Query 016072
Match_columns 396
No_of_seqs 139 out of 1118
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:32:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016072.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016072hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02611 glutamate--cysteine l 100.0 2.2E-94 4.9E-99 724.4 40.3 396 1-396 87-482 (482)
2 TIGR01436 glu_cys_lig_pln glut 100.0 4.9E-89 1.1E-93 684.5 39.4 395 2-396 42-446 (446)
3 COG3572 GshA Gamma-glutamylcys 100.0 5.4E-77 1.2E-81 565.3 32.8 392 4-396 56-456 (456)
4 TIGR03444 gshA_related glutama 100.0 3.4E-73 7.4E-78 554.4 30.4 326 32-373 58-389 (390)
5 PRK13516 gamma-glutamyl:cystei 100.0 1.9E-64 4.1E-69 499.5 26.6 312 35-395 47-370 (373)
6 PRK13518 carboxylate-amine lig 100.0 1.7E-62 3.7E-67 480.1 25.8 297 35-391 48-356 (357)
7 PRK13517 carboxylate-amine lig 100.0 3.6E-62 7.7E-67 486.2 27.3 309 35-395 46-370 (373)
8 PRK13515 carboxylate-amine lig 100.0 5.1E-60 1.1E-64 470.7 26.3 312 35-395 40-365 (371)
9 TIGR02048 gshA_cyano glutamate 100.0 2E-58 4.4E-63 456.2 25.4 306 37-395 31-361 (376)
10 COG2170 Uncharacterized conser 100.0 6.5E-58 1.4E-62 432.1 17.3 332 15-395 15-363 (369)
11 TIGR02050 gshA_cyan_rel unchar 100.0 2.7E-55 5.9E-60 421.8 20.3 247 35-327 35-286 (287)
12 PF04107 GCS2: Glutamate-cyste 100.0 4.6E-50 9.9E-55 386.9 10.0 262 20-323 20-288 (288)
13 PRK02471 bifunctional glutamat 99.9 3.6E-27 7.8E-32 252.2 19.2 309 22-379 30-397 (752)
14 PRK02107 glutamate--cysteine l 98.8 5.9E-07 1.3E-11 92.3 22.5 121 35-163 53-203 (523)
15 TIGR01434 glu_cys_ligase gluta 98.8 1.2E-06 2.6E-11 89.9 22.8 121 35-163 49-199 (512)
16 PF03074 GCS: Glutamate-cystei 98.6 1.4E-07 3E-12 92.1 8.3 251 115-379 5-342 (371)
17 COG2918 GshA Gamma-glutamylcys 98.4 1.7E-05 3.6E-10 78.7 17.6 130 34-168 53-215 (518)
18 PF04262 Glu_cys_ligase: Gluta 98.4 1.4E-06 3.1E-11 86.0 9.0 120 35-165 51-204 (377)
19 TIGR01435 glu_cys_lig_rel glut 98.3 6E-05 1.3E-09 81.1 18.8 121 35-164 40-188 (737)
20 KOG3754 Gamma-glutamylcysteine 97.8 1.9E-05 4E-10 78.1 4.1 158 124-288 250-450 (640)
21 PLN02284 glutamine synthetase 95.2 0.16 3.5E-06 50.6 10.5 93 37-160 188-288 (354)
22 PF12224 Amidoligase_2: Putati 94.9 0.061 1.3E-06 50.7 6.3 40 122-161 110-153 (252)
23 PLN03036 glutamine synthetase; 94.7 0.21 4.5E-06 51.0 9.9 93 37-160 248-348 (432)
24 TIGR03105 gln_synth_III glutam 94.4 0.34 7.3E-06 49.7 10.6 45 38-83 177-222 (435)
25 TIGR00653 GlnA glutamine synth 92.9 0.95 2.1E-05 46.8 11.0 46 37-83 201-247 (460)
26 PRK09469 glnA glutamine synthe 92.4 1.4 3E-05 45.7 11.5 47 36-83 208-256 (469)
27 COG0174 GlnA Glutamine synthet 91.0 1.3 2.8E-05 45.4 9.3 45 37-82 184-229 (443)
28 PF00120 Gln-synt_C: Glutamine 90.3 1.2 2.7E-05 42.2 8.0 45 37-82 87-132 (259)
29 PF04107 GCS2: Glutamate-cyste 87.0 0.047 1E-06 52.8 -4.2 47 247-293 228-274 (288)
30 PF09899 DUF2126: Putative ami 70.0 1.3E+02 0.0029 33.0 14.4 53 36-92 323-376 (819)
31 PF14395 COOH-NH2_lig: Phage p 60.6 61 0.0013 30.7 8.7 55 36-91 37-95 (261)
32 TIGR00695 uxuA mannonate dehyd 47.5 1E+02 0.0023 31.2 8.6 54 55-111 204-262 (394)
33 PF01883 DUF59: Domain of unkn 45.6 42 0.00091 24.8 4.3 62 4-69 2-63 (72)
34 COG4871 Uncharacterized protei 40.5 1.3E+02 0.0029 26.4 7.0 89 8-106 46-134 (193)
35 PF09981 DUF2218: Uncharacteri 37.3 98 0.0021 24.3 5.4 64 6-69 10-77 (89)
36 COG1312 UxuA D-mannonate dehyd 29.5 2.5E+02 0.0054 27.9 7.7 84 55-145 182-267 (362)
37 KOG0683 Glutamine synthetase [ 28.0 70 0.0015 31.9 3.7 48 38-89 200-248 (380)
38 TIGR01527 arch_NMN_Atrans nico 25.0 1.6E+02 0.0035 25.9 5.3 48 65-112 14-61 (165)
39 PF12324 HTH_15: Helix-turn-he 24.2 82 0.0018 24.2 2.7 24 4-31 53-76 (77)
40 TIGR02945 SUF_assoc FeS assemb 23.3 2.2E+02 0.0048 22.3 5.3 59 5-67 5-64 (99)
41 cd02168 NMNAT_Nudix Nicotinami 21.6 2.2E+02 0.0047 25.5 5.5 46 66-111 15-60 (181)
42 PF06342 DUF1057: Alpha/beta h 20.4 3.6E+02 0.0077 26.2 6.9 48 67-114 51-101 (297)
43 COG4004 Uncharacterized protei 20.1 4.5E+02 0.0098 20.9 7.3 66 2-71 13-82 (96)
No 1
>PLN02611 glutamate--cysteine ligase
Probab=100.00 E-value=2.2e-94 Score=724.36 Aligned_cols=396 Identities=86% Similarity=1.445 Sum_probs=386.3
Q ss_pred CChHHHHHHHHHhHhccCCcccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCe
Q 016072 1 MKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIG 80 (396)
Q Consensus 1 ~~~~~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~ 80 (396)
++|++|++||+.|.++|||++++|+|++||+.++|.+||+|||||||+|++||+++.++++++.+.+.+++++++++|+.
T Consensus 87 v~y~~i~~lL~~l~~~~gw~~~~e~g~iIgl~~~g~~ITlEPGgQiElSt~p~~si~e~~~el~~~~~~l~~~a~~~Gl~ 166 (482)
T PLN02611 87 MKYDQIAQLLEGLAERFGWEKIMEGDNIIGLKQDGQSVSLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIG 166 (482)
T ss_pred CCHHHHHHHHHHHHHhcCCceeccCCceecccCCCCceEecccceEEecccCcCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCCCCCCcHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCC
Q 016072 81 FLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANS 160 (396)
Q Consensus 81 l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNS 160 (396)
+++.|+||++++.+++++||+||+.|.++|++.|..|++||+.|||+|||||+++++++++++|.+++|+|+++||||||
T Consensus 167 l~g~G~hP~~~~~~~~i~pk~RY~~M~~y~~~~g~~g~~MM~~t~g~QVhvd~~seed~v~~~~~~~~l~Pvl~ALfANS 246 (482)
T PLN02611 167 FLGIGFQPKWSVADIPIMPKGRYKIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEQDMVRKFRVGLALQPIATALFANS 246 (482)
T ss_pred eEccCCCCCCccccccCCCChHHHHHHHHHHHhhhhhhhhccceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCC
Q 016072 161 PFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLP 240 (396)
Q Consensus 161 P~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~ 240 (396)
|||+|++|||.|+|+.+|+++|++|||++|+.|+++++|++|+++++++||||+.++|.+++..+.+|.|||+++++.++
T Consensus 247 Pf~eG~~tG~~S~R~~iW~~~D~~rtg~~P~~F~d~~~fe~yv~~~Ld~Pm~fv~r~g~~~~~~g~tFrd~~~g~~~~~~ 326 (482)
T PLN02611 247 PFTEGKPNGYLSYRSHIWTDTDKDRTGMLPFVFDDDFGFERYVDYALDVPMYFVYRNGKYIDCTGMSFRDFMAGKLPQLP 326 (482)
T ss_pred ccccCcCCCCcchHHHHHHhcCCCCCCCCCCcCCChhHHHHHHHHHHCCCeEEEEeCCceecCCCCCHHHHHcCcCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877788
Q ss_pred CCCCChhhhhhhhcCCCCccccccceeeccCCCCchhhhchHHHHHHHhhcChhhhhhhhhcCCCccHHHHHHHhhhhhh
Q 016072 241 GELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPK 320 (396)
Q Consensus 241 g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar 320 (396)
|++|+++||++|+||+||+||+|||||||.+|++|++.++|++||++||+|+..+++.+++.+..|..++...+|.++.+
T Consensus 327 ~~~pt~~D~~~HLSt~FP~VRlK~~lE~R~aDa~P~~~~~a~~A~~~GLlyd~~al~~a~~l~~~w~~~~r~~lr~~~~~ 406 (482)
T PLN02611 327 GELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEESLQSALDMIADWTPEEREMLRNKVPK 406 (482)
T ss_pred CCCCCHHHHHHHHhcCCCCccccceEEeccccCCChhhhhhHHHHHHHHhcCHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred cCCCCccCCccHHHHHHHHHHHHHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHcCccccChHHHHhhhcC
Q 016072 321 TGLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEELLY 396 (396)
Q Consensus 321 ~Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~~~~~~vv~~~~~~~~~ 396 (396)
.||++.+.++++.++++++|++|++||.++|..|..||++|.+++++|+|||+++++.|++.|..-|+.++.|++|
T Consensus 407 ~Gl~~~~~~~~l~~~a~~~l~lA~~gL~~rg~~E~~~L~~l~~~v~~g~tpAd~~l~~~~~~~~~~~~~~~~~~~~ 482 (482)
T PLN02611 407 TGLKTPFRDGTLKDVAEEVLKLAKDGLERRGYNEEGFLNALAEIVRTGVTPAERLLELYEGKWGRSVDPVFEELLY 482 (482)
T ss_pred hhccCccCCccHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHcCCCHHHHHHHHhcchhcCCchHhhhhhcC
Confidence 9999999899999999999999999999999998899999999999999999999999999999999999999886
No 2
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type. This model represents one of two highly dissimilar forms of glutamate--cysteine ligase (gamma-glutamylcysteine synthetase), an enzyme of glutathione biosynthesis. The other type is modeled by TIGR01434. This type is found in plants (with a probable transit peptide), root nodule and other bacteria, but not E. coli and closely related species.
Probab=100.00 E-value=4.9e-89 Score=684.53 Aligned_cols=395 Identities=83% Similarity=1.395 Sum_probs=379.4
Q ss_pred ChH---HHHHHHHHhHhccCCcccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcC
Q 016072 2 KYE---QIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMG 78 (396)
Q Consensus 2 ~~~---~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g 78 (396)
+|+ +|++||+.|..+|||++++|+|++|||.++|.+||+|||||||+|++||.++.++++++.+.+..++++++++|
T Consensus 42 ~y~~~~gi~~~l~~l~~~~g~~~~~e~g~~i~l~~~~~~itlEPggQlElS~~p~~~i~e~~~~l~~~~~~l~~~a~~~G 121 (446)
T TIGR01436 42 KYEQKGGIAELLNGIAERFGWQKVMEGDKIIGLKQDKQSISLEPGGQFELSGAPLETIHETCDEINSHLYQVKEVAEEMG 121 (446)
T ss_pred CCCCchhHHHHHHHHHhhcCCceeccCCceeeecCCCCeEEEcCcCeEEecccccCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 576 59999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeccCCCCCCCCCCCCCCcHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhh
Q 016072 79 IGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFA 158 (396)
Q Consensus 79 ~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsa 158 (396)
+.+++.|+||++++.+++++||+||+.|.++|++.|..|++||+.|||+|||||+++++++++++|.+++|+|+++||||
T Consensus 122 l~l~~~G~~P~~~~~~~~~~pk~RY~~M~~~~~~~G~~g~~mm~~t~g~qVhld~~~e~d~v~~~~~~~~l~Pvl~ALfA 201 (446)
T TIGR01436 122 IGFLGLGFQPKWRREDIPLMPKGRYDIMRNYMPKVGKLGLDMMLRTCTVQVNLDFSSEADMVRKFRASLALQPLATALFA 201 (446)
T ss_pred CCeEecCCCCCCCcccCCCCCchHHHHHHHHHhhcchHHHHHhHhheeEEEeeCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999899999999999999999988889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCC
Q 016072 159 NSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPC 238 (396)
Q Consensus 159 NSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~ 238 (396)
|||||+|++|||.|+|+.+|++++|+|||.+|+.|+++++|++|+++++++||||+.++|.+++..+.+|.||++++++.
T Consensus 202 NSPf~~G~~tG~~S~R~~iW~~~Dp~rtG~~P~~f~~~~~fe~y~~~lld~Pm~~v~r~g~~~~~~g~~f~d~l~g~~~~ 281 (446)
T TIGR01436 202 NSPFLEGKPNGFLSYRSHIWTDTDPDRTGMLPFVFDDSFGFERYVDYALDVPMYFAYRKGKYIDCTGMTFRAFLAGKLPA 281 (446)
T ss_pred CCccccCCCCCccchHHHHHHhcCCCcCCCCCCCCCCcccHHHHHHHHhhCCeEEEecCCceecCCCCcHHHHhhCcCcc
Confidence 99999999999999999999999888999889999999999999999999999999999999999999999999998777
Q ss_pred CCCCCCChhhhhhhhcCCCCccccccceeeccCCCCchhhhchHHHHHHHhhcChhhhhhhhhcCCCccHHHHHHHhhhh
Q 016072 239 LPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKV 318 (396)
Q Consensus 239 ~~g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 318 (396)
++|++|+++||.+|+||+||+||+|+|||+|.+|++|++.++|++||++||+|+...++.+++.+..|..++...++..+
T Consensus 282 ~~g~~p~~~D~~~HlSt~FpeVRlk~~lE~R~aD~~p~~~~~a~~Al~~gLlyd~~al~~a~~l~~~w~~~~~~~l~~~~ 361 (446)
T TIGR01436 282 LPGELPTLNDWENHLSTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDLLQAALDLTKDWSPAEREMLRNEV 361 (446)
T ss_pred cCCCCCCchhHHHHhhccCCCceeCCeEEecccccCChhhhhHHHHHHHHHhcCHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999888999988899999999
Q ss_pred hhcCCCCccCCc-cHHHHHHHHHHHHHHhhhhcCC------chhchHHHHHHHHHcCCChHHHHHHHHcCccccChHHHH
Q 016072 319 PKTGLKTPFRDG-LLRHVAQDVLKLSKDGLERRGF------KETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVF 391 (396)
Q Consensus 319 ar~Gl~a~~~~~-~~~~~~~~Ll~~a~~~L~~~g~------~e~~~L~~l~~~l~~g~t~A~~q~~~~~~~~~~vv~~~~ 391 (396)
.|+|+++.+.++ .+.+++.+++++++.+|++++. .|..||++|.+++++|+|+|+++++.|++++++-++.++
T Consensus 362 ~~~gl~a~~~~~~~l~~~a~~~l~la~~gL~~r~~~~~~~~~e~~~L~~L~~i~~~g~t~A~~~l~~~~~~~~~~~~~~~ 441 (446)
T TIGR01436 362 PVTGLKTLFRDGQSLKHLGEDVLKLAKDGLERRGYKNAGGQDESRFLNPVGEVVETGQTPAERLLEMYNGEWGQSVDPVF 441 (446)
T ss_pred HHhccccCCCCcchHHHHHHHHHHHHHHHHHhccccccCCccchhHHHHHHHHHHcCCCHHHHHHHHhcccccccHHHHH
Confidence 999999988655 9999999999999999999754 455799999999999999999999999999999999999
Q ss_pred hhhcC
Q 016072 392 EELLY 396 (396)
Q Consensus 392 ~~~~~ 396 (396)
.|.+|
T Consensus 442 ~~~~~ 446 (446)
T TIGR01436 442 QELLY 446 (446)
T ss_pred HHhcC
Confidence 99886
No 3
>COG3572 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=100.00 E-value=5.4e-77 Score=565.30 Aligned_cols=392 Identities=61% Similarity=1.079 Sum_probs=373.9
Q ss_pred HHHHHHHHHhHhccCCcccccCCceeeecC--CCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 016072 4 EQIAELLNSIAERFDWEKVMEGDYIIGLKQ--GKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 81 (396)
Q Consensus 4 ~~v~~~l~~l~~~~~~~~~~~~g~li~~~~--~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l 81 (396)
.+|..+|+.|. +++|++++|.|++||+.. .++.|++|||+|+|+|.+|.+++.+.+.+.++++..+++++++.|+++
T Consensus 56 ~~i~a~L~g~~-r~gwepI~d~gn~I~L~~p~g~~aIslEpggq~Elsgapletihq~~~e~n~hlavlr~~a~~~gl~f 134 (456)
T COG3572 56 AGIFALLDGMQ-RLGWEPIMDVGNIIGLVEPIGQGAISLEPGGQFELSGAPLETIHQTCGEMNQHLAVLREIAAELGLGF 134 (456)
T ss_pred cchHHHhhhhh-hcCceeeccccceeeeccCCCCceEEeccCceEEecCCchHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 46889999985 799999999999999999 799999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCCCcHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCC
Q 016072 82 LGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSP 161 (396)
Q Consensus 82 ~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP 161 (396)
++.|.||.+...+.++.||+||+.|.+|+.++|..|-+||..||++|||+|+.++++..+++|..+++.|+..|||||||
T Consensus 135 vGlG~~Pkw~r~e~p~mpk~RY~iM~~Ympkvg~~glDMm~rtctiQVNLD~sse~dm~rk~rvs~~Lqp~ataLFANSp 214 (456)
T COG3572 135 VGLGGSPKWTRAEVPVMPKSRYAIMTRYMPKVGVKGLDMMTRTCTIQVNLDFSSETDMRRKMRVSLALQPLATALFANSP 214 (456)
T ss_pred EeecCCCccccCcCCCCCchHHHHHHHHHhhcCCcchhhhhhhheeEEeeccCcchhHHHHHHHHhhhhHHHHHHHccCC
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCC-CCC
Q 016072 162 FTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLP-CLP 240 (396)
Q Consensus 162 ~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~-~~~ 240 (396)
|-+|+.+||.|+|..||++.+|.|+|++|..|.+.++|.+|++|.+++||+|+.+.|.+.+....+|.+|+....+ .+.
T Consensus 215 Ftegkpng~lS~R~~iW~dtd~~r~G~l~~~f~d~fgf~dY~~~aldvpmyfv~r~~~y~d~~~~sfr~f~~gal~gel~ 294 (456)
T COG3572 215 FTEGKPNGLLSWRGDIWRDTDPQRSGVLPFAFSDDFGFIDYVNYALDVPMYFVRRTGHYHDCAHVSFRQFMAGALKGELP 294 (456)
T ss_pred ccCCCCccchhhhhhhhhccCccccccccccccCCCCHHHHHHHhhcCcEEEeccCCceeccceeeHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999998888888999999998655 478
Q ss_pred CCCCChhhhhhhhcCCCCccccccceeeccCCCCchhhhchHHHHHHHhhcChhhhhhhhhcCCCccHHHHHHHhhhhhh
Q 016072 241 GELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPK 320 (396)
Q Consensus 241 g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar 320 (396)
|.+|++.||..|+||.||+||+|++||+|.+|++|++..||++||+.||+|+...++.+.+..++|...+..-+|.+..+
T Consensus 295 ~~~pt~~D~~~HlstlFpdVrlk~~lEmRgad~gP~~r~cAlpAfwvGLLyd~~aLdAa~dl~~~~~~~e~~alR~~vp~ 374 (456)
T COG3572 295 GRRPTMKDWTNHLSTLFPDVRLKRFLEMRGADSGPWRRICALPAFWVGLLYDPEALDAAEDLTKDWTYEEVLALRNAVPK 374 (456)
T ss_pred cccCchhhhhhhhhhcCCCcchhceeEeecccCCCchhhhhhHHHHHHHhcCHHHHHHHHHhcccchHHHHHHHHHhcch
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred cCCCCccCCccHHHHHHHHHHHHHHhhhhc----C-Cchh-chHHHHHHHHHcCCChHHHHHHHHcCccccChHHHHhhh
Q 016072 321 TGLKTPFRDGLLRHVAQDVLKLSKDGLERR----G-FKET-GFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEEL 394 (396)
Q Consensus 321 ~Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~----g-~~e~-~~L~~l~~~l~~g~t~A~~q~~~~~~~~~~vv~~~~~~~ 394 (396)
.|+.+.+.+.++.++++++|.+++.||.++ + -.++ .||++|++++..|+|.|+.++..|+|.|..-|..++.+.
T Consensus 375 ~~l~~~~~~~t~~~iA~~~l~is~~GL~~R~~~N~d~~det~~L~~Ldev~a~g~t~Ae~~l~~y~g~w~~~~~~vf~~~ 454 (456)
T COG3572 375 KGLAAEFAGNTLLEIAKDVLPISRIGLKNRLVLNGDGGDETIFLDPLDEVLAGGTTIAEAMLSLYHGAWGGSIEPVFNEY 454 (456)
T ss_pred hhhhhhhhcChHHHHHHHHHHHHHHHHHHHHhhcCCccccchhcchHHHHHhcCCchHHHHHHHhccccCCccchhhHhh
Confidence 999999988999999999999999999998 1 1233 499999999999999999999999999988899999888
Q ss_pred cC
Q 016072 395 LY 396 (396)
Q Consensus 395 ~~ 396 (396)
+|
T Consensus 455 ~y 456 (456)
T COG3572 455 AY 456 (456)
T ss_pred cC
Confidence 87
No 4
>TIGR03444 gshA_related glutamate--cysteine ligase family protein. Members of this bacterial protein family bear homology to glutamate--cysteine ligase, an enzyme in the two-step pathway of glutathione (GSH) biosynthesis, but are distinctly different. Among the bacterial genomes that carry the uncharacterized methyltransferase (TIGR03438) and conserved hypothetical protein TIGR03440, this protein is found in a subset, always in the vicinity of these other genes. Conserved hypothetical protein TIGR03442 is found in these same genomes. The role of this cassette is probably biosynthetic, but the product is unknown.
Probab=100.00 E-value=3.4e-73 Score=554.37 Aligned_cols=326 Identities=33% Similarity=0.513 Sum_probs=295.4
Q ss_pred cCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcc
Q 016072 32 KQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMP 111 (396)
Q Consensus 32 ~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~ 111 (396)
.+.|.+||+|||||||+|++||.++.++++++.+.+..++++++++|+.++++|+||++. +++++||+||+.|.++|+
T Consensus 58 lp~g~~iTlEPGgQvELSt~P~~sl~el~~el~~~l~~l~~~a~~~Gl~lva~G~~P~~~--~~~itpk~RY~~M~~~~~ 135 (390)
T TIGR03444 58 LPGGSRITVEPGGQLELSGPPADGLTAAVAALAADLAVLRAALAEDGLALVGLGADPLRP--PRRVLPGPRYRAMEQFFA 135 (390)
T ss_pred CCCCCeEEeCCCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeccCCCCC--ccCCCchHHHHHHHHHhh
Confidence 366789999999999999999999999999999999999999999999999999999965 678999999999999997
Q ss_pred -ccccchhhhhcccceeEeeeCCC-ChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCC
Q 016072 112 -KVGSLGLDMMFRTCTVQVNLDFS-SEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGML 189 (396)
Q Consensus 112 -~~g~~g~~~~~~~~s~qVhv~~~-~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~ 189 (396)
+.|..|++||.+|||+||||++. +++++.+++|.++.++|+++|||||||||+|++|||+|+|+.+|+++|++|||
T Consensus 136 ~~~G~~G~~MM~~tasVQV~ld~~~~e~D~~~k~rva~aL~PvLlALfANSPf~~Gr~tG~~S~R~~iW~~~d~~Rtg-- 213 (390)
T TIGR03444 136 TGIGPFGALMMCSTASVQVNLDAGTDPAEWAERWRLAHALGPVLIAAFANSPALGGRPTGWRSTRQRVWGQLDAARTG-- 213 (390)
T ss_pred hccCchHHHHhhCceeEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCchhhHHHHHhhCCCCCCC--
Confidence 67889999999999999999999 48999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCc-hhHHHHHHHHhcCcceeee--ecCccccCC-CCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccccc
Q 016072 190 PFVFDDS-FGFEQYVDYALDVPMYFVY--RKKKYIDCA-GMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRY 265 (396)
Q Consensus 190 p~~f~~~-~~~~~y~~~l~~~p~~~~~--~~g~~i~~~-~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g~ 265 (396)
|..|... +.|++|++|++++||||+. ++|.+++.. +.+|.||+.+ .....|++|+.+||++|+||+||+||+|||
T Consensus 214 p~~~~~~~~~~~~ya~y~Ld~P~~~v~~~~~g~~~~~~~g~tF~d~~~g-~~~~~~~~pt~~D~~~HLsTlFP~VR~k~~ 292 (390)
T TIGR03444 214 PVLAASGDDPADDWARYALDAPLMCVRNPDDGEPVPVTDGVTFADWVAG-RDPVIGRRPTRADLDYHLTTLFPPVRPRGW 292 (390)
T ss_pred CCCCCCCCCcHHHHHHHHhCCCeEEEEECCCCceeeCCCCcCHHHHHcc-CcccCCCCCCHHHHHHHHhccCCCccccce
Confidence 5567665 6799999999999999999 788878777 6899999998 445778999999999999999999999999
Q ss_pred eeeccCCCCchhhhchHHHHHHHhhcChhhhhhhhhcCCCccHHHHHHHhhhhhhcCCCCccCCccHHHHHHHHHHHHHH
Q 016072 266 LEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKD 345 (396)
Q Consensus 266 IEiR~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~~~~~~~~~~Ll~~a~~ 345 (396)
||||.+|++|++..++++||++||+||..+++.+++.+..| ++. | ..|+|.||.++ ++.+++.++|++|++
T Consensus 293 lEiR~~Da~p~~~~~a~~A~~~gLlyD~~al~~a~~~~~~~--~~~-~--~~a~r~gl~~~----~l~~~A~~~~~~a~~ 363 (390)
T TIGR03444 293 LELRYLDAQPGDGWPVPVATLTALLDDPVAAAEAAEAAAPV--ATR-W--DDAARLGLADR----ELRAAAVRCLDLAAA 363 (390)
T ss_pred eEeecccCCChhhcchHHHHHHHHhcCHHHHHHHHHHHHHH--HHH-H--HHHHHhccCCh----HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998888 333 3 48999999855 899999999999999
Q ss_pred hhhhcCCchhchHHHHHHHHHcCCChHH
Q 016072 346 GLERRGFKETGFLNEVAEVVRTGVTPAE 373 (396)
Q Consensus 346 ~L~~~g~~e~~~L~~l~~~l~~g~t~A~ 373 (396)
++.. ++.+ ..-+.+.+.+++|++|||
T Consensus 364 ~~~~-~~~~-~~~~~~~~~~~~gr~p~d 389 (390)
T TIGR03444 364 RAPT-ELAE-AVLDLAARYVDRGRCPAD 389 (390)
T ss_pred hCCh-hhHH-HHHHHHHHHHhcCCCCCC
Confidence 8873 2222 233455567999999986
No 5
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional
Probab=100.00 E-value=1.9e-64 Score=499.53 Aligned_cols=312 Identities=19% Similarity=0.182 Sum_probs=280.0
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|.+ +|||++|+||.++.+++++|...++.++++|+++|++|++.|+||+..+.+++++|++||+.|.+.|+
T Consensus 47 ~~~v~~El~~~qIEi~T~p~~~~~el~~eL~~~r~~l~~~A~~~G~~lva~GthP~~~~~~~~it~~~RY~~l~~~~~-- 124 (373)
T PRK13516 47 AGEIKPEITESMIEIATGVCRDIDQALGQLSAMRDVLVQAADKLNIGICGGGTHPFQQWQRQRICDNPRFQYLSELYG-- 124 (373)
T ss_pred ccccChhhhCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeecCCCCCCccccCCCCcHHHHHHHHHhh--
Confidence 458999975 99999999999999999999999999999999999999999999999998889999999999999984
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
..+++++ +||+||||++++.++++.++|.+..|+|+|+|||||||||+|++|||+|+|..+|++|| ++|. |+.|
T Consensus 125 -~~~~~~~--i~G~HVHvg~~d~~~av~~~~~l~~~lP~llALsAsSPf~~G~dTG~~S~R~~~~~~~P--~~G~-pp~~ 198 (373)
T PRK13516 125 -YLAKQFT--VFGQHVHIGCPSGDDALYLLHGLSRYVPHFIALSASSPYVQGVDTGFASARLNSVSAFP--LSGR-APFV 198 (373)
T ss_pred -hhhhhhe--eeeeEEEeCCCCHHHHHHHHHHHHhHhHHHHHHHhCCccccCcCCcchhHHHHHHhcCC--CCCC-CCCc
Confidence 5577777 99999999999999999999999999999999999999999999999999999999999 8886 5689
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccccceeeccCCC
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADG 273 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~ 273 (396)
.||.+|++|++.++++ |. |.+.++.|||+ ||+ .+++| ||||+||+
T Consensus 199 ~~~~~y~~~~~~l~~~--------G~-i~d~~~~~Wdv-----------Rp~-----~~~~T----------vEiRv~D~ 243 (373)
T PRK13516 199 LNWQEFEAYFRKMSYT--------GV-IDSMKDFYWDI-----------RPK-----PEFGT----------VEVRVMDT 243 (373)
T ss_pred CCHHHHHHHHHHHHHc--------CC-cCCCCeeEEEe-----------ccC-----CCCCC----------eEEecCCC
Confidence 9999999999999997 74 77778888887 666 44444 99999999
Q ss_pred Cc-hhhhchHHHHHHHhhcChhhhhhhhhc-CCC-ccHHHHHHHhhhhhhcCCCCccCC------ccHHHHHHHHHHHHH
Q 016072 274 GP-WRRLCALPAFWVGLLYDEDSLQNVLDM-TAD-WTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLSK 344 (396)
Q Consensus 274 ~p-~~~~~a~aAl~~gL~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~~~~~Ll~~a~ 344 (396)
|+ +++++++|||+++|+...... ..... .+. +..++|+| +|+|+|++|.+.+ .|+++++++|++.++
T Consensus 244 ~~~~~~~~~iaal~~alv~~~~~~-~~~~~~~~~~~~~~~n~w---rAaR~Gl~g~~id~~~~~~~p~~~~l~~ll~~~~ 319 (373)
T PRK13516 244 PLTLERAAAIAAYIQALARWLLTE-RPFKPQEDDYLVYTFNRF---QACRFGLEGVLVDPATGERRPLAEDILRTLDRIA 319 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhc-CCCCCCcChHHHHHHHHH---HHHHhCCCceEEcCCCCcEEEHHHHHHHHHHHHH
Confidence 99 899999999999998665433 22223 455 67889999 9999999996642 399999999999999
Q ss_pred HhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc--CccccChHHHHhhhc
Q 016072 345 DGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH--GKWRESVDPVFEELL 395 (396)
Q Consensus 345 ~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~--~~~~~vv~~~~~~~~ 395 (396)
+.++++||.+ ++..+.+++++|.|+|+|||++|+ |++++||+.++++|+
T Consensus 320 p~~~~~g~~~--~~~~~~~~~~~g~~~a~rqr~~~~~~~~l~~Vv~~~~~~~~ 370 (373)
T PRK13516 320 PHAEALGASS--ALEALRRQVKSGLNDAQWLREFYADGGSLIELVRQQCERWA 370 (373)
T ss_pred HHHHHcCCHH--HHHHHHHHHHhCCCHHHHHHHHHHhCCCHHHHHHHHHHHhc
Confidence 9999999876 588999999999889999999994 689999999999986
No 6
>PRK13518 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=1.7e-62 Score=480.06 Aligned_cols=297 Identities=16% Similarity=0.160 Sum_probs=261.5
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|+. +|||++|+||.++.++.++|...++.+.++|+++|+.+++.||||+++|.+++++||+||+.|.+.++
T Consensus 48 ~~~~~~El~~~qvEi~T~~~~~~~el~~~L~~~r~~l~~aa~~~g~~l~a~GthP~~~~~~~~~t~~~RY~~m~~~~~-- 125 (357)
T PRK13518 48 AGRLDHELFKFVIETQTPLIEDPSEAGAALREVRDALVDHAAAHGYRIAAAGLHPAAKWRELEHAEKPRYRSQLDRIQ-- 125 (357)
T ss_pred CCcccccccCceEEEcCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCccccCCCCCcHHHHHHHhcc--
Confidence 557999997 99999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
..++++. +||+||||++++.++++.++|.++.++|+|+|||||||||+|++|||+|+|+.+|++|| ++|. |++|
T Consensus 126 -~~~~~~~--~~G~HVHVg~~d~d~av~v~n~lr~~LP~LlALsAnSPf~~G~dTG~aS~R~~iw~~~P--~aG~-p~~f 199 (357)
T PRK13518 126 -YPQHRNT--TAGLHVHVGVDDADKAVWIANELRWHLPILLALSANSPYWNGFDTGLASARAKIFEGLP--NTGM-PTAF 199 (357)
T ss_pred -cchhcce--eeEEEEEeCCCCHHHHHHHHHHHHhHHHHHHHHHcCCccccCcCCCcccHHHHHHHhCC--CCCC-Cccc
Confidence 4455555 99999999999999999999999999999999999999999999999999999999999 6775 8899
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccccceeeccCCC
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADG 273 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~ 273 (396)
++|++|++|++.++++ |. |.+.++.|||+ ||+ +|++| ||||+||+
T Consensus 200 ~~~~~ye~~v~~l~~~--------G~-i~d~~~i~wdv-----------Rps-----~~~pT----------vEiRv~D~ 244 (357)
T PRK13518 200 EDFEAFQRFERRMVET--------GS-IEDRGELWYDV-----------RPH-----TGHGT----------VEVRTPDA 244 (357)
T ss_pred CCHHHHHHHHHHHHhc--------CC-cCCCCceEEcc-----------CCC-----CCCCc----------eeEecCCC
Confidence 9999999999999997 74 66778889998 776 45444 99999999
Q ss_pred Cc-hhhhchHHHHHHHhhcChhhh---hhhhhcCCCccHHHHHHHhhhhhhcCCCCccCC------ccHHHHHHHHHHHH
Q 016072 274 GP-WRRLCALPAFWVGLLYDEDSL---QNVLDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVLKLS 343 (396)
Q Consensus 274 ~p-~~~~~a~aAl~~gL~~~~~~~---~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~~~~~Ll~~a 343 (396)
|| +++++++|||+++|+...... +.....++.+...+|+| +|+|+|++|.+.+ .|+++++++|++.+
T Consensus 245 ~~~~~~~~~lAal~raLv~~~~~~~~~g~~~~~~~~~~~~~n~W---rAaR~Gl~g~lid~~~~~~~p~~~~l~~ll~~~ 321 (357)
T PRK13518 245 QADPDVVLAFVEYVHALVTDLAERYEDGESGTTLRRELLDENKW---RAMRHGHDASFIDRDGEGTVDLGELVDRECDRL 321 (357)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhccccCCCCccCCHHHHHHHHH---HHHhhCCCceEEeCCCCeEeEHHHHHHHHHHHH
Confidence 99 899999999999998654332 22344556777899999 8999999996642 38999999999886
Q ss_pred HHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc-CccccChHHHH
Q 016072 344 KDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH-GKWRESVDPVF 391 (396)
Q Consensus 344 ~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~-~~~~~vv~~~~ 391 (396)
.+..+.+++++| |+|+|||++|+ +++++||+.+.
T Consensus 322 -------------~~~~~~~~~~~g-~~A~rQr~~~~~~~l~~Vv~~~~ 356 (357)
T PRK13518 322 -------------GVDGIRDLYDAE-SGAQRQRRLLEEEGVDALCESLL 356 (357)
T ss_pred -------------HHHHHHHHHHcC-CHHHHHHHHHHhCCHHHHHHHhc
Confidence 256778888766 89999999995 77999998764
No 7
>PRK13517 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=3.6e-62 Score=486.21 Aligned_cols=309 Identities=24% Similarity=0.289 Sum_probs=275.1
Q ss_pred Ccceeecc-CceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep-~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|+ ++|||++|+||+++.++.++|...++.++++++++|+.|++.|+||+.++.+++++|++||+.|.++++
T Consensus 46 ~~~i~~El~~~qiEi~t~p~~~~~el~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~~-- 123 (373)
T PRK13517 46 GPHLQKELLRNTVEVVTGVCDTVAEARADLRRTRALARRAAERRGARLAAAGTHPFSDWSEQPVTDKPRYAELIERTQ-- 123 (373)
T ss_pred CCcccccccCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeeCCCCCCCCccCCCCCchHHHHHHHHHH--
Confidence 67899998 699999999999999999999999999999999999999999999999998889999999999999874
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
..+++|| +||+||||++++.+++++++|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++| +|+.|
T Consensus 124 -~~~~~~~--~~g~hVhv~v~~~~~~i~~~n~l~~~lP~llALsAnSPf~~G~dtg~~S~R~~~~~~~p--~~G-~p~~f 197 (373)
T PRK13517 124 -WWARQQL--ICGVHVHVGVPSREKVVPVINRLRPWLPHLLALSANSPFWRGEDTGYASNRAMLFQQLP--TAG-PPPQF 197 (373)
T ss_pred -HHHHhhe--eeeeEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCchhcCCCCcchhHHHHHHHhCC--CCC-CCccC
Confidence 5689999 99999999999999999999999999999999999999999999999999999999998 455 68899
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccc---cceeecc
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRG 270 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~---g~IEiR~ 270 (396)
+||++|++|++.++++ |. +. |.+++||+|||+ ++||||+
T Consensus 198 ~s~~~y~~~v~~l~~~--------g~-i~-----------------------------~~~~iwwdvRp~~~~~tiEiRv 239 (373)
T PRK13517 198 GSWAEYEAYVADLLKT--------GV-IL-----------------------------DEGMVYWDIRPSPKLGTVEVRV 239 (373)
T ss_pred CCHHHHHHHHHHHHHc--------CC-cC-----------------------------CCCceEEecccCCCCCceeEec
Confidence 9999999999999975 63 43 334556666665 4599999
Q ss_pred CCCCc-hhhhchHHHHHHHhhcChhhh---hhhhhcCCCccHHHHHHHhhhhhhcCCCCccCC------ccHHHHHHHHH
Q 016072 271 ADGGP-WRRLCALPAFWVGLLYDEDSL---QNVLDMTADWTTGERQMLRNKVPKTGLKTPFRD------GLLRHVAQDVL 340 (396)
Q Consensus 271 ~D~~p-~~~~~a~aAl~~gL~~~~~~~---~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~~~~~Ll 340 (396)
||+|| ++++++++||++||++..... +.....++.+...+|+| +|+|+|++|.+.+ .|+++++++||
T Consensus 240 ~D~~~~~~~~~~~aal~~~Lv~~~~~~~~~~~~~~~~~~~~~~~n~w---rAar~Gl~a~~~~~~~~~~~p~~~~~~~ll 316 (373)
T PRK13517 240 ADVCLTLRELVALAALVRCLVVTADRRLDAGEPLPTLPPWHVQENKW---RAARYGLDAEIIDDADGRERPVTDDLRDLL 316 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHH---HHHhcCCCceeecCCCCcEeEHHHHHHHHH
Confidence 99999 899999999999999865432 23344566777888999 8999999996642 39999999999
Q ss_pred HHHHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc--CccccChHHHHhhhc
Q 016072 341 KLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH--GKWRESVDPVFEELL 395 (396)
Q Consensus 341 ~~a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~--~~~~~vv~~~~~~~~ 395 (396)
+.++++|+++|+.+. ++.+.+++++| |+|+|||+.|+ |++++||+.++++|+
T Consensus 317 ~~~~~~l~~~g~~~~--~~~~~~i~~~g-~~A~rqr~~~~~~~~l~~vv~~~~~~~~ 370 (373)
T PRK13517 317 ERLEPVARELGCAEE--LAGVAEILRRG-AGYQRQRRVAERHGDLRAVVDALVAETR 370 (373)
T ss_pred HHHHHHHHHcCCHHH--HHHHHHHHHcC-CHHHHHHHHHHhcCCHHHHHHHHHHHhh
Confidence 999999999999764 68899999977 89999999994 799999999999985
No 8
>PRK13515 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=5.1e-60 Score=470.71 Aligned_cols=312 Identities=23% Similarity=0.330 Sum_probs=276.1
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|+. +|||++|+||+++.++.++|.+.++.+.++++++|+.+++.|+||+..|.+++++|++||+.|.+.++
T Consensus 40 ~~~i~~El~~~qiEi~T~p~~~~~el~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~t~~~RY~~m~~~~~-- 117 (371)
T PRK13515 40 GEQVKPEMHQSQVEVGTPVCATIAEAREELGRLRQRVAQLAAQFGLRIIAAGTHPFADWRRQEITPKERYAQLVEDLQ-- 117 (371)
T ss_pred CCccCcchhccEEEECCcccCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCCchHHHHHHHHHH--
Confidence 468999995 99999999999999999999999999999999999999999999999998889999999999998874
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
.+++.|| +||+||||++++++++++++|.++.++|+++|||||||||+|++|||+|+|..+|+.+| |+| +|+.|
T Consensus 118 -~~~~~~~--~~g~HVhv~~~d~e~~~~~~n~~~~~lP~llALsanSPf~~G~dtg~~S~R~~~~~~~p--~~g-~p~~~ 191 (371)
T PRK13515 118 -DVARRNL--ICGLHVHVGIPDREDRIDLMNQVRYFLPHLLALSTSSPFWGGRDTGLKSYRSAVFDEFP--RTG-LPPAF 191 (371)
T ss_pred -HHHHhhc--eeeeEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCchhhhHHHHHhhCC--CCC-CCCCC
Confidence 4578888 99999999999999999999999999999999999999999999999999999999998 888 47789
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccccceeeccCCC
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADG 273 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~ 273 (396)
.++++|++|++.++++ |. |...+..||++ ||+ ++ || +||||+||+
T Consensus 192 ~~~~~y~~~~~~l~~~--------g~-i~~~~~~~~~v-----------Rp~-----~~----~~------tiEiRv~D~ 236 (371)
T PRK13515 192 PSWAEYQRYVALLVKT--------GC-IDDAKKIWWDL-----------RPS-----PR----FP------TLELRICDV 236 (371)
T ss_pred CCHHHHHHHHHHHHhc--------CC-cCCCCeEEEEe-----------ccC-----CC----CC------CeeEecCCC
Confidence 9999999999999987 64 55566677776 555 23 33 399999999
Q ss_pred Cc-hhhhchHHHHHHHhhcChhhh---hhhhhcCCCccHHHHHHHhhhhhhcCCCCccC---C---ccHHHHHHHHHHHH
Q 016072 274 GP-WRRLCALPAFWVGLLYDEDSL---QNVLDMTADWTTGERQMLRNKVPKTGLKTPFR---D---GLLRHVAQDVLKLS 343 (396)
Q Consensus 274 ~p-~~~~~a~aAl~~gL~~~~~~~---~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~---~---~~~~~~~~~Ll~~a 343 (396)
|| .++++++|||++||+...... +...+..+.+...+|+| +|+|+|++|.+. + .|+++++++||+.+
T Consensus 237 ~p~~~~~~a~aal~~~lv~~l~~~~~~~~~~~~~~~~~~~~n~w---~Aar~Glda~~~~~~~~~~~~~~~~~~~ll~~~ 313 (371)
T PRK13515 237 CTRLDDALALAALFQALVRKLYRLRRQNLTFRVYRRALIEENKW---RAQRYGLDGKLIDFGKQEEVPARELLEELLEFV 313 (371)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHhcCCCCCcccHHHHHHHHH---HHHhhCCCceeecCCCCcEEEHHHHHHHHHHHH
Confidence 99 799999999999998554322 23344556677888999 899999999664 1 28999999999999
Q ss_pred HHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc---CccccChHHHHhhhc
Q 016072 344 KDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH---GKWRESVDPVFEELL 395 (396)
Q Consensus 344 ~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~---~~~~~vv~~~~~~~~ 395 (396)
+++|+++|+.+ .++.+.+++++| |+|+|||+.|+ +++++||+.++++++
T Consensus 314 ~~~l~~~g~~~--~~~~~~~i~~~g-~~A~rqr~~~~~~~~~l~~vv~~~~~~~~ 365 (371)
T PRK13515 314 DDVADALGSRR--EVEYARTILEEG-TSADRQLRVYAETGGALRAVVDWLIEETL 365 (371)
T ss_pred HHHHHHcCCHH--HHHHHHHHHHcC-CHHHHHHHHHHhccCCHHHHHHHHHHHHh
Confidence 99999999876 588999999988 89999999994 689999999999875
No 9
>TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative. This family consists of proteins believed (see Copley SD, Dhillon JK, 2002) to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione.
Probab=100.00 E-value=2e-58 Score=456.16 Aligned_cols=306 Identities=18% Similarity=0.213 Sum_probs=267.9
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEeccCCCCCCC-CCCCCCCcHHHHHHHHhcccc
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGI-GFLGIGFQPKWGL-KDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~-~l~~~G~~P~~~~-~~~~~~p~~RY~~m~~~~~~~ 113 (396)
.+..|.. +|||++|+||.++.++.++|...++.++++++.+|+ .|++.|+||+..| ..++++|++||+.|.+.
T Consensus 31 ~~~~El~~~~IE~~T~~~~~~~el~~~L~~~r~~l~~~a~~~g~~~l~a~gthP~~~~~~~~~~t~~~rY~~~~~~---- 106 (376)
T TIGR02048 31 GFVREPDSRNVEYTTPPLNSYDRLLCGLLRPRRQLRHYLSQLGDYTLIPGSTLSLGGTDRFYRSDPQNPYHTYIEQ---- 106 (376)
T ss_pred CCccchhhcEEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCCeeeecccCCCCCCCccCcCCCcchHHHHHHH----
Confidence 4666885 999999999999999999999999999999999999 8999999999999 67789999999999765
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
.++++++ +||+||||+++|+|+++.++|.++.|+|+|+|||||||||+|+||||+|+|..+|++|| + +|+.|
T Consensus 107 -~~~~~~~--i~G~HVHVgv~d~d~av~v~n~lr~~LP~LlALSAsSPf~~G~dTG~aS~R~~~~~~~P---~--~pP~f 178 (376)
T TIGR02048 107 -TYGTQVV--TASVHINIGIPDPEELMRACRLVRMEAPLFLALSASSPFLDGQVTGYHSTRWQMFPKTP---Q--EVPLF 178 (376)
T ss_pred -Hhhhhhe--eeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcchhhHHHHHHHhCC---C--CCCCc
Confidence 2366776 99999999999999999999999999999999999999999999999999999999998 3 56699
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhh-----hcCCCCccccccceee
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENH-----LTTIFPEVRLKRYLEM 268 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~-----lst~~p~vR~~g~IEi 268 (396)
.+|.+|++|++.++++ | .|.+.++.|||+ ||+ .+ ++| |||
T Consensus 179 ~~~~~y~~~~~~li~~--------G-~i~d~~~~wwdv-----------RPs-----~~~~~~~~~T----------lEi 223 (376)
T TIGR02048 179 TSHAHFIEWTEEQLTL--------G-TMQNVRHLWSAV-----------RPN-----GDRRPYDLNR----------LEL 223 (376)
T ss_pred CCHHHHHHHHHHHHHc--------C-CccccCeeEEec-----------CCC-----CCCCcCCCCC----------EEE
Confidence 9999999999999987 7 477788899998 766 33 444 999
Q ss_pred ccCCCCc-hhhhchHHHHHHHhhcChhhh---h-hhhhcCCC----ccHHHHHHHhhhhhhcCCCCccC------CccHH
Q 016072 269 RGADGGP-WRRLCALPAFWVGLLYDEDSL---Q-NVLDMTAD----WTTGERQMLRNKVPKTGLKTPFR------DGLLR 333 (396)
Q Consensus 269 R~~D~~p-~~~~~a~aAl~~gL~~~~~~~---~-~~~~~~~~----~~~~~~~~~~~~aar~Gl~a~~~------~~~~~ 333 (396)
|+||+|+ +++++++|||+++|+...... + .....++. +...+|+| +|+|+|+++.+. ..|+.
T Consensus 224 RV~D~~~~~~~~~aiaalv~aLv~~~~~~~~~~~~~~~~~~~~~l~~ll~~n~w---rAaR~Gl~g~lid~~~~~~~pa~ 300 (376)
T TIGR02048 224 RICDLVTDPISLLAITALLEARLLQLLADPDLDPLQQSQLTPEELLALADQNEI---SAAVSSLDATLTHWRDGRAIAAR 300 (376)
T ss_pred EeccCcCCHHHHHHHHHHHHHHHHHHHhccccCCcccCCCChhHHHHHHHHHHH---HHHhhCCCceEEecCCCCEeEHH
Confidence 9999999 899999999999987433221 1 12233344 66778999 899999999653 23899
Q ss_pred HHHHHHHHHHHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc--CccccChHHHHhhhc
Q 016072 334 HVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH--GKWRESVDPVFEELL 395 (396)
Q Consensus 334 ~~~~~Ll~~a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~--~~~~~vv~~~~~~~~ 395 (396)
+++.+|++.+++.++.+|+.+ ++..+.+++++| |+|+||++.|+ |++++||+.++++|.
T Consensus 301 ~~l~~Lle~v~p~~~~~g~~~--~l~~l~~il~~G-~~A~Rqr~~~~~~g~l~~Vv~~l~~~t~ 361 (376)
T TIGR02048 301 EWIEELYQEVWLIAKYQGFSC--FLPPLRKILREG-NQAQQWLTQYEQGKTPQTIVQQAILQTE 361 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhC-CHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999999999999876 588999999999 89999999994 689999999999885
No 10
>COG2170 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=6.5e-58 Score=432.10 Aligned_cols=332 Identities=24% Similarity=0.287 Sum_probs=290.0
Q ss_pred hccCCcccccCCceeeecCC---CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCC
Q 016072 15 ERFDWEKVMEGDYIIGLKQG---KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKW 90 (396)
Q Consensus 15 ~~~~~~~~~~~g~li~~~~~---~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~ 90 (396)
+..|++..-....+|...++ ...|..|.- +++|+.|+.|.++.++.+.+.+.+..+.+++.++|+++++.|+|||.
T Consensus 15 d~~g~dl~~~s~~ii~~~~~~~~~~~~~~e~~e~~vE~~t~vc~~~~eA~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfa 94 (369)
T COG2170 15 DPQGYDLVGSSDAIIEALKGKVTAGHLKHEITESTVELATGVCRLLAEAAAQLRALRDYLVQAASDHGLRICGGGTHPFA 94 (369)
T ss_pred CCCCcccccccHHHHHhcCCCCCCcchhHHHHHHhhcccchhhhhHHHHHHHHHHHHHHHHHHhhhcCceecccCCCchh
Confidence 34455555555555555554 466778885 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCC
Q 016072 91 GLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGY 170 (396)
Q Consensus 91 ~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~ 170 (396)
+|..+++.+++||+.+.+.+ |++|++|. +||+||||++++.++++.++|.++.+.|+++|||||||||+|+||||
T Consensus 95 dw~~~~~~~~prY~~~ie~~---~y~~~q~~--v~G~HVHVGi~~~d~~~~~l~~l~~~~PhlLALSASSPf~~G~dTGy 169 (369)
T COG2170 95 DWRRQEVPDNPRYQRLIERT---GYLGRQMT--VAGQHVHVGIPSPDDAMYLLHRLLRYVPHLLALSASSPFWQGTDTGY 169 (369)
T ss_pred hhhhccCCCChhHHHHHHHh---hhHHhhee--eeeEEEEecCCCHHHHHHHHHHHHhhhhHHHhhhcCCccccCccchh
Confidence 99999999999999999987 56799999 99999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhh
Q 016072 171 LSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWE 250 (396)
Q Consensus 171 ~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~ 250 (396)
+|+|..+|.++| +.| +|+.|.||..|+.|++.+..+ | .|+..+..|||+ ||+
T Consensus 170 AS~R~~if~~~P--~~g-~pp~f~sw~~f~~~~~~~~~t--------G-~I~~~~~lwwdI-----------RPs----- 221 (369)
T COG2170 170 ASARANIFSQLP--TNG-LPPAFQSWAAFEAFFRDQLET--------G-TIDSMGDLWWDI-----------RPS----- 221 (369)
T ss_pred hhhhHhhhhhCC--cCC-CCccccCHHHHHHHHHHHHHh--------c-ccccccceEEec-----------ccC-----
Confidence 999999999998 566 577999999999999999987 7 488889999999 888
Q ss_pred hhhcCCCCccccccceeeccCCCCc-hhhhchHHHHHHHhhcChhh---hhhhhhcCCCccHHHHHHHhhhhhhcCCCCc
Q 016072 251 NHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPAFWVGLLYDEDS---LQNVLDMTADWTTGERQMLRNKVPKTGLKTP 326 (396)
Q Consensus 251 ~~lst~~p~vR~~g~IEiR~~D~~p-~~~~~a~aAl~~gL~~~~~~---~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~ 326 (396)
+|++| ||+|+||+++ +.++.|++||+++|+..... .+...+....|..++|+| +|+|+|++|.
T Consensus 222 ph~gT----------lEvRi~D~~~~l~~~~aivaL~~Alv~~ll~~~d~~p~~p~~l~~~~~eN~w---qA~RyGlda~ 288 (369)
T COG2170 222 PHLGT----------LEVRICDTVLNLAELLAIVALIHALVVWLLRRRDADPTEPDYLLYLFDENKW---QAARYGLDAV 288 (369)
T ss_pred CCCCc----------eEEEecCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHhhhHH---HHHHcccceE
Confidence 78877 9999999999 89999999999999865443 222223334566788999 9999999996
Q ss_pred cC------CccHHHHHHHHHHHHHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc---CccccChHHHHhhhc
Q 016072 327 FR------DGLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH---GKWRESVDPVFEELL 395 (396)
Q Consensus 327 ~~------~~~~~~~~~~Ll~~a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~---~~~~~vv~~~~~~~~ 395 (396)
+. ...+.+++.++++...+..+.+|+.. +|+.+.+++++| +++++|++.+. +++...|+..+++++
T Consensus 289 ~~~~~dg~~~~~~d~~~~~~~~l~p~A~~lg~~~--~l~~l~~il~~g-~~aqq~~R~~~~~~~~~~~~v~~~~~~l~ 363 (369)
T COG2170 289 ITDPADGRRRALTDWLLRLLQRLAPSAKKLGCAC--ALEALRDILREG-SSAQQQLRVFKQHGGSLIAAVDRHCEELA 363 (369)
T ss_pred EeeccCCceehHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHhc-cHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 53 23789999999999999999999975 599999999988 68999999884 678899998888865
No 11
>TIGR02050 gshA_cyan_rel uncharacterized enzyme. This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria. Species containing this protein, however, are generally not believe to make glutathione, and the function is unknown.
Probab=100.00 E-value=2.7e-55 Score=421.79 Aligned_cols=247 Identities=24% Similarity=0.282 Sum_probs=218.5
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|+. +|||++|+||.++.++.++|.+.++.++++++++|+++++.|+||+.++.+++++|++||+.|.+++
T Consensus 35 ~~~~~~El~~~qiEi~t~p~~~~~~l~~~l~~~~~~l~~~a~~~g~~l~~~G~hP~~~~~~~~~~~~~RY~~m~~~~--- 111 (287)
T TIGR02050 35 GAGFKHELFESQVELATPVCTTLAEAAAQIRAVRARLVQAASDHGLRICGAGTHPFARWRRQEVADNPRYQRLLERY--- 111 (287)
T ss_pred ccccChhhhccEEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCcHHHHHHHHHHH---
Confidence 345999995 9999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
|..+++|| +||+||||++++++++++++|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++| +|+.|
T Consensus 112 g~~~~~~~--~~g~hVhv~v~d~~~~i~~~n~l~~~lP~llALsANSPf~~G~dtg~~s~R~~i~~~~p--~~G-~p~~f 186 (287)
T TIGR02050 112 GYVARQQL--VFGLHVHVGVPSPDDAVAVLNRLLPWLPHLLALSASSPFWQGFDTGYASYRRNIFQAWP--TAG-LPPAF 186 (287)
T ss_pred HHHHHhHc--eeeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCcCCchHHHHHHHHHhCC--CCC-CCCcC
Confidence 46689999 99999999999999999999999999999999999999999999999999999999999 787 57799
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccccceeeccCCC
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADG 273 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~ 273 (396)
++|++|++|++.++++ | .|...++.|||+ ||+ +++ |+||||+||+
T Consensus 187 ~~~~~y~~~~~~l~~~--------g-~i~~~~~iww~v-----------Rp~-----~~~----------~tvE~Rv~D~ 231 (287)
T TIGR02050 187 GSWDAFEAYFADLLET--------G-VIDDDGDLWWDI-----------RPS-----PHF----------GTVEVRVADT 231 (287)
T ss_pred CCHHHHHHHHHHHHHc--------C-CcCCCCeeEEEe-----------ccC-----CCC----------CCeeEEcCCC
Confidence 9999999999999987 5 354455556665 554 333 3499999999
Q ss_pred Cc-hhhhchHHHHHHHhhcChhhh---hhhhhcCCCccHHHHHHHhhhhhhcCCCCcc
Q 016072 274 GP-WRRLCALPAFWVGLLYDEDSL---QNVLDMTADWTTGERQMLRNKVPKTGLKTPF 327 (396)
Q Consensus 274 ~p-~~~~~a~aAl~~gL~~~~~~~---~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~ 327 (396)
|| +++++++|||++||+...... +.....++.+...+|+| +|+|||++|.+
T Consensus 232 ~~~~~~~~~~aal~~~Lv~~~~~~~~~~~~~~~~~~~~~~~n~w---rAaR~Gl~~~l 286 (287)
T TIGR02050 232 CLNLEHAVAIAALIRALVEWLLREWPAPFPVPELDYWLLQENKW---RAARYGLDAEI 286 (287)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHhcCCCCCCCCHHHHHHHHH---HHHhhCCCCcc
Confidence 99 899999999999998765433 22334566777889999 99999999865
No 12
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=100.00 E-value=4.6e-50 Score=386.93 Aligned_cols=262 Identities=31% Similarity=0.466 Sum_probs=192.1
Q ss_pred cccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCC
Q 016072 20 EKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMP 99 (396)
Q Consensus 20 ~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p 99 (396)
++...++.++++..++...+.++++|||++|+||+++.+++++|.+.++.++++++++|++|+++|+||+..+.+.+++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~E~~~~qvEi~t~p~~~~~el~~~l~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~ 99 (288)
T PF04107_consen 20 APELEDEALIGLSPGGRVVTELPQSQVEISTPPCRSLAELREELRALRRALADAAAELGLRLVAAGTHPFARWRDQPITP 99 (288)
T ss_dssp CCCHHCCCCCCESESSEEEEESSTTEEEEE--SBSSHHHHHHHHHHHHHHHHHHHHCTTEEEE--SB-SS--GGGS---S
T ss_pred cHHHHhhhhcccccCCceeeccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEecCCCcCCCcccccCCC
Confidence 34455667778877777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHh
Q 016072 100 KGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWT 179 (396)
Q Consensus 100 ~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~ 179 (396)
++||+.|.++|+..|..+++||.++||+||+|+..++.+ ++++|.++.++|+++|||||||||+|++|||+|+|+.+|+
T Consensus 100 ~~RY~~~~~~~~~~g~~~~~~~~~g~hvhV~v~~~~e~~-v~~~n~~~~~~P~llALsANSP~~~G~~tg~~s~R~~~~~ 178 (288)
T PF04107_consen 100 KPRYRAMAEYFGRRGVLARRMMTCGAHVHVGVDDGDEAA-VRVMNALRPWLPVLLALSANSPFWEGRDTGYASYRSRIWE 178 (288)
T ss_dssp -HHHHCHHHHHGGH-SGCCSHHBHEEEEEEEESSSHHHH-HHHHHHHHTTHHHHHHHH--B-EETTEE-S-SBHGGGCCT
T ss_pred ChhhhHHHHHHhhhhhhhhhhhhcccceEEeCCCccHHH-HHHHHHHHHHhHHHHHHHcCCccccCCcCCCcCcHHHHHH
Confidence 999999999998877779999966666666666554444 8999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCc
Q 016072 180 DTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPE 259 (396)
Q Consensus 180 ~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~ 259 (396)
++| ++|++|..|+++++|++|+++++++|+|+ ..+..|||. ||+ ..+|
T Consensus 179 ~~p--~~~~~P~~~~~~~~~~~~~~~l~~~~~i~---------~~~~~~~~~-----------r~~---------~~~~- 226 (288)
T PF04107_consen 179 RWP--RCGGVPPAFDDWADYEEYVEYLLDTGVIF---------DRRMIWWDV-----------RPS---------PRFP- 226 (288)
T ss_dssp TST--TECS-GGGSSHHHCHHHHHHHHTTSTTES---------SGGGHHBSE-----------EEE---------TTTT-
T ss_pred hCC--CCCCCCCCCCchhHHHHHHHHHHhCCccc---------cchhhHhhc-----------CCC---------CCCC-
Confidence 999 47889999999999999999999986554 333567776 333 2222
Q ss_pred cccccceeeccCCCC---c-hhhhchHHHHHHHhhcChhhhhhhh---hcCCCccHHHHHHHhhhhhhcCC
Q 016072 260 VRLKRYLEMRGADGG---P-WRRLCALPAFWVGLLYDEDSLQNVL---DMTADWTTGERQMLRNKVPKTGL 323 (396)
Q Consensus 260 vR~~g~IEiR~~D~~---p-~~~~~a~aAl~~gL~~~~~~~~~~~---~~~~~~~~~~~~~~~~~aar~Gl 323 (396)
++|+|++|++ + .....+.+.++.++........... ..... ...+|.| +|+|+||
T Consensus 227 -----t~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~~~~~~~~~~~~~~~~~~-~~~e~~w---~A~r~gl 288 (288)
T PF04107_consen 227 -----TVELRVHDSTLFPPVRLRAVLEARLLDALPAPRLDAAPAFPPGPLYRD-LARENKW---RAARYGL 288 (288)
T ss_dssp -----EEEEEEEETT-EESSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGCC-HHHHHHH---HHHHCCC
T ss_pred -----hhHHHhhcCCCcHHHHHHHHHHHHHHHhchHhhhccccccCCccchHH-HHHHHHH---HHhccCC
Confidence 2788888887 3 3555555555555553322222211 12222 4577999 9999997
No 13
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional
Probab=99.95 E-value=3.6e-27 Score=252.17 Aligned_cols=309 Identities=14% Similarity=0.103 Sum_probs=218.8
Q ss_pred cccCCceee------ecC--CCcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCC
Q 016072 22 VMEGDYIIG------LKQ--GKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL 92 (396)
Q Consensus 22 ~~~~g~li~------~~~--~~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~ 92 (396)
++.+|++.. +.. ....|+.|.. +|+|+.|+||.++.++.++|....+.+...+ +.|..|++.|+||+..+
T Consensus 30 Vd~~g~la~t~~p~~lg~~~~~~~ittdfsesqlE~iTp~~~~~~~~~~~L~~l~~~~~~~~-~~~e~lwp~smpp~~~~ 108 (752)
T PRK02471 30 VDSDGKLALTPHPKAFGSRSFHPYIQTDFSESQLELITPVADSIEEVYRFLGALHDVASRSL-DEDEYLWPLSMPPILPD 108 (752)
T ss_pred ECCCCCCCCCCCchhhhcchhCCCcCchhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCcccccCCCCCCCc
Confidence 555676653 111 1467999996 9999999999999999999999999999999 88999999999999887
Q ss_pred -CCCCC-----CCcHHHHH-HHHhccccccchhhhhcccceeEeeeCCCCh------------HHHHHHHHH--------
Q 016072 93 -KDIPV-----MPKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE------------ADMIRKFRA-------- 145 (396)
Q Consensus 93 -~~~~~-----~p~~RY~~-m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~------------~~~~~~~n~-------- 145 (396)
.++++ ++++||+. |.++|+ .+.++ +||+|||+++++. ++++...|.
T Consensus 109 ~~~i~iA~~~~~~~~~Yr~~L~~ryg-----~~~q~--i~GiHvn~s~~d~~~~~l~~~~~~~~~~~~~~n~~Y~~l~rn 181 (752)
T PRK02471 109 EEEIPIAQLDNREDVQYREYLAKKYG-----KKKQM--ISGIHYNFSLGEALIQRLFEEQSEQQDYKDFKNDLYLKVARN 181 (752)
T ss_pred cccCcccccCCcchHHHHHHHHHHhC-----hhhcc--cCeEEEEeccCHHHHHHHHHhccccchHHHHHhHHHHHHHHh
Confidence 56788 99999999 888874 34445 9999999999987 566777765
Q ss_pred -HhhhHHHHHHHhhCCCCCC---------CCCCCCccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeee
Q 016072 146 -GLALQPIATALFANSPFTE---------GKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVY 215 (396)
Q Consensus 146 -~~~~~P~l~ALsaNSP~~~---------G~~tg~~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~ 215 (396)
.+ +.++|++||+|||||+ |.+||+.|+|...|..++ ++| +|..|.|+.+|.++++.++++
T Consensus 182 f~r-~~WLl~yL~gaSP~~~~sf~~~~~~~~~~~~~S~R~s~~g~~~--~~~-~~~~~~s~~~Y~~~l~~~i~~------ 251 (752)
T PRK02471 182 FLR-YRWLLTYLFGASPVAEADFFKQNKEYLNQDVRSLRNSKYGYVN--KED-VYVSYNSLEDYVSSLENAVES------ 251 (752)
T ss_pred hHH-HHHHHHHHhcCCccchhhhccCCcccCCCCceeeeccccCCCC--CCC-CCCCcCCHHHHHHHHHHHHHc------
Confidence 33 3344999999999999 999999999999999998 566 577999999999999999986
Q ss_pred ecCccccCCCCcHHHHhhCCCCCCCCCCCC----hhhhh-hhhcCCCCccccccceeeccCCCCc-hhhhchHHH--HHH
Q 016072 216 RKKKYIDCAGMSFRDFLAGKLPCLPGELPT----LNDWE-NHLTTIFPEVRLKRYLEMRGADGGP-WRRLCALPA--FWV 287 (396)
Q Consensus 216 ~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~----~~~~~-~~lst~~p~vR~~g~IEiR~~D~~p-~~~~~a~aA--l~~ 287 (396)
|. +...+..||++ ||+ ..++. ... +|||||+||.+| .+.-+.... |+.
T Consensus 252 --g~-l~~~~e~y~~i-----------Rpk~~~~~~~l~~~Gv----------~yiEvR~~D~~p~~~~GI~~~~~~Fl~ 307 (752)
T PRK02471 252 --GQ-LISEKEFYSPV-----------RLRGAKQDRSLLEKGI----------TYLEFRLFDLNPFEPYGISQETLDFVH 307 (752)
T ss_pred --CC-ccccccceecc-----------CCCCCCchHHHHhcCC----------CEEEEecccCCCCCccCCCHHHHHHHH
Confidence 74 66667777777 443 01111 011 359999999999 455555443 333
Q ss_pred HhhcChhhhhhhhhcCCCcc--HHHHHHHhhhhhhcCCCCccCCccHHHHHHHHHHHHHHhhhhcCCchh--chHHHHHH
Q 016072 288 GLLYDEDSLQNVLDMTADWT--TGERQMLRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKET--GFLNEVAE 363 (396)
Q Consensus 288 gL~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aar~Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~g~~e~--~~L~~l~~ 363 (396)
.++-...-... .+....+. ..+|.. +++..|-. ...++.+++.++++..++-.+.++...+ ..++.+.+
T Consensus 308 lfl~~~ll~~~-~~~~~~~~~~~~~n~~---~va~~g~~---~~~~~~~~a~~~l~~l~~~~~~l~~~~~y~~~~~~~~~ 380 (752)
T PRK02471 308 LFLLYLLWLDE-PEDTDQWVELADENNN---LIALEHPL---EALALAAEAELILDAMEDLVQHLGLPDEYQDLIKQLKE 380 (752)
T ss_pred HHHHHHhcCCC-CcCCHHHHHHHHHHHH---HHHhhCCC---CCccHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 33211110000 00111111 112222 46666621 2347888999999999988888876542 22333333
Q ss_pred HHH-cCCChHHHHHHHH
Q 016072 364 VVR-TGVTPAEKLLDMY 379 (396)
Q Consensus 364 ~l~-~g~t~A~~q~~~~ 379 (396)
++. ...|++.+.++..
T Consensus 381 ~~~~p~~t~s~~~~~~~ 397 (752)
T PRK02471 381 QLTDPEKTLSGRLLKQI 397 (752)
T ss_pred HhcCcccCHHHHHHHHH
Confidence 333 3568888876654
No 14
>PRK02107 glutamate--cysteine ligase; Provisional
Probab=98.85 E-value=5.9e-07 Score=92.31 Aligned_cols=121 Identities=15% Similarity=0.085 Sum_probs=82.0
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCCC---------CcHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRY 103 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-~~~~~---------p~~RY 103 (396)
-..||.... +|+|+.|+|+.++.++.+.|...-+.+...+ -+=.|++....|....+ ++++- .|..|
T Consensus 53 hp~ITTDfSEs~lE~ITP~~~s~~~~l~~L~~lh~~v~~~L--~dE~LWP~SMP~~l~~d~~IpIA~YG~sn~g~~k~~Y 130 (523)
T PRK02107 53 HKWITTDYSEALLEFITPVDGDIDHLLTFLRDLHRFTARKL--GDERLWPLSMPCYLPAEQDIPIAQYGTSNIGRLKTLY 130 (523)
T ss_pred CCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhC--CCCccCCCCCCCCCCCcccceecccCccccchhHHHH
Confidence 356999997 9999999999999999998877777766665 35778888888775422 23331 11223
Q ss_pred HHHHHhccccccchhhhhcccceeEeeeCCCCh--------------HHH-----HHHHHHHhhhHHHHHHHhhCCCCC
Q 016072 104 EIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE--------------ADM-----IRKFRAGLALQPIATALFANSPFT 163 (396)
Q Consensus 104 ~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~--------------~~~-----~~~~n~~~~~~P~l~ALsaNSP~~ 163 (396)
+.=. . ..+|+.| -.++|+|+|+.+++. .++ .+..+-...+..++.-||..||..
T Consensus 131 R~gL---~--~rYG~~m-Q~IsGIHyNfSl~~~~~~~l~~~~~~~~~~~f~s~~Y~~liRNf~Ry~WLl~YLfGASPa~ 203 (523)
T PRK02107 131 REGL---K--NRYGALM-QTISGVHYNFSLPEEFWQALCGEGSEASAKDFISEGYFALIRNYYRFGWVLPYLFGASPAL 203 (523)
T ss_pred HHHH---H--HHhChhh-hccceEEeecCCCHHHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 3211 1 1336554 459999999999721 122 234455667788999999999953
No 15
>TIGR01434 glu_cys_ligase glutamate--cysteine ligase. serve to protect against oxidative damage and participate in a biosynthetic or detoxification reactions.
Probab=98.79 E-value=1.2e-06 Score=89.95 Aligned_cols=121 Identities=13% Similarity=0.047 Sum_probs=80.4
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCCC---------CcHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRY 103 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-~~~~~---------p~~RY 103 (396)
-..||.... +|+|+.|+|+.++.++.+.|...-+.+..-+ -+=.|++....|....+ ++++. .|.-|
T Consensus 49 hp~ITTDfSEs~lE~ITP~~~s~~~~l~~L~~lh~~~~~~l--~~E~LWP~SMP~~l~~d~~IpIA~yG~sn~g~~k~~Y 126 (512)
T TIGR01434 49 HKWITTDFSEALLEFITPTDGDIAHMLTFLRDLHRFTASKL--GDERMWPLSMPCYIADGQDIEIAQYGTSNIGRFKTLY 126 (512)
T ss_pred CCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcC--CCCccCCCCCCCCCCCccccceeecCccccchhHHHH
Confidence 356999997 9999999999999999988877666665543 35677888777775422 23332 12223
Q ss_pred HHHHHhccccccchhhhhcccceeEeeeCCCCh--------------HHH-----HHHHHHHhhhHHHHHHHhhCCCCC
Q 016072 104 EIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE--------------ADM-----IRKFRAGLALQPIATALFANSPFT 163 (396)
Q Consensus 104 ~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~--------------~~~-----~~~~n~~~~~~P~l~ALsaNSP~~ 163 (396)
+.=. . ..+|+.| -.++|+|+|+.+++. .++ .+..|-...+..++.-||..||..
T Consensus 127 R~gL---~--~RYG~~m-Q~IsGIHyNfSl~~~~~~~l~~~~~~~~~~~f~~~~Y~~LiRNf~Ry~WLl~YLfGASPa~ 199 (512)
T TIGR01434 127 REGL---K--NRYGALM-QTISGIHYNFSLPMAFWQAKRGAEGGESAKDKISAGYFRLIRNYYRFGWVIPYLFGASPAI 199 (512)
T ss_pred HHHH---H--HHhChhh-hccceEEeecCCCHHHHHHHHHhcccchHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 3211 1 1236554 459999999999731 122 234455566789999999999953
No 16
>PF03074 GCS: Glutamate-cysteine ligase; InterPro: IPR004308 This family represents the catalytic subunit of glutamate-cysteine ligase (6.3.2.2 from EC), also known as gamma-glutamylcysteine synthetase (GCS). This enzyme catalyses the rate limiting step in the biosynthesis of glutathione. The eukaryotic enzyme is a dimer of a heavy chain and a light chain with all the catalytic activity exhibited by the heavy chain.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LVW_A 3LVV_A 3IG8_A 3IG5_A.
Probab=98.59 E-value=1.4e-07 Score=92.06 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=120.1
Q ss_pred cchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCC----CCCC
Q 016072 115 SLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA----GMLP 190 (396)
Q Consensus 115 ~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~----g~~p 190 (396)
.+|..|. .|.+||-++..+.+++-..+..+..+.|+++||||.||+|-|..+... .|..+-....++|| |..|
T Consensus 5 amgFGMG--~ccLQvTfqa~~i~eaR~lyDql~~~~Pi~LalsAasp~~~G~l~d~D-~RW~vis~svDdRt~~E~~~~p 81 (371)
T PF03074_consen 5 AMGFGMG--CCCLQVTFQACNIDEARYLYDQLAPLCPIMLALSAASPIFKGYLADVD-VRWNVISGSVDDRTPEERGLEP 81 (371)
T ss_dssp SGGGTTT--S-BEEEEEEESSHHHHHHHHHHHTTHHHHHHHHC----EETTEEBSBS--SHHHHHHHT----CCCCTS--
T ss_pred ccccccc--hhhhHHhHhccChHHHHHHHHhhcchhHHHHHHhhcChhhcceeeccc-cchHHHhhhhcCCCHHHcCCCc
Confidence 3466776 789999999999999999999999999999999999999999766554 77777666644454 2222
Q ss_pred ---------C-CCCCchh--------HHHH-----------HHHHhcCcceeeeecCccccC-CCCcHHHHhhCC-CCCC
Q 016072 191 ---------F-VFDDSFG--------FEQY-----------VDYALDVPMYFVYRKKKYIDC-AGMSFRDFLAGK-LPCL 239 (396)
Q Consensus 191 ---------~-~f~~~~~--------~~~y-----------~~~l~~~p~~~~~~~g~~i~~-~~~~~~d~~~~~-~~~~ 239 (396)
. -+++..- .+.| .+.|++ +| ++. -...+-..+-.+ +-.+
T Consensus 82 ~~~~~~~i~ksRy~si~~yis~~~~~~~~ynD~~~~~~~~~~~~l~~--------~g--~D~~la~h~ahlfirDPlvif 151 (371)
T PF03074_consen 82 LKKNKFRIPKSRYDSIDLYISNDPFNREEYNDINVPIDEDIYQRLLE--------NG--VDELLARHFAHLFIRDPLVIF 151 (371)
T ss_dssp SGGG----SS-SBSS-------STT--GGG--S-----HHHHHHHHS---------S----HHHHHHHHHHTTS--S--B
T ss_pred ccccccccccCcCCchhhhhcCCccchHHhCCCCCCCCHHHHHHHHH--------cC--CcHHHHHHHHHHcccCcHHHH
Confidence 0 1111100 0111 112222 12 110 000111111000 0000
Q ss_pred CC-----CCCChhhhhhhhcCCCCccccc--------c-ceeeccCCCCch-hhhchHHHHHHHhhcChhhhhhhhhcCC
Q 016072 240 PG-----ELPTLNDWENHLTTIFPEVRLK--------R-YLEMRGADGGPW-RRLCALPAFWVGLLYDEDSLQNVLDMTA 304 (396)
Q Consensus 240 ~g-----~rp~~~~~~~~lst~~p~vR~~--------g-~IEiR~~D~~p~-~~~~a~aAl~~gL~~~~~~~~~~~~~~~ 304 (396)
.+ ..-+.++|+.--||.|+++|.| | .||+|.++.|.+ -+..|++.|+.-|..........+ .+|
T Consensus 152 ~e~i~~dd~~~~dhFEniqStnWqt~RfKpPp~~s~iGWRVEfR~mEvQlTdfENAA~~~f~vLl~r~il~~~lnf-yiP 230 (371)
T PF03074_consen 152 SERIEQDDETSTDHFENIQSTNWQTVRFKPPPPNSSIGWRVEFRPMEVQLTDFENAAYSVFIVLLTRAILSFKLNF-YIP 230 (371)
T ss_dssp CGGGS--TTT--HHHHHHHTTSB-SEEEE--TT-TS--CEEEE---B--SSHHHHHHHHHHHHHHHHHHHHTTB------
T ss_pred HHHHHhccchhhhhHhhhcccCcccccccCCCCCCCCCeeEEeeccceecchHhHhHHHHHHHHHHHHHHhCCceE-Eec
Confidence 10 0123578888899999999987 4 499999999994 788888887766643322211100 011
Q ss_pred CccHHHHHHH--hhhhhhc-------CC----------CCcc---C-CccHHHHHH-------HHHHHHHHhhhhcCCch
Q 016072 305 DWTTGERQML--RNKVPKT-------GL----------KTPF---R-DGLLRHVAQ-------DVLKLSKDGLERRGFKE 354 (396)
Q Consensus 305 ~~~~~~~~~~--~~~aar~-------Gl----------~a~~---~-~~~~~~~~~-------~Ll~~a~~~L~~~g~~e 354 (396)
--...+|... ++.|+.. .+ .... . ..++.+++. -|+.+....|+..++..
T Consensus 231 iSkV~eNM~~A~~rdAv~~~kF~fr~~~~~~~~~~~~~~~~~~~~~eemTI~EI~nGk~g~FpGLI~lv~~Yl~s~~~d~ 310 (371)
T PF03074_consen 231 ISKVDENMKRAQKRDAVLNEKFWFRKDICNSENGCSNCSDSSEDEYEEMTIDEIFNGKNGEFPGLIPLVRSYLESINVDV 310 (371)
T ss_dssp HHHHHHHHHHTTBTTHHHH-EEEEES-S----------CSTT---EEEEEHHHHHH-TT-HHHHTHH-SS-GGGGGG-ST
T ss_pred ccHhHHHHHHHhhcchhhhCceeecccccccccccccccCCCccccccccHHHhccCCCCCccchHhHHHHHHHhcCCCH
Confidence 0011222110 1112211 11 1111 0 125555542 45666666676655432
Q ss_pred h------chHHHHHHHHHcC-CChHHHHHHHH
Q 016072 355 T------GFLNEVAEVVRTG-VTPAEKLLDMY 379 (396)
Q Consensus 355 ~------~~L~~l~~~l~~g-~t~A~~q~~~~ 379 (396)
+ .||+.+.++..-. .|.|.|+|+..
T Consensus 311 ~tr~~l~~YL~LIskRASGel~T~A~WiR~FV 342 (371)
T PF03074_consen 311 ETRCRLYQYLKLISKRASGELPTTATWIRNFV 342 (371)
T ss_dssp THH--HHHHHHHHHHHHTTSS--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCccCcHHHHHHHHH
Confidence 2 5777777777633 67899999965
No 17
>COG2918 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=98.41 E-value=1.7e-05 Score=78.71 Aligned_cols=130 Identities=17% Similarity=0.228 Sum_probs=85.2
Q ss_pred CCcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCC-----CCcHHHHHH
Q 016072 34 GKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV-----MPKGRYEIM 106 (396)
Q Consensus 34 ~~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-~~~~-----~p~~RY~~m 106 (396)
.-.-||.... +|+|+.|+|..++..+...|...=+.++..+... .+++....|..... ++++ +...|...+
T Consensus 53 thp~ItTDFsEslLEfITP~~~~id~~l~~L~diH~~~~~kl~~E--~lWPlSmP~~lp~EedI~iAqyg~s~~gr~K~~ 130 (518)
T COG2918 53 THPWITTDFAESLLEFITPVTKDIEDTLTFLRDIHRFVARKLGDE--RLWPLSMPCYLPAEEDIPIAQYGTSNTGRFKTL 130 (518)
T ss_pred cCCcccchhhHhhhhhcCCCCccHHHHHHHHHHHHHHHHhcCCCc--eecCCCCCCCCCcccCcceeecCCCCCchHHHH
Confidence 3466999997 9999999999999998887766666655555444 77887777765432 3333 233555444
Q ss_pred HH-hccccccchhhhhcccceeEeeeCCCCh---------------HHH-----HHHHHHHhhhHHHHHHHhhCCC----
Q 016072 107 RN-YMPKVGSLGLDMMFRTCTVQVNLDFSSE---------------ADM-----IRKFRAGLALQPIATALFANSP---- 161 (396)
Q Consensus 107 ~~-~~~~~g~~g~~~~~~~~s~qVhv~~~~~---------------~~~-----~~~~n~~~~~~P~l~ALsaNSP---- 161 (396)
.+ .+.+ .+|..| -+++|+|-|..++.. .|+ .++.+-...+..++.-||+.||
T Consensus 131 YRegL~~--rYGk~m-Q~ISGIHYNFSlp~~~w~~l~~~~~~e~s~~d~~s~~Y~~liRNf~R~~Wil~YLfGASPai~s 207 (518)
T COG2918 131 YREGLKN--RYGKLM-QTISGIHYNFSLPEAFWDALYGEQNEEKSARDFISAGYFKLIRNFYRFGWILPYLFGASPAICS 207 (518)
T ss_pred HHHHHHH--HhhhHH-hhhhceeecccCCHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHH
Confidence 42 2221 235544 448999999988831 111 2334445567788888999999
Q ss_pred -CCCCCCC
Q 016072 162 -FTEGKPN 168 (396)
Q Consensus 162 -~~~G~~t 168 (396)
|+.|+.+
T Consensus 208 sflk~~~~ 215 (518)
T COG2918 208 SFLKGRPT 215 (518)
T ss_pred HHhcCCCC
Confidence 6677766
No 18
>PF04262 Glu_cys_ligase: Glutamate-cysteine ligase ; InterPro: IPR007370 This is a group of bacterial glutamate-cysteine ligases that carry out the first step of the glutathione biosynthesis pathway according to the following equation: ATP + L-glutamate + L-cysteine = ADP + phosphate + L-glutamyl-L-cysteine (L-aminohexanoate can replace glutamate). ; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LN6_A 3LN7_B 1VA6_B 2D33_B 1V4G_B 2D32_A 3NZT_A.
Probab=98.36 E-value=1.4e-06 Score=86.03 Aligned_cols=120 Identities=21% Similarity=0.273 Sum_probs=76.3
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCCC---C------cHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---P------KGRY 103 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-~~~~~---p------~~RY 103 (396)
-..||.... +|+|+.|+|+.++.++.+.|...-+.+...+++ =.|++....|....+ ++++. + |.-|
T Consensus 51 hpyItTDFSEsqlE~ITP~~~s~~~al~~L~~Lh~~v~~~L~~--E~LWP~SMPp~L~~d~~IpiA~y~~s~~g~~k~~Y 128 (377)
T PF04262_consen 51 HPYITTDFSESQLELITPPFDSIEEALQFLEDLHQFVRRNLED--ELLWPLSMPPYLPDDDDIPIAQYGSSNAGRMKTVY 128 (377)
T ss_dssp -SSEEESSBTTEEEEEEEEBSSHHHHHHHHHHHHHHHHHHSTT--EEE--SSS-SS-STTCCS-B---SSCHHHHHHHHH
T ss_pred CCCcCcchhHHHHHhhcCCccCHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCCCCCccCCceeecCCcccchhHHHH
Confidence 357999996 999999999999999999998888888877766 677888888876533 34442 2 2334
Q ss_pred HH-HHHhccccccchhhhhcccceeEeeeCCCChHHHH----------------------HHHHHHhhhHHHHHHHhhCC
Q 016072 104 EI-MRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMI----------------------RKFRAGLALQPIATALFANS 160 (396)
Q Consensus 104 ~~-m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~----------------------~~~n~~~~~~P~l~ALsaNS 160 (396)
+. +..+ +|+.| -.++|+|+|+.+++ +++ ++.+-...+..++..||..|
T Consensus 129 R~~L~~r------YG~~~-Q~isGIH~NfS~~~--~l~~~l~~~~~~~~~~~~fkn~~Y~~l~rnf~ry~WLl~YLfGAS 199 (377)
T PF04262_consen 129 REGLAHR------YGKKM-QMISGIHYNFSFPE--ELWKKLYEEQDSYESLQDFKNDLYFKLARNFLRYRWLLTYLFGAS 199 (377)
T ss_dssp HHHHHHH------H-TGG-GG--EEEEEEEE-H--HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCCHHHHHC--B
T ss_pred HHHHHHH------hCccc-cccceeEeccCCCH--HHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 32 2222 35544 24899999999883 232 33445566778999999999
Q ss_pred CCCCC
Q 016072 161 PFTEG 165 (396)
Q Consensus 161 P~~~G 165 (396)
|..+.
T Consensus 200 P~~~~ 204 (377)
T PF04262_consen 200 PAAEK 204 (377)
T ss_dssp SEEEG
T ss_pred hhhhh
Confidence 98643
No 19
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. gamma-glutamyltripeptides of the form gamma-Glu-Cys-X(aa). The N-terminal region is similar to proteobacterial glutamate-cysteine ligase. The C-terminal region is homologous to cyanophycin synthetase of cyanobacteria and, more distantly, to D-alanine-D-alanine ligases. Members of this family are found in Listeria and Enterococcus, Gram-positive lineages in which glutathione is produced (see PUBMED:8606174), and in Pasteurella multocida, a Proteobacterium. In Clostridium acetobutylicum, adjacent genes include separate proteins rather than a fusion protein.
Probab=98.25 E-value=6e-05 Score=81.05 Aligned_cols=121 Identities=14% Similarity=0.149 Sum_probs=73.4
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCC--CCCCC-----cHHHHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKD--IPVMP-----KGRYEIM 106 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~--~~~~p-----~~RY~~m 106 (396)
-..||.... +|+|+.|+|+.++ ++...|...-+.+...+. +=.|++....|....++ +++.. ...|+.
T Consensus 40 hp~IttDfsEs~lE~iTp~~~~~-~~~~~L~~l~~~~~~~l~--~E~lWP~SMP~~l~~~~~~i~iA~~~~~~~~~YR~- 115 (737)
T TIGR01435 40 HPYIQTDFSESQLELITPVTDSI-DVYRWLENIHNVSLRSEP--EELLWPLSMPPILPAEEDIIEYATLDSPDDVKYRE- 115 (737)
T ss_pred CCCCCCCccHHHHHhcCCCCCCH-HHHHHHHHHHHHHHhhCC--CccccCCCCCCCCCCcccccccccCCChhHhHHHH-
Confidence 467999997 9999999999997 355544443333333332 35778888777744222 23211 122322
Q ss_pred HHhccccccchhhhhcccceeEeeeCCCCh---------------HHH-----HHHHHHHhhhHHHHHHHhhCCCCCC
Q 016072 107 RNYMPKVGSLGLDMMFRTCTVQVNLDFSSE---------------ADM-----IRKFRAGLALQPIATALFANSPFTE 164 (396)
Q Consensus 107 ~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~---------------~~~-----~~~~n~~~~~~P~l~ALsaNSP~~~ 164 (396)
++. ..+|+.| -.+||+|+|+.++++ .++ .++.+-...+..++.-||..||..+
T Consensus 116 --~L~--~rYG~~~-q~isGiH~Nfs~~~~~~~~l~~~~~~~~~~~~f~n~~Y~~l~rnf~ry~Wll~YLfGASP~~~ 188 (737)
T TIGR01435 116 --YLA--KGYGKKK-QMVSGIHYNFSFPEALIDGLYAEQHENESKRDFKNRLYLKVAKNFLRYRWLLIYLTGASPVYE 188 (737)
T ss_pred --HHH--HHhCchh-hccceEEEeecCCHHHHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCCchhh
Confidence 221 1235543 348999999999731 112 2334455667789999999999653
No 20
>KOG3754 consensus Gamma-glutamylcysteine synthetase [Coenzyme transport and metabolism]
Probab=97.79 E-value=1.9e-05 Score=78.12 Aligned_cols=158 Identities=18% Similarity=0.198 Sum_probs=95.6
Q ss_pred cceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCC----CCCCC--------
Q 016072 124 TCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA----GMLPF-------- 191 (396)
Q Consensus 124 ~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~----g~~p~-------- 191 (396)
.|-+||-++..+-++|-..+..+..+.|+++||||.||+|.|..+.- ..|..+-....++|| |..|-
T Consensus 250 ccCLQvTFQA~ni~eAR~LYDqL~pi~PimlAlSAatP~frGylad~-DcRWnVIs~sVDdRT~eErgl~PL~~~~~~I~ 328 (640)
T KOG3754|consen 250 CCCLQVTFQACNIDEARYLYDQLTPITPIMLALSAATPAFRGYLADQ-DCRWNVISGSVDDRTPEERGLAPLKNKKLRIP 328 (640)
T ss_pred ceeeEeeeeccCchHHHHHHHhhccchHHHHHHhccChhhccccccc-ccccceeeccccCCChhhcCCccccccceecc
Confidence 66799999999999999999999999999999999999999986544 367666666655666 43331
Q ss_pred --CCCCchh--------H--------HHHHHHHhcCcceeee---ecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhh
Q 016072 192 --VFDDSFG--------F--------EQYVDYALDVPMYFVY---RKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWE 250 (396)
Q Consensus 192 --~f~~~~~--------~--------~~y~~~l~~~p~~~~~---~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~ 250 (396)
-.+|... | ++..+.|++--+=-.. -+.-+|.++-.+|.+-+..+. .-+-++++
T Consensus 329 KSRYdSvD~yls~~~~~YNDvpl~ide~vy~~Ll~~~iD~~LAkH~AHlfiRDp~~~F~e~i~qdd------~~ss~HFE 402 (640)
T KOG3754|consen 329 KSRYDSVDLYLSPCKRKYNDVPLTIDEKVYGRLLEGGIDELLAKHVAHLFIRDPVSLFEEKIHQDD------KTSSDHFE 402 (640)
T ss_pred cccccchheeecCCCCccCCCCccccHHHHHHHHhcCccHHHHHHHHHHhhcChHHHHHHHHhccc------ccchhhhh
Confidence 0011000 0 1111222221000000 000011222234444444321 11457888
Q ss_pred hhhcCCCCccccc--------c-ceeeccCCCCch-hhhchHHHHHHH
Q 016072 251 NHLTTIFPEVRLK--------R-YLEMRGADGGPW-RRLCALPAFWVG 288 (396)
Q Consensus 251 ~~lst~~p~vR~~--------g-~IEiR~~D~~p~-~~~~a~aAl~~g 288 (396)
.-.||-|.+.|.| | .||+|.+-+|.+ =+..|+..|+.-
T Consensus 403 niqSTNWqtmRFKPPpp~s~iGWRVEFRp~EvQltDFENaAy~~fVvl 450 (640)
T KOG3754|consen 403 NIQSTNWQTMRFKPPPPNSSIGWRVEFRPMEVQLTDFENAAYSVFVVL 450 (640)
T ss_pred hhcccccceeccCCcCCCCCCceeEEeeeeeEEeccccccceEEeehh
Confidence 8899999999998 4 499999999984 344455444433
No 21
>PLN02284 glutamine synthetase
Probab=95.17 E-value=0.16 Score=50.64 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=62.8
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccccc
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 115 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 115 (396)
.+..|-| +|.||+..+. +.-++++.+..+...++.+|+++|+...- .|..-.
T Consensus 188 ~~h~E~apGQ~Ei~l~~~-d~l~aAD~~~~~K~vvk~vA~~~Gl~ATF---MPKP~~----------------------- 240 (354)
T PLN02284 188 GINGEVMPGQWEFQVGPV-VGISAGDQLWVARYILERITEIAGVVVSF---DPKPIP----------------------- 240 (354)
T ss_pred EEEcCcCCCceEEEecCC-cHHHHHHHHHHHHHHHHHHHHHhCCEEEE---cCCCCC-----------------------
Confidence 3667777 9999999995 67778999999999999999999987643 343210
Q ss_pred chhhhhcccceeEeeeCCCC--h---HH-HHHHHHHH-hhhHHHHHHHhhCC
Q 016072 116 LGLDMMFRTCTVQVNLDFSS--E---AD-MIRKFRAG-LALQPIATALFANS 160 (396)
Q Consensus 116 ~g~~~~~~~~s~qVhv~~~~--~---~~-~~~~~n~~-~~~~P~l~ALsaNS 160 (396)
+ + ..+.|+|+|+..-+ . .. +-..+-.+ ...+|.+.|+++||
T Consensus 241 -~-~--~~GSGmH~H~SL~~~~~~gg~~~~~~~l~~~~l~h~~~l~a~~~NS 288 (354)
T PLN02284 241 -G-D--WNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGN 288 (354)
T ss_pred -C-C--CccCcceeecChhhcccCCcHHHHHHHHHHHHHHHHHHhhhhhcCc
Confidence 1 1 12677888888653 1 11 22222222 56678888887644
No 22
>PF12224 Amidoligase_2: Putative amidoligase enzyme; InterPro: IPR022025 This family of proteins are likely to act as amidoligase enzymes [] Protein in this family are found in conserved gene neighbourhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes) [].
Probab=94.89 E-value=0.061 Score=50.66 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=30.6
Q ss_pred cccceeEeeeCCCC----hHHHHHHHHHHhhhHHHHHHHhhCCC
Q 016072 122 FRTCTVQVNLDFSS----EADMIRKFRAGLALQPIATALFANSP 161 (396)
Q Consensus 122 ~~~~s~qVhv~~~~----~~~~~~~~n~~~~~~P~l~ALsaNSP 161 (396)
..+||+||||+..+ .+++.+.+..+..+.|.|..+..-++
T Consensus 110 ~~scg~HVHv~~~~~~~~~~~l~~l~~~~~~~E~~l~~~~~~~~ 153 (252)
T PF12224_consen 110 NDSCGFHVHVGPEPPSFSLETLKRLAKAFWLFEPWLRRLLPPDR 153 (252)
T ss_pred cCCeeEEEEECCCCCCccHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 44799999999654 34778888888888899888865554
No 23
>PLN03036 glutamine synthetase; Provisional
Probab=94.70 E-value=0.21 Score=51.01 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=63.6
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccccc
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 115 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 115 (396)
.+..|-+ +|.||+..++ +.-++.+.+..++..++++|+++|+...- +|..-.
T Consensus 248 ~~~~E~gpGQ~Ei~l~~~-d~L~aAD~~~l~R~ivk~VA~~~Gl~ATF---MPKP~~----------------------- 300 (432)
T PLN03036 248 GTNGEVMPGQWEYQVGPS-VGIDAGDHIWCSRYILERITEQAGVVLTL---DPKPIE----------------------- 300 (432)
T ss_pred EEEcCcCCCceEEecCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEEE---cCCcCC-----------------------
Confidence 4677887 9999999997 66677899999999999999999987642 443210
Q ss_pred chhhhhcccceeEeeeCCCC--hHHHHHH----HH-HHhhhHHHHHHHhhCC
Q 016072 116 LGLDMMFRTCTVQVNLDFSS--EADMIRK----FR-AGLALQPIATALFANS 160 (396)
Q Consensus 116 ~g~~~~~~~~s~qVhv~~~~--~~~~~~~----~n-~~~~~~P~l~ALsaNS 160 (396)
| + ..++|+|+|+..-+ .+...+. +. ......+.+.|+++||
T Consensus 301 -g-d--~~GSGmHiH~Sl~d~r~~gg~~~~~~~i~gl~l~H~~~i~A~~~Ns 348 (432)
T PLN03036 301 -G-D--WNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGN 348 (432)
T ss_pred -C-C--cCCCCceeEechhhccccchHHHHHHHHhhHHHHHHHHHHhhhcCh
Confidence 1 1 22778888888664 2111222 22 2456678888887744
No 24
>TIGR03105 gln_synth_III glutamine synthetase, type III. This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.
Probab=94.36 E-value=0.34 Score=49.74 Aligned_cols=45 Identities=27% Similarity=0.211 Sum_probs=40.2
Q ss_pred eeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEe
Q 016072 38 ISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG 83 (396)
Q Consensus 38 i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~ 83 (396)
+..|-| +|+||+..+. +.-++++.+..+...++++|+++|+...-
T Consensus 177 ~~~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~k~~vk~vA~~~Gl~atF 222 (435)
T TIGR03105 177 NDHEDANGQFEMNFTYA-DALTTADRHAFFRYMVKEIAEKHGMRATF 222 (435)
T ss_pred eecCcCCCceEEecCcc-hHHHHHHHHHHHHHHHHHHHHHhCCEEEe
Confidence 677888 9999999997 78889999999999999999999998753
No 25
>TIGR00653 GlnA glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation.
Probab=92.90 E-value=0.95 Score=46.78 Aligned_cols=46 Identities=28% Similarity=0.187 Sum_probs=40.3
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEe
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG 83 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~ 83 (396)
.+..|-| +|.||+..++ +.-++++.+..+...++.+|+++|+...-
T Consensus 201 ~~~~E~gpGQ~Ei~l~~~-~~l~aAD~~~~~k~~ik~vA~~~G~~ATF 247 (460)
T TIGR00653 201 VHHHEVATGQHEIDFKFD-TLLKTADDIQTYKYVVKNVARKHGKTATF 247 (460)
T ss_pred eeecCcCCCceeEecCCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4666888 9999999995 68889999999999999999999987643
No 26
>PRK09469 glnA glutamine synthetase; Provisional
Probab=92.41 E-value=1.4 Score=45.68 Aligned_cols=47 Identities=23% Similarity=0.183 Sum_probs=40.9
Q ss_pred cceeeccC--ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEe
Q 016072 36 QSISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG 83 (396)
Q Consensus 36 ~~i~~Ep~--~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~ 83 (396)
..+..|-| +|+||+..+. +.-++++.+..+...++.+|+++|+...-
T Consensus 208 ~~~h~E~g~~GQ~Ei~l~~~-d~L~aaD~~~~~k~~vk~va~~~g~~atF 256 (469)
T PRK09469 208 EAHHHEVATAGQNEVATRFN-TMTKKADEIQIYKYVVHNVAHAFGKTATF 256 (469)
T ss_pred EEeeCCCCCCCeEEEeccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 34777876 6999999995 79999999999999999999999997643
No 27
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism]
Probab=90.96 E-value=1.3 Score=45.41 Aligned_cols=45 Identities=29% Similarity=0.396 Sum_probs=40.8
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
.+-.|-| +|.||+.. ..++-++++++..+...++.+|++||+...
T Consensus 184 ~~hhEva~gQ~EI~~~-~~~~l~~AD~~~~~K~vvk~vA~~hG~~aT 229 (443)
T COG0174 184 AIHHEVAPGQFEINLR-FDDALKAADQIVIFKYVVKEVAEKHGLTAT 229 (443)
T ss_pred eccccccCCceEEecC-CCCHHHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 4677887 99999999 889999999999999999999999999874
No 28
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6.3.1.2 from EC) (GS) [] plays an essential role in the metabolism of nitrogen by catalyzing the condensation of glutamate and ammonia to form glutamine. There seem to be three different classes of GS [, , ]: Class I enzymes (GSI) are specific to prokaryotes, and are oligomers of 12 identical subunits. The activity of GSI-type enzyme is controlled by the adenylation of a tyrosine residue. The adenylated enzyme is inactive (see IPR001637 from INTERPRO). Class II enzymes (GSII) are found in eukaryotes and in bacteria belonging to the Rhizobiaceae, Frankiaceae, and Streptomycetaceae families (these bacteria have also a class-I GS). GSII are octamer of identical subunits. Plants have two or more isozymes of GSII, one of the isozymes is translocated into the chloroplast. Class III enzymes (GSIII) have been found in Bacteroides fragilis. in Butyrivibrio fibrisolvens. It is a hexamer of identical chains and in some protozoa. It is much larger (about 700 amino acids) than the GSI (450 to 470 amino acids) or GSII (350 to 420 amino acids) enzymes. While the three classes of GS's are clearly structurally related, the sequence similarities are not so extensive.; GO: 0004356 glutamate-ammonia ligase activity, 0006807 nitrogen compound metabolic process; PDB: 2J9I_E 3ZXV_D 1HTQ_D 1HTO_F 2BVC_F 2WGS_G 3ZXR_B 2WHI_D 3NG0_A 1LGR_C ....
Probab=90.25 E-value=1.2 Score=42.22 Aligned_cols=45 Identities=27% Similarity=0.389 Sum_probs=37.8
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
.+..|-| +|.||+..|+..+ ++.+.+..+...++++|+++|+...
T Consensus 87 ~~h~E~gpgQ~Ei~~~~~~~l-~aaD~~~~~k~~ik~vA~~~Gl~at 132 (259)
T PF00120_consen 87 QIHHEVGPGQYEINLGPCDPL-EAADNLVLFKEIIKEVARKHGLTAT 132 (259)
T ss_dssp EEEEESSTTEEEEEEEEEECH-HHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ccccccchHhhccccccCcHH-HHHHHHHHHHHHHHHHHHHcCCcee
Confidence 3677888 9999999977655 5678888999999999999998764
No 29
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=86.98 E-value=0.047 Score=52.78 Aligned_cols=47 Identities=45% Similarity=0.563 Sum_probs=41.3
Q ss_pred hhhhhhhcCCCCccccccceeeccCCCCchhhhchHHHHHHHhhcCh
Q 016072 247 NDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDE 293 (396)
Q Consensus 247 ~~~~~~lst~~p~vR~~g~IEiR~~D~~p~~~~~a~aAl~~gL~~~~ 293 (396)
.+|..|.++.||++|.++++|+|++|++|.....+..++..+.+++.
T Consensus 228 ~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~~~~~~~~~~~~~~~~~~ 274 (288)
T PF04107_consen 228 VELRVHDSTLFPPVRLRAVLEARLLDALPAPRLDAAPAFPPGPLYRD 274 (288)
T ss_dssp EEEEEEETT-EESSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGCC
T ss_pred hHHHhhcCCCcHHHHHHHHHHHHHHHhchHhhhccccccCCccchHH
Confidence 56678999999999999999999999999888888899999998776
No 30
>PF09899 DUF2126: Putative amidoligase enzyme (DUF2126); InterPro: IPR018667 This domain is found in bacterial transglutaminase and transglutaminase-like proteins. Their exact function is, as yet, unknown.
Probab=69.96 E-value=1.3e+02 Score=33.01 Aligned_cols=53 Identities=25% Similarity=0.462 Sum_probs=44.3
Q ss_pred cceeecc-CceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCC
Q 016072 36 QSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL 92 (396)
Q Consensus 36 ~~i~~Ep-~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~ 92 (396)
-.+++|+ .+.+-+=.+|++++ +.+...+..+..+|++.|+-++--|+.|-..+
T Consensus 323 TAL~vE~R~G~l~vFlPP~~~l----e~yL~LiaaiE~tA~~l~~pv~lEGY~PP~D~ 376 (819)
T PF09899_consen 323 TALCVEPRDGRLHVFLPPLESL----EDYLDLIAAIEATAAELGMPVVLEGYPPPRDP 376 (819)
T ss_pred eEEEEEEeCCEEEEEcCCcccH----HHHHHHHHHHHHHHHHcCCCEEEecCCcCCCC
Confidence 4588999 59999999999775 45566888899999999999999999987654
No 31
>PF14395 COOH-NH2_lig: Phage phiEco32-like COOH.NH2 ligase-type 2
Probab=60.61 E-value=61 Score=30.69 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=44.2
Q ss_pred cceeeccCc----eEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCC
Q 016072 36 QSISLEPGG----QFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWG 91 (396)
Q Consensus 36 ~~i~~Ep~~----qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~ 91 (396)
+.++++-.. ..|+.-.|-++..++...+.+.+....+.....++..++ |..|+..
T Consensus 37 D~~~~~~~~~~~PlaElRP~P~~~P~~L~~~i~~~l~~A~~~i~~~~l~W~A-G~mP~~g 95 (261)
T PF14395_consen 37 DARRLRGRRGIYPLAELRPAPSPDPAELFENIRRALREAARRIPDRSLEWLA-GSMPFPG 95 (261)
T ss_pred cceeecCccccccceecCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEec-CCCCCCC
Confidence 445554443 789999999999999999999999999888888887665 7777753
No 32
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=47.50 E-value=1e+02 Score=31.19 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-----CCCCCCcHHHHHHHHhcc
Q 016072 55 TLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-----DIPVMPKGRYEIMRNYMP 111 (396)
Q Consensus 55 ~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-----~~~~~p~~RY~~m~~~~~ 111 (396)
+-.++.+.|..+++++.++|++.|++++. ||-..+. ..-++..+-|+.|.+..+
T Consensus 204 ~~e~lwenl~yFL~~ViPvAEe~GV~LAi---HPDDPP~~i~GlpRIvst~ed~~rll~~V~ 262 (394)
T TIGR00695 204 DEEKLRDNLAFFLQEILPVAEEYGVQMAI---HPDDPPRPILGLPRIVSTIEDMQWLVATSD 262 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCEEEE---CCCCCCccccCCCcccCCHHHHHHHHHhcC
Confidence 56889999999999999999999999976 6644332 112355577888887764
No 33
>PF01883 DUF59: Domain of unknown function DUF59; InterPro: IPR002744 This family includes prokaryotic proteins of unknown function. The family also includes PhaH (O84984 from SWISSPROT) from Pseudomonas putida. PhaH forms a complex with PhaF (O84982 from SWISSPROT), PhaG (O84983 from SWISSPROT) and PhaI (O84985 from SWISSPROT), which hydroxylates phenylacetic acid to 2-hydroxyphenylacetic acid []. So members of this family may all be components of ring hydroxylating complexes.; PDB: 3LNO_C 3CQ3_A 3CQ2_D 2CU6_B 3CQ1_A 3UX3_B 3UX2_A 1WCJ_A 1UWD_A.
Probab=45.59 E-value=42 Score=24.77 Aligned_cols=62 Identities=11% Similarity=0.145 Sum_probs=39.6
Q ss_pred HHHHHHHHHhHhccCCcccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHH
Q 016072 4 EQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQ 69 (396)
Q Consensus 4 ~~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~ 69 (396)
+.|.+.|+.+...+--..+-+-|.+=++.-+++.+++ .+++.++-|+-...+.+++...+..
T Consensus 2 ~~V~~aL~~v~dP~~~~~iv~~g~V~~i~i~~~~V~v----~l~l~~~~~~~~~~l~~~i~~~l~~ 63 (72)
T PF01883_consen 2 QAVRDALKQVKDPELGKDIVELGMVRDISIEGGKVSV----SLELPTPACPAAEPLREEIREALKA 63 (72)
T ss_dssp HHHHHHHTT-BETTTSSBTTTTTSEEEEEECTCEEEE----EE--SSTTHTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCCHHHcCCeeEEEEECCEEEE----EEEECCCCchHHHHHHHHHHHHHHh
Confidence 3566777776554323446666777777777777766 6777778888777787777766653
No 34
>COG4871 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.48 E-value=1.3e+02 Score=26.44 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=60.4
Q ss_pred HHHHHhHhccCCcccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCC
Q 016072 8 ELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQ 87 (396)
Q Consensus 8 ~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~ 87 (396)
.+|..|+.-|+-..+-+.-.++-+.+..--||+=+.+-| +.+..++..|+.+.+....+.++++-++-| .+..
T Consensus 46 ~ilplla~l~P~anY~~kk~~l~~~kgerIitiy~sGkV--sm~~ikdedEAkeilgel~d~ineA~~kg~-----d~s~ 118 (193)
T COG4871 46 GILPLLAPLFPRANYSDKKNILILQKGERIITIYGSGKV--SMTMIKDEDEAKEILGELMDIINEAIAKGG-----DASD 118 (193)
T ss_pred hhHHHhHhhCCCcccccccceEEEeeccEEEEEccCCeE--EeeeecCHHHHHHHHHHHHHHHHHHHHccC-----CCCC
Confidence 445555555666666666667777777666666665554 556788999999999999999999988865 4555
Q ss_pred CCCCCCCCCCCCcHHHHHH
Q 016072 88 PKWGLKDIPVMPKGRYEIM 106 (396)
Q Consensus 88 P~~~~~~~~~~p~~RY~~m 106 (396)
|.-. ..+.|..-|+.+
T Consensus 119 prek---~rV~p~dVykyL 134 (193)
T COG4871 119 PREK---VRVGPMDVYKYL 134 (193)
T ss_pred chhh---cccChHHHHHhC
Confidence 5432 345666666543
No 35
>PF09981 DUF2218: Uncharacterized protein conserved in bacteria (DUF2218); InterPro: IPR014543 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2JPI_A.
Probab=37.25 E-value=98 Score=24.28 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=43.1
Q ss_pred HHHHHHHhHhccCCcc---cccCCceeeecCCCcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHH
Q 016072 6 IAELLNSIAERFDWEK---VMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQ 69 (396)
Q Consensus 6 v~~~l~~l~~~~~~~~---~~~~g~li~~~~~~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~ 69 (396)
-.+.|+.|+++|+.+- .+++.-.|.+...--.++.+++ =.+.+..+.-+++..++..+...+..
T Consensus 10 ~~ryl~qLc~Hf~hk~~v~~d~~~g~i~f~~G~~~l~a~~~~L~l~vea~~~~~L~~~~~vv~~HL~r 77 (89)
T PF09981_consen 10 ASRYLKQLCKHFAHKFEVEWDEDSGRITFPFGTCTLSAEPDALTLRVEAPDAEALARLEDVVARHLER 77 (89)
T ss_dssp HHHHHHHHHHHTTTSSEEEE-SSEEEEE-SSS-EEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEcCCceEEEeCCEEEEEEeCCCeEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 4678999999998632 4555556666666666777776 57777777777777777777666654
No 36
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=29.50 E-value=2.5e+02 Score=27.91 Aligned_cols=84 Identities=19% Similarity=0.240 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCC--CCCCcHHHHHHHHhccccccchhhhhcccceeEeeeC
Q 016072 55 TLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDI--PVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLD 132 (396)
Q Consensus 55 ~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~--~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~ 132 (396)
+-.++.+.|.-+|+++.++|++.|++++.-.-+|-....-. -++..+-|+.|.+.... ...|..+ |+ =+++
T Consensus 182 d~~~L~~nL~yFL~~ViPVAEe~gVkmaiHPDDPP~pi~GLpRIvst~ed~~~ll~~vdS-p~NGiTl--Ct----GS~G 254 (362)
T COG1312 182 DEEKLWENLAYFLKEVIPVAEEVGVKMAIHPDDPPWPIFGLPRIVSTIEDYQRLLEMVDS-PYNGITL--CT----GSLG 254 (362)
T ss_pred CHHHHHHHHHHHHHhhcchHHhcCceEEeCCCCCCccccCcchhcCCHHHHHHHHHhccC-ccCCEEE--ec----cccc
Confidence 56778889999999999999999999987555543332212 24667889988876542 2223322 22 2566
Q ss_pred CCChHHHHHHHHH
Q 016072 133 FSSEADMIRKFRA 145 (396)
Q Consensus 133 ~~~~~~~~~~~n~ 145 (396)
....+|.+.+.+.
T Consensus 255 ~~~dnDl~~mir~ 267 (362)
T COG1312 255 ARADNDLPEMIRE 267 (362)
T ss_pred cCccccHHHHHHH
Confidence 5544555555543
No 37
>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism]
Probab=27.96 E-value=70 Score=31.87 Aligned_cols=48 Identities=31% Similarity=0.461 Sum_probs=37.8
Q ss_pred eeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCC
Q 016072 38 ISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 89 (396)
Q Consensus 38 i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~ 89 (396)
+-.|-. +|.|++.+||..++. .++|-..+..|+++|+++|+-. ..+|.
T Consensus 200 ~N~EvmPgQwEfqvGp~~GI~~-gD~lw~aR~il~rVae~~Gvia---sf~pK 248 (380)
T KOG0683|consen 200 INVEVMPGQWEFQVGPCEGISM-GDQLWMARYILHRVAEKFGVIA---SFDPK 248 (380)
T ss_pred ccccccCceeEEeecchhcccc-hhhHHHHHHHHHHHHHHhCeeE---EecCC
Confidence 345666 899999999999865 5777788899999999999754 34554
No 38
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=25.02 E-value=1.6e+02 Score=25.89 Aligned_cols=48 Identities=23% Similarity=0.306 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhccc
Q 016072 65 SHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPK 112 (396)
Q Consensus 65 ~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~ 112 (396)
.++.-+..+++.++..+++.|+.+.+.....+.++.+|++.+.+.+..
T Consensus 14 GHl~ii~~a~~~~D~lii~i~s~~~~~k~~~p~~~~eR~~mi~~al~~ 61 (165)
T TIGR01527 14 GHLEVIKKIAEEVDELIIGIGSAQESHTLENPFTAGERILMITQSLKE 61 (165)
T ss_pred HHHHHHHHHHHHCCEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 356667778888888888888776554445577889999999887753
No 39
>PF12324 HTH_15: Helix-turn-helix domain of alkylmercury lyase; InterPro: IPR024259 Alkylmercury lyase (EC:4.99.1.2) cleaves the carbon-mercury bond of organomercurials such as phenylmercuric acetate. This entry represents the N-terminal helix-turn-helix domain.; PDB: 3FN8_B 3F2G_B 3F0P_A 3F2F_B 3F2H_A 3F0O_B 1S6L_A.
Probab=24.15 E-value=82 Score=24.21 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=17.3
Q ss_pred HHHHHHHHHhHhccCCcccccCCceeee
Q 016072 4 EQIAELLNSIAERFDWEKVMEGDYIIGL 31 (396)
Q Consensus 4 ~~v~~~l~~l~~~~~~~~~~~~g~li~~ 31 (396)
++|..+|..+ +...+|++|+|||.
T Consensus 53 e~v~~~L~~~----p~tEyD~~GrIVG~ 76 (77)
T PF12324_consen 53 EEVRAALAAM----PDTEYDDQGRIVGY 76 (77)
T ss_dssp HHHHHHHHH-----TTSEEETTSEEEES
T ss_pred HHHHHHHHhC----CCceEcCCCCeecC
Confidence 4566666665 35778999999995
No 40
>TIGR02945 SUF_assoc FeS assembly SUF system protein. Members of this family belong to the broader Pfam family pfam01883, or Domain of Unknown Function DUF59. Many members of DUF59 are candidate ring hydroxylating complex subunits. However, members of the narrower family defined here all are found in genomes that carry the FeS assembly SUF system. For 70 % of these species, the member of this protein family is found as part of the SUF locus, usually immediately downstream of the sufS gene.
Probab=23.30 E-value=2.2e+02 Score=22.32 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=27.4
Q ss_pred HHHHHHHHhHhccCCcccccCCceeeecCCC-cceeeccCceEEeecCcccCHHHHHHHHHHHH
Q 016072 5 QIAELLNSIAERFDWEKVMEGDYIIGLKQGK-QSISLEPGGQFELSGAPLETLHQTCAEVNSHL 67 (396)
Q Consensus 5 ~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~-~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l 67 (396)
.|.+.|+.+....-...+-+-|.+-.+.-++ ..+++ .+++..+.|+-...+...+...+
T Consensus 5 ~I~~~L~~v~dP~l~~~lv~~g~V~~i~v~~~~~v~i----~l~l~~p~~~~~~~l~~~i~~al 64 (99)
T TIGR02945 5 AVIEALKTVYDPEIPVNIYELGLIYDIDVDDDGHVDI----QMTLTAPNCPVAGSMPGEVENAV 64 (99)
T ss_pred HHHHHHcCCCCCCCCCCeecCCCeeEEEECCCCeEEE----EEEECCCCCChHHHHHHHHHHHH
Confidence 4555555553322112344455555554443 44433 45555565654555544443333
No 41
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain. N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
Probab=21.63 E-value=2.2e+02 Score=25.46 Aligned_cols=46 Identities=17% Similarity=0.067 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcc
Q 016072 66 HLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMP 111 (396)
Q Consensus 66 ~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~ 111 (396)
++..+..+++..+..++..|+.+..+....+.+..+|++++...+.
T Consensus 15 Hl~~i~~a~~~~~~vii~i~s~~~~~~~~~p~~~~eR~~mi~~~~~ 60 (181)
T cd02168 15 HLAVVLIALEKAKKVIILIGSARTARNIKNPWTSEEREVMIEAALS 60 (181)
T ss_pred HHHHHHHHHHHCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHh
Confidence 5566778888888777878887654433456788999999988764
No 42
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=20.43 E-value=3.6e+02 Score=26.24 Aligned_cols=48 Identities=25% Similarity=0.455 Sum_probs=36.7
Q ss_pred HHHHHHHHHHcCCeEEec---cCCCCCCCCCCCCCCcHHHHHHHHhccccc
Q 016072 67 LYQVKAVAEEMGIGFLGI---GFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 114 (396)
Q Consensus 67 l~~l~~~a~~~g~~l~~~---G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g 114 (396)
-+-+++.+++.|++++++ |.-++.++.++.-++.+|-..+.+.+...+
T Consensus 51 FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 51 FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELG 101 (297)
T ss_pred hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcC
Confidence 456788999999999988 444555566777889999888888776543
No 43
>COG4004 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.11 E-value=4.5e+02 Score=20.88 Aligned_cols=66 Identities=21% Similarity=0.336 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHhHhccCCcccccCCceeeecCCCcceeeccC-ceEEeecCcccC---HHHHHHHHHHHHHHHH
Q 016072 2 KYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLET---LHQTCAEVNSHLYQVK 71 (396)
Q Consensus 2 ~~~~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~-~qiE~~t~p~~~---~~~l~~~l~~~l~~l~ 71 (396)
+++.|..+|+++ +|+-..+++.+|+-.+..+.|.+-|. .-+=++|.-..+ .......++.++..+-
T Consensus 13 ~~dri~~~l~e~----g~~v~~eGD~ivas~pgis~ieik~E~kkL~v~t~~~~~d~~~l~~~ktyndfleklt 82 (96)
T COG4004 13 DPDRIMRGLSEL----GWTVSEEGDRIVASSPGISRIEIKPENKKLLVNTTDYTDDETKLQTAKTYNDFLEKLT 82 (96)
T ss_pred CHHHHHHHHHHh----CeeEeecccEEEEecCCceEEEEecccceEEEecccccCchhHHHHHHHHHHHHHHHh
Confidence 355666666554 48888888888888888888888884 666666643332 2333334444444443
Done!