Query 016072
Match_columns 396
No_of_seqs 139 out of 1118
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:24:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016072.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016072hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gwd_A Glutamate cysteine liga 100.0 1.7E-79 5.7E-84 623.8 34.7 395 2-396 55-449 (449)
2 1r8g_A Hypothetical protein YB 100.0 1.2E-58 4.2E-63 460.7 22.2 309 35-395 47-370 (372)
3 3ln6_A Glutathione biosynthesi 100.0 2.8E-29 9.4E-34 268.3 19.4 305 35-386 52-401 (750)
4 1va6_A Glutamate--cysteine lig 100.0 3E-29 1E-33 255.0 12.0 310 35-379 54-455 (518)
5 3ln7_A Glutathione biosynthesi 99.9 2.7E-25 9.3E-30 237.1 17.5 297 35-379 51-397 (757)
6 3nzt_A Glutamate--cysteine lig 99.9 2.5E-23 8.4E-28 210.8 16.5 305 35-379 65-455 (525)
7 3ig5_A Glutamate-cysteine liga 99.6 2.7E-13 9.1E-18 138.6 23.3 147 36-186 91-325 (692)
8 3fky_A Glutamine synthetase; b 93.0 0.29 1E-05 47.7 8.8 45 37-82 189-234 (370)
9 2d3a_A Glutamine synthetase; l 93.0 0.16 5.5E-06 49.3 6.7 45 36-81 187-232 (356)
10 1f52_A Glutamine synthetase; A 92.0 0.58 2E-05 47.0 9.6 89 38-158 209-313 (468)
11 4hpp_A Probable glutamine synt 91.1 0.64 2.2E-05 46.4 8.8 93 37-161 176-285 (443)
12 2ojw_A Glutamine synthetase; a 89.7 1.1 3.9E-05 43.7 9.0 46 36-82 210-256 (384)
13 3ng0_A Glutamine synthetase; G 89.6 1.5 5.1E-05 44.1 10.1 90 37-158 211-316 (473)
14 3qaj_A Glutamine synthetase; A 89.5 1.7 5.9E-05 43.2 10.3 44 38-82 186-230 (444)
15 4acf_A Glutamine synthetase 1; 85.4 3.6 0.00012 41.4 9.9 90 38-159 224-330 (486)
16 3o6x_A Glutamine synthetase; t 80.4 2.9 0.0001 43.9 7.0 45 37-82 282-327 (729)
17 2j9i_A Glutamate-ammonia ligas 37.6 8 0.00027 38.1 0.5 47 36-82 169-216 (421)
18 2bp3_S Platelet glycoprotein I 35.6 9.2 0.00032 21.4 0.3 15 252-266 8-22 (26)
No 1
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=100.00 E-value=1.7e-79 Score=623.82 Aligned_cols=395 Identities=89% Similarity=1.474 Sum_probs=372.5
Q ss_pred ChHHHHHHHHHhHhccCCcccccCCceeeecCCCcceeeccCceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 016072 2 KYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 81 (396)
Q Consensus 2 ~~~~v~~~l~~l~~~~~~~~~~~~g~li~~~~~~~~i~~Ep~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l 81 (396)
.|..+.+||+.+...++|++.+++|++|++.+++..|++||++|||++|+||+++.++++++...+..++++++++|+.|
T Consensus 55 ~~~~~~~lL~~l~~~~g~~~~~~~~~~~~l~~~~~~i~~E~~~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l 134 (449)
T 2gwd_A 55 KYDQIAELLNSIAERFEWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 134 (449)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEETTEEEEEEETTEEEEECTTCCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEE
T ss_pred ChHHHHHHHHHHHHhhccCccccccccccccCCCceEEecCCceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCce
Confidence 35578999999988889999999999999999989999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCCCCCcHHHHHHHHhccccccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCC
Q 016072 82 LGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSP 161 (396)
Q Consensus 82 ~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP 161 (396)
++.|+||+..+.+++++|++||+.|.+++++.|..|++||.++||+||||++++++++++++|.++++.|+++|||||||
T Consensus 135 ~~~G~~P~~~~~~~~~~~~~RY~~m~~~~~~~g~~g~~mm~~~~g~qVhl~~~~~~~~~~~~~~~~~~~P~llALsAnSP 214 (449)
T 2gwd_A 135 LGMGFQPKWRREDIPTMPKGRYDIMRNYMPKVGSLGLDMMLRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSP 214 (449)
T ss_dssp ECCSBCSSCCGGGSCCCSCHHHHHHHHHGGGTCSSHHHHHHHBCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred eeccCCCCCCccccCCCCchHHHHHHHHHHHhchhHHHHhhcceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999988888999999999999999877888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCC
Q 016072 162 FTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPG 241 (396)
Q Consensus 162 ~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g 241 (396)
||+|++|||+|+|+.+|+++|++|+|.+|+.|+|+++|++|+++++++|+||+.++|.+++..+.+|.||+++.++.+.|
T Consensus 215 f~~G~~tg~~S~R~~~w~~~~~~r~G~~p~~f~~~~~~e~yv~~l~~~~~~~v~~~g~~~~~~~~~f~~~l~~~l~~~~~ 294 (449)
T 2gwd_A 215 FTEGKPNGFLSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFAYRNGKYVDCTGMTFRQFLAGKLPCLPG 294 (449)
T ss_dssp EETTEECSCSBHHHHHTTSSCGGGCSCCGGGGSTTCSHHHHHHHHHHSCEEEEEETTEEEEEEEECHHHHHTTCCTTSTT
T ss_pred ccccCcCCCcchHHHHHhhCCCCcCCCCCcccCCccCHHHHHHHHHcCCceEeecCCccccCCcchHHHhhhcccccccC
Confidence 99999999999999999999988999889899999999999999999999999999988888899999999998877888
Q ss_pred CCCChhhhhhhhcCCCCccccccceeeccCCCCchhhhchHHHHHHHhhcChhhhhhhhhcCCCccHHHHHHHhhhhhhc
Q 016072 242 ELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVPKT 321 (396)
Q Consensus 242 ~rp~~~~~~~~lst~~p~vR~~g~IEiR~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~ 321 (396)
++|++.||..|+||+||+||||++||+|+||+||+.+++|++||++||+++...++......+.|...+.+.+|.+|+|+
T Consensus 295 ~~p~~~d~~~~~st~~~~vRpk~~iE~R~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~AaR~ 374 (449)
T 2gwd_A 295 ELPTYNDWENHLTTIFPEVRLKRYMEMRGADGGPWRRLCALPAFWVGLLYDEDVLQSVLDLTADWTPAEREMLRNKVPVT 374 (449)
T ss_dssp CCCCHHHHHHHHTTCCCSEEESSSEEEEEEECCCHHHHHHHHHHHHHHHSSHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhhhcccCcccCcCCceEeecCCCCCcHHHHHHHHHHHHHHhhHHhhhhhHhhcCCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999987777777777888876644445599999
Q ss_pred CCCCccCCccHHHHHHHHHHHHHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHcCccccChHHHHhhhcC
Q 016072 322 GLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYHGKWRESVDPVFEELLY 396 (396)
Q Consensus 322 Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~~~~~~vv~~~~~~~~~ 396 (396)
||+|.+.+.++.+++.+||+.++++|+++|..+..+|+.|.+++++|+|+|+||++.|+++|.++|+.+++|++|
T Consensus 375 Gl~a~~~~~~~~~~~~~ll~~a~~~L~~~g~~~~~~l~~l~~~~~~g~t~A~~~l~~~~~~~~~~v~~~~~~~~~ 449 (449)
T 2gwd_A 375 GLKTPFRDGLLKHVAEDVLKLAKDGLERRGYKEVGFLNAVTEVVRTGVTPAENLLEMYNGEWGQSVDPVFQELLY 449 (449)
T ss_dssp GGGSEETTEEHHHHHHHHHHHHHHHHHHHTSCCGGGGHHHHHHHHHTCCHHHHHHHHHHTTTTTCSTTHHHHTBC
T ss_pred ccCCccCCCcHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCHHHHHHHHHhccccCcHHHHHHHhcC
Confidence 999999889999999999999999999999776679999999999999999999999999999999999999987
No 2
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=100.00 E-value=1.2e-58 Score=460.68 Aligned_cols=309 Identities=15% Similarity=0.102 Sum_probs=258.8
Q ss_pred Ccceeecc-CceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccc
Q 016072 35 KQSISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 113 (396)
Q Consensus 35 ~~~i~~Ep-~~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 113 (396)
+..|+.|+ ++|||++|+||+++.+++++|.+.++.++++++++|+.|++.|+||+..+.+.++++|+||+.|.++|+
T Consensus 47 ~~~it~E~~~~qlEl~t~p~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g-- 124 (372)
T 1r8g_A 47 AGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFG-- 124 (372)
T ss_dssp SSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCG--
T ss_pred CCcccchhhccEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHH--
Confidence 46899999 699999999999999999999999999999999999999999999999888889999999999999885
Q ss_pred ccchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCCCCCCCCC
Q 016072 114 GSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 193 (396)
Q Consensus 114 g~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~g~~p~~f 193 (396)
..++.|+ +||+||||++++++++++++|.++.+.|+++|||||||||+|++|||+|+|..+|+++| ++|. |+.|
T Consensus 125 -~~~~~~~--i~g~hvhv~~~~~~~~~~~~~~~~~~~p~l~aL~anSPf~~G~~tg~~s~R~~~~~~~p--~~g~-~~~f 198 (372)
T 1r8g_A 125 -YLIQQAT--VFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFP--DNGP-MPWV 198 (372)
T ss_dssp -GGGCSCC--BCEEEEEEECSSHHHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTST--TCSS-CCCC
T ss_pred -HHHHhhc--eeeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcHHHHHHHHHcCC--ccCC-Cccc
Confidence 4577788 99999999999999999999999999999999999999999999999999999999997 8885 6699
Q ss_pred CCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccc---cceeecc
Q 016072 194 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRG 270 (396)
Q Consensus 194 ~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~---g~IEiR~ 270 (396)
+++++|++|++.++++ |. + .|.+++|++|||| +|||+|+
T Consensus 199 ~~~~~y~~~~~~~l~~--------g~-~-----------------------------~~~~~~y~~vRpk~~~~~IE~R~ 240 (372)
T 1r8g_A 199 SNWQQFEALFRCLSYT--------TM-I-----------------------------DSIKDLHWDIRPSPHFGTVEVRV 240 (372)
T ss_dssp SSHHHHHHHHHHHTTS--------SS-C-----------------------------SSGGGCCCSEEEETTTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHC--------CC-c-----------------------------CcCCeeccccccCCCCCceEEec
Confidence 9999999999999987 42 2 3678999999999 5999999
Q ss_pred CCCCc-hhhhchHHHHHHHhhcChhhhhh-hhhcCCCccHHHHHHHhhhhhhcCCCCccC------CccHHHHHHHHHHH
Q 016072 271 ADGGP-WRRLCALPAFWVGLLYDEDSLQN-VLDMTADWTTGERQMLRNKVPKTGLKTPFR------DGLLRHVAQDVLKL 342 (396)
Q Consensus 271 ~D~~p-~~~~~a~aAl~~gL~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~------~~~~~~~~~~Ll~~ 342 (396)
||++| .++.++++||++||+++...... .....+.+...+|+| +|+|+|+++.+. ..++++++.+||+.
T Consensus 241 ~D~~p~~~~~~a~aa~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~---~aar~Gl~~~l~~~~~~~~~~~~~~~~~ll~~ 317 (372)
T 1r8g_A 241 MDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRF---QACRYGLEGVITDPHTGDRRPLTEDTLRLLEK 317 (372)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHH---HHHHHGGGSEEECTTTCCEEEHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---HHHHhCCCCccccCCCCcEeeHHHHHHHHHHH
Confidence 99999 69999999999999987522111 122334555777888 899999998653 24999999999999
Q ss_pred HHHhhhhcCCchhchHHHHHHHHHcCCChHHHHHHHHc---CccccChHHHHhhhc
Q 016072 343 SKDGLERRGFKETGFLNEVAEVVRTGVTPAEKLLDMYH---GKWRESVDPVFEELL 395 (396)
Q Consensus 343 a~~~L~~~g~~e~~~L~~l~~~l~~g~t~A~~q~~~~~---~~~~~vv~~~~~~~~ 395 (396)
++++|+.+|+.+ +++.|.+++++| |+|+||++.|+ +++++||+.++++|+
T Consensus 318 ~~~~l~~~g~~~--~l~~l~~~~~~g-~~a~~q~~~~~~~~~~l~~v~~~~~~~~~ 370 (372)
T 1r8g_A 318 IAPSAHKIGASS--AIEALHRQVVSG-LNEAQLMRDFVADGGSLIGLVKKHCEIWA 370 (372)
T ss_dssp SHHHHHHHTCHH--HHHHHHHHHHHC-CCHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHH--HHHHHHHHHHcC-ChHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 999999999754 689999999988 89999999994 459999999999873
No 3
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.96 E-value=2.8e-29 Score=268.33 Aligned_cols=305 Identities=13% Similarity=0.055 Sum_probs=216.4
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCC-----CcHHHHH-HH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVM-----PKGRYEI-MR 107 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~-----p~~RY~~-m~ 107 (396)
...|+.|.. +|+|+.|+||.++.++.++|....+.+.+.+. .|..|++.|++|+....++++. +++||+. |.
T Consensus 52 ~~~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~-~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~ 130 (750)
T 3ln6_A 52 HPYIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSIN-HDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLE 130 (750)
T ss_dssp CSSEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSC-TTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHH
Confidence 467999996 99999999999999999999999999998876 7889999999998665667776 6999998 77
Q ss_pred HhccccccchhhhhcccceeEeeeCCCChHH-------------------HHHHHHHHhhhHHHHHHHhhCCCCC-----
Q 016072 108 NYMPKVGSLGLDMMFRTCTVQVNLDFSSEAD-------------------MIRKFRAGLALQPIATALFANSPFT----- 163 (396)
Q Consensus 108 ~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~~-------------------~~~~~n~~~~~~P~l~ALsaNSP~~----- 163 (396)
++|+ ++.++ +||+|||+++++... .++++|....+.|+|++||+|||||
T Consensus 131 ~ryg-----~~~q~--i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f~ 203 (750)
T 3ln6_A 131 KTYG-----KLIQS--ISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDFL 203 (750)
T ss_dssp HHHC-----TGGGG--CCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCS
T ss_pred HHhC-----hhhce--eeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCcccccccc
Confidence 7773 45566 999999999997642 2356778888999999999999999
Q ss_pred CCCCCCC-ccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCCCCCCCC
Q 016072 164 EGKPNGY-LSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGE 242 (396)
Q Consensus 164 ~G~~tg~-~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~~~~~g~ 242 (396)
.|++|++ .|+|+..|..++ ++| +|..|+|+.+|.++++.++++ |. +...+..||++
T Consensus 204 ~g~~~~~~~S~R~s~~g~~~--~~~-~~~~~~s~~~Y~~~l~~~v~~--------g~-l~~~~e~y~~i----------- 260 (750)
T 3ln6_A 204 DQKLNNPVRSLRNSHLGYVN--HKD-IRISYTSLKDYVNDLENAVKS--------GQ-LIAEKEFYSPV----------- 260 (750)
T ss_dssp SCTTTCCCSBSTTSSSSSCC--CTT-CCCCCSSHHHHHHHHHHCCTT--------TC---CGGGCCCSE-----------
T ss_pred CCCCCCceeeeeccccCCCC--CCC-CCCCcCCHHHHHHHHHHHHHC--------CC-cccCCceeEee-----------
Confidence 6788884 799999999998 566 577999998888888777775 64 55656666666
Q ss_pred CCChhhhhhhhcCCCCcccc--c--cceeeccCCCCc-hhhhchH--HHHHHHhhcChhhhhhhhhcCCCc--cHHHHHH
Q 016072 243 LPTLNDWENHLTTIFPEVRL--K--RYLEMRGADGGP-WRRLCAL--PAFWVGLLYDEDSLQNVLDMTADW--TTGERQM 313 (396)
Q Consensus 243 rp~~~~~~~~lst~~p~vR~--~--g~IEiR~~D~~p-~~~~~a~--aAl~~gL~~~~~~~~~~~~~~~~~--~~~~~~~ 313 (396)
||+ ..+|.--+ + +|||+|+||.+| ....+.. +.|+..++......... ...+.+ ...+|++
T Consensus 261 Rpk---------~~~p~~~l~~~Gi~yiE~R~~D~~p~~~~GI~~~~~~fl~~fll~~l~~~~~-~~~~~e~~~~~~n~~ 330 (750)
T 3ln6_A 261 RLR---------GSKACRNYLEKGITYLEFRTFDLNPFSPIGITQETVDTVHLFLLALLWIDSS-SHIDQDIKEANRLND 330 (750)
T ss_dssp EEE---------SCSSTTTTTTTCCCEEEECCCCCCTTSTTSCCHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHH
T ss_pred cCC---------CCCCchhHhhCCCCeEEEEeecCCCCCcccccHHHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHHH
Confidence 333 12221111 1 479999999999 3544443 33444433211111110 000111 1334555
Q ss_pred HhhhhhhcCCCCccCCccHHHHHHHHHHHHHHhhhhcCCchh--chHHHHHHHHH-cCCChHHHHHHHHc-CccccC
Q 016072 314 LRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKET--GFLNEVAEVVR-TGVTPAEKLLDMYH-GKWRES 386 (396)
Q Consensus 314 ~~~~aar~Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~g~~e~--~~L~~l~~~l~-~g~t~A~~q~~~~~-~~~~~v 386 (396)
+++++|- ....++++++.++++...+.++.+|...+ ..++.+.+.+. ...|++-+.++... +++.+.
T Consensus 331 ---~va~~gp---~~~~~~~~~~~~ll~~l~~~a~~l~~~~~y~~~l~~~~~~~~~p~~t~s~~~~~~~~~~~~~~~ 401 (750)
T 3ln6_A 331 ---LIALSHP---LEKLPNQAPVSDLVDAMQSVIQHFNLSPYYQDLLESVKRQIQSPELTVAGQLLEMIEGLSLETF 401 (750)
T ss_dssp ---HHHHSCT---TSCCCTTSCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHSGGGSHHHHHHHHCBTTBCHHH
T ss_pred ---HHHHhCC---CCeecHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhcCcccCHHHHHHHHHHhcCHHHH
Confidence 7999992 22447888899999999998888887643 34555555555 34788888777653 444433
No 4
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=99.96 E-value=3e-29 Score=254.98 Aligned_cols=310 Identities=16% Similarity=0.134 Sum_probs=215.6
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCC-CCCCC---------CCcHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPV---------MPKGRY 103 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~-~~~~~---------~p~~RY 103 (396)
+..|+.|+. +|||+.|+||.++.++.++|....+.+...+ .|..|++.++.|.... .++++ ..|.||
T Consensus 54 ~~~IttDfsEsqlE~iTpv~~s~~eal~~L~~l~~~v~~~l--~~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Y 131 (518)
T 1va6_A 54 HKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNM--GDERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLY 131 (518)
T ss_dssp CSSEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSS--TTCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHH
T ss_pred CCCcCCCcchhheeecCCCCCCHHHHHHHHHHHHHHHHHHc--CCCeEeecCCCCCCCCCCCCccccccccccCccchHH
Confidence 467999996 9999999999999999999999999999888 4999999777666431 22333 467999
Q ss_pred H-HHHHhccccccchhhhhcccceeEeeeCCCCh-------------------HHHHHHHHHHhhhHHHHHHHhhCCC--
Q 016072 104 E-IMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE-------------------ADMIRKFRAGLALQPIATALFANSP-- 161 (396)
Q Consensus 104 ~-~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~-------------------~~~~~~~n~~~~~~P~l~ALsaNSP-- 161 (396)
+ .|.++|+ ++.++ +||+|||+++++. +..++++|....+.|+|++||+|||
T Consensus 132 r~~L~~rYG-----~~~q~--IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP~~ 204 (518)
T 1va6_A 132 REGLKNRYG-----ALMQT--ISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAI 204 (518)
T ss_dssp HHHHHHHHC-----HHHHT--CCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBSEE
T ss_pred HHHHHHHhC-----cchhe--eeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9 4888873 34555 9999999999987 3667888899999999999999999
Q ss_pred ---CCCCCCCCCc---------------cchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcc-----eeeeecC
Q 016072 162 ---FTEGKPNGYL---------------SMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPM-----YFVYRKK 218 (396)
Q Consensus 162 ---~~~G~~tg~~---------------s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~-----~~~~~~g 218 (396)
||.|++||+. |+|...|......++| +|..|.|+.+|.++++.++++|- |=+.++|
T Consensus 205 ~~sF~~g~~t~l~~~~~~~~t~y~p~atSlR~s~~Gy~n~~q~~-l~~~y~sl~~Y~~~l~~~i~tp~~~y~~ig~~~~g 283 (518)
T 1va6_A 205 SSSFLQGKPTSLPFEKTESGMYYLPYATSLRLSDLGYTNKSQSN-LGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDG 283 (518)
T ss_dssp CGGGC----CCSCCEECTTSCEECTTCSBGGGSTTSSCCGGGTT-SCCCSSCHHHHHHHHHHHHTCBCHHHHTTCSEETT
T ss_pred cccccCCCCCCccccccccccccCCCcccccccccCCCCCccCC-CCCCcCCHHHHHHHHHHHHhCccchhhhhcccccc
Confidence 8899999884 9998888544322566 56699999999999999998651 2222233
Q ss_pred ccccCCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCccccc------------------cceeeccCCCCc-hh--
Q 016072 219 KYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK------------------RYLEMRGADGGP-WR-- 277 (396)
Q Consensus 219 ~~i~~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~------------------g~IEiR~~D~~p-~~-- 277 (396)
.++.-.. .....-+.+|++|||| +|||||++|.+| .+
T Consensus 284 ~~~Qlnt----------------------g~Lq~e~E~Y~~IRpk~~~~~ge~~~~aL~~~Gi~yIEvR~~DvnPf~~~G 341 (518)
T 1va6_A 284 KRLQINS----------------------NVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIG 341 (518)
T ss_dssp EECCSCS----------------------BSCSSGGGCCCSEEEECCCCTTCCHHHHHHHHCCCEEEEEEEECCTTSTTS
T ss_pred chhcccc----------------------ccccccCeeeeccccCCCCCCCcCcHHHHHhCCCCeEEEEeccCCCCcccc
Confidence 2111000 0001234567777775 369999999999 46
Q ss_pred hhchHHHHHHHhhcChhhhhhh-hhcCCCccHHHHHHHhhhhhhcCCCCccC------C--ccHHHHHHHHHHHHHHhhh
Q 016072 278 RLCALPAFWVGLLYDEDSLQNV-LDMTADWTTGERQMLRNKVPKTGLKTPFR------D--GLLRHVAQDVLKLSKDGLE 348 (396)
Q Consensus 278 ~~~a~aAl~~gL~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aar~Gl~a~~~------~--~~~~~~~~~Ll~~a~~~L~ 348 (396)
.+...++|+.+++......+.. ......+...+|.| +|+++|+++.+. . .++.+++.+|++...+.++
T Consensus 342 i~~~~~~fl~~fl~~~ll~~~~~~~~~~~~~~~~N~~---~va~~G~~~~l~l~~~~~~~~~~~~~~~~~ll~~l~~~A~ 418 (518)
T 1va6_A 342 VDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWN---RVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQ 418 (518)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCCCCCHHHHHHTHHHHH---HHHHHTTCTTCEECSTTSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCCcCCChHHHHHHHHHHH---HHHHhCCCccccccCCCCcCcccHHHHHHHHHHHHHHHHH
Confidence 6777889998886444211110 00001112345666 899999987441 3 4789999999999999988
Q ss_pred hcCCc--hhchHHHHHHHH---H-cCCChHHHHHHHH
Q 016072 349 RRGFK--ETGFLNEVAEVV---R-TGVTPAEKLLDMY 379 (396)
Q Consensus 349 ~~g~~--e~~~L~~l~~~l---~-~g~t~A~~q~~~~ 379 (396)
.+|+. ...|...+.+.. . ...|++-+.++..
T Consensus 419 ~L~~~~~~~~y~~~l~~~~~~~~~P~lT~sarll~~~ 455 (518)
T 1va6_A 419 TLDSINGGEAYQKVCDELVACFDNPDLTFSARILRSM 455 (518)
T ss_dssp HHHHHHCSSHHHHHHHHHHTTTTCGGGSHHHHHHHHH
T ss_pred HhCCCcCChHHHHHHHHHHHHhcCcccCHHHHHHHHH
Confidence 88752 112444444333 2 2367787776655
No 5
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.93 E-value=2.7e-25 Score=237.12 Aligned_cols=297 Identities=16% Similarity=0.100 Sum_probs=200.3
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCC-CCCCCC-----CcHHHHH-H
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPVM-----PKGRYEI-M 106 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~-~~~~~~-----p~~RY~~-m 106 (396)
...|+.|.. +|+|+.|+||.++.++.++|....+.+.+.+. .|..|++.|++|.... .++++. +|+||+. |
T Consensus 51 ~~~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~-~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L 129 (757)
T 3ln7_A 51 HPYIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLP-EEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYL 129 (757)
T ss_dssp CSSEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSC-TTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHH
T ss_pred CCCCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHH
Confidence 467999996 99999999999999999999999999888865 5777888777665321 233333 6899996 8
Q ss_pred HHhccccccchhhhhcccceeEeeeCCCChH---------------HH-----HHHHHHHhhhHHHHHHHhhCCCCC---
Q 016072 107 RNYMPKVGSLGLDMMFRTCTVQVNLDFSSEA---------------DM-----IRKFRAGLALQPIATALFANSPFT--- 163 (396)
Q Consensus 107 ~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~---------------~~-----~~~~n~~~~~~P~l~ALsaNSP~~--- 163 (396)
.++|+ ++.++ +||+|||+++++.. ++ ++.+|....+.|+|++||+|||+|
T Consensus 130 ~~ryG-----~~~q~--i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~~~~~ 202 (757)
T 3ln7_A 130 VKIYG-----KNKQM--VSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPTVESA 202 (757)
T ss_dssp HHHHC-----SHHHH--CCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC----
T ss_pred HHHhc-----hhhce--eeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcccccc
Confidence 77773 45556 99999999999742 11 345677778999999999999999
Q ss_pred --CCC----CCCC-ccchHHHHhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcceeeeecCccccCCCCcHHHHhhCCC
Q 016072 164 --EGK----PNGY-LSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKL 236 (396)
Q Consensus 164 --~G~----~tg~-~s~R~~iw~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~~~~~~~g~~i~~~~~~~~d~~~~~~ 236 (396)
.|. ++++ .|+|...|..++ ++| +|..|+|+.+|.++++.++++ |. +...+..||++
T Consensus 203 f~~g~~~~~~~~~~~S~R~s~~gy~~--~~~-~~~~~~s~~~Y~~~l~~~v~~--------g~-l~~~~e~y~~i----- 265 (757)
T 3ln7_A 203 YFKDGSPLAKGQFVRSLRSSQYGYVN--DPE-INVSFDSVEKYVESLEHWVST--------GK-LIAEKEFYSNV----- 265 (757)
T ss_dssp CTTTCSSCCSSCCCSBSTTSSSSCCC--CSS-CCCCCSCHHHHHHHHHHHHHC---------C-CSSSTTCCCSE-----
T ss_pred cccCCCCCCCCCCcccccccccCCCC--CCC-CCCCcCCHHHHHHHHHHHHHc--------CC-ccccCceeeee-----
Confidence 552 2334 399999999997 566 577999998888888888886 74 66666666666
Q ss_pred CCCCCCCCChhhhhhhhcCCCCcccc----ccceeeccCCCCc-hhhhchH--HHHHHHhhcChhhhhhhhhcCCCc--c
Q 016072 237 PCLPGELPTLNDWENHLTTIFPEVRL----KRYLEMRGADGGP-WRRLCAL--PAFWVGLLYDEDSLQNVLDMTADW--T 307 (396)
Q Consensus 237 ~~~~g~rp~~~~~~~~lst~~p~vR~----~g~IEiR~~D~~p-~~~~~a~--aAl~~gL~~~~~~~~~~~~~~~~~--~ 307 (396)
||+ ..+|.--+ -+|||+|+||.+| ....+.. +.|+..++......+.. .. ..+ .
T Consensus 266 ------Rpk---------~~~p~~~l~~~Gi~yiEvR~~D~~P~~~~GI~~~~~~fl~lfll~~l~~~~~-~~-~~e~~~ 328 (757)
T 3ln7_A 266 ------RLR---------GAKKAREFLTTGIQYLEFRLFDLNPFEIYGISLKDAKFIHVFALFMIWMDHT-AD-QEEVEL 328 (757)
T ss_dssp ------EEE---------SCSSGGGHHHHCCCEEEECCCCCCTTSTTSSCHHHHHHHHHHHHHHHHSSCC-CC-HHHHHH
T ss_pred ------cCC---------CCCChhhHHhCCCCEEEEEeccCCCCCcccccHHHHHHHHHHHHHHhcCCCC-CC-HHHHHH
Confidence 333 11221111 1479999999999 3444333 33444433221111100 00 111 1
Q ss_pred HHHHHHHhhhhhhcCCCCccCCccHHHHHHHHHHHHHHhhhhcCCchh--chHHHHHHHHH-cCCChHHHHHHHH
Q 016072 308 TGERQMLRNKVPKTGLKTPFRDGLLRHVAQDVLKLSKDGLERRGFKET--GFLNEVAEVVR-TGVTPAEKLLDMY 379 (396)
Q Consensus 308 ~~~~~~~~~~aar~Gl~a~~~~~~~~~~~~~Ll~~a~~~L~~~g~~e~--~~L~~l~~~l~-~g~t~A~~q~~~~ 379 (396)
..+|.+ +++++| +....++++++.++++...+-++.+|...+ ..++.+.+.+. ...|++-+.++..
T Consensus 329 ~~~N~~---~va~~g---p~~~~~~~~~~~~ll~~l~~~a~~l~~~~~y~~~~~~~~~~~~~p~~T~sa~~~~~~ 397 (757)
T 3ln7_A 329 GKARLA---EVAFEH---PLEKTAYAVEGELVLLELLSMLEQIGAEPELFEIVKEKLTQFTDPSKTVAGRLVRAI 397 (757)
T ss_dssp HHHHHH---HHHHSC---TTSCCTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCGGGSHHHHHHHHH
T ss_pred HHHHHH---HHHHhC---CCCeehHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhcChhcCHHHHHHHHH
Confidence 233444 799999 223458899999999999999999987542 22444444444 3478888877654
No 6
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=99.90 E-value=2.5e-23 Score=210.82 Aligned_cols=305 Identities=16% Similarity=0.178 Sum_probs=202.1
Q ss_pred CcceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCC-CCCCC---------CcHHH
Q 016072 35 KQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRY 103 (396)
Q Consensus 35 ~~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~-~~~~~---------p~~RY 103 (396)
...||.|.. +|+|+.|+||.++.++.+.|....+.+...++ .+-.|++.+ .|+.... ++++. .|.+|
T Consensus 65 hp~IttDfsEsqlE~iTp~~~s~~ea~~~L~~l~~~v~~~l~-~~E~LWp~S-mPl~~~~~~ipiA~yg~sn~g~~k~~Y 142 (525)
T 3nzt_A 65 NNSITVDFSENLLELITKPHDSIDKAIGELYQLSAFTLDNMH-SDEIILNTS-MPLSANDNDIQEADFGSSNSGRMKRVY 142 (525)
T ss_dssp CSSEEESSBTTEEEEECCCBSSHHHHHHHHHHHHHHHHHHSC-TTEEECCSS-SCCSCCGGGCCBCCCCSSHHHHHHHHH
T ss_pred CCCCCchhhhhHhhhcCCCCCCHHHHHHHHHHHHHHHHHhhC-CCCeEEeec-CCCCCCcCCCceeeccccccCcchHHH
Confidence 356999996 99999999999999999999999999888864 466788877 6654433 46665 57899
Q ss_pred H-HHHHhccccccchhhhhcccceeEeeeCCCChH--------------HHHHHHHHHhhhHHHHHHHhhCCCCC-----
Q 016072 104 E-IMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEA--------------DMIRKFRAGLALQPIATALFANSPFT----- 163 (396)
Q Consensus 104 ~-~m~~~~~~~g~~g~~~~~~~~s~qVhv~~~~~~--------------~~~~~~n~~~~~~P~l~ALsaNSP~~----- 163 (396)
+ .+.++|+ .+.++ +||+|||+++++.- .-.+++|-...+.|++++||++||++
T Consensus 143 R~gL~~rYG-----~~~q~--IsGiH~Nfsl~~~~~~~l~~~~~~~~s~~Y~~Lirnf~Ry~Wll~YLfGASP~~~~sF~ 215 (525)
T 3nzt_A 143 RKGLSARYG-----KIMQI--ISGIHYNFSFDKDLISNIATNKQVSISDIYFDVLNNYFEFMWLLPYLFGASPICAKTSV 215 (525)
T ss_dssp HHHHHHHHC-----SGGGG--CCBEEEEEECCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTHHHHHHCCBCEEEGGGC
T ss_pred HHHHHHHhc-----hhhee--eeeEEEEecCCHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhhCCcccccccc
Confidence 9 6666653 23444 99999999999641 12256677778999999999999998
Q ss_pred CCCCCCCc-------------cchHHH--HhcCCCCCCCCCCCCCCCchhHHHHHHHHhcCcc-----eeee-ecCcccc
Q 016072 164 EGKPNGYL-------------SMRSHI--WTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPM-----YFVY-RKKKYID 222 (396)
Q Consensus 164 ~G~~tg~~-------------s~R~~i--w~~~~~~r~g~~p~~f~~~~~~~~y~~~l~~~p~-----~~~~-~~g~~i~ 222 (396)
.|++|++. |.|... |.+.+ ++| ++..|+|+.+|.+.++.++++|- |=+. .+|.++.
T Consensus 216 ~g~~~~l~~~~~~t~y~p~atSlR~S~~GY~N~~--q~~-l~i~ynsl~~Yv~~l~~av~tp~~~y~~iG~~d~~g~~~Q 292 (525)
T 3nzt_A 216 KNKPDYLSVLDDKFYVGEYATSLRMSDLGYTSPA--QKD-LAISYDNVKAYVKDLIQATDDTFADYKRIGLYNSQGQRIQ 292 (525)
T ss_dssp SSCCTTCEECSSSEEECTTCSBGGGSSCC--CHH--HHT-CCCCCSCHHHHHHHHHHHHHSBCHHHHHHCSBCTTSCBCC
T ss_pred cCCCCcccccCCccccCCCcceeeccccCCCCCc--ccC-CCCCCCCHHHHHHHHHHHHhCcchhhhhhcccccccchhh
Confidence 89999988 999988 44454 567 46699999888888888887641 1011 1222110
Q ss_pred CCCCcHHHHhhCCCCCCCCCCCChhhhhhhhcCCCCcccccc------------------ceeeccCCCCch-hhhchHH
Q 016072 223 CAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR------------------YLEMRGADGGPW-RRLCALP 283 (396)
Q Consensus 223 ~~~~~~~d~~~~~~~~~~g~rp~~~~~~~~lst~~p~vR~~g------------------~IEiR~~D~~p~-~~~~a~a 283 (396)
-. .-....-+.+|.+||||| |||+|+||..|. ...+...
T Consensus 293 Ln----------------------~g~Lq~enEfYs~IRPK~~~~~ge~P~~aL~~~GI~YIElR~lDlnPf~~~GIs~~ 350 (525)
T 3nzt_A 293 LN----------------------DGILQIENEYYSAIRPKQIAKRGERPACALYNRGVEYVEVRVLDVDPFEPVGISKD 350 (525)
T ss_dssp SC----------------------SBSCSSGGGCCCSEEEECCCCTTSCHHHHHHHHCCCEEEECCCBCCTTSTTSCCHH
T ss_pred hc----------------------cchhhhccceeeccCCCCCCcCCcCchHHHHhcCCCEEEEEeecCCCCcccCcCHH
Confidence 00 000012346788888875 899999999993 4434332
Q ss_pred --HHHHHhhcChhhhhh-hhhcCCCccHHHHHHHhhhhhhcCCCCcc--------CCccHHHHHHHHHHHHHHhhhhcCC
Q 016072 284 --AFWVGLLYDEDSLQN-VLDMTADWTTGERQMLRNKVPKTGLKTPF--------RDGLLRHVAQDVLKLSKDGLERRGF 352 (396)
Q Consensus 284 --Al~~gL~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aar~Gl~a~~--------~~~~~~~~~~~Ll~~a~~~L~~~g~ 352 (396)
.|+..++......+. ...........+|.+ +|+++|.+... ...++++++.++++...+-++.+|
T Consensus 351 ~l~FL~lfLl~~ll~~s~~~~~~e~~~~~~N~~---~Va~~Gr~p~l~L~~~~~g~~~~~~~wa~ell~~l~~~A~~Ld- 426 (525)
T 3nzt_A 351 TALFVEVMLMTCLDKDAKKYHKDIIKQAKQNLT---AVAIQGRNPQLKLKKLDDDSEILLKDYALELFDEIEAVAKKMP- 426 (525)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCHHHHHHHHHHHH---HHHHHTTCTTCEEECTTTCCEEEHHHHHHHHHHHHHHHHTTSC-
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH---HHHHhccCcCCeeecCCCCcEehHHHHHHHHHHHHHHHHHHHC-
Confidence 234333221111110 000000111235655 79999987421 123789999999999999999998
Q ss_pred chhchHHHHH---HHHH-cCCChHHHHHHHH
Q 016072 353 KETGFLNEVA---EVVR-TGVTPAEKLLDMY 379 (396)
Q Consensus 353 ~e~~~L~~l~---~~l~-~g~t~A~~q~~~~ 379 (396)
. .|...|. +.+. ...|++-+.++..
T Consensus 427 ~--~y~~~l~~~~~~~~~P~lT~Sarll~~~ 455 (525)
T 3nzt_A 427 K--EYLDAVEIQKRKVLDISQTPSAKIIELA 455 (525)
T ss_dssp H--HHHHHHHHHHHHHHCGGGSHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHhhChhcCHHHHHHHHH
Confidence 3 2444443 4343 4578888876653
No 7
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=99.57 E-value=2.7e-13 Score=138.65 Aligned_cols=147 Identities=16% Similarity=0.129 Sum_probs=117.9
Q ss_pred cceeeccC-ceEEeecCccc----CHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEeccCCCCCCCC---C
Q 016072 36 QSISLEPG-GQFELSGAPLE----TLHQTCAEVNSHLYQVKAVAEEM-------------GIGFLGIGFQPKWGLK---D 94 (396)
Q Consensus 36 ~~i~~Ep~-~qiE~~t~p~~----~~~~l~~~l~~~l~~l~~~a~~~-------------g~~l~~~G~~P~~~~~---~ 94 (396)
..+..|.| -+||. |++.+ ....++..+...+..++..+++. |..+++.|+-|..... .
T Consensus 91 p~~~PEyGryMlE~-TP~~Py~g~~~~~VE~nMr~RR~~a~~~l~~~~~~~~~~~~~~~~~~~~ltit~FPrLG~~dFt~ 169 (692)
T 3ig5_A 91 VSFHPEYGRYMLEA-TPASPYLNYVGSYVEVNMQKRRAIAEYKLSEYARQDSKNNLHVGSRSVPLTLTVFPRMGCPDFIN 169 (692)
T ss_dssp EEEECCSBTTEEEE-EESSCEESCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTEEEEEECCSSCTTTTSTTCBS
T ss_pred Ccccchhhceeecc-CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhhcccccccccccCCeeEEEeeccccCCCCCCCC
Confidence 67899998 89999 77765 23488899999999999999886 8899999988876421 1
Q ss_pred -------------------CCCCCcHHHHHHHHhccc-cc----------------------------------------
Q 016072 95 -------------------IPVMPKGRYEIMRNYMPK-VG---------------------------------------- 114 (396)
Q Consensus 95 -------------------~~~~p~~RY~~m~~~~~~-~g---------------------------------------- 114 (396)
..+++.+||..|.+-... .|
T Consensus 170 p~~~~~~~~~~s~Slf~PDe~In~HpRF~tLT~NIR~RRG~KV~InIPif~D~nTp~~d~ti~~~~~f~~~~~~~~~aa~ 249 (692)
T 3ig5_A 170 IKDPWNHKNAASRSLFLPDEVINRHVRFPNLTASIRTRRGEKVCMNVPMYKDIATPETDDSIYDRDWFLPEDKEAKLASK 249 (692)
T ss_dssp SSCTTSSCCTTTCCSSCCGGGBCSSTHHHHHHHHHHHHHSSCCCEEEEBCCCTTCCSSCTTCCCCCSSTTGGGTHHHHCC
T ss_pred CCCCCCCCCcccccccCCHhhcCCCcchHHHHHHHHHhcCCCceEeeccccCCCCCCCCcccchhhhCCccccccccccC
Confidence 346889999999864331 11
Q ss_pred -------cchhhhhcccceeEeeeCCCChHHHHHHHHHHhhhHHHHHHHhhCCCCCCCCCCCCccchHHHHhcCCCCCC
Q 016072 115 -------SLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA 186 (396)
Q Consensus 115 -------~~g~~~~~~~~s~qVhv~~~~~~~~~~~~n~~~~~~P~l~ALsaNSP~~~G~~tg~~s~R~~iw~~~~~~r~ 186 (396)
.+|..|- +|++|||+++++.+++...|+.+..+.|+++|||||||||-|.. .+..+|..+.++..++|+
T Consensus 250 p~~IyMDaMgFGMG--ccCLQvTfQa~ni~eAR~lYDqL~~l~PimLALSAASP~~kG~l-ad~DtRW~vIs~sVDdRt 325 (692)
T 3ig5_A 250 PGFIYMDSMGFGMG--CSCLQVTFQAPNINKARYLYDALVNFAPIMLAFSAAAPAFKGWL-ADQDVRWNVISGAVDDRT 325 (692)
T ss_dssp TTEEEECSTHHHHT--SCBEEEEEEESSHHHHHHHHHHHTTHHHHHHHHTCCCCEETTEE-BSBCCSHHHHHHHTCCCC
T ss_pred CCeeEecccccccc--ccceeeeeccCCHHHHHHHHHhhhhhHHHHHHHhhcChhhccee-cccchhHHHHHhhccCCC
Confidence 0122222 67899999999999999999999999999999999999999984 688899999988866665
No 8
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=93.04 E-value=0.29 Score=47.67 Aligned_cols=45 Identities=27% Similarity=0.261 Sum_probs=38.8
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
.+..|-| +|.||+..++. .-++++.+..+...++++|+++|+...
T Consensus 189 ~~h~E~~pGQ~Ei~~~~~~-~l~aAD~~~~~K~~vk~vA~~~G~~AT 234 (370)
T 3fky_A 189 GINAEVMPSQWEFQVGPCT-GIDMGDQLWMARYFLHRVAEEFGIKIS 234 (370)
T ss_dssp EEEECSSTTEEEEEEEEEE-THHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred eeecCcCCCceEEecCCCC-HHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 3567887 99999999985 567889999999999999999998763
No 9
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=92.95 E-value=0.16 Score=49.28 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=38.0
Q ss_pred cceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 016072 36 QSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 81 (396)
Q Consensus 36 ~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l 81 (396)
..+..|-| +|.||+..++ +.-++.+.+..+...++++|+++|+..
T Consensus 187 e~~h~E~~pgQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~a 232 (356)
T 2d3a_A 187 SGINGEVMPGQWEFQVGPS-VGISSGDQVWVARYILERITEIAGVVV 232 (356)
T ss_dssp EEEEECSSTTEEEEEEEEE-ETHHHHHHHHHHHHHHHHHHHHHTEEE
T ss_pred EEeecCcCCCceEEecCCC-CHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 34667887 8999999994 555688999999999999999999765
No 10
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=92.02 E-value=0.58 Score=47.05 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=64.0
Q ss_pred eeeccC-c-eEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccccc
Q 016072 38 ISLEPG-G-QFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 115 (396)
Q Consensus 38 i~~Ep~-~-qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 115 (396)
+..|-| + |.||+..+ .+.-.+++.+..+...++.+|++||+... .+|..-.
T Consensus 209 ~h~E~apggQ~Ei~~~~-~~~l~aAD~~~~~k~~vk~vA~~hGl~at---FmpKP~~----------------------- 261 (468)
T 1f52_A 209 HHHEVATAGQNEVATRF-NTMTKKADEIQIYKYVVHNVAHRFGKTAT---FMPKPMF----------------------- 261 (468)
T ss_dssp EEECSSTTTEEEEEECC-EEHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST-----------------------
T ss_pred eecCCCCceeEEEeccC-CCHHHHHHHHHHHHHHHHHHHHHhCCEEE---EeCCCCC-----------------------
Confidence 457776 5 99999998 57888999999999999999999998764 3554211
Q ss_pred chhhhhcccceeEeeeCCCC--------------hHHHHHHHHHHhhhHHHHHHHhh
Q 016072 116 LGLDMMFRTCTVQVNLDFSS--------------EADMIRKFRAGLALQPIATALFA 158 (396)
Q Consensus 116 ~g~~~~~~~~s~qVhv~~~~--------------~~~~~~~~n~~~~~~P~l~ALsa 158 (396)
| .+++|+|+|+.+-+ -+.+...+..+...+|.+.|+++
T Consensus 262 -g----~~GSG~H~h~Sl~~~g~Nlf~~~~~~~ls~~~~~~iaGll~h~~~l~a~~a 313 (468)
T 1f52_A 262 -G----DNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALAN 313 (468)
T ss_dssp -T----SCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHS
T ss_pred -C----CCCCCcceeeccccCCCcccCCCCcchHHHHHHHHHHHHHHHHHHhHhHhc
Confidence 1 12556666654321 13466677777888999999965
No 11
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=91.10 E-value=0.64 Score=46.35 Aligned_cols=93 Identities=22% Similarity=0.111 Sum_probs=64.4
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccccc
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 115 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 115 (396)
.+..|-| +|.||+..++ +.-++++.+..+...++.+|+++|+...- +|..- .
T Consensus 176 ~~h~E~~pgQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aTF---mpKP~------~----------------- 228 (443)
T 4hpp_A 176 MFLPEYGQRQYEVTCRPA-QGVAAADRAVNVREVTREVARQMGLRTCF---APLPA------P----------------- 228 (443)
T ss_dssp EEEECSSTTEEEEEECCE-ETHHHHHHHHHHHHHHHHHHHHHTCEEEC---SSSSS------T-----------------
T ss_pred EeecCCCCCceEEEecCC-cHHHHHHHHHHHHHHHHHHHHHhCCEEEE---ecccC------C-----------------
Confidence 3666887 9999999996 56678899999999999999999987642 34321 0
Q ss_pred chhhhhcccceeEeeeCCCCh----------------HHHHHHHHHHhhhHHHHHHHhhCCC
Q 016072 116 LGLDMMFRTCTVQVNLDFSSE----------------ADMIRKFRAGLALQPIATALFANSP 161 (396)
Q Consensus 116 ~g~~~~~~~~s~qVhv~~~~~----------------~~~~~~~n~~~~~~P~l~ALsaNSP 161 (396)
+ ..++|+|+|+.+-+. +.+...+-.+...+|.+.|+++-++
T Consensus 229 -~----~~GsG~H~h~Sl~~~~G~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~ 285 (443)
T 4hpp_A 229 -G----AVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTA 285 (443)
T ss_dssp -T----CCCCCEEEEEEEEETTSCBSSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSG
T ss_pred -C----CCcccceeeeeeecCCCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 1 125566666653210 2345566667778899999987554
No 12
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=89.69 E-value=1.1 Score=43.69 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=38.4
Q ss_pred cceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 36 QSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 36 ~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
..+..|-| +|.||+..++..+. +.+.+..+...++++|+++|+...
T Consensus 210 e~~h~E~~pgQ~Ei~~~~~~~l~-aAD~~~~~k~~vk~vA~~~Gl~aT 256 (384)
T 2ojw_A 210 AGTNAEVMPAQWEFQIGPCEGIS-MGDHLWVARFILHRVCEDFGVIAT 256 (384)
T ss_dssp EEEEECSSTTEEEEEEEEEETTH-HHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EeeecCCCCcceEEEcCCCcHHH-HHHHHHHHHHHHHHHHHHhCCEEE
Confidence 34667877 89999999966554 689999999999999999998763
No 13
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=89.65 E-value=1.5 Score=44.07 Aligned_cols=90 Identities=20% Similarity=0.101 Sum_probs=63.2
Q ss_pred ceeeccC--ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhccccc
Q 016072 37 SISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 114 (396)
Q Consensus 37 ~i~~Ep~--~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g 114 (396)
.+..|-| +|.||+..+. +.-++++.+..+...++.+|+++|+... .+|..-.
T Consensus 211 ~~h~E~~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~---------------------- 264 (473)
T 3ng0_A 211 KHHHEVASGGQNELGIKFD-KLVNSADNLMIYKYVIKNVAKKYGKTVT---FMPKPIF---------------------- 264 (473)
T ss_dssp EEEECSSTTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST----------------------
T ss_pred EeecCcCCCCceEEEccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCcccC----------------------
Confidence 3567887 8999999995 5778999999999999999999998764 2443210
Q ss_pred cchhhhhcccceeEeeeCCC-C-------------hHHHHHHHHHHhhhHHHHHHHhh
Q 016072 115 SLGLDMMFRTCTVQVNLDFS-S-------------EADMIRKFRAGLALQPIATALFA 158 (396)
Q Consensus 115 ~~g~~~~~~~~s~qVhv~~~-~-------------~~~~~~~~n~~~~~~P~l~ALsa 158 (396)
+. .++|+|+|+.+. + -+.+...+-.+...+|.+.|+++
T Consensus 265 --~~----~GSG~H~H~Sl~~~g~n~F~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~ 316 (473)
T 3ng0_A 265 --ND----NGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTN 316 (473)
T ss_dssp --TS----CCCCEEEEEEEEETTEETTBSSSGGGBCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --CC----CCCeeEEEEeeccCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 11 145555555431 1 03455666677788899999874
No 14
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=89.48 E-value=1.7 Score=43.23 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=38.5
Q ss_pred eeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 38 ISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 38 i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
+..|-| +|.||+..++ +.-++++.+..+...++.+|+++|+...
T Consensus 186 ~h~E~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT 230 (444)
T 3qaj_A 186 SHHEVAPGQHEIDFKYA-GAVRSCDDIQTFKLVVKTIARKHGLHAT 230 (444)
T ss_dssp EEECSSTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred eEcCcCCCcEEEecCCC-hHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 667887 9999999996 6778999999999999999999997653
No 15
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=85.37 E-value=3.6 Score=41.44 Aligned_cols=90 Identities=18% Similarity=0.064 Sum_probs=62.1
Q ss_pred eeeccC--ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEeccCCCCCCCCCCCCCCcHHHHHHHHhcccccc
Q 016072 38 ISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 115 (396)
Q Consensus 38 i~~Ep~--~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 115 (396)
+..|-| +|.||+..++ +.-++++.+..+...++++|+++|+...- .|..- .
T Consensus 224 ~h~E~gp~GQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aTF---mpKP~------~----------------- 276 (486)
T 4acf_A 224 GHHEVGSGGQAEINYQFN-SLLHAADDMQLYKYIIKNTAWQNGKTVTF---MPKPL------F----------------- 276 (486)
T ss_dssp EEECSSTTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTCEEEC---CSCSS------T-----------------
T ss_pred eeeeeeccceeEEeccCc-chhhhhhHHHHHHHHHHHHHHHcCCeEEE---eeccc------c-----------------
Confidence 456754 7999999986 57788999999999999999999987642 33321 0
Q ss_pred chhhhhcccceeEeeeCCCC---------------hHHHHHHHHHHhhhHHHHHHHhhC
Q 016072 116 LGLDMMFRTCTVQVNLDFSS---------------EADMIRKFRAGLALQPIATALFAN 159 (396)
Q Consensus 116 ~g~~~~~~~~s~qVhv~~~~---------------~~~~~~~~n~~~~~~P~l~ALsaN 159 (396)
+ ..++|+|+|+.+-+ -+.+-..+..+...+|.+.|+++-
T Consensus 277 -~----~~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P 330 (486)
T 4acf_A 277 -G----DNGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNP 330 (486)
T ss_dssp -T----SCCCCEEEEEEEEETTEESSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred -C----CCcccceeeeeeccCCCccccccccccccchHHHHHHHHHHHhhhcceeeecC
Confidence 1 12556666665421 124455666677788888888753
No 16
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=80.42 E-value=2.9 Score=43.85 Aligned_cols=45 Identities=18% Similarity=0.095 Sum_probs=38.5
Q ss_pred ceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 37 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 37 ~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
.+..|-| +|.||+..+. +.-.+++.+..+...++.+|.++|+...
T Consensus 282 ~~H~EvaPGQ~EI~~~~~-~al~AAD~~~l~K~vvK~VA~~hGl~AT 327 (729)
T 3o6x_A 282 TRHNEVAPNQFELAPIFE-NCNLANDHNQLVMDLMKRIARKHHFAVL 327 (729)
T ss_dssp EECBCSSTTEECCEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EeecCCCCCceEeccCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3456777 8999999996 5778899999999999999999998764
No 17
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=37.60 E-value=8 Score=38.10 Aligned_cols=47 Identities=11% Similarity=-0.041 Sum_probs=39.9
Q ss_pred cceeeccC-ceEEeecCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 016072 36 QSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 82 (396)
Q Consensus 36 ~~i~~Ep~-~qiE~~t~p~~~~~~l~~~l~~~l~~l~~~a~~~g~~l~ 82 (396)
..+..|-+ +|.||+..++.+.-++++.+..+...++.+|+++|+...
T Consensus 169 e~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~at 216 (421)
T 2j9i_A 169 GAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIAS 216 (421)
T ss_dssp BTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEE
T ss_pred EEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 45667777 899999999774677889999999999999999998764
No 18
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=35.56 E-value=9.2 Score=21.40 Aligned_cols=15 Identities=20% Similarity=0.213 Sum_probs=12.1
Q ss_pred hhcCCCCccccccce
Q 016072 252 HLTTIFPEVRLKRYL 266 (396)
Q Consensus 252 ~lst~~p~vR~~g~I 266 (396)
..|.+|-|||+.|++
T Consensus 8 frsslflwvr~ng~~ 22 (26)
T 2bp3_S 8 FRSSLFLWVRPNGRV 22 (26)
T ss_pred hhheEEEEEccCCee
Confidence 567889999999864
Done!