Query 016073
Match_columns 396
No_of_seqs 227 out of 2181
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 03:32:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016073.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016073hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2737 Putative metallopeptid 100.0 1E-68 2.2E-73 490.7 29.2 390 1-395 1-392 (492)
2 PRK10879 proline aminopeptidas 100.0 4E-66 8.7E-71 513.4 40.9 366 12-395 1-376 (438)
3 KOG2414 Putative Xaa-Pro amino 100.0 2E-59 4.4E-64 433.9 27.7 363 4-394 54-427 (488)
4 PRK13607 proline dipeptidase; 100.0 3.8E-57 8.3E-62 448.0 37.9 343 14-384 5-352 (443)
5 COG0006 PepP Xaa-Pro aminopept 100.0 3.3E-52 7.1E-57 409.8 31.6 328 10-395 3-341 (384)
6 TIGR02993 ectoine_eutD ectoine 100.0 2.6E-51 5.6E-56 403.3 32.0 328 10-395 4-349 (391)
7 PRK09795 aminopeptidase; Provi 100.0 4.7E-51 1E-55 398.3 30.0 306 19-395 2-316 (361)
8 PRK14575 putative peptidase; P 100.0 7.6E-47 1.7E-51 372.8 33.8 318 20-395 12-363 (406)
9 PRK14576 putative endopeptidas 100.0 3.4E-46 7.4E-51 368.1 34.5 318 20-395 12-362 (405)
10 PRK15173 peptidase; Provisiona 100.0 7.1E-41 1.5E-45 320.6 27.2 234 128-395 43-280 (323)
11 PRK12897 methionine aminopepti 100.0 7.1E-40 1.5E-44 303.4 22.0 185 186-395 3-196 (248)
12 PRK07281 methionine aminopepti 100.0 3.4E-39 7.3E-44 302.2 21.5 186 185-395 2-227 (286)
13 cd01087 Prolidase Prolidase. E 100.0 1.5E-38 3.2E-43 294.1 23.3 197 193-395 1-199 (243)
14 PRK12318 methionine aminopepti 100.0 1.4E-38 2.9E-43 299.8 21.4 192 179-395 34-236 (291)
15 TIGR00500 met_pdase_I methioni 100.0 8.1E-38 1.8E-42 289.8 22.4 185 186-395 2-195 (247)
16 cd01090 Creatinase Creatine am 100.0 4.2E-37 9.1E-42 280.8 21.1 179 193-395 1-190 (228)
17 PRK05716 methionine aminopepti 100.0 2.5E-36 5.4E-41 280.8 22.2 186 185-395 3-197 (252)
18 PRK12896 methionine aminopepti 100.0 2.5E-36 5.5E-41 281.2 21.3 187 184-395 7-203 (255)
19 cd01092 APP-like Similar to Pr 100.0 7.3E-36 1.6E-40 269.6 21.4 179 193-395 1-179 (208)
20 PLN03158 methionine aminopepti 100.0 1.1E-35 2.4E-40 288.7 21.6 191 181-395 131-329 (396)
21 cd01091 CDC68-like Related to 100.0 1.3E-34 2.8E-39 266.1 18.8 180 193-395 1-198 (243)
22 PF00557 Peptidase_M24: Metall 100.0 1.1E-34 2.4E-39 261.7 17.8 178 194-395 1-180 (207)
23 cd01086 MetAP1 Methionine Amin 100.0 2.8E-33 6.2E-38 258.0 21.2 178 193-395 1-187 (238)
24 cd01085 APP X-Prolyl Aminopept 100.0 3.6E-33 7.8E-38 253.8 20.7 176 194-395 5-190 (224)
25 cd01066 APP_MetAP A family inc 100.0 4.6E-32 9.9E-37 243.7 21.0 178 193-395 1-178 (207)
26 PTZ00053 methionine aminopepti 100.0 1.8E-30 3.9E-35 254.2 22.0 187 185-395 150-351 (470)
27 cd01089 PA2G4-like Related to 100.0 1.1E-29 2.3E-34 232.4 20.2 169 193-381 1-183 (228)
28 TIGR00501 met_pdase_II methion 100.0 3.1E-29 6.8E-34 236.9 20.8 178 190-395 2-183 (295)
29 PRK08671 methionine aminopepti 100.0 5.9E-29 1.3E-33 234.9 21.7 176 192-395 1-180 (291)
30 TIGR00495 crvDNA_42K 42K curve 100.0 6.3E-28 1.4E-32 235.0 22.3 176 185-382 11-201 (389)
31 cd01088 MetAP2 Methionine Amin 100.0 4.7E-28 1E-32 228.7 20.1 175 193-395 1-179 (291)
32 KOG1189 Global transcriptional 100.0 1.4E-27 3E-32 235.8 16.9 305 58-395 9-336 (960)
33 COG0024 Map Methionine aminope 99.9 5.6E-26 1.2E-30 205.9 21.3 184 187-395 5-199 (255)
34 KOG2738 Putative methionine am 99.9 2.7E-24 5.8E-29 192.7 17.7 175 185-384 114-293 (369)
35 KOG2413 Xaa-Pro aminopeptidase 99.9 8.8E-24 1.9E-28 206.6 20.2 183 178-382 298-490 (606)
36 COG5406 Nucleosome binding fac 99.9 3E-23 6.5E-28 201.5 18.5 341 10-394 4-376 (1001)
37 PF05195 AMP_N: Aminopeptidase 99.8 5.2E-21 1.1E-25 159.6 7.6 124 12-147 1-125 (134)
38 KOG2776 Metallopeptidase [Gene 99.4 5.3E-12 1.1E-16 117.0 15.1 152 186-340 14-179 (398)
39 KOG2775 Metallopeptidase [Gene 99.3 3.5E-11 7.6E-16 108.8 14.4 191 188-395 80-278 (397)
40 PF01321 Creatinase_N: Creatin 98.8 3.7E-09 8E-14 87.7 4.3 123 20-187 1-132 (132)
41 PF14826 FACT-Spt16_Nlob: FACT 98.2 1.3E-06 2.9E-11 75.1 4.8 79 12-99 1-80 (163)
42 cd01066 APP_MetAP A family inc 93.3 1.4 3E-05 38.7 11.5 99 194-295 102-202 (207)
43 KOG2738 Putative methionine am 93.3 0.21 4.4E-06 46.4 6.1 59 302-372 124-182 (369)
44 PRK05716 methionine aminopepti 90.8 3.2 6.9E-05 38.2 11.1 95 196-295 120-238 (252)
45 TIGR00500 met_pdase_I methioni 90.6 3.6 7.9E-05 37.7 11.3 95 196-295 118-236 (247)
46 PRK08671 methionine aminopepti 90.2 5.7 0.00012 37.6 12.5 97 196-295 103-204 (291)
47 cd01092 APP-like Similar to Pr 89.8 6.1 0.00013 34.9 11.8 96 195-295 104-203 (208)
48 PRK12897 methionine aminopepti 88.9 3.8 8.3E-05 37.7 10.0 96 196-295 119-237 (248)
49 COG0024 Map Methionine aminope 88.6 1.5 3.3E-05 40.4 7.0 39 302-340 13-51 (255)
50 PLN03158 methionine aminopepti 88.5 1.8 3.9E-05 42.8 7.9 56 284-340 126-183 (396)
51 PRK12896 methionine aminopepti 87.9 8.7 0.00019 35.3 11.7 94 196-295 125-244 (255)
52 cd01091 CDC68-like Related to 87.6 7.5 0.00016 35.8 10.9 97 195-295 120-232 (243)
53 cd01088 MetAP2 Methionine Amin 87.3 9.4 0.0002 36.1 11.7 97 196-295 102-203 (291)
54 cd01086 MetAP1 Methionine Amin 87.2 9.4 0.0002 34.7 11.4 83 196-282 110-197 (238)
55 PRK12318 methionine aminopepti 86.8 7.6 0.00016 36.8 10.7 81 195-282 159-246 (291)
56 PF00557 Peptidase_M24: Metall 86.6 12 0.00026 33.1 11.5 96 196-295 104-205 (207)
57 TIGR00501 met_pdase_II methion 86.0 5.3 0.00011 37.9 9.3 97 196-295 106-207 (295)
58 KOG2775 Metallopeptidase [Gene 85.4 4.2 9.1E-05 38.0 7.8 73 302-394 87-164 (397)
59 TIGR02993 ectoine_eutD ectoine 85.2 9.5 0.00021 37.7 11.0 98 195-295 271-372 (391)
60 cd01089 PA2G4-like Related to 83.5 12 0.00026 33.8 10.2 91 195-295 121-218 (228)
61 PTZ00053 methionine aminopepti 82.7 11 0.00023 38.3 10.0 97 195-295 264-375 (470)
62 cd01090 Creatinase Creatine am 82.1 21 0.00044 32.4 11.1 96 196-295 111-218 (228)
63 PRK09795 aminopeptidase; Provi 81.2 24 0.00052 34.4 12.0 103 190-295 236-340 (361)
64 PRK07281 methionine aminopepti 80.7 19 0.00041 34.0 10.6 81 196-282 150-237 (286)
65 TIGR00495 crvDNA_42K 42K curve 79.6 19 0.00041 35.7 10.6 98 196-295 140-248 (389)
66 cd01087 Prolidase Prolidase. E 77.7 29 0.00063 31.6 10.7 100 195-295 104-233 (243)
67 PRK14575 putative peptidase; P 76.5 26 0.00057 34.8 10.7 98 195-295 286-387 (406)
68 COG0006 PepP Xaa-Pro aminopept 75.5 32 0.00068 33.9 11.0 97 196-295 264-365 (384)
69 PRK14576 putative endopeptidas 75.0 38 0.00081 33.7 11.4 98 195-295 285-386 (405)
70 PRK15173 peptidase; Provisiona 74.2 41 0.00088 32.3 11.1 99 195-295 203-304 (323)
71 smart00235 ZnMc Zinc-dependent 48.4 6 0.00013 32.7 0.1 17 365-382 90-106 (140)
72 PRK10879 proline aminopeptidas 46.7 2.4E+02 0.0053 28.3 11.3 100 196-295 284-409 (438)
73 cd04278 ZnMc_MMP Zinc-dependen 45.4 7.7 0.00017 32.9 0.3 15 364-379 110-124 (157)
74 cd00203 ZnMc Zinc-dependent me 44.9 5.7 0.00012 33.8 -0.6 17 364-381 99-115 (167)
75 PF00413 Peptidase_M10: Matrix 38.2 5.6 0.00012 33.3 -1.7 15 364-379 108-122 (154)
76 PF05184 SapB_1: Saposin-like 37.5 96 0.0021 19.0 4.5 32 200-231 4-35 (39)
77 cd01085 APP X-Prolyl Aminopept 35.8 1.6E+02 0.0034 26.6 7.3 40 301-340 4-45 (224)
78 cd04279 ZnMc_MMP_like_1 Zinc-d 35.0 14 0.0003 31.3 0.2 18 364-381 107-124 (156)
79 cd04271 ZnMc_ADAM_fungal Zinc- 33.7 17 0.00036 33.1 0.5 16 364-380 148-163 (228)
80 cd04277 ZnMc_serralysin_like Z 30.0 12 0.00025 32.8 -1.1 13 364-376 116-128 (186)
81 cd04269 ZnMc_adamalysin_II_lik 29.9 17 0.00038 31.8 0.0 17 364-381 134-150 (194)
82 KOG1189 Global transcriptional 29.5 2.8E+02 0.006 29.9 8.4 95 195-295 258-366 (960)
83 KOG2413 Xaa-Pro aminopeptidase 28.9 81 0.0017 32.7 4.4 62 20-97 11-74 (606)
84 cd04327 ZnMc_MMP_like_3 Zinc-d 28.4 15 0.00033 32.5 -0.7 17 365-382 96-112 (198)
85 cd04268 ZnMc_MMP_like Zinc-dep 28.1 15 0.00033 31.1 -0.7 15 364-378 97-111 (165)
86 PF09851 SHOCT: Short C-termin 26.4 55 0.0012 19.5 1.8 16 10-25 15-30 (31)
87 cd04273 ZnMc_ADAMTS_like Zinc- 26.3 29 0.00063 30.9 0.8 16 364-380 143-158 (207)
88 cd04270 ZnMc_TACE_like Zinc-de 25.7 22 0.00048 32.7 -0.1 17 364-381 170-186 (244)
89 PF07305 DUF1454: Protein of u 25.2 3.8E+02 0.0083 23.6 7.2 53 300-370 114-166 (200)
90 PF11350 DUF3152: Protein of u 24.8 34 0.00073 30.4 0.8 25 364-390 142-166 (203)
91 COG5406 Nucleosome binding fac 24.4 2.6E+02 0.0056 29.5 7.0 73 202-279 306-384 (1001)
92 PHA02447 hypothetical protein 21.3 44 0.00096 23.7 0.7 32 64-95 6-37 (86)
93 PF05572 Peptidase_M43: Pregna 20.8 18 0.00038 30.8 -1.6 14 364-377 72-85 (154)
No 1
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=1e-68 Score=490.65 Aligned_cols=390 Identities=66% Similarity=1.110 Sum_probs=355.4
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhhhhhccC--CCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCC
Q 016073 1 MASSSSLSPPKVPKELYFINREKVLNSLRQHLTET--SRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG 78 (396)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~ 78 (396)
|++.++++.-.+|.+.|..+|+|+.++++...... +++..+++++.|+++.+++.+|..+.|||++.|+||+|.+.|+
T Consensus 1 ms~~~~~~~~~vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~ 80 (492)
T KOG2737|consen 1 MSALSGPSFWLVPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPG 80 (492)
T ss_pred CccccCCccceecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCcc
Confidence 67778888888999999999999999998754322 2434469999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeEEEEecCCCCCcccccccCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCC
Q 016073 79 FYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNF 158 (396)
Q Consensus 79 ~~lvi~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~ 158 (396)
++.+|....|+.+||+|+++.+.+.|.|.+.+..++.+.+.+|++.+.|++..++... +.+.++...+..+|++..
T Consensus 81 ~yg~idv~tgKstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~----~~k~l~~l~g~nTDsg~v 156 (492)
T KOG2737|consen 81 FYGAIDVGTGKSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS----KPKLLYLLRGLNTDSGNV 156 (492)
T ss_pred ceEEEEecCCceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc----CccceeeeeccccCcccc
Confidence 9999988889999999999999999999999999999999999999999998888554 567788888888888876
Q ss_pred CchhhhhccccccccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC
Q 016073 159 SKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR 238 (396)
Q Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~ 238 (396)
+....|.....+..+..-+-+.+.+.|.|||+.||+.||.|++|+++++.++|++++||+.|.++++.++......+||+
T Consensus 157 ~~e~~f~g~~kf~~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcR 236 (492)
T KOG2737|consen 157 LKEASFAGISKFETDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCR 236 (492)
T ss_pred cCcccccchhhcccCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCcc
Confidence 66666666655544555567899999999999999999999999999999999999999999999999999998889999
Q ss_pred CCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHH
Q 016073 239 HCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVI 318 (396)
Q Consensus 239 ~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~ 318 (396)
..+|.+|++||+|++++||.+.+.|+++.++.||+.++|+|+.|++|.||||++|+.+|++|++|+.+|++|++++.+++
T Consensus 237 h~sYtcIc~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm 316 (492)
T KOG2737|consen 237 HLSYTCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVM 316 (492)
T ss_pred ccccceeeecCCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCCCCccccCCCC
Q 016073 319 NAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 319 ~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~~~~ 395 (396)
+++|||+.|.|+|..+.+++-+.|++.|++++++++|++++++..|+||++||.|||+|||++.+++|. ..+.+||
T Consensus 317 ~a~KpGv~W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~-~rp~~P~ 392 (492)
T KOG2737|consen 317 EAMKPGVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGV-ERPDEPG 392 (492)
T ss_pred HhcCCCCccccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCC-CCCCcch
Confidence 999999999999999999999999999999999999999999999999999999999999999999743 3444554
No 2
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=4e-66 Score=513.37 Aligned_cols=366 Identities=31% Similarity=0.469 Sum_probs=315.0
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCCEEEEEEecC---C
Q 016073 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIAT---G 88 (396)
Q Consensus 12 ~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~~~lvi~~~~---g 88 (396)
++..+|++||++|.++|.+ ++++|+.+++..+++ .|+.|||||++||+||||+++|++++++.+.. .
T Consensus 1 ~~~~~~~~rR~~l~~~~~~---------~~~~v~~~~~~~~~~-~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~ 70 (438)
T PRK10879 1 MTQQEFQRRRQALLAKMQP---------GSAALIFAAPEATRS-ADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHN 70 (438)
T ss_pred CChHHHHHHHHHHHhhCCC---------CcEEEEeCCCccccC-CCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCC
Confidence 4678999999999999976 378899999998885 79999999999999999999999988775532 2
Q ss_pred eEEEEecCCCCCcccccccCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhccc
Q 016073 89 KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGME 168 (396)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~ 168 (396)
+.+||+|+.+...+.|.|.+.+.+++.+.+|++.+.+.+++.+.|.+++. +...++...+..... ..........+.
T Consensus 71 ~~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (438)
T PRK10879 71 HSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLN--GLDVVYHAQGEYAYA-DEIVFSALEKLR 147 (438)
T ss_pred eEEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhc--CCceEEecCCccccc-hhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999988764 334565543321110 001111111111
Q ss_pred c-----c--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 016073 169 K-----F--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCS 241 (396)
Q Consensus 169 ~-----~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~ 241 (396)
. . ..+++++.+++.++|+|||++||++||+|++++..++..+++.++||+||.||++.+...+.++ |+...+
T Consensus 148 ~~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~-G~~~~~ 226 (438)
T PRK10879 148 KGSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRH-GARYPS 226 (438)
T ss_pred hhhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC-CCCCCC
Confidence 1 0 2356789999999999999999999999999999999999999999999999999998888774 777789
Q ss_pred CcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 016073 242 YTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM 321 (396)
Q Consensus 242 ~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~ 321 (396)
|+++|++|.|++.+||.+ ++++|++||+|++|+|+.|+||++|+||||+++|+||++|+++|++++++++++++++
T Consensus 227 ~~~iv~~G~na~~~H~~~----~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~ 302 (438)
T PRK10879 227 YNTIVGSGENGCILHYTE----NESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLY 302 (438)
T ss_pred CCcEEEEcCccccccCCC----CccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999865 8899999999999999999999999999999989999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCCCCccccCCCC
Q 016073 322 KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 322 kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~~~~ 395 (396)
|||+++++|+.++++++.+.|.++|++++++++.++......||+|++||+|||++||.|.+..++..+|++.|
T Consensus 303 kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~~~~~~~L~~Gm 376 (438)
T PRK10879 303 RPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGM 376 (438)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcCCCCCCcCCCCC
Confidence 99999999999999999999999999999988877654334699999999999999999998878888888765
No 3
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-59 Score=433.91 Aligned_cols=363 Identities=24% Similarity=0.345 Sum_probs=306.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCCEEEEE
Q 016073 4 SSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI 83 (396)
Q Consensus 4 ~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~~~lvi 83 (396)
-+||.+|.++..||+.||.||.+.+++ ++++|+.+.+ ...++++.+|+|+|++||+||||+.+|+.++++
T Consensus 54 ~pgEltPgis~~Ey~~RR~rl~~ll~~---------~a~~il~sap-~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l 123 (488)
T KOG2414|consen 54 QPGELTPGISATEYKERRSRLMSLLPA---------NAMVILGSAP-VKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLL 123 (488)
T ss_pred CCCCcCCCccHHHHHHHHHHHHHhCCc---------ccEEEEccCc-hhhhcCccceeeecCCCeEEEeccCCCCeeEEE
Confidence 379999999999999999999999987 3777776654 555689999999999999999999999998888
Q ss_pred EecCC---eEEEEecCCCCCcccccccCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCc
Q 016073 84 DIATG---KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSK 160 (396)
Q Consensus 84 ~~~~g---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~ 160 (396)
...+. ...+|+|..+...+.|+|.+....-+.+.+++++..+.+.+..+|.+.... ...++.+ ....+ .
T Consensus 124 ~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~--~~~i~~d-~~ss~-----a 195 (488)
T KOG2414|consen 124 LKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSAL--LYKIWQD-KASSK-----A 195 (488)
T ss_pred eecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhh--hhhhhhh-hccch-----h
Confidence 64332 357999999999999999888766677888888888888888888876421 1222211 00000 0
Q ss_pred hhhhhc---ccc---ccccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc
Q 016073 161 PAQFEG---MEK---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY 234 (396)
Q Consensus 161 ~~~~~~---l~~---~~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~ 234 (396)
...+.. +.. ...++..++.++.++|.|||+.|+++||+|+.|+++++...+-.-|++..|..+.+.++.+++.+
T Consensus 196 ~s~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~r 275 (488)
T KOG2414|consen 196 SSALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRR 275 (488)
T ss_pred hhHHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeec
Confidence 111111 111 12357889999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHH
Q 016073 235 GGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAH 314 (396)
Q Consensus 235 ~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~ 314 (396)
|++..+|+|+|+.|.|+...||.. ++..++++|+|++|.||.++||++||||||+++|++|+.|+++|+++++.|
T Consensus 276 -Gad~~AYpPVVAgG~na~tIHY~~----Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq 350 (488)
T KOG2414|consen 276 -GADRLAYPPVVAGGKNANTIHYVR----NNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQ 350 (488)
T ss_pred -CccccccCCeeecCcccceEEEee----cccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHH
Confidence 999999999999999999999987 888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCCCCccccC
Q 016073 315 NAVINAMKP--GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLT 392 (396)
Q Consensus 315 ~~~~~~~kp--G~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~ 392 (396)
+.+++.++| |.+..+|+......+.++|+++|+.+.+-.+++ .++.++||++||.+||||||+|..+ +..+|+
T Consensus 351 ~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~---~~~klcPHhVgHyLGmDVHD~p~v~--r~~pL~ 425 (488)
T KOG2414|consen 351 EECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMI---QAEKLCPHHVGHYLGMDVHDCPTVS--RDIPLQ 425 (488)
T ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHH---hhhhcCCcccchhcCcccccCCCCC--CCccCC
Confidence 999999999 999999999999999999999998887766666 2346999999999999999999876 445555
Q ss_pred CC
Q 016073 393 AD 394 (396)
Q Consensus 393 ~~ 394 (396)
++
T Consensus 426 pg 427 (488)
T KOG2414|consen 426 PG 427 (488)
T ss_pred CC
Confidence 43
No 4
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=3.8e-57 Score=448.02 Aligned_cols=343 Identities=27% Similarity=0.403 Sum_probs=277.9
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCC-CCCEEEEEEecCC-eEE
Q 016073 14 KELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVR-EPGFYGAIDIATG-KSI 91 (396)
Q Consensus 14 ~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~-~~~~~lvi~~~~g-~~~ 91 (396)
...|.++|+++++++++.+.+.+. +.+|+.++.....+.+|+.|||||+++|+||||+. .|++++++.+.++ +.+
T Consensus 5 ~~~~~~~~~~~~~r~~~~~~~~~~---~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~ 81 (443)
T PRK13607 5 ASLYKEHIATLQQRTRDALAREGL---DALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLW 81 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC---CEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEE
Confidence 467999999999998665543333 56778888888888899999999999999999996 7999998876534 555
Q ss_pred EEecCCCCCcccccccCCC-hhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhccccc
Q 016073 92 LFAPRLPPDYAVWLGKIKP-LSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKF 170 (396)
Q Consensus 92 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~ 170 (396)
||.| .+ .|.+.... .+.|.+.++++.+.+.+.+...|... .....++ +..... .....+...
T Consensus 82 l~~~-~d----~W~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~--~~~~~~------~~~~~~~~~ 144 (443)
T PRK13607 82 FYQP-VD----YWHNVEPLPESFWTEEVDIKALTKADGIASLLPAD----RGNVAYI--GEVPER------ALALGFEAS 144 (443)
T ss_pred EEec-Cc----cccCCCCCchHHHHHhcChHhcccHHHHHHhhccC----CCceEEe--cccccc------cccccCccc
Confidence 6665 34 49887644 44468888888777777777766542 2223322 211010 001111111
Q ss_pred cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCC
Q 016073 171 ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE 250 (396)
Q Consensus 171 ~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~ 250 (396)
..+..++.+.|.++|+|||++||++||+|++++++++..+++.+++|+||.||++.+.... . .++...+|++||++|+
T Consensus 145 ~~~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~-~~~~~~~y~~iva~G~ 222 (443)
T PRK13607 145 NINPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-G-QRDNDVPYGNIVALNE 222 (443)
T ss_pred ccChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-C-CCCcCCCCCcEEEecC
Confidence 2355678899999999999999999999999999999999999999999999998765432 2 3455689999999999
Q ss_pred CccccccCCCCCCCC-CcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 016073 251 NSAVLHYGHAAAPND-RTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVD 329 (396)
Q Consensus 251 ~~~~~h~~~~~~p~~-~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~ 329 (396)
|++++||.+ ++ +.+++||+|++|+|+.|+||++|+||||+ |.++++++++|++++++|+++++++|||+++.|
T Consensus 223 naa~~H~~~----~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~d 296 (443)
T PRK13607 223 HAAVLHYTK----LDHQAPAEMRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVD 296 (443)
T ss_pred cceEecCCc----cCCCCCCCCCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHH
Confidence 999999865 55 46899999999999999999999999996 678999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccC-ChHHHHHhhccccccccccccccCCcccCCCCCC
Q 016073 330 MHKLAEKIILESLKKGGVMVG-NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP 384 (396)
Q Consensus 330 v~~~~~~~~~~~l~~~g~~~~-~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~ 384 (396)
|+.++++++.+.|.++|++++ +.+++++.|+...||+|++||+|||++||.+.+.
T Consensus 297 v~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~ 352 (443)
T PRK13607 297 LHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFM 352 (443)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcc
Confidence 999999999999999999997 8999999998777999999999999999997653
No 5
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-52 Score=409.80 Aligned_cols=328 Identities=27% Similarity=0.366 Sum_probs=260.8
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCC---CCEEEEEEec
Q 016073 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVRE---PGFYGAIDIA 86 (396)
Q Consensus 10 ~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~---~~~~lvi~~~ 86 (396)
..++..++..|+.+++..|.+. ++ +.+++. +++|++||||+.. ...+.++.+.
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~----~~---~~~~~~-----------------~~~n~~yltg~~~~~~~~~~~~~~~~ 58 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEA----GL---DALLLT-----------------SPSNFYYLTGFDAFGFERLQALLVPA 58 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHc----CC---cEEEec-----------------CCCceEEEeCCCCCcccceEEEEEcC
Confidence 3567789999999999999974 44 444442 5789999999985 2234556677
Q ss_pred CCeEEEEecCCCCCcccccccCC--ChhHHHHHhCCcccc-chhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhh
Q 016073 87 TGKSILFAPRLPPDYAVWLGKIK--PLSYFQEKYMVNMVY-YTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQ 163 (396)
Q Consensus 87 ~g~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 163 (396)
+++++|+++..+...+.|...+. ....|... .... +.+.+.+.+..... ....+++... .. ......
T Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~----~~-~~~~~~ 128 (384)
T COG0006 59 EGEPVLFVRGRDEEAAKETSWIKLENVEVYEDD---EDPAAPLDLLGALLEELGL--AGKRIGIESA----SI-FLTLAA 128 (384)
T ss_pred CCceEEEEcchhHHHHHhhcccccCceEEEecC---CccccHHHHHHHHHHhccc--cccceEEEec----cC-ccCHHH
Confidence 88899999998877665554321 11111110 0000 22345555544311 2345654322 11 123333
Q ss_pred hhccccc--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 016073 164 FEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCS 241 (396)
Q Consensus 164 ~~~l~~~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~ 241 (396)
+..+... ..++++++..+.++|+|||++||+.||+|+.+++.++..+++.+++|+||.||++.+...+.+. |+...+
T Consensus 129 ~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~-G~~~~s 207 (384)
T COG0006 129 FERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKG-GAEGPS 207 (384)
T ss_pred HHHHHhhCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCccC
Confidence 4444332 1267899999999999999999999999999999999999999999999999999999888875 777789
Q ss_pred CcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 016073 242 YTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM 321 (396)
Q Consensus 242 ~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~ 321 (396)
|++||++|+|++.|||.+ +++.+++||+|+||+|+.|+|||||+||||++ |+|+++|+++|+.|+++|+++++++
T Consensus 208 f~~iv~~G~n~a~pH~~~----~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~aa~~~~ 282 (384)
T COG0006 208 FDTIVASGENAALPHYTP----SDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEAAIAAI 282 (384)
T ss_pred cCcEEeccccccCcCCCC----CcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999876 89999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--CcccCCC-CCCCCCccccCCCC
Q 016073 322 KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPG-GYPKVYMIKLTADG 395 (396)
Q Consensus 322 kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiG--l~~he~~-~~~~g~~~~~~~~~ 395 (396)
|||+++++|+.++++++.+ .|++. +|.|++|||+| +++||.| .+.+|....|++.|
T Consensus 283 rpG~~~~~vd~~ar~~i~~-----------------~g~~~-~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 283 RPGVTGGEVDAAARQVLEK-----------------AGYGL-YFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred CCCCcHHHHHHHHHHHHHh-----------------cCCcc-cccCCccccCCCCcccCcCccccCCCCCccccCCc
Confidence 9999999999999999986 56775 89999999999 9999999 68899999999876
No 6
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.6e-51 Score=403.28 Aligned_cols=328 Identities=15% Similarity=0.147 Sum_probs=252.2
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCC---EEEEEEec
Q 016073 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG---FYGAIDIA 86 (396)
Q Consensus 10 ~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~---~~lvi~~~ 86 (396)
..||.+||++|+++++++|+++ ++ |++ |++ .+.|++|||||.... ..+++++.
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~----~l--Dal-li~-----------------~~~ni~YltG~~~~~~~~~~~l~v~~ 59 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEAR----GI--DLL-IVT-----------------DPSNMAWLTGYDGWSFYVHQCVLLPP 59 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHc----CC--CEE-EEc-----------------CcccceeeccCCCCceEEEEEEEEcC
Confidence 6799999999999999999985 66 555 453 356999999998643 23344477
Q ss_pred CCeEEEEecCCCCCcc---cccc--cCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCch
Q 016073 87 TGKSILFAPRLPPDYA---VWLG--KIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKP 161 (396)
Q Consensus 87 ~g~~~l~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 161 (396)
+|++++++|.++...+ .|.. .+..+.+..- ......+.+.+.+.+++... ...+|+++. +.. +++.
T Consensus 60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~--~~~~ig~e~----~~~-~~~~ 130 (391)
T TIGR02993 60 EGEPIWYGRGQDANGAKRTAFMDHDNIVGYPDHYV--QSTERHPMDYLSEILQDRGW--DSLTIGVEM----DNY-YFSA 130 (391)
T ss_pred CCceEEEehhhhhhhHhheeeccccceeecccccc--cCCCCCHHHHHHHHHHhcCC--CCCcEEEec----CCC-ccCH
Confidence 8899999998765432 2421 1222211000 00001123446666655421 244686642 211 2344
Q ss_pred hhhhccccc--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---cCC
Q 016073 162 AQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGG 236 (396)
Q Consensus 162 ~~~~~l~~~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~---~~g 236 (396)
..+..|.+. ..+++++++++.++|+|||++||++||+|++|+++++..+.+.++||+||.||++.+...... ..|
T Consensus 131 ~~~~~l~~~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g 210 (391)
T TIGR02993 131 AAFASLQKHLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFG 210 (391)
T ss_pred HHHHHHHHhCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcC
Confidence 555555442 467889999999999999999999999999999999999999999999999999887654332 124
Q ss_pred CCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHH
Q 016073 237 CRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNA 316 (396)
Q Consensus 237 ~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~ 316 (396)
....+|.++++||+|++.||+.+ +++++++||+|++|+|+.|+|||+|+||||++ |+|+++++++|+.++++|++
T Consensus 211 ~~~~~~~~iv~sG~~~a~pH~~~----~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~~ 285 (391)
T TIGR02993 211 GDYPAIVPLLPSGADASAPHLTW----DDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGMEA 285 (391)
T ss_pred CCcCCcccccccCccccCCCCCC----CCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHHH
Confidence 44567778999999999999754 89999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccC-----CCCCCCCCcccc
Q 016073 317 VINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD-----PGGYPKVYMIKL 391 (396)
Q Consensus 317 ~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he-----~~~~~~g~~~~~ 391 (396)
+++++|||++++||++++++++++ .|+. ..|++|||||+++|+ .|.+.+|++.+|
T Consensus 286 ~i~~ikpG~~~~dv~~~~~~~~~~-----------------~G~~---~~h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L 345 (391)
T TIGR02993 286 GLEAAKPGNTCEDIANAFFAVLKK-----------------YGIH---KDSRTGYPIGLSYPPDWGERTMSLRPGDNTVL 345 (391)
T ss_pred HHHHcCCCCcHHHHHHHHHHHHHH-----------------cCCc---cCCCceeeeccCcCCCCCCccccccCCCCcee
Confidence 999999999999999999999876 4554 259999999999984 457889999999
Q ss_pred CCCC
Q 016073 392 TADG 395 (396)
Q Consensus 392 ~~~~ 395 (396)
+++|
T Consensus 346 ~~GM 349 (391)
T TIGR02993 346 KPGM 349 (391)
T ss_pred cCCC
Confidence 9876
No 7
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=4.7e-51 Score=398.27 Aligned_cols=306 Identities=21% Similarity=0.267 Sum_probs=235.4
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCCEEEEEEecCCeEEEEecCCC
Q 016073 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLP 98 (396)
Q Consensus 19 ~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~~~lvi~~~~g~~~l~~~~~~ 98 (396)
+|+++|++.|++. ++ |+++ ++ .+.|++|||||+...++++|. .++ .+|+++.+.
T Consensus 2 ~Rl~~l~~~m~~~----~l--Da~l-I~-----------------~~~n~~YLTGf~g~~g~llIt-~~~-~~l~td~ry 55 (361)
T PRK09795 2 TLLASLRDWLKAQ----QL--DAVL-LS-----------------SRQNKQPHLGISTGSGYVVIS-RES-AHILVDSRY 55 (361)
T ss_pred cHHHHHHHHHHHC----CC--CEEE-EC-----------------CccccccccCccCCCeEEEEE-CCC-CEEEcCcch
Confidence 5899999999884 56 5554 53 356899999999766666664 344 567776644
Q ss_pred CCc--ccccccCCChhHHHHHhCCcccc--chhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhcccc-cccc
Q 016073 99 PDY--AVWLGKIKPLSYFQEKYMVNMVY--YTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEK-FETE 173 (396)
Q Consensus 99 ~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~-~~~~ 173 (396)
... +.+.+ .+.+. ..+.+.+.|.+.+...+.++|+++.. . ++...+..+.. +...
T Consensus 56 ~~qa~~~~~~-------------~~v~~~~~~~~~~~~L~~~L~~~~~~~Ig~e~~----~---~s~~~~~~L~~~l~~~ 115 (361)
T PRK09795 56 YADVEARAQG-------------YQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQ----Q---VSWETAHRWQSELNAK 115 (361)
T ss_pred HHHHHhhCCC-------------ceEEEecCCccHHHHHHHHHHhcCCcEEEEecC----c---ccHHHHHHHHHhcCcc
Confidence 322 11110 11110 11122333444332213467876432 1 23333434422 1223
Q ss_pred ccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCcc
Q 016073 174 LNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA 253 (396)
Q Consensus 174 ~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~ 253 (396)
+++. .+..+|+|||++||++||+|++|+++++..+.+.++||+||.||++.+...+.+. |++..+|++||+||+|++
T Consensus 116 ~~~~--~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG~~~~ 192 (361)
T PRK09795 116 LVSA--TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQ-GAEKASFDTIVASGWRGA 192 (361)
T ss_pred cccc--cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEecccc
Confidence 3333 4899999999999999999999999999999999999999999999998888764 888899999999999999
Q ss_pred ccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCC-CCHH---HHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 016073 254 VLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-FTSD---QSLIYNAVLKAHNAVINAMKPGVCWVD 329 (396)
Q Consensus 254 ~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~-~~~~---~~~~~~~~~~a~~~~~~~~kpG~~~~~ 329 (396)
.||+. |++++|++||+|++|+|+.|+|||+|+||||+++|+ ++++ ++++|++++++|.++++++|||++++|
T Consensus 193 ~ph~~----~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~ 268 (361)
T PRK09795 193 LPHGK----ASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQ 268 (361)
T ss_pred ccCCC----CCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 99965 489999999999999999999999999999999443 3433 789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCCCCccccCCCC
Q 016073 330 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 330 v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~~~~ 395 (396)
|++++++++++ .|++. +|.|++||||||++||.|.+.++...+|+++|
T Consensus 269 v~~~~~~~~~~-----------------~g~~~-~~~h~~GHgiGl~~he~p~i~~~~~~~l~~gm 316 (361)
T PRK09795 269 VDDAARRVITE-----------------AGYGD-YFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGM 316 (361)
T ss_pred HHHHHHHHHHH-----------------cCCCc-cCCCCCCccCCccccCCCCcCCCCCCCcCCCC
Confidence 99999999986 67775 89999999999999999999999999999876
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=7.6e-47 Score=372.84 Aligned_cols=318 Identities=15% Similarity=0.143 Sum_probs=239.4
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCC-------E-EEEEEecC-CeE
Q 016073 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG-------F-YGAIDIAT-GKS 90 (396)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~-------~-~lvi~~~~-g~~ 90 (396)
-++|+++.|+++ ++ +.+|++ .++||+|||||..+. . .+++.+.+ ++|
T Consensus 12 ~~~rlr~~m~~~----gl---D~lvl~-----------------~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p 67 (406)
T PRK14575 12 VSRKLRTIMERD----NI---DAVIVT-----------------TCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIP 67 (406)
T ss_pred HHHHHHHHHHHc----CC---CEEeec-----------------CcchheeecccccccceecccCCceEEEEEcCCCCC
Confidence 567888888885 77 555563 467999999997533 1 22344655 456
Q ss_pred E-EEecCCCCCccccc------ccCCChhHHHHHhC----------Cccccchh----hHHHHHHhcccCCCCCEEEEec
Q 016073 91 I-LFAPRLPPDYAVWL------GKIKPLSYFQEKYM----------VNMVYYTD----EIVGVLQGHYKEPGKPLLFLLH 149 (396)
Q Consensus 91 ~-l~~~~~~~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~~ 149 (396)
+ +++|+++..+..-. ..+..+.+....+. -....+.+ .+.+.|++.. ..+++|+++.
T Consensus 68 ~~~i~p~~E~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~igve~ 145 (406)
T PRK14575 68 SLIIMNEFEAASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDAR--VLNKKIAIDL 145 (406)
T ss_pred ceEEechhhhhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcC--CcCCEEEEcc
Confidence 6 77888776543211 01111111000000 00011223 3344554432 1467897643
Q ss_pred CCCCCCcCCCchhhhhccccc--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHH
Q 016073 150 GLNTDSNNFSKPAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMF 227 (396)
Q Consensus 150 g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~ 227 (396)
+. .+...+..|... +.++++++.++.++|+|||++||++||+|+++++++++.+++.++||+||.||++.+
T Consensus 146 ----~~---~~~~~~~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~ 218 (406)
T PRK14575 146 ----NI---MSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAY 218 (406)
T ss_pred ----CC---CCHHHHHHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 22 234444444332 356889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHH
Q 016073 228 LHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIY 307 (396)
Q Consensus 228 ~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~ 307 (396)
...+... |....++.+++++|.+ ..+|+. |+++++++||+|++|+|+.|+|||+|+||||++ |+||++|+++|
T Consensus 219 ~~~~~~~-g~~~~~~~~~v~~G~~-~~~h~~----~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~ 291 (406)
T PRK14575 219 KAAVMSK-SETHFSRFHLISVGAD-FSPKLI----PSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIY 291 (406)
T ss_pred HHHHHHc-CCCcCCcCceEEECCC-cccCCC----CCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHH
Confidence 8887765 4434444478889988 457854 589999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--CcccCCCCCCC
Q 016073 308 NAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPK 385 (396)
Q Consensus 308 ~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiG--l~~he~~~~~~ 385 (396)
++++++++++++++|||++++||++++++++++ .|+.+ ++.|++||||| +.+||.|.+..
T Consensus 292 ~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~-----------------~G~~~-~~~~~~GHGiG~~lg~~e~P~i~~ 353 (406)
T PRK14575 292 QTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK-----------------SGLPN-YNRGHLGHGNGVFLGLEESPFVST 353 (406)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-----------------cCCcc-ccCCCCCCcccCCCCCccCCCCCC
Confidence 999999999999999999999999999999986 56765 78899999999 59999999999
Q ss_pred CCccccCCCC
Q 016073 386 VYMIKLTADG 395 (396)
Q Consensus 386 g~~~~~~~~~ 395 (396)
+++++|+++|
T Consensus 354 ~~~~~Le~GM 363 (406)
T PRK14575 354 HATESFTSGM 363 (406)
T ss_pred CCCCCcCCCC
Confidence 9999998876
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=3.4e-46 Score=368.12 Aligned_cols=318 Identities=15% Similarity=0.129 Sum_probs=237.8
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCC-------E-EEEEEecC-CeE
Q 016073 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG-------F-YGAIDIAT-GKS 90 (396)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~-------~-~lvi~~~~-g~~ 90 (396)
-.+|+++.|+++ ++ +.+|++ .+.||+||||+.... . ++++...+ ++|
T Consensus 12 ~~~r~r~~M~~~----gl---dalll~-----------------~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p 67 (405)
T PRK14576 12 VSRKARVVMERE----GI---DALVVT-----------------VCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIP 67 (405)
T ss_pred HHHHHHHHHHHc----CC---CEEEec-----------------cccceeeeccccccceeeeccCCeEEEEecCCCCCC
Confidence 457888888885 77 554563 467999999997441 1 12222234 456
Q ss_pred -EEEecCCCCCccc------ccccCCChhH-------HHHHhCCc--cccch----hhHHHHHHhcccCCCCCEEEEecC
Q 016073 91 -ILFAPRLPPDYAV------WLGKIKPLSY-------FQEKYMVN--MVYYT----DEIVGVLQGHYKEPGKPLLFLLHG 150 (396)
Q Consensus 91 -~l~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~~--~~~~~----~~~~~~l~~~~~~~~~~~i~~~~g 150 (396)
++++|.++..... |......+.+ |......+ ..... +.+.+.|.+.. ..+.+|+++.
T Consensus 68 ~~~i~~~~e~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~rigve~- 144 (405)
T PRK14576 68 SQIIMNEFEAASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAG--VLDKTIAIEL- 144 (405)
T ss_pred cEEEechhhhhhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhC--CCCCEEEEcc-
Confidence 7788887655321 1111122211 10000000 00011 34455565543 2467886632
Q ss_pred CCCCCcCCCchhhhhccccc--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 016073 151 LNTDSNNFSKPAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFL 228 (396)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~ 228 (396)
+. ++...+..+... +.+++|++.++.++|+|||++||++||+|++++++++..+++.++||+||.||++.+.
T Consensus 145 ---~~---~~~~~~~~l~~~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~ 218 (405)
T PRK14576 145 ---QA---MSNGGKGVLDKVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFK 218 (405)
T ss_pred ---CC---CCHHHHHHHHhhCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 22 233333334321 3578899999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHH
Q 016073 229 HHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYN 308 (396)
Q Consensus 229 ~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~ 308 (396)
..+... |....++.++|++|++ +.+|+. |+++++++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+
T Consensus 219 ~~~~~~-g~~~~~~~~~v~~G~~-~~~h~~----~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~ 291 (405)
T PRK14576 219 AAVMSF-PETNFSRFNLISVGDN-FSPKII----ADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYD 291 (405)
T ss_pred HHHHHc-CCCcCCCCCEEEECCc-ccCCCC----CCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHH
Confidence 887764 5333444579999999 458864 488999999999999999999999999999988 999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--CcccCCCCCCCC
Q 016073 309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKV 386 (396)
Q Consensus 309 ~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiG--l~~he~~~~~~g 386 (396)
+++++++++++++|||++++||++++++++++ .|+.+ ++.|++|||+| +.+||.|.+.++
T Consensus 292 ~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~-----------------~G~~~-~~~~~~GHgiG~~l~~~e~P~i~~~ 353 (405)
T PRK14576 292 TIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKT-----------------SGLPH-YNRGHLGHGDGVFLGLEEVPFVSTQ 353 (405)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-----------------cCCcc-ccCCCCCCCCCCCCCcCcCCCcCCC
Confidence 99999999999999999999999999999986 56664 78899999999 899999999999
Q ss_pred CccccCCCC
Q 016073 387 YMIKLTADG 395 (396)
Q Consensus 387 ~~~~~~~~~ 395 (396)
++.+|+++|
T Consensus 354 ~~~~Le~GM 362 (405)
T PRK14576 354 ATETFCPGM 362 (405)
T ss_pred CCCccCCCC
Confidence 999999876
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=7.1e-41 Score=320.56 Aligned_cols=234 Identities=18% Similarity=0.226 Sum_probs=197.0
Q ss_pred hHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhccccc--cccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 016073 128 EIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSE 205 (396)
Q Consensus 128 ~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~ 205 (396)
.+.+.|.+.. ...++|+++. +. ++...+..|++. ..++++++.++.++|+|||++||+.||+|++++++
T Consensus 43 ~l~~~l~~~g--~~~~rigve~----~~---~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~ 113 (323)
T PRK15173 43 ILKDALNDAR--VLNKKIAIDL----NI---MSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEY 113 (323)
T ss_pred HHHHHHHHcC--ccCCEEEEec----Cc---cCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3555555443 2457897643 22 244455555432 35778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCce
Q 016073 206 AHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFY 285 (396)
Q Consensus 206 ~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY 285 (396)
++..+.+.+++|+||.||++.+...+.+. |....++.+++++|.++ .+|+ .|+++++++||+|++|+|+.|+||
T Consensus 114 ~~~~~~~~i~~G~tE~el~a~~~~~~~~~-g~~~~~~~~~i~~G~~~-~~h~----~~~~~~l~~Gd~V~iD~g~~~~GY 187 (323)
T PRK15173 114 GITEASKLIRVGCTSAELTAAYKAAVMSK-SETHFSRFHLISVGADF-SPKL----IPSNTKACSGDLIKFDCGVDVDGY 187 (323)
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECCCC-ccCC----CCCCCccCCCCEEEEEeCccCCCE
Confidence 99999999999999999999998877764 54444455688888884 5775 358899999999999999999999
Q ss_pred eeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccc
Q 016073 286 GSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFM 365 (396)
Q Consensus 286 ~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~ 365 (396)
|+|+||||++ |+|+++|+++|++++++++++++++|||++++||++++++++++ .|+.+ ++
T Consensus 188 ~aDitRT~~v-G~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~-----------------~G~~~-~~ 248 (323)
T PRK15173 188 GADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK-----------------SGLPN-YN 248 (323)
T ss_pred eeeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-----------------cCCcc-cc
Confidence 9999999999 99999999999999999999999999999999999999999986 56664 78
Q ss_pred ccccccccCC--cccCCCCCCCCCccccCCCC
Q 016073 366 PHGLGHFLGI--DTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 366 ~h~~GHgiGl--~~he~~~~~~g~~~~~~~~~ 395 (396)
.|++|||||+ .+||.|.+..+.+.+|+++|
T Consensus 249 ~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 249 RGHLGHGNGVFLGLEESPFVSTHATESFTSGM 280 (323)
T ss_pred CCCCCCcCCCCCCcCCCCCCCCCCCCccCCCC
Confidence 8999999995 99999999989999998876
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=7.1e-40 Score=303.39 Aligned_cols=185 Identities=17% Similarity=0.167 Sum_probs=169.0
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCcceeeeCCCccccccCCC
Q 016073 186 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 260 (396)
Q Consensus 186 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~ 260 (396)
.|||++||++||+|+++++++++.+++.++||+||.||++.+...+.+. |+. +.+|++++++|+|++.+|+.+
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~i~~g~n~~~~H~~p- 80 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKH-GATSEQKGYNGYPYAICASVNDEMCHAFP- 80 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEeccCCEeecCCC-
Confidence 6999999999999999999999999999999999999999998888774 654 357888888999999999764
Q ss_pred CCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016073 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (396)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 340 (396)
++++|++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+.++++++++++++|||++++||+.++++++++
T Consensus 81 ---~~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~ 156 (248)
T PRK12897 81 ---ADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVAN 156 (248)
T ss_pred ---CCcccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH
Confidence 88999999999999999999999999999999 99999999999999999999999999999999999999999886
Q ss_pred HHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC----CCCccccCCCC
Q 016073 341 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP----KVYMIKLTADG 395 (396)
Q Consensus 341 ~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~----~g~~~~~~~~~ 395 (396)
.|+. .+.|.+|||||+++||.|.+. .|+.++|+++|
T Consensus 157 -----------------~g~~--~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gm 196 (248)
T PRK12897 157 -----------------EGFS--VARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGM 196 (248)
T ss_pred -----------------cCCc--cCCCeEECccCCcccCCCccCCCCCCCCCCCcCCCC
Confidence 5565 357999999999999999875 47788898876
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.4e-39 Score=302.15 Aligned_cols=186 Identities=18% Similarity=0.199 Sum_probs=168.3
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC---------CCCCCcceeeeCCCcccc
Q 016073 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC---------RHCSYTCICATGENSAVL 255 (396)
Q Consensus 185 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~---------~~~~~~~iv~sG~~~~~~ 255 (396)
..|||++||++||+|++|+.+++..+.+.++||+||.||++.+...+.+. |+ .+.+|++++++|.|++++
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~-g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEE-NVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCcccccCCCCcccCCCcceEEecccccc
Confidence 36999999999999999999999999999999999999999998887764 32 236799999999999999
Q ss_pred ccCCCCCCCCCcccCCCEEEEEeCe---------------------------eeCceeeeeeeeEeeCCCCCHHHHHHHH
Q 016073 256 HYGHAAAPNDRTFEDGDMALLDMGA---------------------------EYQFYGSDITCSFPVNGKFTSDQSLIYN 308 (396)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~---------------------------~~~gY~aD~tRT~~v~G~~~~~~~~~~~ 308 (396)
|+. |++++|++||+|++|+|+ .|+||++|+||||++ |+|+++|+++|+
T Consensus 81 H~~----p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~ 155 (286)
T PRK07281 81 HAF----PRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMD 155 (286)
T ss_pred CCC----CCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHH
Confidence 965 489999999999999997 489999999999988 999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC----
Q 016073 309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP---- 384 (396)
Q Consensus 309 ~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~---- 384 (396)
+++++|+++++++|||++++||++++++++++ .|++. +.|++|||||+++||.|.++
T Consensus 156 ~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~-----------------~G~~~--~~~~~GHGIGl~~hE~P~i~~~~~ 216 (286)
T PRK07281 156 VTKEAMYRGIEQAVVGNRIGDIGAAIQEYAES-----------------RGYGV--VRDLVGHGVGPTMHEEPMVPNYGT 216 (286)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-----------------cCCcc--CCCeeeeeCCCccCCCCcCCCccc
Confidence 99999999999999999999999999999886 56663 68999999999999999875
Q ss_pred CCCccccCCCC
Q 016073 385 KVYMIKLTADG 395 (396)
Q Consensus 385 ~g~~~~~~~~~ 395 (396)
+|++.+|++.|
T Consensus 217 ~~~~~~Le~GM 227 (286)
T PRK07281 217 AGRGLRLREGM 227 (286)
T ss_pred CCCCCEECCCC
Confidence 57788888876
No 13
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.5e-38 Score=294.10 Aligned_cols=197 Identities=48% Similarity=0.779 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (396)
|++||+|++++++++..+.+.++||+||.||++.+...+.+. |+. .+|++++++|+|+..+|+.+ ++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~-G~~-~~~~~~v~~g~~~~~~H~~~----~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSR-GAR-LAYSYIVAAGSNAAILHYVH----NDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCC-cCCCCeEEECCCccccCCCc----CCCcCCCCC
Confidence 679999999999999999999999999999999998888775 655 67889999999999999754 889999999
Q ss_pred EEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 016073 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (396)
Q Consensus 273 ~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~ 352 (396)
+|++|+|+.|+||++|++|||+++|+|+++++++|++++++++++++++|||++++||++++++++++.+.++|++++.+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999998679999999999999999999999999999999999999999999888999987665
Q ss_pred HHHHHhhccccccccccccccCCcccCCCCC--CCCCccccCCCC
Q 016073 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGY--PKVYMIKLTADG 395 (396)
Q Consensus 353 ~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~--~~g~~~~~~~~~ 395 (396)
++....+....+|+|++||+||+++||.|.+ .++.+++|+++|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~~~~~~~~l~~GM 199 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLRYLRRARPLEPGM 199 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccccCCCCCCCCCCC
Confidence 5544444444589999999999999999987 788899999876
No 14
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-38 Score=299.83 Aligned_cols=192 Identities=18% Similarity=0.233 Sum_probs=168.9
Q ss_pred HHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-------CCCCcceeeeCC
Q 016073 179 PILSECRV-FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-------HCSYTCICATGE 250 (396)
Q Consensus 179 ~~i~~~R~-vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-------~~~~~~iv~sG~ 250 (396)
..++++|. |||++||+.||+|++|++++++++++.+++|+||.||++.+...+... |+. ..+|++++++|.
T Consensus 34 ~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~-G~~~~~~~~~~~~f~~~v~~g~ 112 (291)
T PRK12318 34 LYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEY-NAIPAPLNYGSPPFPKTICTSL 112 (291)
T ss_pred hccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCccccccCCCCCCcceEeec
Confidence 34455665 999999999999999999999999999999999999998777666553 532 246888899999
Q ss_pred CccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Q 016073 251 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDM 330 (396)
Q Consensus 251 ~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v 330 (396)
|+.++|+.+ +++++++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+.++++++++++++|||++++||
T Consensus 113 n~~~~H~~p----~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv 187 (291)
T PRK12318 113 NEVICHGIP----NDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLYEI 187 (291)
T ss_pred cceeecCCC----CCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 999999654 89999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCC---CCccccCCCC
Q 016073 331 HKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPK---VYMIKLTADG 395 (396)
Q Consensus 331 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~---g~~~~~~~~~ 395 (396)
++++++++++ .|+.. ..|.+||||||++||.|.++. +...+|+++|
T Consensus 188 ~~a~~~~~~~-----------------~G~~~--~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GM 236 (291)
T PRK12318 188 GEVIENCADK-----------------YGFSV--VDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGM 236 (291)
T ss_pred HHHHHHHHHH-----------------cCCcc--CCCcccCCcCccccCCCcccCcCCCCCCEeCCCC
Confidence 9999999886 45542 468899999999999998853 6678888876
No 15
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=8.1e-38 Score=289.83 Aligned_cols=185 Identities=19% Similarity=0.292 Sum_probs=166.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCcceeeeCCCccccccCCC
Q 016073 186 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 260 (396)
Q Consensus 186 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~ 260 (396)
+|||++||++||+|+++++++++.+.+.++||+||.||++.+...+.+. |+. ..+|++++++|.|+..+|+.+
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~H~~~- 79 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKH-GAKPAFLGYYGFPGSVCISVNEVVIHGIP- 79 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCCccccCCCCCCceeEeccccEEEecCC-
Confidence 6999999999999999999999999999999999999999998887764 543 235777888999999999754
Q ss_pred CCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016073 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (396)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 340 (396)
++++|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++.+|||++++||++++++++.+
T Consensus 80 ---~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 155 (247)
T TIGR00500 80 ---DKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEA 155 (247)
T ss_pred ---CCcccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 89999999999999999999999999999999999999999886
Q ss_pred HHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC----CCCccccCCCC
Q 016073 341 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP----KVYMIKLTADG 395 (396)
Q Consensus 341 ~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~----~g~~~~~~~~~ 395 (396)
.|+.. +.|.+|||||+++||.|.+. .+++++|+++|
T Consensus 156 -----------------~g~~~--~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gm 195 (247)
T TIGR00500 156 -----------------KGFSV--VREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGM 195 (247)
T ss_pred -----------------cCCEe--ccCccCCccCcccCCCCccCCcCcCCCCCEecCCC
Confidence 45543 46889999999999999664 46788898876
No 16
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=4.2e-37 Score=280.80 Aligned_cols=179 Identities=18% Similarity=0.207 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCC------cceeeeCCCccccccCCCCCCCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY------TCICATGENSAVLHYGHAAAPNDR 266 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~------~~iv~sG~~~~~~h~~~~~~p~~~ 266 (396)
|++||+|++++++++..+++.++||+||.||++.+...+.+. |....++ .+++++|+|++.+|+. |+++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~-ga~~~~~~~~~~~~~~v~~G~~~~~~H~~----~~~r 75 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVRE-IAKTFPEVELMDTWTWFQSGINTDGAHNP----VTNR 75 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCCcccccCcceEEEeeccccccCCC----CCCc
Confidence 679999999999999999999999999999999988887764 5433332 2688999999999965 4899
Q ss_pred cccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCC
Q 016073 267 TFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGG 346 (396)
Q Consensus 267 ~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g 346 (396)
+|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+++.++|+++++++|||++++||++++++++++
T Consensus 76 ~l~~GD~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~------ 148 (228)
T cd01090 76 KVQRGDILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYRE------ 148 (228)
T ss_pred ccCCCCEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH------
Confidence 99999999999999999999999999998 99999999999999999999999999999999999999999986
Q ss_pred CccCChHHHHHhhccccccccccccccCCcccCCC-----CCCCCCccccCCCC
Q 016073 347 VMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPG-----GYPKVYMIKLTADG 395 (396)
Q Consensus 347 ~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~-----~~~~g~~~~~~~~~ 395 (396)
+|+.. ++.|++||+||+.+||.| .+..+.+.+|++.|
T Consensus 149 -----------~G~~~-~~~~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GM 190 (228)
T cd01090 149 -----------HDLLR-YRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGM 190 (228)
T ss_pred -----------cCCCc-ccccccCcccccccccCCCccccccCCCCCCccCCCC
Confidence 56665 789999999999999987 45677888898876
No 17
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.5e-36 Score=280.77 Aligned_cols=186 Identities=18% Similarity=0.197 Sum_probs=166.8
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCcceeeeCCCccccccCC
Q 016073 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGH 259 (396)
Q Consensus 185 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~ 259 (396)
-+|||++||++||+|++++++++..+++.++||+||.|+++.+...+.+. |.. ..+|++++++|.|+..+|+.+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~-G~~~~~~~~~~~~~~~~~g~~~~~~h~~~ 81 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQ-GAIPAPLGYHGFPKSICTSVNEVVCHGIP 81 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHC-CCEecccCCCCCCcCeEecccceeecCCC
Confidence 46999999999999999999999999999999999999999888777764 542 346777888999999999654
Q ss_pred CCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016073 260 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (396)
Q Consensus 260 ~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~ 339 (396)
++++|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+.++++++++++++|||++++||+++++++++
T Consensus 82 ----~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~ 156 (252)
T PRK05716 82 ----SDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAE 156 (252)
T ss_pred ----CCcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999 9999999999999999999999999999999999999999988
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCC----CCCCccccCCCC
Q 016073 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGY----PKVYMIKLTADG 395 (396)
Q Consensus 340 ~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~----~~g~~~~~~~~~ 395 (396)
+ .|+.. +.|.+|||||+++||.|.+ .++++.+|+++|
T Consensus 157 ~-----------------~g~~~--~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 197 (252)
T PRK05716 157 A-----------------EGFSV--VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGM 197 (252)
T ss_pred H-----------------cCCee--ecCccccccCCccCCCCccCcCCCCCCCCEecCCC
Confidence 6 45542 5688999999999999976 457788898876
No 18
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.5e-36 Score=281.24 Aligned_cols=187 Identities=20% Similarity=0.191 Sum_probs=166.6
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCCcceeeeCCCccccccC
Q 016073 184 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYG 258 (396)
Q Consensus 184 ~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~ 258 (396)
+++|||++||++||+|++++++++..+++.++||+||.||++.+...+.+. |+. ...|++++++|.|...+|+.
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEH-GAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHC-CCEeCcccCCCCCcceEecCCCeeEecC
Confidence 468999999999999999999999999999999999999999998887764 543 34577778888999999965
Q ss_pred CCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016073 259 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (396)
Q Consensus 259 ~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 338 (396)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++++++|+.++++++++++++|||++++||++++++++
T Consensus 86 ----p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 160 (255)
T PRK12896 86 ----PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFA 160 (255)
T ss_pred ----CCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 488999999999999999999999999999998 999999999999999999999999999999999999999998
Q ss_pred HHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC-----CCCccccCCCC
Q 016073 339 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP-----KVYMIKLTADG 395 (396)
Q Consensus 339 ~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~-----~g~~~~~~~~~ 395 (396)
.+ .|+. .+.|.+||+||+++||.|.+. ++.+.+|+++|
T Consensus 161 ~~-----------------~G~~--~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~Gm 203 (255)
T PRK12896 161 KK-----------------NGYS--VVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGM 203 (255)
T ss_pred HH-----------------cCCE--eccCcccCCcCcccccCCCccccCCCCCCCCEecCCc
Confidence 86 4554 367899999999999999532 56778888775
No 19
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=7.3e-36 Score=269.57 Aligned_cols=179 Identities=32% Similarity=0.444 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (396)
|++||+|+++++.++..+.+.++||+||.||++.+...+.++ |++..+|++++++|.|+..+|+.+ +++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~~~~~~~~~v~~g~~~~~~h~~~----~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKL-GAEGPSFDTIVASGPNSALPHGVP----SDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECccccccCCCC----CCcCcCCCC
Confidence 679999999999999999999999999999999998888774 777789999999999999999754 789999999
Q ss_pred EEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 016073 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (396)
Q Consensus 273 ~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~ 352 (396)
+|++|+|+.|+||++|++||+++ |+++++++++|+.+.++++++++++|||++++||++++++++++
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~------------ 142 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEE------------ 142 (208)
T ss_pred EEEEEeeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999 99999999999999999999999999999999999999999886
Q ss_pred HHHHHhhccccccccccccccCCcccCCCCCCCCCccccCCCC
Q 016073 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 353 ~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~~~~ 395 (396)
.|+.+ +|+|++||+||+++||.|.+.++.+.+|+++|
T Consensus 143 -----~g~~~-~~~~~~Gh~iG~~~~e~p~i~~~~~~~l~~gm 179 (208)
T cd01092 143 -----AGYGE-YFIHRTGHGVGLEVHEAPYISPGSDDVLEEGM 179 (208)
T ss_pred -----cCccc-cCCCCCccccCcccCcCCCcCCCCCCCcCCCC
Confidence 55654 79999999999999999999999999999887
No 20
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-35 Score=288.66 Aligned_cols=191 Identities=19% Similarity=0.273 Sum_probs=168.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC----CCCCCcceeeeCCCccccc
Q 016073 181 LSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC----RHCSYTCICATGENSAVLH 256 (396)
Q Consensus 181 i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~----~~~~~~~iv~sG~~~~~~h 256 (396)
+.+.|.|||++||+.||+|++++.++++.+.+.++||+||.||++.+...+.++++. .+..|+.++.+|.|..++|
T Consensus 131 ~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~H 210 (396)
T PLN03158 131 LQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICH 210 (396)
T ss_pred cccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccC
Confidence 446799999999999999999999999999999999999999999998888876432 1246788888999999999
Q ss_pred cCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016073 257 YGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEK 336 (396)
Q Consensus 257 ~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~ 336 (396)
+ .|++++|++||+|.+|+|+.++||++|++|||+| |+++++++++|++++++++++++++|||++++||++++++
T Consensus 211 g----ip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~ 285 (396)
T PLN03158 211 G----IPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINR 285 (396)
T ss_pred C----CCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 5 4589999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC--CCC--ccccCCCC
Q 016073 337 IILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP--KVY--MIKLTADG 395 (396)
Q Consensus 337 ~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~--~g~--~~~~~~~~ 395 (396)
++.+ .|++ .+.|.+|||||+.+||.|.+. .++ ..+|++.|
T Consensus 286 ~~~~-----------------~G~~--~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GM 329 (396)
T PLN03158 286 HATM-----------------SGLS--VVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQ 329 (396)
T ss_pred HHHH-----------------cCCC--ccCCccCCccccccCCCCCCCcccCCCCCCEecCCc
Confidence 9875 4554 367889999999999999886 222 25666654
No 21
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.3e-34 Score=266.15 Aligned_cols=180 Identities=18% Similarity=0.197 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HccCC--CcHHHHHHHHHHHHHHcCCCC---------CCCCcceeeeCCCc-ccc
Q 016073 193 LALIQFANDISSEAHVEVMK-----KTRVG--MKEYQMESMFLHHTYMYGGCR---------HCSYTCICATGENS-AVL 255 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~-----~i~~G--~sE~ei~~~~~~~~~~~~g~~---------~~~~~~iv~sG~~~-~~~ 255 (396)
+++||+|+++++.+|+..+. .|.+| +||.+|+..++..+... +.. .++|+|||+||.|+ ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~-~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDK-KKYKAKLDPEQLDWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCc-hhhhcCCCHHHcCcccCCeEeECcCcccCC
Confidence 46899999999999986665 78999 99999999999888654 322 58999999999999 788
Q ss_pred ccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 016073 256 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 335 (396)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~ 335 (396)
|+.+ +++.+..|++|++|+|++|+|||+|+||||++ | |+++|+++|++++++|+++++++|||++++||+++++
T Consensus 80 h~~~----s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~ 153 (243)
T cd01091 80 SSSS----SDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTL 153 (243)
T ss_pred CCCC----CccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 9654 88899999999999999999999999999998 5 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCC-CCCCCccccCCCC
Q 016073 336 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGG-YPKVYMIKLTADG 395 (396)
Q Consensus 336 ~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~-~~~g~~~~~~~~~ 395 (396)
+++++. | .++. .+|+|++||+|||++||.|. +.+++..+|++.|
T Consensus 154 ~~i~~~----~-----------~~~~-~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GM 198 (243)
T cd01091 154 DYIKKK----K-----------PELE-PNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGM 198 (243)
T ss_pred HHHHHh----C-----------hhHH-HhCcCCcccccCcccccCccccCCCCCCCcCCCC
Confidence 999862 1 1244 37999999999999999875 6788888888875
No 22
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.1e-34 Score=261.74 Aligned_cols=178 Identities=29% Similarity=0.459 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCCE
Q 016073 194 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDM 273 (396)
Q Consensus 194 ~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~ 273 (396)
++||+|++++++++..+++.++||+||.||++.+...++.+.|...++|++++++|.|+..+|+.+ ++++|++||+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----~~~~l~~gd~ 76 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTP----TDRRLQEGDI 76 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBC----CSSBESTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceec----cceeeecCCc
Confidence 589999999999999999999999999999999998855556778899999999999999999854 8899999999
Q ss_pred EEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChH
Q 016073 274 ALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVD 353 (396)
Q Consensus 274 v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~ 353 (396)
|++|+|+.|+||++|++||+++ | |+++|+++|+.++++++.+++.+|||++++||++++++++.+
T Consensus 77 v~id~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~------------- 141 (207)
T PF00557_consen 77 VIIDFGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEE------------- 141 (207)
T ss_dssp EEEEEEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHH-------------
T ss_pred ceeeccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHh-------------
Confidence 9999999999999999999998 8 999999999999999999999999999999999999999986
Q ss_pred HHHHhhccccccccccccccCCcccCC-CCCC-CCCccccCCCC
Q 016073 354 EMMAARLGAVFMPHGLGHFLGIDTHDP-GGYP-KVYMIKLTADG 395 (396)
Q Consensus 354 ~~~~~g~~~~~~~h~~GHgiGl~~he~-~~~~-~g~~~~~~~~~ 395 (396)
.|+. .+++|.+||+||+++||. |.+. .+.+++|+++|
T Consensus 142 ----~g~~-~~~~~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 142 ----YGLE-EPYPHGLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp ----TTEG-EEBTSSSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ----hccc-ceeeecccccccccccccceeeecccccceecCCC
Confidence 5663 478999999999999997 9987 88999998876
No 23
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.8e-33 Score=258.03 Aligned_cols=178 Identities=23% Similarity=0.255 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCCcceeeeCCCccccccCCCCCCCCCc
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLHYGHAAAPNDRT 267 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h~~~~~~p~~~~ 267 (396)
|+.||+|++++++++..+++.++||+||.||++.+...+.+. |+.. ..|++.+.+|.|+..+|+. |++++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~h~~----~~~~~ 75 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEH-GAYPAPLGYYGFPKSICTSVNEVVCHGI----PDDRV 75 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCcccccCCCCCcceecCCCCceeCCC----CCCcc
Confidence 689999999999999999999999999999999998888765 5432 3456677888999999965 48999
Q ss_pred ccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 016073 268 FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV 347 (396)
Q Consensus 268 l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~ 347 (396)
|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+.+.++++++++++|||++++||++++++++++
T Consensus 76 l~~Gd~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~------- 147 (238)
T cd01086 76 LKDGDIVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEK------- 147 (238)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999999 99999999999999999999999999999999999999999886
Q ss_pred ccCChHHHHHhhccccccccccccccCCcccCCCCCC----CCCccccCCCC
Q 016073 348 MVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP----KVYMIKLTADG 395 (396)
Q Consensus 348 ~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~----~g~~~~~~~~~ 395 (396)
.|+. .+.|.+||+||+.+||.|.+. ++++.+|++.|
T Consensus 148 ----------~G~~--~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 187 (238)
T cd01086 148 ----------NGYS--VVREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGM 187 (238)
T ss_pred ----------cCcc--eecCccccCCCCccccCCCcCCccCCCCCCEecCCC
Confidence 4554 367889999999999999776 78888888876
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=3.6e-33 Score=253.79 Aligned_cols=176 Identities=26% Similarity=0.317 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCC--CcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCC---CCcc
Q 016073 194 ALIQFANDISSEAHVEVMKKTRVG--MKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPN---DRTF 268 (396)
Q Consensus 194 ~~~r~Aa~i~~~~~~~~~~~i~~G--~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~---~~~l 268 (396)
+.||.+..++ ++++.+.+.++|| +||.||++.++..+...++....+|+++|++|+|++.+|+.+ + +++|
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p----~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVALV-EFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSP----TEESNRKI 79 (224)
T ss_pred HHHHHHHHHH-HHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCc----CcccCccc
Confidence 3566666664 8888899999999 999999999987665543444568999999999999999765 6 8999
Q ss_pred cCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhCCC
Q 016073 269 EDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM-KPGVCWVDMHKLAEKIILESLKKGGV 347 (396)
Q Consensus 269 ~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~-kpG~~~~~v~~~~~~~~~~~l~~~g~ 347 (396)
++||+|++|+|+.|+||++|++|||++ |+++++|+++|+.+++++.++++.+ +||+++.+|++++++++.+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~------- 151 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWK------- 151 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH-------
Confidence 999999999999999999999999998 9999999999999999999999988 5899999999999999875
Q ss_pred ccCChHHHHHhhccccccccccccccC--CcccCCCCC--CCCCccccCCCC
Q 016073 348 MVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGY--PKVYMIKLTADG 395 (396)
Q Consensus 348 ~~~~~~~~~~~g~~~~~~~h~~GHgiG--l~~he~~~~--~~g~~~~~~~~~ 395 (396)
.|+ .|.|++||||| +++||.|.+ .+++..+|++.|
T Consensus 152 ----------~g~---~~~h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gm 190 (224)
T cd01085 152 ----------AGL---DYGHGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGM 190 (224)
T ss_pred ----------hCC---CCCCCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCC
Confidence 343 47899999999 799999987 688889998876
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=4.6e-32 Score=243.71 Aligned_cols=178 Identities=26% Similarity=0.420 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (396)
|+.||+|++++++++..+.+.++||+||.|+.+.+...+.+. |+ ..++++++++|+|+..+|+.+ +++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~-~~~~~~~v~~g~~~~~~h~~~----~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAA-GG-YPAGPTIVGSGARTALPHYRP----DDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CC-CCCCCcEEEECccccCcCCCC----CCCCcCCCC
Confidence 578999999999999999999999999999999999888875 65 577889999999999999764 788999999
Q ss_pred EEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 016073 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (396)
Q Consensus 273 ~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~ 352 (396)
+|++|+|+.|+||++|++||+++ |+++++++++|+.+.++++.+++.+|||+++.||++++++++.+
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~------------ 141 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEE------------ 141 (207)
T ss_pred EEEEEeceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999 99999999999999999999999999999999999999999886
Q ss_pred HHHHHhhccccccccccccccCCcccCCCCCCCCCccccCCCC
Q 016073 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKVYMIKLTADG 395 (396)
Q Consensus 353 ~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~g~~~~~~~~~ 395 (396)
.|+. .++.|++||+||+++||.|.+.++.+.+|++.|
T Consensus 142 -----~g~~-~~~~~~~Gh~iG~~~~e~~~~~~~~~~~l~~gm 178 (207)
T cd01066 142 -----HGLG-PNFGHRTGHGIGLEIHEPPVLKAGDDTVLEPGM 178 (207)
T ss_pred -----cCcc-ccCCCCCccccCcccCCCCCcCCCCCCCcCCCC
Confidence 4443 368899999999999999998888999998876
No 26
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.97 E-value=1.8e-30 Score=254.18 Aligned_cols=187 Identities=13% Similarity=0.095 Sum_probs=159.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---CCC-CCCCCcceeeeCCCccccccCCC
Q 016073 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGC-RHCSYTCICATGENSAVLHYGHA 260 (396)
Q Consensus 185 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~---~g~-~~~~~~~iv~sG~~~~~~h~~~~ 260 (396)
+..+|++||+.||+|++|+.++++.+.+.++||+|+.||+..++..+++. .|. ..++||++++ .|.+.+|+.+
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~vS--~N~~aaH~tP- 226 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGCS--LNHCAAHYTP- 226 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCceee--cCccccCCCC-
Confidence 34489999999999999999999999999999999999999887765432 244 3688988664 7888899876
Q ss_pred CCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016073 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (396)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 340 (396)
...++++|+.||+|.||+|+.++||++|++||+++ | ++++++++++.+|+++++++++||++++||++++++++++
T Consensus 227 ~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies 302 (470)
T PTZ00053 227 NTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIES 302 (470)
T ss_pred CCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 11236789999999999999999999999999988 5 6899999999999999999999999999999999999986
Q ss_pred HHHhCCCccCChHHHHHhhcc--ccc-----cccccccccCC-cccC---CCCCCCCCccccCCCC
Q 016073 341 SLKKGGVMVGNVDEMMAARLG--AVF-----MPHGLGHFLGI-DTHD---PGGYPKVYMIKLTADG 395 (396)
Q Consensus 341 ~l~~~g~~~~~~~~~~~~g~~--~~~-----~~h~~GHgiGl-~~he---~~~~~~g~~~~~~~~~ 395 (396)
.|++ ..+ +.|.+||+||+ .+|+ .|.+..++.++|++.+
T Consensus 303 -----------------~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGm 351 (470)
T PTZ00053 303 -----------------YEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGE 351 (470)
T ss_pred -----------------cCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCC
Confidence 3431 113 37999999997 9998 7777788889988876
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.97 E-value=1.1e-29 Score=232.36 Aligned_cols=169 Identities=17% Similarity=0.212 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---------cCCCCCCCCcceeeeCCCccccccCCCCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---------YGGCRHCSYTCICATGENSAVLHYGHAAAP 263 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~---------~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p 263 (396)
++.||+|++|++++++.+.+.++||+||.||....+..+.. ..|....+|+++++ .|+..+|+.+...+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 36899999999999999999999999999997665555543 14566788888887 48888998642124
Q ss_pred CCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCH-----HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 016073 264 NDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTS-----DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (396)
Q Consensus 264 ~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~-----~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 338 (396)
++++|++||+|++|+|+.|+||++|+||||++ |++++ +++++|++++++++++++++|||++++||++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78899999999999999999999999999999 88875 8999999999999999999999999999999999998
Q ss_pred HHHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCC
Q 016073 339 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPG 381 (396)
Q Consensus 339 ~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~ 381 (396)
.+ .|+ ..+.+ ++.|++|| |+..|+.+
T Consensus 158 ~~----~G~----------~~~~~-~~~h~~g~--~~~~~~~~ 183 (228)
T cd01089 158 VD----YGC----------TPVEG-VLSHQLKR--VVSSGEGK 183 (228)
T ss_pred HH----cCC----------EEecC-ccccCcCc--eEecCCCC
Confidence 86 332 11554 88999999 55666644
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.97 E-value=3.1e-29 Score=236.90 Aligned_cols=178 Identities=19% Similarity=0.245 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCccc
Q 016073 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFE 269 (396)
Q Consensus 190 ~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~ 269 (396)
-+||+.||+|++|++++++.+.+.++||++|.||++.++..+.+. |+. .+||++++ .|...+||.+ ..++++.|+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~-g~~-~aFp~~vs--~n~~~~H~~p-~~~d~~~l~ 76 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIREL-GAE-PAFPCNIS--INECAAHFTP-KAGDKTVFK 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCC-CCCCccee--cCCEeeCCCC-CCCcCccCC
Confidence 478999999999999999999999999999999999998888875 654 78998887 4667789876 223367899
Q ss_pred CCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCcc
Q 016073 270 DGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMV 349 (396)
Q Consensus 270 ~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~ 349 (396)
+||+|.+|+|+.++||++|++||+++ |. .++++|+++.+|++++++++|||++++||++++++++++
T Consensus 77 ~GDvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~--------- 143 (295)
T TIGR00501 77 DGDVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIES--------- 143 (295)
T ss_pred CCCEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH---------
Confidence 99999999999999999999999998 64 378999999999999999999999999999999999986
Q ss_pred CChHHHHHhhccccccccccccccC-CcccCC---CCCCCCCccccCCCC
Q 016073 350 GNVDEMMAARLGAVFMPHGLGHFLG-IDTHDP---GGYPKVYMIKLTADG 395 (396)
Q Consensus 350 ~~~~~~~~~g~~~~~~~h~~GHgiG-l~~he~---~~~~~g~~~~~~~~~ 395 (396)
.|+.. +.|.+||+|| +.+|+. |.+..++..+|++++
T Consensus 144 --------~G~~~--i~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~Gm 183 (295)
T TIGR00501 144 --------YGVKP--ISNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGD 183 (295)
T ss_pred --------cCCee--ecCCCCcceecccccCCCccCeecCCCCCEeCCCC
Confidence 55553 4799999999 688985 566678888898876
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.97 E-value=5.9e-29 Score=234.92 Aligned_cols=176 Identities=23% Similarity=0.300 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCC
Q 016073 192 ELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDG 271 (396)
Q Consensus 192 Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~G 271 (396)
+|+.||+|++|++++++.+.+.++||+||.||++.++..+.+. |. ..+|+++++.|.+ .+||.+ ...+++.|++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~-g~-~~afp~~vs~n~~--~~H~~p-~~~d~~~l~~G 75 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIREL-GA-KPAFPCNISINEV--AAHYTP-SPGDERVFPEG 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CC-ccCCCCEEeeCCC--ccCCCC-CCCCCcccCCC
Confidence 5899999999999999999999999999999999999888875 54 5889988887554 579875 22236789999
Q ss_pred CEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCC
Q 016073 272 DMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGN 351 (396)
Q Consensus 272 d~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~ 351 (396)
|+|.+|+|+.|+||++|++||+++ | ++++++++++.++++++++++|||++++||++++++++++
T Consensus 76 DvV~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~----------- 140 (291)
T PRK08671 76 DVVKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRS----------- 140 (291)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-----------
Confidence 999999999999999999999998 6 4789999999999999999999999999999999999886
Q ss_pred hHHHHHhhccccccccccccccCC-cccCCCCC---CCCCccccCCCC
Q 016073 352 VDEMMAARLGAVFMPHGLGHFLGI-DTHDPGGY---PKVYMIKLTADG 395 (396)
Q Consensus 352 ~~~~~~~g~~~~~~~h~~GHgiGl-~~he~~~~---~~g~~~~~~~~~ 395 (396)
.|+.. +.|.+||+||+ .+||.|.+ ..+++.+|+++|
T Consensus 141 ------~G~~~--~~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~Gm 180 (291)
T PRK08671 141 ------YGFKP--IRNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGD 180 (291)
T ss_pred ------cCCcc--cCCCcccCcCCCcccCCCccCccCCCCCceeCCCC
Confidence 45543 56889999996 89998775 467788888875
No 30
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.96 E-value=6.3e-28 Score=235.02 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=150.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---------CCCCCCCCcceeeeCCCcccc
Q 016073 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---------GGCRHCSYTCICATGENSAVL 255 (396)
Q Consensus 185 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~---------~g~~~~~~~~iv~sG~~~~~~ 255 (396)
-.+|+++||+.||+|++|+.++++.+.+.++||+|+.||+...+..+..+ .+..+++|+++|+ .|...+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 46899999999999999999999999999999999999998776666542 2345688988876 788999
Q ss_pred ccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Q 016073 256 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDM 330 (396)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v 330 (396)
||.+....+++.|++||+|.||+|+.++||++|++||++| |+ ++++++++++++++|++++++.+|||++++||
T Consensus 89 H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI 167 (389)
T TIGR00495 89 HFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQV 167 (389)
T ss_pred CCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9875101124789999999999999999999999999999 64 57889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcccC-CCC
Q 016073 331 HKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD-PGG 382 (396)
Q Consensus 331 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he-~~~ 382 (396)
++++++++++ +|+. -..+-+||+||-.+|| .|.
T Consensus 168 ~~ai~~v~~~-----------------~G~~--~v~~~~gH~igr~~~~g~~~ 201 (389)
T TIGR00495 168 TEAINKVAHS-----------------YGCT--PVEGMLSHQLKQHVIDGEKV 201 (389)
T ss_pred HHHHHHHHHH-----------------cCCe--ecCCceeecccceeccCCCe
Confidence 9999999986 4443 2456689999999998 555
No 31
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.96 E-value=4.7e-28 Score=228.75 Aligned_cols=175 Identities=18% Similarity=0.202 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCCCCCcccCCC
Q 016073 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (396)
Q Consensus 193 i~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (396)
++.||+|++|++++++++.+.++||+||.||++.++..+.+. |. .++|++++ +.|...+||.+ ...++++|++||
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~-G~-~~afp~~i--s~n~~~~H~~p-~~~d~~~l~~GD 75 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIREL-GA-GPAFPVNL--SINECAAHYTP-NAGDDTVLKEGD 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc-CC-CCCCCcee--ccCCEeeCCCC-CCCCCcccCCCC
Confidence 368999999999999999999999999999999999888775 54 57888664 46778899876 222357899999
Q ss_pred EEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 016073 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (396)
Q Consensus 273 ~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~ 352 (396)
+|.+|+|+.++||++|++||+++ |+ +++++++++++|++++++++|||++++||++++++++++
T Consensus 76 vV~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~------------ 139 (291)
T cd01088 76 VVKLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIES------------ 139 (291)
T ss_pred EEEEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH------------
Confidence 99999999999999999999998 63 888999999999999999999999999999999999986
Q ss_pred HHHHHhhccccccccccccccC-CcccCCC---CCCCCCccccCCCC
Q 016073 353 DEMMAARLGAVFMPHGLGHFLG-IDTHDPG---GYPKVYMIKLTADG 395 (396)
Q Consensus 353 ~~~~~~g~~~~~~~h~~GHgiG-l~~he~~---~~~~g~~~~~~~~~ 395 (396)
.|+.. ..|.+||+|| +.+|+.+ .+..+.+.+|+++|
T Consensus 140 -----~G~~~--~~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gm 179 (291)
T cd01088 140 -----YGFKP--IRNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGD 179 (291)
T ss_pred -----cCCEE--eecCCccCccCccccCCCccCccCCCCCCEeCCCC
Confidence 55553 4789999999 5899874 45677788888875
No 32
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.95 E-value=1.4e-27 Score=235.84 Aligned_cols=305 Identities=14% Similarity=0.149 Sum_probs=211.7
Q ss_pred CccccccCCCc-eeecCCCCCCEEEEEEecCCeEEEEecCCCCCcccccccCC-ChhHHHHHhCCc-ccc----ch-hhH
Q 016073 58 HLELFRQESYF-AYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIK-PLSYFQEKYMVN-MVY----YT-DEI 129 (396)
Q Consensus 58 ~~~~f~~~~n~-~YLtG~~~~~~~lvi~~~~g~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~----~~-~~~ 129 (396)
...||+..+.+ .||.||++|++++++.+ +..++++++..+..-....... +.+..+ .+. .++ .. ..+
T Consensus 9 dd~~Y~KssAL~~WLlGYEfpdTilv~~~--~~i~iltSkkKa~~l~~~~~~~~~~~~~~---~v~llvR~k~d~n~~~f 83 (960)
T KOG1189|consen 9 DDNPYQKSSALFTWLLGYEFPDTILVLCK--DKIYILTSKKKAEFLQKVTNLAQSSEGKP---TVNLLVRDKNDDNKGLF 83 (960)
T ss_pred cccchhHHHHHHHHHhccccCceEEEEec--CcEEEEecchhHHHHHhhcccccCcccCc---ceEEEecccCccccccH
Confidence 34556666654 59999999999988864 3677777765443211100000 000000 000 001 11 113
Q ss_pred HHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhccccccccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Q 016073 130 VGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVE 209 (396)
Q Consensus 130 ~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~ 209 (396)
.+++. .++. .+++||+... +...+.|+ ..+-..+.+.+++.+|++..+..+-+||++.||+.+|+|+.++...|..
T Consensus 84 dkii~-~ik~-~gk~vGvf~k-e~~~G~F~-~~W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k 159 (960)
T KOG1189|consen 84 DKIIK-AIKS-AGKKVGVFAK-EKFQGEFM-ESWNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNK 159 (960)
T ss_pred HHHHH-HHHh-cCCeeeeecc-cccchhHH-HHHHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHH
Confidence 33332 2222 4678887643 33333332 2333445544677889999999999999999999999999999999984
Q ss_pred HH-----HHccCC--CcHHHHHHHHHHHHHHc---CCC----CCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEE
Q 016073 210 VM-----KKTRVG--MKEYQMESMFLHHTYMY---GGC----RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMAL 275 (396)
Q Consensus 210 ~~-----~~i~~G--~sE~ei~~~~~~~~~~~---~g~----~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~ 275 (396)
.+ ..+..+ +++..+...++..+... .|. -.++|+||++||.+...-. + +.+++..| + +|+
T Consensus 160 ~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~-s--a~s~~~~L--~-~I~ 233 (960)
T KOG1189|consen 160 YLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKP-S--AVSDDNHL--H-VIL 233 (960)
T ss_pred HHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCcccccc-c--cccccccc--c-eEE
Confidence 43 445554 67777777766665421 111 3589999999999887521 1 34567777 4 999
Q ss_pred EEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHH
Q 016073 276 LDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEM 355 (396)
Q Consensus 276 iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~ 355 (396)
+.+|++|++||++++||+.| .|+.+|++.|+.++.+|.++++.+|||++.++||.++..++.+.-+
T Consensus 234 cs~G~RynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~P------------ 299 (960)
T KOG1189|consen 234 CSLGIRYNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKP------------ 299 (960)
T ss_pred eeccchhhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCc------------
Confidence 99999999999999999999 8999999999999999999999999999999999999999986311
Q ss_pred HHhhccccccccccccccCCcccCCCCC-CCCCccccCCCC
Q 016073 356 MAARLGAVFMPHGLGHFLGIDTHDPGGY-PKVYMIKLTADG 395 (396)
Q Consensus 356 ~~~g~~~~~~~h~~GHgiGl~~he~~~~-~~g~~~~~~~~~ 395 (396)
.+.+ .|+..+|.||||+++|...+ .+-++.+|+..|
T Consensus 300 ---el~~-~~~k~lG~~iGlEFREssl~inaKnd~~lk~gm 336 (960)
T KOG1189|consen 300 ---ELVP-NFTKNLGFGIGLEFRESSLVINAKNDRVLKKGM 336 (960)
T ss_pred ---chhh-hhhhhcccccceeeecccccccccchhhhccCc
Confidence 1343 57888999999999998764 355667777654
No 33
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=5.6e-26 Score=205.86 Aligned_cols=184 Identities=22% Similarity=0.327 Sum_probs=153.6
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc------CCCCCCCCcceeeeCCCccccccCCC
Q 016073 187 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY------GGCRHCSYTCICATGENSAVLHYGHA 260 (396)
Q Consensus 187 vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~------~g~~~~~~~~iv~sG~~~~~~h~~~~ 260 (396)
+|+++||+.||+|++|+.++++.+.+.++||+|..||....++.+.++ .|...++|+ ++.| -|-..+|+.+
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~-~ciS-vNe~v~HgiP- 81 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFP-TCIS-VNEVVAHGIP- 81 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcc-eEee-hhheeeecCC-
Confidence 899999999999999999999999999999999999999888888752 233444554 3333 7888999876
Q ss_pred CCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCC-HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016073 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFT-SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (396)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~-~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~ 339 (396)
. .+++|++||+|.||+|+.++||++|.++|+.| |+.+ +..+++.+++.++..++++.+|||++..+|-++++++++
T Consensus 82 ~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~ 158 (255)
T COG0024 82 G--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAE 158 (255)
T ss_pred C--CCcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 1 46789999999999999999999999999999 8555 477779999999999999999999999999999999987
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCCC-C---CccccCCCC
Q 016073 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPK-V---YMIKLTADG 395 (396)
Q Consensus 340 ~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~~-g---~~~~~~~~~ 395 (396)
. .| +. -...-+|||||..+||.|.++. + ...+|++.|
T Consensus 159 ~----~G-------------~~--vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gm 199 (255)
T COG0024 159 S----RG-------------FS--VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGM 199 (255)
T ss_pred H----cC-------------CE--EeecccCCccCcccCCCCeeccccCCCCCcccCCCC
Confidence 4 33 32 1233479999999999998773 2 346777765
No 34
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=2.7e-24 Score=192.75 Aligned_cols=175 Identities=18% Similarity=0.247 Sum_probs=154.6
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-----CCCCCcceeeeCCCccccccCC
Q 016073 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC-----RHCSYTCICATGENSAVLHYGH 259 (396)
Q Consensus 185 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~-----~~~~~~~iv~sG~~~~~~h~~~ 259 (396)
--|.+++||+.||+|++++.+.+..+...++||+|..||......++.++ |+ .+..||--+....|-.++|
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ier-g~YPSPLnYy~FPKS~CTSVNEviCH--- 189 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIER-GAYPSPLNYYGFPKSVCTSVNEVICH--- 189 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhc-CCcCCCcccCCCchhhhcchhheeec---
Confidence 35789999999999999999999999999999999999999999999886 43 3456665556668999999
Q ss_pred CCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 016073 260 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (396)
Q Consensus 260 ~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~ 339 (396)
+.|..|+|++||+|.||+..-++||++|..+||+| |+++++.+++.+..+++.+.+|+.+|||+++.+|...+++...
T Consensus 190 -GIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~ 267 (369)
T KOG2738|consen 190 -GIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHAT 267 (369)
T ss_pred -CCCCcCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999 9999999999999999999999999999999999999998876
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCCcccCCCCCC
Q 016073 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYP 384 (396)
Q Consensus 340 ~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~he~~~~~ 384 (396)
+ +|+. ...--+|||||--+|-.|.+.
T Consensus 268 ~-----------------~g~s--VVr~ycGHGig~~FH~~Pnip 293 (369)
T KOG2738|consen 268 K-----------------NGYS--VVRSYCGHGIGRVFHCAPNIP 293 (369)
T ss_pred h-----------------cCce--eehhhhccccccccccCCCch
Confidence 5 3332 223337999999999888765
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.92 E-value=8.8e-24 Score=206.56 Aligned_cols=183 Identities=27% Similarity=0.339 Sum_probs=158.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc----cCC--CcHHHHHHHHHHHHHHcCCCCCCCCcceeee-CC
Q 016073 178 HPILSECRVFKSDHELALIQFANDISSEAHVEVMKKT----RVG--MKEYQMESMFLHHTYMYGGCRHCSYTCICAT-GE 250 (396)
Q Consensus 178 ~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i----~~G--~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~s-G~ 250 (396)
...|..++++|++.|++.||.+----..|+.+.+..+ ..| ++|.+++..++..-.++.+..+.+|++|.++ |+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~ 377 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGP 377 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCCC
Confidence 4457799999999999999988766666666665544 456 8999999999888777667788999999977 99
Q ss_pred CccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCHHH
Q 016073 251 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKP-GVCWVD 329 (396)
Q Consensus 251 ~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~ 329 (396)
|++++||.+ ..-+++.+.+..+.++|-|++|.--.+|+|||+.. |+||+++++.|..|++.+.+...++-| |..+..
T Consensus 378 NgAviHYsP-~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 378 NGAVIHYSP-PAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CceeeecCC-CccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 999999987 33356789999999999999999999999999998 999999999999999999999999888 889999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--CcccCCCC
Q 016073 330 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGG 382 (396)
Q Consensus 330 v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiG--l~~he~~~ 382 (396)
++..+|..+.+ .|+ .+.|++||||| |.|||.|.
T Consensus 456 lD~laR~~LW~-----------------~gL---Dy~HgTGHGVG~fLnVhE~P~ 490 (606)
T KOG2413|consen 456 LDALARSALWK-----------------AGL---DYGHGTGHGVGSFLNVHEGPI 490 (606)
T ss_pred hHHHHHHHHHh-----------------hcc---ccCCCCCcccccceEeccCCc
Confidence 99999988875 233 58899999999 99999985
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.91 E-value=3e-23 Score=201.55 Aligned_cols=341 Identities=16% Similarity=0.134 Sum_probs=223.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCc-eeecCCCCCCEEEEEEecCC
Q 016073 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF-AYLFGVREPGFYGAIDIATG 88 (396)
Q Consensus 10 ~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~-~YLtG~~~~~~~lvi~~~~g 88 (396)
..|+.+.|.+|..-|+..|.+. ..++++++|+.|. .+...||+.++.+ .||.||++|.+++++. ++
T Consensus 4 ~~ide~~F~kR~~~l~~~~ne~----dG~p~sllv~lG~-------s~d~npyqk~taLh~wLLgYEFP~Tli~l~--~~ 70 (1001)
T COG5406 4 IRIDEERFEKRSRDLRKHLNEE----DGGPDSLLVMLGK-------SQDVNPYQKNTALHIWLLGYEFPETLIILD--DV 70 (1001)
T ss_pred ccccHHHHHHHHHHHHHhhhhc----cCCCceEEEEecc-------ccccChhhhhhHHHHHHHhccCcceEEEEe--cc
Confidence 4678889999999999999763 3357889999885 3445678777665 4999999999877664 34
Q ss_pred eEEEEecCCCCCccc---cc--ccCCChhHHHHHhCCccccchhhHHHHHHh---cccCCCCCEEEEecCCCCCCcCCC-
Q 016073 89 KSILFAPRLPPDYAV---WL--GKIKPLSYFQEKYMVNMVYYTDEIVGVLQG---HYKEPGKPLLFLLHGLNTDSNNFS- 159 (396)
Q Consensus 89 ~~~l~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~i~~~~g~~~~~~~~~- 159 (396)
..++.+....+...+ .. ..+.....|. ....++...+++.. .++. .++.||+... +.-.+.+.
T Consensus 71 ~~~I~ts~~kA~~lqk~l~~~~~~~v~~n~~~------r~k~~eenkKlF~~~i~~i~s-~~k~VG~f~k-D~~qgkfi~ 142 (1001)
T COG5406 71 CTAITTSKKKAILLQKGLAETSLNIVVRNKDN------RTKNMEENKKLFKGSIYVIGS-ENKIVGDFCK-DVLQGKFIN 142 (1001)
T ss_pred eEEEEechhhHHHHHhhhccCcchhhhhhhhh------cccCHHHHHHHHhhhheeccc-CCcccCccch-hhhhccccc
Confidence 556655543322110 00 0111111111 11122222232222 2221 2345543211 11112221
Q ss_pred -chhhhhccccccccccChHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH---HccCC---CcHHHHHHHHHHHH-
Q 016073 160 -KPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMK---KTRVG---MKEYQMESMFLHHT- 231 (396)
Q Consensus 160 -~~~~~~~l~~~~~~~~~~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~---~i~~G---~sE~ei~~~~~~~~- 231 (396)
|-..++..+. ..+.+|++.-+.++-.+|+.+||+.+|-+++.++..|....+ .+-.| +|+..+...+...+
T Consensus 143 ew~~i~e~vk~-efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~id 221 (1001)
T COG5406 143 EWDSIFEPVKS-EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLID 221 (1001)
T ss_pred ccchhhhhhhh-hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcc
Confidence 2222333322 356778888999999999999999999999999999884432 22222 34444444333321
Q ss_pred ---H-H----cCCC-----CCCCCcceeeeCCCccccccCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCC
Q 016073 232 ---Y-M----YGGC-----RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK 298 (396)
Q Consensus 232 ---~-~----~~g~-----~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~ 298 (396)
. + +.|. -.|+|.||++||....+-- + ..+.+..+ -||+|++.+|.+|+|||++++||+.. +
T Consensus 222 dv~f~q~~s~~l~~~~~d~lew~ytpiiqsg~~~Dl~p-s--a~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~--d 295 (1001)
T COG5406 222 DVEFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSIDLTP-S--AFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT--D 295 (1001)
T ss_pred hhhhhhhcCccccccchhhhhhhcchhhccCceeeccc-c--cccCchhh-cCceEEEEeeeeeccccccccceEEe--C
Confidence 1 1 0111 2489999999998765411 1 22344444 47899999999999999999999987 8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCccc
Q 016073 299 FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTH 378 (396)
Q Consensus 299 ~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~h 378 (396)
|+.+|++-|+.++.+|+..+..+|||.+.++||..+..+|...-. .++. .|...+|-+||++++
T Consensus 296 p~~e~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~p---------------el~p-nF~~nvG~~igiefR 359 (1001)
T COG5406 296 PDSEQQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGP---------------ELGP-NFIYNVGLMIGIEFR 359 (1001)
T ss_pred CchHhhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCC---------------ccCc-hHhhhhhhhcccccc
Confidence 999999999999999999999999999999999999999876312 2443 688899999999999
Q ss_pred CCCCCC-CCCccccCCC
Q 016073 379 DPGGYP-KVYMIKLTAD 394 (396)
Q Consensus 379 e~~~~~-~g~~~~~~~~ 394 (396)
+...+. .-++++||+-
T Consensus 360 ~s~~~~nvkn~r~lq~g 376 (1001)
T COG5406 360 SSQKPFNVKNGRVLQAG 376 (1001)
T ss_pred ccccceeccCCceeccc
Confidence 976644 3344777753
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.83 E-value=5.2e-21 Score=159.63 Aligned_cols=124 Identities=36% Similarity=0.531 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCCCCCCEEEEE-EecCCeE
Q 016073 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI-DIATGKS 90 (396)
Q Consensus 12 ~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~~~~~~~lvi-~~~~g~~ 90 (396)
+|+++|++||++|.+.|++ ++++|+.|+++..++ .|..|+|||++||+||||+++|++++++ ....++.
T Consensus 1 i~~~~~~~RR~~l~~~l~~---------~~~vil~~~~~~~~~-~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~ 70 (134)
T PF05195_consen 1 IPAEEYAERRKKLAEKLPD---------NSIVILPGGPEKYRS-NDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKS 70 (134)
T ss_dssp -EHHHHHHHHHHHHHHSHS---------SEEEEEE----EEEE-TTEEE-----HHHHHHH---STT-EEEEEECTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCC---------CcEEEEECCCeeeec-CCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeE
Confidence 5789999999999999987 389999999999998 9999999999999999999999999988 5555799
Q ss_pred EEEecCCCCCcccccccCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEE
Q 016073 91 ILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFL 147 (396)
Q Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 147 (396)
+||+|+.+...+.|.|.+.+.+++.+.+|++.+.+.+++.+.|.+++.. ...+++
T Consensus 71 ~LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~--~~~~~~ 125 (134)
T PF05195_consen 71 TLFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKR--SRTVYY 125 (134)
T ss_dssp EEEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTT--TSCEEE
T ss_pred EEEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcC--CCEEEE
Confidence 9999999999999999999999999999999999999999999988753 333544
No 38
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.41 E-value=5.3e-12 Score=116.98 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=126.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcC---------CCCCCCCcceeeeCCCccccc
Q 016073 186 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG---------GCRHCSYTCICATGENSAVLH 256 (396)
Q Consensus 186 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~---------g~~~~~~~~iv~sG~~~~~~h 256 (396)
.|-++.-+..+|-|++|+.++++.+.+.+.+|.+-.||+..-...++++. -..+.+||+.++ .|.+.+|
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is--vnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS--VNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--ccceeec
Confidence 34566778899999999999999999999999999999865444443211 124589998887 6788899
Q ss_pred cCCCCCCCCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 016073 257 YGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMH 331 (396)
Q Consensus 257 ~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~ 331 (396)
|.+.....+..|++||+|.||+|+..+||.+.++.|++| +. .+-...++..+++-|.++++..+|||.+-..|-
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 987222225789999999999999999999999999999 53 345788999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 016073 332 KLAEKIILE 340 (396)
Q Consensus 332 ~~~~~~~~~ 340 (396)
+++.++++.
T Consensus 171 ~~i~k~aas 179 (398)
T KOG2776|consen 171 RAIVKTAAS 179 (398)
T ss_pred HHHHHHHHH
Confidence 999999875
No 39
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.32 E-value=3.5e-11 Score=108.85 Aligned_cols=191 Identities=14% Similarity=0.111 Sum_probs=147.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH---HcCC-CCCCCCcceeeeCCCccccccCCCCCC
Q 016073 188 KSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTY---MYGG-CRHCSYTCICATGENSAVLHYGHAAAP 263 (396)
Q Consensus 188 Ks~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~---~~~g-~~~~~~~~iv~sG~~~~~~h~~~~~~p 263 (396)
-..+...-+|+|+++..++-..+...|+|||+-.||...++...+ .++| ..+.+||+-++ -|.+..||++ +.-
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTp-NaG 156 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTP-NAG 156 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCC-CCC
Confidence 344556788999999999999999999999999999998887754 2233 23578886655 6778899987 333
Q ss_pred CCCcccCCCEEEEEeCeeeCceeeeeeeeEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Q 016073 264 NDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLK 343 (396)
Q Consensus 264 ~~~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~ 343 (396)
...+|+.+|+..||+|...+|-..|.+-|+.. ++....+..++.+|...+++..--.++..||.++++++++.+-.
T Consensus 157 d~tVLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEv 232 (397)
T KOG2775|consen 157 DKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEV 232 (397)
T ss_pred CceeeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEE
Confidence 34578999999999999999999999999865 45666799999999999999999999999999999999987533
Q ss_pred hCCCccCChHHHHHhhccccccccccccccC-CcccC---CCCCCCCCccccCCCC
Q 016073 344 KGGVMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHD---PGGYPKVYMIKLTADG 395 (396)
Q Consensus 344 ~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiG-l~~he---~~~~~~g~~~~~~~~~ 395 (396)
+.+ |.. +.+ +-...-.||+|+ ..+|- .|.+..|+.++.+++-
T Consensus 233 Ei~---Gk~-----~~V--KpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e 278 (397)
T KOG2775|consen 233 EIN---GKT-----YQV--KPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGE 278 (397)
T ss_pred EeC---Cce-----ecc--eeccccCCCcccceEeecCcccceecCCcceeecCCe
Confidence 332 110 000 012223689998 67775 6666688999888764
No 40
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=98.81 E-value=3.7e-09 Score=87.74 Aligned_cols=123 Identities=15% Similarity=0.175 Sum_probs=78.0
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCceeecCC---CCCCEEEEEEecCCeEEEEecC
Q 016073 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGV---REPGFYGAIDIATGKSILFAPR 96 (396)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~~YLtG~---~~~~~~lvi~~~~g~~~l~~~~ 96 (396)
|++++++.|++. |+ |++ |+. .+.|++||||+ ....+++++.+.++. +++++.
T Consensus 1 Rl~rl~~~m~~~----gi--d~l-ll~-----------------~~~ni~YltG~~~~~~~~~~~l~i~~~~~-~l~~~~ 55 (132)
T PF01321_consen 1 RLERLRAAMAEA----GI--DAL-LLT-----------------SPENIRYLTGFRWQPGERPVLLVITADGA-VLFVPK 55 (132)
T ss_dssp HHHHHHHHHHHT----T---SEE-EEE-----------------SHHHHHHHHS--ST-TSSEEEEEEESSSE-EEEEEG
T ss_pred CHHHHHHHHHHC----CC--CEE-EEc-----------------ChhhceEecCCCcCCCcceEEEEecccCc-EEEecc
Confidence 899999999995 66 455 553 35689999999 555566665577777 999986
Q ss_pred CCCCccc----ccccCCChhHHHHHhCCccccchhhHHHHHHhcccCCCCCEEEEecCCCCCCcCCCchhhhhcccc-c-
Q 016073 97 LPPDYAV----WLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEK-F- 170 (396)
Q Consensus 97 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~-~- 170 (396)
.+..... +...+..+.+ +.+.+.+.|++.+. ..++|+++.. .++...+..|++ +
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~-----------~~~~~~~~l~~~~~--~~~~igve~~-------~~~~~~~~~l~~~~~ 115 (132)
T PF01321_consen 56 GEYERAAEESAPDDEVVEYED-----------PYEAIAEALKKLGP--EGKRIGVEPD-------SLSAAEYQRLQEALP 115 (132)
T ss_dssp GGHHHHHHHHTTSSEEEEEST-----------HHHHHHHHHHHHTT--TTSEEEEETT-------TSBHHHHHHHHHHST
T ss_pred ccHHHHHHhhcCCceEEEEec-----------ccchHHHHHHHhCC--CCCEEEEcCC-------cChHHHHHHHHHhCC
Confidence 5443211 1111111110 24567888887753 3488977543 134555666644 2
Q ss_pred cccccChHHHHHHHHhc
Q 016073 171 ETELNTLHPILSECRVF 187 (396)
Q Consensus 171 ~~~~~~~~~~i~~~R~v 187 (396)
+.+++++++.|.++|+|
T Consensus 116 ~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 116 GAEFVDASPLIEELRMI 132 (132)
T ss_dssp TSEEEEEHHHHHHHHTS
T ss_pred CCEEEEcHHHHHHcCcC
Confidence 46889999999999987
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=98.23 E-value=1.3e-06 Score=75.12 Aligned_cols=79 Identities=14% Similarity=0.236 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCCc-eeecCCCCCCEEEEEEecCCeE
Q 016073 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF-AYLFGVREPGFYGAIDIATGKS 90 (396)
Q Consensus 12 ~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n~-~YLtG~~~~~~~lvi~~~~g~~ 90 (396)
|+.+.|.+|+++|++.|++...+.+.+.|+++|+.|.. .+| .+|.....+ .||+||++|+++++|++. +.
T Consensus 1 iD~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~-----~e~--~~Y~Ks~aLq~WLlGYEfpdTiiv~tk~--~i 71 (163)
T PF14826_consen 1 IDKETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKA-----DED--NPYSKSTALQTWLLGYEFPDTIIVFTKK--KI 71 (163)
T ss_dssp --HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S-------TT--STT-HHHHHHHHHHSS--SSEEEEEETT--EE
T ss_pred CCHHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCc-----ccC--ccchhHHHHHHHHhcccHhhhhhhhcCC--EE
Confidence 57889999999999999986332234568898888852 233 444455444 599999999999999764 78
Q ss_pred EEEecCCCC
Q 016073 91 ILFAPRLPP 99 (396)
Q Consensus 91 ~l~~~~~~~ 99 (396)
++++++..+
T Consensus 72 ~~ltS~KKa 80 (163)
T PF14826_consen 72 HFLTSKKKA 80 (163)
T ss_dssp EEEEEHHHH
T ss_pred EEEeCHHHH
Confidence 888876543
No 42
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=93.34 E-value=1.4 Score=38.71 Aligned_cols=99 Identities=15% Similarity=0.086 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCC-CCCCCCcccCCC
Q 016073 194 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA-AAPNDRTFEDGD 272 (396)
Q Consensus 194 ~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~-~~p~~~~l~~Gd 272 (396)
..++++.+.+..++..+++.++||++-.||...+...+.+. |... .+...++-|-.-. .|..+. ...++.+|++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~-g~~~-~~~~~~Gh~iG~~-~~e~~~~~~~~~~~l~~gm 178 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEH-GLGP-NFGHRTGHGIGLE-IHEPPVLKAGDDTVLEPGM 178 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-Cccc-cCCCCCccccCcc-cCCCCCcCCCCCCCcCCCC
Confidence 46788899999999999999999999999999888777664 5421 1111121111111 121110 012457899999
Q ss_pred EEEEEeCeeeC-ceeeeeeeeEee
Q 016073 273 MALLDMGAEYQ-FYGSDITCSFPV 295 (396)
Q Consensus 273 ~v~iD~g~~~~-gY~aD~tRT~~v 295 (396)
++.++.+.... ++..-+.-|+.|
T Consensus 179 v~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 179 VFAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEEECCEEEECCCcEEEeeeEEEE
Confidence 99999998776 588888888887
No 43
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.34 E-value=0.21 Score=46.43 Aligned_cols=59 Identities=14% Similarity=0.173 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccc
Q 016073 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHF 372 (396)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHg 372 (396)
.++.+-+...+..+.+..++|||++..||++++++.+-+ .|--+ +.++...||.++.-+
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ie----rg~YP--------SPLnYy~FPKS~CTS 182 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIE----RGAYP--------SPLNYYGFPKSVCTS 182 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHh----cCCcC--------CCcccCCCchhhhcc
Confidence 356677777888999999999999999999999988764 33222 223334688885433
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=90.77 E-value=3.2 Score=38.16 Aligned_cols=95 Identities=12% Similarity=0.145 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCC----ccccccCCCCCCCCCccc
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGEN----SAVLHYGHAAAPNDRTFE 269 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~----~~~~h~~~~~~p~~~~l~ 269 (396)
.|++.+++.++...+++.++||++-.||...+...+.+. |.... ...++ .|.. ..++++.. ..++.+|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~-g~~~~--~~~~GHgiG~~~~e~p~~~~~~~--~~~~~~le 194 (252)
T PRK05716 120 DKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE-GFSVV--REYCGHGIGRKFHEEPQIPHYGA--PGDGPVLK 194 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCeee--cCccccccCCccCCCCccCcCCC--CCCCCEec
Confidence 466677788888899999999999999999888777664 54321 00111 1111 01111110 12467899
Q ss_pred CCCEEEEEeCeee------------------CceeeeeeeeEee
Q 016073 270 DGDMALLDMGAEY------------------QFYGSDITCSFPV 295 (396)
Q Consensus 270 ~Gd~v~iD~g~~~------------------~gY~aD~tRT~~v 295 (396)
+|.++.++-+... .++..-+.-|+.|
T Consensus 195 ~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~V 238 (252)
T PRK05716 195 EGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238 (252)
T ss_pred CCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEE
Confidence 9999999987643 3466667788877
No 45
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=90.64 E-value=3.6 Score=37.71 Aligned_cols=95 Identities=8% Similarity=0.156 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCC----ccccccCCCCCCCCCccc
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGEN----SAVLHYGHAAAPNDRTFE 269 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~----~~~~h~~~~~~p~~~~l~ 269 (396)
++++.+++.++++.+++.++||++-.|+...+...+.+. |.... ...++ .|-. ..++.+.. ..++.+|+
T Consensus 118 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-g~~~~--~~~~GHgiG~~~~e~p~i~~~~~--~~~~~~l~ 192 (247)
T TIGR00500 118 AEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAK-GFSVV--REYCGHGIGRKFHEEPQIPNYGK--KFTNVRLK 192 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEec--cCccCCccCcccCCCCccCCcCc--CCCCCEec
Confidence 456777788888889999999999999998888776653 54321 11111 1111 01111110 11367899
Q ss_pred CCCEEEEEeCeee------------------CceeeeeeeeEee
Q 016073 270 DGDMALLDMGAEY------------------QFYGSDITCSFPV 295 (396)
Q Consensus 270 ~Gd~v~iD~g~~~------------------~gY~aD~tRT~~v 295 (396)
+|.++.++-+... .++..-+.-|+.|
T Consensus 193 ~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~V 236 (247)
T TIGR00500 193 EGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVI 236 (247)
T ss_pred CCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEE
Confidence 9999999987643 2456667778877
No 46
>PRK08671 methionine aminopeptidase; Provisional
Probab=90.24 E-value=5.7 Score=37.60 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCC----CCCCCCcccCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----AAPNDRTFEDG 271 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~~p~~~~l~~G 271 (396)
.+++.+.+..+++.+++.++||++-.||.+.+...+.+ .|+... ....+-|-.-...|-.+. ...++.+|++|
T Consensus 103 ~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~-~G~~~~--~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~G 179 (291)
T PRK08671 103 YEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRS-YGFKPI--RNLTGHGLERYELHAGPSIPNYDEGGGVKLEEG 179 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-cCCccc--CCCcccCcCCCcccCCCccCccCCCCCceeCCC
Confidence 35677777888999999999999999999988877765 465321 111111111001221110 01135789999
Q ss_pred CEEEEEeCeee-CceeeeeeeeEee
Q 016073 272 DMALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
+++.|+.+..- .|+..|-.||-..
T Consensus 180 mV~aIEp~~t~G~G~v~~~~~~~iy 204 (291)
T PRK08671 180 DVYAIEPFATDGEGKVVEGPEVEIY 204 (291)
T ss_pred CEEEEcceEECCCCeEecCCceEEE
Confidence 99999987654 6888888888655
No 47
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=89.83 E-value=6.1 Score=34.89 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCCCCC-CCCcccCC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHAAAP-NDRTFEDG 271 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~~~p-~~~~l~~G 271 (396)
.++++.+.+.++++.+++.++||++-.||.+.+...+.+ .|... .|+..++ .|.. .|..+...+ ++.+|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~-~g~~~-~~~~~~Gh~iG~~---~~e~p~i~~~~~~~l~~g 178 (208)
T cd01092 104 ELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEE-AGYGE-YFIHRTGHGVGLE---VHEAPYISPGSDDVLEEG 178 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCccc-cCCCCCccccCcc---cCcCCCcCCCCCCCcCCC
Confidence 456788888899999999999999999999888777665 45421 1211111 1211 121110111 46789999
Q ss_pred CEEEEEeCeeeCc-eeeeeeeeEee
Q 016073 272 DMALLDMGAEYQF-YGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~~g-Y~aD~tRT~~v 295 (396)
.++.|+.+....| +..-+.-|+.|
T Consensus 179 mv~~iep~~~~~~~~g~~~ed~v~v 203 (208)
T cd01092 179 MVFTIEPGIYIPGKGGVRIEDDVLV 203 (208)
T ss_pred CEEEECCeEEecCCCEEEeeeEEEE
Confidence 9999998876544 34456677766
No 48
>PRK12897 methionine aminopeptidase; Reviewed
Probab=88.92 E-value=3.8 Score=37.68 Aligned_cols=96 Identities=7% Similarity=0.021 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCC----C-CCCCCcccC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----A-APNDRTFED 270 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~-~p~~~~l~~ 270 (396)
.+++.+++..++..+++.++||++-.|+...+...+.+. |... +...++=|-.. ..|-.+. . ..+..+|++
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~-g~~~--~~~~~GHgiGl-~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANE-GFSV--ARDFTGHGIGK-EIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHc-CCcc--CCCeEECccCC-cccCCCccCCCCCCCCCCCcCC
Confidence 455667778888888899999999999998887776653 5432 12222211111 1121110 0 013458999
Q ss_pred CCEEEEEeCee-----------------eCc-eeeeeeeeEee
Q 016073 271 GDMALLDMGAE-----------------YQF-YGSDITCSFPV 295 (396)
Q Consensus 271 Gd~v~iD~g~~-----------------~~g-Y~aD~tRT~~v 295 (396)
|.++.+.-|.. ++| +..-+.-|+.|
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~V 237 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAI 237 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEE
Confidence 99999998875 234 67777788877
No 49
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=88.64 E-value=1.5 Score=40.42 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016073 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (396)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 340 (396)
.++++=+++.++.+.+.+.++||++..||++.+.+++.+
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~ 51 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE 51 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 456666777788888888999999999999999999875
No 50
>PLN03158 methionine aminopeptidase; Provisional
Probab=88.54 E-value=1.8 Score=42.84 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=45.4
Q ss_pred ceeeeeeeeEeeCCCCC--HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 016073 284 FYGSDITCSFPVNGKFT--SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (396)
Q Consensus 284 gY~aD~tRT~~v~G~~~--~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~ 340 (396)
..++++.|+..| ..+. +.++++-+++.++++++.+++|||++-.||++++++.+.+
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~ 183 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIA 183 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 445778888888 4444 3567888899999999999999999999999999877654
No 51
>PRK12896 methionine aminopeptidase; Reviewed
Probab=87.88 E-value=8.7 Score=35.32 Aligned_cols=94 Identities=13% Similarity=0.120 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCC-----CCC-CCCc
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHA-----AAP-NDRT 267 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~-----~~p-~~~~ 267 (396)
.+++.+.+.+++..+++.++||++-.+|...+...+.+. |.... ...++ .|.. .|..+. ..+ ++.+
T Consensus 125 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-G~~~~--~~~~GHgiG~~---~he~p~~~~~~~~~~~~~~ 198 (255)
T PRK12896 125 AEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKN-GYSVV--RDLTGHGVGRS---LHEEPSVILTYTDPLPNRL 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEec--cCcccCCcCcc---cccCCCccccCCCCCCCCE
Confidence 456677778888888999999999999998888777664 54211 11111 1111 121110 011 3568
Q ss_pred ccCCCEEEEEeCee------------------eCceeeeeeeeEee
Q 016073 268 FEDGDMALLDMGAE------------------YQFYGSDITCSFPV 295 (396)
Q Consensus 268 l~~Gd~v~iD~g~~------------------~~gY~aD~tRT~~v 295 (396)
|++|.++.|+-+.. ...+..-+.-|+.|
T Consensus 199 le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~v 244 (255)
T PRK12896 199 LRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVV 244 (255)
T ss_pred ecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEE
Confidence 99999999987763 24566678888887
No 52
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=87.58 E-value=7.5 Score=35.75 Aligned_cols=97 Identities=18% Similarity=0.114 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CCcceee--eCCCccccccCCC--CCCCCCccc
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICA--TGENSAVLHYGHA--AAPNDRTFE 269 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~-~~~~iv~--sG~~~~~~h~~~~--~~p~~~~l~ 269 (396)
..|++-+++.++.+.+++.+|||++-.+|.......+.+. +.... .|+.-++ .|-. .|-.+. ...++++|+
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~-~~~~~~~~~~~~GHgiGle---~hE~~~~l~~~~~~~L~ 195 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK-KPELEPNFTKNLGFGIGLE---FRESSLIINAKNDRKLK 195 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh-ChhHHHhCcCCcccccCcc---cccCccccCCCCCCCcC
Confidence 4566778888899999999999999999988877776553 31111 1111111 1111 111110 011457899
Q ss_pred CCCEEEEEeCee-e----------CceeeeeeeeEee
Q 016073 270 DGDMALLDMGAE-Y----------QFYGSDITCSFPV 295 (396)
Q Consensus 270 ~Gd~v~iD~g~~-~----------~gY~aD~tRT~~v 295 (396)
+|.++.+..|.. . ..|..-++-|+.|
T Consensus 196 ~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 196 KGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred CCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 999999999985 2 3688889999988
No 53
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=87.31 E-value=9.4 Score=36.13 Aligned_cols=97 Identities=13% Similarity=0.049 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCC----CCCCCCcccCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----AAPNDRTFEDG 271 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~~p~~~~l~~G 271 (396)
.++..+.+..+++.+++.++||++-.||...+...+.+ .|+... ....+-|-.-..+|..+. ...++..+++|
T Consensus 102 ~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~-~G~~~~--~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~g 178 (291)
T cd01088 102 YDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIES-YGFKPI--RNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEG 178 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-cCCEEe--ecCCccCccCccccCCCccCccCCCCCCEeCCC
Confidence 34566677889999999999999999999988877766 465321 111111111011222110 01235689999
Q ss_pred CEEEEEeCeee-CceeeeeeeeEee
Q 016073 272 DMALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
+++.|+.+..- .|+..+-.||-..
T Consensus 179 mV~aIEp~~s~G~G~v~~~~~~~iy 203 (291)
T cd01088 179 DVYAIEPFATTGKGYVHDGPECSIY 203 (291)
T ss_pred CEEEEceeEECCCCeeecCCceEEE
Confidence 99999998664 5888777777554
No 54
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=87.24 E-value=9.4 Score=34.67 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCC----CCC-CCCcccC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----AAP-NDRTFED 270 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~~p-~~~~l~~ 270 (396)
+|++.+.+..+...+++.++||++-.|+.+.+.+.+.+. |... +...++-|-.-. .|..+. ..+ ++.+|++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-G~~~--~~~~~GHgiG~~-~~e~p~~~~~~~~~~~~~le~ 185 (238)
T cd01086 110 AKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKN-GYSV--VREFGGHGIGRK-FHEEPQIPNYGRPGTGPKLKP 185 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-Ccce--ecCccccCCCCc-cccCCCcCCccCCCCCCEecC
Confidence 467778888889999999999999999999888777664 5432 111111111000 121110 012 4678999
Q ss_pred CCEEEEEeCeee
Q 016073 271 GDMALLDMGAEY 282 (396)
Q Consensus 271 Gd~v~iD~g~~~ 282 (396)
|.++.++.+...
T Consensus 186 Gmv~~iep~i~~ 197 (238)
T cd01086 186 GMVFTIEPMINL 197 (238)
T ss_pred CCEEEEeeEEEC
Confidence 999999987653
No 55
>PRK12318 methionine aminopeptidase; Provisional
Probab=86.77 E-value=7.6 Score=36.78 Aligned_cols=81 Identities=11% Similarity=0.127 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCCCC-----CCCCc
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHAAA-----PNDRT 267 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~~~-----p~~~~ 267 (396)
.+|++.+++.++++.+++.++||++-.+|...+...+.+. |..... ..++ .|-. .|-.+ .. .++.+
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~-G~~~~~--~~~GHgIGl~---~hE~P-~i~~~~~~~~~~ 231 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY-GFSVVD--QFVGHGVGIK---FHENP-YVPHHRNSSKIP 231 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCC--CcccCCcCcc---ccCCC-cccCcCCCCCCE
Confidence 4567788888899999999999999999998888777653 543110 1111 1111 12111 01 12467
Q ss_pred ccCCCEEEEEeCeee
Q 016073 268 FEDGDMALLDMGAEY 282 (396)
Q Consensus 268 l~~Gd~v~iD~g~~~ 282 (396)
|++|.++.|+-+...
T Consensus 232 L~~GMV~~iEP~i~~ 246 (291)
T PRK12318 232 LAPGMIFTIEPMINV 246 (291)
T ss_pred eCCCCEEEECCEEEc
Confidence 999999999877644
No 56
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=86.55 E-value=12 Score=33.07 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCccee--eeCCCcc--ccccCCCCCCCCCcccCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSA--VLHYGHAAAPNDRTFEDG 271 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv--~sG~~~~--~~h~~~~~~p~~~~l~~G 271 (396)
.+++.+.+..++..+++.++||++-.||.+.+.+.+.+. |.. ..++..+ +.|.... .|.... ..++.+|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~-~~~~~~~GH~iG~~~~~~~P~i~~--~~~~~~l~~g 179 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEY-GLE-EPYPHGLGHGIGLEFHEPGPNIAR--PGDDTVLEPG 179 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHT-TEG-EEBTSSSEEEESSSSSEEEEEESS--TTTSSB--TT
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhh-ccc-ceeeecccccccccccccceeeec--ccccceecCC
Confidence 677788888899999999999999999999988888764 641 1111111 2232111 122110 1156789999
Q ss_pred CEEEEEeCee-eCce-eeeeeeeEee
Q 016073 272 DMALLDMGAE-YQFY-GSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~-~~gY-~aD~tRT~~v 295 (396)
.++.++.+.. ..|. ..-+.-|+.|
T Consensus 180 mv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 180 MVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp BEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred CceeEeeeEEccCCCcEEEEEEEEEE
Confidence 9999999765 3333 5556656554
No 57
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=85.99 E-value=5.3 Score=37.93 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccC---CC-CCCCCCcccCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYG---HA-AAPNDRTFEDG 271 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~---~~-~~p~~~~l~~G 271 (396)
.++..+++..+++.+++.++||++-.||...+...+.+ .|+... ....+-|-....+|.. +. ...++.++++|
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~-~G~~~i--~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~G 182 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIES-YGVKPI--SNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEG 182 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-cCCeee--cCCCCcceecccccCCCccCeecCCCCCEeCCC
Confidence 36677778888899999999999999999988877766 465321 0011111000112211 00 01135689999
Q ss_pred CEEEEEeCeee-CceeeeeeeeEee
Q 016073 272 DMALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
+++.|+.+... .|+..+-.+|-..
T Consensus 183 mV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 183 DVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred CEEEEceeEECCcCeEecCCCeEEE
Confidence 99999987654 5888877776543
No 58
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=85.44 E-value=4.2 Score=38.05 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCCcc----
Q 016073 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDT---- 377 (396)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~GHgiGl~~---- 377 (396)
+.+++.++=+++.+.+-+-+|||++.-||-+...+...+.+.+-|+ .-++|...|+..
T Consensus 87 d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl------------------~aGi~FPtG~SlN~cA 148 (397)
T KOG2775|consen 87 DLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGL------------------NAGIGFPTGCSLNHCA 148 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccc------------------cccccCCCcccccchh
Confidence 4556666667777788888999999999988887776654455443 123334444433
Q ss_pred -cCCCCCCCCCccccCCC
Q 016073 378 -HDPGGYPKVYMIKLTAD 394 (396)
Q Consensus 378 -he~~~~~~g~~~~~~~~ 394 (396)
|-.| .+|++++||.|
T Consensus 149 AHyTp--NaGd~tVLqyd 164 (397)
T KOG2775|consen 149 AHYTP--NAGDKTVLKYD 164 (397)
T ss_pred hhcCC--CCCCceeeeec
Confidence 4444 37899999986
No 59
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=85.22 E-value=9.5 Score=37.73 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccC---CCCCC-CCCcccC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYG---HAAAP-NDRTFED 270 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~---~~~~p-~~~~l~~ 270 (396)
.++++.+++.++...+++.++||++-.||.+.....+.+ .|...... +=-+.|-.. .+++. +.-.| ++.+|++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~-~G~~~~h~-~GhgiGl~~-~~~~~e~~~~l~~~~~~~L~~ 347 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKK-YGIHKDSR-TGYPIGLSY-PPDWGERTMSLRPGDNTVLKP 347 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccCCC-ceeeeccCc-CCCCCCccccccCCCCceecC
Confidence 466788889999999999999999999999887776655 45432111 000112111 01110 00012 4578999
Q ss_pred CCEEEEEeCeeeCceeeeeeeeEee
Q 016073 271 GDMALLDMGAEYQFYGSDITCSFPV 295 (396)
Q Consensus 271 Gd~v~iD~g~~~~gY~aD~tRT~~v 295 (396)
|.++.+.-|.-..|+..-+.-|+.|
T Consensus 348 GMv~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 348 GMTFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred CCEEEEcceeEeCCCCeEEeeEEEE
Confidence 9999999988666666677788877
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=83.50 E-value=12 Score=33.84 Aligned_cols=91 Identities=11% Similarity=0.025 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC---CC---CCcceeeeCCCccccccCCCCCCCCCcc
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR---HC---SYTCICATGENSAVLHYGHAAAPNDRTF 268 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~---~~---~~~~iv~sG~~~~~~h~~~~~~p~~~~l 268 (396)
..+++.+.+.++++.+++.++||++-.||...+...+.+ .|+. .. .....++.+++.. .-...+
T Consensus 121 ~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~-~G~~~~~~~~~h~~g~~~~~~~~~~---------~~~~~l 190 (228)
T cd01089 121 KKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVD-YGCTPVEGVLSHQLKRVVSSGEGKA---------KLVECV 190 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH-cCCEEecCccccCcCceEecCCCCc---------cchhhc
Confidence 466778888889999999999999999999888877766 4631 10 0011222222110 013468
Q ss_pred cCCCEEEEEeCeeeCc-eeeeeeeeEee
Q 016073 269 EDGDMALLDMGAEYQF-YGSDITCSFPV 295 (396)
Q Consensus 269 ~~Gd~v~iD~g~~~~g-Y~aD~tRT~~v 295 (396)
++|.++.+..+....| +.+-+.-|+.|
T Consensus 191 ~~gmvf~~ep~~~~~g~~~~~~~~Tv~v 218 (228)
T cd01089 191 KHGLLFPYPVLYEKEGEVVAQFKLTVLL 218 (228)
T ss_pred cCCcccccceeEccCCCeEEEEEEEEEE
Confidence 9999999998887654 88889999988
No 61
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=82.71 E-value=11 Score=38.26 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC----CCCCcceee-eC--CCc-------cccccCCC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR----HCSYTCICA-TG--ENS-------AVLHYGHA 260 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~----~~~~~~iv~-sG--~~~-------~~~h~~~~ 260 (396)
..++...++..|...+++.++||++-.||.+.+...+.. .|.. .+.+.+|.- +| -.- .+|++..
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies-~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~- 341 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIES-YEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKG- 341 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-cCCcccCcccccccccCCcccCCCCccccCCCcCCeeCC-
Confidence 456777888889999999999999999999999888766 4542 221222221 11 111 1222211
Q ss_pred CCCCCCcccCCCEEEEEeCeee-CceeeeeeeeEee
Q 016073 261 AAPNDRTFEDGDMALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
.+..++++|+++.|+..+.- .||..|-.+|-..
T Consensus 342 --~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 342 --GENTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred --CCCCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 13458999999999998775 6888886666543
No 62
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=82.07 E-value=21 Score=32.43 Aligned_cols=96 Identities=9% Similarity=-0.029 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCcc-ccccCCC------CCCCCCcc
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA-VLHYGHA------AAPNDRTF 268 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~-~~h~~~~------~~p~~~~l 268 (396)
.|++.+++.+++..+++.++||++-.||.+.+...+.+. |...... ...|..-. ..|..+. ...++.+|
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~-G~~~~~~---~~~GHgiGl~~he~~~~~g~~~~~~~~~~L 186 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREH-DLLRYRT---FGYGHSFGVLSHYYGREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCcccc---cccCcccccccccCCCccccccCCCCCCcc
Confidence 567788889999999999999999999999888777663 5322100 01111100 0121100 01145789
Q ss_pred cCCCEEEEEeCeeeC----c-eeeeeeeeEee
Q 016073 269 EDGDMALLDMGAEYQ----F-YGSDITCSFPV 295 (396)
Q Consensus 269 ~~Gd~v~iD~g~~~~----g-Y~aD~tRT~~v 295 (396)
++|.++.++-+..+. | .-.-+..|+.|
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 999999999987652 2 23337788777
No 63
>PRK09795 aminopeptidase; Provisional
Probab=81.18 E-value=24 Score=34.38 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCccccccCCCCCC-CCCcc
Q 016073 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAP-NDRTF 268 (396)
Q Consensus 190 ~~Ei~~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p-~~~~l 268 (396)
+++-+.++++-+++.++...+++.++||++-.||.+.....+.+. |... .|.--++-|-. -..|-.+.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~-g~~~-~~~h~~GHgiG-l~~he~p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA-GYGD-YFGHNTGHAIG-IEVHEDPRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCc-cCCCCCCccCC-ccccCCCCcCCCCCCCc
Confidence 555456788999999999999999999999999998888777654 5321 11111111110 01222110111 46789
Q ss_pred cCCCEEEEEeCeeeCce-eeeeeeeEee
Q 016073 269 EDGDMALLDMGAEYQFY-GSDITCSFPV 295 (396)
Q Consensus 269 ~~Gd~v~iD~g~~~~gY-~aD~tRT~~v 295 (396)
++|.++.|+-|.-..|. -.-+.-|+.|
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 99999999988755442 3456677777
No 64
>PRK07281 methionine aminopeptidase; Reviewed
Probab=80.66 E-value=19 Score=33.98 Aligned_cols=81 Identities=12% Similarity=0.121 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCC----C-CCCCCcc
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHA----A-APNDRTF 268 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~----~-~p~~~~l 268 (396)
.|++.+++.+++..+++.++||++-.||...+...+.+ .|... +...++ .|.+ .|-.|. . ..++.+|
T Consensus 150 ~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~-~G~~~--~~~~~GHGIGl~---~hE~P~i~~~~~~~~~~~L 223 (286)
T PRK07281 150 VKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAES-RGYGV--VRDLVGHGVGPT---MHEEPMVPNYGTAGRGLRL 223 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH-cCCcc--CCCeeeeeCCCc---cCCCCcCCCcccCCCCCEE
Confidence 57888889999999999999999999999887777655 35321 211122 1221 121110 0 0134679
Q ss_pred cCCCEEEEEeCeee
Q 016073 269 EDGDMALLDMGAEY 282 (396)
Q Consensus 269 ~~Gd~v~iD~g~~~ 282 (396)
++|.++.|.-+...
T Consensus 224 e~GMV~tiEPgiy~ 237 (286)
T PRK07281 224 REGMVLTIEPMINT 237 (286)
T ss_pred CCCCEEEECCeeEc
Confidence 99999999988743
No 65
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=79.62 E-value=19 Score=35.67 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC------CCcceeeeCCCccccccCCCC--CC-CCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC------SYTCICATGENSAVLHYGHAA--AP-NDR 266 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~------~~~~iv~sG~~~~~~h~~~~~--~p-~~~ 266 (396)
.+++...+..++..+++.++||++-.+|...+...+.. .|+... .....+--|...-++++.. . .+ .+.
T Consensus 140 ~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~-~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~-~~~~~~~~~ 217 (389)
T TIGR00495 140 KADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHS-YGCTPVEGMLSHQLKQHVIDGEKVIISNPSD-SQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH-cCCeecCCceeecccceeccCCCeeeecCCc-cccCCCCCC
Confidence 45566667778888999999999999999988877765 465311 0001111111111233211 0 00 234
Q ss_pred cccCCCEEEEEeCeee-Cceeeeee-eeEee
Q 016073 267 TFEDGDMALLDMGAEY-QFYGSDIT-CSFPV 295 (396)
Q Consensus 267 ~l~~Gd~v~iD~g~~~-~gY~aD~t-RT~~v 295 (396)
.+++|+++.||....- .|+.-+.. ||-+.
T Consensus 218 ~le~gev~aIEp~vs~G~g~v~~~~~~~tiy 248 (389)
T TIGR00495 218 EFEENEVYAVDILVSTGEGKAKDADQRTTIY 248 (389)
T ss_pred EecCCCEEEEeeeecCCCceEEECCCeeEEE
Confidence 7899999999998775 46655554 55433
No 66
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=77.68 E-value=29 Score=31.58 Aligned_cols=100 Identities=13% Similarity=-0.007 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---CCCC-------------CCCCcceee--eCCCc-ccc
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGCR-------------HCSYTCICA--TGENS-AVL 255 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~---~g~~-------------~~~~~~iv~--sG~~~-~~~ 255 (396)
..++..+.+.++++.+++.++||++-.||.+.+...+.+. .|.. ...|.--++ .|-.. ..|
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p 183 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVG 183 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccCc
Confidence 3566777888899999999999999999988777665432 1110 000100011 11110 112
Q ss_pred ccCCCCCCCCCcccCCCEEEEEeCeeeC-----------ceeeeeeeeEee
Q 016073 256 HYGHAAAPNDRTFEDGDMALLDMGAEYQ-----------FYGSDITCSFPV 295 (396)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~~~~-----------gY~aD~tRT~~v 295 (396)
++.. ...++.+|++|.++.+.-|.... ++..-+.-|+.|
T Consensus 184 ~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~V 233 (243)
T cd01087 184 GYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLV 233 (243)
T ss_pred cccc-cCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEE
Confidence 1100 01145789999999999988654 367777888877
No 67
>PRK14575 putative peptidase; Provisional
Probab=76.48 E-value=26 Score=34.83 Aligned_cols=98 Identities=10% Similarity=-0.035 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCCCC-CCCCcccCC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHAAA-PNDRTFEDG 271 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~~~-p~~~~l~~G 271 (396)
..+++.+++.++...+++.++||++-.+|.+.....+.+. |.... +...+. .|-. .-.|..+... -++.+|++|
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHGiG~~-lg~~e~P~i~~~~~~~Le~G 362 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRGHLGHGNGVF-LGLEESPFVSTHATESFTSG 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCcccCC-CCCccCCCCCCCCCCCcCCC
Confidence 3567778888999999999999999999998887777653 54211 100111 1100 0012111011 145689999
Q ss_pred CEEEEEeCeeeCc-eeeeeeeeEee
Q 016073 272 DMALLDMGAEYQF-YGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~~g-Y~aD~tRT~~v 295 (396)
.++.+.-|.-..| +..-+.-|+.|
T Consensus 363 Mv~tiEpgiy~~g~gGvriEDtvlV 387 (406)
T PRK14575 363 MVLSLETPYYGYNLGSIMIEDMILI 387 (406)
T ss_pred CEEEECCeeecCCCcEEEEEeEEEE
Confidence 9999998874333 44667888887
No 68
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=75.49 E-value=32 Score=33.87 Aligned_cols=97 Identities=16% Similarity=0.079 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCccee--eeCCCccccccCC-CCCC-CCCcccCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSAVLHYGH-AAAP-NDRTFEDG 271 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv--~sG~~~~~~h~~~-~~~p-~~~~l~~G 271 (396)
.|+.-+++.+++.++++.++||++=.++.+.....+.+. |.. ..|.--. ..| ..-..|-.+ ...| ++..|++|
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~-g~~-~~~~h~~GHgvG-~~l~vhE~p~~~~~~~~~~L~~G 340 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA-GYG-LYFLHGTGHGVG-FVLDVHEHPQYLSPGSDTTLEPG 340 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc-CCc-ccccCCccccCC-CCcccCcCccccCCCCCccccCC
Confidence 457788899999999999999999999998877777653 321 1111001 112 011122211 0112 46789999
Q ss_pred CEEEEEeCeee-CceeeeeeeeEee
Q 016073 272 DMALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
-++.++-|..+ ..+-.-|..++.|
T Consensus 341 Mv~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 341 MVFSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred cEEEeccccccCCCceEEEEEEEEE
Confidence 99999999554 6789999999988
No 69
>PRK14576 putative endopeptidase; Provisional
Probab=75.03 E-value=38 Score=33.71 Aligned_cols=98 Identities=14% Similarity=-0.019 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceee--eCCCccccccCCCCC-CCCCcccCC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSAVLHYGHAAA-PNDRTFEDG 271 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~--sG~~~~~~h~~~~~~-p~~~~l~~G 271 (396)
..+++.+++.++...+++.+|||++-.||...+...+.+ .|.... +...++ .|..-. .|..+.-. .++.+|++|
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~-~G~~~~-~~~~~GHgiG~~l~-~~e~P~i~~~~~~~Le~G 361 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKT-SGLPHY-NRGHLGHGDGVFLG-LEEVPFVSTQATETFCPG 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccc-cCCCCCCCCCCCCC-cCcCCCcCCCCCCccCCC
Confidence 466788888999999999999999999999888777665 354211 101111 110000 11111011 145789999
Q ss_pred CEEEEEeCeeeCc-eeeeeeeeEee
Q 016073 272 DMALLDMGAEYQF-YGSDITCSFPV 295 (396)
Q Consensus 272 d~v~iD~g~~~~g-Y~aD~tRT~~v 295 (396)
.++.++.+....| ...-+.-|+.|
T Consensus 362 Mv~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 362 MVLSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred CEEEECCceeecCCCEEEEeeEEEE
Confidence 9999987654333 23446778877
No 70
>PRK15173 peptidase; Provisional
Probab=74.21 E-value=41 Score=32.34 Aligned_cols=99 Identities=10% Similarity=0.014 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCCcceeeeCCCc-cccccCCCCC-CCCCcccCCC
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS-AVLHYGHAAA-PNDRTFEDGD 272 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~~~~~~iv~sG~~~-~~~h~~~~~~-p~~~~l~~Gd 272 (396)
..|++.+++.+++..+++.++||++-.+|.......+.+ .|.... +...+.-|-.. .-.|..+... .++.+|++|.
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~-~G~~~~-~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK-SGLPNY-NRGHLGHGNGVFLGLEESPFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH-cCCccc-cCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCC
Confidence 456788888899999999999999999999887777665 354211 10111111100 0012211111 1456899999
Q ss_pred EEEEEeCeee-CceeeeeeeeEee
Q 016073 273 MALLDMGAEY-QFYGSDITCSFPV 295 (396)
Q Consensus 273 ~v~iD~g~~~-~gY~aD~tRT~~v 295 (396)
++.|+-|.-. ..+..-+.-|+.|
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEE
Confidence 9999888643 3334567888877
No 71
>smart00235 ZnMc Zinc-dependent metalloprotease. Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.
Probab=48.42 E-value=6 Score=32.70 Aligned_cols=17 Identities=41% Similarity=0.737 Sum_probs=14.0
Q ss_pred cccccccccCCcccCCCC
Q 016073 365 MPHGLGHFLGIDTHDPGG 382 (396)
Q Consensus 365 ~~h~~GHgiGl~~he~~~ 382 (396)
..|.+||.+||. ||...
T Consensus 90 ~~HEigHaLGl~-H~~~~ 106 (140)
T smart00235 90 AAHELGHALGLY-HEQSR 106 (140)
T ss_pred HHHHHHHHhcCC-cCCCC
Confidence 569999999999 87654
No 72
>PRK10879 proline aminopeptidase P II; Provisional
Probab=46.71 E-value=2.4e+02 Score=28.32 Aligned_cols=100 Identities=13% Similarity=0.026 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---cCCCCC---------CCCccee--eeCCCcc-ccccCCC
Q 016073 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGGCRH---------CSYTCIC--ATGENSA-VLHYGHA 260 (396)
Q Consensus 196 ~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~---~~g~~~---------~~~~~iv--~sG~~~~-~~h~~~~ 260 (396)
.|++-+++.++...+++.++||++-.+|.......+.+ +.|... ..+...+ ..|..-. ..|-.+.
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 45677788888899999999999999988766544321 112100 0000111 0111000 0221110
Q ss_pred -CCCCCCcccCCCEEEEEeCeee----------CceeeeeeeeEee
Q 016073 261 -AAPNDRTFEDGDMALLDMGAEY----------QFYGSDITCSFPV 295 (396)
Q Consensus 261 -~~p~~~~l~~Gd~v~iD~g~~~----------~gY~aD~tRT~~v 295 (396)
....+++|++|-++.|.-|.-. .|+..-+.-|+.|
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlV 409 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVI 409 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEE
Confidence 0013578999999999998743 3566778888887
No 73
>cd04278 ZnMc_MMP Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases).
Probab=45.44 E-value=7.7 Score=32.88 Aligned_cols=15 Identities=40% Similarity=0.844 Sum_probs=11.9
Q ss_pred ccccccccccCCcccC
Q 016073 364 FMPHGLGHFLGIDTHD 379 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he 379 (396)
-+.|.+||.|||. |.
T Consensus 110 ~~~HEiGHaLGL~-H~ 124 (157)
T cd04278 110 VAAHEIGHALGLG-HS 124 (157)
T ss_pred HHHHHhccccccC-CC
Confidence 3679999999994 54
No 74
>cd00203 ZnMc Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease.
Probab=44.92 E-value=5.7 Score=33.75 Aligned_cols=17 Identities=47% Similarity=0.757 Sum_probs=13.8
Q ss_pred ccccccccccCCcccCCC
Q 016073 364 FMPHGLGHFLGIDTHDPG 381 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~~ 381 (396)
-+.|.+||.+||. |+..
T Consensus 99 ~~~HElGH~LGl~-H~~~ 115 (167)
T cd00203 99 TIAHELGHALGFY-HDHD 115 (167)
T ss_pred hHHHHHHHHhCCC-ccCc
Confidence 5789999999998 6543
No 75
>PF00413 Peptidase_M10: Matrixin This Prosite motif covers only the active site.; InterPro: IPR001818 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M10 (clan MA(M)). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Sequences having this domain are extracellular metalloproteases, such as collagenase and stromelysin, which degrade the extracellular matrix, are known as matrixins. They are zinc-dependent, calcium-activated proteases synthesised as inactive precursors (zymogens), which are proteolytically cleaved to yield the active enzyme [, ]. All matrixins and related proteins possess 2 domains: an N-terminal domain, and a zinc-binding active site domain. The N-terminal domain peptide, cleaved during the activation step, includes a conserved PRCGVPDV octapeptide, known as the cysteine switch, whose Cys residue chelates the active site zinc atom, rendering the enzyme inactive [, ]. The active enzyme degrades components of the extracellular matrix, playing a role in the initial steps of tissue remodelling during morphogenesis, wound healing, angiogenesis and tumour invasion [, ].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis, 0031012 extracellular matrix; PDB: 1Q3A_C 3V96_B 1HV5_D 1CXV_A 1SRP_A 1FBL_A 1ZVX_A 1JH1_A 1I76_A 2OY4_A ....
Probab=38.21 E-value=5.6 Score=33.31 Aligned_cols=15 Identities=40% Similarity=0.778 Sum_probs=11.9
Q ss_pred ccccccccccCCcccC
Q 016073 364 FMPHGLGHFLGIDTHD 379 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he 379 (396)
-+.|.+||.+|| -|.
T Consensus 108 v~~HEiGHaLGL-~H~ 122 (154)
T PF00413_consen 108 VAIHEIGHALGL-DHS 122 (154)
T ss_dssp HHHHHHHHHTTB-ESS
T ss_pred hhhhccccccCc-CcC
Confidence 467999999999 444
No 76
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=37.54 E-value=96 Score=18.99 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 016073 200 NDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 231 (396)
Q Consensus 200 a~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~ 231 (396)
+.++..++..+...+....|+.+|...+...+
T Consensus 4 C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C 35 (39)
T PF05184_consen 4 CDICKFVVKEIEKLLKNNKTEEEIKKALEKAC 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 56788888899999999999999998877655
No 77
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=35.78 E-value=1.6e+02 Score=26.57 Aligned_cols=40 Identities=8% Similarity=-0.055 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHHH
Q 016073 301 SDQSLIYNAVLKAHNAVINAMKPG--VCWVDMHKLAEKIILE 340 (396)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~~kpG--~~~~~v~~~~~~~~~~ 340 (396)
..+.+.-..+.++.+.+.+.++|| ++-.||.+.+.+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~ 45 (224)
T cd01085 4 AAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQ 45 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHH
Confidence 445555566678888899999999 9999999999876653
No 78
>cd04279 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=35.04 E-value=14 Score=31.26 Aligned_cols=18 Identities=39% Similarity=0.560 Sum_probs=14.3
Q ss_pred ccccccccccCCcccCCC
Q 016073 364 FMPHGLGHFLGIDTHDPG 381 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~~ 381 (396)
-..|.+||.|||.-+..+
T Consensus 107 ~~~HEiGHaLGL~H~~~~ 124 (156)
T cd04279 107 IALHELGHALGLWHHSDR 124 (156)
T ss_pred HHHHHhhhhhcCCCCCCC
Confidence 356999999999877654
No 79
>cd04271 ZnMc_ADAM_fungal Zinc-dependent metalloprotease, ADAM_fungal subgroup. The adamalysin_like or ADAM (A Disintegrin And Metalloprotease) family of metalloproteases are integral membrane proteases acting on a variety of extracellular targets. They are involved in shedding soluble peptides or proteins from the cell surface. This subfamily contains fungal ADAMs, whose precise function has yet to be determined.
Probab=33.66 E-value=17 Score=33.14 Aligned_cols=16 Identities=38% Similarity=0.686 Sum_probs=13.7
Q ss_pred ccccccccccCCcccCC
Q 016073 364 FMPHGLGHFLGIDTHDP 380 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~ 380 (396)
-+-|.+||.+|+. ||.
T Consensus 148 t~AHElGHnLGm~-HD~ 163 (228)
T cd04271 148 VFAHEIGHTFGAV-HDC 163 (228)
T ss_pred ehhhhhhhhcCCC-CCC
Confidence 4789999999998 774
No 80
>cd04277 ZnMc_serralysin_like Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases are important virulence factors in pathogenic bacteria. They may be secreted into the medium via a mechanism found in gram-negative bacteria, that does not require n-terminal signal sequences which are cleaved after the transmembrane translocation. A calcium-binding domain c-terminal to the metalloprotease domain, which contains multiple tandem repeats of a nine-residue motif including the pattern GGxGxD, and which forms a parallel beta roll may be involved in the translocation mechanism and/or substrate binding. Serralysin family members may have a broad spectrum of substrates each, including host immunoglobulins, complement proteins, cell matrix and cytoskeletal proteins, as well as antimicrobial peptides.
Probab=30.00 E-value=12 Score=32.76 Aligned_cols=13 Identities=38% Similarity=0.823 Sum_probs=11.2
Q ss_pred ccccccccccCCc
Q 016073 364 FMPHGLGHFLGID 376 (396)
Q Consensus 364 ~~~h~~GHgiGl~ 376 (396)
-+.|.+||.+||.
T Consensus 116 t~~HEiGHaLGL~ 128 (186)
T cd04277 116 TIIHEIGHALGLE 128 (186)
T ss_pred HHHHHHHHHhcCC
Confidence 4779999999994
No 81
>cd04269 ZnMc_adamalysin_II_like Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions.
Probab=29.91 E-value=17 Score=31.82 Aligned_cols=17 Identities=59% Similarity=1.048 Sum_probs=13.5
Q ss_pred ccccccccccCCcccCCC
Q 016073 364 FMPHGLGHFLGIDTHDPG 381 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~~ 381 (396)
.+-|.+||.+|+. ||.+
T Consensus 134 ~~AHElGH~lG~~-HD~~ 150 (194)
T cd04269 134 TMAHELGHNLGME-HDDG 150 (194)
T ss_pred HHHHHHHhhcCCC-cCCC
Confidence 3569999999998 7654
No 82
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=29.49 E-value=2.8e+02 Score=29.91 Aligned_cols=95 Identities=20% Similarity=0.130 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-------CCCcceeeeCCCccccccCCCCCCCCCc
Q 016073 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-------CSYTCICATGENSAVLHYGHAAAPNDRT 267 (396)
Q Consensus 195 ~~r~Aa~i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~~-------~~~~~iv~sG~~~~~~h~~~~~~p~~~~ 267 (396)
.|++|-...-.+.++++..+|||..-.+|.......+.+. +-+. .+|..-+-+-+++.... .-++++
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~-~Pel~~~~~k~lG~~iGlEFREssl~in-----aKnd~~ 331 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN-KPELVPNFTKNLGFGIGLEFRESSLVIN-----AKNDRV 331 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc-Ccchhhhhhhhcccccceeeeccccccc-----ccchhh
Confidence 3577888888889999999999999999988877777653 2110 11111111222332221 226789
Q ss_pred ccCCCEEEEEeCee-------eCceeeeeeeeEee
Q 016073 268 FEDGDMALLDMGAE-------YQFYGSDITCSFPV 295 (396)
Q Consensus 268 l~~Gd~v~iD~g~~-------~~gY~aD~tRT~~v 295 (396)
|++|.++.|.+|.. -+.|.--++-|+.|
T Consensus 332 lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv 366 (960)
T KOG1189|consen 332 LKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLV 366 (960)
T ss_pred hccCcEEEEeeccccccCcccccchhhhccceeee
Confidence 99999999999943 23477778899988
No 83
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=28.87 E-value=81 Score=32.69 Aligned_cols=62 Identities=10% Similarity=0.121 Sum_probs=38.6
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCCceeeecCCCccccccCCC--ceeecCCCCCCEEEEEEecCCeEEEEecCC
Q 016073 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESY--FAYLFGVREPGFYGAIDIATGKSILFAPRL 97 (396)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~f~~~~n--~~YLtG~~~~~~~lvi~~~~g~~~l~~~~~ 97 (396)
+.-++++.|+. +++ ++.|+.+..++. -.|....+ -.|++||.++.++++|+ +.++.|++...
T Consensus 11 ~~~~~~~~~~~----~~i---~aYi~Ps~DaH~-------sEy~~~~D~R~~flsGFsGsag~Avit--~~~a~lwtD~R 74 (606)
T KOG2413|consen 11 ELMRLRELMKS----PPI---DAYILPSTDAHQ-------SEYIADRDERRAFLSGFSGSAGTAVIT--EEEAALWTDGR 74 (606)
T ss_pred HHHHHHHHhcC----CCc---eEEEccCCchhh-------hhhhcchhhhhhhhcccCCCcceEEEe--cCcceEEEccH
Confidence 44556666665 356 566676644322 22222333 35999999998888885 34788888653
No 84
>cd04327 ZnMc_MMP_like_3 Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=28.38 E-value=15 Score=32.50 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=13.8
Q ss_pred cccccccccCCcccCCCC
Q 016073 365 MPHGLGHFLGIDTHDPGG 382 (396)
Q Consensus 365 ~~h~~GHgiGl~~he~~~ 382 (396)
..|.+||.||+. ||.-.
T Consensus 96 i~HElgHaLG~~-HEh~r 112 (198)
T cd04327 96 VLHEFGHALGFI-HEHQS 112 (198)
T ss_pred HHHHHHHHhcCc-ccccC
Confidence 569999999997 87554
No 85
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases.
Probab=28.15 E-value=15 Score=31.06 Aligned_cols=15 Identities=40% Similarity=0.669 Sum_probs=11.9
Q ss_pred ccccccccccCCccc
Q 016073 364 FMPHGLGHFLGIDTH 378 (396)
Q Consensus 364 ~~~h~~GHgiGl~~h 378 (396)
-..|.+||.+||.--
T Consensus 97 ~~~HEiGHaLGL~H~ 111 (165)
T cd04268 97 TAEHELGHALGLRHN 111 (165)
T ss_pred HHHHHHHHHhccccc
Confidence 367999999999643
No 86
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=26.43 E-value=55 Score=19.50 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=13.3
Q ss_pred CCCCHHHHHHHHHHHH
Q 016073 10 PKVPKELYFINREKVL 25 (396)
Q Consensus 10 ~~~~~~~~~~R~~~l~ 25 (396)
-.|+.+||.+++++|.
T Consensus 15 G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 15 GEISEEEYEQKKARLL 30 (31)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 3589999999998875
No 87
>cd04273 ZnMc_ADAMTS_like Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that combine ADAM-like metalloproteinases with thrombospondin type-1 repeats. ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) proteinases are inhibited by TIMPs (tissue inhibitors of metalloproteinases), and they play roles in coagulation, angiogenesis, development and progression of arthritis. They hydrolyze the von Willebrand factor precursor and various components of the extracellular matrix.
Probab=26.27 E-value=29 Score=30.86 Aligned_cols=16 Identities=50% Similarity=0.916 Sum_probs=13.3
Q ss_pred ccccccccccCCcccCC
Q 016073 364 FMPHGLGHFLGIDTHDP 380 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~ 380 (396)
-+-|.+||.+|+. ||.
T Consensus 143 ~~aHElGH~LG~~-HD~ 158 (207)
T cd04273 143 TIAHELGHVLGMP-HDG 158 (207)
T ss_pred eeeeechhhcCCC-CCC
Confidence 4779999999998 554
No 88
>cd04270 ZnMc_TACE_like Zinc-dependent metalloprotease; TACE_like subfamily. TACE, the tumor-necrosis factor-alpha converting enzyme, releases soluble TNF-alpha from transmembrane pro-TNF-alpha.
Probab=25.72 E-value=22 Score=32.66 Aligned_cols=17 Identities=47% Similarity=0.843 Sum_probs=13.6
Q ss_pred ccccccccccCCcccCCC
Q 016073 364 FMPHGLGHFLGIDTHDPG 381 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~~ 381 (396)
-+-|.+||.+|+. ||.+
T Consensus 170 t~AHElGHnlGm~-HD~~ 186 (244)
T cd04270 170 VTAHELGHNFGSP-HDPD 186 (244)
T ss_pred HHHHHHHHhcCCC-CCCC
Confidence 3669999999998 6655
No 89
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=25.20 E-value=3.8e+02 Score=23.57 Aligned_cols=53 Identities=11% Similarity=0.201 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccc
Q 016073 300 TSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLG 370 (396)
Q Consensus 300 ~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~h~~G 370 (396)
.++++..-..+.+=+.+.+...-|..+..+.-+...+++.+ |-+..|+-|..|
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~------------------gk~~~yy~q~~G 166 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTK------------------GKGSRYYSQTEG 166 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHc------------------CCCCcceeeccC
Confidence 37788888888999999999999999999988888877763 445567777766
No 90
>PF11350 DUF3152: Protein of unknown function (DUF3152); InterPro: IPR022603 This entry represents Actinobacteria proteins of unknown function. Some are annotated as membrane proteins, however this cannot be confirmed.
Probab=24.75 E-value=34 Score=30.38 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=16.8
Q ss_pred ccccccccccCCcccCCCCCCCCCccc
Q 016073 364 FMPHGLGHFLGIDTHDPGGYPKVYMIK 390 (396)
Q Consensus 364 ~~~h~~GHgiGl~~he~~~~~~g~~~~ 390 (396)
...|.+||.||. -||.-. .+|...+
T Consensus 142 vINHEVGH~LGh-~H~~Cp-g~G~~AP 166 (203)
T PF11350_consen 142 VINHEVGHALGH-GHEPCP-GPGRPAP 166 (203)
T ss_pred hhhhhhhhhccc-CCCcCC-CCCCcCC
Confidence 467999999998 777443 2344433
No 91
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=24.37 E-value=2.6e+02 Score=29.47 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-CCCCcceeeeCC-----CccccccCCCCCCCCCcccCCCEEE
Q 016073 202 ISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-HCSYTCICATGE-----NSAVLHYGHAAAPNDRTFEDGDMAL 275 (396)
Q Consensus 202 i~~~~~~~~~~~i~~G~sE~ei~~~~~~~~~~~~g~~-~~~~~~iv~sG~-----~~~~~h~~~~~~p~~~~l~~Gd~v~ 275 (396)
......+.++..+|||.+-.+|...+...+... |-+ .+.|...++++- .+..|. ..-++|+||.|+++.
T Consensus 306 fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~-~pel~pnF~~nvG~~igiefR~s~~~~----nvkn~r~lq~g~~fn 380 (1001)
T COG5406 306 FLYMLQKYILGLVRPGTDSGIIYSEAEKYISSN-GPELGPNFIYNVGLMIGIEFRSSQKPF----NVKNGRVLQAGCIFN 380 (1001)
T ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhc-CCccCchHhhhhhhhccccccccccce----eccCCceeccccEEE
Confidence 334455667778999999889988888777654 322 223322232221 112222 223678999999999
Q ss_pred EEeC
Q 016073 276 LDMG 279 (396)
Q Consensus 276 iD~g 279 (396)
|.+|
T Consensus 381 is~g 384 (1001)
T COG5406 381 ISLG 384 (1001)
T ss_pred Eeec
Confidence 9997
No 92
>PHA02447 hypothetical protein
Probab=21.30 E-value=44 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=20.4
Q ss_pred cCCCceeecCCCCCCEEEEEEecCCeEEEEec
Q 016073 64 QESYFAYLFGVREPGFYGAIDIATGKSILFAP 95 (396)
Q Consensus 64 ~~~n~~YLtG~~~~~~~lvi~~~~g~~~l~~~ 95 (396)
|.-...|||||..|+-+-.++|.+.+-.++-|
T Consensus 6 qtltwewftgfvgpgrwravlpgdrrnawinp 37 (86)
T PHA02447 6 QTLTWEWFTGFVGPGRWRAVLPGDRRNAWINP 37 (86)
T ss_pred eeeehhhhhcccCCCceeeecCCcccccccCh
Confidence 33445699999999877666675543333333
No 93
>PF05572 Peptidase_M43: Pregnancy-associated plasma protein-A; InterPro: IPR008754 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase M43 (cytophagalysin family, clan MA(M)), subfamily M43. The predicted active site residues for members of this family and thermolysin, the type example for clan MA, occur in the motif HEXXH. The type example of this family is the pregnancy-associated plasma protein A (PAPP-A), which cleaves insulin-like growth factor (IGF) binding protein-4 (IGFBP-4), causing a dramatic reduction in its affinity for IGF-I and -II. Through this mechanism, PAPP-A is a regulator of IGF bioactivity in several systems, including the Homo sapiens ovary and the cardiovascular system [, , , ].; PDB: 3LUN_A 3LUM_B 2J83_A 2CKI_A.
Probab=20.79 E-value=18 Score=30.78 Aligned_cols=14 Identities=36% Similarity=0.814 Sum_probs=10.0
Q ss_pred ccccccccccCCcc
Q 016073 364 FMPHGLGHFLGIDT 377 (396)
Q Consensus 364 ~~~h~~GHgiGl~~ 377 (396)
-+.|.+||.+||.-
T Consensus 72 TltHEvGH~LGL~H 85 (154)
T PF05572_consen 72 TLTHEVGHWLGLYH 85 (154)
T ss_dssp HHHHHHHHHTT---
T ss_pred chhhhhhhhhcccc
Confidence 57899999999863
Done!