06 46.2 3.7 32 9-40 17-48 (366)
500 1hdo_A Biliverdin IX beta redu 90.7 0.3 1E-05 40.0 5.0 33 8-40 4-37 (206)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.1e-41 Score=315.06 Aligned_cols=340 Identities=21% Similarity=0.360 Sum_probs=264.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|+++|++|+|+|+.+..||.|.. .|+.+.+..+...+.++.++.+.+...++++.++.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999985 5788888888887777777777776778899999999
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceE-EEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+.+.++++++.+ +++++|++++.++ +.|. |++.+ .+++||+||+|+|.++.|..|.++|.+.+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~---------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG---------RQWLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS---------CEEEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC---------CEEEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999998876 9999999999876 6787 77654 57899999999998778889999999887
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhh--HHHHHHhhcCChhhH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV--YLGLVLLRYVPCGGV 243 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~--~~~~~~~~~~~~~~~ 243 (396)
.+..++...+.....+.+++++|||+|.+|+|+|..|++.+ +|+++.|++...+|.... .+...+.+.+...
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 219 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQ-- 219 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhcc--
Confidence 77888888888877778999999999999999999999998 699999996566665522 1111111110000
Q ss_pred HHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccCceeEECCeEEecCCcEEeCcEE
Q 016069 244 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSI 323 (396)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~v~~~~~~~v~~~~g~~~~~D~v 323 (396)
.. ..+... .......+.....+.+.++.+.+.....+.+++.+++.++||+++++|.|
T Consensus 220 ------~~---------~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~v 277 (357)
T 4a9w_A 220 ------QE---------GREPDL-------PPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAV 277 (357)
T ss_dssp ------------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEE
T ss_pred ------cc---------ccCCCc-------ccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEE
Confidence 00 000000 00000123344445566666666665558999999999999999999999
Q ss_pred EECCCCCCCcccccccCCCCCCCCCCCcCCCCC-CCccCCCceEEEe--ccccc----ccCchHHHHHHHHHHhhhcC
Q 016069 324 VFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYP-NHWKGKNGLYCVG--LSRKG----LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 324 i~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~vya~G--d~~~~----~~~a~~~a~~~a~~i~~~l~ 394 (396)
|+|||++|+++ ++. . ..+.+++|++.++.. .+.++.|+|||+| |++.. ...|..+|+.+|++|.+.|.
T Consensus 278 i~a~G~~p~~~-~l~-~-~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 278 IWCTGFRPALS-HLK-G-LDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp EECCCBCCCCG-GGT-T-TTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred EECCCcCCCCc-ccC-c-ccccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999985 444 3 334488899988855 4789999999999 55542 44899999999999999885
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=5e-41 Score=322.19 Aligned_cols=311 Identities=19% Similarity=0.354 Sum_probs=244.9
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCC---eEEEecCCCCCcccccC---------------CcCceeeccccccccCC
Q 016069 8 VEVIIVGAGPSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~---~g~~---v~lie~~~~~gg~~~~~---------------~~~~~~~~~~~~~~~~~ 66 (396)
+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||+|... .|+.+..+.+...+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999753 34455555555555555
Q ss_pred CCCCCC----CCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEE
Q 016069 67 HLPFPS----SYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (396)
Q Consensus 67 ~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vv 142 (396)
.++++. +...++++.++.+|+.++++++++..+++++++|++++..++.+.|.|++.++.+ |.. .++.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~-g~~--~~~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT-DTI--YSEEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC-Cce--EEEEcCEEE
Confidence 544332 1255788999999999999999987556899999999987644589999876322 222 578999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCcee
Q 016069 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHV 222 (396)
Q Consensus 143 iAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~ 222 (396)
+|||.++.|+.|.++|.+.+ .+..+|+..+.+...+.+++|+|||+|.+|+|+|..|++.|.+|+++.|++. +
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~-~ 232 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA-P 232 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC-C
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC-C
Confidence 99999889999999999888 7888999988877777799999999999999999999999999999998872 1
Q ss_pred eehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccCc
Q 016069 223 LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGI 302 (396)
Q Consensus 223 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~v 302 (396)
++.. -..+|+++..|
T Consensus 233 ~~~~-----------------------------------------------------------------~~~~V~~~~~V 247 (464)
T 2xve_A 233 MGYK-----------------------------------------------------------------WPENWDERPNL 247 (464)
T ss_dssp CCCC-----------------------------------------------------------------CCTTEEECSCE
T ss_pred CCCC-----------------------------------------------------------------CCCceEEcCCe
Confidence 1000 01477777668
Q ss_pred eeEECCeEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCC-CCCCccCCCceEEEeccccc--ccCch
Q 016069 303 ESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQS-YPNHWKGKNGLYCVGLSRKG--LYGAA 379 (396)
Q Consensus 303 ~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vya~Gd~~~~--~~~a~ 379 (396)
+++++++|.++||+++++|.||+|||++|+++.+.. ..+...++++.+... .....++.|+|||+||+... ...|.
T Consensus 248 ~~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~-~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~ 326 (464)
T 2xve_A 248 VRVDTENAYFADGSSEKVDAIILCTGYIHHFPFLND-DLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFD 326 (464)
T ss_dssp EEECSSEEEETTSCEEECSEEEECCCBCCCCTTBCT-TTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHH
T ss_pred EEEeCCEEEECCCCEEeCCEEEECCCCCCCCCCcCc-ccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHH
Confidence 899888999999999999999999999999865433 222233444454211 11245789999999999765 33788
Q ss_pred HHHHHHHHHHhhhcC
Q 016069 380 ADAQNIADHINSILS 394 (396)
Q Consensus 380 ~~a~~~a~~i~~~l~ 394 (396)
.||+++|++|.+.+.
T Consensus 327 ~qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 327 AQAWYARDVIMGRLP 341 (464)
T ss_dssp HHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999988654
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=2e-41 Score=329.45 Aligned_cols=361 Identities=20% Similarity=0.349 Sum_probs=273.1
Q ss_pred CCeEEEECCChHHHHHHHHHH-hcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCC----CCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~-~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|+ +.|++|+|+|+.+.+||+|..+.|++..++.+...+.+...+ ...+...+..+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 899999999999999999999999999999988777665321 123444577899
Q ss_pred HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc
Q 016069 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (396)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~ 161 (396)
++.+|+.+.++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|+|.++.|..|.++|.+.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--------EVYRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--------CEEEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--------CEEEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999866679999999999987556899999875 5789999999999988999999999998
Q ss_pred cccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCC--
Q 016069 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP-- 239 (396)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~-- 239 (396)
+ .+..+|+..+.......+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+.+|..+..+.......+.
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~ 233 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKAD 233 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHT
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhc
Confidence 8 88899999888777778999999999999999999999999999999999988998765533332211110
Q ss_pred --hh--------------------------h-HHHHH------------------------------HHHHH---HHhcc
Q 016069 240 --CG--------------------------G-VDTLM------------------------------VMLSR---LVYGD 257 (396)
Q Consensus 240 --~~--------------------------~-~~~~~------------------------------~~~~~---~~~~~ 257 (396)
.. . ...+. ..+.. ....+
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d 313 (540)
T 3gwf_A 234 YDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIED 313 (540)
T ss_dssp HHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 00 0 00000 00000 00111
Q ss_pred ccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEc---cC-ceeEECCeEEecCCcEEeCcEEEECCCCCCCc
Q 016069 258 LSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRST 333 (396)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~ 333 (396)
......-.|. ...++++..+..+.+.+.+.+|+++ .. |+++++++|+++||+++++|+||+|||+++++
T Consensus 314 p~~~~~l~P~-------~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 314 PETARKLMPK-------GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp HHHHHHHCCC-------SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS
T ss_pred HHHHHhCCCC-------CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc
Confidence 1111111111 3446778889999999999999999 45 99999999999999999999999999999986
Q ss_pred ccccccCCCCCCCCCCC---------cCCCCCCCccCCCceEEE-ecccc---cccCchHHHHHHHHHHhh
Q 016069 334 NVWLKQGDDSMLNDDGI---------PKQSYPNHWKGKNGLYCV-GLSRK---GLYGAAADAQNIADHINS 391 (396)
Q Consensus 334 ~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~vya~-Gd~~~---~~~~a~~~a~~~a~~i~~ 391 (396)
..+.. ..+...+|. +..-......+.||+|++ |+.+. .+..+..|++++++.|..
T Consensus 387 ~~~~~---~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 387 GNYRR---IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp HHHHT---SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHH
T ss_pred cCcCc---ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 32222 112222222 222212344678999999 87543 244777888888887754
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=4.7e-41 Score=327.27 Aligned_cols=363 Identities=19% Similarity=0.289 Sum_probs=264.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCC----CCCCCCCCCHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (396)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+||+|..+.|++..++.+...+.+...+. ..+...+.+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35799999999999999999999999999999999999999999999999998877766543221 23445678999
Q ss_pred HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc
Q 016069 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (396)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~ 161 (396)
++.+|+.+.++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|+|.++.|+.|.+||.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--------EVVTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--------EEEEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999866779999999999887667899999875 6799999999999988999999999999
Q ss_pred cccCCCCCcceeeccCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHH
Q 016069 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (396)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (396)
+ .+..+|+..+... ....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+.+|..+..+....
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 233 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEK 233 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHH
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHH
Confidence 8 8889999887665 56678999999999999999999999999999999999888887654322221
Q ss_pred hhcC----Chh---------------------------hHHHHHHHH-------------------------HHHHhccc
Q 016069 235 LRYV----PCG---------------------------GVDTLMVML-------------------------SRLVYGDL 258 (396)
Q Consensus 235 ~~~~----~~~---------------------------~~~~~~~~~-------------------------~~~~~~~~ 258 (396)
...+ |.. ....+...+ ...+....
T Consensus 234 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (545)
T 3uox_A 234 MDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI 313 (545)
T ss_dssp HHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 1111 000 000000000 00000000
Q ss_pred cccCcCCCCCCcchh-------hhccCCccccCchhhhhhcCCCeEEc---cC-ceeEECCeEEecCCcEEeCcEEEECC
Q 016069 259 SKYGIHKPREGPFFM-------KAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCT 327 (396)
Q Consensus 259 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~---~~-v~~~~~~~v~~~~g~~~~~D~vi~at 327 (396)
+..+. .+... ....++.+..+..+.+.+.+.+|+++ .. |+++++++|.++|| ++++|+||+||
T Consensus 314 -~~~v~----d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~AT 387 (545)
T 3uox_A 314 -RQRVK----DPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYAT 387 (545)
T ss_dssp -HHHCS----CHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECC
T ss_pred -HHHcC----CHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECC
Confidence 00000 11111 11234567788899999999999998 45 99999999999999 99999999999
Q ss_pred CCCCCcccccccCCCCCCCCCCCcCCC---------CCCCccCCCceEEE-ecccc-----cccCchHHHHHHHHHHhh
Q 016069 328 GFKRSTNVWLKQGDDSMLNDDGIPKQS---------YPNHWKGKNGLYCV-GLSRK-----GLYGAAADAQNIADHINS 391 (396)
Q Consensus 328 G~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~vya~-Gd~~~-----~~~~a~~~a~~~a~~i~~ 391 (396)
|+.+++..+.. ..+...+|....+ ......+.||+|++ |..+. .+..+..|++++++.|..
T Consensus 388 Gf~~~~~~~~~---~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 463 (545)
T 3uox_A 388 GFDAVTGSLDR---IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISY 463 (545)
T ss_dssp CCBSSSCSCTT---SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCC---ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 99987533322 2233334432211 11234578999997 44332 244677888888887754
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=4.9e-40 Score=320.32 Aligned_cols=362 Identities=22% Similarity=0.322 Sum_probs=268.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCC----CCCCCCCCCCHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (396)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||+|..+.|++..++++..++.+...+ ...+...+.++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999999999999999998877765331 2234456789999
Q ss_pred HHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016069 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (396)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~ 162 (396)
+.+|+.+.++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|||.++.|..|.++|.+.+
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--------DEVSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999866679999999999987667899999875 57999999999998889999999999998
Q ss_pred ccCCCCCcceeeccCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCCh-
Q 016069 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPC- 240 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~- 240 (396)
.+..+|+..+. ....+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+.+|..+..+.......+..
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~ 246 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKAN 246 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHT
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhc
Confidence 88899999887 5666779999999999999999999999999999999999989998765444333222110
Q ss_pred --hhH----------------------------HHHHHHH------------------------HHHHhccccccCcCCC
Q 016069 241 --GGV----------------------------DTLMVML------------------------SRLVYGDLSKYGIHKP 266 (396)
Q Consensus 241 --~~~----------------------------~~~~~~~------------------------~~~~~~~~~~~~~~~~ 266 (396)
... ..+...+ ...+.... +..+
T Consensus 247 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v--- 322 (549)
T 4ap3_A 247 YAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKI-RAVV--- 322 (549)
T ss_dssp HHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHH-HHHC---
T ss_pred cHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHH-HHHc---
Confidence 000 0000000 00000000 0000
Q ss_pred CCCcchh-------hhccCCccccCchhhhhhcCCCeEEc---cC-ceeEECCeEEecCCcEEeCcEEEECCCCCCCccc
Q 016069 267 REGPFFM-------KAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNV 335 (396)
Q Consensus 267 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~ 335 (396)
..+... ....++.+..+..+.+.+.+.+|+++ .. |+++++++|.++|| ++++|+||+|||+++++..
T Consensus 323 -~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~~ 400 (549)
T 4ap3_A 323 -DDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTGS 400 (549)
T ss_dssp -SCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESSTT
T ss_pred -CCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccccc
Confidence 011111 12234567778899999999999998 66 99999999999999 9999999999999987632
Q ss_pred ccccCCCCCCCCCCCc---------CCCCCCCccCCCceEEE-ecccc-----cccCchHHHHHHHHHHhh
Q 016069 336 WLKQGDDSMLNDDGIP---------KQSYPNHWKGKNGLYCV-GLSRK-----GLYGAAADAQNIADHINS 391 (396)
Q Consensus 336 ~~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~vya~-Gd~~~-----~~~~a~~~a~~~a~~i~~ 391 (396)
+.. ..+...+|.. ..-......+.||+|++ |..+. .+..+..|++++++.|..
T Consensus 401 ~~~---~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 401 LDK---LEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp GGG---SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCc---eeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 222 1122233322 11111234578999997 66532 244777888888887754
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=3.6e-40 Score=322.42 Aligned_cols=364 Identities=21% Similarity=0.324 Sum_probs=268.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCC----CCCCCCCCCHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRAQ 82 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 82 (396)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||+|..+.|++..++.+...+.+...+. ..+...++++.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 5799999999999999999999999999999999999999999999998887776655442210 123345788999
Q ss_pred HHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016069 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (396)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~ 162 (396)
+.+|+..+++++++..+++++++|++++.+++.+.|.|++.++ .++++|+||+|+|.++.|..|.++|++.+
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~~f 167 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQLSVPQLPNFPGLKDF 167 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSCCCCCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999988777779999999999876556899998765 57899999999999889999999999988
Q ss_pred ccCCCCCcceeeccCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHH----HHHhhc
Q 016069 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLG----LVLLRY 237 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~----~~~~~~ 237 (396)
.|..+|+..+. +..++.+++++|||+|.+|+|++..++..+.+|+++.|++.+.+|..+.... ..+.+.
T Consensus 168 ------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~ 241 (542)
T 1w4x_A 168 ------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKR 241 (542)
T ss_dssp ------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTT
T ss_pred ------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhh
Confidence 88889998876 4355679999999999999999999999999999999999887776442111 111111
Q ss_pred CCh--------------------------hhHHHHHH-HH----------------------------HHH---Hhcccc
Q 016069 238 VPC--------------------------GGVDTLMV-ML----------------------------SRL---VYGDLS 259 (396)
Q Consensus 238 ~~~--------------------------~~~~~~~~-~~----------------------------~~~---~~~~~~ 259 (396)
+|. .....+.. .+ ... ...+..
T Consensus 242 ~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (542)
T 1w4x_A 242 YAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPE 321 (542)
T ss_dssp HHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHH
T ss_pred CHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHH
Confidence 110 00000000 00 000 001111
Q ss_pred ccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEc---cC-ceeEECCeEEecCCcEEeCcEEEECCCCCCCccc
Q 016069 260 KYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNV 335 (396)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~ 335 (396)
....-.|. .....++.+..+.++.+.+.+.+|+++ .. |+++++++|.++| +++++|+||+|||+.+++..
T Consensus 322 ~~~~l~P~-----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~~ 395 (542)
T 1w4x_A 322 VAERLVPK-----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGA 395 (542)
T ss_dssp HHHHHSCC-----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTHH
T ss_pred HHHhcCCC-----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccccC
Confidence 00000110 122345678889999999999999997 44 9999999999999 99999999999999997643
Q ss_pred ccccCCCCCCCCCCCcCCC---------CCCCccCCCceEEE-eccccc-----ccCchHHHHHHHHHHhhhc
Q 016069 336 WLKQGDDSMLNDDGIPKQS---------YPNHWKGKNGLYCV-GLSRKG-----LYGAAADAQNIADHINSIL 393 (396)
Q Consensus 336 ~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~vya~-Gd~~~~-----~~~a~~~a~~~a~~i~~~l 393 (396)
+.. ..+...+|....+ ......+.||+|++ |+.+.. +..+..|+++++++|....
T Consensus 396 ~~~---~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 396 LFK---IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp HHT---SEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCc---eeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 322 2223334443321 11334578999998 998532 3478899999999997654
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=2.5e-38 Score=302.93 Aligned_cols=309 Identities=23% Similarity=0.362 Sum_probs=233.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCcccccCCc---------------------------------
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSY--------------------------------- 51 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~--------------------------------- 51 (396)
.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.....
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5899999999999999999999999 99999999999999975421
Q ss_pred CceeeccccccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCc-
Q 016069 52 DRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR- 130 (396)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~- 130 (396)
+.+..+.+..++.+..++++.....++++.++.+|+.+++++++.. ++++++|++++... +.|.|++.+..+ |+
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--i~~~t~V~~v~~~~--~~~~V~~~~~~~-G~~ 160 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPF--IKLATDVLDIEKKD--GSWVVTYKGTKA-GSP 160 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGG--EECSEEEEEEEEET--TEEEEEEEESST-TCC
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCe--EEeCCEEEEEEeCC--CeEEEEEeecCC-CCe
Confidence 1222233333444555555555567788999999999999887544 48999999998865 679998876211 11
Q ss_pred eeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcC
Q 016069 131 VIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAA 210 (396)
Q Consensus 131 ~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~ 210 (396)
. .++.||+||+|||.++.|++|.++|.+.+.. ...+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+.
T Consensus 161 ~--~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~--~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 161 I--SKDIFDAVSICNGHYEVPYIPNIKGLDEYAK--AVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp E--EEEEESEEEECCCSSSSBCBCCCBTHHHHHH--HSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred e--EEEEeCEEEECCCCCCCCCCCCCCChhhhhc--cCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 1 4799999999999888999999999765300 00345788888877777789999999999999999999999999
Q ss_pred c-eEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhh
Q 016069 211 K-TSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCE 289 (396)
Q Consensus 211 ~-v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (396)
+ |+++.|++.+
T Consensus 237 ~~V~l~~r~~~~-------------------------------------------------------------------- 248 (447)
T 2gv8_A 237 HPIYQSLLGGGD-------------------------------------------------------------------- 248 (447)
T ss_dssp SSEEEECTTCCS--------------------------------------------------------------------
T ss_pred CcEEEEeCCCCc--------------------------------------------------------------------
Confidence 9 9999988721
Q ss_pred hhcCCCeEEccCceeEE--CCeEEecCCcE-EeCcEEEECCCCCCCcccc----cccCCCCCCCCCCCcCCCCCCC--cc
Q 016069 290 KIKSGQIQVLPGIESIR--GNEVIFENGHS-HHFDSIVFCTGFKRSTNVW----LKQGDDSMLNDDGIPKQSYPNH--WK 360 (396)
Q Consensus 290 ~~~~~~i~v~~~v~~~~--~~~v~~~~g~~-~~~D~vi~atG~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~--~~ 360 (396)
++..+|++...|+++. ..+|.++||+. +++|.||+|||++|+++.+ ++ .....+..++..+++.... .+
T Consensus 249 -l~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~-~~~~~i~~~~~~~~~~~~~v~~~ 326 (447)
T 2gv8_A 249 -IQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK-SPETKLIDDGSHVHNVYQHIFYI 326 (447)
T ss_dssp -CBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC-STTTCCCSSSSSCCSEETTTEET
T ss_pred -CCCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccc-cccCceecCCCcccccccccccC
Confidence 2335677655588884 34799999987 6999999999999998651 33 2111222345544432222 26
Q ss_pred CCCceEEEeccccc--ccCchHHHHHHHHHHhhhcC
Q 016069 361 GKNGLYCVGLSRKG--LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 361 ~~~~vya~Gd~~~~--~~~a~~~a~~~a~~i~~~l~ 394 (396)
+.|+||++||+... ...|..||+++|++|.+.+.
T Consensus 327 ~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~ 362 (447)
T 2gv8_A 327 PDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLK 362 (447)
T ss_dssp TCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred CCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCC
Confidence 88999999999765 33788999999999988664
No 8
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=3.5e-37 Score=283.80 Aligned_cols=298 Identities=17% Similarity=0.307 Sum_probs=227.8
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCH
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (396)
|......+||+|||||++|+++|..|++.|++|+|+|+.+..||.|.. .++...+. .++.++ ....
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~------~~~~~~-------~~~~ 66 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY------DVAGFP-------KIRA 66 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC------CSTTCS-------SEEH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe------ccCCCC-------CCCH
Confidence 443333579999999999999999999999999999999999998853 23322211 111111 1357
Q ss_pred HHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCCc
Q 016069 81 AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRGL 159 (396)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s-~p~~~~~~g~ 159 (396)
.++..++.+.++++++.+ +++++|++++... .+.|.|.+.+ .++.||+||+|||..+ .|..|.++|.
T Consensus 67 ~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~~d~vVlAtG~~~~~p~~~~~~g~ 134 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTI--CLEQAVESVEKQA-DGVFKLVTNE---------ETHYSKTVIITAGNGAFKPRKLELENA 134 (332)
T ss_dssp HHHHHHHHHHHTTSCCEE--ECSCCEEEEEECT-TSCEEEEESS---------EEEEEEEEEECCTTSCCEECCCCCTTG
T ss_pred HHHHHHHHHHHHHhCCcE--EccCEEEEEEECC-CCcEEEEECC---------CEEEeCEEEECCCCCcCCCCCCCCCCh
Confidence 889999999988887665 8899999999875 2478898876 3499999999999533 7888889998
Q ss_pred cccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCC
Q 016069 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP 239 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~ 239 (396)
+.+ .+..++. .+.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.+.+. +.+...
T Consensus 135 ~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~-~~~~~~------------ 194 (332)
T 3lzw_A 135 EQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK-FRAHEH------------ 194 (332)
T ss_dssp GGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS-CSSCHH------------
T ss_pred hhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc-CCccHH------------
Confidence 876 5555666 55555666789999999999999999999999999999998873 211110
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe----EEec
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----VIFE 313 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~----v~~~ 313 (396)
..+.+++.+|+++.+ +.+++.+. +.++
T Consensus 195 -----------------------------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~ 227 (332)
T 3lzw_A 195 -----------------------------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLE 227 (332)
T ss_dssp -----------------------------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEE
T ss_pred -----------------------------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEE
Confidence 123456678999887 88887653 7777
Q ss_pred C-----CcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc---c---ccCchHHH
Q 016069 314 N-----GHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK---G---LYGAAADA 382 (396)
Q Consensus 314 ~-----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~---~---~~~a~~~a 382 (396)
+ ++++++|.||+|+|++|+.+. ++ ...... ++|++.+|. ...++.|+|||+|||+. . ...|..||
T Consensus 228 ~~~~g~~~~~~~D~vv~a~G~~p~~~~-~~-~~~~~~-~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g 303 (332)
T 3lzw_A 228 EVKGDRKEILEIDDLIVNYGFVSSLGP-IK-NWGLDI-EKNSIVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEA 303 (332)
T ss_dssp ETTSCCEEEEECSEEEECCCEECCCGG-GG-GSSCCE-ETTEEECCT-TSBCSSTTEEECGGGEECTTCCCCHHHHHHHH
T ss_pred ecCCCceEEEECCEEEEeeccCCCchH-Hh-hcCccc-cCCeEEeCC-CCceecCCEEEccceecCCCCcceEeeehhhH
Confidence 6 467899999999999999854 44 312223 678888874 56678999999999973 2 33788999
Q ss_pred HHHHHHHhhhcCC
Q 016069 383 QNIADHINSILSP 395 (396)
Q Consensus 383 ~~~a~~i~~~l~~ 395 (396)
+.+|.+|.+.+.+
T Consensus 304 ~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 304 PTAVNNAKAYMDP 316 (332)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhCh
Confidence 9999999988753
No 9
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.4e-36 Score=280.48 Aligned_cols=292 Identities=15% Similarity=0.218 Sum_probs=222.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecC----CCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERE----NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~----~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (396)
++||+|||||++|+++|..|++.|++|+|+|+. ...||.|.... ....++ ..+.+....+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCCHHH
Confidence 589999999999999999999999999999994 47788776431 011111 1122456789
Q ss_pred HHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016069 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (396)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~ 162 (396)
+..++.+.++++++++ ++++ |++++.+. +.|.+.+..... . ..+.+|+||+|+| +.|..|.++|.+.+
T Consensus 86 ~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~--~---~~~~~d~vvlAtG--~~~~~~~~~g~~~~ 153 (338)
T 3itj_A 86 LMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNED--A---EPVTTDAIILATG--ASAKRMHLPGEETY 153 (338)
T ss_dssp HHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSS--S---CCEEEEEEEECCC--EEECCCCCTTHHHH
T ss_pred HHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCC--C---cEEEeCEEEECcC--CCcCCCCCCCchhc
Confidence 9999999999998775 7777 99998765 778777742110 1 5689999999999 67888889988765
Q ss_pred ccCCCCCcceeeccCCCCCC--CCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCCh
Q 016069 163 CSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPC 240 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (396)
.+..++........ ...+++++|||+|.+|+|+|..|.+.+.+|+++.+.+. .++
T Consensus 154 ------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~-~~~---------------- 210 (338)
T 3itj_A 154 ------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH-LRA---------------- 210 (338)
T ss_dssp ------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCS----------------
T ss_pred ------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc-cCC----------------
Confidence 44445544433322 45689999999999999999999999999999999883 211
Q ss_pred hhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhc-CCCeEEccC--ceeEECCe-----EEe
Q 016069 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRGNE-----VIF 312 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~~~--v~~~~~~~-----v~~ 312 (396)
...+.+.+. ..+|+++.+ +++++.++ |.+
T Consensus 211 -------------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 211 -------------------------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp -------------------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred -------------------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 011123443 359999987 88887653 777
Q ss_pred cC-----CcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHH
Q 016069 313 EN-----GHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQ 383 (396)
Q Consensus 313 ~~-----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~ 383 (396)
++ ++++++|.||+|+|+.|+.. ++. . ...++++|++.+++..+.++.|+|||+|||+.. ...|..+|+
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~-~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~ 324 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHTPATK-IVA-G-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGC 324 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEEECCG-GGB-T-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHH
T ss_pred EECCCCceEEEEeCEEEEEeCCCCChh-Hhh-C-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhH
Confidence 76 46789999999999999984 445 3 445678999987657778899999999999864 348899999
Q ss_pred HHHHHHhhhcCC
Q 016069 384 NIADHINSILSP 395 (396)
Q Consensus 384 ~~a~~i~~~l~~ 395 (396)
.+|.+|.+.|..
T Consensus 325 ~aa~~i~~~l~~ 336 (338)
T 3itj_A 325 MAALDAEKYLTS 336 (338)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999998864
No 10
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7.4e-36 Score=274.23 Aligned_cols=287 Identities=19% Similarity=0.280 Sum_probs=214.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|+|+. ..||.|.... .+..++.+ +...+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~------~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSE----------EVENFPGF------PEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC------SSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccc----------ccccCCCC------CCCCCHHHHHHH
Confidence 579999999999999999999999999999998 6788765321 00011111 112467788899
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEc--CCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYD--EATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
+.+.++++++.. +. .+|++++.. + ...|.|.+.++ .+++||+||+||| +.|..|.++|.+.+
T Consensus 71 l~~~~~~~gv~~--~~-~~v~~i~~~~~~-~~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~i~g~~~~-- 134 (325)
T 2q7v_A 71 MHQQAEKFGAKV--EM-DEVQGVQHDATS-HPYPFTVRGYN--------GEYRAKAVILATG--ADPRKLGIPGEDNF-- 134 (325)
T ss_dssp HHHHHHHTTCEE--EE-CCEEEEEECTTS-SSCCEEEEESS--------CEEEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHcCCEE--Ee-eeEEEEEeccCC-CceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc--
Confidence 998888888775 55 689999876 3 12377877665 6799999999999 67888888887765
Q ss_pred CCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHH
Q 016069 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (396)
.+..++.+...+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++... +.
T Consensus 135 ----~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~------------------- 190 (325)
T 2q7v_A 135 ----WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-AN------------------- 190 (325)
T ss_dssp ----BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-SC-------------------
T ss_pred ----cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-cc-------------------
Confidence 444455443333334457999999999999999999999999999999887321 10
Q ss_pred HHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhh-cCCCeEEccC--ceeEECC----eEEec---C
Q 016069 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN----EVIFE---N 314 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~~~--v~~~~~~----~v~~~---~ 314 (396)
..+.+.+ ++.+|+++.+ ++++..+ ++.++ +
T Consensus 191 ----------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~ 230 (325)
T 2q7v_A 191 ----------------------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKT 230 (325)
T ss_dssp ----------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTT
T ss_pred ----------------------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCC
Confidence 0012223 3468999887 8888665 57775 6
Q ss_pred Cc--EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHHHHH
Q 016069 315 GH--SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADH 388 (396)
Q Consensus 315 g~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~ 388 (396)
|+ ++++|.||+|+|++|++. ++. . ...++++|++.+|.. ..|+.|+|||+|||+.. ...|..||+.+|.+
T Consensus 231 g~~~~i~~D~vi~a~G~~p~~~-~l~-~-~~~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 306 (325)
T 2q7v_A 231 GEVSELATDGVFIFIGHVPNTA-FVK-D-TVSLRDDGYVDVRDE-IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMM 306 (325)
T ss_dssp CCEEEEECSEEEECSCEEESCG-GGT-T-TSCBCTTSCBCCBTT-TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCEEEEccCCCCChH-HHh-h-hcccCCCccEecCCC-CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHH
Confidence 75 789999999999999984 444 3 234577889888844 66889999999999865 33789999999999
Q ss_pred HhhhcC
Q 016069 389 INSILS 394 (396)
Q Consensus 389 i~~~l~ 394 (396)
|.+.+.
T Consensus 307 i~~~l~ 312 (325)
T 2q7v_A 307 TERQLA 312 (325)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 11
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=4e-36 Score=275.55 Aligned_cols=285 Identities=17% Similarity=0.250 Sum_probs=219.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|+|+. .||.|.... ..+.++.++ .....++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~~-------~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGLI-------EIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTST-------TEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCCC-------CCCHHHHHHH
Confidence 479999999999999999999999999999998 788776421 001111111 1457889999
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.+.++++++ ++ ++|++++.+. +.|.+.+.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK--------GEFKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS--------CEEEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC--------CEEEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999888876 66 8999998865 6788888765 6799999999999 66888888888776
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHH
Q 016069 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
.+..++.+...+.....+++++|+|+|.+|+|+|..|.+.+.+|+++.+++. .++..
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~-~~~~~-------------------- 193 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT-FKAQP-------------------- 193 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS-CCSCH--------------------
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC-CCcCH--------------------
Confidence 5555555544444455689999999999999999999999999999999883 22210
Q ss_pred HHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhh-hcCCCeEEccC--ceeEECC----eEEecC---Cc
Q 016069 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEK-IKSGQIQVLPG--IESIRGN----EVIFEN---GH 316 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~~~--v~~~~~~----~v~~~~---g~ 316 (396)
.+.+. .++.+|+++.+ +++++.+ ++.+.+ |+
T Consensus 194 ---------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~ 234 (323)
T 3f8d_A 194 ---------------------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGE 234 (323)
T ss_dssp ---------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCC
T ss_pred ---------------------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCc
Confidence 01232 34459999988 8888765 477776 76
Q ss_pred --EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc------ccCchHHHHHHHHH
Q 016069 317 --SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADH 388 (396)
Q Consensus 317 --~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~~ 388 (396)
++++|.||+|+|++|+++ +++ ..+...+++|++.+|. ...|+.|+|||+|||+.. ...|..+|+.+|.+
T Consensus 235 ~~~~~~D~vv~a~G~~p~~~-~~~-~~g~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 311 (323)
T 3f8d_A 235 IKELNVNGVFIEIGFDPPTD-FAK-SNGIETDTNGYIKVDE-WMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATS 311 (323)
T ss_dssp EEEEECSEEEECCCEECCHH-HHH-HTTCCBCTTSSBCCCT-TCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEEEECCCCChh-HHh-hcCeeecCCCcEecCC-CceecCCCEEEcceecCCCCcccceeehhhHHHHHHHH
Confidence 789999999999999974 444 3244567889998884 566889999999999874 33889999999999
Q ss_pred HhhhcC
Q 016069 389 INSILS 394 (396)
Q Consensus 389 i~~~l~ 394 (396)
|.+.+.
T Consensus 312 i~~~l~ 317 (323)
T 3f8d_A 312 AYRYVT 317 (323)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 12
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=9.1e-36 Score=271.90 Aligned_cols=286 Identities=21% Similarity=0.314 Sum_probs=214.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
+||+|||||++|+++|..|++.|+ +|+|+|+. ..||.|.... ....++. .+...+..++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~----------~~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSS----------EIENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCS----------CBCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccccc----------ccccCCC------CcccCCHHHHHHH
Confidence 699999999999999999999999 99999995 5677665321 0001111 1223577889999
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.+.+++++. +. ++|++++.+. +.|.+.+.++ .+++||+||+|+| +.|..|.++|.+.+
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG--------KTFEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC--------CEEECCEEEECCC--CCCCCCCCCChhhc----
Confidence 998888888765 55 7899998865 5677877654 5799999999999 67888888887665
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHH
Q 016069 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.|.+|+++.|++... . .
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~--~------------------- 181 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-C--A------------------- 181 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-S--C-------------------
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-C--C-------------------
Confidence 444444443333333457999999999999999999999999999999887321 0 0
Q ss_pred HHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhh-cCCCeEEccC--ceeEECC-----eEEec---CC
Q 016069 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN-----EVIFE---NG 315 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~~~--v~~~~~~-----~v~~~---~g 315 (396)
+.+.+.+ ++.+|+++.+ +++++.+ ++.++ +|
T Consensus 182 --------------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g 223 (311)
T 2q0l_A 182 --------------------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATN 223 (311)
T ss_dssp --------------------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTC
T ss_pred --------------------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCC
Confidence 0012333 3468999887 7777654 46776 67
Q ss_pred c--EEeCcEEEECCCCCCCcccccccCCC----CCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHH
Q 016069 316 H--SHHFDSIVFCTGFKRSTNVWLKQGDD----SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNI 385 (396)
Q Consensus 316 ~--~~~~D~vi~atG~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~ 385 (396)
+ ++++|.||+|+|++|+++ ++. ... ..++++|++.+|. ...|+.|+|||+|||+.. ...|..||+.+
T Consensus 224 ~~~~i~~D~vi~a~G~~p~~~-~l~-~~g~~~~l~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~a 300 (311)
T 2q0l_A 224 EKRELVVPGFFIFVGYDVNNA-VLK-QEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATA 300 (311)
T ss_dssp CEEEEECSEEEECSCEEECCG-GGB-CTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHH
T ss_pred ceEEEecCEEEEEecCccChh-hhh-cccccceeEeccCCCEEeCC-ccccCCCCeEEcccccCcchHHHHHHHHhHHHH
Confidence 5 789999999999999984 444 322 3457789998884 466889999999999875 33789999999
Q ss_pred HHHHhhhcC
Q 016069 386 ADHINSILS 394 (396)
Q Consensus 386 a~~i~~~l~ 394 (396)
|.+|.+.+.
T Consensus 301 a~~i~~~l~ 309 (311)
T 2q0l_A 301 ALSVISYLE 309 (311)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988763
No 13
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5e-36 Score=271.64 Aligned_cols=282 Identities=16% Similarity=0.190 Sum_probs=216.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|+|+.+..+..+... ..++ . ....+..++..+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~----------------~~~~--~--~~~~~~~~~~~~ 61 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS----------------HGFL--G--QDGKAPGEIIAE 61 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC----------------CSST--T--CTTCCHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh----------------cCCc--C--CCCCCHHHHHHH
Confidence 3799999999999999999999999999999976433221100 0011 0 123567888999
Q ss_pred HHHHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 87 LDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+.+.+.++ ++. +.+++|++++.++ +.|.|.+.++ .++.||+||+||| +.|+.|.++|.+.+
T Consensus 62 ~~~~~~~~~~v~---~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~vviAtG--~~~~~~~~~g~~~~--- 123 (297)
T 3fbs_A 62 ARRQIERYPTIH---WVEGRVTDAKGSF--GEFIVEIDGG--------RRETAGRLILAMG--VTDELPEIAGLRER--- 123 (297)
T ss_dssp HHHHHTTCTTEE---EEESCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--CEEECCCCBTTGGG---
T ss_pred HHHHHHhcCCeE---EEEeEEEEEEEcC--CeEEEEECCC--------CEEEcCEEEECCC--CCCCCCCCCCchhh---
Confidence 98888876 333 4567999999876 6788988765 6799999999999 67888889988876
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+...+.+.+.+.....+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .
T Consensus 124 ---~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-~----------------------- 175 (297)
T 3fbs_A 124 ---WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-E----------------------- 175 (297)
T ss_dssp ---BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-C-----------------------
T ss_pred ---cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-C-----------------------
Confidence 55556655554555566899999999999999999999998 9999988772 1
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC-eEEecCCcEEeCcEE
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-EVIFENGHSHHFDSI 323 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~-~v~~~~g~~~~~D~v 323 (396)
....+.+.+++.+|+++.. +++++.+ .+.++||+++++|.|
T Consensus 176 -------------------------------------~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~v 218 (297)
T 3fbs_A 176 -------------------------------------PDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGL 218 (297)
T ss_dssp -------------------------------------CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEE
T ss_pred -------------------------------------CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEE
Confidence 1111235567788888865 8888887 799999999999999
Q ss_pred EECCCCCCCcccccccCCCCCCC--CCC-CcCCCCCCCccCCCceEEEeccccc---ccCchHHHHHHHHHHhhhcC
Q 016069 324 VFCTGFKRSTNVWLKQGDDSMLN--DDG-IPKQSYPNHWKGKNGLYCVGLSRKG---LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 324 i~atG~~~~~~~~~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~vya~Gd~~~~---~~~a~~~a~~~a~~i~~~l~ 394 (396)
|+|+|++|+.+ +++ ......+ ++| ++.++. ...|+.|+|||+|||+.. ...|..+|+.+|.+|.+.+.
T Consensus 219 i~a~G~~p~~~-~~~-~~g~~~~~~~~G~~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 219 FTQPKLRITVD-WIE-KLGCAVEEGPMGSTIVTDP-MKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp EECCEEECCCS-CHH-HHTCCEEEETTEEEECCCT-TCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCcccCch-hHH-hcCCccccCCCCceEEeCC-CCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHh
Confidence 99999999985 444 2122233 356 777773 466889999999999875 33889999999999988764
No 14
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-35 Score=272.07 Aligned_cols=296 Identities=20% Similarity=0.308 Sum_probs=218.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|||+.+..||.|... ++...+ +..+.++ .....++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKYI------YDVAGFP-------KVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSEE------CCSTTCS-------SEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCcee------eccCCCC-------CCCHHHHHHH
Confidence 5899999999999999999999999999999999999888532 222111 1111111 1356788888
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCCccccccC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s-~p~~~~~~g~~~~~~~ 165 (396)
+.+.+.++++.+ +++++|++++.++ +.|.|.+.++ .++.||+||+|||..+ .|..|+++|.+.+
T Consensus 71 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~--- 135 (335)
T 2zbw_A 71 LVEQVAPFNPVY--SLGERAETLEREG--DLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREF--- 135 (335)
T ss_dssp HHHHHGGGCCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEECC--CEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhc---
Confidence 888888887665 8899999998875 4788887654 5799999999999533 5777788887665
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +++... ..
T Consensus 136 ---~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~-~~~~~~--~~-------------- 194 (335)
T 2zbw_A 136 ---EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ-FRAHEA--SV-------------- 194 (335)
T ss_dssp ---BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CCSCHH--HH--------------
T ss_pred ---cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc-cCccHH--HH--------------
Confidence 33323322 2233445689999999999999999999999999999999883 222110 00
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC----eEEec---CC-
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFE---NG- 315 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~----~v~~~---~g- 315 (396)
..+.+.+++.+|+++.+ +.+++.+ .+.++ +|
T Consensus 195 ---------------------------------------~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~ 235 (335)
T 2zbw_A 195 ---------------------------------------KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQE 235 (335)
T ss_dssp ---------------------------------------HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCC
T ss_pred ---------------------------------------HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCc
Confidence 11235567779999888 8888765 57776 77
Q ss_pred -cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc------ccCchHHHHHHHHH
Q 016069 316 -HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADH 388 (396)
Q Consensus 316 -~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~~ 388 (396)
+++++|.||+|+|++|+++ +++ ......+ +|.+.+|. ...|+.|+|||+|||+.. ...|..+|..+|++
T Consensus 236 ~~~i~~D~vi~a~G~~p~~~-~l~-~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 311 (335)
T 2zbw_A 236 ELALEVDAVLILAGYITKLG-PLA-NWGLALE-KNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANH 311 (335)
T ss_dssp EEEEECSEEEECCCEEEECG-GGG-GSCCCEE-TTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHH
T ss_pred eEEEecCEEEEeecCCCCch-Hhh-hcceecc-CCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHH
Confidence 5789999999999999985 444 3122233 67887774 556889999999999753 23688899999999
Q ss_pred HhhhcCC
Q 016069 389 INSILSP 395 (396)
Q Consensus 389 i~~~l~~ 395 (396)
|.+.+.+
T Consensus 312 i~~~l~~ 318 (335)
T 2zbw_A 312 AAAYANP 318 (335)
T ss_dssp HHHHHCT
T ss_pred HHHHhhh
Confidence 9988753
No 15
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=9.4e-36 Score=272.14 Aligned_cols=291 Identities=16% Similarity=0.226 Sum_probs=200.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.|||+||||||||++||..|+++|++|+|||+....|..+....+.... +..++. ++...+..++.+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~------i~~~~g------~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTI------IENFPG------FPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSE------ECCSTT------CTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHH------hhhccC------CcccCCHHHHHHH
Confidence 5899999999999999999999999999999875322222211111111 111111 1223466788888
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.+++++.. .....+....... ..+.+.+.++ .++.||+||+||| +.|+.|++||.+..
T Consensus 72 ~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~~~~~--------~~~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTT---IITETIDHVDFST--QPFKLFTEEG--------KEVLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCE---EECCCEEEEECSS--SSEEEEETTC--------CEEEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcE---EEEeEEEEeecCC--CceEEEECCC--------eEEEEeEEEEccc--ccccccCCCccccc----
Confidence 88888888766 4455566665544 5555666554 7899999999999 78999999998765
Q ss_pred CCCcceeeccCCCCC--CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHH
Q 016069 167 TGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~--~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (396)
.+...+.+.+... ....+++++|||+|.+|+|+|..|.+.|.+||+++|.+....+....
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~---------------- 194 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQ---------------- 194 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHH----------------
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccchhh----------------
Confidence 4444444433222 22458999999999999999999999999999999887322111110
Q ss_pred HHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-----eEEe-----
Q 016069 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF----- 312 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-----~v~~----- 312 (396)
.+.....+++.+.. +.++... ++.+
T Consensus 195 -------------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 231 (314)
T 4a5l_A 195 -------------------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVS 231 (314)
T ss_dssp -------------------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTT
T ss_pred -------------------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccc
Confidence 11122223333322 2222211 2222
Q ss_pred cCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc----CchHHHHHHHHH
Q 016069 313 ENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY----GAAADAQNIADH 388 (396)
Q Consensus 313 ~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~a~~~a~~ 388 (396)
.+++++++|.|++|+|++||+.. +. . ....+++|+++++ .+.|+.|+|||+|||+..+. .|+.+|+.+|.+
T Consensus 232 ~~~~~i~~d~vi~a~G~~pn~~~-l~-~-~~~~~~~G~iv~~--~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~ 306 (314)
T 4a5l_A 232 GEYKVVPVAGLFYAIGHSPNSKF-LG-G-QVKTADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALS 306 (314)
T ss_dssp CCEEEEECSEEEECSCEEESCGG-GT-T-SSCBCTTSCBCCB--TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHH
T ss_pred ccceeeccccceEecccccChhH-hc-c-cceEcCCeeEeCC--CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHH
Confidence 34578999999999999999954 44 2 4567888887544 67899999999999987643 688899999999
Q ss_pred HhhhcC
Q 016069 389 INSILS 394 (396)
Q Consensus 389 i~~~l~ 394 (396)
|.++|.
T Consensus 307 ~~~yL~ 312 (314)
T 4a5l_A 307 CEKWLQ 312 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988763
No 16
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.2e-35 Score=269.24 Aligned_cols=286 Identities=18% Similarity=0.307 Sum_probs=210.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.+||+|||||++|+++|..|++.|++|+|+|+. ..||.|.... .+..++.+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAP----------LVENYLGF-------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCS----------CBCCBTTB-------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccc----------hhhhcCCC-------cccCHHHHHHH
Confidence 479999999999999999999999999999994 5677654321 00001110 12456788888
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.+++.++.. +. .+|++++... +.|.|.+ ++ .++.||+||+|+| +.|+.|.+++.+.+
T Consensus 78 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~-~~--------~~~~~~~li~AtG--~~~~~~~i~g~~~~---- 137 (319)
T 3cty_A 78 FADHAANYAKIR--EG-VEVRSIKKTQ--GGFDIET-ND--------DTYHAKYVIITTG--TTHKHLGVKGESEY---- 137 (319)
T ss_dssp HHHHHHTTSEEE--ET-CCEEEEEEET--TEEEEEE-SS--------SEEEEEEEEECCC--EEECCCCCBTTTTT----
T ss_pred HHHHHHHcCCEE--EE-eeEEEEEEeC--CEEEEEE-CC--------CEEEeCEEEECCC--CCcccCCCCChHHh----
Confidence 888888887664 55 7899998765 5677776 32 5689999999999 67888888887654
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHH
Q 016069 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|.+... +.
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-~~--------------------- 193 (319)
T 3cty_A 138 --FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-CE--------------------- 193 (319)
T ss_dssp --BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-SC---------------------
T ss_pred --CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-CC---------------------
Confidence 333344332222223457899999999999999999999999999999887321 10
Q ss_pred HHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-----eEEec---CCc
Q 016069 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE---NGH 316 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-----~v~~~---~g~ 316 (396)
+.+.+.+.+.+|+++.+ ++++..+ ++.+. +|+
T Consensus 194 --------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~ 235 (319)
T 3cty_A 194 --------------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGE 235 (319)
T ss_dssp --------------------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCC
T ss_pred --------------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCc
Confidence 01123445678888877 7777654 36665 675
Q ss_pred --EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHHHHHHh
Q 016069 317 --SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHIN 390 (396)
Q Consensus 317 --~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~ 390 (396)
++++|.||+|+|++|++. ++. ..+..++++|++.+|.. +.|+.|+|||+|||+.. ...|..||+.+|.+|.
T Consensus 236 ~~~i~~D~vi~a~G~~p~~~-~l~-~~gl~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 236 EKLIETDGVFIYVGLIPQTS-FLK-DSGVKLDERGYIVVDSR-QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp EEEECCSEEEECCCEEECCG-GGT-TSCCCBCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecCEEEEeeCCccChH-HHh-hccccccCCccEeCCCC-CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 689999999999999984 444 32344677899988844 66899999999999865 3378999999999999
Q ss_pred hhcCC
Q 016069 391 SILSP 395 (396)
Q Consensus 391 ~~l~~ 395 (396)
+.+..
T Consensus 313 ~~l~~ 317 (319)
T 3cty_A 313 SDSIS 317 (319)
T ss_dssp HHHTC
T ss_pred HHhhc
Confidence 98864
No 17
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-35 Score=269.25 Aligned_cols=288 Identities=18% Similarity=0.268 Sum_probs=196.0
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc-cCCcCceeeccccccccCCCCCCCCCCCCCCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK-KYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (396)
|++. .|||+||||||||++||..|++.|++|+|||+. ..||++. ..+. +.++.+ ....
T Consensus 2 Mte~--~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i-----------~~~p~~-------~~~~ 60 (312)
T 4gcm_A 2 MTEI--DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEV-----------ENFPGF-------EMIT 60 (312)
T ss_dssp --CC--SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCB-----------CCSTTC-------SSBC
T ss_pred CCCC--CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccccc-----------CCcCCc-------cccc
Confidence 6643 599999999999999999999999999999986 4555432 2111 111111 1235
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCc
Q 016069 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGL 159 (396)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~ 159 (396)
..++.........+..... ..+..+...... .. .+...++ .+++||++|+||| ++|+.|++||.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~-~~~~~~~--------~~~~~d~liiAtG--s~~~~~~ipG~ 124 (312)
T 4gcm_A 61 GPDLSTKMFEHAKKFGAVY--QYGDIKSVEDKG---EY-KVINFGN--------KELTAKAVIIATG--AEYKKIGVPGE 124 (312)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EECCCCEEEECS---SC-EEEECSS--------CEEEEEEEEECCC--EEECCCCCTTT
T ss_pred hHHHHHHHHHHHhhccccc--cceeeeeeeeee---cc-eeeccCC--------eEEEeceeEEccc--CccCcCCCCCh
Confidence 5666666666666655443 444444443332 22 2333333 6899999999999 78999999998
Q ss_pred cccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCC
Q 016069 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP 239 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~ 239 (396)
+.+ .+..++++...+...+.+++++|||+|++|+|+|..|.+.|.+||+++|++ ..++.....
T Consensus 125 ~~~------~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~---------- 187 (312)
T 4gcm_A 125 QEL------GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRILQ---------- 187 (312)
T ss_dssp TTT------BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHHH----------
T ss_pred hhh------CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhHH----------
Confidence 876 555566555555555668999999999999999999999999999999988 444433221
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE--CC-----eE
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GN-----EV 310 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~--~~-----~v 310 (396)
...++..++..... +.... .. ..
T Consensus 188 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (312)
T 4gcm_A 188 ------------------------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTL 219 (312)
T ss_dssp ------------------------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEE
T ss_pred ------------------------------------------------HHHHHhcCcceeeecceeeeecccccccccee
Confidence 01122233333322 11111 00 01
Q ss_pred -E--ecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHH
Q 016069 311 -I--FENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQ 383 (396)
Q Consensus 311 -~--~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~ 383 (396)
. ..++..+++|.|++++|..|+... +. . ....+++|++.+| +.+.|+.|+|||+|||+.. +..|..||+
T Consensus 220 ~~~~~~~~~~~~~d~v~~~~g~~~~~~~-~~-~-~g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~ 295 (312)
T 4gcm_A 220 TSTKDGSEETHEADGVFIYIGMKPLTAP-FK-D-LGITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGS 295 (312)
T ss_dssp EETTTCCEEEEECSEEEECSCEEESCGG-GG-G-GTCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHH
T ss_pred eeecCCceeEEeeeeEEeecCCCcCchh-HH-h-cceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHH
Confidence 1 123457899999999999999944 33 2 5567788988888 5677899999999999864 237889999
Q ss_pred HHHHHHhhhcC
Q 016069 384 NIADHINSILS 394 (396)
Q Consensus 384 ~~a~~i~~~l~ 394 (396)
.+|.+|.++|.
T Consensus 296 ~AA~~i~~~L~ 306 (312)
T 4gcm_A 296 IAAQSAAEYIE 306 (312)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988763
No 18
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-35 Score=271.01 Aligned_cols=286 Identities=16% Similarity=0.225 Sum_probs=212.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.+||+|||||++|+++|..|++.|++|+|+|+. ..||.|..... ...++. ++......++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 76 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELMDE 76 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHHHH
Confidence 579999999999999999999999999999975 56776653210 001111 1112456788899
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEE-EEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNV-KASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v-~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+.+.+.+++++. ++++ |++++. . +.|.| .+.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 77 l~~~~~~~~v~~--~~~~-v~~i~~-~--~~~~v~~~~~g--------~~~~~d~lviAtG--~~~~~~~i~g~~~~--- 137 (335)
T 2a87_A 77 MREQALRFGADL--RMED-VESVSL-H--GPLKSVVTADG--------QTHRARAVILAMG--AAARYLQVPGEQEL--- 137 (335)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEEC-S--SSSEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTHHHHT---
T ss_pred HHHHHHHcCCEE--EEee-EEEEEe-C--CcEEEEEeCCC--------CEEEeCEEEECCC--CCccCCCCCchHhc---
Confidence 988888888765 6766 888887 3 56778 66554 5799999999999 67888888887655
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+..++.+.........+++++|||+|.+|+|+|..|.+.+.+|+++.|++... +.
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-~~-------------------- 193 (335)
T 2a87_A 138 ---LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-AS-------------------- 193 (335)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-SC--------------------
T ss_pred ---cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-cc--------------------
Confidence 334444433322223458999999999999999999999999999999887321 00
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhh-hhhcCCCeEEccC--ceeEECCe----EEec---CC
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE----VIFE---NG 315 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~~~--v~~~~~~~----v~~~---~g 315 (396)
+.+. +.+++.+|+++.+ +++++.++ +.++ +|
T Consensus 194 ---------------------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g 234 (335)
T 2a87_A 194 ---------------------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTG 234 (335)
T ss_dssp ---------------------------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTS
T ss_pred ---------------------------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCC
Confidence 0011 2345679999887 88887654 7775 45
Q ss_pred --cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHHHHHH
Q 016069 316 --HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHI 389 (396)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i 389 (396)
+++++|.||+|+|++|++. ++. . ....+++|++.++...+.|+.|+|||+|||+.. ...|..+|+.+|.+|
T Consensus 235 ~~~~i~~D~vi~a~G~~p~~~-~~~-~-~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i 311 (335)
T 2a87_A 235 AETTLPVTGVFVAIGHEPRSG-LVR-E-AIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDA 311 (335)
T ss_dssp CCEEECCSCEEECSCEEECCT-TTB-T-TBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHH
T ss_pred ceEEeecCEEEEccCCccChh-Hhh-c-ccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHH
Confidence 5789999999999999984 334 2 334677899998866678899999999999875 237889999999999
Q ss_pred hhhcC
Q 016069 390 NSILS 394 (396)
Q Consensus 390 ~~~l~ 394 (396)
.+.+.
T Consensus 312 ~~~l~ 316 (335)
T 2a87_A 312 ERWLA 316 (335)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 87663
No 19
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.6e-35 Score=270.54 Aligned_cols=287 Identities=16% Similarity=0.225 Sum_probs=211.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEec----CCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~----~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (396)
.+||+|||||++|+++|..|++.|++|+|+|+ ....||.|.... ....++.+ +......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~~------~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPGF------PEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTTC------TTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCCC------ccCCCHHH
Confidence 47999999999999999999999999999998 455666554221 00011111 11235678
Q ss_pred HHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc-
Q 016069 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS- 161 (396)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~- 161 (396)
+..++.+.+++.++++ +.++ |++++... +.|.|.+ ++ .++++|+||+|+| +.|..|.++|.+.
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~--------~~~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS--------KAILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS--------EEEEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC--------cEEEcCEEEECCC--CCcCCCCCCCcccc
Confidence 8888888888888775 6665 88888754 6687877 43 6799999999999 5677788887665
Q ss_pred ---cccCCCCCcceeeccCCCCCCC--CCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhh
Q 016069 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLR 236 (396)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~ 236 (396)
+ .+..++.+....... ..+++++|||+|.+|+|+|..|.+.+.+|+++.|++... +.
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-~~----------- 197 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-AS----------- 197 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-SC-----------
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-cc-----------
Confidence 3 333444433222222 458999999999999999999999999999999987321 00
Q ss_pred cCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhh-hhhcCCCeEEccC--ceeEECCe----
Q 016069 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE---- 309 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~~~--v~~~~~~~---- 309 (396)
+.+. +.+++.+|+++.+ +.+++.++
T Consensus 198 ------------------------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 229 (333)
T 1vdc_A 198 ------------------------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDV 229 (333)
T ss_dssp ------------------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSS
T ss_pred ------------------------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccc
Confidence 0011 2345678999887 88886543
Q ss_pred ---EEec---CC--cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccC
Q 016069 310 ---VIFE---NG--HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYG 377 (396)
Q Consensus 310 ---v~~~---~g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~ 377 (396)
+.++ +| +++++|.||+|+|++|++. ++. . ....+++|++.++...+.|+.|+|||+|||+.. ...
T Consensus 230 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~-~-~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~ 306 (333)
T 1vdc_A 230 LGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATK-FLD-G-GVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAIT 306 (333)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGT-T-SSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHH
T ss_pred eeeEEEEecCCCceEEEecCEEEEEeCCccchH-Hhh-c-cccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHH
Confidence 7776 45 5789999999999999984 444 2 334577899988865567899999999999875 337
Q ss_pred chHHHHHHHHHHhhhcC
Q 016069 378 AAADAQNIADHINSILS 394 (396)
Q Consensus 378 a~~~a~~~a~~i~~~l~ 394 (396)
|..+|+.+|.+|.+.+.
T Consensus 307 A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 307 AAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHH
Confidence 88999999999988763
No 20
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=5.8e-35 Score=266.45 Aligned_cols=287 Identities=18% Similarity=0.250 Sum_probs=213.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|+|+ ..||.|.... .+..+. ...+....++.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~-------------~~~~~~----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV-------------DIENYI----SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC-------------EECCBT----TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc-------------cccccc----CcCCCCHHHHHHH
Confidence 37999999999999999999999999999986 4677775321 000000 0113456788899
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCC-CCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+.+.++++++++ +.+++|+.++.+.. .+.|.|.+.++ .++.||+||+||| +.|..|.++|.+.+
T Consensus 62 ~~~~~~~~~v~~--~~~~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~--- 126 (310)
T 1fl2_A 62 LKVHVDEYDVDV--IDSQSASKLIPAAVEGGLHQIETASG--------AVLKARSIIVATG--AKWRNMNVPGEDQY--- 126 (310)
T ss_dssp HHHHHHTSCEEE--ECSCCEEEEECCSSTTCCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCeE--EccCEEEEEEecccCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 988888887665 88889999986532 24688888764 5789999999999 56777888887765
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+..++.+.........+++++|||+|.+|+|+|..|.+.+.+|+++.|.+... .+
T Consensus 127 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~------------------ 182 (310)
T 1fl2_A 127 ---RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---AD------------------ 182 (310)
T ss_dssp ---BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SC------------------
T ss_pred ---ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---cc------------------
Confidence 444444433322233458999999999999999999999999999999888321 00
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcC-CCeEEccC--ceeEECC-----eEEecC---
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN--- 314 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~--v~~~~~~-----~v~~~~--- 314 (396)
+.+.+.+++ .+|+++.+ ++++..+ ++.+.+
T Consensus 183 ---------------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~ 223 (310)
T 1fl2_A 183 ---------------------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS 223 (310)
T ss_dssp ---------------------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTT
T ss_pred ---------------------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCC
Confidence 011234444 68999887 8888654 466654
Q ss_pred Cc--EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc----cCchHHHHHHHHH
Q 016069 315 GH--SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADH 388 (396)
Q Consensus 315 g~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~~ 388 (396)
|+ ++++|.||+|+|++||+. ++. . ...++++|++.+|.. +.|+.|+|||+|||+..+ ..|..+|+.+|.+
T Consensus 224 g~~~~i~~D~vi~a~G~~p~~~-~l~-~-~l~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 299 (310)
T 1fl2_A 224 GDIHNIELAGIFVQIGLLPNTN-WLE-G-AVERNRMGEIIIDAK-CETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLS 299 (310)
T ss_dssp CCEEEEECSEEEECSCEEESCG-GGT-T-TSCBCTTSCBCCCTT-CBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCEEEEeeCCccCch-HHh-c-cccccCCCcEEcCCC-CccCCCCEEEeecccCCcchhhhhhHhhHHHHHHH
Confidence 53 689999999999999984 445 3 344577889988854 458999999999998753 3789999999999
Q ss_pred HhhhcC
Q 016069 389 INSILS 394 (396)
Q Consensus 389 i~~~l~ 394 (396)
|.+.+.
T Consensus 300 i~~~l~ 305 (310)
T 1fl2_A 300 AFDYLI 305 (310)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 21
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.9e-35 Score=266.02 Aligned_cols=290 Identities=20% Similarity=0.297 Sum_probs=217.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEE-EecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~l-ie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
++||+|||||++|+++|..|+++|++|+| +|+ +..||.|..... + ..++ ..+...+..++..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~---~~~~---~~~~~~~~~~~~~ 66 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------I---ENYP---GVAQVMDGISFMA 66 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------B---CCST---TCCSCBCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------e---ccCC---CCCCCCCHHHHHH
Confidence 58999999999999999999999999999 999 667887764210 0 0111 1122357789999
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
++.+.+++++++. +++ +|+++ .+...+.|.+..... ..+.||+||+||| +.|+.|.++|.+.+
T Consensus 67 ~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~--------~~~~~d~lvlAtG--~~~~~~~~~g~~~~--- 129 (315)
T 3r9u_A 67 PWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG--------KTELAKAVIVCTG--SAPKKAGFKGEDEF--- 129 (315)
T ss_dssp HHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTTTTT---
T ss_pred HHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC--------CEEEeCEEEEeeC--CCCCCCCCCChhhc---
Confidence 9999999888775 666 88888 543225677534332 3689999999999 68888889888776
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+..++.+.+.......+++++|+|+|.+|+|+|..|.+.+.+|+++.+.+... . . ..
T Consensus 130 ---~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-~-~-~~---------------- 187 (315)
T 3r9u_A 130 ---FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-A-A-PS---------------- 187 (315)
T ss_dssp ---BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-S-C-HH----------------
T ss_pred ---CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-C-C-HH----------------
Confidence 555666655544445568999999999999999999999999999999888321 0 0 00
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe-----EEec--CCc
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFE--NGH 316 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~-----v~~~--~g~ 316 (396)
...+.+++.+|+++.+ +.+++.+. +.+. +|+
T Consensus 188 ----------------------------------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~ 227 (315)
T 3r9u_A 188 ----------------------------------------TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGS 227 (315)
T ss_dssp ----------------------------------------HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSC
T ss_pred ----------------------------------------HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCC
Confidence 0123345789999877 88876543 6666 776
Q ss_pred --EEeCcEEEECCCCCCCccccccc-C-CC-CCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHHHH
Q 016069 317 --SHHFDSIVFCTGFKRSTNVWLKQ-G-DD-SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIAD 387 (396)
Q Consensus 317 --~~~~D~vi~atG~~~~~~~~~~~-~-~~-~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~ 387 (396)
++++|.||+|+|++|+.. ++.. + .+ ...+++|++.+|. ...|+.|+|||+|||+.. ...|..+|+.+|.
T Consensus 228 ~~~~~~D~vv~a~G~~p~~~-~~~~~~~~g~l~~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~ 305 (315)
T 3r9u_A 228 IRDLNVPGIFTFVGLNVRNE-ILKQDDSKFLCNMEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAAL 305 (315)
T ss_dssp EEEECCSCEEECSCEEECCG-GGBCTTSCBSSCBCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHH
T ss_pred eEEeecCeEEEEEcCCCCch-hhhcccccceeeecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHH
Confidence 789999999999999984 3330 1 11 3467789998884 566789999999999743 3489999999999
Q ss_pred HHhhhcC
Q 016069 388 HINSILS 394 (396)
Q Consensus 388 ~i~~~l~ 394 (396)
+|.+.+.
T Consensus 306 ~i~~~l~ 312 (315)
T 3r9u_A 306 SAMAYIE 312 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 22
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1e-34 Score=270.50 Aligned_cols=297 Identities=20% Similarity=0.274 Sum_probs=217.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.+||+|||||++|+++|..|++.|++|+|||+.+..||.|... ++... ++..+.++ .....++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGFP-------EVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCCC-------CCCHHHHHHH
Confidence 5799999999999999999999999999999999899887532 22111 11111110 1356788888
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCC-cccccc
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRG-LSSFCS 164 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s-~p~~~~~~g-~~~~~~ 164 (396)
+.+.++++++.+ +++++|++++..+ .+.|.|.+.++ ..+.||+||+|+|..+ .|..+.++| .+.+
T Consensus 80 l~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPDV--VLNETVTKYTKLD-DGTFETRTNTG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCEE--EcCCEEEEEEECC-CceEEEEECCC--------cEEEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 888888887665 8899999999864 24788888664 5799999999999644 577777777 6555
Q ss_pred CCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHH
Q 016069 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (396)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +.+...
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~~~----------------- 203 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE-FQGHGK----------------- 203 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CSSCSH-----------------
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC-CCCCHH-----------------
Confidence 44333332 2333445689999999999999999999999999999999873 211110
Q ss_pred HHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-----eEEec--CC
Q 016069 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE--NG 315 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-----~v~~~--~g 315 (396)
....+.+..++.+|+++.+ +++++.+ +|.+. +|
T Consensus 204 --------------------------------------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g 245 (360)
T 3ab1_A 204 --------------------------------------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDG 245 (360)
T ss_dssp --------------------------------------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTC
T ss_pred --------------------------------------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCC
Confidence 0011234456678999888 7787654 56665 77
Q ss_pred --cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc------ccCchHHHHHHHH
Q 016069 316 --HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIAD 387 (396)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~ 387 (396)
+++++|.||+|+|++|+.. ++. ......+ +|.+.+|. ...|+.|+|||+|||+.. ...|..||..+|+
T Consensus 246 ~~~~i~~D~vi~a~G~~p~~~-~l~-~~~~~~~-~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~ 321 (360)
T 3ab1_A 246 SKWTVEADRLLILIGFKSNLG-PLA-RWDLELY-ENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVR 321 (360)
T ss_dssp CEEEEECSEEEECCCBCCSCG-GGG-GSSCCEE-TTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHH
T ss_pred CeEEEeCCEEEECCCCCCCHH-HHH-hhccccc-cCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHH
Confidence 5789999999999999985 444 3122234 67887774 556789999999999753 2378899999999
Q ss_pred HHhhhcCC
Q 016069 388 HINSILSP 395 (396)
Q Consensus 388 ~i~~~l~~ 395 (396)
+|.+.+.+
T Consensus 322 ~i~~~l~~ 329 (360)
T 3ab1_A 322 HSLSYIKP 329 (360)
T ss_dssp HHHHHHSC
T ss_pred HHHhhcCC
Confidence 99987754
No 23
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2e-34 Score=269.31 Aligned_cols=309 Identities=18% Similarity=0.257 Sum_probs=213.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCcccccCCcCceeecccc---ccccCCCCCC--CCC------C
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAK---QFCQLPHLPF--PSS------Y 74 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~------~ 74 (396)
++||+|||||++|+++|..|++.|. +|+|||+.+ +||.|...... ..+..+. ..+.+..+.. ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999988 88888642111 1111111 1111111110 000 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 75 PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
..++...++..++.+.++++++.+ ++++.|++++.++ +.|.|.+.+ .++.||+||+|+|.++.|.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~~d~vVlAtG~~~~p~-- 146 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNI--FENTVVTNISADD--AYYTIATTT---------ETYHADYIFVATGDYNFPK-- 146 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CCEEEEEEEECCCSTTSBC--
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEECC--CeEEEEeCC---------CEEEeCEEEECCCCCCccC--
Confidence 234677888999999988888775 8899999999865 578888764 3589999999999654443
Q ss_pred CCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHH
Q 016069 155 DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (396)
Q Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (396)
+|+ . ..+|+..+.....+.+++++|||+|.+|+|+|..|.+.|.+|+++.|++.+..+..+.+.
T Consensus 147 -ip~-~----------~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~---- 210 (369)
T 3d1c_A 147 -KPF-K----------YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSV---- 210 (369)
T ss_dssp -CCS-S----------SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTT----
T ss_pred -CCC-C----------ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCc----
Confidence 443 1 235666665555566789999999999999999999999999999998832212111100
Q ss_pred hhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCC-eEEccC--ceeE--ECC-
Q 016069 235 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQ-IQVLPG--IESI--RGN- 308 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~~~--v~~~--~~~- 308 (396)
.++ +.....+.+.+++.+ |+++.+ +.++ +.+
T Consensus 211 --~~~-----------------------------------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~ 247 (369)
T 3d1c_A 211 --RLS-----------------------------------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ 247 (369)
T ss_dssp --SCC-----------------------------------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE
T ss_pred --cCC-----------------------------------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc
Confidence 001 111112235566675 999887 8888 444
Q ss_pred -eEEecCCcEEe-CcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc-------Cch
Q 016069 309 -EVIFENGHSHH-FDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY-------GAA 379 (396)
Q Consensus 309 -~v~~~~g~~~~-~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-------~a~ 379 (396)
.+.+.||+++. +|.||+|||++|++..+.. . . +.+++|++.++...+.++.|+|||+||++.... .+.
T Consensus 248 ~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~-~-~-~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~ 324 (369)
T 3d1c_A 248 YHISFDSGQSVHTPHEPILATGFDATKNPIVQ-Q-L-FVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFR 324 (369)
T ss_dssp EEEEESSSCCEEESSCCEECCCBCGGGSHHHH-H-H-SCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHG
T ss_pred eEEEecCCeEeccCCceEEeeccCCccchhhh-h-h-ccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhh
Confidence 36778998775 6999999999999854433 2 2 226788888886677889999999999976421 456
Q ss_pred HHHHHHHHHHhhhcC
Q 016069 380 ADAQNIADHINSILS 394 (396)
Q Consensus 380 ~~a~~~a~~i~~~l~ 394 (396)
.||+.+|++|.+.+.
T Consensus 325 ~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 325 ARFAVLAHLLTQREG 339 (369)
T ss_dssp GGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccC
Confidence 789999999988764
No 24
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.3e-34 Score=265.23 Aligned_cols=289 Identities=18% Similarity=0.268 Sum_probs=212.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++.|++|+|+|+. ..||.|..... ...++. ++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHHHH
Confidence 479999999999999999999999999999975 56776542210 001111 1112456788888
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.+.+.+++. +.++ |+.++... +.|.+ +.++ .++.||+||+|+| +.|..|.++|.+.+
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN--------GEYTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS--------CEEEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC--------CEEEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 888888888765 6665 88888754 67777 4443 6789999999999 67888888876654
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHH
Q 016069 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (396)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|++++|++... +. ..+
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~--~~~---------------- 186 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-AE--KIL---------------- 186 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-CC--HHH----------------
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-cC--HHH----------------
Confidence 333444433322223458999999999999999999999999999999987321 10 000
Q ss_pred HHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe-----EEecC----C
Q 016069 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFEN----G 315 (396)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~-----v~~~~----g 315 (396)
...+.+.+++.+|+++.+ +++++.+. +.+++ |
T Consensus 187 -------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g 229 (320)
T 1trb_A 187 -------------------------------------IKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSD 229 (320)
T ss_dssp -------------------------------------HHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCC
T ss_pred -------------------------------------HHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCC
Confidence 011235566789999887 88886553 77765 4
Q ss_pred --cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCC----CccCCCceEEEecccccc----cCchHHHHHH
Q 016069 316 --HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPN----HWKGKNGLYCVGLSRKGL----YGAAADAQNI 385 (396)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~vya~Gd~~~~~----~~a~~~a~~~ 385 (396)
+++++|.||+|+|++|++. ++. . ....+ +|++.++... +.|+.|+|||+|||+... ..|..+|+.+
T Consensus 230 ~~~~i~~D~vv~a~G~~p~~~-~~~-~-~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~a 305 (320)
T 1trb_A 230 NIESLDVAGLFVAIGHSPNTA-IFE-G-QLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMA 305 (320)
T ss_dssp CCEEEECSEEEECSCEEESCG-GGT-T-TSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHH
T ss_pred ceEEEEcCEEEEEeCCCCChH-Hhc-c-ccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHH
Confidence 5789999999999999984 444 2 33345 8888888543 478899999999998753 3788999999
Q ss_pred HHHHhhhcC
Q 016069 386 ADHINSILS 394 (396)
Q Consensus 386 a~~i~~~l~ 394 (396)
|.+|...|.
T Consensus 306 a~~i~~~l~ 314 (320)
T 1trb_A 306 ALDAERYLD 314 (320)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999998875
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.1e-34 Score=261.86 Aligned_cols=284 Identities=15% Similarity=0.235 Sum_probs=203.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
+|||+||||||||++||..|+++|++|+|||+.. .||.+..+ | +.+... .-....++.+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~--------------~~~~~~----~~~~~~~~~~~ 65 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-S--------------HGFITR----DGIKPEEFKEI 65 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-B--------------CCSTTC----TTBCHHHHHHH
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-c--------------CCccCC----CCCCHHHHHHH
Confidence 6999999999999999999999999999999875 44433211 1 111111 11355666666
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
..+.+.+++... +....+..+.... .+.|++.+.++ .+++||+||+||| ++|+.|++||.+.+
T Consensus 66 ~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g--------~~~~a~~liiATG--s~p~~p~i~G~~~~---- 128 (304)
T 4fk1_A 66 GLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH--------TKYLAERVLLATG--MQEEFPSIPNVREY---- 128 (304)
T ss_dssp HHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC--------CEEEEEEEEECCC--CEEECCSCTTHHHH----
T ss_pred HHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC--------CEEEeCEEEEccC--CccccccccCcccc----
Confidence 666565555443 5566666666543 46788888776 6899999999999 78999999998876
Q ss_pred CCCcceeeccCCCCCCCCCCCeEEEEcCCCC-HHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHH
Q 016069 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~-g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (396)
.+..++.+...+....++++++|||+|.. ++|++..+.+.+.+|+++.+.+. ..+
T Consensus 129 --~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~-~~~--------------------- 184 (304)
T 4fk1_A 129 --YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE-LSQ--------------------- 184 (304)
T ss_dssp --BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC-CCH---------------------
T ss_pred --ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc-chh---------------------
Confidence 55555555444444556788888888865 67888888888999999877652 110
Q ss_pred HHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC-----eEEecCCcEEe
Q 016069 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-----EVIFENGHSHH 319 (396)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~-----~v~~~~g~~~~ 319 (396)
...+.+++.+++++.+ +..+..+ .+.+++|++++
T Consensus 185 ----------------------------------------~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~ 224 (304)
T 4fk1_A 185 ----------------------------------------TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIE 224 (304)
T ss_dssp ----------------------------------------HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEEC
T ss_pred ----------------------------------------hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceee
Confidence 1124455566666666 5665543 47889999999
Q ss_pred CcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchHHHHHHHHHHhhhcC
Q 016069 320 FDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 320 ~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~~~l~ 394 (396)
+|.+++++|..|+... +. ..+..++++|++.+| +.+.|+.|+|||+|||+.. +..|..+|+.+|..|.++|.
T Consensus 225 ~~~~vi~~g~~~~~~~-~~-~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 225 RAGGFIVPTFFRPNQF-IE-QLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CCEEEECCEEECSSCH-HH-HTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecceeeeeccccCChh-hh-hcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9988888877776644 44 324557889999888 5677999999999999754 33788899999999988763
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=4.9e-33 Score=270.36 Aligned_cols=287 Identities=18% Similarity=0.263 Sum_probs=217.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
..+||+|||||++|+++|..|++.|++|+|+|+ ..||.|.... ....+. . ..+....++..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~-------------~~~~~~---~-~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV-------------DIENYI---S-VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS-------------CBCCBT---T-BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc-------------cccccC---C-CCCCCHHHHHH
Confidence 368999999999999999999999999999986 4677765321 000000 0 11246778889
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCC-CCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
++.+.++++++++ +.+++|++++.+.. .+.|.|.+.++ .+++||+||+||| +.|+.|.+||.+.+
T Consensus 272 ~l~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~V~~~~g--------~~~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVDV--IDSQSASKLVPAATEGGLHQIETASG--------AVLKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEEE--ECSCCEEEEECCSSTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EcCCEEEEEEeccCCCceEEEEECCC--------CEEEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 9998888888765 88889999986431 24688888765 5799999999999 56777888888766
Q ss_pred CCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHH
Q 016069 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (396)
.+..++.+...+...+.+++++|||+|.+|+|+|..|+..+.+|+++.|.+... +.
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-~~------------------- 393 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-AD------------------- 393 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-SC-------------------
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-cC-------------------
Confidence 555455554444444568999999999999999999999999999999887321 10
Q ss_pred HHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcC-CCeEEccC--ceeEECC-----eEEecC--
Q 016069 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN-- 314 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~~~--v~~~~~~-----~v~~~~-- 314 (396)
..+.+.+++ .+|+++.+ ++++..+ ++.+.+
T Consensus 394 ----------------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~ 433 (521)
T 1hyu_A 394 ----------------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV 433 (521)
T ss_dssp ----------------------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETT
T ss_pred ----------------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCC
Confidence 011244555 68999888 8888754 466654
Q ss_pred -Cc--EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc----cCchHHHHHHHH
Q 016069 315 -GH--SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIAD 387 (396)
Q Consensus 315 -g~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~ 387 (396)
|+ ++++|.|++|+|++||+. ++. . ...++++|++.++. ...|+.|+|||+|||+..+ ..|+.+|..+|.
T Consensus 434 ~g~~~~i~~D~vi~a~G~~pn~~-~l~-~-~l~~~~~G~I~Vd~-~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~ 509 (521)
T 1hyu_A 434 SGDIHSVALAGIFVQIGLLPNTH-WLE-G-ALERNRMGEIIIDA-KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASL 509 (521)
T ss_dssp TCCEEEEECSEEEECCCEEESCG-GGT-T-TSCBCTTSCBCCCT-TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEEcCEEEECcCCCCCch-HHh-h-hhccCCCCcEEeCC-CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHH
Confidence 54 689999999999999984 555 3 34467789998884 4568899999999998753 378999999999
Q ss_pred HHhhhc
Q 016069 388 HINSIL 393 (396)
Q Consensus 388 ~i~~~l 393 (396)
+|...|
T Consensus 510 ~i~~~L 515 (521)
T 1hyu_A 510 SAFDYL 515 (521)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998866
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.5e-34 Score=272.60 Aligned_cols=291 Identities=18% Similarity=0.240 Sum_probs=203.5
Q ss_pred eEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 9 EVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 9 ~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
+|+|||||+||+++|..|++.| .+|+|||+++..... .. -.+..+ ...............
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~-------~~--~l~~~~---~~~~~~~~~~~~~~~------ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA-------NC--ALPYVI---GEVVEDRRYALAYTP------ 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC-------GG--GHHHHH---TTSSCCGGGTBCCCH------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC-------cc--hhHHHH---cCCccchhhhhhcCH------
Confidence 6999999999999999999987 479999998754311 00 000000 000000000001111
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+...++.+++. +.+++|++++... .. +......+ ++. .++.||+||+||| ++|+.|++++...+
T Consensus 64 -~~~~~~~~i~~--~~~~~V~~id~~~--~~--~~~~~~~~-~~~--~~~~yd~lVIATG--s~p~~p~i~g~~~~---- 127 (437)
T 4eqs_A 64 -EKFYDRKQITV--KTYHEVIAINDER--QT--VSVLNRKT-NEQ--FEESYDKLILSPG--ASANSLGFESDITF---- 127 (437)
T ss_dssp -HHHHHHHCCEE--EETEEEEEEETTT--TE--EEEEETTT-TEE--EEEECSEEEECCC--EEECCCCCCCTTEE----
T ss_pred -HHHHHhcCCEE--EeCCeEEEEEccC--cE--EEEEeccC-Cce--EEEEcCEEEECCC--CccccccccCceEE----
Confidence 12344567666 8899999998754 44 33333222 222 6789999999999 78888888875443
Q ss_pred CCCcceeeccCCCC--CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHH
Q 016069 167 TGTGEVIHSTQYKN--GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (396)
Q Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (396)
....+..+...+ .....+++++|||+|.+|+|+|..+.+.|.+||++++++ .++|..+.+....
T Consensus 128 --~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~~~~~~----------- 193 (437)
T 4eqs_A 128 --TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDADMNQP----------- 193 (437)
T ss_dssp --CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCGGGGHH-----------
T ss_pred --eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccchhHHH-----------
Confidence 111111110000 011237899999999999999999999999999999998 5555554443333
Q ss_pred HHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCeEEecCCcEEeCcE
Q 016069 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDS 322 (396)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~v~~~~g~~~~~D~ 322 (396)
+.+.+++.+|+++.+ +++++.+.+.+++|+++++|.
T Consensus 194 ------------------------------------------~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~ 231 (437)
T 4eqs_A 194 ------------------------------------------ILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDM 231 (437)
T ss_dssp ------------------------------------------HHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSE
T ss_pred ------------------------------------------HHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeee
Confidence 345677788999888 999999999999999999999
Q ss_pred EEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc-------------cCchHHHHHHHHHH
Q 016069 323 IVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAADAQNIADHI 389 (396)
Q Consensus 323 vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~a~~~a~~i 389 (396)
|++|+|++||+. +++ ..+...+++|++.+| +.+.|+.|+|||+|||+..+ ..|.+||+.+|+||
T Consensus 232 vl~a~G~~Pn~~-~~~-~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni 308 (437)
T 4eqs_A 232 IIEGVGTHPNSK-FIE-SSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQI 308 (437)
T ss_dssp EEECCCEEESCG-GGT-TSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHH
T ss_pred EEEEeceecCcH-HHH-hhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHH
Confidence 999999999984 555 435567889999888 45678999999999997542 25789999999999
Q ss_pred hhh
Q 016069 390 NSI 392 (396)
Q Consensus 390 ~~~ 392 (396)
.+.
T Consensus 309 ~g~ 311 (437)
T 4eqs_A 309 AGN 311 (437)
T ss_dssp HSC
T ss_pred cCC
Confidence 864
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.7e-33 Score=268.31 Aligned_cols=285 Identities=13% Similarity=0.149 Sum_probs=199.8
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
+||+|||||++|+++|..|++. +.+|+|||+.+..|..... +. .+.. ..+....++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-----~~--------~~~~-------~~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-----LS--------AYFN-------HTINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-----ch--------hhhc-------CCCCCHHHhhc
Confidence 6999999999999999999998 8899999999866511000 00 0000 00001111111
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.....+.++++++ +++++|++++.+. +.+.+.... .. ..+.||++|+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~v~~~~-~~------~~~~~d~lviAtG--~~p~~p~i~g~~~~--- 126 (452)
T 3oc4_A 63 ITEEELRRQKIQL--LLNREVVAMDVEN--QLIAWTRKE-EQ------QWYSYDKLILATG--ASQFSTQIRGSQTE--- 126 (452)
T ss_dssp CCHHHHHHTTEEE--ECSCEEEEEETTT--TEEEEEETT-EE------EEEECSEEEECCC--CCBCCCCCBTTTCT---
T ss_pred CCHHHHHHCCCEE--EECCEEEEEECCC--CEEEEEecC-ce------EEEEcCEEEECCC--cccCCCCCCCCCCC---
Confidence 1223345566555 8899999998765 666554111 11 6799999999999 78999988887643
Q ss_pred CCCCcceeeccCCCCCCC-----CCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhhcCC
Q 016069 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVP 239 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-----~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~ 239 (396)
..++...+.+... ..+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..++. .+.++...
T Consensus 127 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~~~~~~------ 194 (452)
T 3oc4_A 127 -----KLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDKEMVAE------ 194 (452)
T ss_dssp -----TEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCHHHHHH------
T ss_pred -----CEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCHHHHHH------
Confidence 3444443333222 247999999999999999999999999999999998 44443 33333222
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE--CCe--EEec
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GNE--VIFE 313 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~--~~~--v~~~ 313 (396)
+.+.+++.+|+++.+ +++++ .+. +.++
T Consensus 195 -----------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 227 (452)
T 3oc4_A 195 -----------------------------------------------VQKSLEKQAVIFHFEETVLGIEETANGIVLETS 227 (452)
T ss_dssp -----------------------------------------------HHHHHHTTTEEEEETCCEEEEEECSSCEEEEES
T ss_pred -----------------------------------------------HHHHHHHcCCEEEeCCEEEEEEccCCeEEEEEC
Confidence 245677789999987 88887 233 5555
Q ss_pred CCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc-------------cCchH
Q 016069 314 NGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAA 380 (396)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~ 380 (396)
+| ++++|.||+|+|++|++. ++. . ...++++|.+.+| ..+.|+.|+|||+|||+... ..|..
T Consensus 228 ~g-~i~aD~Vv~A~G~~p~~~-~l~-~-~~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~ 302 (452)
T 3oc4_A 228 EQ-EISCDSGIFALNLHPQLA-YLD-K-KIQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVR 302 (452)
T ss_dssp SC-EEEESEEEECSCCBCCCS-SCC-T-TSCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHH
T ss_pred CC-EEEeCEEEECcCCCCChH-HHH-h-hhccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHH
Confidence 55 899999999999999995 444 3 3456788999888 45678899999999998642 26899
Q ss_pred HHHHHHHHHhhh
Q 016069 381 DAQNIADHINSI 392 (396)
Q Consensus 381 ~a~~~a~~i~~~ 392 (396)
||+.+|++|.+.
T Consensus 303 ~g~~aa~~i~g~ 314 (452)
T 3oc4_A 303 TGLVVANNLEEK 314 (452)
T ss_dssp HHHHHTTSSSSC
T ss_pred HHHHHHHHhcCC
Confidence 999999998764
No 29
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4.8e-33 Score=268.95 Aligned_cols=306 Identities=16% Similarity=0.153 Sum_probs=204.9
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEe--------cCCCCCccccc-CCcCceeeccccc----cccCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie--------~~~~~gg~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (396)
++||+|||||++|+++|..|++ .|.+|+||| ++..+||+|.. .++|...+..... +.....+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5899999999999999999999 999999999 35678887753 2222211100000 00000111100
Q ss_pred CCC-CCCCHHHHHHHHHH-----------HHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeec-C-CCCceeeEEEE
Q 016069 73 SYP-MFVSRAQFIEYLDH-----------YVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNL-L-SPGRVIEEYYS 137 (396)
Q Consensus 73 ~~~-~~~~~~~~~~~l~~-----------~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~-~-~~g~~~~~~~~ 137 (396)
... ...+..++.++..+ .+++. +++. +.+ .++.++ . . +|.+.+. . ..+.. ..+.
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g-~~~~i~--~--~--~v~v~~~~~~~~~~~--~~~~ 155 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF--FLG-WGSLES--K--N--VVVVRETADPKSAVK--ERLQ 155 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE--EES-EEEEEE--T--T--EEEEESSSSTTSCEE--EEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--EEe-EEEEee--C--C--EEEEeecCCccCCCC--eEEE
Confidence 000 01233344433332 23344 5553 444 355543 1 2 3555411 0 00001 6799
Q ss_pred eCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhh---cCceEE
Q 016069 138 GRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSL 214 (396)
Q Consensus 138 ~d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~---g~~v~~ 214 (396)
||+||+||| +.|..|+++|.+.. ++..++..... .+++++|||+|.+|+|+|..|.+. |.+|++
T Consensus 156 ~d~lViATG--s~p~~p~i~G~~~~----------~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 156 ADHILLATG--SWPQMPAIPGIEHC----------ISSNEAFYLPE-PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp EEEEEECCC--EEECCCCCTTGGGC----------EEHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred cCEEEEeCC--CCcCCCCCCCcccc----------ccHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 999999999 78888888887432 34444433333 378999999999999999999999 999999
Q ss_pred EEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCC
Q 016069 215 VIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSG 294 (396)
Q Consensus 215 ~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (396)
+++.+ .++|..+.++...+ .+.+++.
T Consensus 223 v~~~~-~~l~~~d~~~~~~l-----------------------------------------------------~~~l~~~ 248 (495)
T 2wpf_A 223 CYRNN-LILRGFDETIREEV-----------------------------------------------------TKQLTAN 248 (495)
T ss_dssp EESSS-SSCTTSCHHHHHHH-----------------------------------------------------HHHHHHT
T ss_pred EEcCC-ccccccCHHHHHHH-----------------------------------------------------HHHHHhC
Confidence 99998 55665544433322 3556778
Q ss_pred CeEEccC--ceeEECC-----eEEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceE
Q 016069 295 QIQVLPG--IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLY 366 (396)
Q Consensus 295 ~i~v~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vy 366 (396)
+|+++.+ +++++.+ .+.+++|+++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+||
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~-~~gl~~~~~G~i~Vd~-~~~t~~~~Iy 326 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLG-NVGVKLTPKGGVQVDE-FSRTNVPNIY 326 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGG-GTTCCBCTTSSBCCCT-TCBCSSTTEE
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchh-hcCccCCCCCCEEECC-CCccCCCCEE
Confidence 8999887 8888643 3777899999999999999999999644 44 3344567789888884 4568999999
Q ss_pred EEeccccccc---CchHHHHHHHHHHhhh
Q 016069 367 CVGLSRKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 367 a~Gd~~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
|+|||+..+. .|..||+.+|.+|.+.
T Consensus 327 A~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 327 AIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp ECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999987533 7899999999999863
No 30
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-34 Score=273.74 Aligned_cols=308 Identities=16% Similarity=0.192 Sum_probs=203.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeec-ccc---ccccCCCCCCCCC--
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLH-LAK---QFCQLPHLPFPSS-- 73 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~-~~~---~~~~~~~~~~~~~-- 73 (396)
|+.+..++||+|||||++|+++|..|++.|.+|+|||+. ..||+|.. .+.|...+. ... .+.....+.+...
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 443334689999999999999999999999999999997 67887752 111111000 000 0000001100000
Q ss_pred --C-CCCCCHHHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeC
Q 016069 74 --Y-PMFVSRAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (396)
Q Consensus 74 --~-~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d 139 (396)
. ....+...+.+ .+....+..+++. +.+ .++.++ . ..+.+.+.++.. .++.||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~--~--~~~~v~~~~g~~------~~~~~d 150 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDV--VFG-WARFNK--D--GNVEVQKRDNTT------EVYSAN 150 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEE-EEEECT--T--SCEEEEESSSCC------EEEEEE
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEee--C--CEEEEEeCCCcE------EEEEeC
Confidence 0 01122223322 2233344455543 444 355442 2 456676655421 479999
Q ss_pred EEEEeecCCCCCCCC-CCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEec
Q 016069 140 FLVVASGETSNPFTP-DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (396)
Q Consensus 140 ~vviAtG~~s~p~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~ 218 (396)
+||+||| +.|..| +++|.+.. +++.++..... .+++++|||+|.+|+|+|..|.+.|.+|+++.+.
T Consensus 151 ~lviAtG--s~p~~p~~i~g~~~~----------~~~~~~~~l~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 151 HILVATG--GKAIFPENIPGFELG----------TDSDGFFRLEE-QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp EEEECCC--EEECCCTTSTTGGGS----------BCHHHHHHCSS-CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEcCC--CCCCCCCCCCCcccc----------cchHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999 788888 88876432 22222222222 3789999999999999999999999999999999
Q ss_pred CceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEE
Q 016069 219 PVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQV 298 (396)
Q Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 298 (396)
+ .++|..+.++...+ .+.+++.+|++
T Consensus 218 ~-~~l~~~d~~~~~~l-----------------------------------------------------~~~l~~~Gv~i 243 (479)
T 2hqm_A 218 E-TVLRKFDECIQNTI-----------------------------------------------------TDHYVKEGINV 243 (479)
T ss_dssp S-SSCTTSCHHHHHHH-----------------------------------------------------HHHHHHHTCEE
T ss_pred C-ccccccCHHHHHHH-----------------------------------------------------HHHHHhCCeEE
Confidence 8 55555444333322 34566678999
Q ss_pred ccC--ceeEECC------eEEecCC-cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEE
Q 016069 299 LPG--IESIRGN------EVIFENG-HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCV 368 (396)
Q Consensus 299 ~~~--v~~~~~~------~v~~~~g-~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~ 368 (396)
+.+ +++++.+ .+.+++| +++++|.||+|+|++|++ .+ ++ ..+..++++|.+.+|. .+.|+.|+|||+
T Consensus 244 ~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~-~~gl~~~~~G~i~vd~-~~~t~~~~IyA~ 320 (479)
T 2hqm_A 244 HKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSE-NVGIKLNSHDQIIADE-YQNTNVPNIYSL 320 (479)
T ss_dssp ECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGG-GGTCCBCTTSCBCCCT-TCBCSSTTEEEC
T ss_pred EeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChh-hcCceECCCCCEeECC-CCccCCCCEEEE
Confidence 887 8888642 3677888 789999999999999999 55 45 4344567789888884 457899999999
Q ss_pred eccccccc---CchHHHHHHHHHHhhh
Q 016069 369 GLSRKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 369 Gd~~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
|||+..+. .|..||+.+|.+|.+.
T Consensus 321 GD~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 321 GDVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp GGGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred EecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 99976533 7899999999999864
No 31
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.1e-33 Score=273.59 Aligned_cols=288 Identities=19% Similarity=0.244 Sum_probs=199.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC---CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g---~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
++||+|||||++|+++|..|++.| .+|+|||+.+..+..+.. +...... ....+. ++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~------~~~~~~---------~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGE------QIAGPE---------GL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTT------SSSCSG---------GG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcC------ccCCHH---------Hh
Confidence 489999999999999999999987 999999998755422110 0000000 000000 00
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcc---
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLS--- 160 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~--- 160 (396)
.....+.+++.++++ +.+++|+.++.++ +.+.+.. ++.. .++.||+||+||| ++|..|+++|.+
T Consensus 95 ~~~~~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~-~g~~------~~~~~d~lviAtG--~~p~~p~i~G~~~~~ 161 (490)
T 2bc0_A 95 FYSDKEELESLGAKV--YMESPVQSIDYDA--KTVTALV-DGKN------HVETYDKLIFATG--SQPILPPIKGAEIKE 161 (490)
T ss_dssp BSCCHHHHHHTTCEE--ETTCCEEEEETTT--TEEEEEE-TTEE------EEEECSEEEECCC--EEECCCSCBTCCBCT
T ss_pred hhcCHHHHHhCCCEE--EeCCEEEEEECCC--CEEEEEe-CCcE------EEEECCEEEECCC--CCcCCCCCCCccccc
Confidence 001122344567665 7899999998754 5544432 3211 6799999999999 788888888876
Q ss_pred ---ccccCCCCCc---ceeeccCCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeee-hh
Q 016069 161 ---SFCSSATGTG---EVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS-RE 226 (396)
Q Consensus 161 ---~~~~~~~~~~---~~~~~~~~~~-------~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p-~~ 226 (396)
.| .+ ..++...+.+ .....+++++|||+|.+|+|+|..|++.|.+|+++++.+ .+++ ..
T Consensus 162 ~~~~f------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 234 (490)
T 2bc0_A 162 GSLEF------EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYY 234 (490)
T ss_dssp TCTTC------CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTS
T ss_pred ccccc------ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHH
Confidence 22 11 2333222111 111348999999999999999999999999999999998 4444 22
Q ss_pred hhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--cee
Q 016069 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (396)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~ 304 (396)
+.++... +.+.+++.+|+++.+ +++
T Consensus 235 ~~~~~~~-----------------------------------------------------l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 235 DRDLTDL-----------------------------------------------------MAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp CHHHHHH-----------------------------------------------------HHHHHHTTTCEEEETCCEEE
T ss_pred HHHHHHH-----------------------------------------------------HHHHHHhCCeEEEeCCEEEE
Confidence 2222221 245677789999887 888
Q ss_pred EECCe----EEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc------
Q 016069 305 IRGNE----VIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------ 374 (396)
Q Consensus 305 ~~~~~----v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------ 374 (396)
++.++ +.+ +|+++++|.||+|+|++|++. +++ . ...++++|++.+|. .+.|+.|+|||+|||+..
T Consensus 262 i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~-ll~-~-~l~~~~~G~I~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g 336 (490)
T 2bc0_A 262 VAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT-LGN-G-KIDLFRNGAFLVNK-RQETSIPGVYAIGDCATIYDNATR 336 (490)
T ss_dssp EECSSSCCEEEE-SSCEEECSEEEECCCEEECCG-GGT-T-CSCBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEETTTT
T ss_pred EEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH-HHH-h-hhccCCCCCEEECC-CcccCCCCEEEeeeeEEeccccCC
Confidence 87653 444 788999999999999999995 455 4 34456789888884 566799999999999863
Q ss_pred -------ccCchHHHHHHHHHHhhh
Q 016069 375 -------LYGAAADAQNIADHINSI 392 (396)
Q Consensus 375 -------~~~a~~~a~~~a~~i~~~ 392 (396)
...|..||+.+|.+|.+.
T Consensus 337 ~~~~~~~~~~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 337 DTNYIALASNAVRTGIVAAHNACGT 361 (490)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred ceeecccHHHHHHHHHHHHHHhcCC
Confidence 237899999999999864
No 32
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=5e-33 Score=267.34 Aligned_cols=294 Identities=13% Similarity=0.113 Sum_probs=198.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecccc----ccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|.. .+.|...+.... .+...... .......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 589999999999999999999999999999999999998763 222211100000 00000000 1112222
Q ss_pred HHH------------HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 82 QFI------------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 82 ~~~------------~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.+. .++....++.+++. +. ..+..++. ..+.|.+.++.. .++.||+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~-g~v~~id~----~~~~V~~~~g~~------~~~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTF--YK-GYVKIKDP----THVIVKTDEGKE------IEAETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEE--ES-EEEEEEET----TEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEE--EE-eEEEEecC----CeEEEEcCCCcE------EEEecCEEEECCC--C
Confidence 222 22222233334442 33 36666652 566677765411 3499999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeeccCCC---CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh
Q 016069 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (396)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (396)
.|..|+++|.+.+ ++..++. ......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|..
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 211 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITL 211 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCC
Confidence 8999999887633 2222222 1112247899999999999999999999999999999988 555554
Q ss_pred -hhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ce
Q 016069 227 -MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IE 303 (396)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~ 303 (396)
+.++...+ .+.++ |+++.+ ++
T Consensus 212 ~d~~~~~~l-----------------------------------------------------~~~l~---v~i~~~~~v~ 235 (466)
T 3l8k_A 212 EDQDIVNTL-----------------------------------------------------LSILK---LNIKFNSPVT 235 (466)
T ss_dssp CCHHHHHHH-----------------------------------------------------HHHHC---CCEECSCCEE
T ss_pred CCHHHHHHH-----------------------------------------------------HhcCE---EEEEECCEEE
Confidence 44433332 12232 666665 77
Q ss_pred eEEC---Ce--EEec--CCc--EEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc
Q 016069 304 SIRG---NE--VIFE--NGH--SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 373 (396)
Q Consensus 304 ~~~~---~~--v~~~--~g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 373 (396)
+++. ++ +.++ +|+ ++++|.||+|+|++|++. + ++ ..+..++++| +.+| ..+.|+.|+|||+|||+.
T Consensus 236 ~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~-~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 236 EVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAR-EIGLSISKTG-IVVD-ETMKTNIPNVFATGDANG 311 (466)
T ss_dssp EEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTG-GGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTC
T ss_pred EEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchh-hcCceeCCCC-EeEC-CCccCCCCCEEEEEecCC
Confidence 7765 33 5666 666 789999999999999997 4 44 4345567888 8877 556679999999999987
Q ss_pred cc---cCchHHHHHHHHHHhhh
Q 016069 374 GL---YGAAADAQNIADHINSI 392 (396)
Q Consensus 374 ~~---~~a~~~a~~~a~~i~~~ 392 (396)
.+ ..|..||+.+|.+|.+.
T Consensus 312 ~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 312 LAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp SCCSHHHHHHHHHHHHHHHHTT
T ss_pred CCccHhHHHHHHHHHHHHHhCC
Confidence 53 37899999999999864
No 33
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=6.9e-33 Score=267.15 Aligned_cols=305 Identities=13% Similarity=0.118 Sum_probs=206.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeeccccc----cc--cCCCCCCCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FC--QLPHLPFPSSYPMFVS 79 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~ 79 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|... +.|...+..... +. .+..+..+.. ....+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCccC
Confidence 5899999999999999999999999999999998899987532 111110000000 00 0000000000 00012
Q ss_pred HHHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCC
Q 016069 80 RAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGET 148 (396)
Q Consensus 80 ~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~ 148 (396)
...+.. .+...+++.++++ +.++. ..++ . +.+.|.+.++ +. .+++||+||+|||
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~-~~~~--~--~~~~v~~~~g---g~---~~~~~d~lViAtG-- 149 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYG-KITG--K--NQVTATKADG---GT---QVIDTKNILIATG-- 149 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEE-EEEE--T--TEEEEECTTS---CE---EEEEEEEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEE-EEec--C--CEEEEEecCC---Cc---EEEEeCEEEECCC--
Confidence 222222 2244455667664 66553 3332 2 5566766542 11 5799999999999
Q ss_pred CCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeee-hhh
Q 016069 149 SNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS-REM 227 (396)
Q Consensus 149 s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p-~~~ 227 (396)
+.|..|+++|.+.. ..+++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++++ .++| ..+
T Consensus 150 s~p~~p~i~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~ 219 (474)
T 1zmd_A 150 SEVTPFPGITIDED--------TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGID 219 (474)
T ss_dssp EEECCCTTCCCCSS--------SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCC
T ss_pred CCCCCCCCCCCCcC--------cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccC
Confidence 78888888876542 2455554444333 37999999999999999999999999999999998 5555 433
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeE
Q 016069 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~ 305 (396)
.++... +.+.+++.+|+++.+ ++++
T Consensus 220 ~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i 246 (474)
T 1zmd_A 220 MEISKN-----------------------------------------------------FQRILQKQGFKFKLNTKVTGA 246 (474)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCceEEEE
Confidence 333322 235566788999887 8888
Q ss_pred ECC--e-EEe-------cCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc
Q 016069 306 RGN--E-VIF-------ENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG 374 (396)
Q Consensus 306 ~~~--~-v~~-------~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~ 374 (396)
+.+ + +.+ .+++++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..
T Consensus 247 ~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~ 324 (474)
T 1zmd_A 247 TKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLE-ELGIELDPRGRIPVNT-RFQTKIPNIYAIGDVVAG 324 (474)
T ss_dssp EECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHH-HHTCCCCTTSCCCCCT-TCBCSSTTEEECGGGSSS
T ss_pred EEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCch-hcCCccCCCCCEEECc-CCccCCCCEEEeeecCCC
Confidence 643 2 433 356789999999999999999653 33 2233456788888884 466899999999999876
Q ss_pred cc---CchHHHHHHHHHHhhh
Q 016069 375 LY---GAAADAQNIADHINSI 392 (396)
Q Consensus 375 ~~---~a~~~a~~~a~~i~~~ 392 (396)
+. .|..||+.+|.+|.+.
T Consensus 325 ~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 325 PMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHHhcCC
Confidence 43 7899999999999864
No 34
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.5e-33 Score=267.23 Aligned_cols=307 Identities=12% Similarity=0.120 Sum_probs=207.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeecccc----c----c--ccCCCCCCCCCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----Q----F--CQLPHLPFPSSY 74 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~~----~----~--~~~~~~~~~~~~ 74 (396)
.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+...+.... . + +.+........+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 46899999999999999999999999999999998889877531 11110000000 0 0 000000000000
Q ss_pred CCCC-CHH----HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 75 PMFV-SRA----QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 75 ~~~~-~~~----~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
..+. ... .+...+...+++.++++ +.++.+. ++ . +.+.|.+.++.. .+++||+||+||| +
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~~--~--~~~~v~~~~G~~------~~i~~d~lIiAtG--s 149 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKF-VS--P--SEISVDTIEGEN------TVVKGKHIIIATG--S 149 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEE-EE--T--TEEEECCSSSCC------EEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-ec--C--CEEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 0000 011 12233445556667665 7776553 32 2 556666554321 5799999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhH
Q 016069 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (396)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (396)
.|..|+++|.+.. ..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+.+
T Consensus 150 ~p~~p~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~~ 219 (470)
T 1dxl_A 150 DVKSLPGVTIDEK--------KIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDAE 219 (470)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCcc--------cEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccHH
Confidence 8888887776532 2445444444333 37999999999999999999999999999999998 555544443
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~ 307 (396)
+... +.+.+++.+|+++.+ +.+++.
T Consensus 220 ~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 220 IRKQ-----------------------------------------------------FQRSLEKQGMKFKLKTKVVGVDT 246 (470)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHSSCCEECSEEEEEEEC
T ss_pred HHHH-----------------------------------------------------HHHHHHHcCCEEEeCCEEEEEEE
Confidence 3322 235566778999887 888876
Q ss_pred Ce----EEec---CC--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc-
Q 016069 308 NE----VIFE---NG--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY- 376 (396)
Q Consensus 308 ~~----v~~~---~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~- 376 (396)
++ +.++ +| +++++|.||+|+|++||+..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+.
T Consensus 247 ~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~-~~gl~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~ 324 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLD-KIGVETDKLGRILVNE-RFSTNVSGVYAIGDVIPGPML 324 (470)
T ss_dssp SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCT-TTTCCBCSSSCBCCCT-TCBCSSTTEEECSTTSSSCCC
T ss_pred cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCch-hcCCccCCCCCEeECc-CCccCCCCEEEEeccCCCCcc
Confidence 42 4444 55 678999999999999999553 34 3234456788888884 46689999999999987633
Q ss_pred --CchHHHHHHHHHHhhh
Q 016069 377 --GAAADAQNIADHINSI 392 (396)
Q Consensus 377 --~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|.+|.+.
T Consensus 325 ~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 325 AHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp HHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 7889999999999864
No 35
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.3e-33 Score=268.87 Aligned_cols=303 Identities=16% Similarity=0.176 Sum_probs=211.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeec-cccc---cccCCCCC-CCCCCCCCCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLH-LAKQ---FCQLPHLP-FPSSYPMFVS 79 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~-~~~~---~~~~~~~~-~~~~~~~~~~ 79 (396)
.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+...+. .... +.....+. ++.....+++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 35899999999999999999999999999999998788876531 11111100 0000 00001111 1112222344
Q ss_pred HHHHHHHHH-------HHH-----HhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016069 80 RAQFIEYLD-------HYV-----SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (396)
Q Consensus 80 ~~~~~~~l~-------~~~-----~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~ 147 (396)
..++.+++. ... ++.+++. +++..++.++. . .|.+. + ..+.||+||+|||
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~----~--~v~~~-g--------~~~~~d~lViATG- 183 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN----H--TVEAA-G--------KVFKAKNLILAVG- 183 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET----T--EEEET-T--------EEEEBSCEEECCC-
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC----C--EEEEC-C--------EEEEeCEEEECCC-
Confidence 666766654 233 5566664 54777777652 2 25554 3 6799999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCcceeeccCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh
Q 016069 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (396)
Q Consensus 148 ~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (396)
+.|..|+++|.+.. .+++..++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+|..
T Consensus 184 -s~p~~p~i~G~~~~--------~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~ 253 (523)
T 1mo9_A 184 -AGPGTLDVPGVNAK--------GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIK 253 (523)
T ss_dssp -EECCCCCSTTTTSB--------TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCC
T ss_pred -CCCCCCCCCCcccC--------cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccc
Confidence 78999988887642 244544443 3333334999999999999999999999999999999988 444443
Q ss_pred hhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--cee
Q 016069 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (396)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~ 304 (396)
+.++... +.+.+++.+|+++.+ |++
T Consensus 254 ~~~~~~~-----------------------------------------------------l~~~l~~~GV~i~~~~~V~~ 280 (523)
T 1mo9_A 254 DNETRAY-----------------------------------------------------VLDRMKEQGMEIISGSNVTR 280 (523)
T ss_dssp SHHHHHH-----------------------------------------------------HHHHHHHTTCEEESSCEEEE
T ss_pred cHHHHHH-----------------------------------------------------HHHHHHhCCcEEEECCEEEE
Confidence 3332222 245567789999887 888
Q ss_pred EEC--Ce------EEecCCc-EEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc
Q 016069 305 IRG--NE------VIFENGH-SHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL 375 (396)
Q Consensus 305 ~~~--~~------v~~~~g~-~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~ 375 (396)
++. ++ |.+++|+ ++++|.||+|+|++|++..+++ ..+..++++|++.+| ..+.|+.|+|||+|||+..+
T Consensus 281 i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~-~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~ 358 (523)
T 1mo9_A 281 IEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAK-ILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGP 358 (523)
T ss_dssp EEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHH-HHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSS
T ss_pred EEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHH-HcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCc
Confidence 864 33 5667887 8999999999999999852333 323446678988888 45668999999999998763
Q ss_pred ---cCchHHHHHHHHHHhh
Q 016069 376 ---YGAAADAQNIADHINS 391 (396)
Q Consensus 376 ---~~a~~~a~~~a~~i~~ 391 (396)
..|..||+.+|.+|.+
T Consensus 359 ~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 359 MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CSHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHcC
Confidence 3789999999999986
No 36
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.2e-33 Score=270.50 Aligned_cols=296 Identities=13% Similarity=0.149 Sum_probs=192.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
++||+|||||++|+++|..|++. +.+|+|||+.+..+ |.....+. ... . ........++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~-------g-~~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVS-------G-EVSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhc-------C-CCCchHHhccccchhc
Confidence 47999999999999999999998 89999999988654 11100000 000 0 0000000001111244
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe-ecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~ 163 (396)
.+...+.++.++.. +++++|++++... ..+.+... ++ +. ..+.||+||+||| +.|..|+++|.+..
T Consensus 70 ~~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~~~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~- 136 (472)
T 3iwa_A 70 RDPEFFRINKDVEA--LVETRAHAIDRAA--HTVEIENLRTG----ER--RTLKYDKLVLALG--SKANRPPVEGMDLA- 136 (472)
T ss_dssp -----------CEE--ECSEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCSCTTTTSB-
T ss_pred cCHHHHhhhcCcEE--EECCEEEEEECCC--CEEEEeecCCC----CE--EEEECCEEEEeCC--CCcCCCCCCCCCCC-
Confidence 55556565667665 8999999998765 55444431 12 11 5799999999999 78888888887632
Q ss_pred cCCCCCcceeeccCCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhh-cCceEEEEecCceeee-hhhhHHHHHH
Q 016069 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPVHVLS-REMVYLGLVL 234 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~i~VvG~G~~g~e~a~~l~~~-g~~v~~~~r~~~~~~p-~~~~~~~~~~ 234 (396)
..++.....+ .....+++++|||+|.+|+|+|..+.+. |.+|+++.+.+ ..+| ..+..+...
T Consensus 137 -------~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~- 207 (472)
T 3iwa_A 137 -------GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSKSLSQM- 207 (472)
T ss_dssp -------TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCHHHHHH-
T ss_pred -------CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCHHHHHH-
Confidence 2232222111 1112378999999999999999999999 99999999988 4555 333322222
Q ss_pred hhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC-Ce--
Q 016069 235 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG-NE-- 309 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~-~~-- 309 (396)
+.+.+++.+|+++.+ +++++. ++
T Consensus 208 ----------------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v 235 (472)
T 3iwa_A 208 ----------------------------------------------------LRHDLEKNDVVVHTGEKVVRLEGENGKV 235 (472)
T ss_dssp ----------------------------------------------------HHHHHHHTTCEEECSCCEEEEEESSSBE
T ss_pred ----------------------------------------------------HHHHHHhcCCEEEeCCEEEEEEccCCeE
Confidence 245567789999887 888875 32
Q ss_pred -EEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc-------c------c
Q 016069 310 -VIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G------L 375 (396)
Q Consensus 310 -v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~------~ 375 (396)
+.+++|+++++|.||+|+|+.|++. ++. ..+..++++|.+.+| ..+.|+.|+|||+|||+. . .
T Consensus 236 ~v~~~~g~~i~aD~Vv~a~G~~p~~~-l~~-~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~ 312 (472)
T 3iwa_A 236 ARVITDKRTLDADLVILAAGVSPNTQ-LAR-DAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLG 312 (472)
T ss_dssp EEEEESSCEEECSEEEECSCEEECCH-HHH-HHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCT
T ss_pred EEEEeCCCEEEcCEEEECCCCCcCHH-HHH-hCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchH
Confidence 6778999999999999999999985 444 324456778988888 456688999999999973 1 2
Q ss_pred cCchHHHHHHHHHHhhh
Q 016069 376 YGAAADAQNIADHINSI 392 (396)
Q Consensus 376 ~~a~~~a~~~a~~i~~~ 392 (396)
..|..||+.+|++|.+.
T Consensus 313 ~~A~~~g~~aa~~i~g~ 329 (472)
T 3iwa_A 313 SMANRQGRVIGTNLADG 329 (472)
T ss_dssp THHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 36889999999999864
No 37
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-33 Score=272.42 Aligned_cols=306 Identities=18% Similarity=0.213 Sum_probs=199.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecccccccc-----CCCCCCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFCQ-----LPHLPFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|.. .++|...+......+. +..+....... ....
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP-KLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-EECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-ccCH
Confidence 589999999999999999999999999999998899997653 2222211110000000 00000000000 0122
Q ss_pred HHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 81 AQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 81 ~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
..+.. .+....+..+++. +.+. +..+ + ...+.|.+.++ +. .++.||+||+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~--~--~~~~~v~~~~g----~~--~~~~~d~lViATG--s 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQGT-GKVL--G--QGKVSVTNEKG----EE--QVLEAKNVVIATG--S 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEC--S--SSEEEEECTTS----CE--EEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe--c--CCEEEEEeCCC----ce--EEEEeCEEEEccC--C
Confidence 22222 2233344456553 3333 3222 2 25566665443 21 6799999999999 5
Q ss_pred CCCCCCCCCccc-cccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhh
Q 016069 150 NPFTPDIRGLSS-FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV 228 (396)
Q Consensus 150 ~p~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~ 228 (396)
.| +.+||.+. + .+..+++..........+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+.
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~ 239 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG 239 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH
Confidence 54 34566542 1 222233332222233348999999999999999999999999999999988 55554444
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE
Q 016069 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~ 306 (396)
++... +.+.+++.+|+++.+ +.+++
T Consensus 240 ~~~~~-----------------------------------------------------l~~~l~~~gV~v~~~~~v~~i~ 266 (491)
T 3urh_A 240 EVAKQ-----------------------------------------------------LQRMLTKQGIDFKLGAKVTGAV 266 (491)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHhCCCEEEECCeEEEEE
Confidence 33332 235567789999887 77776
Q ss_pred CC--e--EEecC---C--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc
Q 016069 307 GN--E--VIFEN---G--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY 376 (396)
Q Consensus 307 ~~--~--v~~~~---g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~ 376 (396)
.+ . +.+++ | +++++|.||+|+|++|++..+ +. ..+..++++|++.+| ..+.|+.|+|||+|||+..+.
T Consensus 267 ~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~ 344 (491)
T 3urh_A 267 KSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLA-KAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPM 344 (491)
T ss_dssp EETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHH-HHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCC
T ss_pred EeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCch-hcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCcc
Confidence 43 2 55553 5 578999999999999999654 33 324456788999888 446689999999999986643
Q ss_pred ---CchHHHHHHHHHHhhh
Q 016069 377 ---GAAADAQNIADHINSI 392 (396)
Q Consensus 377 ---~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|++|.+.
T Consensus 345 ~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 345 LAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp CHHHHHHHHHHHHHHHTTS
T ss_pred chhHHHHHHHHHHHHHcCC
Confidence 8899999999999874
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.1e-33 Score=279.75 Aligned_cols=291 Identities=16% Similarity=0.263 Sum_probs=210.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
+++|+|||||++|+++|..|++. +.+|+|||+.+..+ |.... .+.. .... .......+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~--lp~~---~~g~-------~~~~~~~~~ 96 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCG--LPYY---IGGV-------ITERQKLLV 96 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGG--HHHH---HTTS-------SCCGGGGBS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCC--Cchh---hcCc-------CCChHHhhc
Confidence 57999999999999999999998 88999999988654 11000 0000 0000 001122234
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
.++..+.+++++.+ +++++|++++.+. +.+.+..... |+. ..+.||+||+||| +.|..|+++|.+..
T Consensus 97 ~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~-- 163 (588)
T 3ics_A 97 QTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTT---NET--YNEAYDVLILSPG--AKPIVPSIPGIEEA-- 163 (588)
T ss_dssp SCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTTC--
T ss_pred cCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCC---CCE--EEEeCCEEEECCC--CCCCCCCCCCcccC--
Confidence 55666777778776 8999999998765 5555543211 121 4789999999999 78888999887332
Q ss_pred CCCCCcceeeccCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhc
Q 016069 165 SATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRY 237 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-------~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~ 237 (396)
. ..++.....+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+|..+..+...
T Consensus 164 ----~-~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~---- 233 (588)
T 3ics_A 164 ----K-ALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDYEMAAY---- 233 (588)
T ss_dssp ----T-TEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHH----
T ss_pred ----C-CeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCHHHHHH----
Confidence 1 233333222111 1347999999999999999999999999999999988 5555544433332
Q ss_pred CChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC--CeEEec
Q 016069 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEVIFE 313 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~--~~v~~~ 313 (396)
+.+.+++.+|+++.+ +++++. +++.++
T Consensus 234 -------------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~ 264 (588)
T 3ics_A 234 -------------------------------------------------VHEHMKNHDVELVFEDGVDALEENGAVVRLK 264 (588)
T ss_dssp -------------------------------------------------HHHHHHHTTCEEECSCCEEEEEGGGTEEEET
T ss_pred -------------------------------------------------HHHHHHHcCCEEEECCeEEEEecCCCEEEEC
Confidence 235567789999887 888876 568999
Q ss_pred CCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------------ccCchH
Q 016069 314 NGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAA 380 (396)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~ 380 (396)
+|+++++|.||+|+|++|++. +++ ..+..++++|++.+| ..+.|+.|+|||+|||+.. ...|..
T Consensus 265 ~g~~i~~D~Vi~a~G~~p~~~-~l~-~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 341 (588)
T 3ics_A 265 SGSVIQTDMLILAIGVQPESS-LAK-GAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANR 341 (588)
T ss_dssp TSCEEECSEEEECSCEEECCH-HHH-HTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHH
T ss_pred CCCEEEcCEEEEccCCCCChH-HHH-hcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHH
Confidence 999999999999999999985 444 324456778998888 4566899999999999841 126889
Q ss_pred HHHHHHHHHhh
Q 016069 381 DAQNIADHINS 391 (396)
Q Consensus 381 ~a~~~a~~i~~ 391 (396)
||+.+|++|.+
T Consensus 342 ~g~~aa~~i~g 352 (588)
T 3ics_A 342 QGRMLADIIHG 352 (588)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999987
No 39
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.6e-33 Score=269.86 Aligned_cols=309 Identities=16% Similarity=0.138 Sum_probs=209.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCcccccC-CcCceeecccc----ccccCCCCCCCC-CCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPS-SYPMF 77 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~ 77 (396)
++||+|||||++|+++|..|++. |.+|+|||+.+ .||+|... +.+...+.... .+..+..+..+. .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999999 99999999988 88876422 12211000000 000011111110 00001
Q ss_pred CCHHHH-----------HHHHHHHHHhcCCcceeeeceEEEEEEEcC--CCCceEEEEeecCCCCceeeEEEEeCEEEEe
Q 016069 78 VSRAQF-----------IEYLDHYVSHFNIVPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGRVIEEYYSGRFLVVA 144 (396)
Q Consensus 78 ~~~~~~-----------~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~v~~~~~~~~g~~~~~~~~~d~vviA 144 (396)
.+...+ ..++...+++.+++. +.++ ++.++... +.+.+.|.+.++ +. ..+.||++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~~~~~~~~~~~~V~~~~g----~~--~~~~~d~lviA 151 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGR-GELIDSTPGLARHRIKATAADG----ST--SEHEADVVLVA 151 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEECCSSSCCSSEEEEEECTTS----CE--EEEEESEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEecCcccCCCCEEEEEeCCC----cE--EEEEeCEEEEc
Confidence 122332 233455566677764 6554 66665410 014455655443 11 37999999999
Q ss_pred ecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeee
Q 016069 145 SGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS 224 (396)
Q Consensus 145 tG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p 224 (396)
|| +.|..|+++|.+.. ..++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|
T Consensus 152 TG--s~p~~p~i~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 219 (499)
T 1xdi_A 152 TG--ASPRILPSAQPDGE--------RILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLP 219 (499)
T ss_dssp CC--EEECCCGGGCCCSS--------SEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSC
T ss_pred CC--CCCCCCCCCCCCcC--------cEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-cccc
Confidence 99 78888888876543 2455555444333 37899999999999999999999999999999998 5555
Q ss_pred hhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--c
Q 016069 225 REMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--I 302 (396)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v 302 (396)
..+.++... +.+.+++.+|+++.+ |
T Consensus 220 ~~d~~~~~~-----------------------------------------------------l~~~l~~~GV~i~~~~~V 246 (499)
T 1xdi_A 220 YEDADAALV-----------------------------------------------------LEESFAERGVRLFKNARA 246 (499)
T ss_dssp CSSHHHHHH-----------------------------------------------------HHHHHHHTTCEEETTCCE
T ss_pred ccCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEE
Confidence 544433332 235567789999887 8
Q ss_pred eeEECCe----EEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc-
Q 016069 303 ESIRGNE----VIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY- 376 (396)
Q Consensus 303 ~~~~~~~----v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~- 376 (396)
++++.++ +.+.+|+++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+.
T Consensus 247 ~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~-~~gl~~~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~l 324 (499)
T 1xdi_A 247 ASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLE-RVGIQLGRGNYLTVDR-VSRTLATGIYAAGDCTGLLPL 324 (499)
T ss_dssp EEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTT-TTTCCCBTTTBCCCCS-SSBCSSTTEEECSGGGTSCSC
T ss_pred EEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCch-hcCceECCCCCEEECC-CcccCCCCEEEEeccCCCccc
Confidence 8886542 455688899999999999999999553 34 3234466779888884 46689999999999987643
Q ss_pred --CchHHHHHHHHHHhhh
Q 016069 377 --GAAADAQNIADHINSI 392 (396)
Q Consensus 377 --~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|++|.+.
T Consensus 325 ~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 325 ASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 7899999999999864
No 40
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=5.6e-33 Score=265.69 Aligned_cols=297 Identities=18% Similarity=0.199 Sum_probs=198.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccccc----cc-cCCCCCCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQ----FC-QLPHLPFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|.+|+|||+. ..||+|.. .+.|...+..... +. ....+.+... ....+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 589999999999999999999999999999997 67887642 1111110000000 00 0000000000 001122
Q ss_pred HHHHHH-----------HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 81 AQFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 81 ~~~~~~-----------l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
..+.++ +.....+.+++. +.+ .++.++. . .|.+ ++ ..++||+||+||| +
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~~----~--~v~~-~g--------~~~~~d~lviAtG--s 141 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDV--IKG-FARFVDA----K--TLEV-NG--------ETITADHILIATG--G 141 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CCEEEET----T--EEEE-TT--------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEecC----C--EEEE-CC--------EEEEeCEEEECCC--C
Confidence 222222 223334556554 444 3344431 2 3555 33 6799999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhH
Q 016069 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (396)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (396)
.|..|+++|.+.. ++..++..... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .+++..+.+
T Consensus 142 ~p~~p~i~g~~~~----------~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 209 (450)
T 1ges_A 142 RPSHPDIPGVEYG----------IDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDPM 209 (450)
T ss_dssp EECCCCSTTGGGS----------BCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCccce----------ecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhHH
Confidence 8888888887432 22222222222 37899999999999999999999999999999987 444444333
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~ 307 (396)
+... +.+.+++.+|+++.+ +.+++.
T Consensus 210 ~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~ 236 (450)
T 1ges_A 210 ISET-----------------------------------------------------LVEVMNAEGPQLHTNAIPKAVVK 236 (450)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHHSCEEECSCCEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEE
Confidence 2222 234566678888887 788764
Q ss_pred C-----eEEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---Cc
Q 016069 308 N-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GA 378 (396)
Q Consensus 308 ~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 378 (396)
+ .+.+++|+++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+. .|
T Consensus 237 ~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~-~~gl~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A 314 (450)
T 1ges_A 237 NTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLE-AAGVKTNEKGYIVVDK-YQNTNIEGIYAVGDNTGAVELTPVA 314 (450)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHH-HHTCCBCTTSCBCCCT-TSBCSSTTEEECSGGGTSCCCHHHH
T ss_pred eCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCch-hcCceECCCCCEeECC-CCccCCCCEEEEeccCCCCccHHHH
Confidence 3 4677899999999999999999999644 34 3234467789898884 45689999999999986533 78
Q ss_pred hHHHHHHHHHHhhh
Q 016069 379 AADAQNIADHINSI 392 (396)
Q Consensus 379 ~~~a~~~a~~i~~~ 392 (396)
..||+.+|.+|.+.
T Consensus 315 ~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 315 VAAGRRLSERLFNN 328 (450)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999863
No 41
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-32 Score=264.69 Aligned_cols=306 Identities=14% Similarity=0.149 Sum_probs=204.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeeccccc----ccc-CCCCCCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQ-LPHLPFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|... +.+...+..... +.. +..+..+.......+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4899999999999999999999999999999998899877521 111110000000 000 0000000000000112
Q ss_pred HHH-----------HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 81 AQF-----------IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 81 ~~~-----------~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
..+ ...+...+++.+++. +.++.+ .++ . ..+.|.+.++.. .+++||+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i~--~--~~~~v~~~~G~~------~~~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FET--A--HSIRVNGLDGKQ------EMLETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EEE--T--TEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Eee--C--CEEEEEecCCce------EEEEcCEEEECCC--C
Confidence 222 222344555667665 665543 343 2 556676654321 5789999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhH
Q 016069 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (396)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (396)
.|..|+++|.+.. ..++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .++|..+.+
T Consensus 147 ~p~~p~~~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~ 216 (468)
T 2qae_A 147 EPTELPFLPFDEK--------VVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDED 216 (468)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CcCCCCCCCCCcC--------ceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCHH
Confidence 8888887776532 2444444433333 37999999999999999999999999999999998 555554443
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhh-cCCCeEEccC--ceeEE
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIR 306 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~~~--v~~~~ 306 (396)
+... +.+.+ ++.+|+++.+ +.+++
T Consensus 217 ~~~~-----------------------------------------------------l~~~l~~~~gv~i~~~~~v~~i~ 243 (468)
T 2qae_A 217 VTNA-----------------------------------------------------LVGALAKNEKMKFMTSTKVVGGT 243 (468)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHHTCCEEECSCEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHhhcCCcEEEeCCEEEEEE
Confidence 3332 23556 7789999887 88886
Q ss_pred CCe----EEec--CC--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc-ccc
Q 016069 307 GNE----VIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-GLY 376 (396)
Q Consensus 307 ~~~----v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-~~~ 376 (396)
.++ +.++ +| +++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+. .+.
T Consensus 244 ~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~-~~gl~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~ 321 (468)
T 2qae_A 244 NNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLD-KINVAKNERGFVKIGD-HFETSIPDVYAIGDVVDKGPM 321 (468)
T ss_dssp ECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHH-HHTCCBCTTSCBCCCT-TSBCSSTTEEECGGGBSSSCS
T ss_pred EcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCch-hcCCccCCCCCEeECC-CcccCCCCEEEeeccCCCCCc
Confidence 542 4554 67 678999999999999999543 33 2233456789888884 46689999999999988 533
Q ss_pred ---CchHHHHHHHHHHhhh
Q 016069 377 ---GAAADAQNIADHINSI 392 (396)
Q Consensus 377 ---~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|.+|.+.
T Consensus 322 ~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 322 LAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp CHHHHHHHHHHHHHHHTTC
T ss_pred cHhHHHHHHHHHHHHHcCC
Confidence 7899999999999864
No 42
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.5e-33 Score=268.12 Aligned_cols=299 Identities=18% Similarity=0.179 Sum_probs=201.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccc----cccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.. .+.+...+... ..+.....+.++.. ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 489999999999999999999999999999976 67776542 22221111000 00001111111111 1123333
Q ss_pred HHHHHH-----------HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 82 QFIEYL-----------DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 82 ~~~~~l-----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
.+.++. ....+..+++. ..+ .+..++. ..+.+.. ++ .+++||+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~~~~----~~~~v~~-~g--------~~~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRG-HAAFTSD----PKPTIEV-SG--------KKYTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEECSC----SSCEEEE-TT--------EEEECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEe-EEEEeeC----CeEEEEE-CC--------EEEEeeEEEEccC--CC
Confidence 333333 23334445543 333 3333322 3355663 22 6799999999999 78
Q ss_pred CCCC---CCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhh
Q 016069 151 PFTP---DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREM 227 (396)
Q Consensus 151 p~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~ 227 (396)
|..| +++|.+.. .++..+...... +++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+
T Consensus 160 p~~p~~~~i~G~~~~----------~~~~~~~~~~~~-~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d 227 (478)
T 3dk9_A 160 PSTPHESQIPGASLG----------ITSDGFFQLEEL-PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFD 227 (478)
T ss_dssp ECCCCTTTSTTGGGS----------BCHHHHTTCCSC-CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSC
T ss_pred CCCCCcCCCCCCcee----------EchHHhhchhhc-CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccC
Confidence 8888 78876532 333333333333 7999999999999999999999999999999988 4556555
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeE
Q 016069 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~ 305 (396)
.++...+ .+.+++.+|+++.+ ++++
T Consensus 228 ~~~~~~~-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i 254 (478)
T 3dk9_A 228 SMISTNC-----------------------------------------------------TEELENAGVEVLKFSQVKEV 254 (478)
T ss_dssp HHHHHHH-----------------------------------------------------HHHHHHTTCEEETTEEEEEE
T ss_pred HHHHHHH-----------------------------------------------------HHHHHHCCCEEEeCCEEEEE
Confidence 4443332 35567789999987 7777
Q ss_pred ECC--e----EEecC---C----cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEecc
Q 016069 306 RGN--E----VIFEN---G----HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLS 371 (396)
Q Consensus 306 ~~~--~----v~~~~---g----~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~ 371 (396)
+.+ + +.+.+ | +++++|.||+|+|++|++..+ ++ ..+..++++|++.+| ..+.|+.|+|||+|||
T Consensus 255 ~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~ 332 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLN-KLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDV 332 (478)
T ss_dssp EECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGG-GGTCCBCTTCCBCCC-TTCBCSSTTEEECGGG
T ss_pred EEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCch-hcCCeeCCCCCEeeC-CCcccCCCCEEEEEec
Confidence 643 3 45554 2 578999999999999999655 44 334456788999888 4557899999999999
Q ss_pred ccccc---CchHHHHHHHHHHhhh
Q 016069 372 RKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 372 ~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
+..+. .|..||+.+|++|.+.
T Consensus 333 ~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 333 CGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp GCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCccHhHHHHHHHHHHHHHcCC
Confidence 86533 7899999999999875
No 43
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.3e-34 Score=265.95 Aligned_cols=275 Identities=17% Similarity=0.236 Sum_probs=193.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (396)
.|++|||||+||+++|..|++.| +|+|||+.+..+ |.... + +..+ .. ....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~---l----~~~~---~g---------~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPM---L----SHYI---AG---------FIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTT---H----HHHH---TT---------SSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccch---h----HHHH---hC---------CCCHHHhccCC
Confidence 59999999999999999999999 999999987432 11000 0 0000 00 01111111112
Q ss_pred HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCC
Q 016069 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSAT 167 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~~ 167 (396)
.+.+++.+++. +.+++|+.++... +.|. .++ .++.||+||+||| ++|+.|+++|.+.
T Consensus 67 ~~~~~~~~v~~--~~g~~v~~id~~~----~~V~-~~g--------~~~~~d~lViATG--s~p~~p~i~G~~~------ 123 (367)
T 1xhc_A 67 LDWYRKRGIEI--RLAEEAKLIDRGR----KVVI-TEK--------GEVPYDTLVLATG--ARAREPQIKGKEY------ 123 (367)
T ss_dssp HHHHHHHTEEE--ECSCCEEEEETTT----TEEE-ESS--------CEEECSEEEECCC--EEECCCCSBTGGG------
T ss_pred HHHHHhCCcEE--EECCEEEEEECCC----CEEE-ECC--------cEEECCEEEECCC--CCCCCCCCCCcCC------
Confidence 23344567655 8888899988642 4466 443 5799999999999 7898888887322
Q ss_pred CCcceeeccCCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhh
Q 016069 168 GTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGG 242 (396)
Q Consensus 168 ~~~~~~~~~~~~~~~~~-----~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 242 (396)
.++.....+...+ .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++| .+.++...
T Consensus 124 ----v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~~~~~~--------- 188 (367)
T 1xhc_A 124 ----LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDEELSNM--------- 188 (367)
T ss_dssp ----EECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCHHHHHH---------
T ss_pred ----EEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCHHHHHH---------
Confidence 2333222111111 25899999999999999999999999999999988 4544 32222221
Q ss_pred HHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCeEEecCCcEEeC
Q 016069 243 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHF 320 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~v~~~~g~~~~~ 320 (396)
+.+.+++.+|+++.+ +++++.+++.+++|+ +++
T Consensus 189 --------------------------------------------l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~ 223 (367)
T 1xhc_A 189 --------------------------------------------IKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEG 223 (367)
T ss_dssp --------------------------------------------HHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EEC
T ss_pred --------------------------------------------HHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEc
Confidence 245667789999988 888887789999988 999
Q ss_pred cEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------ccCchHHHHHHHHHHhhh
Q 016069 321 DSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINSI 392 (396)
Q Consensus 321 D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------~~~a~~~a~~~a~~i~~~ 392 (396)
|.||+|+|++|++. +++ . .++..++| +.+| ..+.|+.|+|||+|||+.. ...|..||+.+|++|.+.
T Consensus 224 D~vi~a~G~~p~~~-ll~-~-~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 224 KVKICAIGIVPNVD-LAR-R-SGIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp SCEEEECCEEECCH-HHH-H-TTCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CEEEECcCCCcCHH-HHH-h-CCCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 99999999999986 444 3 22322355 6666 4566889999999999642 237899999999999864
No 44
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.5e-34 Score=276.83 Aligned_cols=302 Identities=16% Similarity=0.174 Sum_probs=198.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc-cCCcCceeeccccc----cccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK-KYSYDRLRLHLAKQ----FCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+.. +||+|. ..+.|...+..... ...+..+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999975 777653 22222211100000 000011100000 0113445
Q ss_pred HHHHHHHHHHHhcCCc----------ceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016069 82 QFIEYLDHYVSHFNIV----------PSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (396)
Q Consensus 82 ~~~~~l~~~~~~~~~~----------~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p 151 (396)
++.+++.....++... .. .+.....-. +.++|.+.++ ..+.||+||+||| ++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~g~a~~~------~~~~v~~~~~--------~~~~~d~lViATG--s~p 148 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQD-KIRGFAKFL------DEHTLQVDDH--------SQVIAKRIVIATG--SRP 148 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGG-EEESCEEEE------ETTEEEETTT--------EEEEEEEEEECCC--EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCee-EEEEEEEEe------cCCEEEEcCC--------cEEEeCEEEEccC--CCC
Confidence 5555554433322110 00 111111111 2234666543 7899999999999 788
Q ss_pred CCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHH
Q 016069 152 FTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLG 231 (396)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~ 231 (396)
..|++++... ...++......... .+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ .++|..+.++.
T Consensus 149 ~~p~~~~~~~--------~~v~t~~~~~~~~~-~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~ 218 (492)
T 3ic9_A 149 NYPEFLAAAG--------SRLLTNDNLFELND-LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDEEMK 218 (492)
T ss_dssp CCCHHHHTTG--------GGEECHHHHTTCSS-CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCHHHH
T ss_pred cCCCCCCccC--------CcEEcHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCHHHH
Confidence 8877544322 13444444444333 38999999999999999999999999999999998 45555444433
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-
Q 016069 232 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN- 308 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~- 308 (396)
..+ .+.+++. |+++.+ +++++.+
T Consensus 219 ~~l-----------------------------------------------------~~~l~~~-V~i~~~~~v~~i~~~~ 244 (492)
T 3ic9_A 219 RYA-----------------------------------------------------EKTFNEE-FYFDAKARVISTIEKE 244 (492)
T ss_dssp HHH-----------------------------------------------------HHHHHTT-SEEETTCEEEEEEECS
T ss_pred HHH-----------------------------------------------------HHHHhhC-cEEEECCEEEEEEEcC
Confidence 332 3445556 888877 7777643
Q ss_pred -e--EEec--CC--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---C
Q 016069 309 -E--VIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---G 377 (396)
Q Consensus 309 -~--v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 377 (396)
+ +.+. +| +++++|.||+|+|++|++..+ ++ ..+..++++|++.+|...+.|+.|+|||+|||+..+. .
T Consensus 245 ~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~-~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~ 323 (492)
T 3ic9_A 245 DAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLE-NTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHE 323 (492)
T ss_dssp SSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGG-GSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHH
T ss_pred CEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChh-hcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHH
Confidence 2 4444 67 678999999999999999654 34 3344578889998874566789999999999987643 7
Q ss_pred chHHHHHHHHHHhhh
Q 016069 378 AAADAQNIADHINSI 392 (396)
Q Consensus 378 a~~~a~~~a~~i~~~ 392 (396)
|..||+.+|.+|...
T Consensus 324 A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 324 AADDGKVAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999873
No 45
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=6.5e-32 Score=260.68 Aligned_cols=304 Identities=13% Similarity=0.132 Sum_probs=204.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccc----ccc--ccCCCCCCCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQF--CQLPHLPFPSSYPMFVS 79 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~ 79 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. .+.+...+... ..+ ......+.. .....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~---~~~~~ 82 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP---EPELD 82 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC---CCccC
Confidence 589999999999999999999999999999998888886642 11111000000 000 000011110 00122
Q ss_pred HHHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecC-------CCCceeeEEEEeCEE
Q 016069 80 RAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLL-------SPGRVIEEYYSGRFL 141 (396)
Q Consensus 80 ~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~-------~~g~~~~~~~~~d~v 141 (396)
...+.. .+...+++.++++ +.++.+. + ++ +.+.+.+.++. + |+. .+++||+|
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~v~v~~~~g~~~~~~~~~-g~~--~~i~ad~l 152 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF-L--DP--HHLEVSLTAGDAYEQAAPT-GEK--KIVAFKNC 152 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE-E--ET--TEEEEEEEEEEETTEEEEE-EEE--EEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE-c--cC--CEEEEEecCCccccccccc-Ccc--eEEEcCEE
Confidence 222222 2334455667665 6666543 2 22 55666544320 0 111 46899999
Q ss_pred EEeecCCCCCCCCC-CCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 142 VVASGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 142 viAtG~~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
|+||| +.|..|+ ++ .+. ..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+
T Consensus 153 ViAtG--s~p~~~~~i~-~~~---------~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~- 218 (482)
T 1ojt_A 153 IIAAG--SRVTKLPFIP-EDP---------RIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD- 218 (482)
T ss_dssp EECCC--EEECCCSSCC-CCT---------TEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-
T ss_pred EECCC--CCCCCCCCCC-ccC---------cEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-
Confidence 99999 6677665 44 221 2344444433333 38999999999999999999999999999999998
Q ss_pred eeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEcc
Q 016069 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (396)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ 300 (396)
.++|..+.++...+ .+.+++.+|+++.
T Consensus 219 ~~l~~~~~~~~~~l-----------------------------------------------------~~~l~~~gV~i~~ 245 (482)
T 1ojt_A 219 GLMQGADRDLVKVW-----------------------------------------------------QKQNEYRFDNIMV 245 (482)
T ss_dssp SSSTTSCHHHHHHH-----------------------------------------------------HHHHGGGEEEEEC
T ss_pred ccccccCHHHHHHH-----------------------------------------------------HHHHHhcCCEEEE
Confidence 56565444333322 3556778999998
Q ss_pred C--ceeEECC----eEEecC----CcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEe
Q 016069 301 G--IESIRGN----EVIFEN----GHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVG 369 (396)
Q Consensus 301 ~--v~~~~~~----~v~~~~----g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~G 369 (396)
+ +.+++.+ .+.+++ |+++++|.||+|+|++||+..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|
T Consensus 246 ~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~-~~gl~~~~~G~i~vd~-~~~t~~~~IyA~G 323 (482)
T 1ojt_A 246 NTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAE-KAGVAVTDRGFIEVDK-QMRTNVPHIYAIG 323 (482)
T ss_dssp SCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGG-GTTCCCCTTSCCCCCT-TSBCSSTTEEECG
T ss_pred CCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChh-hcCceeCCCCCEeeCC-CcccCCCCEEEEE
Confidence 8 8888643 366677 7789999999999999999654 44 3244466779888884 5678999999999
Q ss_pred ccccccc---CchHHHHHHHHHHhhh
Q 016069 370 LSRKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 370 d~~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
||+..+. .|..||+.+|.+|.+.
T Consensus 324 D~~~~~~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 324 DIVGQPMLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp GGTCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCccHHHHHHHHHHHHHHHcCC
Confidence 9987533 7899999999999863
No 46
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-32 Score=267.04 Aligned_cols=298 Identities=18% Similarity=0.244 Sum_probs=193.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecc----ccccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+. ..||+|.. .+.|...+.. ...+.....+.+... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 489999999999999999999999999999998 47887753 2222110000 000000000010000 011222
Q ss_pred HHH-----------HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe---------ecCCCCceeeEEEEeCEE
Q 016069 82 QFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---------NLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 82 ~~~-----------~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~---------~~~~~g~~~~~~~~~d~v 141 (396)
.+. ..+...+++.++++ +.++ +..++. ..+.+... ++.+ .++.||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~id~----~~v~v~~~~~~~~~~~~~~~~------~~~~~d~l 145 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGT-ASFLSE----NRILIKGTKDNNNKDNGPLNE------EILEGRNI 145 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CCCC------------------------------------CBSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEeeC----CEEEEEeccccccccccCCCc------eEEEeCEE
Confidence 222 22334445556654 5443 222321 23333220 0111 56899999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCce
Q 016069 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVH 221 (396)
Q Consensus 142 viAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~ 221 (396)
|+||| +.|..|+++|.+. .++..++..... +++++|||+|.+|+|+|..|.+.|.+|+++++.+ .
T Consensus 146 ViAtG--s~p~~p~i~G~~~----------~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ 210 (500)
T 1onf_A 146 LIAVG--NKPVFPPVKGIEN----------TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-R 210 (500)
T ss_dssp EECCC--CCBCCCSCTTGGG----------CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-S
T ss_pred EECCC--CCCCCCCCCCCCc----------ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-c
Confidence 99999 7888888888743 244444444333 7899999999999999999999999999999988 5
Q ss_pred eeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC
Q 016069 222 VLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (396)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~ 301 (396)
++|..+.++...+ .+.+++.+|+++.+
T Consensus 211 ~l~~~d~~~~~~l-----------------------------------------------------~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 211 ILRKFDESVINVL-----------------------------------------------------ENDMKKNNINIVTF 237 (500)
T ss_dssp SCTTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEEECS
T ss_pred cCcccchhhHHHH-----------------------------------------------------HHHHHhCCCEEEEC
Confidence 5565544433332 35567789999887
Q ss_pred --ceeEECC-----eEEecCCcE-EeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccc
Q 016069 302 --IESIRGN-----EVIFENGHS-HHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSR 372 (396)
Q Consensus 302 --v~~~~~~-----~v~~~~g~~-~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~ 372 (396)
+++++.+ .+.+++|++ +++|.||+|+|++|++..+ ++ ..+... ++|++.+|.. +.|+.|+|||+|||+
T Consensus 238 ~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~-~~g~~~-~~G~i~vd~~-~~t~~~~iya~GD~~ 314 (500)
T 1onf_A 238 ADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLE-KLNVET-NNNYIVVDEN-QRTSVNNIYAVGDCC 314 (500)
T ss_dssp CCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCT-TTTCCB-SSSCEEECTT-CBCSSSSEEECSTTE
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCch-hcCccc-cCCEEEECCC-cccCCCCEEEEeccc
Confidence 8888643 367788988 9999999999999999644 44 323334 6888888844 568999999999998
Q ss_pred ----------------------------------cc---ccCchHHHHHHHHHHhh
Q 016069 373 ----------------------------------KG---LYGAAADAQNIADHINS 391 (396)
Q Consensus 373 ----------------------------------~~---~~~a~~~a~~~a~~i~~ 391 (396)
.. ...|.+||+.+|++|.+
T Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 315 MVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp EEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 22 22689999999999986
No 47
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.9e-32 Score=262.05 Aligned_cols=301 Identities=18% Similarity=0.191 Sum_probs=203.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccc----cccc-cCCCCCCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|.+|+|+|+. ..||.|.. .+.|...+... ..+. ....+..+. ......
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~--~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISG--EVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEE--CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCC--CCccCH
Confidence 479999999999999999999999999999998 67776642 11111100000 0000 000000000 000111
Q ss_pred H-----------HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 81 A-----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 81 ~-----------~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
. .+...+...+++.++++ +.++.+. + + .+.+.+.+.++.. .+++||+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~-i--d--~~~v~V~~~~G~~------~~~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF-A--D--ANTLLVDLNDGGT------ESVTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE-S--S--SSEEEEEETTSCC------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--c--CCeEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 1 22233445556667665 6666543 2 2 2566677655421 5799999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhH
Q 016069 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (396)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (396)
.|..|+++|.+. ..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+.+
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 213 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDAD 213 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCc---------eEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHH
Confidence 788787777543 1344444333332 37999999999999999999999999999999998 566654443
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~ 307 (396)
+...+ .+.+++.+|+++.+ +++++.
T Consensus 214 ~~~~l-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 214 VSKEI-----------------------------------------------------EKQFKKLGVTILTATKVESIAD 240 (464)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHTCEEECSCEEEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHcCCEEEeCcEEEEEEE
Confidence 33322 34566678999887 888865
Q ss_pred Ce----EEec-CC--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---
Q 016069 308 NE----VIFE-NG--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY--- 376 (396)
Q Consensus 308 ~~----v~~~-~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~--- 376 (396)
++ +.++ +| +++++|.||+|+|++||+..+ ++ ..+..++++|++.+|.. +.|+.|+|||+|||+..+.
T Consensus 241 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~-~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~ 318 (464)
T 2a8x_A 241 GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLD-KAGVALTDRKAIGVDDY-MRTNVGHIYAIGDVNGLLQLAH 318 (464)
T ss_dssp CSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHH-HHTCCBCTTSSBCCCTT-SBCSSTTEEECGGGGCSSCSHH
T ss_pred cCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCch-hcCCccCCCCCEeECcC-CccCCCCEEEeECcCCCccCHH
Confidence 42 4444 66 678999999999999999653 33 22334567898888844 5689999999999987633
Q ss_pred CchHHHHHHHHHHhh
Q 016069 377 GAAADAQNIADHINS 391 (396)
Q Consensus 377 ~a~~~a~~~a~~i~~ 391 (396)
.|..||+.+|++|.+
T Consensus 319 ~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 319 VAEAQGVVAAETIAG 333 (464)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcC
Confidence 789999999999986
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=7.7e-33 Score=267.58 Aligned_cols=305 Identities=17% Similarity=0.204 Sum_probs=201.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEec--------CCCCCccccc-CCcCceeecccccc----ccCCCCCCCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILER--------ENCYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~--------~~~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (396)
.++||+|||||++|+++|..|++.|.+|+|||+ ...+||+|.. .+.|...+...... .....+....
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 368999999999999999999999999999997 4568887752 22222111100000 0000111111
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEE
Q 016069 73 SYPMFVSRAQFIEYLDH-----------YVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~v 141 (396)
..........+..+... .....+++ .+...+..++ ...+.+.+.++ +. .+++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g----~~--~~~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGG----KA--TLLSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTS----CE--EEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCC----ce--EEEECCEE
Confidence 11112344444444332 22334544 3344444332 24455555443 21 67999999
Q ss_pred EEeecCCCCCCCCC-CCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 142 VVASGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 142 viAtG~~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
|+||| +.|..|+ ++|.+.. .++..++..... .+++++|||+|.+|+|+|..|.+.|.+|+++.+.+
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~- 218 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFWLKE-SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI- 218 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-
Confidence 99999 7899998 8887543 233333333333 37889999999999999999999999999999864
Q ss_pred eeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEcc
Q 016069 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (396)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ 300 (396)
.++..+.++... +.+.+++.+|+++.
T Consensus 219 -~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~gv~~~~ 244 (488)
T 3dgz_A 219 -PLRGFDQQMSSL-----------------------------------------------------VTEHMESHGTQFLK 244 (488)
T ss_dssp -SSTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEEE
T ss_pred -ccccCCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEe
Confidence 444444433332 23556778899988
Q ss_pred C--ceeEEC--C---eEEecC---Cc--EEeCcEEEECCCCCCCcccc-cccCCCCCCC-CCCCcCCCCCCCccCCCceE
Q 016069 301 G--IESIRG--N---EVIFEN---GH--SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLN-DDGIPKQSYPNHWKGKNGLY 366 (396)
Q Consensus 301 ~--v~~~~~--~---~v~~~~---g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vy 366 (396)
+ +.+++. + .+.+.+ |+ ++++|.||+|+|++|++..+ ++ ..+..++ ++|++.+| ..+.|+.|+||
T Consensus 245 ~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~-~~g~~~~~~~G~i~vd-~~~~t~~~~Iy 322 (488)
T 3dgz_A 245 GCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLE-KAGISTNPKNQKIIVD-AQEATSVPHIY 322 (488)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGG-GGTCCBCSSSCCBCCC-TTSBCSSTTEE
T ss_pred CCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCcc-ccCcEecCCCCeEeEC-CCCccCCCCEE
Confidence 7 777753 2 255544 54 47899999999999999654 34 3234456 78988888 45668999999
Q ss_pred EEeccccc----ccCchHHHHHHHHHHhhh
Q 016069 367 CVGLSRKG----LYGAAADAQNIADHINSI 392 (396)
Q Consensus 367 a~Gd~~~~----~~~a~~~a~~~a~~i~~~ 392 (396)
|+|||+.+ ...|..||+.+|.+|...
T Consensus 323 A~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 323 AIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp ECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred EeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 99999743 237889999999999864
No 49
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.1e-33 Score=276.84 Aligned_cols=290 Identities=17% Similarity=0.198 Sum_probs=204.7
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
++|+|||||++|+++|..|++. +.+|+|||+.+..+- . ... .+. ..... .......+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~--~-----~~~--l~~---~~~~~-------~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF--A-----NCG--LPY---HISGE-------IAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB--C-----GGG--HHH---HHTSS-------SCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc--c-----ccC--chH---HhcCC-------cCChHHhhcc
Confidence 5899999999999999999998 789999999886541 1 000 000 00000 0012222334
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
++..+.+++++++ +++++|++++... +.+.+..... |+. .++.||+||+||| +.|+.|+++|.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLD---GSE--YQESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCC---CCe--EEEECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 5555666678775 8999999998765 5554443211 121 5799999999999 78998999887643
Q ss_pred CCCCcceeeccCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcC
Q 016069 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYV 238 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~ 238 (396)
..++.....+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ ..+|..+..+...+
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l---- 198 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDREMAGFA---- 198 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCHHHHHHH----
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCHHHHHHH----
Confidence 22332221111 11247899999999999999999999999999999998 55565444333322
Q ss_pred ChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC---------
Q 016069 239 PCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--------- 307 (396)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~--------- 307 (396)
.+.+++.+|+++.+ +++++.
T Consensus 199 -------------------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~ 229 (565)
T 3ntd_A 199 -------------------------------------------------HQAIRDQGVDLRLGTALSEVSYQVQTHVASD 229 (565)
T ss_dssp -------------------------------------------------HHHHHHTTCEEEETCCEEEEEEECCCCCCCG
T ss_pred -------------------------------------------------HHHHHHCCCEEEeCCeEEEEecccccccccc
Confidence 34566678888776 777754
Q ss_pred -----------C---eEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc
Q 016069 308 -----------N---EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 373 (396)
Q Consensus 308 -----------~---~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 373 (396)
+ .+.+.+|+++++|.||+|+|++|++. ++. ..+..++++|.+.+| ..+.|+.|+|||+|||+.
T Consensus 230 ~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~-~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~ 306 (565)
T 3ntd_A 230 AAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ-LAR-DAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVE 306 (565)
T ss_dssp GGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCH-HHH-HHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBC
T ss_pred ccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchH-HHH-hCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEe
Confidence 2 36678899999999999999999985 444 324456788999888 456689999999999973
Q ss_pred c-------------ccCchHHHHHHHHHHhhh
Q 016069 374 G-------------LYGAAADAQNIADHINSI 392 (396)
Q Consensus 374 ~-------------~~~a~~~a~~~a~~i~~~ 392 (396)
. ...|..||+.+|++|.+.
T Consensus 307 ~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 307 EQDFVTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp EEBTTTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred eccccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 1 126889999999999864
No 50
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.8e-32 Score=266.45 Aligned_cols=304 Identities=15% Similarity=0.142 Sum_probs=198.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC--------CCCccccc-CCcCceeecccccc----ccCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN--------CYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPSS 73 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~--------~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~ 73 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|.. .+.|...+...... .....+.....
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5899999999999999999999999999999854 67887642 22222111100000 00000111111
Q ss_pred CCCCCCHHHHHHHHHH-----------HHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEE
Q 016069 74 YPMFVSRAQFIEYLDH-----------YVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (396)
Q Consensus 74 ~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vv 142 (396)
.....+...+.++.+. ..+..+++ .+...+..++. ..+.|.+.++.. .++.||+||
T Consensus 112 ~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~----~~v~v~~~~g~~------~~i~~d~lV 178 (519)
T 3qfa_A 112 ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGP----HRIKATNNKGKE------KIYSAERFL 178 (519)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTCCC------CEEEEEEEE
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeC----CEEEEEcCCCCE------EEEECCEEE
Confidence 1112344444444332 22334554 33444544442 444555544322 589999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCcee
Q 016069 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHV 222 (396)
Q Consensus 143 iAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~ 222 (396)
+||| ++|..|+++|...+ .++..++..... .+++++|||+|.+|+|+|..|.+.|.+|+++.|. ..
T Consensus 179 iATG--s~p~~p~i~G~~~~---------~~t~~~~~~l~~-~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~ 244 (519)
T 3qfa_A 179 IATG--ERPRYLGIPGDKEY---------CISSDDLFSLPY-CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--IL 244 (519)
T ss_dssp ECCC--EEECCCCCTTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CS
T ss_pred EECC--CCcCCCCCCCccCc---------eEcHHHHhhhhh-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cc
Confidence 9999 78999999886543 233333333333 3678999999999999999999999999999985 45
Q ss_pred eehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-
Q 016069 223 LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG- 301 (396)
Q Consensus 223 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~- 301 (396)
++..+.++...+ .+.+++.+|+++.+
T Consensus 245 l~~~d~~~~~~~-----------------------------------------------------~~~l~~~GV~v~~~~ 271 (519)
T 3qfa_A 245 LRGFDQDMANKI-----------------------------------------------------GEHMEEHGIKFIRQF 271 (519)
T ss_dssp STTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEEEESE
T ss_pred cccCCHHHHHHH-----------------------------------------------------HHHHHHCCCEEEeCC
Confidence 555544433332 35567788888877
Q ss_pred -ceeEEC------Ce--EE--ecCCc---EEeCcEEEECCCCCCCcccc-cccCCCCCCC-CCCCcCCCCCCCccCCCce
Q 016069 302 -IESIRG------NE--VI--FENGH---SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLN-DDGIPKQSYPNHWKGKNGL 365 (396)
Q Consensus 302 -v~~~~~------~~--v~--~~~g~---~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~~~~~~~v 365 (396)
+++++. +. +. ..+|. ++++|.||+|+|++|++..+ ++ ..+..++ ++|++.+|. .+.|+.|+|
T Consensus 272 ~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~-~~gl~~~~~~G~I~Vd~-~~~Ts~~~I 349 (519)
T 3qfa_A 272 VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLE-TVGVKINEKTGKIPVTD-EEQTNVPYI 349 (519)
T ss_dssp EEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCST-TTTCCCCTTTCCBCCCT-TSBCSSTTE
T ss_pred eEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChh-hcCcEEcCCCCeEeeCC-CCccCCCCE
Confidence 444432 22 22 23552 56899999999999999654 34 3233455 578888884 466899999
Q ss_pred EEEecccc-cc---cCchHHHHHHHHHHhhh
Q 016069 366 YCVGLSRK-GL---YGAAADAQNIADHINSI 392 (396)
Q Consensus 366 ya~Gd~~~-~~---~~a~~~a~~~a~~i~~~ 392 (396)
||+|||+. .+ ..|..||+.+|++|.+.
T Consensus 350 yA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 350 YAIGDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp EECGGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 99999983 32 37889999999999864
No 51
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3e-32 Score=261.50 Aligned_cols=297 Identities=17% Similarity=0.237 Sum_probs=198.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecccc----ccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|.. .+.|...+.... .+.....+.+... ....+..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCHH
Confidence 589999999999999999999999999999997 67887752 112111000000 0000000000000 0012233
Q ss_pred HHHHHH-----------HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 82 QFIEYL-----------DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 82 ~~~~~l-----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
.+.++. .....+.+++. +.+ .++.++ . . .|.+ ++ .+++||+||+||| +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~--~--~--~v~~-~g--------~~~~~d~lviAtG--s~ 141 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITR--VDG-HARFVD--A--H--TIEV-EG--------QRLSADHIVIATG--GR 141 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEE--T--T--EEEE-TT--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEe-EEEEcc--C--C--EEEE-CC--------EEEEcCEEEECCC--CC
Confidence 333222 23334556654 444 344443 1 2 3555 33 6799999999999 78
Q ss_pred CCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHH
Q 016069 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYL 230 (396)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~ 230 (396)
|..|+++|.+.. ++..++..... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .+++..+.++
T Consensus 142 p~~p~i~G~~~~----------~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~ 209 (463)
T 2r9z_A 142 PIVPRLPGAELG----------ITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDPLL 209 (463)
T ss_dssp ECCCSCTTGGGS----------BCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHH
T ss_pred CCCCCCCCccce----------ecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCHHH
Confidence 888888887432 22222222222 37899999999999999999999999999999987 4444433322
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC
Q 016069 231 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 308 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~ 308 (396)
... +.+.+++.+|+++.+ +++++.+
T Consensus 210 ~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 210 SAT-----------------------------------------------------LAENMHAQGIETHLEFAVAALERD 236 (463)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTTCEEESSCCEEEEEEE
T ss_pred HHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEe
Confidence 222 235566788999887 8888643
Q ss_pred ----eEEecCCc-EEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---Cch
Q 016069 309 ----EVIFENGH-SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAA 379 (396)
Q Consensus 309 ----~v~~~~g~-~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 379 (396)
.+.+++|+ ++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+. .|.
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~-~~g~~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~ 314 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLE-AAGIEVQSNGMVPTDA-YQNTNVPGVYALGDITGRDQLTPVAI 314 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHH-HHTCCCCTTSCCCCCT-TSBCSSTTEEECGGGGTSCCCHHHHH
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCch-hcCCccCCCCCEeECC-CCccCCCCEEEEeecCCCcccHHHHH
Confidence 47778998 89999999999999999644 33 2234467789888884 45689999999999986533 788
Q ss_pred HHHHHHHHHHhhh
Q 016069 380 ADAQNIADHINSI 392 (396)
Q Consensus 380 ~~a~~~a~~i~~~ 392 (396)
.||+.+|.+|...
T Consensus 315 ~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 315 AAGRRLAERLFDG 327 (463)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999863
No 52
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=7.6e-32 Score=260.11 Aligned_cols=306 Identities=15% Similarity=0.170 Sum_probs=201.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC------CCccccc-CCcCceeecc-cccccc----CCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC------YASIWKK-YSYDRLRLHL-AKQFCQ----LPHLPFPSSY 74 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~------~gg~~~~-~~~~~~~~~~-~~~~~~----~~~~~~~~~~ 74 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+. +||+|.. .+.|...+.. ...... +..+.....
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~- 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG- 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS-
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC-
Confidence 68999999999999999999999999999999863 5555432 1111110000 000000 000000000
Q ss_pred CCCCCHHHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEE
Q 016069 75 PMFVSRAQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (396)
Q Consensus 75 ~~~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vvi 143 (396)
........+.. .+....++.+++. ..+. +..+ + ...+.+.+.++. . ..+.||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~--~--~~~~~v~~~~g~----~--~~~~~d~lvl 148 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEGH-GKLL--A--GKKVEVTAADGS----S--QVLDTENVIL 148 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESE-EEEC--S--TTCEEEECTTSC----E--EEECCSCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEe--c--CCEEEEEcCCCc----e--EEEEcCEEEE
Confidence 00112222222 2223344556653 4443 3333 2 255666655432 1 5799999999
Q ss_pred eecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceee
Q 016069 144 ASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL 223 (396)
Q Consensus 144 AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (396)
||| +.|..|+.++.+.. ..+++.+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++
T Consensus 149 AtG--~~p~~~~~~~~~~~--------~v~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 216 (476)
T 3lad_A 149 ASG--SKPVEIPPAPVDQD--------VIVDSTGALDFQN-VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFL 216 (476)
T ss_dssp CCC--EEECCCTTSCCCSS--------SEEEHHHHTSCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSS
T ss_pred cCC--CCCCCCCCCCCCcc--------cEEechhhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcC
Confidence 999 67776654443321 3455544443333 48999999999999999999999999999999998 555
Q ss_pred ehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--
Q 016069 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (396)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-- 301 (396)
|..+.++... +.+.+++.+|+++.+
T Consensus 217 ~~~~~~~~~~-----------------------------------------------------l~~~l~~~Gv~v~~~~~ 243 (476)
T 3lad_A 217 PAVDEQVAKE-----------------------------------------------------AQKILTKQGLKILLGAR 243 (476)
T ss_dssp TTSCHHHHHH-----------------------------------------------------HHHHHHHTTEEEEETCE
T ss_pred cccCHHHHHH-----------------------------------------------------HHHHHHhCCCEEEECCE
Confidence 5544433332 245567789999887
Q ss_pred ceeEECC----eEEecCC---cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc
Q 016069 302 IESIRGN----EVIFENG---HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 373 (396)
Q Consensus 302 v~~~~~~----~v~~~~g---~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 373 (396)
+++++.+ .+.+.++ +++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+.
T Consensus 244 v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~-~~g~~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~ 321 (476)
T 3lad_A 244 VTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAA-DSGVTLDERGFIYVDD-YCATSVPGVYAIGDVVR 321 (476)
T ss_dssp EEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSS-CCSCCBCTTSCBCCCT-TSBCSSTTEEECGGGSS
T ss_pred EEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCcc-ccCccccCCCCEeeCC-CcccCCCCEEEEEccCC
Confidence 8888643 2666655 678999999999999999765 44 4344567889998884 46689999999999986
Q ss_pred ccc---CchHHHHHHHHHHhhhc
Q 016069 374 GLY---GAAADAQNIADHINSIL 393 (396)
Q Consensus 374 ~~~---~a~~~a~~~a~~i~~~l 393 (396)
.+. .|..||+.+|++|.+..
T Consensus 322 ~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 322 GAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCC
T ss_pred CcccHHHHHHHHHHHHHHhcCCC
Confidence 543 88999999999998643
No 53
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.4e-32 Score=263.26 Aligned_cols=284 Identities=17% Similarity=0.241 Sum_probs=195.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
++||+|||||++|+++|..|++. +.+|+|||+.+..+.... .++. .........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------~~p~-----~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------GIPY-----VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------CCcc-----ccCCCCCHHHhh
Confidence 47999999999999999999998 789999999885542110 0000 001111222233
Q ss_pred HHH-HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016069 85 EYL-DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (396)
Q Consensus 85 ~~l-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~ 163 (396)
.+. +.+.++.++++ +.+++|++++. ..+.+.+.++ . ..+.||+||+||| +.|+.|+++|.+..
T Consensus 62 ~~~~~~~~~~~gi~v--~~~~~v~~i~~----~~~~v~~~~g----~---~~~~~d~lviAtG--~~p~~p~i~G~~~~- 125 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDL--HLNAEVIEVDT----GYVRVRENGG----E---KSYEWDYLVFANG--ASPQVPAIEGVNLK- 125 (449)
T ss_dssp ----CTHHHHTTCEE--ETTCEEEEECS----SEEEEECSSS----E---EEEECSEEEECCC--EEECCCSCBTTTST-
T ss_pred hcCHHHHHHhcCcEE--EecCEEEEEec----CCCEEEECCc----e---EEEEcCEEEECCC--CCCCCCCCCCCCCC-
Confidence 322 33345677766 88999999865 3355665442 1 4799999999999 78888888887542
Q ss_pred cCCCCCcceeeccCCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHh
Q 016069 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLL 235 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~ 235 (396)
..+......+ ...+.+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..++. .+.++...
T Consensus 126 -------~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~-- 195 (449)
T 3kd9_A 126 -------GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDKEVTDI-- 195 (449)
T ss_dssp -------TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHH--
T ss_pred -------CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHH--
Confidence 1222211110 112257899999999999999999999999999999998 44444 33332222
Q ss_pred hcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe---E
Q 016069 236 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE---V 310 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~---v 310 (396)
+.+.+++. |+++.+ +.+++.+. .
T Consensus 196 ---------------------------------------------------l~~~l~~~-v~i~~~~~v~~i~~~~~v~~ 223 (449)
T 3kd9_A 196 ---------------------------------------------------LEEKLKKH-VNLRLQEITMKIEGEERVEK 223 (449)
T ss_dssp ---------------------------------------------------HHHHHTTT-SEEEESCCEEEEECSSSCCE
T ss_pred ---------------------------------------------------HHHHHHhC-cEEEeCCeEEEEeccCcEEE
Confidence 23455666 888776 77777653 4
Q ss_pred EecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------------ccC
Q 016069 311 IFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYG 377 (396)
Q Consensus 311 ~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~ 377 (396)
++.+++++++|.||+|+|++|++. +++ ..+..++++|++.+| ..+.|+.|+|||+|||+.. ...
T Consensus 224 v~~~g~~i~~D~Vv~a~G~~p~~~-l~~-~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~ 300 (449)
T 3kd9_A 224 VVTDAGEYKAELVILATGIKPNIE-LAK-QLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPA 300 (449)
T ss_dssp EEETTEEEECSEEEECSCEEECCH-HHH-HTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHH
T ss_pred EEeCCCEEECCEEEEeeCCccCHH-HHH-hCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHH
Confidence 567888999999999999999985 444 324456788999888 4566899999999999741 237
Q ss_pred chHHHHHHHHHHhhh
Q 016069 378 AAADAQNIADHINSI 392 (396)
Q Consensus 378 a~~~a~~~a~~i~~~ 392 (396)
|..||+.+|++|.+.
T Consensus 301 A~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 301 GNKMGYVAGSNIAGK 315 (449)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999864
No 54
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-32 Score=264.27 Aligned_cols=297 Identities=16% Similarity=0.145 Sum_probs=201.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecc----ccccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|+++|.+|+|||+ ..+||+|.. .+.+...+.. ...+.....+.+..... ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 58999999999999999999999999999999 678886642 2111110000 00000000000000000 01222
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe-ecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.+..++.......+++. ..+ .+..++ ...+.+. ++ ..+.||++|+||| +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~------~~~v~~~~~~--------~~~~~d~lviAtG--~ 143 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELAG------PNTVKLLASG--------KTVTAERIVIAVG--G 143 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEESS------SSEEEETTTT--------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEee------CCEEEEecCC--------eEEEeCEEEEecC--C
Confidence 22233344455556653 333 444432 1235552 22 6799999999999 7
Q ss_pred CCC-CCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhh
Q 016069 150 NPF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV 228 (396)
Q Consensus 150 ~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~ 228 (396)
.|. .|.++|.+.. ++..++..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.
T Consensus 144 ~p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~ 211 (463)
T 4dna_A 144 HPSPHDALPGHELC----------ITSNEAFDLPA-LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ 211 (463)
T ss_dssp EECCCTTSTTGGGC----------BCHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHhhhhc-CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH
Confidence 888 8888887633 33333333332 38999999999999999999999999999999988 44454444
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE
Q 016069 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~ 306 (396)
.+... +.+.+++.+|+++.+ +++++
T Consensus 212 ~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~ 238 (463)
T 4dna_A 212 DMRRG-----------------------------------------------------LHAAMEEKGIRILCEDIIQSVS 238 (463)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHTTCEEECSCCEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHHCCCEEECCCEEEEEE
Confidence 33322 245667789999987 88886
Q ss_pred CC-----eEE-ecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---
Q 016069 307 GN-----EVI-FENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY--- 376 (396)
Q Consensus 307 ~~-----~v~-~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~--- 376 (396)
.+ .|. +++|+ +++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+.
T Consensus 239 ~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd~-~~~t~~~~iya~GD~~~~~~~~~ 315 (463)
T 4dna_A 239 ADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLE-AAGVRTNELGAIIVDA-FSRTSTPGIYALGDVTDRVQLTP 315 (463)
T ss_dssp ECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTG-GGTCCBCTTSCBCCCT-TCBCSSTTEEECSGGGSSCCCHH
T ss_pred EcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCcc-ccCceECCCCCEeECc-CCCCCCCCEEEEEecCCCCCChH
Confidence 54 366 77887 9999999999999999654 44 3344567889998884 45589999999999987643
Q ss_pred CchHHHHHHHHHHhhh
Q 016069 377 GAAADAQNIADHINSI 392 (396)
Q Consensus 377 ~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|++|.+.
T Consensus 316 ~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 316 VAIHEAMCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7899999999999864
No 55
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.6e-32 Score=259.34 Aligned_cols=285 Identities=19% Similarity=0.202 Sum_probs=194.4
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (396)
|+....++||+|||||++|+++|..|++.|. +|+|+|+.+..+ |.... .+..+..-.. ... .+
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--~~~~~~~~~~---~~~--~~- 65 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPP--LSKDFMAHGD---AEK--IR- 65 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGG--GGTHHHHHCC---GGG--SB-
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCC--CCHHHhCCCc---hhh--hh-
Confidence 6655557899999999999999999999988 599999987543 11000 0000000000 000 00
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCC-C
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-R 157 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~-~ 157 (396)
+. .+++.+++. +.+++|+.++... +.|.+.++ .++.||+||+||| +.|..|++ +
T Consensus 66 --------~~-~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~g--------~~~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 66 --------LD-CKRAPEVEW--LLGVTAQSFDPQA----HTVALSDG--------RTLPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp --------CC-CTTSCSCEE--EETCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCGGGT
T ss_pred --------HH-HHHHCCCEE--EcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCCCCccC
Confidence 00 123445554 8888899998642 45777654 5799999999999 78888887 8
Q ss_pred CccccccCCCCCcceeeccCCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHH
Q 016069 158 GLSSFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLG 231 (396)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~ 231 (396)
|.+ . ..++.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|+ .+..+.
T Consensus 121 G~~-~--------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~ 190 (408)
T 2gqw_A 121 GAT-M--------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAAPATLA 190 (408)
T ss_dssp TCS-S--------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHHH
T ss_pred CCC-C--------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccccccCHHHH
Confidence 765 2 1222211111 111237999999999999999999999999999999998 44443 222222
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe
Q 016069 232 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE 309 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~ 309 (396)
.. +.+.+++.+|+++.+ +++++.+.
T Consensus 191 ~~-----------------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~ 217 (408)
T 2gqw_A 191 DF-----------------------------------------------------VARYHAAQGVDLRFERSVTGSVDGV 217 (408)
T ss_dssp HH-----------------------------------------------------HHHHHHHTTCEEEESCCEEEEETTE
T ss_pred HH-----------------------------------------------------HHHHHHHcCcEEEeCCEEEEEECCE
Confidence 21 235567788999887 88887557
Q ss_pred EEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc-------------c
Q 016069 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------Y 376 (396)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~ 376 (396)
+.+++|+++++|.||+|+|++|++. +++ ..+...+ +| +.+| ..+.|+.|+|||+|||+... .
T Consensus 218 v~~~~g~~i~~D~vi~a~G~~p~~~-l~~-~~gl~~~-~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~ 292 (408)
T 2gqw_A 218 VLLDDGTRIAADMVVVGIGVLANDA-LAR-AAGLACD-DG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWS 292 (408)
T ss_dssp EEETTSCEEECSEEEECSCEEECCH-HHH-HHTCCBS-SS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHH
T ss_pred EEECCCCEEEcCEEEECcCCCccHH-HHH-hCCCCCC-CC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHH
Confidence 8889999999999999999999985 444 2122233 56 7676 45668899999999997642 2
Q ss_pred CchHHHHHHHHHHhhhc
Q 016069 377 GAAADAQNIADHINSIL 393 (396)
Q Consensus 377 ~a~~~a~~~a~~i~~~l 393 (396)
.|..||+.+|.+|.+..
T Consensus 293 ~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 293 NAQNQGIAVARHLVDPT 309 (408)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 68999999999998653
No 56
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=7.2e-32 Score=260.51 Aligned_cols=305 Identities=15% Similarity=0.171 Sum_probs=202.1
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEe--------cCCCCCccccc-CCcCceeecccccc----ccCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie--------~~~~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (396)
++||+|||||++|+++|..|++ .|.+|+||| ++..+||+|.. .++|...+.....+ .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999 999999999 35678887642 22222111000000 0000000000
Q ss_pred CCC-CCCCHHHHHHH-----------HHHHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEE---eecCCCCceeeEEE
Q 016069 73 SYP-MFVSRAQFIEY-----------LDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGRVIEEYY 136 (396)
Q Consensus 73 ~~~-~~~~~~~~~~~-----------l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~---~~~~~~g~~~~~~~ 136 (396)
... ...+...+.++ +....++. +++. +.+. ++.++. ..+.+.. .++. .. ..+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~~----~~v~v~~~~~~~g~---~~--~~~ 150 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTF--HQGF-GALQDN----HTVLVRESADPNSA---VL--ETL 150 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE--EESE-EEEEET----TEEEEESSSSTTSC---EE--EEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--EEeE-EEEeeC----CEEEEEeeccCCCC---ce--EEE
Confidence 000 00122333322 23333444 5553 5544 555542 3333322 1220 01 468
Q ss_pred EeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhh---cCceE
Q 016069 137 SGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTS 213 (396)
Q Consensus 137 ~~d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~---g~~v~ 213 (396)
.||+||+||| +.|..|+++|.+.. ++..++..... .+++++|||+|.+|+|+|..|.+. |.+|+
T Consensus 151 ~~d~lviAtG--s~p~~p~i~g~~~~----------~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vt 217 (490)
T 1fec_A 151 DTEYILLATG--SWPQHLGIEGDDLC----------ITSNEAFYLDE-APKRALCVGGGYISIEFAGIFNAYKARGGQVD 217 (490)
T ss_dssp EEEEEEECCC--EEECCCCSBTGGGC----------BCHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEE
T ss_pred EcCEEEEeCC--CCCCCCCCCCccce----------ecHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHhhccCcCeEE
Confidence 9999999999 78888888876432 23333333222 378999999999999999999999 99999
Q ss_pred EEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcC
Q 016069 214 LVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS 293 (396)
Q Consensus 214 ~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (396)
++++.+ .++|..+.++... +.+.+++
T Consensus 218 lv~~~~-~~l~~~d~~~~~~-----------------------------------------------------l~~~l~~ 243 (490)
T 1fec_A 218 LAYRGD-MILRGFDSELRKQ-----------------------------------------------------LTEQLRA 243 (490)
T ss_dssp EEESSS-SSSTTSCHHHHHH-----------------------------------------------------HHHHHHH
T ss_pred EEEcCC-CcccccCHHHHHH-----------------------------------------------------HHHHHHh
Confidence 999998 5555544433332 2355677
Q ss_pred CCeEEccC--ceeEECC-----eEEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCce
Q 016069 294 GQIQVLPG--IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGL 365 (396)
Q Consensus 294 ~~i~v~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~v 365 (396)
.+|+++.+ +++++.+ .+.+++|+++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|
T Consensus 244 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~-~~gl~~~~~G~I~Vd~-~~~t~~~~I 321 (490)
T 1fec_A 244 NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLE-KAGVEVAKNGAIKVDA-YSKTNVDNI 321 (490)
T ss_dssp TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGG-GGTCCBCTTSCBCCCT-TCBCSSTTE
T ss_pred CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCch-hcCccCCCCCCEEECC-CCccCCCCE
Confidence 89999887 8888643 3677889899999999999999999644 44 3244567789888884 466899999
Q ss_pred EEEeccccccc---CchHHHHHHHHHHhhh
Q 016069 366 YCVGLSRKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 366 ya~Gd~~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
||+|||+..+. .|..||+.+|.+|.+.
T Consensus 322 yA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 322 YAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp EECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 99999987533 7899999999999863
No 57
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.5e-32 Score=260.88 Aligned_cols=302 Identities=16% Similarity=0.193 Sum_probs=202.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeec-ccc---ccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLH-LAK---QFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+. ..||.|.. .+.+...+. ... .+..+..+....... ..+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV-TIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC-EECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-ccCHH
Confidence 479999999999999999999999999999998 77887642 111111000 000 000000000000000 01111
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
.+.+.+...+++.++++ +.++.+. ++ . +.+.+.+.++ . .+++||+||+||| +.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-id--~--~~v~V~~~~G----~---~~i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAYF-VD--A--NTVRVVNGDS----A---QTYTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEEE-EE--T--TEEEEEETTE----E---EEEECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEE-cc--C--CeEEEEeCCC----c---EEEEeCEEEEecC--CC
Confidence 13334455566667665 6666543 33 2 5566766543 1 4689999999999 78
Q ss_pred CCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHH
Q 016069 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYL 230 (396)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~ 230 (396)
|..|+++|.+. ..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+.++
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 213 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEKQM 213 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCHHH
T ss_pred CCCCCCCCccc---------eEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCHHH
Confidence 88887777542 1344443333332 37999999999999999999999999999999988 4555443332
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC
Q 016069 231 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 308 (396)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~ 308 (396)
... +.+.+++.+|+++.+ +.+++.+
T Consensus 214 ~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~ 240 (455)
T 1ebd_A 214 AAI-----------------------------------------------------IKKRLKKKGVEVVTNALAKGAEER 240 (455)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTTCEEEESEEEEEEEEE
T ss_pred HHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEe
Confidence 222 235566678999887 7787643
Q ss_pred --eE--Eec---CCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---C
Q 016069 309 --EV--IFE---NGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---G 377 (396)
Q Consensus 309 --~v--~~~---~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 377 (396)
++ .++ +++++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+. .
T Consensus 241 ~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~-~~g~~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~ 318 (455)
T 1ebd_A 241 EDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLE-QIGIKMTNRGLIEVDQ-QCRTSVPNIFAIGDIVPGPALAHK 318 (455)
T ss_dssp TTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTT-TTTCCBCTTSCBCCCT-TCBCSSTTEEECGGGSSSCCCHHH
T ss_pred CCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChh-hcCCccCCCCCEeeCC-CcccCCCCEEEEeccCCCcccHHH
Confidence 33 443 45789999999999999998553 34 3234457789888884 46689999999999987633 7
Q ss_pred chHHHHHHHHHHhhh
Q 016069 378 AAADAQNIADHINSI 392 (396)
Q Consensus 378 a~~~a~~~a~~i~~~ 392 (396)
|..||+.+|++|.+.
T Consensus 319 A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 319 ASYEGKVAAEAIAGH 333 (455)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999864
No 58
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=1.9e-32 Score=263.57 Aligned_cols=302 Identities=17% Similarity=0.151 Sum_probs=199.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeeccc-cccc---cCCCC-CCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA-KQFC---QLPHL-PFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~-~~~~---~~~~~-~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|... ++|...+... ...+ ..+.+ ..+.. ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 589999999999999999999999999999998 688877531 1111100000 0000 00111 00000 111122
Q ss_pred HHHHH-------HHH-----HHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016069 81 AQFIE-------YLD-----HYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (396)
Q Consensus 81 ~~~~~-------~l~-----~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~ 147 (396)
..+.. ++. ...++. ++++ +.+ .+..++. ..+.|.+.++. . ..++||+||+|||
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~~~~~~~----~~~~v~~~~g~----~--~~~~~d~lviAtG- 147 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITV--VHG-EARFKDD----QSLTVRLNEGG----E--RVVMFDRCLVATG- 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEE--EEE-EEEEEET----TEEEEEETTSS----E--EEEECSEEEECCC-
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEE--EEE-EEEEccC----CEEEEEeCCCc----e--EEEEeCEEEEeCC-
Confidence 33322 222 222233 4442 443 4555542 45667665532 1 5799999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhh
Q 016069 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREM 227 (396)
Q Consensus 148 ~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~ 227 (396)
++|..|+++|.+.. ..++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++++++ .++| .+
T Consensus 148 -s~p~~p~i~G~~~~--------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~ 215 (467)
T 1zk7_A 148 -ASPAVPPIPGLKES--------PYWTSTEALASDT-IPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-ED 215 (467)
T ss_dssp -EEECCCCCTTTTTS--------CCBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SC
T ss_pred -CCCCCCCCCCCCcC--------ceecHHHHhcccc-cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CC
Confidence 78999999887653 2233333322222 37999999999999999999999999999999988 4555 33
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeE
Q 016069 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~ 305 (396)
..+... +.+.+++.+|+++.+ ++++
T Consensus 216 ~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i 242 (467)
T 1zk7_A 216 PAIGEA-----------------------------------------------------VTAAFRAEGIEVLEHTQASQV 242 (467)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHHTTCEEETTCCEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHHhCCCEEEcCCEEEEE
Confidence 322222 235566778999887 7777
Q ss_pred ECC--e--EEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---C
Q 016069 306 RGN--E--VIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---G 377 (396)
Q Consensus 306 ~~~--~--v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 377 (396)
+.+ . +.+ ++.++++|.||+|+|+.|++..+ +. ..+...+++|++.+| ....|+.|+|||+|||+..+. .
T Consensus 243 ~~~~~~~~v~~-~~~~i~aD~Vv~a~G~~p~~~~l~l~-~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~ 319 (467)
T 1zk7_A 243 AHMDGEFVLTT-THGELRADKLLVATGRTPNTRSLALD-AAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYV 319 (467)
T ss_dssp EEETTEEEEEE-TTEEEEESEEEECSCEEESCTTSCGG-GGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHH
T ss_pred EEeCCEEEEEE-CCcEEEcCEEEECCCCCcCCCcCCch-hcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHH
Confidence 543 2 344 46689999999999999998643 33 323445778888887 446688999999999987643 7
Q ss_pred chHHHHHHHHHHhhh
Q 016069 378 AAADAQNIADHINSI 392 (396)
Q Consensus 378 a~~~a~~~a~~i~~~ 392 (396)
|..||+.+|.+|...
T Consensus 320 A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 320 AAAAGTRAAINMTGG 334 (467)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 889999999999763
No 59
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.1e-32 Score=261.55 Aligned_cols=297 Identities=16% Similarity=0.165 Sum_probs=198.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccccccc----cCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFC----QLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+.+ +||+|.. .+.|...+.....++ ....+..+. ....+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~--~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA--KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC--CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC--CCCcCHH
Confidence 5899999999999999999999999999999987 8887742 212211000000000 000000000 0011222
Q ss_pred HHH-------HH----HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 82 QFI-------EY----LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 82 ~~~-------~~----l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
.+. ++ +...+++.+++. +.++.+. ++ . .. +.+. + .+++||+||+||| ++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~~--~--~~--v~v~-g--------~~~~~d~lViATG--s~ 142 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFARL-VG--P--KE--VEVG-G--------ERYGAKSLILATG--SE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEEE-EE--T--TE--EEET-T--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEEE-cc--C--CE--EEEc-c--------EEEEeCEEEEcCC--CC
Confidence 222 22 233445567665 6655432 32 2 33 5554 3 6799999999999 67
Q ss_pred CCCCC-CCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhH
Q 016069 151 PFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (396)
Q Consensus 151 p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (396)
|..|+ +++.. ..+++.+........+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+.+
T Consensus 143 p~~p~gi~~~~----------~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 211 (464)
T 2eq6_A 143 PLELKGFPFGE----------DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDPE 211 (464)
T ss_dssp ECCBTTBCCSS----------SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCC----------cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHH
Confidence 87775 55411 2345444444333247999999999999999999999999999999988 555544433
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~ 307 (396)
+... +.+.+++.+|+++.+ +++++.
T Consensus 212 ~~~~-----------------------------------------------------l~~~l~~~gV~i~~~~~v~~i~~ 238 (464)
T 2eq6_A 212 TAAL-----------------------------------------------------LRRALEKEGIRVRTKTKAVGYEK 238 (464)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHhcCCEEEcCCEEEEEEE
Confidence 3322 235566778999888 777764
Q ss_pred C--e--EEec-C--Cc--EEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc-
Q 016069 308 N--E--VIFE-N--GH--SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY- 376 (396)
Q Consensus 308 ~--~--v~~~-~--g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~- 376 (396)
+ . +.++ + |+ ++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|||+..+.
T Consensus 239 ~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~l 316 (464)
T 2eq6_A 239 KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLE-KAGVKVDERGFIRVNA-RMETSVPGVYAIGDAARPPLL 316 (464)
T ss_dssp ETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHH-HHTCCBCTTSCBCCCT-TCBCSSTTEEECGGGTCSSCC
T ss_pred eCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChh-hcCceecCCCCEEECC-CcccCCCCEEEEeccCCCccc
Confidence 3 2 5555 6 77 89999999999999999654 33 2233456788888884 46689999999999987533
Q ss_pred --CchHHHHHHHHHHhhh
Q 016069 377 --GAAADAQNIADHINSI 392 (396)
Q Consensus 377 --~a~~~a~~~a~~i~~~ 392 (396)
.|..||+.+|.+|.+.
T Consensus 317 ~~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 317 AHKAMREGLIAAENAAGK 334 (464)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 7889999999999863
No 60
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.2e-32 Score=261.05 Aligned_cols=284 Identities=19% Similarity=0.207 Sum_probs=196.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCC--eEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
.++||+|||||++|+++|..|+++|.+ |+|+|+.+..+. ....+ ...+ + ........+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y-------~~~~l--~~~~--~---------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY-------ERPPL--SKEY--L---------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB-------CSGGG--GTTT--T---------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc-------CcccC--CHHH--H---------cCCCCHHHh
Confidence 357999999999999999999999986 999999875431 10000 0000 0 000011111
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~ 163 (396)
.........+.+++. +.+++|+.++... ..|.+.++ ..+.||+||+||| +.|+.|+++|.+..
T Consensus 68 ~~~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~- 130 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEM--KLGAEVVSLDPAA----HTVKLGDG--------SAIEYGKLIWATG--GDPRRLSCVGADLA- 130 (415)
T ss_dssp BSSCHHHHHHTTEEE--EETCCEEEEETTT----TEEEETTS--------CEEEEEEEEECCC--EECCCCBTTSSCCB-
T ss_pred ccCCHHHHHHCCcEE--EeCCEEEEEECCC----CEEEECCC--------CEEEeeEEEEccC--CccCCCCCCCcccc-
Confidence 112223344566665 8888999998643 34777665 6799999999999 78888888886532
Q ss_pred cCCCCCcceeeccCCCCC-----CCCC-CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh-hhHHHHHHhh
Q 016069 164 SSATGTGEVIHSTQYKNG-----KPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLR 236 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-----~~~~-~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~ 236 (396)
..++.....+. .... +++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++++. +..+..
T Consensus 131 -------~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~---- 198 (415)
T 3lxd_A 131 -------GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVAGEALSE---- 198 (415)
T ss_dssp -------TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHH----
T ss_pred -------CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhcCHHHHH----
Confidence 12221111110 0112 7899999999999999999999999999999998 333321 121111
Q ss_pred cCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-----e
Q 016069 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----E 309 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-----~ 309 (396)
.+.+.+++.+|+++.+ +++++.+ +
T Consensus 199 -------------------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~ 229 (415)
T 3lxd_A 199 -------------------------------------------------FYQAEHRAHGVDLRTGAAMDCIEGDGTKVTG 229 (415)
T ss_dssp -------------------------------------------------HHHHHHHHTTCEEEETCCEEEEEESSSBEEE
T ss_pred -------------------------------------------------HHHHHHHhCCCEEEECCEEEEEEecCCcEEE
Confidence 1245567789999877 8888754 4
Q ss_pred EEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc--------------
Q 016069 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------- 375 (396)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------- 375 (396)
|.++||+++++|.||+|+|+.|++. ++. . .++...+| +.+| ....|+.|+|||+|||+...
T Consensus 230 v~l~dG~~i~aD~Vv~a~G~~p~~~-l~~-~-~gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~ 304 (415)
T 3lxd_A 230 VRMQDGSVIPADIVIVGIGIVPCVG-ALI-S-AGASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESV 304 (415)
T ss_dssp EEESSSCEEECSEEEECSCCEESCH-HHH-H-TTCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSH
T ss_pred EEeCCCCEEEcCEEEECCCCccChH-HHH-h-CCCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechH
Confidence 7889999999999999999999985 444 2 23333356 6666 45678899999999997542
Q ss_pred cCchHHHHHHHHHHhhh
Q 016069 376 YGAAADAQNIADHINSI 392 (396)
Q Consensus 376 ~~a~~~a~~~a~~i~~~ 392 (396)
..|..||+.+|++|.+.
T Consensus 305 ~~A~~qg~~aa~~i~g~ 321 (415)
T 3lxd_A 305 QNANDMATAAAKDICGA 321 (415)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 36889999999999875
No 61
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=5.9e-33 Score=268.53 Aligned_cols=308 Identities=14% Similarity=0.120 Sum_probs=200.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecC--------CCCCccc-ccCCcCceeecccccccc-----CCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERE--------NCYASIW-KKYSYDRLRLHLAKQFCQ-----LPHLPFPS 72 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~--------~~~gg~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 72 (396)
.||++|||||++|+.+|.+++++|.+|+|||+. ..+||+. +..+.|.-.+.....+.. ...+....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 389999999999999999999999999999963 3467742 333333211110000000 00000000
Q ss_pred CCCCCCCHHHHHHHHH-----------HHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEE
Q 016069 73 SYPMFVSRAQFIEYLD-----------HYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 73 ~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~v 141 (396)
. ..-.+...+.++.+ ...++.++++ +.....-++ .....|......+ .. .++++|++
T Consensus 122 ~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~---i~G~a~f~~----~~~v~V~~~~~~~--~~--~~i~a~~i 189 (542)
T 4b1b_A 122 D-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKY---INGLAKLKD----KNTVSYYLKGDLS--KE--ETVTGKYI 189 (542)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE---ECEEEEEEE----TTEEEEEEC--CC--CE--EEEEEEEE
T ss_pred C-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE---EeeeEEEcC----CCcceEeecccCC--ce--EEEeeeeE
Confidence 0 00012233333222 2233445542 222222222 1333344332111 11 68999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCce
Q 016069 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVH 221 (396)
Q Consensus 142 viAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~ 221 (396)
||||| ++|..|+..+.... ..+++.+....... +++++|||+|++|+|+|..++++|.+||++.|. .
T Consensus 190 iIATG--s~P~~P~~~~~~~~--------~~~ts~~~l~l~~l-P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~ 256 (542)
T 4b1b_A 190 LIATG--CRPHIPDDVEGAKE--------LSITSDDIFSLKKD-PGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--I 256 (542)
T ss_dssp EECCC--EEECCCSSSBTHHH--------HCBCHHHHTTCSSC-CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--C
T ss_pred EeccC--CCCCCCCcccCCCc--------cccCchhhhccccC-CceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--c
Confidence 99999 89998865443322 24555555555554 899999999999999999999999999999875 4
Q ss_pred eeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC
Q 016069 222 VLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (396)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~ 301 (396)
.||.++.+++..+ .+.+++.+|+++.+
T Consensus 257 ~L~~~D~ei~~~l-----------------------------------------------------~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 257 VLRGFDQQCAVKV-----------------------------------------------------KLYMEEQGVMFKNG 283 (542)
T ss_dssp SSTTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEEEET
T ss_pred cccccchhHHHHH-----------------------------------------------------HHHHHhhcceeecc
Confidence 6788877666654 35567788888887
Q ss_pred --ceeEECC----eEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-
Q 016069 302 --IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG- 374 (396)
Q Consensus 302 --v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~- 374 (396)
+.+++.. .+.+.++..+++|.|++|+|++||+..+........++.++.+++.+..+.|+.|+|||+||++..
T Consensus 284 ~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~ 363 (542)
T 4b1b_A 284 ILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENV 363 (542)
T ss_dssp CCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTC
T ss_pred eEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCc
Confidence 6666543 256778899999999999999999976633022333555666544447888999999999999865
Q ss_pred cc---CchHHHHHHHHHHhhh
Q 016069 375 LY---GAAADAQNIADHINSI 392 (396)
Q Consensus 375 ~~---~a~~~a~~~a~~i~~~ 392 (396)
+. .|..+++.++++|...
T Consensus 364 p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 364 PELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp CCCHHHHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHhcC
Confidence 23 7889999999999764
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.98 E-value=1.1e-31 Score=259.08 Aligned_cols=306 Identities=14% Similarity=0.112 Sum_probs=202.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-CcCceeeccc----cccc-cCCCCCCCCCCCCCCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (396)
++||+|||||++|+++|..|++.|++|+|||+.+.+||+|... +.+...+... ..+. .+..+..+.......+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5899999999999999999999999999999988889876531 1111000000 0000 00000000000001122
Q ss_pred HHHHH-----------HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE------EEeCEEEE
Q 016069 81 AQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY------YSGRFLVV 143 (396)
Q Consensus 81 ~~~~~-----------~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~------~~~d~vvi 143 (396)
.++.. .+...+++.++++ +.++.+.. + .+.+.|.+.++.. .+ ++||+||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~---~--~~~v~V~~~~G~~------~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFE---D--ETKIRVTPVDGLE------GTVKEDHILDVKNIIV 151 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEES---S--SSEEEEECCTTCT------TCCSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEc---c--CCeEEEEecCCCc------ccccccceEEeCEEEE
Confidence 22222 2334455567665 77776642 2 2566676655411 34 99999999
Q ss_pred eecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceee
Q 016069 144 ASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL 223 (396)
Q Consensus 144 AtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (396)
||| +.|. .+||.+.. ....++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++++ .++
T Consensus 152 AtG--s~p~--~~~g~~~~------~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 219 (478)
T 1v59_A 152 ATG--SEVT--PFPGIEID------EEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIG 219 (478)
T ss_dssp CCC--EEEC--CCTTCCCC------SSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSS
T ss_pred CcC--CCCC--CCCCCCCC------CceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccc
Confidence 999 5552 34444321 112444444443333 37999999999999999999999999999999998 555
Q ss_pred ehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--
Q 016069 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (396)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-- 301 (396)
|..+.++... +.+.+++.+|+++.+
T Consensus 220 ~~~~~~~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~ 246 (478)
T 1v59_A 220 ASMDGEVAKA-----------------------------------------------------TQKFLKKQGLDFKLSTK 246 (478)
T ss_dssp SSSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEECSEE
T ss_pred cccCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCE
Confidence 5544433332 235567789999987
Q ss_pred ceeEEC--C----eEEec-----CCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEe
Q 016069 302 IESIRG--N----EVIFE-----NGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVG 369 (396)
Q Consensus 302 v~~~~~--~----~v~~~-----~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~G 369 (396)
+++++. + .+.++ +++++++|.||+|+|++|++..+ ++ ..+..++++|++.+|. .+.|+.|+|||+|
T Consensus 247 v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~-~~g~~~~~~G~i~vd~-~~~t~~~~IyA~G 324 (478)
T 1v59_A 247 VISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAE-KIGLEVDKRGRLVIDD-QFNSKFPHIKVVG 324 (478)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTT-TTTCCBCTTSCBCCCT-TSBCSSTTEEECG
T ss_pred EEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCch-hcCceeCCCCCEeECc-CCccCCCCEEEee
Confidence 888865 2 25555 45789999999999999999643 44 3344467789888884 4668999999999
Q ss_pred ccccccc---CchHHHHHHHHHHhhh
Q 016069 370 LSRKGLY---GAAADAQNIADHINSI 392 (396)
Q Consensus 370 d~~~~~~---~a~~~a~~~a~~i~~~ 392 (396)
||+..+. .|..||+.+|++|.+.
T Consensus 325 D~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 325 DVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp GGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 9987633 7899999999999864
No 63
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.98 E-value=6.7e-34 Score=265.89 Aligned_cols=272 Identities=17% Similarity=0.187 Sum_probs=192.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
+.+|+|||||+||+++|..|...+.+|+|||+++..+ |....+ +..+. . ..+.+++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l--~~~l~---g---------~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRL--NEIIA---K---------NKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGH--HHHHH---S---------CCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChh--hHHHc---C---------CCCHHHccCC
Confidence 4689999999999999999977889999999988654 111000 00000 0 0111122222
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
..+..++.++++ +.+++|++++.+. . .|++.++ .++.||+||+||| ++|+.|+++|.+.
T Consensus 68 ~~~~~~~~~i~~--~~~~~V~~id~~~--~--~v~~~~g--------~~~~yd~lvlAtG--~~p~~p~i~G~~~----- 126 (385)
T 3klj_A 68 KNDWYEKNNIKV--ITSEFATSIDPNN--K--LVTLKSG--------EKIKYEKLIIASG--SIANKIKVPHADE----- 126 (385)
T ss_dssp CHHHHHHTTCEE--ECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCCCTTCSC-----
T ss_pred CHHHHHHCCCEE--EeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEecC--CCcCCCCCCCCCC-----
Confidence 233445667766 8999999998754 3 4777765 6799999999999 7899888887652
Q ss_pred CCCcceeeccCCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhhcCCh
Q 016069 167 TGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVPC 240 (396)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-----~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~~ 240 (396)
.++.....+.... .+++++|||+|.+|+|+|..|++.|.+|+++++.+ .++++ .+......
T Consensus 127 -----v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~------- 193 (385)
T 3klj_A 127 -----IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLDRDGGLF------- 193 (385)
T ss_dssp -----EECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSCHHHHHH-------
T ss_pred -----eEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHH-------
Confidence 2332222111111 26899999999999999999999999999999998 45444 22222222
Q ss_pred hhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCeEEecCCcEE
Q 016069 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSH 318 (396)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~v~~~~g~~~ 318 (396)
+.+.+++.+|+++.+ ++++ |+++
T Consensus 194 ----------------------------------------------~~~~l~~~gV~~~~~~~v~~i---------g~~~ 218 (385)
T 3klj_A 194 ----------------------------------------------LKDKLDRLGIKIYTNSNFEEM---------GDLI 218 (385)
T ss_dssp ----------------------------------------------HHHHHHTTTCEEECSCCGGGC---------HHHH
T ss_pred ----------------------------------------------HHHHHHhCCCEEEeCCEEEEc---------CeEE
Confidence 235567788999876 5555 6788
Q ss_pred eCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------ccCchHHHHHHHHHHhh
Q 016069 319 HFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINS 391 (396)
Q Consensus 319 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------~~~a~~~a~~~a~~i~~ 391 (396)
++|.||+|+|++|++. ++. . .++..++| +.+| ..+.|+.|+|||+|||+.. ...|..||+.+|.+|.+
T Consensus 219 ~~D~vv~a~G~~p~~~-~~~-~-~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 219 RSSCVITAVGVKPNLD-FIK-D-TEIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp HHSEEEECCCEEECCG-GGT-T-SCCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred ecCeEEECcCcccChh-hhh-h-cCCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 9999999999999984 444 3 23333456 6666 4667899999999999763 23799999999999987
Q ss_pred hc
Q 016069 392 IL 393 (396)
Q Consensus 392 ~l 393 (396)
.-
T Consensus 294 ~~ 295 (385)
T 3klj_A 294 ED 295 (385)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 64
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.98 E-value=9.4e-32 Score=257.90 Aligned_cols=300 Identities=15% Similarity=0.182 Sum_probs=200.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeecccc----ccccCCCCCCCCCCCCCCCHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRAQ 82 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (396)
+||+|||||++|+++|..|++.|.+|+|||+.+.+||+|.. .+.+...+.... .+.. ..+..+.. ....+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK-GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-CCccCHHH
Confidence 79999999999999999999999999999999889987753 112211000000 0000 00000000 00012222
Q ss_pred HH-----------HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016069 83 FI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (396)
Q Consensus 83 ~~-----------~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p 151 (396)
+. ..+...+++.+++. +.++.+ .+ + ...+.|.+ ++ .++.||+||+||| +.|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~--~~~~~v~~-~g--------~~~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL--S--ERKVLVEE-TG--------EELEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES--S--SSEEEETT-TC--------CEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee--c--CCeEEEee-CC--------EEEEecEEEECCC--CCC
Confidence 22 22334455566664 555543 22 2 24444443 32 5789999999999 788
Q ss_pred CCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHH
Q 016069 152 FTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLG 231 (396)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~ 231 (396)
..|+++|.+.. ..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+..+.
T Consensus 142 ~~~~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~~~~ 211 (455)
T 2yqu_A 142 LIPPWAQVDYE--------RVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDLEVS 211 (455)
T ss_dssp CCCTTBCCCSS--------SEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHH
T ss_pred CCCCCCCCCcC--------cEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCHHHH
Confidence 88887775432 2455444443333 37899999999999999999999999999999988 55554443333
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-
Q 016069 232 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN- 308 (396)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~- 308 (396)
..+ .+.+++.+|+++.+ +++++.+
T Consensus 212 ~~l-----------------------------------------------------~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 212 RAA-----------------------------------------------------ERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTCEEECSCCEEEEEEET
T ss_pred HHH-----------------------------------------------------HHHHHHCCCEEEECCEEEEEEEeC
Confidence 222 34455668888887 7777643
Q ss_pred -e--EEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---CchHH
Q 016069 309 -E--VIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAAD 381 (396)
Q Consensus 309 -~--v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~ 381 (396)
+ +.+++|+++++|.||+|+|++|+...+ ++ ..+...+++|++.++. ...|+.|+|||+||++..+. .|..|
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~-~~g~~~~~~g~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~ 316 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLE-NAGLSTDERGRIPVDE-HLRTRVPHIYAIGDVVRGPMLAHKASEE 316 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGG-GGTCCCCTTSCCCCCT-TSBCSSTTEEECGGGSSSCCCHHHHHHH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChh-hcCCccCCCCcEeECC-CcccCCCCEEEEecCCCCccCHHHHHHh
Confidence 3 445688899999999999999998653 33 3233456678888874 45688999999999987643 68899
Q ss_pred HHHHHHHHhhh
Q 016069 382 AQNIADHINSI 392 (396)
Q Consensus 382 a~~~a~~i~~~ 392 (396)
|+.+|.+|.+.
T Consensus 317 g~~aa~~i~~~ 327 (455)
T 2yqu_A 317 GIAAVEHMVRG 327 (455)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHcCC
Confidence 99999999863
No 65
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.98 E-value=4.8e-32 Score=261.77 Aligned_cols=298 Identities=16% Similarity=0.170 Sum_probs=200.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccc----cccccCCCCCCCCCCCCCCCHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (396)
++||+|||||++|+++|..|++.|.+|+|||+ ..+||.|.. .+++...+... ..+.....+.+..... ..+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 57999999999999999999999999999999 578886642 22221110000 0000000000000000 11222
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe-ecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.+..++.....+.+++. ..+ .+..++. . .+... ++ ..+.+|++|+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~~----~--~v~v~~~~--------~~~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI--YES-RAVFVDE----H--TLELSVTG--------ERISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEET----T--EEEETTTC--------CEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEeeC----C--EEEEecCC--------eEEEeCEEEEccC--C
Confidence 22333444455556653 333 4544432 2 25554 32 6799999999999 7
Q ss_pred CCC-CCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhh
Q 016069 150 NPF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV 228 (396)
Q Consensus 150 ~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~ 228 (396)
.|. .|.++|.+.. .+...+..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..++..+.
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~ 232 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFDLEK-LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY 232 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGGCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHHhHHh-cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH
Confidence 788 8888876532 33333333332 38999999999999999999999999999999988 44444443
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE
Q 016069 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~ 306 (396)
.+... +.+.+++.+|+++.+ +++++
T Consensus 233 ~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~V~~i~ 259 (484)
T 3o0h_A 233 DLRQL-----------------------------------------------------LNDAMVAKGISIIYEATVSQVQ 259 (484)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHHTCEEESSCCEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEE
Confidence 33222 235566678999887 88887
Q ss_pred CC----eEEecCCcEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---Cc
Q 016069 307 GN----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GA 378 (396)
Q Consensus 307 ~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 378 (396)
.+ .+.+++|+++++|.||+|+|++|++..+ ++ ..+..++++|++.+| ....|+.|+|||+|||+..+. .|
T Consensus 260 ~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~-~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A 337 (484)
T 3o0h_A 260 STENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLE-RAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVA 337 (484)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHH-HHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHH
T ss_pred eeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChh-hcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHH
Confidence 65 4778899999999999999999999654 33 324456788998888 455689999999999987544 78
Q ss_pred hHHHHHHHHHHhhh
Q 016069 379 AADAQNIADHINSI 392 (396)
Q Consensus 379 ~~~a~~~a~~i~~~ 392 (396)
..||+.+|++|.+.
T Consensus 338 ~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 338 IHDAMCFVKNAFEN 351 (484)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999864
No 66
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.98 E-value=2.3e-32 Score=261.87 Aligned_cols=290 Identities=18% Similarity=0.224 Sum_probs=198.7
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
+||+|||||++|+++|..|++. |.+|+|||+.+..+..... +.......... ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-----~~~~~~g~~~~-------------~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-----IALYLGKEIKN-------------NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-----HHHHHTTCBGG-------------GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-----chhhhcCCccc-------------CCHHHhhh
Confidence 5899999999999999999998 9999999998754421100 00000000000 00011111
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.+.+.+++.++++ +.++.|+.++.++ +.+.+..... |+. .+++||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--s~p~~p~i~g~~~~--- 128 (452)
T 2cdu_A 63 SSPEELSNLGANV--QMRHQVTNVDPET--KTIKVKDLIT---NEE--KTEAYDKLIMTTG--SKPTVPPIPGIDSS--- 128 (452)
T ss_dssp CCHHHHHHTTCEE--EESEEEEEEEGGG--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred cCHHHHHHcCCEE--EeCCEEEEEEcCC--CEEEEEecCC---Cce--EEEECCEEEEccC--CCcCCCCCCCCCCC---
Confidence 1223344567665 8899999998765 5544433111 111 6799999999999 78888888887532
Q ss_pred CCCCcceeeccCCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeee-hhhhHHHHHHhhcCC
Q 016069 166 ATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS-REMVYLGLVLLRYVP 239 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-----~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p-~~~~~~~~~~~~~~~ 239 (396)
..++...+.+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++ ..+.++...
T Consensus 129 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~------ 196 (452)
T 2cdu_A 129 -----RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFDKEFTDI------ 196 (452)
T ss_dssp -----TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSCHHHHHH------
T ss_pred -----CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhhhhHHHH------
Confidence 234433221111 1247899999999999999999999999999999988 4444 222222221
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC--CeE--Eec
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEV--IFE 313 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~--~~v--~~~ 313 (396)
+.+.+++.+|+++.+ +++++. +.+ +..
T Consensus 197 -----------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~ 229 (452)
T 2cdu_A 197 -----------------------------------------------LAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL 229 (452)
T ss_dssp -----------------------------------------------HHHHHHHTTCEEEESSCEEEEEEETTEEEEEET
T ss_pred -----------------------------------------------HHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe
Confidence 245567789999887 888865 333 334
Q ss_pred CCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------------ccCchH
Q 016069 314 NGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAA 380 (396)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~ 380 (396)
+|+++++|.||+|+|++|++. +++ . ...++++|++.+|. .+.|+.|+|||+|||+.. ...|..
T Consensus 230 ~g~~i~~D~vv~a~G~~p~~~-ll~-~-~l~~~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 305 (452)
T 2cdu_A 230 DGKEIKSDIAILCIGFRPNTE-LLK-G-KVAMLDNGAIITDE-YMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVR 305 (452)
T ss_dssp TSCEEEESEEEECCCEEECCG-GGT-T-TSCBCTTSCBCCCT-TSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHH
T ss_pred CCCEEECCEEEECcCCCCCHH-HHH-H-hhhcCCCCCEEECC-CcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHH
Confidence 888999999999999999995 455 4 34456789888884 567899999999999863 237899
Q ss_pred HHHHHHHHHhhh
Q 016069 381 DAQNIADHINSI 392 (396)
Q Consensus 381 ~a~~~a~~i~~~ 392 (396)
||+.+|++|.+.
T Consensus 306 ~g~~aa~~i~g~ 317 (452)
T 2cdu_A 306 QGRLVGLNLTED 317 (452)
T ss_dssp HHHHHHHTSSSC
T ss_pred HHHHHHHHhCCC
Confidence 999999999864
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.98 E-value=5.9e-32 Score=261.16 Aligned_cols=303 Identities=17% Similarity=0.163 Sum_probs=198.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC---C------CCCccccc-CCcCceeecccccc----ccCCCCCCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE---N------CYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFP 71 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~---~------~~gg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~ 71 (396)
.++||+|||||++|+++|..|++.|.+|+|||+. + .+||+|.. .+.|...+...... .....+...
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 3689999999999999999999999999999942 1 37887753 22221111000000 000000000
Q ss_pred CCCCCCCCHHHHHHHHHHH-----------HHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCE
Q 016069 72 SSYPMFVSRAQFIEYLDHY-----------VSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (396)
Q Consensus 72 ~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~ 140 (396)
.......+...+.++...+ ....+++ .+...+..++ . ..+.+.+.++ + .+++||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~--~--~~v~v~~~~g----~---~~~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVD--S--HTLLAKLKSG----E---RTITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE--T--TEEEEECTTC----C---EEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEcc--C--CEEEEEeCCC----e---EEEEcCE
Confidence 0101123444444443332 2333444 2333343333 1 4455555443 1 5799999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 141 LVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 141 vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
||+||| +.|..|+++|.+.+ .++..++..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-- 219 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFSLDR-EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-- 219 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTTCSS-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhhhhh-cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--
Confidence 999999 78999999987654 233333333333 3789999999999999999999999999999885
Q ss_pred eeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEcc
Q 016069 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (396)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ 300 (396)
..++..+.++... +.+.+++.+|+++.
T Consensus 220 ~~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~ 246 (483)
T 3dgh_A 220 IVLRGFDQQMAEL-----------------------------------------------------VAASMEERGIPFLR 246 (483)
T ss_dssp CSSTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCCEEE
T ss_pred CCCcccCHHHHHH-----------------------------------------------------HHHHHHhCCCEEEe
Confidence 3445444433332 23556778888888
Q ss_pred C--ceeEEC--Ce---EEecCCc-----EEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEE
Q 016069 301 G--IESIRG--NE---VIFENGH-----SHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYC 367 (396)
Q Consensus 301 ~--v~~~~~--~~---v~~~~g~-----~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya 367 (396)
+ +.+++. ++ +.+.++. ++++|.||+|+|++|++..+ ++ ..+..+++ |++.+| ..+.|+.|+|||
T Consensus 247 ~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~-~~gl~~~~-G~i~vd-~~~~t~~~~IyA 323 (483)
T 3dgh_A 247 KTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLP-NAGVTVQK-DKIPVD-SQEATNVANIYA 323 (483)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGG-GTTCCCBT-TBBCCC-TTCBCSSTTEEE
T ss_pred CCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCch-hcCccccC-CEEEEC-cCCccCCCCEEE
Confidence 7 777764 22 6666654 78999999999999999655 24 32344555 888887 445689999999
Q ss_pred Eeccccc----ccCchHHHHHHHHHHhhh
Q 016069 368 VGLSRKG----LYGAAADAQNIADHINSI 392 (396)
Q Consensus 368 ~Gd~~~~----~~~a~~~a~~~a~~i~~~ 392 (396)
+|||+.+ ...|..||+.+|++|.+.
T Consensus 324 ~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 324 VGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9999743 237899999999999864
No 68
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.98 E-value=6.2e-33 Score=262.34 Aligned_cols=282 Identities=19% Similarity=0.207 Sum_probs=196.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCC--eEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
++|+|||||++|+++|..|+++|.+ |+|+|+.+..+ |....+ ...+.. ....+... +..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~l--~~~~~~--g~~~~~~~--~~~------ 63 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPSL--SKAVLD--GSLERPPI--LAE------ 63 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGGG--GTHHHH--TSSSSCCB--SSC------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCccc--cHHHhC--CCCCHHHh--cCC------
Confidence 5999999999999999999999987 99999987544 111000 000000 00000011 011
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.....+.+++. +.+++|+.++... ..|.+.++ .++.||+||+||| +.|+.|++||.+..
T Consensus 64 --~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~ipG~~~~--- 122 (410)
T 3ef6_A 64 --ADWYGEARIDM--LTGPEVTALDVQT----RTISLDDG--------TTLSADAIVIATG--SRARTMALPGSQLP--- 122 (410)
T ss_dssp --TTHHHHTTCEE--EESCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred --HHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC--------CEEECCEEEEccC--CcccCCCCCCcccc---
Confidence 12234456665 8899999998653 34777665 6799999999999 77888888886532
Q ss_pred CCCCcceeeccCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhhcCC
Q 016069 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVP 239 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~-----~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~ 239 (396)
..++.....+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ..+++ .+..+...
T Consensus 123 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~------ 190 (410)
T 3ef6_A 123 -----GVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRVLGRRIGAW------ 190 (410)
T ss_dssp -----TEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHHHCHHHHHH------
T ss_pred -----ceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhhcCHHHHHH------
Confidence 22322111110 11237899999999999999999999999999999998 34433 22222221
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC----eEEec
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFE 313 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~----~v~~~ 313 (396)
+.+.+++.+|+++.+ +++++.+ ++.++
T Consensus 191 -----------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~ 223 (410)
T 3ef6_A 191 -----------------------------------------------LRGLLTELGVQVELGTGVVGFSGEGQLEQVMAS 223 (410)
T ss_dssp -----------------------------------------------HHHHHHHHTCEEECSCCEEEEECSSSCCEEEET
T ss_pred -----------------------------------------------HHHHHHHCCCEEEeCCEEEEEeccCcEEEEEEC
Confidence 235566778999877 8888766 58899
Q ss_pred CCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc------------cCchHH
Q 016069 314 NGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL------------YGAAAD 381 (396)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------------~~a~~~ 381 (396)
||+++++|.||+|+|+.|++. +++ ..+...+ +| +.+| ....|+.|+|||+|||+... ..|..|
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~~-l~~-~~gl~~~-~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~q 298 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPADQ-LAR-QAGLACD-RG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQ 298 (410)
T ss_dssp TSCEEECSEEEECSCEEECCH-HHH-HTTCCBS-SS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecHH-HHH-hCCCccC-Ce-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHH
Confidence 999999999999999999985 444 2122333 55 6666 45578999999999997642 478999
Q ss_pred HHHHHHHHhhhc
Q 016069 382 AQNIADHINSIL 393 (396)
Q Consensus 382 a~~~a~~i~~~l 393 (396)
|+.+|++|.+.-
T Consensus 299 g~~aa~~i~g~~ 310 (410)
T 3ef6_A 299 AAAVAAAILGKN 310 (410)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999998753
No 69
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=1.2e-32 Score=265.70 Aligned_cols=300 Identities=17% Similarity=0.209 Sum_probs=196.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
+.+|||||||+||+++|++|.+.+++|+|||+++.+- | .| .++... ....+..++...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~--~-----------~P-lL~~va--------~G~l~~~~i~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL--F-----------TP-LLPSAP--------VGTVDEKSIIEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE--C-----------GG-GGGGTT--------TTSSCGGGGEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc--c-----------cc-chhHHh--------hccccHHHhhhh
Confidence 5689999999999999999999999999999986210 0 00 011110 001111111111
Q ss_pred HHHHHH--hcCCcceeeeceEEEEEEEcCCCCceEEEEeecC------------CCCceeeEEEEeCEEEEeecCCCCCC
Q 016069 87 LDHYVS--HFNIVPSIRYQRSVESASYDEATNMWNVKASNLL------------SPGRVIEEYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 87 l~~~~~--~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~------------~~g~~~~~~~~~d~vviAtG~~s~p~ 152 (396)
+..... +.++. +...+|++|+.+. +...+...++. ..++. .++.||+||+||| +.|+
T Consensus 100 ~~~~~~~~~~~v~---~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~--~~i~YD~LViAtG--s~~~ 170 (502)
T 4g6h_A 100 IVNFALKKKGNVT---YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEP--AEIKYDYLISAVG--AEPN 170 (502)
T ss_dssp HHHHHTTCSSCEE---EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCC--EEEECSEEEECCC--CEEC
T ss_pred HHHHHHhhcCCeE---EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCc--eEEeCCEEEEcCC--cccc
Confidence 222221 12332 4567899999865 55333321100 00111 6899999999999 8899
Q ss_pred CCCCCCccccccCCCCCcceeecc----------CCCCC-C--CCCCCeEEEEcCCCCHHHHHHHHHhhc----------
Q 016069 153 TPDIRGLSSFCSSATGTGEVIHST----------QYKNG-K--PYGGKNVLVVGSGNSGMEIALDLANHA---------- 209 (396)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~-~--~~~~~~i~VvG~G~~g~e~a~~l~~~g---------- 209 (396)
.+.+||.++.+..++......... ..... . .....+++|||+|++|+|+|..|++.+
T Consensus 171 ~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~ 250 (502)
T 4g6h_A 171 TFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPA 250 (502)
T ss_dssp CTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHH
T ss_pred cCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhccc
Confidence 999999876421111110000000 00000 0 011347999999999999999998753
Q ss_pred ----CceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCc
Q 016069 210 ----AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDA 285 (396)
Q Consensus 210 ----~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
.+|+++++.+ .++|..+..++..+
T Consensus 251 ~~~~~~V~lve~~~-~il~~~~~~~~~~~--------------------------------------------------- 278 (502)
T 4g6h_A 251 LAEEVQIHLVEALP-IVLNMFEKKLSSYA--------------------------------------------------- 278 (502)
T ss_dssp HHHHCEEEEECSSS-SSSTTSCHHHHHHH---------------------------------------------------
T ss_pred ccccceeEEecccc-ccccCCCHHHHHHH---------------------------------------------------
Confidence 4699999998 56676655444433
Q ss_pred hhhhhhcCCCeEEccC--ceeEECCeEEec----CC----cEEeCcEEEECCCCCCCc--ccccccCCCCCCCCCCCcCC
Q 016069 286 GTCEKIKSGQIQVLPG--IESIRGNEVIFE----NG----HSHHFDSIVFCTGFKRST--NVWLKQGDDSMLNDDGIPKQ 353 (396)
Q Consensus 286 ~~~~~~~~~~i~v~~~--v~~~~~~~v~~~----~g----~~~~~D~vi~atG~~~~~--~~~~~~~~~~~~~~~g~~~~ 353 (396)
.+.+++.+|+++.+ |++++++++.+. || +++++|.||||+|.+|+. ..+.. ......+.+|.+.+
T Consensus 279 --~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~-~~~~~~~~~g~I~V 355 (502)
T 4g6h_A 279 --QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFK-KIPEQNSSKRGLAV 355 (502)
T ss_dssp --HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHH-HSGGGTTCCSSEEB
T ss_pred --HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHH-hccccccCCCceeE
Confidence 45678889999998 999999876553 55 368999999999999984 22322 22344677788888
Q ss_pred CCCCCccCCCceEEEecccccc-----cCchHHHHHHHHHHhhh
Q 016069 354 SYPNHWKGKNGLYCVGLSRKGL-----YGAAADAQNIADHINSI 392 (396)
Q Consensus 354 ~~~~~~~~~~~vya~Gd~~~~~-----~~a~~~a~~~a~~i~~~ 392 (396)
|...+.++.|+|||+|||+..+ ..|.+||..+|+||.+.
T Consensus 356 d~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 356 NDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp CTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 8666667899999999997652 27899999999999753
No 70
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=1.3e-31 Score=256.35 Aligned_cols=287 Identities=17% Similarity=0.183 Sum_probs=195.9
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
+||+|||||++|+++|..|++. |.+|+|||+.+..+.... . .+..+. ... ....++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~----~~~~~~--~~~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-----G----MQLYLE--GKV---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-----G----HHHHHT--TSS---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-----c----chhhhc--Ccc---------CCHHHhhc
Confidence 4899999999999999999998 899999999876541100 0 000000 000 01111111
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEE-eecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
+..+.+++.++++ +.++.|++++.+. +.+.+.. .++ +. .+++||+||+||| +.|..|++||.+..
T Consensus 61 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~~~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~-- 126 (447)
T 1nhp_A 61 MTGEKMESRGVNV--FSNTEITAIQPKE--HQVTVKDLVSG----EE--RVENYDKLIISPG--AVPFELDIPGKDLD-- 126 (447)
T ss_dssp CCHHHHHHTTCEE--EETEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCCSTTTTSB--
T ss_pred CCHHHHHHCCCEE--EECCEEEEEeCCC--CEEEEEecCCC----ce--EEEeCCEEEEcCC--CCcCCCCCCCCCCC--
Confidence 1223344567665 7899999998754 5543333 112 21 4589999999999 78888888887532
Q ss_pred CCCCCcceeeccCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhh
Q 016069 165 SATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLR 236 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~-------~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~ 236 (396)
..++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++. .+.++.
T Consensus 127 ------~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~----- 194 (447)
T 1nhp_A 127 ------NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYLDKEFT----- 194 (447)
T ss_dssp ------SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTCCHHHH-----
T ss_pred ------CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccCCHHHH-----
Confidence 23433222110 11147899999999999999999999999999999988 33332 111111
Q ss_pred cCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe-E--E
Q 016069 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-V--I 311 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~-v--~ 311 (396)
..+.+.+++.+|+++.+ +++++.++ + +
T Consensus 195 ------------------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v 226 (447)
T 1nhp_A 195 ------------------------------------------------DVLTEEMEANNITIATGETVERYEGDGRVQKV 226 (447)
T ss_dssp ------------------------------------------------HHHHHHHHTTTEEEEESCCEEEEECSSBCCEE
T ss_pred ------------------------------------------------HHHHHHHHhCCCEEEcCCEEEEEEccCcEEEE
Confidence 11245677789999887 88887552 2 3
Q ss_pred ecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------------ccCc
Q 016069 312 FENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGA 378 (396)
Q Consensus 312 ~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a 378 (396)
..+++++++|.||+|+|++|++. +++ . ...++++|++.+|. .+.|+.|+|||+|||+.. ...|
T Consensus 227 ~~~~~~i~~d~vi~a~G~~p~~~-~~~-~-~~~~~~~G~i~Vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A 302 (447)
T 1nhp_A 227 VTDKNAYDADLVVVAVGVRPNTA-WLK-G-TLELHPNGLIKTDE-YMRTSEPDVFAVGDATLIKYNPADTEVNIALATNA 302 (447)
T ss_dssp EESSCEEECSEEEECSCEEESCG-GGT-T-TSCBCTTSCBCCCT-TCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHH
T ss_pred EECCCEEECCEEEECcCCCCChH-HHH-h-hhhhcCCCcEEECc-cccCCCCCEEEeeeEEEeeccCCCCceechhHHHH
Confidence 34678899999999999999985 455 3 23456788888884 566789999999999852 2378
Q ss_pred hHHHHHHHHHHhhh
Q 016069 379 AADAQNIADHINSI 392 (396)
Q Consensus 379 ~~~a~~~a~~i~~~ 392 (396)
..||+.+|++|.+.
T Consensus 303 ~~qg~~aa~~i~g~ 316 (447)
T 1nhp_A 303 RKQGRFAVKNLEEP 316 (447)
T ss_dssp HHHHHHHHHTSSSC
T ss_pred HHHHHHHHHhhcCC
Confidence 99999999999863
No 71
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=9.5e-32 Score=256.14 Aligned_cols=275 Identities=16% Similarity=0.196 Sum_probs=188.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++ .+....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHHH
Confidence 46899999999999999999999999999999999899877532 11 1112245666
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+..+.++++++++ +.++.|. .. +++.+ ..+.||+||+|||.. .|+.+.++|.+..
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~--------~~--v~~~~---------~~~~~d~vvlAtG~~-~~~~~~ipG~~~~--- 231 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG--------RD--ASLPE---------LRRKHVAVLVATGVY-KARDIKAPGSGLG--- 231 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT--------TT--BCHHH---------HHSSCSEEEECCCCC-EECCTTCSCCTTT---
T ss_pred HHHHHHHHCCcEE--EeCCEec--------cE--EEhhH---------hHhhCCEEEEecCCC-CCCCCCCCCCcCC---
Confidence 6667777778765 7766551 11 33322 235799999999952 4667778776531
Q ss_pred CCCCcceeeccC---------CCC--------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcC-ceEEEEecCceeeehhh
Q 016069 166 ATGTGEVIHSTQ---------YKN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPVHVLSREM 227 (396)
Q Consensus 166 ~~~~~~~~~~~~---------~~~--------~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~-~v~~~~r~~~~~~p~~~ 227 (396)
+ +++..+ +.. .....+++++|||+|.+|+|+|..+.+.|. +|+++.|++...+|...
T Consensus 232 ----g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~ 306 (456)
T 2vdc_G 232 ----N-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQ 306 (456)
T ss_dssp ----T-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCH
T ss_pred ----C-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCH
Confidence 1 222111 000 122458999999999999999999999987 49999998843344433
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeE
Q 016069 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (396)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~ 305 (396)
.++ +.+++.+|+++.+ +.++
T Consensus 307 ~e~----------------------------------------------------------~~~~~~Gv~~~~~~~~~~i 328 (456)
T 2vdc_G 307 REV----------------------------------------------------------AHAEEEGVEFIWQAAPEGF 328 (456)
T ss_dssp HHH----------------------------------------------------------HHHHHTTCEEECCSSSCCE
T ss_pred HHH----------------------------------------------------------HHHHHCCCEEEeCCCceEE
Confidence 211 1122234444433 3333
Q ss_pred ECCe----EEe------------------cCC--cEEeCcEEEECCCCCCCccc-ccccCCCCCCCCCCCcCCCCCCCcc
Q 016069 306 RGNE----VIF------------------ENG--HSHHFDSIVFCTGFKRSTNV-WLKQGDDSMLNDDGIPKQSYPNHWK 360 (396)
Q Consensus 306 ~~~~----v~~------------------~~g--~~~~~D~vi~atG~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 360 (396)
..++ +.+ .+| .++++|.||+|+|+.|+... ++. .....++++|.+.++.....|
T Consensus 329 ~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~-~~gl~~~~~G~i~vd~~~~~T 407 (456)
T 2vdc_G 329 TGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFD-EPELKVTRWGTLLVDHRTKMT 407 (456)
T ss_dssp EEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH-STTSCBCTTSSBCCCTTTCBC
T ss_pred eCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcc-cCCeeECCCCCEEECCCCCcC
Confidence 2221 111 123 47899999999999998753 555 434557888999988554679
Q ss_pred CCCceEEEeccccc---ccCchHHHHHHHHHHhhhc
Q 016069 361 GKNGLYCVGLSRKG---LYGAAADAQNIADHINSIL 393 (396)
Q Consensus 361 ~~~~vya~Gd~~~~---~~~a~~~a~~~a~~i~~~l 393 (396)
+.|+|||+||++.+ +..|+.+|+.+|.+|.+.|
T Consensus 408 s~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L 443 (456)
T 2vdc_G 408 NMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYA 443 (456)
T ss_dssp SSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999876 3479999999999998876
No 72
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=4.1e-32 Score=256.41 Aligned_cols=281 Identities=17% Similarity=0.205 Sum_probs=192.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
++|+|||||++|+++|..|++.|. +|+|||+.+..+ |....+ ...+.... ..+.. +..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~l~~~--~~~~~---------~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPPL--SKAYLKSG--GDPNS---------LMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGGG--GTGGGGSC--CCTTS---------SBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCccC--CHHHHCCC--CCHHH---------ccC
Confidence 689999999999999999999998 899999987543 111000 00010000 00000 001
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.......+.+++. +. ++|+.++... . .+.+.++ ..+.||+||+||| +.|+.|+++|.+..
T Consensus 62 ~~~~~~~~~~i~~--~~-~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~i~g~~~~--- 121 (404)
T 3fg2_P 62 RPEKFFQDQAIEL--IS-DRMVSIDREG--R--KLLLASG--------TAIEYGHLVLATG--ARNRMLDVPNASLP--- 121 (404)
T ss_dssp SCHHHHHHTTEEE--EC-CCEEEEETTT--T--EEEESSS--------CEEECSEEEECCC--EEECCCCSTTTTST---
T ss_pred CCHHHHHhCCCEE--EE-EEEEEEECCC--C--EEEECCC--------CEEECCEEEEeeC--CCccCCCCCCCCCC---
Confidence 1122334456654 66 8999998654 3 4777765 6789999999999 68888888886532
Q ss_pred CCCCcceeeccCCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhhcCC
Q 016069 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVP 239 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~ 239 (396)
..++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+++ .+..+.
T Consensus 122 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~~~~~~-------- 187 (404)
T 3fg2_P 122 -----DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVVTPEIS-------- 187 (404)
T ss_dssp -----TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSCHHHH--------
T ss_pred -----cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhccCHHHH--------
Confidence 2222111111 111237899999999999999999999999999999988 33322 111111
Q ss_pred hhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-----eEEe
Q 016069 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF 312 (396)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-----~v~~ 312 (396)
..+.+.+++.+|+++.+ +++++.+ +|.+
T Consensus 188 ---------------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~ 222 (404)
T 3fg2_P 188 ---------------------------------------------SYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVL 222 (404)
T ss_dssp ---------------------------------------------HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE
T ss_pred ---------------------------------------------HHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEe
Confidence 11245667789999887 8888654 4888
Q ss_pred cCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc-------------cCch
Q 016069 313 ENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAA 379 (396)
Q Consensus 313 ~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~ 379 (396)
+||+++++|.||+|+|+.|++. +++ . .++...+| +.+| ....|+.|+|||+|||+... ..|.
T Consensus 223 ~dG~~i~aD~Vv~a~G~~p~~~-l~~-~-~gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~ 297 (404)
T 3fg2_P 223 SDGNTLPCDLVVVGVGVIPNVE-IAA-A-AGLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNAT 297 (404)
T ss_dssp TTSCEEECSEEEECCCEEECCH-HHH-H-TTCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHH
T ss_pred CCCCEEEcCEEEECcCCccCHH-HHH-h-CCCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHH
Confidence 9999999999999999999984 444 2 22322356 6666 45668899999999997642 3688
Q ss_pred HHHHHHHHHHhhh
Q 016069 380 ADAQNIADHINSI 392 (396)
Q Consensus 380 ~~a~~~a~~i~~~ 392 (396)
.||+.+|++|.+.
T Consensus 298 ~qg~~aa~~i~g~ 310 (404)
T 3fg2_P 298 DQARCVAARLTGD 310 (404)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999875
No 73
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=6.7e-31 Score=252.85 Aligned_cols=349 Identities=18% Similarity=0.264 Sum_probs=206.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-----CCeEEEecCCCCCcccccCCc-Cceeeccc--cccccCCC--CCC------
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLA--KQFCQLPH--LPF------ 70 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-----~~v~lie~~~~~gg~~~~~~~-~~~~~~~~--~~~~~~~~--~~~------ 70 (396)
.+||+|||||++|+++|..|++.| .+|+|||+.+.+| |...++ +...+..+ ..+..+.. ..+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999877 655433 22222111 00000000 000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCC-CCce--EEEEeecCCCCceeeEEEEe
Q 016069 71 ---------PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGRVIEEYYSG 138 (396)
Q Consensus 71 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~--~v~~~~~~~~g~~~~~~~~~ 138 (396)
..+...++.+.++.+|+.+++++++..+ +++++|++++.+++ .+.| .|.+.++. |+. .++.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~~~V~~i~~~~~~~~~~~~~V~~~~g~--g~~--~~~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQS--RYGEEVLRIEPMLSAGQVEALRVISRNAD--GEE--LVRTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTE--EESEEEEEEEEEEETTEEEEEEEEEEETT--SCE--EEEEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEEecCCCceEEEEEEEecCC--Cce--EEEEe
Confidence 0011235678899999999999888666 99999999988621 2444 67776653 121 48999
Q ss_pred CEEEEeecCCCCCCCCCCCCccccccCCCCCc--ceeeccCCCC-CCCC-----CCCeEEEEcCCCCHHHHHHHHHhh--
Q 016069 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTG--EVIHSTQYKN-GKPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (396)
Q Consensus 139 d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~-~~~~-----~~~~i~VvG~G~~g~e~a~~l~~~-- 208 (396)
|+||+||| +.|.+|.. .+.+ .+ ..+|+..+.. ...+ .+++|+|||+|.+|+|+|..|.+.
T Consensus 182 d~lVlAtG--~~p~~p~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQV--FRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCGG--GGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcch--hhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 57776652 2333 33 4677766543 1222 488999999999999999999999
Q ss_pred cCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHH---HHHHHhccccccCcCCCCCCcchhhhccCCccccCc
Q 016069 209 AAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVM---LSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDA 285 (396)
Q Consensus 209 g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
+.+|+++.|++ .++|.+...+.+.+ +.+...+.+... ....+....... .......... ...+..
T Consensus 252 ~~~Vt~v~r~~-~~~p~~~~~~~~~~---~~p~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~ 319 (463)
T 3s5w_A 252 SVQADMILRAS-ALKPADDSPFVNEV---FAPKFTDLIYSREHAERERLLREYHNT--NYSVVDTDLI------ERIYGV 319 (463)
T ss_dssp TEEEEEECSSS-SCCBCCCCHHHHGG---GSHHHHHHHHHSCHHHHHHHHHHTGGG--TSSCBCHHHH------HHHHHH
T ss_pred CCeEEEEEeCC-CCcCccCCccchhc---cChhHHHHHhcCCHHHHHHHHHHhhcc--CCCcCCHHHH------HHHHHH
Confidence 88999999999 46776554443332 122222211110 000010000000 0000000000 000111
Q ss_pred hhhhhhc-CCCeEEccC--ceeEECC--e--EEec---CCcE--EeCcEEEECCCCCCCc-ccccccCCCCCCCCCCCcC
Q 016069 286 GTCEKIK-SGQIQVLPG--IESIRGN--E--VIFE---NGHS--HHFDSIVFCTGFKRST-NVWLKQGDDSMLNDDGIPK 352 (396)
Q Consensus 286 ~~~~~~~-~~~i~v~~~--v~~~~~~--~--v~~~---~g~~--~~~D~vi~atG~~~~~-~~~~~~~~~~~~~~~g~~~ 352 (396)
.+.+.+. ..+|+++.+ |++++.+ . +.+. +|+. +++|.||+|||++|+. ..++. ...... |.+.
T Consensus 320 l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~-~l~~~~---g~i~ 395 (463)
T 3s5w_A 320 FYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLE-PLAEYL---GDHE 395 (463)
T ss_dssp HHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTG-GGGGGB---C--C
T ss_pred HHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhH-HHHHHh---CCcc
Confidence 1122222 268899888 7777653 2 5665 6764 8999999999999992 13333 211111 5666
Q ss_pred CCCCCCccC----CCceEEEeccccc--------ccCchHHHHHHHHHH
Q 016069 353 QSYPNHWKG----KNGLYCVGLSRKG--------LYGAAADAQNIADHI 389 (396)
Q Consensus 353 ~~~~~~~~~----~~~vya~Gd~~~~--------~~~a~~~a~~~a~~i 389 (396)
++....... .|+||++|||... ...|.+++..++..+
T Consensus 396 v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 396 IGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLY 444 (463)
T ss_dssp CCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHH
Confidence 664444332 5679999998542 225556665554443
No 74
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=7.5e-32 Score=256.37 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=192.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
.+||+|||||++|+++|..|++.|. +|+|+|+.+..+ |.... ....+.. ... ....+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--l~~~~~~--~~~---------~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLPP--LSKAYLA--GKA---------TAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSGG--GGTTTTT--TCS---------CSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCCC--CcHHHhC--CCC---------ChHHhc
Confidence 4799999999999999999999998 799999887543 11000 0000000 000 000110
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
....+.+++.+++. +.++.|+.++... . .|.+.++ .++.||+||+||| +.|+.|+++|.+..
T Consensus 64 ~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~--~v~~~~g--------~~~~~d~lviAtG--~~p~~~~i~G~~~~-- 125 (431)
T 1q1r_A 64 LRTPDAYAAQNIQL--LGGTQVTAINRDR--Q--QVILSDG--------RALDYDRLVLATG--GRPRPLPVASGAVG-- 125 (431)
T ss_dssp SSCHHHHHHTTEEE--ECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCGGGTTHHH--
T ss_pred ccCHHHHHhCCCEE--EeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEcCC--CCccCCCCCCcccC--
Confidence 01122334566655 8889999998643 3 4777654 5799999999999 78888888886532
Q ss_pred CCCCCc-c-eeeccCCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeeh-hhhHHHHHHhh
Q 016069 165 SATGTG-E-VIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLR 236 (396)
Q Consensus 165 ~~~~~~-~-~~~~~~~~~-----~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~ 236 (396)
+ . +++.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++. .+..+..
T Consensus 126 -----~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~~---- 195 (431)
T 1q1r_A 126 -----KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVTAPPVSA---- 195 (431)
T ss_dssp -----HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSCHHHHH----
T ss_pred -----CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchhhHHHHH----
Confidence 1 0 222111110 011237899999999999999999999999999999887 33332 1111111
Q ss_pred cCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC---C---
Q 016069 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG---N--- 308 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~---~--- 308 (396)
.+.+.+++.+|+++.+ +++++. +
T Consensus 196 -------------------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v 226 (431)
T 1q1r_A 196 -------------------------------------------------FYEHLHREAGVDIRTGTQVCGFEMSTDQQKV 226 (431)
T ss_dssp -------------------------------------------------HHHHHHHHHTCEEECSCCEEEEEECTTTCCE
T ss_pred -------------------------------------------------HHHHHHHhCCeEEEeCCEEEEEEeccCCCcE
Confidence 1234566678888887 888864 2
Q ss_pred -eEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccccc------------
Q 016069 309 -EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL------------ 375 (396)
Q Consensus 309 -~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------------ 375 (396)
.+.++||+++++|.||+|+|++|++. +++ ..+...+ +| +.+| ..+.|+.|+|||+|||+...
T Consensus 227 ~~v~~~~G~~i~~D~Vv~a~G~~p~~~-l~~-~~gl~~~-~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~ 301 (431)
T 1q1r_A 227 TAVLCEDGTRLPADLVIAGIGLIPNCE-LAS-AAGLQVD-NG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIES 301 (431)
T ss_dssp EEEEETTSCEEECSEEEECCCEEECCH-HHH-HTTCCBS-SS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCS
T ss_pred EEEEeCCCCEEEcCEEEECCCCCcCcc-hhh-ccCCCCC-CC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCH
Confidence 47788999999999999999999985 444 2122233 56 6666 45678899999999997652
Q ss_pred -cCchHHHHHHHHHHhhhc
Q 016069 376 -YGAAADAQNIADHINSIL 393 (396)
Q Consensus 376 -~~a~~~a~~~a~~i~~~l 393 (396)
..|..||+.+|.+|.+..
T Consensus 302 ~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 302 VPNALEQARKIAAILCGKV 320 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 258899999999998643
No 75
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.97 E-value=4.1e-30 Score=248.47 Aligned_cols=343 Identities=17% Similarity=0.240 Sum_probs=205.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--------------CCeEEEecCCCCCcccccCC-cCceeecccc--ccccCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--------------IPYVILERENCYASIWKKYS-YDRLRLHLAK--QFCQLPHLP 69 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--------------~~v~lie~~~~~gg~~~~~~-~~~~~~~~~~--~~~~~~~~~ 69 (396)
.+||||||+||+||++|..|.+.+ ...+.+|+.+.++ |..++ +++..++++. .+.++.+..
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 479999999999999999998753 3567788877666 76554 7777776542 222221111
Q ss_pred -----------------CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCC------CceEEEEeecC
Q 016069 70 -----------------FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEAT------NMWNVKASNLL 126 (396)
Q Consensus 70 -----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~------~~~~v~~~~~~ 126 (396)
+..+...|+++.++.+|+++++++++.. ++++++|+++.+.+.+ +.|+|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~--vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDV--VAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGG--EEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCc--eEcceEEEeeccccccccccccceEEEEEecCC
Confidence 1123345789999999999999987644 4999999999886532 35999999876
Q ss_pred CCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCC------CCCCCCCeEEEEcCCCCHHH
Q 016069 127 SPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGME 200 (396)
Q Consensus 127 ~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~VvG~G~~g~e 200 (396)
+ |+. .++.++.||+||| ..|.+|.. ..+ .+.++|+.++.. ...+.+|+|+|||+|.||+|
T Consensus 195 ~-g~~--~~~~ar~vVlatG--~~P~iP~~---~~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 195 T-GEI--SARRTRKVVIAIG--GTAKMPSG---LPQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp T-CCE--EEEEEEEEEECCC--CEECCCTT---SCC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred C-ceE--EEEEeCEEEECcC--CCCCCCCC---CCC------CcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 5 443 7899999999999 56666654 344 567899988753 45577999999999999999
Q ss_pred HHHHHHhh--cCceEEEEecCceeeehhhhHHHHHH--------hhcCChhhHHHHHHHHHHHHhccccc----------
Q 016069 201 IALDLANH--AAKTSLVIRSPVHVLSREMVYLGLVL--------LRYVPCGGVDTLMVMLSRLVYGDLSK---------- 260 (396)
Q Consensus 201 ~a~~l~~~--g~~v~~~~r~~~~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 260 (396)
++..|++. +.+|+++.|++. ..|.....+.+.+ +..++......+........++....
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~~-~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~ 339 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDSA-MRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDM 339 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSSS-CCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCceEEEEeCCCc-cccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHH
Confidence 99999976 678999999994 4454433222211 11122222221111111111100000
Q ss_pred --cCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccCceeEECCeEEecCCcEEeCcEEEECCCCCCCcccccc
Q 016069 261 --YGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLK 338 (396)
Q Consensus 261 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~ 338 (396)
..+..+.... +.....+..... ..........+++...+.+++++++.+.+|+++++|.||+||||+++.+.++.
T Consensus 340 y~~~~~~~~~~~-~~~~l~~~~~v~--~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~ 416 (501)
T 4b63_A 340 YLQRVKNPDETQ-WQHRILPERKIT--RVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLL 416 (501)
T ss_dssp HHHHHHCSCGGG-CSSEEECSEEEE--EEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHT
T ss_pred HhhccCCCcccc-cceeecCCccee--eeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhc
Confidence 0000000000 000000000000 00011122344544445566777899999999999999999999999866543
Q ss_pred cCC-CCCCCCCCCcCCCCCCCc-------cCCCceEEEecc
Q 016069 339 QGD-DSMLNDDGIPKQSYPNHW-------KGKNGLYCVGLS 371 (396)
Q Consensus 339 ~~~-~~~~~~~g~~~~~~~~~~-------~~~~~vya~Gd~ 371 (396)
... ....+.+|.+.++.++.. ...++||+.|-+
T Consensus 417 ~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 417 SKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp GGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred chhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 011 223456666666543321 235789999865
No 76
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=2.4e-31 Score=256.51 Aligned_cols=289 Identities=17% Similarity=0.243 Sum_probs=196.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
.+||+|||||++|+++|..|++. |.+|+|||+.+..+..... .+..+ .. . .....++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~---------~~~~~---~~-~-------~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG---------LPYVI---SG-A-------IASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG---------HHHHH---TT-S-------SSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC---------cchhh---cC-C-------cCCHHHhh
Confidence 36999999999999999999996 8899999998765421100 00000 00 0 00111111
Q ss_pred H-HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEE-eecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016069 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (396)
Q Consensus 85 ~-~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~ 162 (396)
. +...+.+.+++++ +.++.|+.++.++ +.+.+.. .++ +. .++.||+||+||| +.|..|+++|.+..
T Consensus 96 ~~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~ 163 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDA--KVRHEVTKVDTEK--KIVYAEHTKTK----DV--FEFSYDRLLIATG--VRPVMPEWEGRDLQ 163 (480)
T ss_dssp SSCHHHHHHTTCCEE--ESSEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCCCBTTTSB
T ss_pred hcCHHHHHhhcCCEE--EeCCEEEEEECCC--CEEEEEEcCCC----ce--EEEEcCEEEECCC--CcccCCCCCCccCC
Confidence 1 1223334457665 8889999998754 5554443 122 11 3799999999999 78888888887532
Q ss_pred ccCCCCCcceeeccCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHh
Q 016069 163 CSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLL 235 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~ 235 (396)
..++.....+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+.++..
T Consensus 164 --------~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~--- 231 (480)
T 3cgb_A 164 --------GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDGDMAE--- 231 (480)
T ss_dssp --------TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCHHHHH---
T ss_pred --------CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCHHHHH---
Confidence 23332221111 01148999999999999999999999999999999887 343322222211
Q ss_pred hcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCe-E--
Q 016069 236 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-V-- 310 (396)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~-v-- 310 (396)
.+.+.+++.+|+++.+ +++++.++ +
T Consensus 232 --------------------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~ 261 (480)
T 3cgb_A 232 --------------------------------------------------YIYKEADKHHIEILTNENVKAFKGNERVEA 261 (480)
T ss_dssp --------------------------------------------------HHHHHHHHTTCEEECSCCEEEEEESSBEEE
T ss_pred --------------------------------------------------HHHHHHHHcCcEEEcCCEEEEEEcCCcEEE
Confidence 1235566778999877 77876543 2
Q ss_pred EecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc-------------ccC
Q 016069 311 IFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYG 377 (396)
Q Consensus 311 ~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~ 377 (396)
+..++.++++|.||+|+|++|++. +++ ..+..++++|.+.+|. .+.|+.|+|||+|||+.. ...
T Consensus 262 v~~~~~~i~~D~vi~a~G~~p~~~-~l~-~~g~~~~~~G~I~Vd~-~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~ 338 (480)
T 3cgb_A 262 VETDKGTYKADLVLVSVGVKPNTD-FLE-GTNIRTNHKGAIEVNA-YMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTT 338 (480)
T ss_dssp EEETTEEEECSEEEECSCEEESCG-GGT-TSCCCBCTTSCBCCCT-TSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHH
T ss_pred EEECCCEEEcCEEEECcCCCcChH-HHH-hCCcccCCCCCEEECC-CccCCCCCEEEeeeEEEecCCCCCcceecchHHH
Confidence 334566899999999999999985 455 3234567788888884 566889999999999742 237
Q ss_pred chHHHHHHHHHHhhh
Q 016069 378 AAADAQNIADHINSI 392 (396)
Q Consensus 378 a~~~a~~~a~~i~~~ 392 (396)
|..||+.+|++|.+.
T Consensus 339 A~~qg~~aa~~i~g~ 353 (480)
T 3cgb_A 339 ANKQGRLAGLNMLDK 353 (480)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999864
No 77
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=3.1e-31 Score=248.76 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=196.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
++||+|||||++|+++|..|++.| .+|+++|+.. |..|..... .. .........++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l-----------~~--------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPML-----------ST--------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGG-----------GG--------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccc-----------cH--------HHhCCCCHHHhh
Confidence 589999999999999999999988 4689999875 222221100 00 001112233333
Q ss_pred H-HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016069 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (396)
Q Consensus 85 ~-~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~ 163 (396)
. ++...+++.+++. +.++.|+.++... +.|.+.+ ..+.||+||+||| +.|..|+++|.+..
T Consensus 63 ~~~~~~~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~---------~~~~~d~lviAtG--~~p~~p~i~g~~~~- 124 (384)
T 2v3a_A 63 MAEPGAMAEQLNARI--LTHTRVTGIDPGH----QRIWIGE---------EEVRYRDLVLAWG--AEPIRVPVEGDAQD- 124 (384)
T ss_dssp EECHHHHHHHTTCEE--ECSCCCCEEEGGG----TEEEETT---------EEEECSEEEECCC--EEECCCCCBSTTTT-
T ss_pred ccCHHHHHHhCCcEE--EeCCEEEEEECCC----CEEEECC---------cEEECCEEEEeCC--CCcCCCCCCCcCcC-
Confidence 2 4455566677765 7788898887643 3466643 5799999999999 78888888876521
Q ss_pred cCCCCCcceeeccCCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh-hhHHHHHHhhc
Q 016069 164 SSATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLRY 237 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-----~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~~ 237 (396)
..++...+.+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .+++.. +..+..
T Consensus 125 -------~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~~~~~----- 191 (384)
T 2v3a_A 125 -------ALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLLHPAAAK----- 191 (384)
T ss_dssp -------CEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHHHH-----
T ss_pred -------CEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhcccCHHHHH-----
Confidence 234443332111 1237999999999999999999999999999999988 444432 221111
Q ss_pred CChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC----eEE
Q 016069 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVI 311 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~----~v~ 311 (396)
.+.+.+++.+|+++.+ +.+++.+ .+.
T Consensus 192 ------------------------------------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 223 (384)
T 2v3a_A 192 ------------------------------------------------AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAH 223 (384)
T ss_dssp ------------------------------------------------HHHHHHHTTTCEEEESCCEEEEEEETTEEEEE
T ss_pred ------------------------------------------------HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEE
Confidence 1245567788998877 7777643 477
Q ss_pred ecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEecccc--c-----ccCchHHHHH
Q 016069 312 FENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK--G-----LYGAAADAQN 384 (396)
Q Consensus 312 ~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~--~-----~~~a~~~a~~ 384 (396)
+++|+++++|.||+|+|+.|++. +++ ..+...+ +| +.+|. .+.|+.|+|||+|||+. + ...|..||+.
T Consensus 224 ~~~g~~i~~d~vv~a~G~~p~~~-l~~-~~g~~~~-~g-i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~ 298 (384)
T 2v3a_A 224 LSDGEVIPCDLVVSAVGLRPRTE-LAF-AAGLAVN-RG-IVVDR-SLRTSHANIYALGDCAEVDGLNLLYVMPLMACARA 298 (384)
T ss_dssp ETTSCEEEESEEEECSCEEECCH-HHH-HTTCCBS-SS-EEECT-TCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHH
T ss_pred ECCCCEEECCEEEECcCCCcCHH-HHH-HCCCCCC-CC-EEECC-CCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHH
Confidence 78999999999999999999985 444 3233344 57 77774 46689999999999974 2 2246899999
Q ss_pred HHHHHhhh
Q 016069 385 IADHINSI 392 (396)
Q Consensus 385 ~a~~i~~~ 392 (396)
+|++|.+.
T Consensus 299 ~a~~i~g~ 306 (384)
T 2v3a_A 299 LAQTLAGN 306 (384)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999863
No 78
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.5e-30 Score=249.42 Aligned_cols=295 Identities=18% Similarity=0.222 Sum_probs=196.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc-CCcCceeeccc----cccccCCC---CCCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPH---LPFPSSYPMFV 78 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~-~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~ 78 (396)
++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|.. .+.|...+... ..+..+.. +..+.. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCcc
Confidence 58999999999999999999999999999999 678887752 22221110000 00000111 111101 1112
Q ss_pred CHHHHHHH-----------HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016069 79 SRAQFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (396)
Q Consensus 79 ~~~~~~~~-----------l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~ 147 (396)
+...+..+ +....++.+++. +.++.+. ++ + . +|.+.+ ..+.||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~~--~--~--~v~v~~---------~~~~~d~lviATG- 143 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-LD--G--K--QVEVDG---------QRIQCEHLLLATG- 143 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-EE--T--T--EEEETT---------EEEECSEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-cc--C--C--EEEEee---------EEEEeCEEEEeCC-
Confidence 33333332 234455667664 6665443 32 1 2 355543 5689999999999
Q ss_pred CCCCCCCC-CCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh
Q 016069 148 TSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (396)
Q Consensus 148 ~s~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (396)
++|..|+ ++ .+ +..++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++++ .++|..
T Consensus 144 -s~p~~~~~~~-~~---------~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 210 (458)
T 1lvl_A 144 -SSSVELPMLP-LG---------GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTY 210 (458)
T ss_dssp -EEECCBTTBC-CB---------TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTS
T ss_pred -CCCCCCCCCC-cc---------CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-cccccc
Confidence 6776665 33 11 13455554444333 37999999999999999999999999999999998 455544
Q ss_pred hhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--cee
Q 016069 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (396)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~ 304 (396)
+.++... +.+.+++.+|+++.+ +++
T Consensus 211 ~~~~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 211 DSELTAP-----------------------------------------------------VAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp CHHHHHH-----------------------------------------------------HHHHHHHHTCEEETTCEEEE
T ss_pred CHHHHHH-----------------------------------------------------HHHHHHHCCCEEEECCEEEE
Confidence 3333222 234556678999887 888
Q ss_pred EECCeEEec--CC--cEEeCcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc---
Q 016069 305 IRGNEVIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY--- 376 (396)
Q Consensus 305 ~~~~~v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~--- 376 (396)
++.+.+.+. +| +++++|.||+|+|++|++..+ ++ ..+..++++ .+.+|. .+.|+.|+|||+|||+..+.
T Consensus 238 i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~-~~g~~~~~~-~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~ 314 (458)
T 1lvl_A 238 YENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLE-CLDLKMNGA-AIAIDE-RCQTSMHNVWAIGDVAGEPMLAH 314 (458)
T ss_dssp EETTEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGG-GSCCCEETT-EECCCT-TCBCSSTTEEECGGGGCSSCCHH
T ss_pred EEeCCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcH-hcCCcccCC-EEeECC-CCcCCCCCEEEeeccCCCcccHH
Confidence 876445454 56 689999999999999999654 34 323334555 777774 45688999999999987643
Q ss_pred CchHHHHHHHHHHhh
Q 016069 377 GAAADAQNIADHINS 391 (396)
Q Consensus 377 ~a~~~a~~~a~~i~~ 391 (396)
.|..||+.+|.+|.+
T Consensus 315 ~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 315 RAMAQGEMVAEIIAG 329 (458)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 789999999999986
No 79
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=2.5e-30 Score=256.20 Aligned_cols=303 Identities=15% Similarity=0.190 Sum_probs=192.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC-C-------CCCcccc-cCCcCceeecccc-------ccccCCCCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-N-------CYASIWK-KYSYDRLRLHLAK-------QFCQLPHLP 69 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~-~-------~~gg~~~-~~~~~~~~~~~~~-------~~~~~~~~~ 69 (396)
..+||+|||||+||+++|..|++.|.+|+|||+. + .+||+|. ..++|...+.... ....+ ...
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~-g~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF-GWS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC-Ccc
Confidence 3689999999999999999999999999999973 2 3566543 2222221111000 00000 111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHH-----------hcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEe
Q 016069 70 FPSSYPMFVSRAQFIEYLDHYVS-----------HFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSG 138 (396)
Q Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~ 138 (396)
.+.. ....+..++.+++..+++ ..++. ........++. ....+.+.++ +. .++.|
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~~----~~v~v~~~~g----~~--~~~~~ 250 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLISP----HEVQITDKNQ----KV--STITG 250 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC----CE--EEEEE
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcCC----CEEEEEeCCC----Ce--EEEEe
Confidence 1100 012345566666544433 22333 22223333331 2222333222 21 46899
Q ss_pred CEEEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEec
Q 016069 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (396)
Q Consensus 139 d~vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~ 218 (396)
|+||+||| +.|+.|+++|.+.+ .++..+..... ..+++++|||+|.+|+|+|..|++.|.+||+++|+
T Consensus 251 d~lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 251 NKIILATG--ERPKYPEIPGAVEY---------GITSDDLFSLP-YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp EEEEECCC--EEECCCSSTTHHHH---------CEEHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEeCC--CCCCCCCCCCcccc---------eEcHHHHhhCc-cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 99999999 78999999987654 23333332222 34789999999999999999999999999999987
Q ss_pred CceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEE
Q 016069 219 PVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQV 298 (396)
Q Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 298 (396)
..+|..+.++...+ .+.+++.+|++
T Consensus 319 --~~l~~~d~~~~~~~-----------------------------------------------------~~~l~~~gv~i 343 (598)
T 2x8g_A 319 --ILLRGFDQQMAEKV-----------------------------------------------------GDYMENHGVKF 343 (598)
T ss_dssp --CSSTTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEE
T ss_pred --cCcCcCCHHHHHHH-----------------------------------------------------HHHHHhCCCEE
Confidence 34444443333322 24455668888
Q ss_pred ccC--ceeEE--------C---CeEE----ecCCcEEe--CcEEEECCCCCCCcccc-cccCCCCCCCCCCCcCCCCCCC
Q 016069 299 LPG--IESIR--------G---NEVI----FENGHSHH--FDSIVFCTGFKRSTNVW-LKQGDDSMLNDDGIPKQSYPNH 358 (396)
Q Consensus 299 ~~~--v~~~~--------~---~~v~----~~~g~~~~--~D~vi~atG~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 358 (396)
+.+ +.+++ . +.+. +.+|++++ +|.||+|+|++||+..+ ++ ..+..++++|++.+|.. +
T Consensus 344 ~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~-~~gl~~~~~G~i~vd~~-~ 421 (598)
T 2x8g_A 344 AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCE-TVGVKLDKNGRVVCTDD-E 421 (598)
T ss_dssp EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCG-GGCCCBCTTSCBCCCTT-S
T ss_pred EECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCch-hcCceECCCCcEEeCCC-C
Confidence 776 45552 1 2232 35777665 99999999999999554 23 32344677899988844 5
Q ss_pred ccCCCceEEEeccccc----ccCchHHHHHHHHHHhhh
Q 016069 359 WKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSI 392 (396)
Q Consensus 359 ~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~~~ 392 (396)
.|+.|+|||+|||+.+ ...|..+|+.+|.+|.+.
T Consensus 422 ~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 422 QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp BCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 6899999999999543 337899999999999864
No 80
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=9.3e-31 Score=247.76 Aligned_cols=284 Identities=16% Similarity=0.159 Sum_probs=195.9
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
++|+|||||++|+++|..|++ .|.+|+|||+++..+.... +.. .........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-----------------~~~-----~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-----------------LPH-----VAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-----------------SCC-----CCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-----------------hhh-----cccCCcCHHHHH
Confidence 489999999999999999999 8999999999874321100 000 001111222233
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
..+.+.+++.+++. +.+ +|++++.+. .. |++.++.. .. .++.||+||+|+| +.|+.|.++|.+..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~--~~--V~~~~g~~--~~--~~~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS--SM--VYYTKPDG--SM--AEEEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT--TE--EEEECTTS--CE--EEEECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC--CE--EEEccCCc--cc--ceeeCCEEEECCC--CCcCccCCCChhhc--
Confidence 44555556667764 554 899998654 33 66665432 21 5699999999999 68888888887643
Q ss_pred CCCCCcceeeccCCCCCCCCC------CCeEEEEcCC-------------------C------CHHHHHHHHH----hhc
Q 016069 165 SATGTGEVIHSTQYKNGKPYG------GKNVLVVGSG-------------------N------SGMEIALDLA----NHA 209 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~------~~~i~VvG~G-------------------~------~g~e~a~~l~----~~g 209 (396)
..+.+.+.+..... .++++|||+| . .++|++..++ +.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 23333322211111 2667899999 2 3778885544 556
Q ss_pred ----CceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCc
Q 016069 210 ----AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDA 285 (396)
Q Consensus 210 ----~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (396)
.+|+++.+.+ .+|..+......
T Consensus 198 ~~~~~~v~~~~~~~--~l~~~~~~~~~~---------------------------------------------------- 223 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE--YLSDLSPNSRKA---------------------------------------------------- 223 (409)
T ss_dssp CTTTEEEEEECSSS--SSTTBCHHHHHH----------------------------------------------------
T ss_pred CCCCeEEEEEeCCc--cccccCHHHHHH----------------------------------------------------
Confidence 3799998876 333332222221
Q ss_pred hhhhhhcCCCeEEccC--ceeEECCeEEecCCcEEeCcEEEECCCCCCCcccccccCC-CCCCCCCCCcCCCCCCCccCC
Q 016069 286 GTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGD-DSMLNDDGIPKQSYPNHWKGK 362 (396)
Q Consensus 286 ~~~~~~~~~~i~v~~~--v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 362 (396)
+.+.+++.+|+++.+ |++++.+++.++||+++++|.||+|+|+.|+. ++. .. ..+.+++|++.+|...+.++.
T Consensus 224 -~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~--~l~-~~~~~l~~~~G~i~vd~~~~~~~~ 299 (409)
T 3h8l_A 224 -VASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNP--ALK-NSTPDLVDDGGFIPTDLNMVSIKY 299 (409)
T ss_dssp -HHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCH--HHH-TSCGGGSCTTSCBCBBTTSBBSSC
T ss_pred -HHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccH--HHH-hccccCcCCCCCEEeCcccccCCC
Confidence 245567789999987 99999999999999999999999999999985 444 31 245678899988865444589
Q ss_pred CceEEEeccccc-----ccCchHHHHHHHHHHhhhc
Q 016069 363 NGLYCVGLSRKG-----LYGAAADAQNIADHINSIL 393 (396)
Q Consensus 363 ~~vya~Gd~~~~-----~~~a~~~a~~~a~~i~~~l 393 (396)
||||++|||+.. ...|..||+.+|++|.+.+
T Consensus 300 ~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 300 DNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999863 2378999999999999887
No 81
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=2.1e-30 Score=247.21 Aligned_cols=289 Identities=13% Similarity=0.162 Sum_probs=198.6
Q ss_pred CCeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
++||+|||||++|+++|..|++ .+.+|+|||+.+.... .+. +.. .........++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------------~~~-~~~--------~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------------VPS-NPW--------VGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------------GGG-HHH--------HHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------------cCC-ccc--------cccCccCHHHH
Confidence 4699999999999999999999 7999999999873210 000 000 00112344555
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~ 163 (396)
...+...+++.+++. ...+|+.++.+. . .|++.++ .++.||+||+||| +.|+.|.++|.+..
T Consensus 62 ~~~l~~~~~~~gv~~---~~~~v~~id~~~--~--~V~~~~g--------~~i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIHF---IAQSAEQIDAEA--Q--NITLADG--------NTVHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCEE---ECSCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCEE---EEeEEEEEEcCC--C--EEEECCC--------CEEECCEEEECCC--CCcCcccCCCCCcc-
Confidence 555667777778774 467899998754 3 4777765 5799999999999 78888888888753
Q ss_pred cCCCCCcceeeccCCCCCCC--------CCCCeEEEEcCCCC----H--HHHHHHH----HhhcCc-----eEEEEecCc
Q 016069 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNS----G--MEIALDL----ANHAAK-----TSLVIRSPV 220 (396)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~--------~~~~~i~VvG~G~~----g--~e~a~~l----~~~g~~-----v~~~~r~~~ 220 (396)
.+..++.+...+... ..+++++|||+|.+ | +|+|..+ .+.|.+ |+++++.+.
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~ 198 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPY 198 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSS
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcc
Confidence 233333332221111 11456789998554 4 8888444 455653 999998872
Q ss_pred eeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEcc
Q 016069 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (396)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~ 300 (396)
+.+.... ..+.....+.+.+++.+|+++.
T Consensus 199 -~~~~~l~--------------------------------------------------~~~~~~~~~~~~l~~~gI~~~~ 227 (437)
T 3sx6_A 199 -IGHLGIQ--------------------------------------------------GVGDSKGILTKGLKEEGIEAYT 227 (437)
T ss_dssp -TTCTTTT--------------------------------------------------CCTTHHHHHHHHHHHTTCEEEC
T ss_pred -ccccccC--------------------------------------------------cchHHHHHHHHHHHHCCCEEEc
Confidence 2110000 0011112234667788999998
Q ss_pred C--ceeEECCeEEecC---------CcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEe
Q 016069 301 G--IESIRGNEVIFEN---------GHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVG 369 (396)
Q Consensus 301 ~--v~~~~~~~v~~~~---------g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~G 369 (396)
+ +++++++++.+++ ++++++|.+++|+|+.++.. +.. . ..+.+++|++.+|...+.++.|+|||+|
T Consensus 228 ~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~-~~~-~-~gl~~~~G~i~Vd~~l~t~~~~~Ifa~G 304 (437)
T 3sx6_A 228 NCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPA-VAG-V-EGLCNPGGFVLVDEHQRSKKYANIFAAG 304 (437)
T ss_dssp SEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHH-HHT-S-TTTBCTTSCBCBCTTSBBSSCTTEEECG
T ss_pred CCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchh-hhc-c-ccccCCCCcEEeChhccCCCCCCEEEEE
Confidence 8 9999999887765 67899999999999998762 322 2 3457889999999655555899999999
Q ss_pred cccccc---------------cCchHHHHHHHHHHhhhcC
Q 016069 370 LSRKGL---------------YGAAADAQNIADHINSILS 394 (396)
Q Consensus 370 d~~~~~---------------~~a~~~a~~~a~~i~~~l~ 394 (396)
||+... ..|..||+.+|+||.+.+.
T Consensus 305 D~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 305 IAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp GGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 997632 2789999999999998875
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=4.9e-29 Score=237.83 Aligned_cols=296 Identities=16% Similarity=0.123 Sum_probs=187.3
Q ss_pred CCeEEEECCChHHHHHHHHHHh-c------CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (396)
++||+|||||++|+++|..|++ + +.+|+|||+.+..+|.|+.... +.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 5799999999999999999999 7 8999999999888888763311 11233
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCc
Q 016069 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGL 159 (396)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~ 159 (396)
..++..++.+.+++.+++. +.+..+ . .. |++.+ ..+.||+||+|||. ..++.+.+||.
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v------~--~~--v~~~~---------~~~~~d~lViAtG~-~~~~~~~ipG~ 117 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV------G--EH--VQPGE---------LSERYDAVIYAVGA-QSDRMLNIPGE 117 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB------T--TT--BCHHH---------HHHHSSEEEECCCC-CEECCCCCTTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE------C--CE--EEECC---------CeEeCCEEEEeeCC-CCCCCCCCCCC
Confidence 4456677777776666554 555332 1 22 44333 34789999999994 13677778887
Q ss_pred cccccCCCCCcceeeccCC-----------CCCCCCCCCeEEEEcCCCCHHHHHHHHHhh--------------------
Q 016069 160 SSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH-------------------- 208 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~-------------------- 208 (396)
+ + .+ +++..++ .+...+.+++++|||+|.+|+|+|..|+..
T Consensus 118 ~-~------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~ 189 (456)
T 1lqt_A 118 D-L------PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPR 189 (456)
T ss_dssp T-S------TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTC
T ss_pred C-C------CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHC
Confidence 5 2 22 3333221 222234689999999999999999999974
Q ss_pred c-CceEEEEecCceeeehhhhHHHHHHhhcCC--------hhh-------HHHHHHHHHHHHhccccccCcCCCCCCcch
Q 016069 209 A-AKTSLVIRSPVHVLSREMVYLGLVLLRYVP--------CGG-------VDTLMVMLSRLVYGDLSKYGIHKPREGPFF 272 (396)
Q Consensus 209 g-~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (396)
+ .+|+++.|++. ..+.+.......+. .+| ..+ ...+.. .....
T Consensus 190 g~~~V~lv~r~~~-~~~~f~~~elrel~-~lp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------ 248 (456)
T 1lqt_A 190 GIQEVVIVGRRGP-LQAAFTTLELRELA-DLDGVDVVIDPAELDGITDEDAAAVGK-VCKQN------------------ 248 (456)
T ss_dssp CCCEEEEECSSCG-GGCCCCHHHHHHGG-GCTTEEEECCGGGGTTCCHHHHHHHCH-HHHHH------------------
T ss_pred CCcEEEEEecCCh-hhhccChHHHHHhh-cCCCceeeeChHHhccchhhhhhhccH-HHHHH------------------
Confidence 4 48999999883 32222110000000 000 000 000000 00000
Q ss_pred hhhccCCccccCchhhhhhcC------CCeEEccC--ceeEECC----eEEec----------------CC--cEEeCcE
Q 016069 273 MKAAYGKYPVIDAGTCEKIKS------GQIQVLPG--IESIRGN----EVIFE----------------NG--HSHHFDS 322 (396)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~------~~i~v~~~--v~~~~~~----~v~~~----------------~g--~~~~~D~ 322 (396)
.+.+.+.+++ .+|+++.+ +.++..+ +|.++ +| +++++|.
T Consensus 249 -----------~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~ 317 (456)
T 1lqt_A 249 -----------IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQL 317 (456)
T ss_dssp -----------HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSE
T ss_pred -----------HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCE
Confidence 0000111222 56777776 6666554 25554 34 4689999
Q ss_pred EEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccccc----CchHHHHHHHHHHhhhc
Q 016069 323 IVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY----GAAADAQNIADHINSIL 393 (396)
Q Consensus 323 vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~a~~~a~~i~~~l 393 (396)
||+|+|++|++ + . ...++++|.+.+|...+.++.|+|||+|||+.++. .|..+|..+|.+|.+.+
T Consensus 318 vi~a~G~~p~~--l-~---gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 318 VVRSVGYRGVP--T-P---GLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp EEECSCEECCC--C-T---TSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHH
T ss_pred EEEccccccCC--C-C---CCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 2 3 33456677777775555478999999999976533 58899999999998764
No 83
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=4.4e-29 Score=250.51 Aligned_cols=268 Identities=16% Similarity=0.178 Sum_probs=192.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
.++||+|||||++|+++|..|++.|++|+|||+.+..||.|.... ..+.+....++..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 358999999999999999999999999999999998988765310 0112234557777
Q ss_pred HHHHHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC------CCCCCCCC
Q 016069 86 YLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRG 158 (396)
Q Consensus 86 ~l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~------p~~~~~~g 158 (396)
++...+.++ ++++ +.++.| ...+. ..+.||+||+|||...+ |..|.++|
T Consensus 448 ~~~~~~~~~~gv~~--~~~~~v--------------~~~~~--------~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVEI--YRESPM--------------TGDDI--------VEFGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEEE--ESSCCC--------------CHHHH--------HHTTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCEE--EECCee--------------cHHHH--------hhcCCCEEEEcCCCccccccccccCCCCCCC
Confidence 887777765 5544 554432 11222 45789999999994322 55677777
Q ss_pred ccccccCCCCCcceeeccCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhh
Q 016069 159 LSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLR 236 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG--~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~ 236 (396)
.+.. ..++..++.......+++++||| +|.+|+|+|..|.+.|.+|+++++.+ ..++....
T Consensus 504 ~~~~--------~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~-------- 566 (690)
T 3k30_A 504 AEGM--------QVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNN-------- 566 (690)
T ss_dssp CTTS--------EEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGG--------
T ss_pred CCCC--------cEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccccc--------
Confidence 6532 45565555554445578999999 99999999999999999999999887 33222111
Q ss_pred cCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCeEEec-
Q 016069 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE- 313 (396)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~v~~~- 313 (396)
+.....+.+.+++.+|+++.+ +++++.+++.+.
T Consensus 567 --------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~ 602 (690)
T 3k30_A 567 --------------------------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRD 602 (690)
T ss_dssp --------------------------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEE
T ss_pred --------------------------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEE
Confidence 001112346677789999988 999998876554
Q ss_pred ----CCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc--ccCchHHHHHHHH
Q 016069 314 ----NGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIAD 387 (396)
Q Consensus 314 ----~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~--~~~a~~~a~~~a~ 387 (396)
+++++++|.||+|+|++|+... .. . ... .+. .|+.|+||++|||+.. +..|..||+.+|.
T Consensus 603 ~~~~~~~~i~aD~VV~A~G~~p~~~l-~~-~-l~~---~~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~ 668 (690)
T 3k30_A 603 TYASIERELECDAVVMVTARLPREEL-YL-D-LVA---RRD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAE 668 (690)
T ss_dssp TTTCCEEEEECSEEEEESCEEECCHH-HH-H-HHH---HHH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHH
T ss_pred ccCCeEEEEECCEEEECCCCCCChHH-HH-H-Hhh---hhc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHH
Confidence 4568899999999999999853 33 1 111 111 4678999999999865 3479999999999
Q ss_pred HHhhhcC
Q 016069 388 HINSILS 394 (396)
Q Consensus 388 ~i~~~l~ 394 (396)
+|.+.+.
T Consensus 669 ~i~~~l~ 675 (690)
T 3k30_A 669 EFDAVLP 675 (690)
T ss_dssp HTTCCCC
T ss_pred HHHhhcc
Confidence 9998865
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.95 E-value=2.9e-29 Score=242.38 Aligned_cols=303 Identities=13% Similarity=0.155 Sum_probs=185.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCccc---ccCCcCceeeccccccccCCCCCCCC------CC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIW---KKYSYDRLRLHLAKQFCQLPHLPFPS------SY 74 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 74 (396)
.++||+|||||+||+++|..|++. +.+|+|||+.+..+-.. ....+........ ....+..++... ..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVT-KTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHH-HHCEEECTTSCEEESBSSCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchh-hcccccccccccccccccch
Confidence 358999999999999999999887 78999999987654100 0000000000000 000000000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 75 PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
..+....++.+ ..+.++ .++.++.|++++... ++|.+.++ .++.||+||+||| ++|+.|
T Consensus 89 ~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~----~~V~~~~g--------~~i~yd~lviATG--s~p~~~ 147 (493)
T 1m6i_A 89 SFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD----NMVKLNDG--------SQITYEKCLIATG--GTPRSL 147 (493)
T ss_dssp GGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG----TEEEETTS--------CEEEEEEEEECCC--EEECCC
T ss_pred Hhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCCC
Confidence 00111111100 112343 348888999998754 34777665 6799999999999 677766
Q ss_pred CCCCcc--ccccCCCCCcceeeccCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHHhh----cCceEEEEecCceee
Q 016069 155 DIRGLS--SFCSSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANH----AAKTSLVIRSPVHVL 223 (396)
Q Consensus 155 ~~~g~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~VvG~G~~g~e~a~~l~~~----g~~v~~~~r~~~~~~ 223 (396)
++++.. .+ ...........+. ....+++++|||+|.+|+|+|..|.+. |.+|+++.+.+. .+
T Consensus 148 ~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~-~~ 220 (493)
T 1m6i_A 148 SAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG-NM 220 (493)
T ss_dssp HHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS-TT
T ss_pred CCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc-cc
Confidence 544321 11 0112221111110 011378999999999999999999874 678999987752 11
Q ss_pred ehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--
Q 016069 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (396)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-- 301 (396)
++. ++.. ....+.+.+++.+|+++.+
T Consensus 221 ~~~-----------l~~~-----------------------------------------~~~~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 221 GKI-----------LPEY-----------------------------------------LSNWTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp TTT-----------SCHH-----------------------------------------HHHHHHHHHHTTTCEEECSCC
T ss_pred ccc-----------CCHH-----------------------------------------HHHHHHHHHHhcCCEEEeCCE
Confidence 111 1100 1111245677789999987
Q ss_pred ceeEECC----eEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCC-CCCcCCCCCCCccCCCceEEEecccccc-
Q 016069 302 IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLND-DGIPKQSYPNHWKGKNGLYCVGLSRKGL- 375 (396)
Q Consensus 302 v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~vya~Gd~~~~~- 375 (396)
|++++.+ .+.+++|+++++|.||+|+|++||+. +++ ..+..+++ +|.+.+|.. +.+ .|+|||+|||+...
T Consensus 249 V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~-l~~-~~gl~~~~~~ggi~Vd~~-l~t-~~~IyA~GD~a~~~~ 324 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVE-LAK-TGGLEIDSDFGGFRVNAE-LQA-RSNIWVAGDAACFYD 324 (493)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCT-THH-HHTCCBCTTTCSEECCTT-CEE-ETTEEECGGGEEEEE
T ss_pred EEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHH-HHH-HcCCccccCCCcEEECCC-ccc-CCCeeEeeeeEeccC
Confidence 8888532 37788999999999999999999985 444 21233443 567777744 345 69999999997631
Q ss_pred -----------cCchHHHHHHHHHHhhhc
Q 016069 376 -----------YGAAADAQNIADHINSIL 393 (396)
Q Consensus 376 -----------~~a~~~a~~~a~~i~~~l 393 (396)
..|..||+.+|.+|.+..
T Consensus 325 ~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 325 IKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp TTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred cccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 168999999999998654
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=1.9e-28 Score=233.94 Aligned_cols=303 Identities=15% Similarity=0.113 Sum_probs=185.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
..++|+|||||++|+++|..|++.+ .+|+|||+.+..+|.|+.... +.+....++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 3689999999999999999999988 899999999888888764321 112223456
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC-CCCCCCCcccc
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP-FTPDIRGLSSF 162 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p-~~~~~~g~~~~ 162 (396)
..++...+++.+++. +.++.|. .. |++.+ ..+.||+||+||| +.+ +.|++||.+.
T Consensus 62 ~~~~~~~~~~~gv~~--~~~~~v~--------~~--V~~~~---------~~~~~d~lVlAtG--s~~~~~~~ipG~~~- 117 (460)
T 1cjc_A 62 INTFTQTARSDRCAF--YGNVEVG--------RD--VTVQE---------LQDAYHAVVLSYG--AEDHQALDIPGEEL- 117 (460)
T ss_dssp HHHHHHHHTSTTEEE--EBSCCBT--------TT--BCHHH---------HHHHSSEEEECCC--CCEECCCCCTTTTS-
T ss_pred HHHHHHHHHhCCcEE--EeeeEEe--------eE--EEecc---------ceEEcCEEEEecC--cCCCCCCCCCCCCC-
Confidence 677777777766554 6665541 11 33332 3368999999999 554 6778888753
Q ss_pred ccCCCCCcceeeccCC----------CCCC-CCCCCeEEEEcCCCCHHHHHHHHH--------------------hhcC-
Q 016069 163 CSSATGTGEVIHSTQY----------KNGK-PYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA- 210 (396)
Q Consensus 163 ~~~~~~~~~~~~~~~~----------~~~~-~~~~~~i~VvG~G~~g~e~a~~l~--------------------~~g~- 210 (396)
.+ +++...+ .... .+.+++++|||+|.+|+|+|..|+ +.+.
T Consensus 118 ------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~ 190 (460)
T 1cjc_A 118 ------PG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVK 190 (460)
T ss_dssp ------TT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCC
T ss_pred ------Cc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCc
Confidence 22 3333222 1111 235899999999999999999999 4566
Q ss_pred ceEEEEecCceeeehhhhHHHHHH--------------------hhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCc
Q 016069 211 KTSLVIRSPVHVLSREMVYLGLVL--------------------LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGP 270 (396)
Q Consensus 211 ~v~~~~r~~~~~~p~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (396)
+|+++.|++....+....++.... ...++. ...+....+.........+++..
T Consensus 191 ~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~------ 263 (460)
T 1cjc_A 191 TVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAA------ 263 (460)
T ss_dssp EEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHH------
T ss_pred EEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhcccccccc------
Confidence 799999998432211111111100 000000 00000000000000000000000
Q ss_pred chhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-------eEEec---------------CC--cEEeCcEEE
Q 016069 271 FFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-------EVIFE---------------NG--HSHHFDSIV 324 (396)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-------~v~~~---------------~g--~~~~~D~vi 324 (396)
.......+|+++.+ +.++..+ +|.+. +| +++++|.||
T Consensus 264 -----------------~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi 326 (460)
T 1cjc_A 264 -----------------RRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVL 326 (460)
T ss_dssp -----------------HHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEE
T ss_pred -----------------CCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEE
Confidence 00011256777766 6666432 24443 34 578999999
Q ss_pred ECCCCCCCcccccccCCCC-CCCCCCCcCCCCCCCccC-CCceEEEeccccccc----CchHHHHHHHHHHhhhc
Q 016069 325 FCTGFKRSTNVWLKQGDDS-MLNDDGIPKQSYPNHWKG-KNGLYCVGLSRKGLY----GAAADAQNIADHINSIL 393 (396)
Q Consensus 325 ~atG~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~-~~~vya~Gd~~~~~~----~a~~~a~~~a~~i~~~l 393 (396)
+|+|++|++ + . +. .++++|.+++|.. ..++ .|+|||+|||+.++. .|..+|..+|.+|.+.+
T Consensus 327 ~a~G~~p~~--l-~---gl~~~d~~g~i~vn~~-~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 327 SSIGYKSRP--I-D---PSVPFDPKLGVVPNME-GRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp ECCCEECCC--C-C---TTSCCBTTTTBCCEET-TEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCC--C-C---CCcccccCCCeeECCC-CcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999987 2 3 33 4566677777633 4555 799999999986533 68899999999998765
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=4.8e-27 Score=242.76 Aligned_cols=282 Identities=15% Similarity=0.164 Sum_probs=189.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||+||+++|..|++.|++|+|||+.+..||.|. .. +...+ .. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~~-~k~~i------------------~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-DT-AGEQI------------------DG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-GS-SCCEE------------------TT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-cC-Ccccc------------------CC-CCHHHHHHH
Confidence 47999999999999999999999999999999988888776 21 10000 00 112344444
Q ss_pred HHHHHHhc-CCcceeeeceEEEEEEEcCC-------CCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCC
Q 016069 87 LDHYVSHF-NIVPSIRYQRSVESASYDEA-------TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRG 158 (396)
Q Consensus 87 l~~~~~~~-~~~~~~~~~~~v~~i~~~~~-------~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g 158 (396)
+.+...++ +++. +.+++|.+++.... .+.+.+.+.+....+.. ..+.||+||+||| +.|+.|+++|
T Consensus 187 ~~~~l~~~~~v~~--~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~--~~i~~d~lVlATG--s~p~~~~ipG 260 (965)
T 2gag_A 187 VTSELAEAEETTH--LQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERI--WHIRAKQVVLATG--AHERPIVFEN 260 (965)
T ss_dssp HHHHHHHSTTEEE--ESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEE--EEEEEEEEEECCC--EEECCCCCBT
T ss_pred HHHHHhhcCCcEE--EeCCEEEeeecCCceeeeEeecccccccccccCCCCce--EEEECCEEEECCC--CccCCCCCCC
Confidence 44444443 5554 88888988864210 00111111000000011 4789999999999 6788888888
Q ss_pred ccccccCCCCCcceeeccC---CCC-CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHH
Q 016069 159 LSSFCSSATGTGEVIHSTQ---YKN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (396)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (396)
.+.. .+++... +.. .....+++++|||+|.+|+|+|..|.+.|.+|+++++++. .++.
T Consensus 261 ~~~~--------gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~-~~~~--------- 322 (965)
T 2gag_A 261 NDRP--------GIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSS-ISAA--------- 322 (965)
T ss_dssp CCST--------TEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS-CCHH---------
T ss_pred CCCC--------CEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc-cchh---------
Confidence 7642 2333211 111 1233468999999999999999999999999999999883 2110
Q ss_pred hhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC--C--
Q 016069 235 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--N-- 308 (396)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~--~-- 308 (396)
.+.+++.+|+++.+ +.++.. +
T Consensus 323 -----------------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~ 349 (965)
T 2gag_A 323 -----------------------------------------------------AAQAVADGVQVISGSVVVDTEADENGE 349 (965)
T ss_dssp -----------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSC
T ss_pred -----------------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCC
Confidence 13456678888887 778865 3
Q ss_pred --eEEecC-------C--cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCC----ccCCCceEEEecccc
Q 016069 309 --EVIFEN-------G--HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNH----WKGKNGLYCVGLSRK 373 (396)
Q Consensus 309 --~v~~~~-------g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~vya~Gd~~~ 373 (396)
+|.+.+ | +++++|.|++|+|++|++..+.. . ++.+.++.... .|+.|+|||+|||+.
T Consensus 350 v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~-~-------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~ 421 (965)
T 2gag_A 350 LSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ-R-------QGKLDWDTTIHAFVPADAVANQHLAGAMTG 421 (965)
T ss_dssp EEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH-T-------TCCEEEETTTTEEEECSCCTTEEECGGGGT
T ss_pred EEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh-C-------CCcEEEcCcccccccCCCCCCEEEEEecCC
Confidence 466664 5 67899999999999999854322 2 23344442222 268999999999986
Q ss_pred c--ccCchHHHHHHHHHHhhhcC
Q 016069 374 G--LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 374 ~--~~~a~~~a~~~a~~i~~~l~ 394 (396)
. ...|..||+.+|.+|.+.+.
T Consensus 422 ~~~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 422 RLDTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHHHHHHHHcC
Confidence 5 33788999999999987653
No 87
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=8.5e-28 Score=250.01 Aligned_cols=277 Identities=16% Similarity=0.194 Sum_probs=183.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
.+||+|||||+||+++|..|+++|+ +|+|||+.+.+||.+... .+. +....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCc---------ccCCHHHHH
Confidence 5799999999999999999999999 799999998888875421 111 111234555
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCC-CCcccccc
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-RGLSSFCS 164 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~-~g~~~~~~ 164 (396)
+..+.+++.++++ +.++.+.. .. +++.++ ..+.||+||+|||. ..|+.+++ +|.+..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~-------~~--v~~~~~--------~~~~~d~vvlAtGa-~~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE-------NE--ITLNTL--------KEEGYKAAFIGIGL-PEPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST-------TS--BCHHHH--------HHTTCCEEEECCCC-CEECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc-------ce--EEhhhc--------CccCCCEEEEecCC-CCCCCCCCCCCCCCC--
Confidence 6566677777765 66665510 11 333332 34689999999994 14665543 344321
Q ss_pred CCCCCcceeeccCC--------------CCC-CCCCCCeEEEEcCCCCHHHHHHHHHhhcC-ceEEEEecCceeeehhhh
Q 016069 165 SATGTGEVIHSTQY--------------KNG-KPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPVHVLSREMV 228 (396)
Q Consensus 165 ~~~~~~~~~~~~~~--------------~~~-~~~~~~~i~VvG~G~~g~e~a~~l~~~g~-~v~~~~r~~~~~~p~~~~ 228 (396)
.+ +++..++ ... ....+++++|||+|.+|+|+|..+.+.|. +||+++|++...+|..+.
T Consensus 301 ----~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~ 375 (1025)
T 1gte_A 301 ----QG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE 375 (1025)
T ss_dssp ----TT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH
T ss_pred ----CC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH
Confidence 11 2221111 111 11236799999999999999999999996 899999987434443332
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEE
Q 016069 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (396)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~ 306 (396)
++ +.+++.+|+++.+ +.++.
T Consensus 376 e~----------------------------------------------------------~~~~~~Gv~~~~~~~~~~i~ 397 (1025)
T 1gte_A 376 EV----------------------------------------------------------ELAKEEKCEFLPFLSPRKVI 397 (1025)
T ss_dssp HH----------------------------------------------------------HHHHHTTCEEECSEEEEEEE
T ss_pred HH----------------------------------------------------------HHHHHcCCEEEeCCCceEEE
Confidence 21 1122334555443 33332
Q ss_pred C--Ce---EEec-------------CC--cEEeCcEEEECCCCCCCcccccccC-CCCCCCCCCCcCCCCCCCccCCCce
Q 016069 307 G--NE---VIFE-------------NG--HSHHFDSIVFCTGFKRSTNVWLKQG-DDSMLNDDGIPKQSYPNHWKGKNGL 365 (396)
Q Consensus 307 ~--~~---v~~~-------------~g--~~~~~D~vi~atG~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~v 365 (396)
. .. +.+. +| .++++|.||+|+|++|+...++. . .+..++++|++.+|.....|+.|+|
T Consensus 398 ~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~-~~~gl~~~~~G~I~vd~~~~~Ts~~~V 476 (1025)
T 1gte_A 398 VKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKE-ALSPIKFNRWDLPEVDPETMQTSEPWV 476 (1025)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHH-HTTTSCBCTTSSBCCCTTTCBCSSTTE
T ss_pred ccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhh-cccCceECCCCCEEECCCCCccCCCCE
Confidence 1 11 2221 12 36899999999999876545554 2 2345677899999865677899999
Q ss_pred EEEeccccc---ccCchHHHHHHHHHHhhhc
Q 016069 366 YCVGLSRKG---LYGAAADAQNIADHINSIL 393 (396)
Q Consensus 366 ya~Gd~~~~---~~~a~~~a~~~a~~i~~~l 393 (396)
||+||++.+ ...|..+|+.+|.+|.+.|
T Consensus 477 fA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 477 FAGGDIVGMANTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp EECSGGGCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999875 3489999999999998754
No 88
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=1e-27 Score=241.47 Aligned_cols=278 Identities=17% Similarity=0.204 Sum_probs=186.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|..... .+.+.....+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~----------------------~pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA----------------------LPGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT----------------------STTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc----------------------CCChHHHHHHHH
Confidence 3589999999999999999999999999999999988887763210 011112234555
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC------CCCCCCCCc
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRGL 159 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~------p~~~~~~g~ 159 (396)
++...++... ..+..++.+... . .+++.++ ..+.||+||+|||.... |..|+++|.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~~---~--~v~~~~~--------~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALGQ---K--PMTADDV--------LQYGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECSC---C--CCCHHHH--------HTSCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEeC---e--EEehhhc--------cccCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 5554444320 001111222111 1 1333332 35789999999995211 567778887
Q ss_pred cccccCCCCCcceeeccCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhc
Q 016069 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRY 237 (396)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG--~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~ 237 (396)
+.+ ...+++..++.......+++++||| +|.+|+|+|..|++.|.+|+++++.+ +++......
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~~------- 572 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFTL------- 572 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHTT-------
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccccccccc-------
Confidence 743 3345555554444444578999999 99999999999999999999999887 322211000
Q ss_pred CChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECCeEEec--
Q 016069 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE-- 313 (396)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~~v~~~-- 313 (396)
....+.+.+++.+|+++.+ +++++.+++.+.
T Consensus 573 ---------------------------------------------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~ 607 (729)
T 1o94_A 573 ---------------------------------------------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNI 607 (729)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEET
T ss_pred ---------------------------------------------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEe
Confidence 0011235567789999988 888888775542
Q ss_pred --CC-cE------------------EeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccc
Q 016069 314 --NG-HS------------------HHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSR 372 (396)
Q Consensus 314 --~g-~~------------------~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~ 372 (396)
++ ++ +++|.||+|+|++|++. ++. . ... .++ ..+.|+.|+|||+|||+
T Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~-l~~-~-l~~-------~vd-~~~~t~~~~VyAiGD~~ 676 (729)
T 1o94_A 608 WGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT-LWN-E-LKA-------RES-EWAENDIKGIYLIGDAE 676 (729)
T ss_dssp TCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH-HHH-H-HHH-------TGG-GTGGGTCCEEEECGGGT
T ss_pred cCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH-HHH-H-Hhh-------hcc-cccccCCCCeEEEeCcc
Confidence 33 33 89999999999999985 433 2 111 122 34557889999999997
Q ss_pred cc--ccCchHHHHHHHHHHhhhcC
Q 016069 373 KG--LYGAAADAQNIADHINSILS 394 (396)
Q Consensus 373 ~~--~~~a~~~a~~~a~~i~~~l~ 394 (396)
.. +..|..+|+.+|.+|.+.+.
T Consensus 677 ~~~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 677 APRLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp SCCCHHHHHHHHHHHHHTTTSSCT
T ss_pred chhhHHHHHHHHHHHHHHhhhhcc
Confidence 64 33799999999999988763
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.94 E-value=1.2e-28 Score=234.60 Aligned_cols=284 Identities=15% Similarity=0.145 Sum_probs=183.3
Q ss_pred CeEEEECCChHHHHHHHHHHh--cCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
+||+|||||++|+++|..|++ .+.+|+|||+.+..+..... +... .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~----------~~~~------------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF----------PHLA------------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH----------HHHH------------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc----------chhc------------cCccCHHHHHH
Confidence 699999999999999999999 78999999998755421100 0000 00001111111
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.+.+.+++.+++. + ..+|+.++.+. . .|.+.++ .++.||+||+|+| +.+..|. ....
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~--~--~v~~~~g--------~~i~~d~liiAtG--~~~~~pg---~~~~--- 117 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA--N--TVTTQSG--------KKIEYDYLVIATG--PKLVFGA---EGQE--- 117 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT--T--EEEETTC--------CEEECSEEEECCC--CEEECCS---BTHH---
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC--C--EEEECCC--------cEEECCEEEEcCC--cccccCC---CCCc---
Confidence 2222344456553 4 46888888654 3 3777654 5799999999999 6666553 2210
Q ss_pred CCCCcceeeccCCCCCCC--------CCCCeEEEEcCCCCH------HHHHHHHH----hhc----CceEEEEecCceee
Q 016069 166 ATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNSG------MEIALDLA----NHA----AKTSLVIRSPVHVL 223 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~--------~~~~~i~VvG~G~~g------~e~a~~l~----~~g----~~v~~~~r~~~~~~ 223 (396)
+...+.+...+... ..+++++|||+|.++ +|+|..++ +.| .+|+++.+.+. ..
T Consensus 118 ----g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~-~~ 192 (430)
T 3h28_A 118 ----ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPY-LG 192 (430)
T ss_dssp ----HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSS-TT
T ss_pred ----CCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcc-cc
Confidence 11111111111000 013467889987654 88885554 445 46888887762 10
Q ss_pred ehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--
Q 016069 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (396)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-- 301 (396)
+.... ..+.....+.+.+++.+|+++.+
T Consensus 193 ~~~l~--------------------------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~ 222 (430)
T 3h28_A 193 HFGVG--------------------------------------------------GIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CTTTT--------------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred ccccC--------------------------------------------------cchHHHHHHHHHHHHCCCEEEeCCE
Confidence 00000 00111122346678889999988
Q ss_pred ceeEECCeEEecC----CcEEeCcEEEECCCCCCCcccccccCC-CCCCCCCC-CcCCCCCCCccCCCceEEEecccccc
Q 016069 302 IESIRGNEVIFEN----GHSHHFDSIVFCTGFKRSTNVWLKQGD-DSMLNDDG-IPKQSYPNHWKGKNGLYCVGLSRKGL 375 (396)
Q Consensus 302 v~~~~~~~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~~~~~vya~Gd~~~~~ 375 (396)
|++++.+++.+++ ++++++|.+++|+|++++. ++. .. ..+.+++| ++.+|...+.++.|+|||+|||+...
T Consensus 223 v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~--~l~-~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~ 299 (430)
T 3h28_A 223 VKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE--VVA-SAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp EEEECSSEEEEECTTSCEEEEECSEEEEECEEECCH--HHH-TTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCC
T ss_pred EEEEeCCeEEEEecCCCceEEeeeEEEECCCCccch--hHh-hccccCcCCCCCEEecCccccCCCCCCEEEEEeeeccC
Confidence 9999999988887 7899999999999999875 333 21 23578889 89998655555899999999997642
Q ss_pred ---------------cCchHHHHHHHHHHhhhcC
Q 016069 376 ---------------YGAAADAQNIADHINSILS 394 (396)
Q Consensus 376 ---------------~~a~~~a~~~a~~i~~~l~ 394 (396)
..|..||+.+|+||.+.+.
T Consensus 300 ~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~ 333 (430)
T 3h28_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 2789999999999999875
No 90
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.94 E-value=2.8e-29 Score=238.66 Aligned_cols=285 Identities=18% Similarity=0.190 Sum_probs=173.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
++|+|||||+||+++|..|++.+ .+|+|||+++...- . +.+. .... . ..+.+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~--~----p~l~-~v~~------g---------~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF--T----PAFP-HLAM------G---------WRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC--G----GGHH-HHHH------T---------CSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCcc--C----ccHH-HHhc------C---------CCCHHHhhh
Confidence 58999999999999999999865 68999999873210 0 0000 0000 0 000111111
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
.++..+++.+++ +...+|++|+.+. +. |++.++ .++.||+||+||| +++. ++++|.++..
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~--~~--V~~~~g--------~~i~YD~LViAtG--~~~~-~~i~G~~e~~-- 120 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA--NT--VTTQSG--------KKIEYDYLVIATG--PKLV-FGAEGQEENS-- 120 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT--TE--EEETTC--------CEEECSEEEECCC--CEEE-CCSBTHHHHS--
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC--CE--EEECCC--------CEEECCEEEEeCC--CCcc-CCccCcccCc--
Confidence 112223445655 4566899998765 43 888776 6799999999999 5543 4577765431
Q ss_pred CCCCcceeeccCCCC-------CCC-CCCCeEEEEcCCC------CHHHHHHHHH----hhc----CceEEEEecCceee
Q 016069 166 ATGTGEVIHSTQYKN-------GKP-YGGKNVLVVGSGN------SGMEIALDLA----NHA----AKTSLVIRSPVHVL 223 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~-------~~~-~~~~~i~VvG~G~------~g~e~a~~l~----~~g----~~v~~~~r~~~~~~ 223 (396)
...+...+ ... ..++.++|+|++. .+.|++..+. +.+ .+|+++...+. +
T Consensus 121 -------~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~--l 191 (430)
T 3hyw_A 121 -------TSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPY--L 191 (430)
T ss_dssp -------CCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSS--T
T ss_pred -------CCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccch--h
Confidence 11111100 001 1134455555543 1234443332 333 34666655441 1
Q ss_pred ehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--
Q 016069 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (396)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-- 301 (396)
+..... ..+.....+.+.+++.+|+++.+
T Consensus 192 ~~~~~~-------------------------------------------------~~~~~~~~l~~~l~~~GV~~~~~~~ 222 (430)
T 3hyw_A 192 GHFGVG-------------------------------------------------GIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp TCTTTT-------------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred hhccch-------------------------------------------------hhHHHHHHHHHHHHhCCeEEEeCce
Confidence 110000 00111112345677889999998
Q ss_pred ceeEECCeEEecC----CcEEeCcEEEECCCCCCCcccccccCCCCC-CCCCCCcCCCCCCCccCCCceEEEecccccc-
Q 016069 302 IESIRGNEVIFEN----GHSHHFDSIVFCTGFKRSTNVWLKQGDDSM-LNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL- 375 (396)
Q Consensus 302 v~~~~~~~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~- 375 (396)
|++++++.+.+++ ++++++|.+++++|.+|+. .+.. ....+ .+.+|++.++...+.++.|||||+|||+..+
T Consensus 223 v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~-~~~~-~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~ 300 (430)
T 3hyw_A 223 VKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE-VVAS-AGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp EEEECSSEEEEECTTSCEEEEECSEEEEECEEECCH-HHHT-TCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCC
T ss_pred EEEEeCCceEEEeeCCCceEeecceEEEeccCCCch-HHHh-cccccccCCceEEEecccccCCCCCCEEEeccEEecCC
Confidence 9999999888764 3578999999999999975 3333 21223 4556778888666779999999999997542
Q ss_pred --------------cCchHHHHHHHHHHhhhcC
Q 016069 376 --------------YGAAADAQNIADHINSILS 394 (396)
Q Consensus 376 --------------~~a~~~a~~~a~~i~~~l~ 394 (396)
..|.+||+.+|+||.+.+.
T Consensus 301 ~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~ 333 (430)
T 3hyw_A 301 IEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp SSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCcCcCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 1688999999999998875
No 91
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.94 E-value=2.5e-27 Score=223.69 Aligned_cols=285 Identities=18% Similarity=0.176 Sum_probs=180.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
.++|+|||||+||+++|..|++.+ .+|+|||+++...... .+. ... .. ..+.+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p------~~~-~v~------~g---------~~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY------MSN-EVI------GG---------DRELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST------THH-HHH------HT---------SSCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc------CHH-HHh------cC---------CCCHHHHh
Confidence 368999999999999999998875 5899999987422100 000 000 00 00011111
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
..+.. +...+++ +...+|++++.+. +. +.+.++ .++.||+||+|+| +.++++.++|.++.
T Consensus 60 ~~~~~-~~~~gv~---~i~~~v~~id~~~--~~--v~~~~g--------~~i~yd~LviAtG--~~~~~~~i~G~~e~-- 119 (401)
T 3vrd_B 60 VGYDG-LRAHGIQ---VVHDSALGIDPDK--KL--VKTAGG--------AEFAYDRCVVAPG--IDLLYDKIEGYSEA-- 119 (401)
T ss_dssp ECSHH-HHHTTCE---EECSCEEEEETTT--TE--EEETTS--------CEEECSEEEECCC--EEECGGGSBTCCSG--
T ss_pred hCHHH-HHHCCCE---EEEeEEEEEEccC--cE--EEeccc--------ceeecceeeeccC--CccccCCccCchhh--
Confidence 11111 2234665 4667899998754 33 777765 6799999999999 78888888887754
Q ss_pred CCCCCcc-eeeccCCCC--------CCCCCCCeEEEEcCCCC-------H----HHHHHHHHhhc--CceEEEEecCcee
Q 016069 165 SATGTGE-VIHSTQYKN--------GKPYGGKNVLVVGSGNS-------G----MEIALDLANHA--AKTSLVIRSPVHV 222 (396)
Q Consensus 165 ~~~~~~~-~~~~~~~~~--------~~~~~~~~i~VvG~G~~-------g----~e~a~~l~~~g--~~v~~~~r~~~~~ 222 (396)
.+. ..+...... .........+|+++|.. + ++++..+.+.+ .+|+++.+.+...
T Consensus 120 ----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~ 195 (401)
T 3vrd_B 120 ----LAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFS 195 (401)
T ss_dssp ----GGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCT
T ss_pred ----cccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccc
Confidence 211 122211110 01122334444443332 2 45555555554 5788888776321
Q ss_pred -eehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC
Q 016069 223 -LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (396)
Q Consensus 223 -~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~ 301 (396)
++..+..+... +...+++.+|+++.+
T Consensus 196 ~~~~~~~~~~~~-----------------------------------------------------~~~~l~~~gi~v~~~ 222 (401)
T 3vrd_B 196 KQAQFTKGWERL-----------------------------------------------------YGFGTENALIEWHPG 222 (401)
T ss_dssp THHHHHHHHHHH-----------------------------------------------------SCTTSTTCSEEEECT
T ss_pred ccccccHHHHHH-----------------------------------------------------HHHHHHhcCcEEEeC
Confidence 11111111111 134567789999887
Q ss_pred --ceeEECC----eEEecCCcEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCC-CCccCCCceEEEeccccc
Q 016069 302 --IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYP-NHWKGKNGLYCVGLSRKG 374 (396)
Q Consensus 302 --v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~vya~Gd~~~~ 374 (396)
+..++.+ .+.+++|+++++|.+++++|.+|+. ++. . ..+.+++|++.+|.. .+.++.|||||+|||+..
T Consensus 223 ~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~--~~~-~-~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~ 298 (401)
T 3vrd_B 223 PDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGK--IAQ-S-ASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNA 298 (401)
T ss_dssp TTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECH--HHH-H-TTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCC
T ss_pred ceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCch--hHh-h-ccccccCCCEEECCCcceecCCCCEEEecccccC
Confidence 6666532 4888999999999999999999875 444 3 445788999999865 456899999999999764
Q ss_pred c------cCchHHHHHHHHHHhhhcC
Q 016069 375 L------YGAAADAQNIADHINSILS 394 (396)
Q Consensus 375 ~------~~a~~~a~~~a~~i~~~l~ 394 (396)
. ..|..||..+|+||.+.+.
T Consensus 299 ~~~pk~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 299 APMPKSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp TTSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 2 2788999999999998764
No 92
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=1.3e-26 Score=232.12 Aligned_cols=273 Identities=18% Similarity=0.219 Sum_probs=178.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... .+ +......++..+
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~~~ 430 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETLRY 430 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHHHH
Confidence 58999999999999999999999999999999988888765210 00 111223455566
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEE-EeCEEEEeecCCCCCCCCCCCCccccccC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYY-SGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~-~~d~vviAtG~~s~p~~~~~~g~~~~~~~ 165 (396)
+...+++.++++ +.++.|.. ..+ .||+||+||| +.|+.|.++|.+..
T Consensus 431 ~~~~~~~~gv~~--~~~~~v~~-------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~~--- 478 (671)
T 1ps9_A 431 YRRMIEVTGVTL--KLNHTVTA-------------------------DQLQAFDETILASG--IVPRTPPIDGIDHP--- 478 (671)
T ss_dssp HHHHHHHHTCEE--EESCCCCS-------------------------SSSCCSSEEEECCC--EEECCCCCBTTTST---
T ss_pred HHHHHHHcCCEE--EeCcEecH-------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCCC---
Confidence 666677777665 66554310 123 7899999999 78888888887642
Q ss_pred CCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEE---------------ecCce-eeehhhhH
Q 016069 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVI---------------RSPVH-VLSREMVY 229 (396)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~---------------r~~~~-~~p~~~~~ 229 (396)
..++..++.......+++++|||+|.+|+|+|..|++.|.+|++.. +.... ..|....
T Consensus 479 -----~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 552 (671)
T 1ps9_A 479 -----KVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPR- 552 (671)
T ss_dssp -----TEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCC-
T ss_pred -----cEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCC-
Confidence 3455555444444558999999999999999999999987665321 00000 0000000
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEEC
Q 016069 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (396)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~ 307 (396)
...+..+-..... .+. ....+.....+.+.+++.+|+++.+ ++++++
T Consensus 553 ---------------------------~~~~v~l~~~~~~-~l~---~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 601 (671)
T 1ps9_A 553 ---------------------------SPRQIVMLQRKAS-KPG---QGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD 601 (671)
T ss_dssp ---------------------------CSSEEEEECSSCS-CTT---TTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET
T ss_pred ---------------------------CCcEEEEEEecch-hhc---cccccccHHHHHHHHHhcCCEEEeCcEEEEEeC
Confidence 0000000000000 000 0001111122346678889999988 889998
Q ss_pred CeEEe-cCC--cEEeCcEEEECCCCCCCcccccccCCCCCCCCCCCcCCCCCCCccCCCceEEEeccccc----ccCchH
Q 016069 308 NEVIF-ENG--HSHHFDSIVFCTGFKRSTNVWLKQGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAA 380 (396)
Q Consensus 308 ~~v~~-~~g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~ 380 (396)
+++.+ .+| +++++|.||+|+|++||+. ++. . + .. ..++||++|||+.. ...|.+
T Consensus 602 ~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~-l~~-~---l-~~-------------~g~~v~aiGD~~~~~~~~~~~A~~ 662 (671)
T 1ps9_A 602 DGLHVVINGETQVLAVDNVVICAGQEPNRA-LAQ-P---L-ID-------------SGKTVHLIGGCDVAMELDARRAIA 662 (671)
T ss_dssp TEEEEEETTEEEEECCSEEEECCCEEECCT-THH-H---H-HT-------------TTCCEEECGGGTCCSSCCHHHHHH
T ss_pred CeEEEecCCeEEEEeCCEEEECCCccccHH-HHH-H---H-Hh-------------cCCCEEEECCcCccCchhHHHHHH
Confidence 88877 688 5789999999999999984 333 1 0 00 12689999999764 347899
Q ss_pred HHHHHHHHH
Q 016069 381 DAQNIADHI 389 (396)
Q Consensus 381 ~a~~~a~~i 389 (396)
||..+|.+|
T Consensus 663 ~g~~aA~~i 671 (671)
T 1ps9_A 663 QGTRLALEI 671 (671)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999875
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=3.8e-25 Score=213.56 Aligned_cols=255 Identities=18% Similarity=0.173 Sum_probs=168.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
++||+|||||++|+++|..|++. .+|+|+|+.+..||.|....+. .+. + +. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---~------~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---F------NK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---T------TE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---C------CC--CHHHHHHH
Confidence 36899999999999999999999 9999999999888876532110 000 0 10 23333333
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~~~ 166 (396)
+.+.. ..+++ +++++.|.+++.+. ..|.+...+. ++. ..+.||+||+||| +.|+.|.++|.+..
T Consensus 167 l~~~l-~~~v~--~~~~~~v~~i~~~~--~~~~~~~~~~---~~~--~~~~~d~lvlAtG--a~~~~~~~~g~~~~---- 230 (493)
T 1y56_A 167 LVGKL-NENTK--IYLETSALGVFDKG--EYFLVPVVRG---DKL--IEILAKRVVLATG--AIDSTMLFENNDMP---- 230 (493)
T ss_dssp HHHTC-CTTEE--EETTEEECCCEECS--SSEEEEEEET---TEE--EEEEESCEEECCC--EEECCCCCTTTTST----
T ss_pred HHHHH-hcCCE--EEcCCEEEEEEcCC--cEEEEEEecC---CeE--EEEECCEEEECCC--CCccCCCCCCCCCC----
Confidence 32222 33444 48899999888765 5555554322 121 4789999999999 67888888877532
Q ss_pred CCCcceeeccCCC----CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhh
Q 016069 167 TGTGEVIHSTQYK----NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGG 242 (396)
Q Consensus 167 ~~~~~~~~~~~~~----~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 242 (396)
+ +++..... ......+++++|+|+|.+|+| ..+.+.
T Consensus 231 ---g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~---------------------------------- 270 (493)
T 1y56_A 231 ---G-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERW---------------------------------- 270 (493)
T ss_dssp ---T-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHH----------------------------------
T ss_pred ---C-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhC----------------------------------
Confidence 2 33322111 112234689999999999998 223233
Q ss_pred HHHHHHHHHHHHhccccccCcCCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC----eEEecCCc
Q 016069 243 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFENGH 316 (396)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~----~v~~~~g~ 316 (396)
+|+++.+ +.+++.+ .+.+++|+
T Consensus 271 ----------------------------------------------------GV~v~~~~~v~~i~~~~~v~~v~~~~g~ 298 (493)
T 1y56_A 271 ----------------------------------------------------GIDYVHIPNVKRVEGNEKVERVIDMNNH 298 (493)
T ss_dssp ----------------------------------------------------TCEEEECSSEEEEECSSSCCEEEETTCC
T ss_pred ----------------------------------------------------CcEEEeCCeeEEEecCCceEEEEeCCCe
Confidence 3333333 3444332 35677889
Q ss_pred EEeCcEEEECCCCCCCcccccccCCCCC-CCCCCCcC-CCCCCCccCCCceEEEeccccc--ccCchHHHHHHHHHHhhh
Q 016069 317 SHHFDSIVFCTGFKRSTNVWLKQGDDSM-LNDDGIPK-QSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIADHINSI 392 (396)
Q Consensus 317 ~~~~D~vi~atG~~~~~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~vya~Gd~~~~--~~~a~~~a~~~a~~i~~~ 392 (396)
++++|.||+|+|++|+...+-. .+... .+++|++. ++.. +. +.|+||++|||+.. ...|..||+.+|.+|...
T Consensus 299 ~i~aD~Vv~a~G~~p~~~l~~~-~g~~~~~~~~g~i~~vd~~-~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 299 EYKVDALIFADGRRPDINPITQ-AGGKLRFRRGYYSPVLDEY-HR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp EEECSEEEECCCEEECCHHHHH-TTCCEEEETTEEEECCCTT-SE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCEEEECCCcCcCchHHHh-cCCCccccCCceeeccccc-cC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854323 21112 24577765 5533 33 88999999999865 448889999999999876
Q ss_pred c
Q 016069 393 L 393 (396)
Q Consensus 393 l 393 (396)
+
T Consensus 376 l 376 (493)
T 1y56_A 376 F 376 (493)
T ss_dssp T
T ss_pred c
Confidence 5
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.66 E-value=2.8e-16 Score=130.83 Aligned_cols=160 Identities=22% Similarity=0.254 Sum_probs=109.5
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCCC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPR 267 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (396)
+++|||+|++|+++|..|++.|.+|+++++++. .++... .+..+ | ++ +.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~-~~~~~~-----~~~~~-~----------------------~~--~~ 51 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRS-KVKGVS-----RVPNY-P----------------------GL--LD 51 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-TTTTCS-----CCCCS-T----------------------TC--TT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC-cccCch-----hhhcc-C----------------------CC--cC
Confidence 689999999999999999999999999999872 221100 00000 0 00 00
Q ss_pred CCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC----eEEecCCcEEeCcEEEECCCCCCCcccccccCCC
Q 016069 268 EGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQGDD 342 (396)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~ 342 (396)
....+.....+.+.+++.+++++.+ +++++.+ .+.+++| ++++|.||+|+|..|+....+.
T Consensus 52 ---------~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g---- 117 (180)
T 2ywl_A 52 ---------EPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLG---- 117 (180)
T ss_dssp ---------CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHT----
T ss_pred ---------CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCC----
Confidence 0001122223345566678888877 7777643 2666677 8999999999999986522222
Q ss_pred CCCCCCCCcCCCCCCCccCCCceEEEecccccc----cCchHHHHHHHHHHhhhcC
Q 016069 343 SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHINSILS 394 (396)
Q Consensus 343 ~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~~i~~~l~ 394 (396)
...+ +|.+.+| +...|+.|+|||+||++... ..|..+|+.+|.+|.+.+.
T Consensus 118 ~~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 118 LTRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp CCEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhh
Confidence 2344 7888777 35567899999999998764 3788999999999988653
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.62 E-value=4.9e-19 Score=162.00 Aligned_cols=150 Identities=14% Similarity=0.046 Sum_probs=98.5
Q ss_pred CCeEEEECCChHHHHHHHHHHh--cCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
.+||+||||||||++||..|++ .|++|+|+|+.+.+||......+. ++...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~-------------------------~~~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL-------------------------FSAMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT-------------------------CCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc-------------------------CCHHHHH
Confidence 4799999999999999999975 599999999998888754321100 0000000
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~g~~~~~~ 164 (396)
..+...++++++++ ..+. . .....+.++++++ ..++.+.++|...+
T Consensus 120 ~~~~~~~~e~Gv~~--~~~~-----------~-----------------~~~~~~~~~~~~~--~~~~~~~~~g~~~~-- 165 (326)
T 3fpz_A 120 KPAHLFLQELEIPY--EDEG-----------D-----------------YVVVKHAALFIST--VLSKVLQLPNVKLF-- 165 (326)
T ss_dssp TTTHHHHHHTTCCC--EECS-----------S-----------------EEEESCHHHHHHH--HHHHHHTSTTEEEE--
T ss_pred HHHHHHHHHcCCEE--EECC-----------c-----------------ceecceeEEEEcc--hhhhccccccceee--
Confidence 11122344556543 2110 0 2333444555666 45566667777666
Q ss_pred CCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+.....+...+.....+++++|+|+|.++++.+..+...+.++++..+..
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 ----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp ----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 454444444455555668999999999999999999999999998887655
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.60 E-value=3.2e-15 Score=140.16 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=87.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc---------CCcCc--eee-ccccccc----cC-----
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYDR--LRL-HLAKQFC----QL----- 65 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~---------~~~~~--~~~-~~~~~~~----~~----- 65 (396)
++||+|||||++|+++|..|+++|.+|+|+|+.+..|+.|.. +.... ..+ ..+.... .+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999999877654421 00000 000 0000000 00
Q ss_pred ------CCCCC--CCCCCCCC--CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCC--CCceEEEEeecCCCCceee
Q 016069 66 ------PHLPF--PSSYPMFV--SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIE 133 (396)
Q Consensus 66 ------~~~~~--~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~g~~~~ 133 (396)
...++ ..+-..|+ ...++.+.+.+.+++.++++ ++++.|+++..+++ .+.|.|.+.+
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i--~~~~~v~~i~~~~~g~~~~~~v~~~~--------- 152 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI--LLRSEVSQVERIQNDEKVRFVLQVNS--------- 152 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE--ECSCCEEEEEECCSCSSCCEEEEETT---------
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE--EeCCEEEEEEcccCcCCCeEEEEECC---------
Confidence 00000 00001111 56788888888888888776 99999999987510 1457777654
Q ss_pred EEEEeCEEEEeecCCCCCC
Q 016069 134 EYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 134 ~~~~~d~vviAtG~~s~p~ 152 (396)
.++++|.||+|||.++.|.
T Consensus 153 g~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 153 TQWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp EEEEESEEEECCCCSSCGG
T ss_pred CEEECCEEEECCCCccCCC
Confidence 5699999999999766543
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.52 E-value=1.1e-15 Score=146.38 Aligned_cols=192 Identities=12% Similarity=0.057 Sum_probs=102.1
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcc--cccCC-----cC--cee--ec--------------------
Q 016069 9 EVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI--WKKYS-----YD--RLR--LH-------------------- 57 (396)
Q Consensus 9 ~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~--~~~~~-----~~--~~~--~~-------------------- 57 (396)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|. |.... .+ ... +.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44432 11100 00 000 00
Q ss_pred -ccc---ccccCCCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCce-E
Q 016069 58 -LAK---QFCQLPHLPFPS--------SYP-----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW-N 119 (396)
Q Consensus 58 -~~~---~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~ 119 (396)
.+. .+.. ...++.. ..+ ...+...+...+.+.+++.++++ +.++.| ++..++ +.+ .
T Consensus 80 ~~~~~i~~l~~-~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~G 153 (472)
T 2e5v_A 80 EAKNVIETFES-WGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTG 153 (472)
T ss_dssp HHHHHHHHHHH-TTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEE
T ss_pred HHHHHHHHHHH-cCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEE
Confidence 000 0000 0000000 000 11235577777777777778776 899999 997654 332 2
Q ss_pred EEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCC-CccccccCCCCCcceeecc-----CCCCCCCCCCC-eEEEE
Q 016069 120 VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIR-GLSSFCSSATGTGEVIHST-----QYKNGKPYGGK-NVLVV 192 (396)
Q Consensus 120 v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~~-g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~i~Vv 192 (396)
+...+. + ..+.+|.||+|||.+ +..+... +.... .|..+..+ ...+.+..+.. .++++
T Consensus 154 v~v~~~-~------g~~~a~~VVlAtGg~--~~~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ 218 (472)
T 2e5v_A 154 FVTEKR-G------LVEDVDKLVLATGGY--SYLYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSL 218 (472)
T ss_dssp EEETTT-E------EECCCSEEEECCCCC--GGGSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECG
T ss_pred EEEEeC-C------CeEEeeeEEECCCCC--cccCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEcc
Confidence 333221 1 457899999999964 3333321 11111 22211110 11122211112 33455
Q ss_pred cCCCCHHHHHHHHHhhcCceEEEEecCceeeehh
Q 016069 193 GSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (396)
Q Consensus 193 G~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (396)
|+| +++++..+...|..+ +..+.+ ++++..
T Consensus 219 ggg--~~~~ae~~~~~G~~~-v~~~g~-rf~~~~ 248 (472)
T 2e5v_A 219 DGE--VFLLTETLRGEGAQI-INENGE-RFLFNY 248 (472)
T ss_dssp GGC--CEECCTHHHHTTCEE-EETTCC-CGGGGT
T ss_pred CCC--ceeeehhhcCCceEE-ECCCCC-CCCccC
Confidence 666 778877777777766 444444 555443
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.32 E-value=8.9e-12 Score=117.13 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=89.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC-----------C-cCceeecccccc----ccC-----
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-----------S-YDRLRLHLAKQF----CQL----- 65 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~-----------~-~~~~~~~~~~~~----~~~----- 65 (396)
.+||+|||||++|+++|..|+++|.+|+|+|+.+..|+.+... . ........+... ..+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 5799999999999999999999999999999998877644110 0 000000000000 000
Q ss_pred ------CCCCCCC--CCCC--CCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE
Q 016069 66 ------PHLPFPS--SYPM--FVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (396)
Q Consensus 66 ------~~~~~~~--~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~ 135 (396)
...++.. .-.. ......+.+.+.+.+++.++.+ +++++|+++..++ +.|.|.+.+ .+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~---------g~ 173 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA---------GT 173 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT---------EE
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC---------cE
Confidence 0000000 0000 1355688888888888888776 9999999998875 568888765 57
Q ss_pred EEeCEEEEeecCCCCCCC
Q 016069 136 YSGRFLVVASGETSNPFT 153 (396)
Q Consensus 136 ~~~d~vviAtG~~s~p~~ 153 (396)
+++|.||+|+|.++.|..
T Consensus 174 i~ad~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 174 VDAASLVVASGGKSIPKM 191 (417)
T ss_dssp EEESEEEECCCCSSCGGG
T ss_pred EEeeEEEECCCCccCCCC
Confidence 999999999998775543
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.30 E-value=3.5e-12 Score=110.42 Aligned_cols=176 Identities=19% Similarity=0.194 Sum_probs=100.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKP 266 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (396)
..++|||+|++|+++|..|++.|.+|+++++++...- .... ..+.......+...+ . +
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~---~~~~~~~~~~~~~~~----~-----d--------- 61 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFL---PPKPPFPPGSLLERA----Y-----D--------- 61 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSS---CCCSCCCTTCHHHHH----C-----C---------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccC---ccccccchhhHHhhh----c-----c---------
Confidence 4699999999999999999999999999998742110 0000 000000000010000 0 0
Q ss_pred CCCcchhhhccCCccccCchhhhhhcCC-CeEEccC-ceeEECC-----eEEecCCcEEeCcEEEECCCCCCCccccccc
Q 016069 267 REGPFFMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG-IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKQ 339 (396)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~v~~~-v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~ 339 (396)
..++ ....+...+.+.+++. +++++.. ++++..+ ++.+.+|+++++|.||+|+|...+.......
T Consensus 62 ~~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 62 PKDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp TTCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred CCCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 0000 0112333445666664 8888855 7777532 3667788899999999999996554211100
Q ss_pred ---------------------CCCCCCC--------CCCCcC-------C------CCCCCccCCCceEEEecccccc--
Q 016069 340 ---------------------GDDSMLN--------DDGIPK-------Q------SYPNHWKGKNGLYCVGLSRKGL-- 375 (396)
Q Consensus 340 ---------------------~~~~~~~--------~~g~~~-------~------~~~~~~~~~~~vya~Gd~~~~~-- 375 (396)
+.+..+. ..|.|. . ......|+.|+||++|||+ ..
T Consensus 134 ~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~ 212 (232)
T 2cul_A 134 VVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGD 212 (232)
T ss_dssp EEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCC
T ss_pred ccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCcc
Confidence 0000000 001100 0 0001225899999999999 42
Q ss_pred -cCchHHHHHHHHHHhhhc
Q 016069 376 -YGAAADAQNIADHINSIL 393 (396)
Q Consensus 376 -~~a~~~a~~~a~~i~~~l 393 (396)
..+..||+.+|.+|.+.|
T Consensus 213 ~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 213 YARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 267899999999999876
No 100
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.29 E-value=2.3e-11 Score=115.04 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=86.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC----CCCcccccCC--------------------cCceeecccccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN----CYASIWKKYS--------------------YDRLRLHLAKQF 62 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~----~~gg~~~~~~--------------------~~~~~~~~~~~~ 62 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.. ..|....... ............
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 4899999999999999999999999999999976 2232111100 001111111111
Q ss_pred cc--CCCCC-CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCce--EEEEeecCCCCceeeEEEE
Q 016069 63 CQ--LPHLP-FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW--NVKASNLLSPGRVIEEYYS 137 (396)
Q Consensus 63 ~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~--~v~~~~~~~~g~~~~~~~~ 137 (396)
.. +.... ..........+..+...+.+.+.+.|+++ +++++|++++.++ +.+ .+.+.++ +. .+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~v~v~~~~g----~~--~~~~ 154 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV--EYEVGVTDIKFFG--TDSVTTIEDING----NK--REIE 154 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEET--TEEEEEEEETTS----CE--EEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCCC----CE--EEEE
Confidence 11 11000 00111223678899999998888888776 9999999998875 444 3444443 21 4799
Q ss_pred eCEEEEeecCCC
Q 016069 138 GRFLVVASGETS 149 (396)
Q Consensus 138 ~d~vviAtG~~s 149 (396)
+|.||+|+|.++
T Consensus 155 a~~vV~A~G~~s 166 (421)
T 3nix_A 155 ARFIIDASGYGR 166 (421)
T ss_dssp EEEEEECCGGGC
T ss_pred cCEEEECCCCch
Confidence 999999999654
No 101
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.28 E-value=9.6e-12 Score=116.36 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=85.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc------c----------------CCcCceeecccccccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK------K----------------YSYDRLRLHLAKQFCQ 64 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~------~----------------~~~~~~~~~~~~~~~~ 64 (396)
.|||+||||||+|+++|..|+++|++|+|+|+.+.+|.... . ....+..+..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 48999999999999999999999999999999775543111 0 0011111111111000
Q ss_pred --CCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEE
Q 016069 65 --LPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (396)
Q Consensus 65 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vv 142 (396)
+..............+..+...+.+.+.+.|..+ ++++.|+++..++ +.......... ++. .++++|+||
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~--~~~--~~~~a~~vI 155 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHN--NEI--VDVRAKMVI 155 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEET--TEE--EEEEEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeeccc--ccc--eEEEEeEEE
Confidence 0000000011123578899999998888888877 9999999988765 33322222111 122 679999999
Q ss_pred EeecCCC
Q 016069 143 VASGETS 149 (396)
Q Consensus 143 iAtG~~s 149 (396)
.|+|..|
T Consensus 156 gAdG~~S 162 (397)
T 3oz2_A 156 AADGFES 162 (397)
T ss_dssp ECCCTTC
T ss_pred eCCcccc
Confidence 9999755
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.28 E-value=1.3e-11 Score=115.65 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=87.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC------------Cc----------Cceeecccccc--
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------SY----------DRLRLHLAKQF-- 62 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~------------~~----------~~~~~~~~~~~-- 62 (396)
++||+|||||++|+++|..|+++|++|+|+|+....|+..... .. ..+....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4899999999999999999999999999999987655422110 00 01111111100
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceE-EEEeecCCCCceeeEEEEeCEE
Q 016069 63 CQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~d~v 141 (396)
..+..............+..+...+.+.+.+.|+++ +++++|+++..++ +.+. |++.+. ++. .++++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~---~~~--~~~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHN---NEI--VDVRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEET---TEE--EEEEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE--EECCEEEEEEEeC--CEEEEEEEEEC---CeE--EEEEcCEE
Confidence 011100000111223577888899988888888776 9999999998875 5665 666432 111 68999999
Q ss_pred EEeecCCC
Q 016069 142 VVASGETS 149 (396)
Q Consensus 142 viAtG~~s 149 (396)
|.|+|.+|
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999765
No 103
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.28 E-value=5.1e-11 Score=98.74 Aligned_cols=111 Identities=20% Similarity=0.278 Sum_probs=81.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (396)
+|++|||||++|+.+|..|++.|.+|+|+|+.+..- ... ..+..++.+ +......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~---~~~----------~~~~~~~~~------~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV---KGV----------SRVPNYPGL------LDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT---TTC----------SCCCCSTTC------TTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc---cCc----------hhhhccCCC------cCCCCHHHHHHHH
Confidence 699999999999999999999999999999976221 100 000001111 1124578899999
Q ss_pred HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+++.++++ +.+ +|++++.++ +.|.+++.+ .++++|.||+|+| ..|.+
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~---------g~i~ad~vI~A~G--~~~~~ 112 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE---------GVEKAERLLLCTH--KDPTL 112 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS---------CEEEEEEEEECCT--TCCHH
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC---------CEEEECEEEECCC--CCCCc
Confidence 99899888776 888 999998765 557777654 4689999999999 45543
No 104
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.25 E-value=7e-12 Score=122.19 Aligned_cols=168 Identities=14% Similarity=0.148 Sum_probs=99.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCcccccCCcCceee----------c-ccc--------ccccCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRL----------H-LAK--------QFCQLP 66 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~----------~-~~~--------~~~~~~ 66 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.. .+|.... .+.... . ... ....+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C---nps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC---NPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS---SSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc---cccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 5899999999999999999999999999999874 2331100 000000 0 000 000000
Q ss_pred C---CCCCC-C-CCCCCCHHHHHHHHHHHHHh-cCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCE
Q 016069 67 H---LPFPS-S-YPMFVSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (396)
Q Consensus 67 ~---~~~~~-~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~ 140 (396)
. ...+. + .....++..+...+.+.+++ .++. .+++.|+++..++ +..+.|.+.++ ..+.+|.
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~---I~~~~V~~L~~e~-g~V~GV~t~dG--------~~I~Ad~ 172 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLM---IFQQAVEDLIVEN-DRVVGAVTQMG--------LKFRAKA 172 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE---EEECCEEEEEESS-SBEEEEEETTS--------EEEEEEE
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCE---EEEEEEEEEEecC-CEEEEEEECCC--------CEEECCE
Confidence 0 00000 0 00123556778888887877 4655 3578999997754 23345777654 6799999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEe
Q 016069 141 LVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (396)
Q Consensus 141 vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r 217 (396)
||+|||.+ +..+.++|...+ . +.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 173 VVLATGt~--s~~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 173 VVLTVGTF--LDGKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEECCSTT--TCCEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EEEcCCCC--ccCccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 99999954 443444444332 0 222 56 78899999999999999988853
No 105
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.23 E-value=3.7e-11 Score=103.90 Aligned_cols=124 Identities=16% Similarity=0.058 Sum_probs=80.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
.+||+|||||++|+++|..|+++|.+|+|+|+.....|.|......... ....+..+.. ..-+.+..+..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~--~~~~~~~~~d-------~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFP--PGSLLERAYD-------PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCC--TTCHHHHHCC-------TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccc--hhhHHhhhcc-------CCCCCHHHHHHH
Confidence 5899999999999999999999999999999974322322111000000 0000000000 000156688888
Q ss_pred HHHHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016069 87 LDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (396)
Q Consensus 87 l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p 151 (396)
+.+.+++. ++.+ + +++|+++..++ +..+.|.+.++ .++++|+||+|+|.++..
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~-~~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG-NRVVGVRTWEG--------PPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET-TEEEEEEETTS--------CCEECSEEEECCTTCSSC
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC-CEEEEEEECCC--------CEEECCEEEECCCCChhh
Confidence 88888876 7664 5 67999998764 23345666554 569999999999965443
No 106
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.22 E-value=5.7e-11 Score=116.18 Aligned_cols=134 Identities=17% Similarity=0.155 Sum_probs=85.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc-------------------ccccCCcCceeec---cccc---
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS-------------------IWKKYSYDRLRLH---LAKQ--- 61 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg-------------------~~~~~~~~~~~~~---~~~~--- 61 (396)
.+||+|||||++|+++|..|+++|++|+|||+.+.... .|........... ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 57999999999999999999999999999998764431 1110000000000 0000
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEE
Q 016069 62 FCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~v 141 (396)
.+.+..............+..+...|.+.+.+.++++ +++++|++++.++ +.+.|++.... |. .++++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~--G~---~~~~a~~v 199 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPS--GP---YPVRARYG 199 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETT--EE---EEEEESEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCC--Cc---EEEEeCEE
Confidence 0000000111111234678899999998888888766 9999999998765 56777774321 11 47999999
Q ss_pred EEeecCCC
Q 016069 142 VVASGETS 149 (396)
Q Consensus 142 viAtG~~s 149 (396)
|.|+|.+|
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999766
No 107
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.21 E-value=1.6e-11 Score=118.36 Aligned_cols=139 Identities=17% Similarity=0.132 Sum_probs=87.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeecc-ccccc-cCCCCCCCCCCCCCCCHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHL-AKQFC-QLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (396)
..+||+|||||++|+++|..|++.|++|+|||+.+..|+....+..+...-.. ..... ....+.. ......+..++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCT--GTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTC--TTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccc--cccccCCHHHH
Confidence 36899999999999999999999999999999988766431111111000000 00000 0000000 00112456788
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcC-CCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDE-ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p 151 (396)
.+.+.+.+++.++.+ +++++|+++..++ +.+.|.|++.+... |+. .++++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~v~~~~~~~-g~~--~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEI--HWGVKFTGLQPPPRKGSGWRAQLQPNPP-AQL--ASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEE--EESCEEEEEECCCSTTCCBEEEEESCCC-HHH--HTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEecCCCCEEEEEEEECCC-CCE--EEEEcCEEEECCCCCccc
Confidence 888888888888766 9999999998742 23467787742100 111 368999999999965544
No 108
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.21 E-value=9e-11 Score=113.16 Aligned_cols=136 Identities=21% Similarity=0.201 Sum_probs=88.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc--------------CCcCceeeccccccccCCC--C
Q 016069 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQLPH--L 68 (396)
Q Consensus 5 ~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~~~~~~~~~~~~--~ 68 (396)
...+||+|||||++|+++|..|+++|++|+|+|+.+..+..-+. ...+.+.-..+.....+.. +
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 34689999999999999999999999999999987654321000 0000000000000000000 0
Q ss_pred C---CCCC--CCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEE
Q 016069 69 P---FPSS--YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (396)
Q Consensus 69 ~---~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vvi 143 (396)
. .... .....++..+.+.|.+.+.+.++++ +++++|++++.++ +.+++++.++. |. .++++|+||.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVg 159 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADI--RRGHEVLSLTDDG--AGVTVEVRGPE--GK---HTLRAAYLVG 159 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEE--EETCEEEEEEEET--TEEEEEEEETT--EE---EEEEESEEEE
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEE--ECCcEEEEEEEcC--CeEEEEEEcCC--CC---EEEEeCEEEE
Confidence 0 0000 1123467788899998888888766 9999999998876 56778877652 11 5799999999
Q ss_pred eecCCC
Q 016069 144 ASGETS 149 (396)
Q Consensus 144 AtG~~s 149 (396)
|+|.+|
T Consensus 160 ADG~~S 165 (500)
T 2qa1_A 160 CDGGRS 165 (500)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999876
No 109
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.20 E-value=3e-11 Score=113.68 Aligned_cols=131 Identities=22% Similarity=0.269 Sum_probs=84.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc------c-------------cc-----cCCcCceeeccc--
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------I-------------WK-----KYSYDRLRLHLA-- 59 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg------~-------------~~-----~~~~~~~~~~~~-- 59 (396)
.++||+|||||++|+++|..|+++|++|+|+|+.+.... . |. ......+.....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 368999999999999999999999999999999875421 0 00 001111111111
Q ss_pred -cccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE
Q 016069 60 -KQFCQLPHLPFP---SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (396)
Q Consensus 60 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~ 135 (396)
.....+...... .......++..+.+.|.+.+.+ .. ++++++|++++.++ +.+.+++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~--i~~~~~v~~i~~~~--~~v~v~~~~g--------~~ 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DS--VQFGKRVTRCEEDA--DGVTVWFTDG--------SS 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GG--EEESCCEEEEEEET--TEEEEEETTS--------CE
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CE--EEECCEEEEEEecC--CcEEEEEcCC--------CE
Confidence 001111000000 0111235677888888877765 34 49999999999876 6788888775 67
Q ss_pred EEeCEEEEeecCCCC
Q 016069 136 YSGRFLVVASGETSN 150 (396)
Q Consensus 136 ~~~d~vviAtG~~s~ 150 (396)
+++|+||.|+|.+|.
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 999999999997653
No 110
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.19 E-value=2.7e-11 Score=111.25 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=82.8
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCcccccCC---cCceeeccccccccCCC--------------
Q 016069 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPH-------------- 67 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~---~g~~v~lie~~~~~gg~~~~~~---~~~~~~~~~~~~~~~~~-------------- 67 (396)
+||+|||||++|+++|+.|++ .|++|+|+|+.+..||.+.... +.....+....++....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 599999999999999999999 8999999999998888654321 11222221111110000
Q ss_pred ---C--CCC---------CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceee
Q 016069 68 ---L--PFP---------SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIE 133 (396)
Q Consensus 68 ---~--~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~ 133 (396)
. ++. .....+.....+..+.+..+++.+.++ ++++.|++++.++ +.|+|++.++
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i--~~~~~V~~i~~~~--~~~~v~~~~g-------- 149 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEV--YFRHRVTQINLRD--DKWEVSKQTG-------- 149 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEESSS--------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEE--EeCCEEEEEEEcC--CEEEEEECCC--------
Confidence 0 000 000112222233445555555556655 9999999999865 6798988765
Q ss_pred EEEEeCEEEEeecC
Q 016069 134 EYYSGRFLVVASGE 147 (396)
Q Consensus 134 ~~~~~d~vviAtG~ 147 (396)
..+++|.||+|+..
T Consensus 150 ~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 SPEQFDLIVLTMPV 163 (342)
T ss_dssp CCEEESEEEECSCH
T ss_pred CEEEcCEEEECCCH
Confidence 45799999999984
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.19 E-value=1.8e-10 Score=105.38 Aligned_cols=130 Identities=14% Similarity=0.214 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeecccccccc----------------------
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQ---------------------- 64 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~---------------------- 64 (396)
++||+|||||++|+++|..|++.|++|+|+|+.+..||.+..........+.....+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 3799999999999999999999999999999998887755432222111111000000
Q ss_pred ------CCC--CC-CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE
Q 016069 65 ------LPH--LP-FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (396)
Q Consensus 65 ------~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~ 135 (396)
... +. .......+.....+....+..++ ++++ +++++|++++.++ +.|.|++.++ . ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i--~~~~~v~~i~~~~--~~~~v~~~~g----~---~~ 148 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPV--SFSCRITEVFRGE--EHWNLLDAEG----Q---NH 148 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCE--ECSCCEEEEEECS--SCEEEEETTS----C---EE
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcE--EecCEEEEEEEeC--CEEEEEeCCC----c---Cc
Confidence 000 00 00000111111122223332222 5555 9999999999876 6788887765 1 33
Q ss_pred EEeCEEEEeecCCC
Q 016069 136 YSGRFLVVASGETS 149 (396)
Q Consensus 136 ~~~d~vviAtG~~s 149 (396)
.++|+||+|+|..+
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 45999999999754
No 112
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.19 E-value=1.1e-10 Score=109.52 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=81.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC-----CcccccCCcCce---------------------eeccc-
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY-----ASIWKKYSYDRL---------------------RLHLA- 59 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~-----gg~~~~~~~~~~---------------------~~~~~- 59 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. |+.+........ .....
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 579999999999999999999999999999987643 322221100000 00000
Q ss_pred -cccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEE
Q 016069 60 -KQFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYS 137 (396)
Q Consensus 60 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~ 137 (396)
..+.... .+.. ........+..+.++|.+.+.. . .++++++|++++.++ +.|.|++.++ .+++
T Consensus 106 g~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ 170 (398)
T 2xdo_A 106 GNILSTKN-VKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK--KKWTLTFENK--------PSET 170 (398)
T ss_dssp SEEEEECC-CGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS--SSEEEEETTS--------CCEE
T ss_pred CCchhhcc-ccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC--CEEEEEECCC--------cEEe
Confidence 0000000 0000 0001134667777777664432 2 349999999998875 5688888765 5689
Q ss_pred eCEEEEeecCCCCC
Q 016069 138 GRFLVVASGETSNP 151 (396)
Q Consensus 138 ~d~vviAtG~~s~p 151 (396)
+|+||.|+|.+|..
T Consensus 171 ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 171 ADLVILANGGMSKV 184 (398)
T ss_dssp ESEEEECSCTTCSC
T ss_pred cCEEEECCCcchhH
Confidence 99999999976643
No 113
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.18 E-value=8.7e-11 Score=113.82 Aligned_cols=141 Identities=22% Similarity=0.297 Sum_probs=85.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC----CCCcccccC----------CcC-----cee------
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN----CYASIWKKY----------SYD-----RLR------ 55 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~----~~gg~~~~~----------~~~-----~~~------ 55 (396)
|+.....+||+|||||++|+++|..|+++|++|+|+|+.+ ..|..+... ..+ ...
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 5544445899999999999999999999999999999986 222211100 000 000
Q ss_pred eccccc----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCce-EEEEeecCCCC
Q 016069 56 LHLAKQ----FCQLPHLPF-PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPG 129 (396)
Q Consensus 56 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~g 129 (396)
...... .+.+...+. .........+..+...|.+.+.+.++++ +++++|+++..++ +.. .|.+.... |
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~~~~V~~v~~~~--~~v~gv~~~~~d--G 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV--RERHEVIDVLFEG--ERAVGVRYRNTE--G 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEET--TEEEEEEEECSS--S
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEEC--CEEEEEEEEeCC--C
Confidence 000000 000100000 0011123678899999998888888776 9999999998865 432 14433321 2
Q ss_pred ceeeEEEEeCEEEEeecCCC
Q 016069 130 RVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 130 ~~~~~~~~~d~vviAtG~~s 149 (396)
+. .++++|.||+|+|.+|
T Consensus 155 ~~--~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 155 VE--LMAHARFIVDASGNRT 172 (512)
T ss_dssp CE--EEEEEEEEEECCCTTC
T ss_pred CE--EEEEcCEEEECCCcch
Confidence 21 5799999999999765
No 114
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.18 E-value=1.4e-10 Score=111.88 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=88.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc--------------CCcCceee--ccccc-c----cc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRL--HLAKQ-F----CQ 64 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--------------~~~~~~~~--~~~~~-~----~~ 64 (396)
..+||+|||||++|+++|..|+++|++|+|+|+.+..+...+. ...+.+.- ..... + ..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3689999999999999999999999999999987644321000 00000000 00000 0 00
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEe
Q 016069 65 LPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVA 144 (396)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviA 144 (396)
+.............++..+.+.|.+.+.+.++++ +++++|++++.++ +.+++++.++. |. .++++|+||.|
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVgA 161 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAEL--LRGHTVRALTDEG--DHVVVEVEGPD--GP---RSLTTRYVVGC 161 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEE--EESCEEEEEEECS--SCEEEEEECSS--CE---EEEEEEEEEEC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCC--Cc---EEEEeCEEEEc
Confidence 0000000001123467888999998888888766 9999999998876 56778877652 22 57999999999
Q ss_pred ecCCC
Q 016069 145 SGETS 149 (396)
Q Consensus 145 tG~~s 149 (396)
+|.+|
T Consensus 162 DG~~S 166 (499)
T 2qa2_A 162 DGGRS 166 (499)
T ss_dssp CCTTC
T ss_pred cCccc
Confidence 99876
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.18 E-value=2.5e-10 Score=111.27 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=88.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC------------------------CcCc---e---ee
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYDR---L---RL 56 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~------------------------~~~~---~---~~ 56 (396)
++||+|||||++|+++|..|+++|++|+|+|+.+..+..-+.. .... + ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 5899999999999999999999999999999986443110000 0000 0 00
Q ss_pred cc--ccccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCC----ceEEE
Q 016069 57 HL--AKQFC----QLPH-----LPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATN----MWNVK 121 (396)
Q Consensus 57 ~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~----~~~v~ 121 (396)
.. ...+. .+.. ...........++..+...|.+.+.+.++++ +++++|+++..++ + .++++
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~~~v~v~ 160 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAI--RFGTRLLSFRQHD--DDAGAGVTAR 160 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEEC--GGGCSEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEECC--CCccccEEEE
Confidence 00 00000 0000 0000011224678899999999898888766 9999999998876 4 67777
Q ss_pred EeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 122 ASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 122 ~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
+.++.+ . .++++|+||.|+|.+|
T Consensus 161 ~~~~~~--~---~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 161 LAGPDG--E---YDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEETTE--E---EEEEEEEEEECCCTTC
T ss_pred EEcCCC--e---EEEEeCEEEECCCCcc
Confidence 776421 1 6799999999999766
No 116
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.16 E-value=2.9e-10 Score=111.58 Aligned_cols=140 Identities=15% Similarity=0.219 Sum_probs=86.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhc------CCCeEEEecCCCCCccc-ccC-----------------CcCc--------e
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENCYASIW-KKY-----------------SYDR--------L 54 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~------g~~v~lie~~~~~gg~~-~~~-----------------~~~~--------~ 54 (396)
.+||+|||||++|+++|..|++. |++|+|+|+.+..|+.. ... ..+- +
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 48999999999999999999998 99999999987665421 100 0000 0
Q ss_pred eeccccccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeec---CCC
Q 016069 55 RLHLAKQFCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNL---LSP 128 (396)
Q Consensus 55 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~---~~~ 128 (396)
..........++..+ .........++..+.++|.+.+++.++++ ++++.|+++..++++....|.+.+. ..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~- 191 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEV--YPGYAAAEILFHEDGSVKGIATNDVGIQKD- 191 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEEECTTSSEEEEEECCEEECTT-
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcCCCCEEEEEeCCccccCC-
Confidence 000000001111001 00011123577899999999888888776 9999999998765222223666530 00
Q ss_pred Cce-----eeEEEEeCEEEEeecCCC
Q 016069 129 GRV-----IEEYYSGRFLVVASGETS 149 (396)
Q Consensus 129 g~~-----~~~~~~~d~vviAtG~~s 149 (396)
|+. .+.++++|+||+|+|.++
T Consensus 192 G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 192 GAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp SCEEEEEECCCEEECSEEEECCCTTC
T ss_pred CCcccccCCceEEECCEEEEeeCCCc
Confidence 110 004799999999999765
No 117
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.16 E-value=1.7e-10 Score=109.64 Aligned_cols=62 Identities=6% Similarity=0.075 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeece---EEEEEEEcCCCCceE-EEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~---~v~~i~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~ 152 (396)
....+...+.+.+++.|+++ ++++ +|+++..++ +.+. |.+.++ .++++|.||+|+|.++...
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i--~~~t~~~~V~~i~~~~--~~v~gV~t~~G--------~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKF--VTGTPQGRVVTLIFEN--NDVKGAVTADG--------KIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESTTTTCEEEEEEET--TEEEEEEETTT--------EEEECSEEEECCGGGGGGT
T ss_pred cHHHHHHHHHHHHHhcCCEE--EeCCcCceEEEEEecC--CeEEEEEECCC--------CEEECCEEEECCCCChhhh
Confidence 34678888888888888776 8998 999998865 6676 777764 6899999999999876443
No 118
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.16 E-value=9.3e-11 Score=113.87 Aligned_cols=168 Identities=12% Similarity=0.070 Sum_probs=104.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCcccccCCcCceeec-----------ccc--------ccccCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLH-----------LAK--------QFCQLP 66 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~~-----------~~~--------~~~~~~ 66 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.. .+|... +.+..... ... ....+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~---Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS---CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC---SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC---ccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 5899999999999999999999999999999874 333210 00000000 000 000000
Q ss_pred ---CCCCCC-C-CCCCCCHHHHHHHHHHHHHh-cCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCE
Q 016069 67 ---HLPFPS-S-YPMFVSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (396)
Q Consensus 67 ---~~~~~~-~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~ 140 (396)
....+. + .....++..+...+.+.+++ .+++ .+++.|+++..++ +..+.|.+.++ ..+.+|.
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe---I~~~~Vt~L~~e~-g~V~GV~t~dG--------~~i~Ada 171 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLY---IKQEEVVDIIVKN-NQVVGVRTNLG--------VEYKTKA 171 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE---EEESCEEEEEESS-SBEEEEEETTS--------CEEECSE
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCE---EEEeEEEEEEecC-CEEEEEEECCC--------cEEEeCE
Confidence 000000 0 00123566788888888877 3655 3578999998754 23345777654 5799999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEe
Q 016069 141 LVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (396)
Q Consensus 141 vviAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r 217 (396)
||+|||. .+..+.++|...+ . ..+ +| +.++++++..|.+.|.++..+.+
T Consensus 172 VVLATG~--~s~~~~~~G~~~~------~----------------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 172 VVVTTGT--FLNGVIYIGDKMI------P----------------GGR---LG-EPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEECCTT--CBTCEEEETTEEE------E----------------CSB---TT-BCCBCTHHHHHHHTTCCCEEEEE
T ss_pred EEEccCC--CccCceeccceec------C----------------CCC---CC-chhHHHHHHHHHhcCCceEEecC
Confidence 9999995 4444444454433 1 112 23 56789999999999999887765
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.14 E-value=1.1e-10 Score=108.87 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc------------------------CCcCceeeccc-cc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK------------------------YSYDRLRLHLA-KQ 61 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~------------------------~~~~~~~~~~~-~~ 61 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.+..++.-.. .....+..... ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 579999999999999999999999999999998755421000 00001111000 00
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEE
Q 016069 62 FCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~v 141 (396)
+..+. .........++..+.+.+.+.+.+.++++ +++++|++++. + + .|++.++ .++++|+|
T Consensus 91 ~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~-~--~--~v~~~~g--------~~~~ad~v 152 (379)
T 3alj_A 91 VSKET---FNGLPWRIMTRSHLHDALVNRARALGVDI--SVNSEAVAADP-V--G--RLTLQTG--------EVLEADLI 152 (379)
T ss_dssp EEEEC---GGGCCEEEEEHHHHHHHHHHHHHHTTCEE--ESSCCEEEEET-T--T--EEEETTS--------CEEECSEE
T ss_pred eeecc---CCCCceEEECHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEe-C--C--EEEECCC--------CEEEcCEE
Confidence 00000 00000123567889999988888877766 99999999976 2 3 5777664 57999999
Q ss_pred EEeecCCC
Q 016069 142 VVASGETS 149 (396)
Q Consensus 142 viAtG~~s 149 (396)
|+|+|..|
T Consensus 153 V~AdG~~s 160 (379)
T 3alj_A 153 VGADGVGS 160 (379)
T ss_dssp EECCCTTC
T ss_pred EECCCccH
Confidence 99999654
No 120
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.13 E-value=3e-10 Score=105.10 Aligned_cols=62 Identities=8% Similarity=0.016 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
....+...+.+.+++.|+++ +++++|+++..++ ++.|.|.+.+++. .++++|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g~~------~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGAEP------MTLSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTTSC------EEEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCCce------eEEEeCEEEECCCcch
Confidence 45678888888888888776 8899999999865 2447888876533 6899999999999865
No 121
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1.2e-10 Score=109.17 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=85.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc------c-------------ccc-----CCcCceeeccc-c-
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------I-------------WKK-----YSYDRLRLHLA-K- 60 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg------~-------------~~~-----~~~~~~~~~~~-~- 60 (396)
++||+|||||++|+++|..|+++|++|+|+|+.+.... . |.. .....+..... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 48999999999999999999999999999998764410 0 000 00000111000 0
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhc-CCcceeeeceEEEEEEEcCCCCce--EEEEeecCCCCceeeEEE
Q 016069 61 QFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMW--NVKASNLLSPGRVIEEYY 136 (396)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~--~v~~~~~~~~g~~~~~~~ 136 (396)
....+...... ........+..+.+.+.+.+.+. ++++ +++++|++++.++ +.+ .|++.++ .++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~g~v~~~~g--------~~~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEM--LFETRIEAVQRDE--RHAIDQVRLNDG--------RVL 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEE--ECSCCEEEEEECT--TSCEEEEEETTS--------CEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEE--EcCCEEEEEEEcC--CceEEEEEECCC--------CEE
Confidence 00011100000 00112367889999998888876 6665 9999999998865 556 7877664 579
Q ss_pred EeCEEEEeecCCC
Q 016069 137 SGRFLVVASGETS 149 (396)
Q Consensus 137 ~~d~vviAtG~~s 149 (396)
++|.||+|+|.+|
T Consensus 154 ~ad~vV~AdG~~s 166 (399)
T 2x3n_A 154 RPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999765
No 122
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.13 E-value=8.5e-11 Score=111.91 Aligned_cols=134 Identities=19% Similarity=0.294 Sum_probs=86.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC--C---cC------ceeeccc--cc-----cccC---
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--S---YD------RLRLHLA--KQ-----FCQL--- 65 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--~---~~------~~~~~~~--~~-----~~~~--- 65 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..|+..... . +. .+....+ .. +..+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 5899999999999999999999999999999988666421100 0 00 0000000 00 0000
Q ss_pred --------CCCCCC--C---CCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCcee
Q 016069 66 --------PHLPFP--S---SYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVI 132 (396)
Q Consensus 66 --------~~~~~~--~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~ 132 (396)
...++. . .++.......+.+.+.+.+++.++++ +++++|+++..++ +..|.|.+.++
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i--~~~~~V~~i~~~~-~~v~~V~~~~G------- 175 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI--RTNTPVETIEYEN-GQTKAVILQTG------- 175 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTC-------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE--EeCcEEEEEEecC-CcEEEEEECCC-------
Confidence 000000 0 00111145778888888888888776 9999999998754 23377887654
Q ss_pred eEEEEeCEEEEeecCCCCC
Q 016069 133 EEYYSGRFLVVASGETSNP 151 (396)
Q Consensus 133 ~~~~~~d~vviAtG~~s~p 151 (396)
..+++|.||+|+|.++.|
T Consensus 176 -~~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 -EVLETNHVVIAVGGKSVP 193 (447)
T ss_dssp -CEEECSCEEECCCCSSSG
T ss_pred -CEEECCEEEECCCCCcCC
Confidence 469999999999987644
No 123
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.12 E-value=7.6e-10 Score=109.95 Aligned_cols=141 Identities=19% Similarity=0.244 Sum_probs=88.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCCCCcccccC------------------------CcCceeeccc-
Q 016069 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCYASIWKKY------------------------SYDRLRLHLA- 59 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie~~~~~gg~~~~~------------------------~~~~~~~~~~- 59 (396)
..+||+|||||++|+++|..|++ .|++|+|+|+.+..+...+.. .........+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 35799999999999999999999 999999999876443211100 0001111100
Q ss_pred ----ccccc---CCCC--CCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCC--CCceEEEEeec---
Q 016069 60 ----KQFCQ---LPHL--PFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNL--- 125 (396)
Q Consensus 60 ----~~~~~---~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~--- 125 (396)
..+.. +... ..........++..+.+.|.+.+.+.+..+.++++++|+++..+++ ...+.+++.+.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 00000 0000 0000011235778999999999998876223399999999987642 12577776640
Q ss_pred CCCCceeeEEEEeCEEEEeecCCC
Q 016069 126 LSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 126 ~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.. |.. .++++|+||.|+|.+|
T Consensus 191 ~~-G~~--~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 191 HA-GQI--ETVQARYVVGCDGARS 211 (639)
T ss_dssp GT-TCE--EEEEEEEEEECCCTTC
T ss_pred CC-CCe--EEEEeCEEEECCCcch
Confidence 01 222 6799999999999876
No 124
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.11 E-value=4.3e-10 Score=110.23 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=86.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc------------------cccc---CCc---Cceeeccccc-
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------------------IWKK---YSY---DRLRLHLAKQ- 61 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg------------------~~~~---~~~---~~~~~~~~~~- 61 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.+..+. .|.. ..+ ..........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 58999999999999999999999999999998753221 0000 000 0000000000
Q ss_pred ---cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE
Q 016069 62 ---FCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (396)
Q Consensus 62 ---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~ 135 (396)
.+.+.... +.........+..+...+.+.+.+.|+.+ +++++|+++..++ ++.+.|++.++ |+. .+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~---G~~--~~ 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRG---GES--VT 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEET---TEE--EE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecC---Cce--EE
Confidence 00010000 00011123578899999998888888776 8999999998753 35677887742 222 57
Q ss_pred EEeCEEEEeecCCC
Q 016069 136 YSGRFLVVASGETS 149 (396)
Q Consensus 136 ~~~d~vviAtG~~s 149 (396)
+++|.||.|+|..|
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999754
No 125
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.10 E-value=7e-10 Score=108.30 Aligned_cols=133 Identities=17% Similarity=0.259 Sum_probs=85.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc----------------------CCcCc------eeecc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK----------------------YSYDR------LRLHL 58 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~----------------------~~~~~------~~~~~ 58 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.+..+...+. ...+. .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 479999999999999999999999999999998755421110 00000 00100
Q ss_pred --ccccccCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCC
Q 016069 59 --AKQFCQLPHLPF--------PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (396)
Q Consensus 59 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~ 128 (396)
...+..+..... ........++..+.++|.+.+.+. ++++++|+++..++ +.+++++.+..+
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~--~~v~v~~~~~~~- 177 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD--DHVRATITDLRT- 177 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--SCEEEEEEETTT-
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--CEEEEEEEECCC-
Confidence 001111110000 000112356778888888877765 49999999998875 567787776221
Q ss_pred CceeeEEEEeCEEEEeecCCC
Q 016069 129 GRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 129 g~~~~~~~~~d~vviAtG~~s 149 (396)
|+. .++++|+||.|+|.+|
T Consensus 178 G~~--~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 178 GAT--RAVHARYLVACDGASS 196 (549)
T ss_dssp CCE--EEEEEEEEEECCCTTC
T ss_pred CCE--EEEEeCEEEECCCCCc
Confidence 222 5799999999999866
No 126
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.09 E-value=1.9e-10 Score=107.73 Aligned_cols=135 Identities=17% Similarity=0.105 Sum_probs=83.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC------C-c-cccc--------C----------CcCceeeccccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------Y----------SYDRLRLHLAKQ 61 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~------g-g-~~~~--------~----------~~~~~~~~~~~~ 61 (396)
+||+|||||++|+++|..|++.|++|+|+|+.+.. + + .+.. . ....+.......
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999987631 1 1 1100 0 011111111100
Q ss_pred cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEE-eecCCCCceeeEEEEeC
Q 016069 62 FCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGR 139 (396)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~g~~~~~~~~~d 139 (396)
...+...... ........+..+.+.+.+.+.+.++.+ +++++|+++..++ ++.+.|++ .++ +. .++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~~g----~~--~~~~a~ 153 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATT--VYQAAEVRLHDLQ-GERPYVTFERDG----ER--LRLDCD 153 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEECTT-SSSCEEEEEETT----EE--EEEECS
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeE--EeceeEEEEEEec-CCceEEEEecCC----cE--EEEEeC
Confidence 0000000000 001112356778888877777777666 9999999998653 24566776 443 21 379999
Q ss_pred EEEEeecCCCCC
Q 016069 140 FLVVASGETSNP 151 (396)
Q Consensus 140 ~vviAtG~~s~p 151 (396)
+||.|+|.+|..
T Consensus 154 ~vV~AdG~~S~v 165 (394)
T 1k0i_A 154 YIAGCDGFHGIS 165 (394)
T ss_dssp EEEECCCTTCST
T ss_pred EEEECCCCCcHH
Confidence 999999976643
No 127
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.08 E-value=1.4e-10 Score=112.98 Aligned_cols=172 Identities=16% Similarity=0.127 Sum_probs=102.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCcccccCC---------------cCceee---cccccccc-C
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYS---------------YDRLRL---HLAKQFCQ-L 65 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~-~~gg~~~~~~---------------~~~~~~---~~~~~~~~-~ 65 (396)
..+||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+.... ..+... +.....+. +
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 35899999999999999999999999999999874 3443221100 000000 00000000 0
Q ss_pred CCCCCCCC--CCCCCCHHHHHHHHHHHHHhc-CCcceeeeceEEEEEEEcCCCCceE-EEEeecCCCCceeeEEEEeCEE
Q 016069 66 PHLPFPSS--YPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (396)
Q Consensus 66 ~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~d~v 141 (396)
.....+.. .....++..+...+.+.+++. ++++ ++..|+++..++ +.+. |.+.++ ..+.+|.|
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I---~~~~V~~L~~d~--g~V~GV~t~~G--------~~i~Ad~V 166 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL---LQDTVIGVSANS--GKFSSVTVRSG--------RAIQAKAA 166 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEEET--TEEEEEEETTS--------CEEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE---EeeEEEEEEecC--CEEEEEEECCC--------cEEEeCEE
Confidence 00000000 001245667888888877774 6653 566898887754 4443 666654 57999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeeccCCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEe
Q 016069 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (396)
Q Consensus 142 viAtG~~s~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r 217 (396)
|+|||.++ +.+.+.|...+ . ..++ + |+.++++++..|.+.|.+|..+..
T Consensus 167 VLATG~~s--~~~i~~G~~~~------~----------------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 167 ILACGTFL--NGLIHIGMDHF------P----------------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EECCTTCB--TCEEEETTEEE------E----------------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred EECcCCCC--Cccceeeeeee------c----------------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 99999543 22222222211 0 0111 1 357788999999999999877644
No 128
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.08 E-value=6.5e-10 Score=104.16 Aligned_cols=129 Identities=15% Similarity=0.051 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC----Cc-cccc----------CCcCceeeccccc---cccC-CC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY----AS-IWKK----------YSYDRLRLHLAKQ---FCQL-PH 67 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~----gg-~~~~----------~~~~~~~~~~~~~---~~~~-~~ 67 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. |+ .... ...+ .....+.. +... ..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCCC
Confidence 589999999999999999999999999999987643 11 1000 0000 00000000 0000 00
Q ss_pred CCCC--CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEee
Q 016069 68 LPFP--SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVAS 145 (396)
Q Consensus 68 ~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAt 145 (396)
.... ........+..+.+.+.+.+ .++.+ +++++|+++..++ +.+.|++.++ .++++|+||.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ad~vV~Ad 149 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERY--HTSKCLVGLSQDS--ETVQMRFSDG--------TKAEANWVIGAD 149 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTE--ETTCCEEEEEECS--SCEEEEETTS--------CEEEESEEEECC
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEE--EcCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECC
Confidence 0000 00001234566777776554 35555 9999999998865 6688888765 579999999999
Q ss_pred cCCCC
Q 016069 146 GETSN 150 (396)
Q Consensus 146 G~~s~ 150 (396)
|..|.
T Consensus 150 G~~S~ 154 (397)
T 2vou_A 150 GGASV 154 (397)
T ss_dssp CTTCH
T ss_pred Ccchh
Confidence 97653
No 129
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.08 E-value=3.7e-10 Score=109.12 Aligned_cols=132 Identities=20% Similarity=0.331 Sum_probs=82.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC-------cccccCCcCc-eeecc---------cccccc-CC--
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR-LRLHL---------AKQFCQ-LP-- 66 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~g-------g~~~~~~~~~-~~~~~---------~~~~~~-~~-- 66 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+ +.|....... ..... ...++. +.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987552 2232211000 00000 000000 00
Q ss_pred ------------CCCCCC-----CCCCC--CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCC
Q 016069 67 ------------HLPFPS-----SYPMF--VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (396)
Q Consensus 67 ------------~~~~~~-----~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~ 127 (396)
.+..+. ..+.. .....+.+.+.+.+++.++++ +++++|+++..++ +..+.|++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 000000 00000 112567777777788888776 9999999998765 23455777665
Q ss_pred CCceeeEEEEeCEEEEeecCCC
Q 016069 128 PGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 128 ~g~~~~~~~~~d~vviAtG~~s 149 (396)
.++.+|.||+|+|.++
T Consensus 262 ------~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ------EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ------CEEECSCEEECCCTTC
T ss_pred ------CEEECCEEEECCCCCh
Confidence 6799999999999754
No 130
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.07 E-value=1.8e-09 Score=101.64 Aligned_cols=136 Identities=21% Similarity=0.176 Sum_probs=84.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCCCCCccccc--------------CC----------cCceeeccc--
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILERENCYASIWKK--------------YS----------YDRLRLHLA-- 59 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~-v~lie~~~~~gg~~~~--------------~~----------~~~~~~~~~-- 59 (396)
.+||+|||||++|+++|..|++.|++ |+|+|+.+..+..... .. ...+.....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 58999999999999999999999999 9999997754321100 00 000000000
Q ss_pred cccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHh-cC-CcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE
Q 016069 60 KQFCQLPHL-PFPSSYP-MFVSRAQFIEYLDHYVSH-FN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (396)
Q Consensus 60 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~ 135 (396)
......... ......+ ..+.+..+.++|.+.+.+ .+ ..+ +++++|++++. + +.+.+++.+..+ |+. .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v--~~~~~v~~i~~-~--~~v~v~~~~~~~-g~~--~~ 155 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAV--RTGLGVERIEE-R--DGRVLIGARDGH-GKP--QA 155 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSE--EESEEEEEEEE-E--TTEEEEEEEETT-SCE--EE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEE--EECCEEEEEec-C--CccEEEEecCCC-CCc--eE
Confidence 000000000 0000011 235677888888887765 35 345 99999999987 4 457777765211 121 57
Q ss_pred EEeCEEEEeecCCCC
Q 016069 136 YSGRFLVVASGETSN 150 (396)
Q Consensus 136 ~~~d~vviAtG~~s~ 150 (396)
+++|+||.|+|..|.
T Consensus 156 ~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 156 LGADVLVGADGIHSA 170 (410)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EecCEEEECCCccch
Confidence 999999999997663
No 131
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.06 E-value=6.3e-10 Score=103.64 Aligned_cols=60 Identities=17% Similarity=-0.000 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 77 FVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
......+...+.+.+++.++.+ +++++|+++..++ +.|.|.+.+ .++++|.||+|+|.++
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEI--FEHTPVLHVERDG--EALFIKTPS---------GDVWANHVVVASGVWS 219 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEE--ETTCCCCEEECSS--SSEEEEETT---------EEEEEEEEEECCGGGT
T ss_pred EEcHHHHHHHHHHHHHHCCCEE--EcCCcEEEEEEEC--CEEEEEcCC---------ceEEcCEEEECCChhH
Confidence 3456788888888888888766 8899999998765 566676643 5789999999999764
No 132
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.05 E-value=3.5e-10 Score=107.89 Aligned_cols=136 Identities=10% Similarity=0.057 Sum_probs=84.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC--CcccccC-----------CcCc----eeeccccccccCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY--ASIWKKY-----------SYDR----LRLHLAKQFCQLPHLP 69 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~--gg~~~~~-----------~~~~----~~~~~~~~~~~~~~~~ 69 (396)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. |..+... .... ............+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 489999999999999999999999999999997642 2221110 0000 0000000000000000
Q ss_pred --CC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceE-EEEeec-CCCCceeeEEEEeCEEEEe
Q 016069 70 --FP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNL-LSPGRVIEEYYSGRFLVVA 144 (396)
Q Consensus 70 --~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~-~~~g~~~~~~~~~d~vviA 144 (396)
.. .......++..+.+.+.+.+.+.++++ +++++|+++..++ +.+. |++.+. . |+. .++++|.||+|
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~~--G~~--~~~~ad~VV~A 157 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEI--WDLTTAMKPIFED--GYVKGAVLFNRRT--NEE--LTVYSKVVVEA 157 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET--TEEEEEEEEETTT--TEE--EEEECSEEEEC
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEE--EeCcEEEEEEEEC--CEEEEEEEEEcCC--Cce--EEEEcCEEEEC
Confidence 00 000123577888999988888888776 9999999998765 4433 555421 1 221 47999999999
Q ss_pred ecCCCC
Q 016069 145 SGETSN 150 (396)
Q Consensus 145 tG~~s~ 150 (396)
+|..+.
T Consensus 158 dG~~s~ 163 (453)
T 3atr_A 158 TGYSRS 163 (453)
T ss_dssp CGGGCT
T ss_pred cCCchh
Confidence 997553
No 133
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.05 E-value=1.5e-09 Score=96.79 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCc-ccccC-CcCceeecccc-ccccCCCCCCCCCCCC--CCCH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAK-QFCQLPHLPFPSSYPM--FVSR 80 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~~~gg-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 80 (396)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+..|+ .|... ....+....+. .++.-...++...... ....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 999999999887765 44321 11221111000 0000001111000000 1145
Q ss_pred HHHHHHHHHHHHh-cCCcceeeeceEEEEEEEcCCCCc-eEEEEee---------cCCCCceeeEEEEeCEEEEeecC
Q 016069 81 AQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNM-WNVKASN---------LLSPGRVIEEYYSGRFLVVASGE 147 (396)
Q Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~-~~v~~~~---------~~~~g~~~~~~~~~d~vviAtG~ 147 (396)
.++...+.+.+.+ .++++ +++++|+++..++ +. ..+.+.. +.. ++. ..+++|.||+|+|.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i--~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~-g~~--~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL--FNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSC-MDP--NVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE--EETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSC-CCC--EEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEE--EcCcEEEEEEecC--CeEEEEEEeccccccccCcccc-Cce--EEEECCEEEECCCC
Confidence 6666666665554 56655 9999999998764 33 2344431 100 122 67999999999994
No 134
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.05 E-value=7.2e-10 Score=104.15 Aligned_cols=128 Identities=21% Similarity=0.248 Sum_probs=74.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcc-----c--ccC---------CcC--------------ceee-
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI-----W--KKY---------SYD--------------RLRL- 56 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~-----~--~~~---------~~~--------------~~~~- 56 (396)
++|+||||||+|+++|..|+++|++|+|+|+.+..... . ..+ ... ....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 68999999999999999999999999999987643210 0 000 000 0000
Q ss_pred ccccccccCCCC--CCCCCCC----CCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCc
Q 016069 57 HLAKQFCQLPHL--PFPSSYP----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (396)
Q Consensus 57 ~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~ 130 (396)
+........... +...... ..+.+..+.+.|.+ ..+ ..++++++|++++..+ ++.+++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~~~--~~v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---GLA--NTIQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHT---TCT--TTEECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHh---hcc--ceEEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 000000000000 0000000 01234455444432 223 3459999999998765 35677888876
Q ss_pred eeeEEEEeCEEEEeecCCC
Q 016069 131 VIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 131 ~~~~~~~~d~vviAtG~~s 149 (396)
.++++|+||.|+|..|
T Consensus 151 ---~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 151 ---SHENVDVLVGADGSNS 166 (412)
T ss_dssp ---CEEEESEEEECCCTTC
T ss_pred ---CEEEeeEEEECCCCCc
Confidence 6789999999999766
No 135
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.04 E-value=9.6e-10 Score=101.99 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
...+...+.+.+.+.++.+ +.+++|+++..++ +.|.|++.+ .++++|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i--~~~~~V~~i~~~~--~~~~v~~~~---------g~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQ--LFNCPVTAIRHDD--DGVTIETAD---------GEYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CEEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEcC--CEEEEEECC---------CeEEcCEEEEcCCccHHhhcc
Confidence 4577778888888888776 8899999998865 457777654 459999999999987654433
No 136
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.02 E-value=3.1e-09 Score=104.27 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=85.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC--Cc----Ccee-----ecccccc-------------
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----DRLR-----LHLAKQF------------- 62 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--~~----~~~~-----~~~~~~~------------- 62 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..||..... .. .... .+.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5899999999999999999999999999999998777632211 00 0000 0000000
Q ss_pred -----------------ccCCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEE
Q 016069 63 -----------------CQLPHLPFP-------SSYP-------MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (396)
Q Consensus 63 -----------------~~~~~~~~~-------~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~ 111 (396)
+.-...++. ...+ .......+...|.+.+++.++++ +++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i--~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDL--RMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEeeEeEE
Confidence 000000000 0000 01235678888888888888776 99999999987
Q ss_pred cCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 112 ~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
++++..+.|...+.. |+. .++.+|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~--g~~--~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMY--KGY--YWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETT--TEE--EEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCC--CcE--EEEECCeEEEeCCCccc
Confidence 542233334444311 222 47899999999997653
No 137
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.01 E-value=1.3e-09 Score=109.11 Aligned_cols=60 Identities=13% Similarity=0.208 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
....+...+.+.+++.|+.+ +++++|+++..++ +.|.|.+.++ .++++|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQI--YYQYQLQNFSRKD--DCWLLNFAGD--------QQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeeeEEEEeC--CeEEEEECCC--------CEEECCEEEECCCcchh
Confidence 45677788888888888776 9999999999876 5688887664 56999999999998653
No 138
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.00 E-value=3.6e-09 Score=103.73 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=84.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc--CCc--------------Cceee------------cc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--YSY--------------DRLRL------------HL 58 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~--~~~--------------~~~~~------------~~ 58 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..||.... ... ..... ..
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 579999999999999999999999999999998877652211 000 00000 00
Q ss_pred cc--------------ccc--c--C------CCCCCCCCC---CCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEE
Q 016069 59 AK--------------QFC--Q--L------PHLPFPSSY---PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (396)
Q Consensus 59 ~~--------------~~~--~--~------~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~ 111 (396)
+. .+. . + .....+... ........+...|.+.+++.++++ +++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l~~ 278 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKLVV 278 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEEEE
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEE
Confidence 00 000 0 0 000000000 011346778888888888888776 99999999987
Q ss_pred cCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 112 ~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
++++..+.|.+.+.. |+. ..+++|.||+|||.++.
T Consensus 279 ~~~g~v~Gv~~~~~~--g~~--~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 279 NDDHSVVGAVVHGKH--TGY--YMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CTTSBEEEEEEEETT--TEE--EEEEEEEEEECCCCCTT
T ss_pred CCCCcEEEEEEEeCC--CcE--EEEEcCEEEEecCCccc
Confidence 531232334444211 221 47899999999997654
No 139
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.99 E-value=1.8e-09 Score=100.47 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceE-EEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.....+...+.+.+++.++++ +.+++|+++..++ +.+. |.+.+ .++++|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~v~gv~~~~---------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKL--LEYTEVKGFLIEN--NEIKGVKTNK---------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCceEEEEEEEC--CEEEEEEECC---------cEEECCEEEECcchhH
Confidence 356677888888888888776 8999999998865 5666 66644 5699999999999764
No 140
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=4.6e-09 Score=105.36 Aligned_cols=60 Identities=10% Similarity=0.172 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeE-EEEeCEEEEeecCCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSN 150 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~-~~~~d~vviAtG~~s~ 150 (396)
....+...+.+.+++.|+.+ +++++|+++..++ +.|.|.+.++ . ++++|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTC--HYQHELQRLKRID--SQWQLTFGQS--------QAAKHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEECS--SSEEEEEC-C--------CCCEEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeEeEEEEeC--CeEEEEeCCC--------cEEEECCEEEECCCcchh
Confidence 44677777888888888776 9999999999876 5688888764 4 6899999999998754
No 141
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.97 E-value=6.9e-10 Score=100.17 Aligned_cols=105 Identities=21% Similarity=0.282 Sum_probs=63.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCC-cccccCC-cCceeecccc-ccccCCCCCCCC--CCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYA-SIWKKYS-YDRLRLHLAK-QFCQLPHLPFPS--SYPMFVS 79 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~g-g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 79 (396)
.+||+|||||++|+++|..|+++ |.+|+|+|+....| +.|.... +....+.... .+..-...++.. .+....+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 58999999999999999999997 99999999987665 4564322 2222222110 000000011100 0111123
Q ss_pred HHHHHHHHHHHHHh-cCCcceeeeceEEEEEEEcC
Q 016069 80 RAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDE 113 (396)
Q Consensus 80 ~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~i~~~~ 113 (396)
..++.+.+.+.+.+ .++.+ +.++.|+++..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i--~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKL--FNATTVEDLITRK 191 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEE--EETEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEE--EeCCEEEEEEecC
Confidence 45666777666666 36555 8999998887654
No 142
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.97 E-value=4.1e-09 Score=98.28 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
....+...+.+.+++.|+.+ +.+++|+++..++ +.|.|.+.+ .++++|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN---------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT---------EEEEEEEEEECCGGGH
T ss_pred eHHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC---------CEEEeCEEEEecCccH
Confidence 34677788888888888776 8999999998865 457777643 5699999999999754
No 143
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.96 E-value=7.8e-09 Score=102.95 Aligned_cols=139 Identities=17% Similarity=0.244 Sum_probs=85.8
Q ss_pred CCeEEEECCChHHHHHHHHHHh-----cCCCeEEEecCCCCCc-------------------ccc-----cCCcCceeec
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-----QSIPYVILERENCYAS-------------------IWK-----KYSYDRLRLH 57 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-----~g~~v~lie~~~~~gg-------------------~~~-----~~~~~~~~~~ 57 (396)
.+||+|||||++|+++|..|++ .|++|+|||+.+.... .|. ......+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 9999999998753211 110 0011111111
Q ss_pred ccc---ccc---cCCCCC-CCCCC-CCCCCHHHHHHHHHHHHHhcC---CcceeeeceEEEEEEEcC------CCCceEE
Q 016069 58 LAK---QFC---QLPHLP-FPSSY-PMFVSRAQFIEYLDHYVSHFN---IVPSIRYQRSVESASYDE------ATNMWNV 120 (396)
Q Consensus 58 ~~~---~~~---~~~~~~-~~~~~-~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~v~~i~~~~------~~~~~~v 120 (396)
.+. .+. .+.... ..... ....++..+.++|.+.+.+.+ +.+ +++++|+++..++ +...+++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v--~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKV--ERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCE--ECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEE--EeCCEEEEEEecCcccccCCCCCEEE
Confidence 110 000 000000 00011 123678889899988888776 566 9999999998764 1234666
Q ss_pred EEeecC--------------------------------------CCCceeeEEEEeCEEEEeecCCC
Q 016069 121 KASNLL--------------------------------------SPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 121 ~~~~~~--------------------------------------~~g~~~~~~~~~d~vviAtG~~s 149 (396)
+..+.. ..|.. .++++|+||.|+|..|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~--~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEI--ETVHCKYVIGCDGGHS 230 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCE--EEEEEEEEEECCCTTC
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCce--EEEEeCEEEeccCCCC
Confidence 655410 01332 5799999999999866
No 144
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.96 E-value=1.5e-09 Score=100.94 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.....+...+.+.+++.|+++ +++++|+++..++ +.|.|++.+ .++++|.||+|+|.++
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~---------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA---------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS---------EEEEESEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC---------CEEEcCEEEECCChhH
Confidence 345677788888888888776 8899999998875 558787765 5799999999999765
No 145
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.95 E-value=6.7e-09 Score=101.41 Aligned_cols=66 Identities=20% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.....+...+...+.+.|..+ +.+++|+++..++ ++.+.|.+.+..+ |+. ..+++|.||+|+|.++
T Consensus 167 vd~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~t-g~~--~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLT-DTT--HTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEEEEEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCC-Cce--EEEECCEEEECCCcch
Confidence 345667777777788888776 9999999998865 2335677766332 222 6899999999999865
No 146
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.93 E-value=4.8e-09 Score=98.19 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
...+...+.+.+.+.++++ +++++|+++..++ +.+.|.+.+ .++++|.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~v~v~t~~---------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATL--RAGETVTELVPDA--DGVSVTTDR---------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEESS---------CEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEE--ECCCEEEEEEEcC--CeEEEEECC---------CEEEcCEEEEcCCcCh
Confidence 3466677777777778766 8999999998765 567776543 5699999999999763
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.93 E-value=5.4e-09 Score=98.06 Aligned_cols=60 Identities=10% Similarity=0.006 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.....+...+.+.+++.++++ +++++|+++..++ +..+.|.+.+ .++++|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDI--IQNCEVTGFIKDG-EKVTGVKTTR---------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS-SBEEEEEETT---------CCEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEE--EcCCeEEEEEEeC-CEEEEEEeCC---------ceEECCEEEECCchhH
Confidence 345678888888888888776 8999999998764 2346676654 4589999999999754
No 148
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=1.5e-08 Score=98.08 Aligned_cols=38 Identities=21% Similarity=0.406 Sum_probs=35.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg 44 (396)
.+||+|||||++|+++|..|+++|.+|+|+|+.+..||
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999987765
No 149
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.90 E-value=2.9e-09 Score=103.76 Aligned_cols=62 Identities=8% Similarity=0.099 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
.++..+..++.+.+.+.|+.+ +.+ +|+++..+++...+.|.+.++ .++++|+||+|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCchh
Confidence 456788889988888888776 777 899998754222345666654 57999999999997553
No 150
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.89 E-value=1.5e-08 Score=97.79 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
....+...+.+.+.+.|+.+ +.+++|+++..++ +.|.|.+.+..+ |+. .++++|.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~-G~~--~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDT-GKK--YSWQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCC-CCE--EEEECCEEEECCChhH
Confidence 45677788888888888776 8899999998865 667788754211 221 4799999999999865
No 151
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.85 E-value=2.4e-09 Score=100.57 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~ 41 (396)
.+||+|||||++|+++|+.|+++ |++|+|+|+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 37999999999999999999999 999999998753
No 152
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.82 E-value=1.9e-08 Score=95.20 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=35.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI 45 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~ 45 (396)
+||+|||||++|+++|+.|++.|.+|+|+|+.+.+||.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 69999999999999999999999999999998888773
No 153
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.81 E-value=4.7e-09 Score=92.85 Aligned_cols=46 Identities=20% Similarity=0.313 Sum_probs=40.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDR 53 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~ 53 (396)
+||+||||||+|+++|..|+++|++|+|+|+.+.+||.+.....+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~ 48 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA 48 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC
Confidence 7999999999999999999999999999999999998765433333
No 154
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.81 E-value=2.7e-08 Score=89.29 Aligned_cols=105 Identities=24% Similarity=0.314 Sum_probs=64.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCC-cccccC-CcCceeecccc-ccccCCCCCCCC--CCCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYA-SIWKKY-SYDRLRLHLAK-QFCQLPHLPFPS--SYPMFVS 79 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~g-g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 79 (396)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+..| +.|... .+....+.... .+..-...++.. .+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 46999999999999999999998 99999999988776 466422 12222221110 000000111110 0011124
Q ss_pred HHHHHHHHHHHHHhc-CCcceeeeceEEEEEEEcC
Q 016069 80 RAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDE 113 (396)
Q Consensus 80 ~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~i~~~~ 113 (396)
..++...+.+.+.+. ++++ +.++.|+++..++
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i--~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKL--FNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEE--ETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEE--Eecceeeeeeecc
Confidence 566677777766664 6555 8899999998763
No 155
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.80 E-value=5.6e-08 Score=95.35 Aligned_cols=145 Identities=16% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc-c-cc-------cCC--cCcee--e-c---ccccc-
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS-I-WK-------KYS--YDRLR--L-H---LAKQF- 62 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg-~-~~-------~~~--~~~~~--~-~---~~~~~- 62 (396)
|+.....+||+|||||++|+++|..|++.|.+|+|+|+....+| + +. ... .+... + + ....+
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 55554568999999999999999999999999999999875432 1 11 000 00000 0 0 00000
Q ss_pred ------------------ccCCCCCCC-------------CC--------CC-----CCCCHHHHHHHHHHHHHhcCCcc
Q 016069 63 ------------------CQLPHLPFP-------------SS--------YP-----MFVSRAQFIEYLDHYVSHFNIVP 98 (396)
Q Consensus 63 ------------------~~~~~~~~~-------------~~--------~~-----~~~~~~~~~~~l~~~~~~~~~~~ 98 (396)
..-.+.++. .. .. .-.+...+...+.+.+.+.++++
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i 160 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI 160 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEE
Confidence 000000100 00 00 00123577778888788778766
Q ss_pred eeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 99 SIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 99 ~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
++++.|+++..++++..+.|...+..+ |+. ..+.++.||+|||.++.
T Consensus 161 --~~~~~v~~L~~~~~g~v~Gv~~~~~~~-g~~--~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 161 --FSEWYALDLVKNQDGAVVGCTALCIET-GEV--VYFKARATVLATGGAGR 207 (588)
T ss_dssp --EETEEEEEEEECTTSCEEEEEEEETTT-CCE--EEEEEEEEEECCCCCGG
T ss_pred --EeCcEEEEEEECCCCEEEEEEEEEcCC-CeE--EEEEcCEEEECCCCCcc
Confidence 999999999875222333345433111 222 57899999999998653
No 156
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.80 E-value=2.2e-08 Score=97.22 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHh-cCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 78 VSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
..+..+.++|.+.+.+ .|+.+ +++ +|+++..+++.....|.+.++ .++++|+||.|+|.+|.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 4678888999988888 78766 788 699998764222335666554 45999999999997653
No 157
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.78 E-value=1.4e-08 Score=99.08 Aligned_cols=62 Identities=15% Similarity=0.200 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHhc-CCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 78 VSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
..+..+.+++.+.+.+. |+.+ +++ +|+++..+++...+.|.+.++ .++++|.||+|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCchh
Confidence 57788999999988888 8776 888 999998754222355666654 57999999999996553
No 158
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.77 E-value=2.1e-08 Score=97.18 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016069 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (396)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~ 150 (396)
..+..+...|.+.+.+.|+.+ +++ +|+++..+++...+.|++.++ .++++|+||.|+|.+|.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 567889999998888888776 888 899998754223355766654 57999999999997654
No 159
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.77 E-value=7e-08 Score=94.55 Aligned_cols=136 Identities=16% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC--------CcC----ceeecccccc------------
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--------SYD----RLRLHLAKQF------------ 62 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~--------~~~----~~~~~~~~~~------------ 62 (396)
.+||+|||+|++|+++|..|++.|.+|+|+|+.+..||..... ... ++. +....+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE-DKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCC-CCTHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999988777532210 000 000 000000
Q ss_pred ---------------------ccCC--------CCCCCCCC---CCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEE
Q 016069 63 ---------------------CQLP--------HLPFPSSY---PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESAS 110 (396)
Q Consensus 63 ---------------------~~~~--------~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~ 110 (396)
.... ....+... ........+...|.+.+++.++++ +++++|+++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i--~~~t~v~~l~ 282 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDI--RLNSRVVRIL 282 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeE--EecCEEEEEE
Confidence 0000 00000000 001235678888888888888776 9999999997
Q ss_pred EcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 111 YDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
.++++..+.|...+.. |+. .++.+|.||+|||.++
T Consensus 283 ~~~~g~v~GV~~~~~~--G~~--~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 283 EDASGKVTGVLVKGEY--TGY--YVIKADAVVIAAGGFA 317 (572)
T ss_dssp EC--CCEEEEEEEETT--TEE--EEEECSEEEECCCCCT
T ss_pred ECCCCeEEEEEEEeCC--CcE--EEEEcCEEEEeCCCCc
Confidence 6531233335554311 222 5789999999999754
No 160
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.77 E-value=1.5e-08 Score=95.62 Aligned_cols=39 Identities=26% Similarity=0.471 Sum_probs=36.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
+||+|||||++|+++|+.|+++|.+|+|+|+.+.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 489999999999999999999999999999998888743
No 161
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.75 E-value=1.7e-08 Score=96.61 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=35.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC------CCeEEEecCCCCCc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS------IPYVILERENCYAS 44 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g------~~v~lie~~~~~gg 44 (396)
++||+|||||++||++|+.|++.| .+|+|+|+.+.+||
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999988886
No 162
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.75 E-value=2.7e-08 Score=93.96 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=36.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
+||+|||||++|+++|+.|+++|.+|+|+|+.+..||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 589999999999999999999999999999998887643
No 163
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.72 E-value=5e-08 Score=99.99 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCc-eEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNM-WNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
....+...+.+.+++.|+.+ +.+++|+++..++ +. +.|.+.+ .++++|.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i--~~~t~V~~i~~~~--~~v~~V~t~~---------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTY--RGSTTVTGIEQSG--GRVTGVQTAD---------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--ECCceEEEEEEeC--CEEEEEEECC---------cEEECCEEEECCccch
Confidence 55678888888888888776 8899999998764 44 3466644 5799999999999865
No 164
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.70 E-value=1e-07 Score=93.23 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
....+...+...+.+.|..+ +.+++|+++..++ +..|.|.+.+..+ |+. .++++|.||+|+|.++
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i--~~~t~V~~l~~~~-~~v~gV~~~d~~t-g~~--~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYL--VSKMKAVGFLYEG-DQIVGVKARDLLT-DEV--IEIKAKLVINTSGPWV 250 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEEBSCEEECCGGGH
T ss_pred chHHHHHHHHHHHHHcCCeE--EeccEEEEEEEeC-CEEEEEEEEEcCC-CCE--EEEEcCEEEECCChhH
Confidence 34455566666677788776 8899999998865 2345566654221 121 4799999999999875
No 165
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.64 E-value=1.8e-07 Score=89.21 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=79.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.+++|++++.++ +.+.+.+.++ .++.+|.||+|+| .+|+.+
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~~D~vv~A~G--~~p~~~ 267 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG--------EVLEADRVLVAVG--RRPYTE 267 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC--------eEEEcCEEEECcC--CCcCCC
Confidence 777777788776 9999999998765 4566666543 6799999999999 566554
No 166
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.63 E-value=1.8e-07 Score=87.08 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=79.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------~~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM-------------------------------PG-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh-------------------------------hc-ccCHHHHHH
Confidence 4789999999999999999999999999999876321 00 123466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.++++ +.+++|.+++.++ +.+.+.+.++ .++.+|.||+|+| ..|+.
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g--------~~i~~d~vv~a~G--~~p~~ 245 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG--------EVIPCDLVVSAVG--LRPRT 245 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECcC--CCcCH
Confidence 777778788776 9999999998764 5566777654 6799999999999 45543
No 167
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.62 E-value=3e-07 Score=90.46 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~ 42 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+....
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~ 53 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPT 53 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 479999999999999999999999999999997643
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.61 E-value=3.3e-07 Score=90.12 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~ 42 (396)
.+||+|||||++|+++|..|++.| .+|+|+|+....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 479999999999999999999999 999999997643
No 169
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.60 E-value=3.1e-08 Score=95.90 Aligned_cols=47 Identities=26% Similarity=0.502 Sum_probs=40.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCcccc
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWK 47 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~ 47 (396)
|+.+...+||+|||||++||+||+.|+++ |++|+|+|+++++||..+
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 56555568999999999999999999984 999999999999999654
No 170
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.60 E-value=3.3e-07 Score=87.48 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976321 0 123466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe-e--cCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-N--LLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~--~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~ 155 (396)
+.+.+++.++++ +.++.|++++.++ +.+.+.+. + +.. .++.+|.||+|+| .+|+...
T Consensus 216 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~i~~D~vv~a~G--~~p~~~~ 275 (464)
T 2eq6_A 216 LRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGGEG------EEVVVDKVLVAVG--RKPRTEG 275 (464)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCCSC------EEEEESEEEECSC--EEESCTT
T ss_pred HHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCCce------eEEEcCEEEECCC--cccCCCC
Confidence 777788888777 9999999998764 45666665 3 321 4899999999999 5666543
No 171
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.59 E-value=1.3e-08 Score=94.68 Aligned_cols=119 Identities=18% Similarity=0.163 Sum_probs=74.2
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCC---Ccc--cccCCcC----------c-eee----ccccccccC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYD----------R-LRL----HLAKQFCQL 65 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~---gg~--~~~~~~~----------~-~~~----~~~~~~~~~ 65 (396)
+||+|||||++|+++|..|+++ |++|+|+|+.+.. |.. +..+... . +.. .....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 4899999999999999999999 9999999998755 221 1111000 0 000 00000000
Q ss_pred CCCCCCC--CCC-CCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEE
Q 016069 66 PHLPFPS--SYP-MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (396)
Q Consensus 66 ~~~~~~~--~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vv 142 (396)
....... ... ....+.++.+.|.+.+.+.++++ +++++|++++.. .++++|.||
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~---------------------~~~~ad~vV 136 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAI--RFESPLLEHGEL---------------------PLADYDLVV 136 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEE--ETTCCCCSGGGC---------------------CGGGCSEEE
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEE--EeCCEeccchhc---------------------ccccCCEEE
Confidence 0000000 000 13577899999998888887766 889888766421 124789999
Q ss_pred EeecCCCC
Q 016069 143 VASGETSN 150 (396)
Q Consensus 143 iAtG~~s~ 150 (396)
.|+|..|.
T Consensus 137 ~AdG~~S~ 144 (381)
T 3c4a_A 137 LANGVNHK 144 (381)
T ss_dssp ECCGGGGG
T ss_pred ECCCCCch
Confidence 99998765
No 172
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.58 E-value=2.6e-08 Score=96.79 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg 44 (396)
.+||+|||||++|+++|..|++ |.+|+|+|+....+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 5899999999999999999999 999999999876543
No 173
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.57 E-value=4.6e-08 Score=87.06 Aligned_cols=189 Identities=13% Similarity=0.181 Sum_probs=101.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh-cCceEEEEecCceeeehhhhHHHHHHh-hcC-ChhhHHHHHHHHHHHHhccccccCc
Q 016069 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPVHVLSREMVYLGLVLL-RYV-PCGGVDTLMVMLSRLVYGDLSKYGI 263 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~-g~~v~~~~r~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
..++|||+|.+|+.+|..|++. |.+|+++++.+. +.... ....... ..+ ...... ++. ++++
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg~~--~~~~~~~~~~~~~~~~~~----~l~--------~~G~ 104 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGGGA--WLGGQLFSAMIVRKPAHL----FLD--------EIGV 104 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCTTT--TCCSTTCCCEEEETTTHH----HHH--------HHTC
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCCce--ecCCcchHHHHcCcHHHH----HHH--------HcCC
Confidence 4799999999999999999997 999999999872 11100 0000000 000 000000 011 1111
Q ss_pred CCCCCCcchhhhccCCccccCchhhhhhc-CCCeEEccC--ceeEE--CC---eEEec---------CC-----cEEeCc
Q 016069 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIR--GN---EVIFE---------NG-----HSHHFD 321 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~~~--v~~~~--~~---~v~~~---------~g-----~~~~~D 321 (396)
.......... ......+...+.+.+. ..+++++.+ ++++. .+ ++.+. +| .++++|
T Consensus 105 ~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad 181 (284)
T 1rp0_A 105 AYDEQDTYVV---VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK 181 (284)
T ss_dssp CCEECSSEEE---ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE
T ss_pred CcccCCCEEE---ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECC
Confidence 1111110000 0001112223344444 468999887 77774 23 34442 32 578999
Q ss_pred EEEECCCCCCCcccccccCC-------CCCCCCCCCcCCCC------CCCccCCCceEEEeccccc----------ccCc
Q 016069 322 SIVFCTGFKRSTNVWLKQGD-------DSMLNDDGIPKQSY------PNHWKGKNGLYCVGLSRKG----------LYGA 378 (396)
Q Consensus 322 ~vi~atG~~~~~~~~~~~~~-------~~~~~~~g~~~~~~------~~~~~~~~~vya~Gd~~~~----------~~~a 378 (396)
.||.|+|..++...+.. .. ..+....|.. .+. ....++.|++|++|+++.. ...+
T Consensus 182 ~VV~AtG~~s~~~~~~~-~~~~~~g~~~~v~~~~g~~-~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~ 259 (284)
T 1rp0_A 182 IVVSSCGHDGPFGATGV-KRLKSIGMIDHVPGMKALD-MNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM 259 (284)
T ss_dssp EEEECCCSSSTTTTHHH-HHHHHTTSSSCCCCCEEEC-HHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHH
T ss_pred EEEECCCCchHHHHHHH-HHhhhccCCCCcCCcCCch-hhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHH
Confidence 99999999887654422 10 0111122211 110 0112456999999998532 1156
Q ss_pred hHHHHHHHHHHhhhcCC
Q 016069 379 AADAQNIADHINSILSP 395 (396)
Q Consensus 379 ~~~a~~~a~~i~~~l~~ 395 (396)
..+|+.+|.+|.++|..
T Consensus 260 ~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 260 MISGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHHHhhh
Confidence 67999999999998863
No 174
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.56 E-value=2.3e-07 Score=85.30 Aligned_cols=43 Identities=30% Similarity=0.363 Sum_probs=39.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC-CCCCccccc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-NCYASIWKK 48 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~-~~~gg~~~~ 48 (396)
..+||+|||||++|+++|..|.++|++|+|+|+. +.+||.|..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 4689999999999999999999999999999999 999997764
No 175
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.56 E-value=1.2e-07 Score=89.61 Aligned_cols=104 Identities=24% Similarity=0.295 Sum_probs=72.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc--CceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g--~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
.|+|+|||+|+.|+.+|..|.+.+ .+||++++++.+......... ... ......
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v---~~g--------------------~~~~~~- 57 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHL---AMG--------------------WRKFED- 57 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHH---HHT--------------------CSCGGG-
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHH---hcC--------------------CCCHHH-
Confidence 368999999999999999999876 579999998854432111100 000 000000
Q ss_pred CCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC--eEEecCCcEEeCcEEEECCCCCCC
Q 016069 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRS 332 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~ 332 (396)
....+.+.+++.+|+++.+ ++.++.+ .|.+++|+++++|.+|+|||.++.
T Consensus 58 -------------------i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 58 -------------------ISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp -------------------SEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred -------------------hhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 0011224456678999888 9999865 589999999999999999998754
No 176
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.55 E-value=9.7e-08 Score=90.82 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEec
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILER 38 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~ 38 (396)
++||+|||||++|+++|+.|+++| .+|+|+|+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 479999999999999999999999 99999999
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=7e-07 Score=85.02 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=78.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------S--GFEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4799999999999999999999999999999876321 0 012466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.++.|.+++.++ +.+.+++.+. |+. .++.+|.||+|+| .+|+..
T Consensus 217 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~---g~~--~~~~~D~vv~a~G--~~p~~~ 273 (455)
T 1ebd_A 217 IKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEAN---GET--KTIDADYVLVTVG--RRPNTD 273 (455)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEET---TEE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeC---Cce--eEEEcCEEEECcC--CCcccC
Confidence 777778888776 9999999998764 4455665421 111 6799999999999 566543
No 178
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.54 E-value=8.3e-07 Score=87.92 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~ 42 (396)
.+||+|||||.+|+++|..|++.|.+|+|+|+....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 589999999999999999999999999999997654
No 179
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.53 E-value=5.4e-07 Score=87.14 Aligned_cols=103 Identities=12% Similarity=0.008 Sum_probs=81.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
.+.+++|||||+.|+.+|..+++.|.+|+++++...+ + ....++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------------------~--~~D~ei~~ 267 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------------------R--GFDQQCAV 267 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------------------T--TSCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------------------c--ccchhHHH
Confidence 3578999999999999999999999999999875421 1 12346777
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI 156 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~~ 156 (396)
.+....++.++.+ +.+..+..+...+ +...+.+.++ ..+.+|.|++|+| .+|+...+
T Consensus 268 ~l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~--------~~~~~D~vLvAvG--R~Pnt~~L 324 (542)
T 4b1b_A 268 KVKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK--------TSELYDTVLYAIG--RKGDIDGL 324 (542)
T ss_dssp HHHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEESCGGG
T ss_pred HHHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC--------CeEEEEEEEEccc--ccCCcccc
Confidence 8888888888876 9999999998876 6666777654 5678999999999 77876543
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.52 E-value=3.4e-07 Score=86.97 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=76.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++|+.+.+.. . ....++.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-------------------------------V-YLDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-------------------------------c-cCCHHHHHH
Confidence 57999999999999999999999999999999763210 0 012466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.++.|.+++.++ ..+.+.+. + .++.+|.||+|+| .+|+.+
T Consensus 197 l~~~l~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~-~--------~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 197 LTEEMEANNITI--ATGETVERYEGDG--RVQKVVTD-K--------NAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHTTTEEE--EESCCEEEEECSS--BCCEEEES-S--------CEEECSEEEECSC--EEESCG
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEccC--cEEEEEEC-C--------CEEECCEEEECcC--CCCChH
Confidence 888788888766 9999999998642 33345552 2 5789999999999 566644
No 181
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.51 E-value=6.4e-07 Score=88.69 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc------CCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~------g~~v~lie~~~~ 41 (396)
.+||||||||+||+++|..|++. |.+|+|+|+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 48999999999999999999997 999999999754
No 182
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.50 E-value=9.3e-07 Score=84.74 Aligned_cols=108 Identities=16% Similarity=0.238 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG-------------------------------A--SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------S--SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999987432 0 012466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|++++.+++++.+.+.+.+..+ |+. .++.+|.||+|+| .+|+..
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~~ 290 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKT-NKQ--ENLEAEVLLVAVG--RRPYIA 290 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCC-CCc--eEEECCEEEECCC--CCcCCC
Confidence 777788888777 999999999872112455666652111 111 6799999999999 566654
No 183
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.50 E-value=9.2e-07 Score=89.08 Aligned_cols=38 Identities=39% Similarity=0.554 Sum_probs=35.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg 44 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 57999999999999999999999999999999888876
No 184
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.49 E-value=6.2e-07 Score=85.21 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------P--SFDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------h--hhhHHHHHH
Confidence 4689999999999999999999999999999876321 0 012356677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.+++|.+++.++ ++.+.+.+.++ .++.+|.||+|+| .+|+..
T Consensus 214 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~i~~D~vv~a~G--~~p~~~ 268 (450)
T 1ges_A 214 LVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG--------RSETVDCLIWAIG--REPAND 268 (450)
T ss_dssp HHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC--------cEEEcCEEEECCC--CCcCCC
Confidence 777777788776 9999999998754 23366777664 5789999999999 566654
No 185
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.47 E-value=7.9e-07 Score=84.81 Aligned_cols=101 Identities=18% Similarity=0.092 Sum_probs=78.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQ--FDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876321 00 12355667
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeE-EEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~-~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|++++.++ +.+.+++.++ . ++.+|.||+|+| .+|+..
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G--------~~~i~~D~vv~a~G--~~p~~~ 267 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG--------TRLEGFDSVIWAVG--RAPNTR 267 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC--------CEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC--------cEEEEcCEEEECCC--CCcCCC
Confidence 777777788776 9999999998754 3466777654 5 799999999999 566653
No 186
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.44 E-value=2.2e-06 Score=85.03 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHH---h-cCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLS---L-QSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~---~-~g~~v~lie~~~~ 41 (396)
.+||+|||||++|+++|..|+ + .|.+|+|+|+...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999864
No 187
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.44 E-value=1.5e-06 Score=81.71 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....++.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l-------------------------------~-~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL-------------------------------A-RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh-------------------------------h-hhcCHHHHHH
Confidence 4689999999999999999999999999999887321 0 0123577788
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.|+++ ++++.|.++..++ +....|.+.++ .++.+|.||+|+| ..|+.
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG--------~~i~aD~Vv~a~G--~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG--------SVIPADIVIVGIG--IVPCV 253 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS--------CEEECSEEEECSC--CEESC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECCC--CccCh
Confidence 888888888877 9999999998754 22235777665 6799999999999 55654
No 188
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.44 E-value=5.1e-07 Score=85.49 Aligned_cols=105 Identities=17% Similarity=0.315 Sum_probs=74.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCc
Q 016069 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~---~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
++|+|||+|..|+.+|..|++ .+.+|+++++++.......... .......
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~---~~~g~~~------------------------ 57 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPW---VGVGWKE------------------------ 57 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHH---HHHTSSC------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccc---cccCccC------------------------
Confidence 689999999999999999999 7889999999984332211110 0000000
Q ss_pred CCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC--eEEecCCcEEeCcEEEECCCCCCCcc
Q 016069 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (396)
.......+.+.+++.+++++.+ ++.++.+ .|.+++|+++.+|.+|+|||.+|+.+
T Consensus 58 ----------------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 58 ----------------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp ----------------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGG
T ss_pred ----------------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcc
Confidence 0011112345566678888877 8888865 58888999999999999999988764
No 189
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.43 E-value=2.8e-07 Score=86.88 Aligned_cols=47 Identities=32% Similarity=0.496 Sum_probs=40.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCccccc
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~~~ 48 (396)
|+.. .++||+|||||++|+++|..|++.| .+|+|+|+.+++||.+..
T Consensus 1 M~~~-~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 1 MSIS-KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp -CCC-TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCC-CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 6532 3689999999999999999999999 899999999999986554
No 190
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.43 E-value=1.6e-06 Score=82.84 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------P--NEDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999986321 1 022456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe-ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|.+++.++ +...+.+. ++ +. .++.+|.||+|+| .+|+..
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g----~~--~~~~~D~vv~a~G--~~p~~~ 274 (464)
T 2a8x_A 218 IEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDG----VA--QELKAEKVLQAIG--FAPNVE 274 (464)
T ss_dssp HHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSS----CE--EEEEESEEEECSC--EEECCS
T ss_pred HHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCC----ce--EEEEcCEEEECCC--CCccCC
Confidence 777778888777 9999999998754 34556654 33 21 5789999999999 566654
No 191
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.42 E-value=2.8e-06 Score=81.32 Aligned_cols=105 Identities=14% Similarity=0.161 Sum_probs=78.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + .....++.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~-~~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG-------------------------------G-VGIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------C-SSCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC-------------------------------C-cccCHHHHHH
Confidence 4689999999999999999999999999999986321 0 0013466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEee---cCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN---LLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~---~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.|+++ +.++.|.+++.++ ++.+.+...+ +.+ .++.+|.||+|+| .+|+..
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~------~~i~~D~vv~a~G--~~p~~~ 285 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS-DGKIDVSIEAASGGKA------EVITCDVLLVCIG--RRPFTK 285 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT-TSCEEEEEEETTSCCC------EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC-CceEEEEEEecCCCCc------eEEEcCEEEECcC--CCcCCC
Confidence 777788888776 9999999998754 2225566432 221 6799999999999 566543
No 192
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=2e-06 Score=82.79 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------R--KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------c--ccchhhHHH
Confidence 4689999999999999999999999999999876321 0 012466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEE-EEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY-YSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~-~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|++++.++ ++.+.+.+.++ .+ +.+|.||+|+| .+|+..
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~D~vi~a~G--~~p~~~ 278 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVS-DKNLSIHLSDG--------RIYEHFDHVIYCVG--RSPDTE 278 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS-TTCEEEEETTS--------CEEEEESEEEECCC--BCCTTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC-CceEEEEECCC--------cEEEECCEEEECCC--CCcCCC
Confidence 777788888877 9999999998754 23356777654 44 89999999999 566653
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=5.8e-07 Score=85.64 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=76.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------P--TYDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999987421 1 012456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~ 155 (396)
+.+..++.++++ +.++.|++++. + + +.+...++ +. .++.+|.||+|+| .+|+.+.
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G----~~--~~i~~D~vv~a~G--~~p~~~~ 272 (458)
T 1lvl_A 218 VAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKG----GQ--LRLEADRVLVAVG--RRPRTKG 272 (458)
T ss_dssp HHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSS----CC--CEECCSCEEECCC--EEECCSS
T ss_pred HHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCC----ce--EEEECCEEEECcC--CCcCCCC
Confidence 777777788777 99999999975 3 3 44542222 11 5799999999999 5676543
No 194
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.42 E-value=3.1e-06 Score=81.41 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=80.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------G--GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------S--SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999877321 0 112466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.++.|.+++.++ +...+.+.+..+ |+. .++.+|.||+|+| ..|+..
T Consensus 245 l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~Vi~a~G--~~p~~~ 303 (491)
T 3urh_A 245 LQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKG-GEA--TTLDAEVVLIATG--RKPSTD 303 (491)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTS-CCC--EEEEESEEEECCC--CEECCT
T ss_pred HHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCC-Cce--EEEEcCEEEEeeC--CccCCC
Confidence 777778888777 9999999998765 556677664221 121 6799999999999 566654
No 195
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=1.1e-06 Score=83.92 Aligned_cols=103 Identities=14% Similarity=0.206 Sum_probs=79.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHH
Confidence 4789999999999999999999999999999986321 0 123466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe---ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~---~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|.+++.++ +.+.+.+. ++.. .++.+|.||+|+| .+|+..
T Consensus 224 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~~~~D~vv~a~G--~~p~~~ 282 (470)
T 1dxl_A 224 FQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGGEQ------TIIEADVVLVSAG--RTPFTS 282 (470)
T ss_dssp HHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSCCC------EEEEESEEECCCC--EEECCT
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCCcc------eEEECCEEEECCC--CCcCCC
Confidence 888888888877 9999999998654 34556655 3322 6799999999999 566543
No 196
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.41 E-value=1.3e-06 Score=83.48 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 4689999999999999999999999999999876321 1 12466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.|+++ +.++.|++++.++ +.+.+.+.+ .++.+|.||+|+| ..|+.
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------~~i~aD~Vv~a~G--~~p~~ 273 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH---------GELRADKLLVATG--RTPNT 273 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT---------EEEEESEEEECSC--EEESC
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC---------cEEEcCEEEECCC--CCcCC
Confidence 777788888776 9999999998754 556666642 6799999999999 45554
No 197
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.41 E-value=5.1e-07 Score=84.50 Aligned_cols=106 Identities=17% Similarity=0.142 Sum_probs=73.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc--CceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g--~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
+|||+|||+|+.|+.+|..|.+.+ .+|+++++++.+..+........ ...+ ...+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~---g~~~--------------------~~~~ 58 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIG---GDRE--------------------LASL 58 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHH---TSSC--------------------GGGG
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhc---CCCC--------------------HHHH
Confidence 799999999999999999998876 47999998874432211110000 0000 0000
Q ss_pred CCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC--eEEecCCcEEeCcEEEECCCCCCCccc
Q 016069 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTNV 335 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~~ 335 (396)
. .-.+.+.+.+++++.+ ++.++.+ .+.+.+|+++++|.+|+|||.+++...
T Consensus 59 ~---------------------~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 59 R---------------------VGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp E---------------------ECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGG
T ss_pred h---------------------hCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccCC
Confidence 0 0013344568998888 9999865 488899999999999999999887643
No 198
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.41 E-value=2.3e-07 Score=88.26 Aligned_cols=46 Identities=15% Similarity=0.282 Sum_probs=41.2
Q ss_pred CCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc
Q 016069 3 EQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (396)
Q Consensus 3 ~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 48 (396)
.....+||+|||||++|+++|..|++.|++|+++|+++..||.+..
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3344689999999999999999999999999999999999997654
No 199
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.40 E-value=1.9e-07 Score=90.16 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
++|||||||++||+||..|+++|++|+|+|+++.+||..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 589999999999999999999999999999999999843
No 200
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=2.1e-06 Score=82.09 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=78.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------P--TLDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999886321 0 012456677
Q ss_pred HHHHH-HhcCCcceeeeceEEEEEEEcCCCCceEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYV-SHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.. ++.++++ +.+++|.+++.++ +.+.+.+. ++ +. .++.+|.||+|+| .+|+..
T Consensus 221 l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~g----~~--~~i~~D~vv~a~G--~~p~~~ 279 (468)
T 2qae_A 221 LVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGKNG----KR--ETVTCEALLVSVG--RRPFTG 279 (468)
T ss_dssp HHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC-------E--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcCCC----ce--EEEECCEEEECCC--cccCCC
Confidence 77777 7788776 9999999998764 44556665 33 11 5789999999999 566543
No 201
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.40 E-value=2.4e-07 Score=86.57 Aligned_cols=49 Identities=24% Similarity=0.288 Sum_probs=41.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCcccccC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKKY 49 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~~~ 49 (396)
|.++..++||+|||||++|+++|..|++. |.+|+|+|+.+++||.+...
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 55444468999999999999999999999 99999999999999977643
No 202
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.39 E-value=6e-07 Score=83.40 Aligned_cols=108 Identities=16% Similarity=0.251 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcC
Q 016069 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (396)
Q Consensus 185 ~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (396)
+..+|+|||+|..|+.+|..|...+.+|+++.+.+.....+.. +...+.. ....
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~--l~~~l~g--------------------~~~~---- 61 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPR--LNEIIAK--------------------NKSI---- 61 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGG--HHHHHHS--------------------CCCG----
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccCh--hhHHHcC--------------------CCCH----
Confidence 4678999999999999999997778899999998843211111 1111100 0000
Q ss_pred CCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC--eEEecCCcEEeCcEEEECCCCCCCcc
Q 016069 265 KPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (396)
........+.+++.+|+++.+ |+.++.+ .|.+++|+++.+|.+|+|||.+|..+
T Consensus 62 ----------------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 62 ----------------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ----------------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred ----------------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 000111234455678999877 8888765 58889999999999999999987653
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=1.5e-06 Score=81.39 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=76.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM-------------------------------SR-AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-ccCHHHHHH
Confidence 4789999999999999999999999999999987321 00 123466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.|+++ +.++.|.+++ + + .|++.++ .++.+|.||+|+| ..|+.
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~--~--~--~v~~~~g--------~~i~~D~vi~a~G--~~p~~ 241 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV--D--G--VVLLDDG--------TRIAADMVVVGIG--VLAND 241 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE--T--T--EEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE--C--C--EEEECCC--------CEEEcCEEEECcC--CCccH
Confidence 777788888877 9999999998 2 3 4777654 6799999999999 55553
No 204
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.39 E-value=1.5e-06 Score=81.40 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=79.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+... + .....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-------------------------------~-~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-------------------------------A-RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch-------------------------------h-hccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 0123567778
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.|+++ ++++.|.++..++ +....|.+.++ .++.+|.||+|+| ..|+.
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG--------~~i~aD~Vv~a~G--~~p~~ 243 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG--------NTLPCDLVVVGVG--VIPNV 243 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS--------CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECcC--CccCH
Confidence 888888888877 8999999998754 22334677665 6799999999999 55553
No 205
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.38 E-value=3.7e-06 Score=79.93 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=78.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------PK-YFDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------cc-cCCHHHHHH
Confidence 4689999999999999999999999999999886321 00 013466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~ 155 (396)
+.+.+++.|+++ +.++.|.+++..+ +.+.|.+.+ .++.+|.||+|+| .+|+..-
T Consensus 195 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~---------g~i~aD~Vv~A~G--~~p~~~~ 248 (452)
T 3oc4_A 195 VQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE---------QEISCDSGIFALN--LHPQLAY 248 (452)
T ss_dssp HHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS---------CEEEESEEEECSC--CBCCCSS
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC---------CEEEeCEEEECcC--CCCChHH
Confidence 777788888776 9999999998654 445566643 4689999999999 5666543
No 206
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.37 E-value=1.7e-06 Score=81.67 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=77.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-------------------------------ER-VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-hhhHHHHHH
Confidence 4689999999999999999999999999999876321 00 123456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEE--cCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASY--DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.|+++ +.++.|++++. ++ +....|.+.++ .++.+|.||+|+| .+|+.
T Consensus 197 l~~~l~~~GV~i--~~~~~v~~i~~~~~~-~~v~~v~~~~G--------~~i~~D~Vv~a~G--~~p~~ 252 (431)
T 1q1r_A 197 YEHLHREAGVDI--RTGTQVCGFEMSTDQ-QKVTAVLCEDG--------TRLPADLVIAGIG--LIPNC 252 (431)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECTTT-CCEEEEEETTS--------CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEeccCC-CcEEEEEeCCC--------CEEEcCEEEECCC--CCcCc
Confidence 777778888877 99999999986 32 23235666654 6789999999999 45543
No 207
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.37 E-value=6.1e-07 Score=84.21 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999988632100 012456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.|+++ ++++.|.+++.++ ....|.+.++ .++.+|.||+|+| ..|+.
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg--------~~i~aD~Vv~a~G--~~p~~ 243 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG--------RSFVADSALICVG--AEPAD 243 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC--------CEEEcCEEEEeeC--CeecH
Confidence 777788888877 8999999998654 4456777765 6799999999999 55553
No 208
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.37 E-value=9.2e-07 Score=84.83 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------Q--GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999986321 0 023456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.++++ +.++.|.+++.++ +...+.+.+... +. .++.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~-~g---~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGANA-PK---EPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSSC-CS---SCEEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccCC-Cc---eEEEcCEEEECcC--CCcCC
Confidence 777777777666 9999999998764 445566654100 00 4578999999999 56664
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.37 E-value=2.3e-06 Score=82.91 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=78.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (396)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------L--IKDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T--CCSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------c--cccHHHHHHH
Confidence 789999999999999999999999999999986321 1 0234667778
Q ss_pred HHHHHhcCCcceeeeceEEEEEEEcCCCCc---eEEEEeecCCCCceeeE-EEEeCEEEEeecCCCCCCC
Q 016069 88 DHYVSHFNIVPSIRYQRSVESASYDEATNM---WNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~---~~v~~~~~~~~g~~~~~-~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+++.|+++ +.+++|++++.++ ++. +.|.+.++ . ++.+|.||+|+| .+|+.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~-~~~v~~~~v~~~~G--------~~~i~aD~Vv~A~G--~~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDA-NGRVQAVVAMTPNG--------EMRIETDFVFLGLG--EQPRS 318 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECT-TSBEEEEEEEETTE--------EEEEECSCEEECCC--CEECC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcC-CCceEEEEEEECCC--------cEEEEcCEEEECcC--CccCC
Confidence 88888888877 9999999998754 232 56777654 4 799999999999 55654
No 210
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.36 E-value=2.2e-06 Score=82.53 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=78.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999886321 10 23466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.|+++ +.++.|++++.++ +.+.+.+.++ .++.+|.||+|+| .+|+.
T Consensus 229 l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 281 (499)
T 1xdi_A 229 LEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG--------RTVEGSHALMTIG--SVPNT 281 (499)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC--------cEEEcCEEEECCC--CCcCC
Confidence 788888888877 9999999998754 4455665443 6799999999999 55654
No 211
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.35 E-value=3.7e-06 Score=80.79 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=77.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-------------------------------N--LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-------------------------------T--CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--cCCHHHHHH
Confidence 4789999999999999999999999999999987422 0 012356666
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~~ 155 (396)
+.+..++. +.+ +.++.|..++.++ +...+...+.. |+. .++.+|.||+|+| ..|+...
T Consensus 221 l~~~l~~~-V~i--~~~~~v~~i~~~~--~~v~v~~~~~~--G~~--~~i~~D~Vi~a~G--~~p~~~~ 278 (492)
T 3ic9_A 221 AEKTFNEE-FYF--DAKARVISTIEKE--DAVEVIYFDKS--GQK--TTESFQYVLAATG--RKANVDK 278 (492)
T ss_dssp HHHHHHTT-SEE--ETTCEEEEEEECS--SSEEEEEECTT--CCE--EEEEESEEEECSC--CEESCSS
T ss_pred HHHHHhhC-cEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cce--EEEECCEEEEeeC--CccCCCC
Confidence 66666654 554 8999999998765 45556665211 222 6799999999999 5666543
No 212
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.35 E-value=2.3e-06 Score=81.82 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+. +. ....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------PG-FTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------TT-TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------cc-ccCHHHHH
Confidence 46899999999999999999999 99999999876321 00 12346677
Q ss_pred HHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+.+++.++++ +.+++|.+++.++ +.+.+.+.++ .++.+|.||+|+| ..|+.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 260 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK--------RTLDADLVILAAG--VSPNT 260 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC--------CEEEcCEEEECCC--CCcCH
Confidence 7777888888877 9999999998754 5566777665 6799999999999 55553
No 213
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.35 E-value=2.6e-06 Score=81.78 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=79.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
..+++|||||+.|+.+|..|.+. |.+|+++++.+.+. + ....++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------R--GFDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------T--TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------c--ccCHHH
Confidence 46899999999999999999999 99999999987321 0 012456
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
.+.+.+.+++.|+++ +.++.|.+++.++ ++.+.|.+.++ .++.+|.||+|+| .+|+..
T Consensus 234 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~~ 291 (490)
T 1fec_A 234 RKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG--------AEADYDVVMLAIG--RVPRSQ 291 (490)
T ss_dssp HHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC--------cEEEcCEEEEccC--CCcCcc
Confidence 677777778888776 9999999998754 23466777654 5789999999999 566553
No 214
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.35 E-value=7e-06 Score=78.70 Aligned_cols=106 Identities=18% Similarity=0.083 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|++.|.+|+++++.... + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------------------R--GFDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------c--ccCHHHHHH
Confidence 468999999999999999999999999999874311 0 013466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.++.|.+++..+ ++...+.+.++.+ ++. .++.+|.||+|+| ..|+..
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-~~~--~~~~~D~vi~a~G--~~p~~~ 292 (483)
T 3dgh_A 233 VAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVET-GEE--SEDVYDTVLWAIG--RKGLVD 292 (483)
T ss_dssp HHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTT-CCE--EEEEESEEEECSC--EEECCG
T ss_pred HHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCC-Cce--eEEEcCEEEECcc--cccCcC
Confidence 777788888887 9999999998754 2445677776532 222 5799999999999 566543
No 215
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.34 E-value=3.1e-06 Score=81.35 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
..+++|||||+.|+.+|..|.+. |.+|+++++.+.+. + ....++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------R--GFDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------T--TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------c--ccCHHH
Confidence 46899999999999999999999 99999999876321 0 012356
Q ss_pred HHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+.+.+++.++++ +.++.|.+++.++ ++...|.+.++ .++.+|.||+|+| .+|+.
T Consensus 238 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG--------KTLDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC--------cEEEcCEEEECCC--Ccccc
Confidence 677777778888877 9999999998754 23466777654 5799999999999 56654
No 216
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.34 E-value=2.7e-06 Score=80.90 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=76.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL-------------------------------YK-YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-------------------------------hh-hhhhhHHHH
Confidence 4689999999999999999999999999999876321 00 122466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.|+++ +.+++|++++.++ +.+.....++ .++.+|.||+|+| .+|+..
T Consensus 197 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~~g--------~~i~~D~vv~a~G--~~p~~~ 250 (452)
T 2cdu_A 197 LAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTLDG--------KEIKSDIAILCIG--FRPNTE 250 (452)
T ss_dssp HHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECCG
T ss_pred HHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEeCC--------CEEECCEEEECcC--CCCCHH
Confidence 777788888877 9999999998643 4433222233 5789999999999 566543
No 217
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.33 E-value=2.7e-06 Score=81.76 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=76.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ....++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-------------------------------AG-YYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------------------------------hh-HHHHHHHHH
Confidence 5789999999999999999999999999999876321 00 123466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|++++.+. ....+.+ ++ .++.+|.||+|+| .+|+.+
T Consensus 242 l~~~l~~~GV~i--~~~~~v~~i~~~~--~v~~v~~-~g--------~~i~~D~Vi~a~G--~~p~~~ 294 (490)
T 2bc0_A 242 MAKNMEEHGIQL--AFGETVKEVAGNG--KVEKIIT-DK--------NEYDVDMVILAVG--FRPNTT 294 (490)
T ss_dssp HHHHHHTTTCEE--EETCCEEEEECSS--SCCEEEE-SS--------CEEECSEEEECCC--EEECCG
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEcCC--cEEEEEE-CC--------cEEECCEEEECCC--CCcChH
Confidence 777788888777 9999999998532 2222444 33 5799999999999 566643
No 218
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.32 E-value=3.3e-06 Score=80.93 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=78.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------R--KFDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999886321 0 012456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.|+++ +.++.|++++.+++.....|.+.++ + .++.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G----~---~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS----K---SIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS----C---EEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC----c---EEEEcCEEEECCC--CCCcc
Confidence 777777788877 9999999998754221356776653 1 3689999999999 56665
No 219
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.32 E-value=1.7e-06 Score=82.92 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=75.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHHH
Confidence 57999999999999999999999999999998763210 012466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.++++ +.++.|++++.+. +.+.+.+.+ .++.+|.||+|+| ..|+.
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~---------~~i~~D~vi~a~G--~~p~~ 284 (480)
T 3cgb_A 233 IYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK---------GTYKADLVLVSVG--VKPNT 284 (480)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT---------EEEECSEEEECSC--EEESC
T ss_pred HHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC---------CEEEcCEEEECcC--CCcCh
Confidence 777788888876 8999999998642 333444432 6799999999999 45543
No 220
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=3e-06 Score=81.31 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=79.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------R--NFDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.|+++ +.++.|++++.++ +.+.+.+.++ .++.+|.||+|+| ..|+..
T Consensus 238 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vi~A~G--~~p~~~ 291 (484)
T 3o0h_A 238 LNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG--------QTICADRVMLATG--RVPNTT 291 (484)
T ss_dssp HHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC--------cEEEcCEEEEeeC--CCcCCC
Confidence 777777788876 8999999998765 5567877765 5799999999999 556544
No 221
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.31 E-value=1.2e-06 Score=80.77 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=73.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (396)
.+++|||||+.|+.+|..|++.|.+|+++++.+.+. + ...++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999886321 1 124667777
Q ss_pred HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+..++.++++ +.+++|.+++. .. +.+.++ . +.+|.||+|+| ..|+.
T Consensus 190 ~~~l~~~gV~i--~~~~~v~~i~~----~~--v~~~~g--------~-i~~D~vi~a~G--~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKF--FLNSELLEANE----EG--VLTNSG--------F-IEGKVKICAIG--IVPNV 236 (367)
T ss_dssp HHHHHHTTEEE--ECSCCEEEECS----SE--EEETTE--------E-EECSCEEEECC--EEECC
T ss_pred HHHHHHCCCEE--EcCCEEEEEEe----eE--EEECCC--------E-EEcCEEEECcC--CCcCH
Confidence 77788888776 89999998872 22 666553 5 99999999999 56654
No 222
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.31 E-value=9.8e-06 Score=77.79 Aligned_cols=106 Identities=16% Similarity=0.031 Sum_probs=78.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|++.|.+|+++++...+ + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------------------R--GFDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------c--cCCHHHHHH
Confidence 457999999999999999999999999999985411 0 013466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.+.++...+ ++...+...+..+ |+. .++.+|.||+|+| ..|+..
T Consensus 231 l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~~~~D~vi~a~G--~~p~~~ 290 (488)
T 3dgz_A 231 VTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHAS-GKE--DTGTFDTVLWAIG--RVPETR 290 (488)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTT-TEE--EEEEESEEEECSC--EEESCG
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCC-Cee--EEEECCEEEEccc--CCcccC
Confidence 777788888877 9999999998743 2455676665321 221 4689999999999 566543
No 223
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.28 E-value=1.6e-06 Score=81.90 Aligned_cols=105 Identities=23% Similarity=0.335 Sum_probs=72.4
Q ss_pred CeEEEEcCCCCHHHHHHHHHh--hcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcC
Q 016069 187 KNVLVVGSGNSGMEIALDLAN--HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~--~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (396)
++|+|||+|..|+.+|..|++ .+.+|+++++++......... ........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~---~~~~g~~~------------------------- 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP---HLAMGWRK------------------------- 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH---HHHHTCSC-------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc---hhccCccC-------------------------
Confidence 689999999999999999999 678999999988433211100 00000000
Q ss_pred CCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC--eEEecCCcEEeCcEEEECCCCCCCcc
Q 016069 265 KPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (396)
.......+.+.+++.+++++.+ ++.++.+ .+.+++++++.+|.+|+|||.+++.+
T Consensus 55 ---------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 ---------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ---------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ---------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0011111234455678888877 8888766 48888999999999999999987664
No 224
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.27 E-value=4.3e-06 Score=81.89 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=78.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHH
Confidence 4689999999999999999999999999999976321 1 123466677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcC-----------------CCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~-----------------~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s 149 (396)
+.+.+++.++++ +.++.|.++..+. ..+.+.+...++ .++.+|.||+|+| .
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--------~~i~~D~vi~a~G--~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG--------ELLETDLLIMAIG--V 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------CEEEESEEEECSC--E
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC--------CEEEcCEEEECcC--C
Confidence 777778888877 9999999998631 124555666554 6799999999999 5
Q ss_pred CCCC
Q 016069 150 NPFT 153 (396)
Q Consensus 150 ~p~~ 153 (396)
.|+.
T Consensus 266 ~p~~ 269 (565)
T 3ntd_A 266 RPET 269 (565)
T ss_dssp EECC
T ss_pred ccch
Confidence 5553
No 225
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.27 E-value=5.1e-06 Score=74.95 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=74.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999876210 12345556
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.++++ ++++.|.++..+. ++...|.+.+..++|+. .++.+|.||+|+| ..|+.
T Consensus 190 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~--~~i~~D~vv~a~G--~~p~~ 249 (320)
T 1trb_A 190 LMDKVENGNIIL--HTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNI--ESLDVAGLFVAIG--HSPNT 249 (320)
T ss_dssp HHHHHHTSSEEE--ECSCEEEEEEECS-SSEEEEEEECCTTCCCC--EEEECSEEEECSC--EEESC
T ss_pred HHHhcccCCeEE--EcCceeEEEEcCC-CceEEEEEEeccCCCce--EEEEcCEEEEEeC--CCCCh
Confidence 666666677665 8999999998754 22223555541100111 6799999999999 55554
No 226
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.26 E-value=1.2e-06 Score=81.23 Aligned_cols=43 Identities=26% Similarity=0.308 Sum_probs=39.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY 49 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 49 (396)
.+||+|||||++|+++|..|++.|.+|+|+|+.+++||.+...
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 5899999999999999999999999999999999999987643
No 227
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.25 E-value=2.3e-06 Score=80.21 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=72.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCc
Q 016069 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~---~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (396)
++|+|||+|.+|+.+|..|++ .|.+|+++++++......... ..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~-------------------------------~~-- 48 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALP-------------------------------HV-- 48 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSC-------------------------------CC--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchh-------------------------------hc--
Confidence 579999999999999999999 789999999998322110000 00
Q ss_pred CCCCCCcchhhhccCCccccCchhhhhhcCCCeEEccC-ceeEECC--eEEecCCcE----EeCcEEEECCCCCCCcc
Q 016069 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHS----HHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-v~~~~~~--~v~~~~g~~----~~~D~vi~atG~~~~~~ 334 (396)
..+ ..........+.+.+++.+++++.+ ++.++.+ .|.+.+++. +++|.||+|||.+|+.+
T Consensus 49 ---~~~-------~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 49 ---AIG-------VRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp ---CSS-------CCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred ---ccC-------CcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 000 0001112223345566678888888 8888765 588877764 89999999999988764
No 228
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.25 E-value=1.2e-05 Score=76.81 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=79.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999976321 1 113456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.|.+++.++ +...+...++. |. .++.+|.||+|+| ..|+..
T Consensus 227 l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~--g~---~~~~~D~vi~a~G--~~p~~~ 283 (476)
T 3lad_A 227 AQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAE--GE---KSQAFDKLIVAVG--RRPVTT 283 (476)
T ss_dssp HHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSS--EE---EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cc---EEEECCEEEEeeC--CcccCC
Confidence 777777778776 9999999998765 45566666432 11 5789999999999 566554
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.24 E-value=4.9e-06 Score=79.91 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=75.9
Q ss_pred CCeEEEECCChHHHHHHHHHHh----cCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~----~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (396)
..+++|||||+.|+.+|..|.+ .|.+|+++++.+... .. .-..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-------------------------------~~-~l~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-------------------------------GK-ILPEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-------------------------------TT-TSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-------------------------------cc-cCCHH
Confidence 4689999999999999999986 478899998765210 00 01145
Q ss_pred HHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+.+..++.|+++ +.++.|.+++.++ +...|.+.++ .++.+|.||+|+| ..|+.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG--------~~i~aD~Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG--------RKVETDHIVAAVG--LEPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC--------CEEECCEEEECCC--CCccH
Confidence 6677777788888776 9999999998654 4556777665 6799999999999 55554
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.24 E-value=1e-05 Score=77.40 Aligned_cols=110 Identities=15% Similarity=-0.007 Sum_probs=79.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 123456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.++++ +.++.|.+++..++.....+.+.+... |+..+.++.+|.||+|+| ..|+..
T Consensus 234 ~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~~g~~~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 234 CTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGR-LPVMTMIPDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp HHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTS-CCEEEEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCC-CcccceEEEcCEEEEeec--cccCCC
Confidence 777778888777 999999999875422135566654321 110014689999999999 566554
No 231
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.23 E-value=1.5e-06 Score=83.27 Aligned_cols=52 Identities=19% Similarity=0.355 Sum_probs=43.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCccccc-CCcCceeec
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWKK-YSYDRLRLH 57 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~~~-~~~~~~~~~ 57 (396)
.++||+|||||++|+++|..|.+.| .+|+|+|+.+.+||.|.. ..+.+..++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~ 61 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWD 61 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEe
Confidence 3689999999999999999999998 799999999999998875 234454443
No 232
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.23 E-value=2.4e-06 Score=80.74 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=74.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||+.|+.+|..+.+.|.+|+++++.+.+.. ....++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~---------------------------------~~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK---------------------------------LMDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST---------------------------------TSCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc---------------------------------cccchhHHH
Confidence 46899999999999999999999999999999874320 011234556
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.++++ +.+++|.+++.. . +.+.++ +++.+|.|++|+| ..|+.
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~----~--v~~~~g--------~~~~~D~vl~a~G--~~Pn~ 242 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGN----E--ITFKSG--------KVEHYDMIIEGVG--THPNS 242 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETT----E--EEETTS--------CEEECSEEEECCC--EEESC
T ss_pred HHHHhhccceEE--EeccEEEEecCC----e--eeecCC--------eEEeeeeEEEEec--eecCc
Confidence 666777778877 999999887632 2 677665 6789999999999 56654
No 233
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.22 E-value=6.9e-07 Score=86.52 Aligned_cols=40 Identities=30% Similarity=0.418 Sum_probs=37.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIW 46 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~~~gg~~ 46 (396)
.+||+|||||++||+||..|.+.| .+|+|+|+.+++||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999999999 9999999999999854
No 234
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.21 E-value=1e-06 Score=84.34 Aligned_cols=40 Identities=35% Similarity=0.449 Sum_probs=36.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 5799999999999999999999999999999999998843
No 235
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.21 E-value=1.7e-05 Score=75.60 Aligned_cols=132 Identities=16% Similarity=0.146 Sum_probs=72.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCcccccCCcCceee--cccc---ccccCCCC--------CCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRL--HLAK---QFCQLPHL--------PFP 71 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~--~~~~---~~~~~~~~--------~~~ 71 (396)
..+|+|||||..|+.+|..|.+. +.+|+++++.+.+-. .....+.. ..+. .+..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 46899999999999999999998 889999998874310 00000000 0000 00000000 000
Q ss_pred CCCCCCCCHH---HHHHHH-HHHHH-hcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeec
Q 016069 72 SSYPMFVSRA---QFIEYL-DHYVS-HFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASG 146 (396)
Q Consensus 72 ~~~~~~~~~~---~~~~~l-~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG 146 (396)
..+.. .... .+.+.+ ..... ..++. ++.++.|+++..++ +.|.|++.+..+ |+. .++.+|.||+|||
T Consensus 303 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~--i~~~~~v~~v~~~~--~~~~v~~~~~~~-g~~--~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 303 TNYSV-VDTDLIERIYGVFYRQKVSGIPRHA--FRCMTTVERATATA--QGIELALRDAGS-GEL--SVETYDAVILATG 374 (463)
T ss_dssp GTSSC-BCHHHHHHHHHHHHHHHHHCCCCSE--EETTEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESEEEECCC
T ss_pred cCCCc-CCHHHHHHHHHHHHHHHhcCCCCeE--EEeCCEEEEEEecC--CEEEEEEEEcCC-CCe--EEEECCEEEEeeC
Confidence 00000 0111 111111 11111 13444 49999999998765 678888874322 232 5799999999999
Q ss_pred CCCCCC
Q 016069 147 ETSNPF 152 (396)
Q Consensus 147 ~~s~p~ 152 (396)
.+|+
T Consensus 375 --~~p~ 378 (463)
T 3s5w_A 375 --YERQ 378 (463)
T ss_dssp --EECC
T ss_pred --CCCC
Confidence 5555
No 236
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.19 E-value=1.2e-06 Score=83.43 Aligned_cols=41 Identities=34% Similarity=0.456 Sum_probs=37.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 47 (396)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999998888543
No 237
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.19 E-value=1e-05 Score=77.10 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=78.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~--~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------S--RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEE-EeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~-~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.+++.|+++ +.++.|.+++.++ ++.+.|. +.++ . +.+|.||+|+| ..|+..
T Consensus 217 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~g--------~-i~aD~Vv~a~G--~~p~~~ 271 (463)
T 4dna_A 217 LHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKHG--------E-IVADQVMLALG--RMPNTN 271 (463)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSSC--------E-EEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCCC--------e-EEeCEEEEeeC--cccCCC
Confidence 777788888877 9999999998764 2335566 5553 5 99999999999 556544
No 238
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.18 E-value=3.2e-06 Score=75.30 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=67.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCCC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKP 266 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (396)
.+++|||+|+.|+.+|..|++.|.+|+++++++... ... .....+ +
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~--~~~----~~~~~~-~--------------------------- 48 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN--RFA----SHSHGF-L--------------------------- 48 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG--GGC----SCCCSS-T---------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc--ccc----hhhcCC-c---------------------------
Confidence 479999999999999999999999999999875110 000 000000 0
Q ss_pred CCCcchhhhccCCccccCchhhhhhcCC-CeEEccC-ceeEECC----eEEecCCcEEeCcEEEECCCCCCCcc
Q 016069 267 REGPFFMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~v~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (396)
... ......+...+.+.+++. +++++.. ++.++.+ .+.+.+|+++.+|.||+|||..|..+
T Consensus 49 ~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 49 GQD-------GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp TCT-------TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred CCC-------CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 000 000011111223344443 7777666 7777644 47778888999999999999987653
No 239
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.17 E-value=1.5e-06 Score=84.29 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=37.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
++||+|||||++|+++|..|++.|++|+|+|+++++||..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 4799999999999999999999999999999999998854
No 240
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.17 E-value=1.3e-05 Score=72.73 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=74.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ......+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 4689999999999999999999999999999876211 11344556
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.++++ +.++.|.+++.++ +...|.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQT-QEE--LALEVDAVLILAG--YITKL 254 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECCC--EEEEC
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCC-Cce--EEEecCEEEEeec--CCCCc
Confidence 666667778776 9999999998742 323455552111 222 5789999999999 55543
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.15 E-value=3.2e-05 Score=74.78 Aligned_cols=107 Identities=16% Similarity=0.040 Sum_probs=75.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|++.|.+|+++++.... + ....++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL--------------------------------R--GFDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc--------------------------------c--cCCHHHHHH
Confidence 457999999999999999999999999999975311 1 013466777
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCC--CCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+..++.++++ +.++.+..+....+ .+...+......+ ++. .++.+|.||+|+| .+|+..
T Consensus 256 ~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g-~~~--~~~~~D~vi~a~G--~~p~~~ 318 (519)
T 3qfa_A 256 IGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNS-EEI--IEGEYNTVMLAIG--RDACTR 318 (519)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSS-SCE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCC-cEE--EEEECCEEEEecC--CcccCC
Confidence 777788888876 88988877765431 1344454433211 111 3678999999999 566554
No 242
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.15 E-value=1.9e-06 Score=83.16 Aligned_cols=42 Identities=29% Similarity=0.416 Sum_probs=38.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 48 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 479999999999999999999999999999999999986543
No 243
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.11 E-value=2.3e-06 Score=82.30 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=36.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
+||+|||||++|+++|..|.+.|++|+|+|+.+++||..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 799999999999999999999999999999999998843
No 244
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.10 E-value=2.7e-06 Score=79.01 Aligned_cols=43 Identities=21% Similarity=0.241 Sum_probs=39.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY 49 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~ 49 (396)
.+||+|||||++|+++|..|.+.|.+|+|+|+.+.+||.+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccc
Confidence 4799999999999999999999999999999999999987654
No 245
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.10 E-value=1e-05 Score=79.58 Aligned_cols=98 Identities=15% Similarity=0.262 Sum_probs=76.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------P--PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999876321 1 123456677
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+++.++++ +.++.|.+++.+. +. |.+.++ .++.+|.||+|+| ..|+.
T Consensus 234 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~--v~~~~g--------~~i~~D~Vi~a~G--~~p~~ 284 (588)
T 3ics_A 234 VHEHMKNHDVEL--VFEDGVDALEENG--AV--VRLKSG--------SVIQTDMLILAIG--VQPES 284 (588)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEGGG--TE--EEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EECCeEEEEecCC--CE--EEECCC--------CEEEcCEEEEccC--CCCCh
Confidence 777778888776 8999999997653 33 666654 6799999999999 55554
No 246
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.10 E-value=2.7e-06 Score=81.77 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=38.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
..+||+|||||++||++|+.|.+.|.+|+|+|+.+.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 36899999999999999999999999999999999999853
No 247
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.10 E-value=2.7e-06 Score=78.49 Aligned_cols=41 Identities=24% Similarity=0.257 Sum_probs=38.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 48 (396)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+||....
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 69999999999999999999999999999999999986554
No 248
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.08 E-value=2.9e-06 Score=81.22 Aligned_cols=40 Identities=25% Similarity=0.303 Sum_probs=36.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIW 46 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--~~v~lie~~~~~gg~~ 46 (396)
++||+|||||++|+++|+.|.+.| .+|+|+|+.+.+||..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCcee
Confidence 479999999999999999999999 9999999998888743
No 249
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.07 E-value=2.3e-06 Score=81.86 Aligned_cols=39 Identities=28% Similarity=0.367 Sum_probs=36.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCccc
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIW 46 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~~~gg~~ 46 (396)
+||+|||||++||++|+.|++.|. +|+|+|+.++.||..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 699999999999999999999999 999999999888754
No 250
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.05 E-value=1.9e-05 Score=74.88 Aligned_cols=99 Identities=16% Similarity=0.229 Sum_probs=71.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL-------------------------------RR-SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc-------------------------------hh-hcCHHHHHH
Confidence 3689999999999999999999999999999987321 00 012456666
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++. +++ +.++.|.+++.++ . ......++ .++.+|.||+|+| ..|+.
T Consensus 196 l~~~l~~~-v~i--~~~~~v~~i~~~~--~-v~~v~~~g--------~~i~~D~Vv~a~G--~~p~~ 246 (449)
T 3kd9_A 196 LEEKLKKH-VNL--RLQEITMKIEGEE--R-VEKVVTDA--------GEYKAELVILATG--IKPNI 246 (449)
T ss_dssp HHHHHTTT-SEE--EESCCEEEEECSS--S-CCEEEETT--------EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhC-cEE--EeCCeEEEEeccC--c-EEEEEeCC--------CEEECCEEEEeeC--CccCH
Confidence 66666655 554 8999999987543 2 22223333 6799999999999 55553
No 251
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.04 E-value=2.1e-05 Score=75.62 Aligned_cols=102 Identities=19% Similarity=0.255 Sum_probs=72.8
Q ss_pred CeEEEECCChHHHHHHHHHHhc--------------CCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (396)
..++|||||+.|+.+|..|++. ..+|+|+|..+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4799999999999999988753 36899999987432
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016069 74 YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~ 152 (396)
+. -.+++.+++.+..++.|+++ +.++.|++++.+ ...+.....+ |...+.++.+|.||.|+| ..|+
T Consensus 268 -~~--~~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~----~~~~~~~~~d--g~~~~~~i~ad~viwa~G--v~~~ 333 (502)
T 4g6h_A 268 -NM--FEKKLSSYAQSHLENTSIKV--HLRTAVAKVEEK----QLLAKTKHED--GKITEETIPYGTLIWATG--NKAR 333 (502)
T ss_dssp -TT--SCHHHHHHHHHHHHHTTCEE--ETTEEEEEECSS----EEEEEEECTT--SCEEEEEEECSEEEECCC--EECC
T ss_pred -cC--CCHHHHHHHHHHHHhcceee--ecCceEEEEeCC----ceEEEEEecC--cccceeeeccCEEEEccC--CcCC
Confidence 11 23577888888889899887 999999998753 2222222111 222225799999999999 4443
No 252
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.03 E-value=1.5e-05 Score=73.47 Aligned_cols=108 Identities=10% Similarity=0.118 Sum_probs=71.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+..... .+ + +.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~~----d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------DA----D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------CC----C-CCccCCHHHHHH
Confidence 358999999999999999999999999999987632100 00 0 001112345566
Q ss_pred HHHHHHhcC-CcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.+ +.+ +.++.|.+++.++ +.+.+.+.++. ....+|.||+|+| ..|+.
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g~-------~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSGQ-------SVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSSC-------CEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCCe-------EeccCCceEEeec--cCCcc
Confidence 666666664 665 8899999997654 55667776652 2334699999999 55654
No 253
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.03 E-value=3.9e-06 Score=80.85 Aligned_cols=41 Identities=29% Similarity=0.300 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
..+||+|||||++|+++|..|.+.|.+|+|+|+.+++||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 36899999999999999999999999999999999998854
No 254
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.02 E-value=2.1e-05 Score=72.22 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=71.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 3689999999999999999999999999999876321 01133444
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.++++ +.++.|.+++.++ +....|.+. ++ +. ..+.+|.||+|+| ..|+.
T Consensus 208 l~~~~~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~g----~~--~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 208 VERARANGTIDV--YLETEVASIEESN-GVLTRVHLRSSDG----SK--WTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SHHHHHHTSEEE--ESSEEEEEEEEET-TEEEEEEEEETTC----CE--EEEECSEEEECCC--BCCSC
T ss_pred HHHHhhcCceEE--EcCcCHHHhccCC-CceEEEEEEecCC----Ce--EEEeCCEEEECCC--CCCCH
Confidence 555556666665 8999999998764 121134443 32 22 5789999999999 45553
No 255
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=3.3e-05 Score=73.62 Aligned_cols=102 Identities=19% Similarity=0.255 Sum_probs=72.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ...++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITL-EDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCC-CCHHHHHH
Confidence 4689999999999999999999999999999876321 000 02344444
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
+.+.. .+++ +.++.|.+++.++ .+...+.+. ++.. .++.+|.||+|+| .+|+..
T Consensus 220 l~~~l---~v~i--~~~~~v~~i~~~~-~~~v~v~~~~~~G~~------~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSIL---KLNI--KFNSPVTEVKKIK-DDEYEVIYSTKDGSK------KSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHH---CCCE--ECSCCEEEEEEEE-TTEEEEEECCTTSCC------EEEEESCEEECCC--EEECCC
T ss_pred HHhcC---EEEE--EECCEEEEEEEcC-CCcEEEEEEecCCce------EEEEcCEEEECcC--CCcccc
Confidence 44433 2444 8899999998653 134556666 3321 5899999999999 566654
No 256
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.96 E-value=6.9e-06 Score=78.50 Aligned_cols=42 Identities=40% Similarity=0.529 Sum_probs=38.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCccccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKK 48 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~~~gg~~~~ 48 (396)
.+||+|||||++|+++|..|.+.|+ +|+|+|+.+.+||.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 5799999999999999999999998 89999999999986654
No 257
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.93 E-value=8.9e-06 Score=76.79 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=39.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 48 (396)
.+||+|||+|++|+++|..|++.|++|+++|+.+..||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 589999999999999999999999999999999999987654
No 258
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.92 E-value=9.7e-06 Score=74.61 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++||+|||||++|+++|+.|++.|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 5899999999999999999999999999999865
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.92 E-value=7.6e-05 Score=66.80 Aligned_cols=99 Identities=19% Similarity=0.159 Sum_probs=69.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. +.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------cc----HH
Confidence 4689999999999999999999999999999876310 00 12
Q ss_pred HHHHHHh-cCCcceeeeceEEEEEEEcCCCCce-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+.+ .++++ +.++.++++..++ +.. .+.+.+..+ |++ .++.+|.||+|+| ..|+.
T Consensus 185 ~~~~l~~~~gv~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 244 (310)
T 1fl2_A 185 LQDKLRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HNIELAGIFVQIG--LLPNT 244 (310)
T ss_dssp HHHHHHTCTTEEE--ESSEEEEEEEESS--SSEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhhCCCeEE--ecCCceEEEEcCC--CcEEEEEEEECCC-CcE--EEEEcCEEEEeeC--CccCc
Confidence 2333343 46555 8999999998653 332 356655322 232 5789999999999 45553
No 260
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.91 E-value=5.9e-06 Score=77.98 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+||+|||||++|+++|..|+++|++|+|+|+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999875
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.91 E-value=0.00012 Score=72.04 Aligned_cols=105 Identities=15% Similarity=0.080 Sum_probs=71.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||||..|+.+|..|++.|.+|+++++.. +. +. ...++.+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~--~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------RG--FDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------Cc--CCHHHHHH
Confidence 4589999999999999999999999999999862 11 00 12355667
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEc-----C--CCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYD-----E--ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~-----~--~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+..++.|+++ +.++.+..+... . ..+.+.+...... |++ ..+.+|.||+|+| .+|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~--g~~--~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD--GKK--FEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEETT--SCE--EEEEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeCC--CcE--EeccCCEEEEEeC--Ccccc
Confidence 777777778776 888888777542 1 1134444432111 221 3456999999999 56654
No 262
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.86 E-value=7.7e-05 Score=67.55 Aligned_cols=100 Identities=17% Similarity=0.142 Sum_probs=70.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. +.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~----~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------AS----TI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CC----HH
Confidence 4689999999999999999999999999999876321 01 12
Q ss_pred HHHHH-HhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYV-SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~-~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+ +..++++ +.++.|.+++.+. .....|.+.+..+ |+. .++.+|.||+|+| ..|+.
T Consensus 214 ~~~~l~~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 273 (338)
T 3itj_A 214 MQKRAEKNEKIEI--LYNTVALEAKGDG-KLLNALRIKNTKK-NEE--TDLPVSGLFYAIG--HTPAT 273 (338)
T ss_dssp HHHHHHHCTTEEE--ECSEEEEEEEESS-SSEEEEEEEETTT-TEE--EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhcCCeEE--eecceeEEEEccc-CcEEEEEEEECCC-Cce--EEEEeCEEEEEeC--CCCCh
Confidence 22223 3336665 8999999998764 2233366665221 222 6799999999999 45543
No 263
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.85 E-value=1.3e-05 Score=75.80 Aligned_cols=41 Identities=24% Similarity=0.312 Sum_probs=38.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 47 (396)
.+||+|||+|.+|+++|..|++.|.+|+++|+.+..||.+.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 58999999999999999999999999999999999998654
No 264
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.85 E-value=3e-05 Score=69.45 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=29.8
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++|||+|+.|+.+|..+++.|.+|+++++..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 58999999999999999999999999999765
No 265
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.85 E-value=6.8e-05 Score=67.49 Aligned_cols=100 Identities=21% Similarity=0.200 Sum_probs=68.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l--- 196 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY--- 196 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999876211 01222
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+.+.++++ +.+++|+++..++ .....+.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 197 -~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 254 (319)
T 3cty_A 197 -VQEIKKRNIPY--IMNAQVTEIVGDG-KKVTGVKYKDRTT-GEE--KLIETDGVFIYVG--LIPQT 254 (319)
T ss_dssp -HHHHHHTTCCE--ECSEEEEEEEESS-SSEEEEEEEETTT-CCE--EEECCSEEEECCC--EEECC
T ss_pred -HHHHhcCCcEE--EcCCeEEEEecCC-ceEEEEEEEEcCC-Cce--EEEecCEEEEeeC--CccCh
Confidence 22334567776 8999999998754 1122355542111 221 5799999999999 45553
No 266
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.83 E-value=8.1e-05 Score=66.89 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=70.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ... .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HH
Confidence 4689999999999999999999999999999876321 011 22
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~ 152 (396)
++...++.++++ +.++.|.+++.++ +...|.+.+..+ |+. .++.+|.||+|+| ..|+
T Consensus 196 ~~~~~~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 196 VETVKKKPNVEF--VLNSVVKEIKGDK--VVKQVVVENLKT-GEI--KELNVNGVFIEIG--FDPP 252 (323)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECCC--EECC
T ss_pred HHHHHhCCCcEE--EeCCEEEEEeccC--ceeEEEEEECCC-Cce--EEEEcCEEEEEEC--CCCC
Confidence 333333346555 8999999998753 444567665211 221 5799999999999 5565
No 267
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.83 E-value=6.5e-05 Score=67.83 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=67.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hHH---
Confidence 3689999999999999999999999999999876211 01 112
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+...++.++++ +.+++|+++..++ ....|.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 194 ~~~l~~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 194 QARAFANPKMKF--IWDTAVEEIQGAD--SVSGVKLRNLKT-GEV--SELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhcCCceE--ecCCceEEEccCC--cEEEEEEEECCC-CcE--EEEEcCEEEEccC--CCCCh
Confidence 222222346555 8899999998642 322455553111 222 5789999999999 55654
No 268
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.82 E-value=0.00013 Score=65.75 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=71.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ......
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~~-- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHSV-- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHHH--
Confidence 4689999999999999999999999999999876321 111111
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
..+++.++.+ +.++.|.++..++ +...|.+.+..+ |+. .++.+|.||+|+| ..|+.
T Consensus 197 --~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~ 252 (332)
T 3lzw_A 197 --ENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKG-DRK--EILEIDDLIVNYG--FVSSL 252 (332)
T ss_dssp --HHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTS-CCE--EEEECSEEEECCC--EECCC
T ss_pred --HHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCC-Cce--EEEECCEEEEeec--cCCCc
Confidence 2245567776 8899999998764 344566666332 222 6799999999999 55654
No 269
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.80 E-value=9.4e-06 Score=76.05 Aligned_cols=34 Identities=18% Similarity=0.471 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999887
No 270
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.79 E-value=8.9e-05 Score=66.40 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=67.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~-- 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL-- 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH--
Confidence 4689999999999999999999999999999876211 011122
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+...++.++++ +.++.+.++..++ ++...+.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 186 -~~l~~~~gv~v--~~~~~v~~i~~~~-~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 243 (311)
T 2q0l_A 186 -EHAKNNDKIEF--LTPYVVEEIKGDA-SGVSSLSIKNTAT-NEK--RELVVPGFFIFVG--YDVNN 243 (311)
T ss_dssp -HHHHTCTTEEE--ETTEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEECSEEEECSC--EEECC
T ss_pred -HHHhhCCCeEE--EeCCEEEEEECCC-CcEeEEEEEecCC-Cce--EEEecCEEEEEec--CccCh
Confidence 22222346554 8899999998753 1222355553111 222 5789999999999 55654
No 271
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.79 E-value=0.00013 Score=65.94 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=68.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999999876321 01111
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCce-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.++..++.++++ +.++.|.++..+.+.... .+.+.+... |+. .++.+|.||+|+| ..|+.
T Consensus 201 ~~~~~~~~gv~i--~~~~~v~~i~~~~~~~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 261 (333)
T 1vdc_A 201 QQRALSNPKIDV--IWNSSVVEAYGDGERDVLGGLKVKNVVT-GDV--SDLKVSGLFFAIG--HEPAT 261 (333)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESSSSSSEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhCCCeeE--ecCCceEEEeCCCCccceeeEEEEecCC-Cce--EEEecCEEEEEeC--Cccch
Confidence 122334456555 889999999875411022 255543211 222 6799999999999 55554
No 272
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.77 E-value=1.8e-05 Score=78.10 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=36.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5899999999999999999999999999999998777644
No 273
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.76 E-value=2.8e-05 Score=77.46 Aligned_cols=42 Identities=31% Similarity=0.349 Sum_probs=38.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~ 47 (396)
..++|+|||||++|+++|..|.+.|++|+|+|+.+.+||.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 358999999999999999999999999999999999988543
No 274
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.74 E-value=1.5e-05 Score=73.01 Aligned_cols=33 Identities=27% Similarity=0.534 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcC------CCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQS------IPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g------~~v~lie~~~ 40 (396)
+||+|||||++|+++|+.|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 59999999999999999999998 8999999875
No 275
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.72 E-value=2.4e-05 Score=71.50 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+++|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999886
No 276
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.72 E-value=3.5e-05 Score=78.30 Aligned_cols=41 Identities=32% Similarity=0.361 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccc
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~ 46 (396)
..++|+|||||++|+++|..|.++|++|+|+|+.+.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 35799999999999999999999999999999999998854
No 277
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.70 E-value=6.1e-05 Score=69.67 Aligned_cols=138 Identities=14% Similarity=0.117 Sum_probs=75.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHH--HHHHHh-c-ccccc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVM--LSRLVY-G-DLSKY 261 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~~~~~ 261 (396)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+... +.-.. ..+.+.....+... ...... + .....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~-~~~~~-------~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELR-AFGAG-------IYLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCC-CCSSE-------EEEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC-CCCce-------EEeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 4689999999999999999999999999999887321 10000 00000000000000 000000 0 00000
Q ss_pred CcCCCCCCcchhh-------hccCCccccCchhhhhhcCCCeEEccC--ceeEECC-eEEecCCcEEeCcEEEECCCCCC
Q 016069 262 GIHKPREGPFFMK-------AAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-EVIFENGHSHHFDSIVFCTGFKR 331 (396)
Q Consensus 262 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-~v~~~~g~~~~~D~vi~atG~~~ 331 (396)
.+..+ +..... ........+...+.+.+.+.+++++.+ ++.++.+ .|.+.||+++++|.||.|+|...
T Consensus 83 ~~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 83 ETWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred EEEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 00000 000000 000011223344455666678899877 7777643 57778899999999999999976
Q ss_pred Cc
Q 016069 332 ST 333 (396)
Q Consensus 332 ~~ 333 (396)
..
T Consensus 161 ~v 162 (379)
T 3alj_A 161 KV 162 (379)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 278
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.70 E-value=9.5e-05 Score=67.08 Aligned_cols=101 Identities=16% Similarity=0.205 Sum_probs=68.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. .. ..+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HHHH--
Confidence 4689999999999999999999999999999876321 00 0111
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~~ 154 (396)
....++.++++ +.++.|.+++.+. +...+.+.+... |+. .++.+|.||+|+| .+|+..
T Consensus 198 -~~~~~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~~ 255 (335)
T 2a87_A 198 -DRARNNDKIRF--LTNHTVVAVDGDT--TVTGLRVRDTNT-GAE--TTLPVTGVFVAIG--HEPRSG 255 (335)
T ss_dssp -HHHHHCTTEEE--ECSEEEEEEECSS--SCCEEEEEEETT-SCC--EEECCSCEEECSC--EEECCT
T ss_pred -HHHhccCCcEE--EeCceeEEEecCC--cEeEEEEEEcCC-Cce--EEeecCEEEEccC--CccChh
Confidence 12234456555 8899999998654 222344443111 221 6799999999999 566543
No 279
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.70 E-value=4.2e-05 Score=73.44 Aligned_cols=128 Identities=18% Similarity=0.195 Sum_probs=72.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccCcCC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHK 265 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (396)
..+|+|||+|++|+.+|..|++.|.+|+++++.+...-... ....+ .....+.........+ .+. .
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~--------~~~~~-~~~~~l~~~g~~~~~~---~~~--~ 157 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNV--------LHLWP-FTIHDLRALGAKKFYG---RFC--T 157 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCE--------EECCH-HHHHHHHTTTHHHHCT---TTT--C
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCc--------ccCCh-hHHHHHHHcCCccccc---ccc--c
Confidence 67899999999999999999999999999998873210000 00000 0000000000000000 000 0
Q ss_pred CCCCcchhhhccCCccccCchhhhhhcCCCeEEccC--ceeEECC-------eEEe--c-CC--cEEeCcEEEECCCCCC
Q 016069 266 PREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-------EVIF--E-NG--HSHHFDSIVFCTGFKR 331 (396)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~--v~~~~~~-------~v~~--~-~g--~~~~~D~vi~atG~~~ 331 (396)
..... .....+...+.+.+++.+++++.+ +++++.+ .|.+ . +| .++.+|.||.|+|..+
T Consensus 158 ~~~~~-------~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 158 GTLDH-------ISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp TTCCE-------EEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred ccccc-------CCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 00000 001222334455566678998887 8888642 3555 3 55 5789999999999987
Q ss_pred Ccc
Q 016069 332 STN 334 (396)
Q Consensus 332 ~~~ 334 (396)
...
T Consensus 231 ~~r 233 (497)
T 2bry_A 231 VPE 233 (497)
T ss_dssp CCT
T ss_pred ccc
Confidence 664
No 280
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.69 E-value=5.5e-05 Score=67.77 Aligned_cols=98 Identities=16% Similarity=0.147 Sum_probs=69.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. . ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~-~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------------------------AA-P---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------------------------SC-H---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------------------------CC-H---HH
Confidence 4689999999999999999999999999999876321 01 1 22
Q ss_pred HHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+....++.++++ +.++.|.++..+. +....+.+. ++ +. .++.+|.||+|+| ..|+.
T Consensus 189 ~~~~~~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~g----~~--~~~~~D~vv~a~G--~~p~~ 246 (315)
T 3r9u_A 189 VEKVKKNEKIEL--ITSASVDEVYGDK-MGVAGVKVKLKDG----SI--RDLNVPGIFTFVG--LNVRN 246 (315)
T ss_dssp HHHHHHCTTEEE--ECSCEEEEEEEET-TEEEEEEEECTTS----CE--EEECCSCEEECSC--EEECC
T ss_pred HHHHHhcCCeEE--EeCcEEEEEEcCC-CcEEEEEEEcCCC----Ce--EEeecCeEEEEEc--CCCCc
Confidence 333345566665 8899999998754 122224444 33 22 5799999999999 55554
No 281
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.64 E-value=5.4e-05 Score=69.00 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=32.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~ 42 (396)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 59999999999999999999999999999987643
No 282
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.63 E-value=6.7e-05 Score=69.94 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|++|+.+|..+++.|.+|+++++.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999887
No 283
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.62 E-value=7.6e-05 Score=66.96 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=29.8
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++|||+|+.|+.+|..|++.|.+|+++++..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 59999999999999999999999999998754
No 284
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.61 E-value=0.00015 Score=72.52 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=70.0
Q ss_pred CCeEEEEC--CChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG--~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+.... ......
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhH
Confidence 35799999 99999999999999999999999876432110 001123
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~ 152 (396)
..+.+.+++.++++ +.++.|++++.+ ...+..... ++. .++.+|.||+|+| ..|+
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~----~~~v~~~~~---~~~--~~i~aD~VV~A~G--~~p~ 625 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAG----GVTVRDTYA---SIE--RELECDAVVMVTA--RLPR 625 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETT----EEEEEETTT---CCE--EEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECC----eEEEEEccC---CeE--EEEECCEEEECCC--CCCC
Confidence 44555566778776 999999999743 222332211 111 6799999999999 4554
No 285
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.60 E-value=0.00032 Score=67.75 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=69.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (396)
..+|+|||+|..|+.+|..|++.+.+|+++++.+.+. .. ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 4689999999999999999999999999999876311 01 22
Q ss_pred HHHHHHh-cCCcceeeeceEEEEEEEcCCCCce-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 87 l~~~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
+.+.+.+ .++++ +.++.++.+..++ +.. .+.+.+..+ |+. .++.+|.|++|+| ..|+.
T Consensus 396 l~~~l~~~~gV~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~pn~ 455 (521)
T 1hyu_A 396 LQDKVRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HSVALAGIFVQIG--LLPNT 455 (521)
T ss_dssp HHHHHTTCTTEEE--ECSEEEEEEEECS--SSEEEEEEEETTT-CCE--EEEECSEEEECCC--EEESC
T ss_pred HHHHHhcCCCcEE--EeCCEEEEEEcCC--CcEEEEEEEeCCC-Cce--EEEEcCEEEECcC--CCCCc
Confidence 3333333 35555 8999999998653 332 355554322 232 5789999999999 45554
No 286
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.60 E-value=0.0002 Score=69.20 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..+++|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 4689999999999999999999999999999887
No 287
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.60 E-value=8.1e-05 Score=70.50 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999876
No 288
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.56 E-value=0.00024 Score=63.57 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+++|||||..|+.+|..|++.|.+|+++++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999765
No 289
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.44 E-value=0.00017 Score=70.01 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..+|+|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 290
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.41 E-value=0.00037 Score=64.80 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=73.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehh----hhHHHHHHhhcCChhhHHHHHHHHHHHHhccccccC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE----MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYG 262 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (396)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.. .+.. .......+++.+ .+.+.+.. . ........
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~-~~~~~~~~l~~~~~~~l~~~--g~~~~~~~----~-~~~~~~~~ 78 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE-RAINGADLLKPAGIRVVEAA--GLLAEVTR----R-GGRVRHEL 78 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC----CCCCEECHHHHHHHHHT--TCHHHHHH----T-TCEEECEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC-CccCceeeECchHHHHHHHc--CcHHHHHH----h-CCCcceeE
Confidence 47999999999999999999999999999988732 1000 000000010000 01111100 0 00000000
Q ss_pred -----------cCCCCCCcchhhhccCCccccCchhhhhhcCC-CeEEccC--ceeEECC------eEEecCCcEEeCcE
Q 016069 263 -----------IHKPREGPFFMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG--IESIRGN------EVIFENGHSHHFDS 322 (396)
Q Consensus 263 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~v~~~--v~~~~~~------~v~~~~g~~~~~D~ 322 (396)
+........ ..........+...+.+.+++. +++++.+ +++++.+ .+.+++|+++++|.
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 79 EVYHDGELLRYFNYSSVDAR-GYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEEETTEEEEEEETTSSCGG-GCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEeCCCCEEEecchHHhccc-CccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCE
Confidence 000000000 0000011223344455566665 8999877 7777543 45677888999999
Q ss_pred EEECCCCCCCc
Q 016069 323 IVFCTGFKRST 333 (396)
Q Consensus 323 vi~atG~~~~~ 333 (396)
||.|+|.....
T Consensus 158 vV~AdG~~s~v 168 (399)
T 2x3n_A 158 VVGADGIASYV 168 (399)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCCChHH
Confidence 99999987644
No 291
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.38 E-value=0.00021 Score=69.23 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHH-hhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLA-NHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~-~~g~~v~~~~r~~ 219 (396)
.+|+|||+|.+|+.+|..|+ +.|.+|+++++.+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8899999999876
No 292
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.37 E-value=0.00011 Score=71.09 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie~~~~ 41 (396)
.||+||||||++|+.+|.+|++ .+++|+|+|++..
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 6789999998753
No 293
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.36 E-value=0.00015 Score=70.59 Aligned_cols=35 Identities=40% Similarity=0.571 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+||||+|++|+.+|.+|++.|.+|+|+|+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999999999875
No 294
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.35 E-value=0.00077 Score=69.95 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=68.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (396)
.+++|||+|+.|+.+|..|.+.|.+|+|+++.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~~------ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------AA------ 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------HH------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------hh------
Confidence 689999999999999999999999999999876211 01
Q ss_pred HHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEee--cC--CCCceeeEEEEeCEEEEeecCCCCCCC
Q 016069 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN--LL--SPGRVIEEYYSGRFLVVASGETSNPFT 153 (396)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~--~~--~~g~~~~~~~~~d~vviAtG~~s~p~~ 153 (396)
.+.+++.++++ +.++.|.++..++++....|+..+ .. . |+. .++.+|.||+|+| .+|+.
T Consensus 323 ~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~-G~~--~~i~~D~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEAREL-GGT--QRFEADVLAVAGG--FNPVV 385 (965)
T ss_dssp HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCE-EEE--EEEECSEEEEECC--EEECC
T ss_pred HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCC-Cce--EEEEcCEEEECCC--cCcCh
Confidence 23356678777 999999999863111222344443 00 0 111 6799999999999 56654
No 295
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.35 E-value=0.0002 Score=69.97 Aligned_cols=45 Identities=20% Similarity=0.364 Sum_probs=40.9
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCccccc
Q 016069 4 QAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (396)
Q Consensus 4 ~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~ 48 (396)
.+.+||++|||+|..|..+|..|++.|.+|+++|+++..||-|..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 344699999999999999999999999999999999999997663
No 296
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.32 E-value=0.0006 Score=64.82 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|..|+-+|..|++.+.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4689999999999999999999999999999876
No 297
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.32 E-value=0.00017 Score=69.98 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..+|+|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999886
No 298
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.27 E-value=0.00058 Score=64.15 Aligned_cols=32 Identities=38% Similarity=0.523 Sum_probs=29.9
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 68999999999999999999999999999754
No 299
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.26 E-value=5.1e-05 Score=68.02 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=30.3
Q ss_pred eEEEEcCCCCHHHHHHHHHhh--cCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~--g~~v~~~~r~~ 219 (396)
.++|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999999 99999999876
No 300
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.25 E-value=6.7e-05 Score=73.22 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 4799999999999999999999999999998873
No 301
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.23 E-value=0.00081 Score=63.57 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~-v~lie~~~ 40 (396)
..+|+|||+|..|+-+|..|++.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999999998 99999876
No 302
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.22 E-value=0.00012 Score=72.55 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--------CCeEEEecCC-CC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS--------IPYVILEREN-CY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g--------~~v~lie~~~-~~ 42 (396)
.++|+|||||++|+++|+.|.+.| ++|+|+|+.+ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 8999999998 88
No 303
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.20 E-value=0.00069 Score=62.94 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=32.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999999999998873
No 304
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.20 E-value=0.0025 Score=60.39 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHH--------------------hcCC-CeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLS--------------------LQSI-PYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~--------------------~~g~-~v~lie~~~~ 41 (396)
..+++|||+|..|+-+|..|+ +.+. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5677 6999998763
No 305
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.19 E-value=0.00018 Score=70.15 Aligned_cols=144 Identities=15% Similarity=0.131 Sum_probs=73.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcC-ChhhHHHHHHH---HHHHHhccccccC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYV-PCGGVDTLMVM---LSRLVYGDLSKYG 262 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~ 262 (396)
-.|+|||+|..|+++|..+++.|.+|.++++++...-..... ...... ...+...+... +..........+.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cn----ps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCN----PAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSC----SEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCcc----ccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 479999999999999999999999999999874110000000 000000 00011111000 0000000001111
Q ss_pred cCCCCCCcchhhhc-cCCccccCchhhhhhcC-CCeEEccC-ceeEE--CC---eEEecCCcEEeCcEEEECCCCCCCcc
Q 016069 263 IHKPREGPFFMKAA-YGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGFKRSTN 334 (396)
Q Consensus 263 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~i~v~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (396)
......++...... ..-...+...+.+.+++ .+++++.. |+.+. .+ +|.+.+|.++.+|.||+|||..++..
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGV 183 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCE
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCc
Confidence 11111111100000 00011223344556666 58988766 77764 23 47788899999999999999876553
No 306
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.18 E-value=0.00014 Score=71.20 Aligned_cols=143 Identities=12% Similarity=0.173 Sum_probs=72.3
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCceeeehhhhHHHHHHhhcCC-hhhHHHHHHH---HHHHHhccccccC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP-CGGVDTLMVM---LSRLVYGDLSKYG 262 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~ 262 (396)
-.|+|||+|..|+++|..+++.|.+|.++++++...-..... .....+. ..+...+... ...........+.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cn----ps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCN----PAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSS----SEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccccc----ccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 479999999999999999999999999999874111000000 0000000 0011110000 0000000000111
Q ss_pred cCCCCCCcchhhhcc-CCccccCchhhhhhcC-CCeEEccC-ceeEE--CC---eEEecCCcEEeCcEEEECCCCCCCc
Q 016069 263 IHKPREGPFFMKAAY-GKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGFKRST 333 (396)
Q Consensus 263 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~i~v~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~ 333 (396)
......++....... .-...+...+.+.+++ .+++++.. |+.+. .+ +|.+.+|.++.+|.||+|||..+..
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 111111111000000 0001223334556666 68998766 77774 33 4677788889999999999987654
No 307
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.18 E-value=0.00019 Score=69.54 Aligned_cols=35 Identities=37% Similarity=0.473 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~ 42 (396)
.+|+||||||++|+.+|.+|++ +.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998654
No 308
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.18 E-value=0.001 Score=62.90 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~-v~lie~~~ 40 (396)
..+|+|||||..|+-+|..+.+.|.+ |+++++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 46899999999999999999999985 99999876
No 309
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.13 E-value=0.00071 Score=61.14 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999886
No 310
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.11 E-value=0.0002 Score=70.02 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.-.|+|||+|..|+++|..+++.|.+|.++++.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3579999999999999999999999999999874
No 311
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.10 E-value=0.00034 Score=68.15 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~~ 41 (396)
.||+||||||.||+.+|.+|++.+ .+|+|+|+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 589999999999999999999987 69999999875
No 312
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.09 E-value=0.00087 Score=66.84 Aligned_cols=29 Identities=34% Similarity=0.407 Sum_probs=25.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEE
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVI 35 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~l 35 (396)
..+|+|||||..|+.+|..|++.|.++++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999998877664
No 313
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.08 E-value=0.00058 Score=61.57 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh--cCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~--g~~v~~~~r~~ 219 (396)
..++|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4699999999999999999998 99999999886
No 314
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.08 E-value=0.0015 Score=65.75 Aligned_cols=104 Identities=10% Similarity=0.026 Sum_probs=67.7
Q ss_pred CCeEEEEC--CChHHHHHHHHHHhcCCCeEEEecCCCCCcccccCCcCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016069 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (396)
Q Consensus 7 ~~~vvIIG--~G~aGl~~A~~L~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (396)
..+|+||| ||..|+.+|..|++.|.+|+++++.+ +..... + . .. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~-----------------~---------~--~~----~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH-----------------F---------T--LE----Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH-----------------H---------T--TC----H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc-----------------c---------c--cc----H
Confidence 46899999 99999999999999999999999876 321000 0 0 01 1
Q ss_pred HHHHHHHHhcCCcceeeeceEEEEEEEcCCCCceEEEEe--ecCC-------------CCceeeEEEEeCEEEEeecCCC
Q 016069 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLS-------------PGRVIEEYYSGRFLVVASGETS 149 (396)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~-------------~g~~~~~~~~~d~vviAtG~~s 149 (396)
..+.+..++.|+++ +.++.|++++.+ ...+... ++.. ++++ .++.+|.||+|+| .
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~aD~Vv~a~G--~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSH--RWIEFDSLVLVTG--R 644 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCC--EEEECSEEEEESC--E
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcc--eeeeCCEEEECCC--C
Confidence 33444456668776 999999988732 2223321 1100 0111 3589999999999 5
Q ss_pred CCCC
Q 016069 150 NPFT 153 (396)
Q Consensus 150 ~p~~ 153 (396)
.|+.
T Consensus 645 ~p~~ 648 (729)
T 1o94_A 645 HSEC 648 (729)
T ss_dssp EECC
T ss_pred CCCh
Confidence 5543
No 315
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.06 E-value=0.00076 Score=62.72 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+|+|||+|++|+-+|..|++.|.+|++++|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999877
No 316
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.05 E-value=0.00031 Score=65.52 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5689999999999999999999999999999987
No 317
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.02 E-value=0.00041 Score=64.98 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999886
No 318
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.01 E-value=0.0028 Score=59.27 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999864
No 319
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.00 E-value=0.00048 Score=67.06 Aligned_cols=34 Identities=38% Similarity=0.589 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~ 40 (396)
.||+||||||.||+.+|.+|++. +.+|+|+|+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 58999999999999999999975 78999999877
No 320
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.00 E-value=0.0033 Score=59.48 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--------------------CC-CeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--------------------SI-PYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--------------------g~-~v~lie~~~~ 41 (396)
..+|+|||+|..|+-+|..|.+. +. +|+++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 46899999999999999999874 54 8999998763
No 321
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.00 E-value=0.0025 Score=62.21 Aligned_cols=34 Identities=35% Similarity=0.610 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3479999999999999999999999999999877
No 322
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.99 E-value=0.00066 Score=65.26 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA 43 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~g 43 (396)
.+|++|||+|++|+.+|.+|.+.|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999999999999999999999999999887443
No 323
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.98 E-value=0.00045 Score=67.62 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.9
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4689999999999999999999999999999885
No 324
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.98 E-value=0.0031 Score=58.34 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999887
No 325
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.95 E-value=0.0022 Score=62.49 Aligned_cols=33 Identities=36% Similarity=0.604 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 469999999999999999999999999999877
No 326
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.92 E-value=0.00071 Score=65.07 Aligned_cols=35 Identities=29% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~ 41 (396)
.+|++|||+|++|+.+|.+|.+.+.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999999999999999999999999999998753
No 327
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.88 E-value=0.00082 Score=61.02 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~---~g~~v~~~~r~~ 219 (396)
.+|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 899999999875
No 328
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.88 E-value=0.0011 Score=52.74 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=32.9
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+......+|+|+|+|..|..+|..|.+.|.+|+++|+.+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4444456789999999999999999999999999999865
No 329
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.86 E-value=0.00047 Score=66.98 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie~~~~~ 42 (396)
.||+||||||.||+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999987644
No 330
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.86 E-value=0.0039 Score=57.82 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999986
No 331
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.82 E-value=0.0069 Score=63.31 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
..+|+|||||..|+-+|..+.+.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3589999999999999999999996 899999875
No 332
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.82 E-value=0.00082 Score=64.74 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999886
No 333
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.80 E-value=0.001 Score=65.07 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~-~g~~v~lie~~~~ 41 (396)
.+|++|||+|++|+.+|.+|++ .+.+|+|+|+...
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 5899999999999999999999 7999999998754
No 334
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.80 E-value=0.0023 Score=58.93 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 335
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.79 E-value=0.0017 Score=54.58 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=32.9
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 183 ~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
++.+++++|||+|.+|..-+..|.+.|++|+++.+..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3458999999999999999999999999999997543
No 336
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.78 E-value=0.0024 Score=61.87 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 337
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.71 E-value=0.00021 Score=68.57 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
...|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 45 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE 45 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 45799999999999999999999999999999873
No 338
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.70 E-value=0.00019 Score=68.97 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecCc
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 220 (396)
...|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~ 46 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 45799999999999999999999999999999873
No 339
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.68 E-value=0.0012 Score=64.04 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~~~ 42 (396)
.+|++|||+|++|+.+|.+|++. +.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 58999999999999999999998 8999999987643
No 340
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.63 E-value=0.0019 Score=58.97 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999885
No 341
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.60 E-value=0.0041 Score=58.79 Aligned_cols=33 Identities=33% Similarity=0.507 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 369999999999999999999999999999887
No 342
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.53 E-value=0.002 Score=59.31 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3579999999999999999999999999999875
No 343
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.43 E-value=0.0071 Score=59.01 Aligned_cols=34 Identities=29% Similarity=0.592 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...++|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3579999999999999999999999999999876
No 344
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.43 E-value=0.0027 Score=58.26 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+.|+|||+|.+|+-+|..|+ .|.+|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 578999999999999999999 599999999875
No 345
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.41 E-value=0.0036 Score=58.07 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh-hc-CceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLAN-HA-AKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~-~g-~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++ .| .+|+++++.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3579999999999999999999 99 8999999876
No 346
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.39 E-value=0.00026 Score=65.67 Aligned_cols=33 Identities=36% Similarity=0.457 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999987
No 347
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.34 E-value=0.006 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+.+|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999875
No 348
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.32 E-value=0.0047 Score=47.96 Aligned_cols=34 Identities=15% Similarity=0.324 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+++|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3589999999999999999999999999999865
No 349
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.27 E-value=0.011 Score=58.89 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4689999999999999999999999999999863
No 350
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.27 E-value=0.016 Score=55.60 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
-.|+|||+|..|+-+|..+++.|.+|+++++.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 469999999999999999999999999999887
No 351
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.19 E-value=0.0021 Score=61.53 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=30.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+++|||+|..|+.+|..|++. .+|+++++.+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 4799999999999999999999 9999999887
No 352
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.18 E-value=0.0027 Score=61.52 Aligned_cols=34 Identities=38% Similarity=0.579 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999987
No 353
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.04 E-value=0.0051 Score=61.48 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999864
No 354
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.96 E-value=0.0078 Score=46.38 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|+|||+|..|..+|..|.+.|.+|+++|+..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 355
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.93 E-value=0.011 Score=46.52 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+.+++|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999863
No 356
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.93 E-value=0.0082 Score=58.68 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh------cCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANH------AAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~------g~~v~~~~r~~ 219 (396)
-.|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4699999999999999999999 99999999886
No 357
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.81 E-value=0.041 Score=53.18 Aligned_cols=32 Identities=34% Similarity=0.703 Sum_probs=29.9
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
-.|+|||+|.+|+-+|..+++ |.+|+++++.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 369999999999999999999 99999999887
No 358
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.77 E-value=0.01 Score=60.71 Aligned_cols=33 Identities=18% Similarity=0.458 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcC-ceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~-~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|. +|+++++.+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 579999999999999999999998 999999876
No 359
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.74 E-value=0.058 Score=51.54 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~ 40 (396)
.++|+|||+|.+|+.++..|++. +.+|+++-+.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 46899999999999999999875 67899998876
No 360
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.68 E-value=0.011 Score=52.58 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+++. ..+|.|||+|..|...|..++..|++|+++|..+
T Consensus 1 Ma~p~-~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPA-AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCC-CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 55543 4689999999999999999999999999999865
No 361
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.67 E-value=0.011 Score=43.97 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~ 40 (396)
.++|+|+|+|..|..++..|.+.| .+|+++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999864
No 362
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.59 E-value=0.014 Score=45.18 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+|+|+|+|..|..+|..|.+.|.+|+++|+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 363
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.43 E-value=0.089 Score=51.36 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
-.|+|||+|.+|+-+|..+++.|.+|+++++.+
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 369999999999999999999999999999876
No 364
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.40 E-value=0.034 Score=52.72 Aligned_cols=30 Identities=23% Similarity=0.548 Sum_probs=28.8
Q ss_pred EEEEcCCCCHHHHHHHHHhhcCceEEEEec
Q 016069 189 VLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (396)
Q Consensus 189 i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~ 218 (396)
++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 2 VvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 2 IYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 799999999999999999999999999987
No 365
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.30 E-value=0.0056 Score=60.58 Aligned_cols=33 Identities=33% Similarity=0.565 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHh-hcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLAN-HAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~-~g~~v~~~~r~~ 219 (396)
..|+|||+|++|+-+|..|++ .|.+|+++++.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 999999999887
No 366
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.29 E-value=0.0082 Score=51.93 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=30.5
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.|+|||+|++|+-+|..|++.|.+|+++++++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 367
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.26 E-value=0.16 Score=49.60 Aligned_cols=32 Identities=28% Similarity=0.520 Sum_probs=30.2
Q ss_pred eEEEEcCCCCHHHHHHHHHhhc--CceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHA--AKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g--~~v~~~~r~~ 219 (396)
.|+|||+|..|+-+|..|++.| .+|+++++.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 5999999999999999999999 9999999875
No 368
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.05 E-value=0.03 Score=45.52 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~~v~lie~~~ 40 (396)
..+|+|+|+|..|..+|..|.+. |++|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999865
No 369
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.98 E-value=0.025 Score=50.51 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+.. ...+|.|||+|..|.+.|..|++.|++|+++|+.+
T Consensus 1 m~~~-~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 1 MASP-AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCC-CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5443 24689999999999999999999999999999875
No 370
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.96 E-value=0.021 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999865
No 371
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.85 E-value=0.025 Score=50.20 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=31.9
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+.....++|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5544445789999999999999999999999999999865
No 372
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.62 E-value=0.035 Score=49.73 Aligned_cols=33 Identities=36% Similarity=0.399 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|.|||+|..|.-++..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999998875
No 373
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.47 E-value=0.042 Score=49.37 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
+++|+|||+|..|.++|..|+..|+ +|+|+|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999988 999999865
No 374
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.44 E-value=0.05 Score=48.30 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..++|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999865
No 375
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.39 E-value=0.046 Score=48.69 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=30.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|.|||+|..|.-++..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998865
No 376
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.31 E-value=0.036 Score=52.21 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 184 ~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+++++++|||+|.+|...+..|.+.|++|+++....
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 347899999999999999999999999999998643
No 377
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.29 E-value=0.053 Score=45.51 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
...|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4689999999999999999999999999999754
No 378
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.26 E-value=0.033 Score=49.78 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 185 ~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...+|.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4679999999999999999999999999998 655
No 379
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.19 E-value=0.044 Score=49.02 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 380
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.19 E-value=0.018 Score=55.11 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
|+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999865
No 381
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.18 E-value=0.049 Score=48.24 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+|.|||+|..|...|..|++.|++|+++|+..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 382
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.12 E-value=0.039 Score=43.46 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=33.1
Q ss_pred CCCCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 182 KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 182 ~~~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
....+.+++|+|+|..|..++..|...|.+|+++.|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 33447899999999999999999999999999999887
No 383
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.05 E-value=0.058 Score=47.31 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+|.|||+|..|...|..|++.|++|+++|+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999999865
No 384
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.03 E-value=0.057 Score=49.07 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|++.|.+|+++++.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 385
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.96 E-value=0.058 Score=48.60 Aligned_cols=33 Identities=33% Similarity=0.352 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~ 39 (396)
.++|.|||+|..|.+.|..|.+.|.+|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 386
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.96 E-value=0.093 Score=49.39 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 184 ~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+.++++.|+|.|.+|+-+|..|.+.|.+|+...+++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 458999999999999999999999999999998765
No 387
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.84 E-value=0.068 Score=48.13 Aligned_cols=40 Identities=20% Similarity=0.150 Sum_probs=32.9
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+..+...+|.|||.|..|-+.|..|.+.|++|+++|+.+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6655556789999999999999999999999999999865
No 388
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.81 E-value=0.054 Score=48.39 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
.+++|+|||+|..|.++|..|...+. +++++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999999887 899999754
No 389
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.81 E-value=0.051 Score=48.43 Aligned_cols=33 Identities=33% Similarity=0.397 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999865
No 390
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.72 E-value=0.061 Score=47.14 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 369999999999999999999999999999876
No 391
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.66 E-value=0.062 Score=48.83 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
..+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999999999 999999874
No 392
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.66 E-value=0.068 Score=50.30 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|.+|+++|+.|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4789999999999999999999999999999864
No 393
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.64 E-value=0.071 Score=44.38 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 394
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.63 E-value=0.067 Score=47.74 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|++.|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999865
No 395
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.61 E-value=0.033 Score=51.10 Aligned_cols=32 Identities=38% Similarity=0.493 Sum_probs=30.4
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.|+|||+|++|+-+|..|++.|.+|++++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999999876
No 396
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.59 E-value=0.065 Score=47.10 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 578999999999999999999 999999999865
No 397
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.57 E-value=0.054 Score=46.97 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+.|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5789999999999999999999999999999864
No 398
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.54 E-value=0.065 Score=47.28 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 399
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.53 E-value=0.076 Score=48.74 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 400
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.52 E-value=0.039 Score=52.03 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|+|+|+|-.|..+|..|...|++|+++|+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4799999999999999999999999999999865
No 401
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.52 E-value=0.058 Score=50.62 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~~ 42 (396)
.++|.|||.|.+|+++|+.|.++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 468999999999999999999999999999976543
No 402
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.51 E-value=0.14 Score=45.84 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=30.7
Q ss_pred CCeEEEEcCCCCHHH-HHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGME-IALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e-~a~~l~~~g~~v~~~~r~~ 219 (396)
.+++.|||.|-+|+. +|..|.+.|.+|++.++++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 578999999999997 8888999999999998775
No 403
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.48 E-value=0.07 Score=47.62 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
.++|+|||+|..|..+|..|.+.|. +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999999998 899999864
No 404
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.48 E-value=0.067 Score=49.71 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|..|+..|..|++ |++|+++|+..
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4689999999999999999998 99999999865
No 405
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.37 E-value=0.04 Score=51.54 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 406
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.26 E-value=0.075 Score=50.35 Aligned_cols=34 Identities=29% Similarity=0.542 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|+..|..|++.|++|+++|+..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4799999999999999999999999999999764
No 407
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.26 E-value=0.073 Score=47.00 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~ 41 (396)
.++|.|||.|..|...|..|.+.|++|+++|+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998763
No 408
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.21 E-value=0.047 Score=49.93 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+.++|||+|..|+++|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999876
No 409
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.19 E-value=0.062 Score=46.62 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 184 ~~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..+++++|||+|.+|..-+..|.+.|++|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 358999999999999999999999999999998654
No 410
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.14 E-value=0.085 Score=47.86 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~ 39 (396)
..+|+|+|+|.+|..+|+.|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5799999999999999999999998 79999987
No 411
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.09 E-value=0.083 Score=46.89 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999864
No 412
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.08 E-value=0.1 Score=44.66 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|.+.|++|+++++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4789999999999999999999999999999865
No 413
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.07 E-value=0.079 Score=48.17 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|..|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 414
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.99 E-value=0.087 Score=49.49 Aligned_cols=33 Identities=21% Similarity=0.504 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|+..|..|++.|++|+++|+..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999865
No 415
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.99 E-value=0.099 Score=46.47 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 416
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.98 E-value=0.051 Score=42.15 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999998999999864
No 417
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.95 E-value=0.12 Score=43.19 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 418
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.91 E-value=0.11 Score=46.40 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
.++|+|||+|..|..+|..|+..|+ +|+|+|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999988 899999764
No 419
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.85 E-value=0.054 Score=45.95 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=29.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 6 ~~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
...+++|+|+|..|..+|..|.+.|+ |+++|+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35689999999999999999999999 99999865
No 420
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.80 E-value=0.11 Score=48.08 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||.|..|..+|..|.+.|++|+++|..+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4679999999999999999999999999999765
No 421
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.76 E-value=0.13 Score=48.20 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+|.|||+|..|...|..|++.|++|+++|+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 689999999999999999999999999999875
No 422
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.66 E-value=0.072 Score=49.04 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999876
No 423
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.62 E-value=0.13 Score=46.20 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
+++|.|||+|..|.++|..|+..|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999865
No 424
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.60 E-value=0.059 Score=47.86 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.4
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.+|+|||+|..|.-++..|+ .|.+|+++.|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 899999998876
No 425
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.59 E-value=0.11 Score=40.72 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5789999999999999999999999999999875
No 426
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.59 E-value=0.14 Score=45.43 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=32.0
Q ss_pred CCCCCCCCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCCC
Q 016069 1 MKEQAAGVEVIIVGA-GPSGLATAACLSLQSIPYVILERENC 41 (396)
Q Consensus 1 M~~~~~~~~vvIIG~-G~aGl~~A~~L~~~g~~v~lie~~~~ 41 (396)
|+.....+.|+|.|| |+.|..++..|.+.|++|+++++...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 443333578999999 99999999999999999999998653
No 427
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.51 E-value=0.11 Score=45.47 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999875
No 428
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.50 E-value=0.068 Score=49.04 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHHhh--cCceEEEEecCc
Q 016069 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVIRSPV 220 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~--g~~v~~~~r~~~ 220 (396)
+|+|||+|.+|+-+|..|++. |.+|+++++.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 699999999999999999999 999999998763
No 429
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.50 E-value=0.074 Score=47.30 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-----C-CCeEEEec
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-----S-IPYVILER 38 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-----g-~~v~lie~ 38 (396)
+++|.|||+|..|...|..|.+. | .+|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999998 9 99999987
No 430
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.47 E-value=0.11 Score=44.62 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
.+|+|||+|-.|..+|..|++.|. +++|+|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999998 899999864
No 431
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.42 E-value=0.12 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|.+|+++++..
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 432
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.40 E-value=0.12 Score=46.39 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999864
No 433
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.40 E-value=0.11 Score=45.02 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~-v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|++ |.++++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999998 88998764
No 434
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.36 E-value=0.14 Score=45.44 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~ 39 (396)
..+|.|||+|..|.++|..|+..|+ +++++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 435
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.30 E-value=0.17 Score=44.12 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|+|.|+|+.|..++..|.+.|++|+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3689999999999999999999999999999865
No 436
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.29 E-value=0.12 Score=48.87 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CC-CeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQ-SI-PYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~-g~-~v~lie~~~~ 41 (396)
.++|.|||+|..|+..|..|++. |+ +|+++|+...
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999998764
No 437
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.28 E-value=0.13 Score=45.60 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
++|+|||+|..|.++|..|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999864
No 438
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.18 E-value=0.13 Score=45.94 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999999865
No 439
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.18 E-value=0.088 Score=48.77 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=31.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCc-eEEEEecCc
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAK-TSLVIRSPV 220 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~-v~~~~r~~~ 220 (396)
.+|+|||+|.+|+-+|..|++.|.+ |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 5799999999999999999999999 999999873
No 440
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.17 E-value=0.13 Score=45.60 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|. .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999865
No 441
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.15 E-value=0.15 Score=48.33 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3589999999999999999999999999999865
No 442
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.15 E-value=0.063 Score=48.88 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999875
No 443
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.07 E-value=0.15 Score=46.29 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~ 41 (396)
++|+|||||..|..+++.+.+.|++++++|..+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4899999999999999999999999999997653
No 444
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.07 E-value=0.14 Score=47.87 Aligned_cols=35 Identities=26% Similarity=0.499 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~~ 41 (396)
..++.|||.|..|+..|..|++.|++|+++|+...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998764
No 445
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.05 E-value=0.079 Score=50.50 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+.+|+|||+|.+|+.+|..|++.|.+|+++++++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 6789999999999999999999999999998765
No 446
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.99 E-value=0.081 Score=48.46 Aligned_cols=33 Identities=39% Similarity=0.499 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 469999999999999999999999999999875
No 447
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.99 E-value=0.076 Score=49.36 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=30.3
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 69999999999999999999999999999875
No 448
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.98 E-value=0.16 Score=42.12 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.7
Q ss_pred eEEEEC-CChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 9 EVIIVG-AGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 9 ~vvIIG-~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+|.||| +|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 449
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.96 E-value=0.11 Score=46.81 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCceEEEEec
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~ 218 (396)
.+|.|||+|..|.-+|..|++.|.+|+++.|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999875
No 450
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.95 E-value=0.16 Score=47.82 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|.|||+|..|...|..|++.|++|+++|+..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999865
No 451
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.89 E-value=0.12 Score=45.24 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 379999999999999999999999999999875
No 452
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.89 E-value=0.15 Score=47.10 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|.+|+.+|..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999865
No 453
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.80 E-value=0.11 Score=47.24 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
...|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3579999999999999999999999999999864
No 454
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.80 E-value=0.16 Score=44.23 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|+|.|+|+.|..++..|.++|++|+++.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999999865
No 455
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.72 E-value=0.21 Score=44.36 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|.+|+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.71 E-value=0.18 Score=44.87 Aligned_cols=39 Identities=31% Similarity=0.526 Sum_probs=32.1
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
|+... ..+|+|||+|..|.++|..|...+. +++++|...
T Consensus 1 m~~~~-~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNNG-GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTTT-SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCC-CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 55432 4699999999999999999988775 799999764
No 457
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.66 E-value=0.092 Score=44.07 Aligned_cols=34 Identities=32% Similarity=0.398 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEE-EecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVI-LEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~l-ie~~~ 40 (396)
.++|.|||+|..|.+.|..|.+.|++|++ +++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 36899999999999999999999999999 77754
No 458
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.65 E-value=0.13 Score=48.15 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|+..|..|++.|++|+++|+..
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999764
No 459
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.64 E-value=0.17 Score=48.00 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+++|.|||.|..|.+.|..|.+.|++|+++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 460
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.60 E-value=0.17 Score=45.16 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=29.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|++.|.+|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 543
No 461
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.60 E-value=0.14 Score=45.86 Aligned_cols=31 Identities=29% Similarity=0.222 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEec
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILER 38 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~ 38 (396)
++|.|||+|..|...|..|.+.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999998
No 462
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.58 E-value=0.18 Score=46.21 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|||+|.+|+.++..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 463
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.56 E-value=0.2 Score=44.72 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
..+|.|||+|..|.++|..|+..++ +++|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999988 999999865
No 464
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.54 E-value=0.15 Score=45.35 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~ 39 (396)
.++|.|||.|..|...|..|.+.|+ +|+++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999985
No 465
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.52 E-value=0.18 Score=45.00 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
..+|.|||+|..|.++|..|+..++ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4789999999999999999999887 899999753
No 466
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.49 E-value=0.16 Score=44.92 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|++|+++|+..
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999999865
No 467
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.47 E-value=0.2 Score=44.81 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHH-HHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLA-TAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~-~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|.+|++ +|..|.++|++|++.|...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999996 7888999999999999875
No 468
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.39 E-value=0.12 Score=39.78 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++++|+|.|..|..++..|.+.|.+|+++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5789999999999999999999999999999887
No 469
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.33 E-value=0.12 Score=48.32 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcC-ceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~-~v~~~~r~~ 219 (396)
...|+|||+|..|+-+|..|++.|. +|+++++.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3579999999999999999999999 999999876
No 470
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.28 E-value=0.21 Score=46.51 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|.|||.|..|+.+|..|+++|++|+.+|...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999765
No 471
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.23 E-value=0.23 Score=42.92 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+++|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999998999999875
No 472
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.18 E-value=0.2 Score=44.43 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~--g~~v~lie~~~ 40 (396)
++|+|||+|..|.++|..|++. +.+|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999985 67999999865
No 473
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.16 E-value=0.18 Score=44.89 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g-~~v~lie~~~ 40 (396)
.++|.|||.|..|...|..|.+.| ++|+++|+..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999875
No 474
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.15 E-value=0.24 Score=44.12 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
..+|.|||+|..|.++|..|+..++ +++++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999888 899999865
No 475
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.15 E-value=0.17 Score=45.06 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|.+.|+ +|+++|+..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999998 899999864
No 476
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.11 E-value=0.25 Score=43.23 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=30.8
Q ss_pred CeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGA-GPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~-G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+ |..|...|..|.+.|++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999764
No 477
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.09 E-value=0.24 Score=41.14 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=30.1
Q ss_pred CeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGA-GPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~-G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|+|.|| |..|..++..|.+.|++|+++.+..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999999875
No 478
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.05 E-value=0.2 Score=44.56 Aligned_cols=33 Identities=36% Similarity=0.565 Sum_probs=29.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~ 39 (396)
.++|+|||+|..|.++|..|...+. +++++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4799999999999999999998875 79999875
No 479
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.02 E-value=0.22 Score=43.39 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++|+|.|+|.+|..++..|.+.|.+|+.+.|++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999999886
No 480
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.02 E-value=0.14 Score=46.18 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=30.0
Q ss_pred eEEEEcCCCCHHHHHHHHHhhc------CceEEEEecC
Q 016069 188 NVLVVGSGNSGMEIALDLANHA------AKTSLVIRSP 219 (396)
Q Consensus 188 ~i~VvG~G~~g~e~a~~l~~~g------~~v~~~~r~~ 219 (396)
.|+|||+|.+|+-+|..|++.| .+|+++++.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999875
No 481
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=90.97 E-value=0.25 Score=43.83 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=31.5
Q ss_pred CCCCCCCCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 1 MKEQAAGVEVIIVGA-GPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 1 M~~~~~~~~vvIIG~-G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
|+.......|+|+|| |..|..++..|.+.|++|+++.+..
T Consensus 5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp ----CCCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred ccccCCCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 333333357999997 9999999999999999999999875
No 482
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.96 E-value=0.12 Score=47.91 Aligned_cols=34 Identities=15% Similarity=0.426 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc-CceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g-~~v~~~~r~~ 219 (396)
..+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 568999999999999999999999 8999999765
No 483
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.92 E-value=0.22 Score=45.14 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||.|..|...|..|.+.|++|+++|+..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 484
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.91 E-value=0.22 Score=43.36 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|.+.|..|.+.|++|+++++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999998764
No 485
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.91 E-value=0.25 Score=43.06 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC---CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI---PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~---~v~lie~~~ 40 (396)
.++|.|||+|..|.+.|..|.+.|+ +|+++|+..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3689999999999999999999998 899999875
No 486
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.90 E-value=0.25 Score=44.94 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
..+|+|+|+|.+|..++..|...|.+|+++|+.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 487
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=90.90 E-value=0.11 Score=49.15 Aligned_cols=33 Identities=33% Similarity=0.511 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcC--ceEEEEecC
Q 016069 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVIRSP 219 (396)
Q Consensus 187 ~~i~VvG~G~~g~e~a~~l~~~g~--~v~~~~r~~ 219 (396)
++|+|||+|.+|+-+|..|++.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 579999999999999999999998 999999754
No 488
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.88 E-value=0.14 Score=39.38 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~~ 219 (396)
.++++|+|.|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999876
No 489
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.84 E-value=0.068 Score=45.07 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERE 39 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~ 39 (396)
.++|.|||.|..|.+.|..|.+.|++|+.+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 579999999999999999999999999999874
No 490
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.83 E-value=0.2 Score=44.11 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.++|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999764
No 491
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.81 E-value=0.25 Score=43.85 Aligned_cols=33 Identities=30% Similarity=0.439 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~-~v~lie~~~ 40 (396)
++|+|||+|..|..+|..|+..|. +++++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999886 899999764
No 492
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.79 E-value=0.13 Score=46.89 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCceEEEEec
Q 016069 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (396)
Q Consensus 185 ~~~~i~VvG~G~~g~e~a~~l~~~g~~v~~~~r~ 218 (396)
.+.+|+|||+|.+|+-+|..|.+.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 3679999999999999999999999999999988
No 493
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.78 E-value=0.22 Score=43.71 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 9 ~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999865
No 494
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.77 E-value=0.22 Score=42.85 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC----CCeEEEecCCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQS----IPYVILERENC 41 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g----~~v~lie~~~~ 41 (396)
.++|.|||+|..|.+.|..|.+.| .+|+++++...
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 358999999999999999999988 68999998763
No 495
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.77 E-value=0.26 Score=42.80 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
.+.++|+|+|-+|.++|..|.+.|.+|+++++..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998764
No 496
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.75 E-value=0.22 Score=44.05 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=30.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 016069 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (396)
Q Consensus 7 ~~~vvIIG~G~aGl~~A~~L~~~g~--~v~lie~~~ 40 (396)
..+|.|||+|..|.++|..|...++ +++|+|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999888 899999864
No 497
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.71 E-value=0.12 Score=38.10 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=30.9
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc-CceEEEEecC
Q 016069 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (396)
Q Consensus 186 ~~~i~VvG~G~~g~e~a~~l~~~g-~~v~~~~r~~ 219 (396)
.++++|+|+|.+|..++..|...| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 568999999999999999999999 7899998876
No 498
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.69 E-value=0.19 Score=46.44 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=29.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
++|.|||+|..|+..|..|++ |++|+++|+..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 499
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.68 E-value=0.16 Score=46.19 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=30.1
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 9 ~vvIIG~G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+|.|||+|..|.+.|..|.+.|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999764
No 500
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.66 E-value=0.3 Score=39.96 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=30.7
Q ss_pred CeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 016069 8 VEVIIVGA-GPSGLATAACLSLQSIPYVILEREN 40 (396)
Q Consensus 8 ~~vvIIG~-G~aGl~~A~~L~~~g~~v~lie~~~ 40 (396)
+.|+|.|| |..|..++..|.++|.+|+++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999865
Done!