Query 016074
Match_columns 396
No_of_seqs 89 out of 115
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 07:26:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016074.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016074hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v97a5 d.133.1.1 (A:695-1332) 42.0 7.2 0.00053 37.2 3.3 28 149-176 579-611 (638)
2 d1rkba_ c.37.1.1 (A:) Adenylat 38.9 2.7 0.00019 30.8 -0.3 39 313-351 2-40 (173)
3 d1t3qb2 d.133.1.1 (B:166-786) 38.7 9.4 0.00068 35.8 3.5 35 145-181 583-618 (621)
4 d1ffvb2 d.133.1.1 (B:147-803) 27.6 22 0.0016 33.5 4.1 38 144-182 615-652 (657)
5 d1n62b2 d.133.1.1 (B:147-809) 26.0 23 0.0017 33.3 3.9 44 140-184 611-660 (663)
6 d1x6va3 c.37.1.4 (A:34-228) Ad 25.6 14 0.001 27.4 1.8 37 319-355 23-64 (195)
7 d1m8pa3 c.37.1.15 (A:391-573) 24.5 5 0.00036 29.1 -1.0 29 319-347 10-38 (183)
8 d2iyva1 c.37.1.2 (A:2-166) Shi 23.9 7 0.00051 29.6 -0.3 35 317-351 3-37 (165)
9 d2ia7a1 d.373.1.1 (A:23-133) U 22.5 22 0.0016 26.4 2.4 38 147-184 8-57 (111)
10 d1zaka1 c.37.1.1 (A:3-127,A:15 22.2 13 0.00098 28.4 1.1 34 319-352 7-40 (189)
11 d1rm6a2 d.133.1.1 (A:134-769) 21.9 20 0.0015 33.6 2.5 31 144-178 597-627 (636)
12 d1rz3a_ c.37.1.6 (A:) Hypothet 20.7 19 0.0014 26.5 1.7 47 290-342 2-49 (198)
No 1
>d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=42.00 E-value=7.2 Score=37.16 Aligned_cols=28 Identities=29% Similarity=0.413 Sum_probs=21.8
Q ss_pred HHhhhhhhhHHhhhcc----cccc-ccCcHHHH
Q 016074 149 ALSNAITNLAASVFGE----LWKL-EPLLEERK 176 (396)
Q Consensus 149 AiSNAITNL~AtvFGe----lwrL-EPl~~ekK 176 (396)
||.|||-|....-|.. .+.+ -|+.|||=
T Consensus 579 AI~nAi~~A~g~~~~~~~~~~~~~~lP~TPerV 611 (638)
T d1v97a5 579 AIKDAIRAARAQHTNNNTKELFRLDSPATPEKI 611 (638)
T ss_dssp HHHHHHHHHHHHHTCCCTTCCCCCCBSCCHHHH
T ss_pred HHHHHHHHhhhhhccccccccccCCCCCCHHHH
Confidence 8999999998888874 3444 49999973
No 2
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=38.85 E-value=2.7 Score=30.81 Aligned_cols=39 Identities=33% Similarity=0.491 Sum_probs=31.2
Q ss_pred CCCchhhhhhcCCCCCCchhHHHHHHhhccCCChhhhhh
Q 016074 313 MPVPTIIKDVLPKSGKTSLGEELYKVLTAESISSGEMIN 351 (396)
Q Consensus 313 MeIPe~y~esLPKnGrasLGD~iYr~iT~d~Fspe~lL~ 351 (396)
|-+|-..+--.|-+||++++..|-+.+.-..++.++++.
T Consensus 2 m~~~~I~i~G~pGsGKTTia~~La~~l~~~~i~~~~~~~ 40 (173)
T d1rkba_ 2 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 40 (173)
T ss_dssp CCCCCEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCcEEechHHHH
Confidence 667888888999999999999998877666666665553
No 3
>d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]}
Probab=38.66 E-value=9.4 Score=35.76 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=23.8
Q ss_pred hhHHHHhhhhhhhHHhhhc-cccccccCcHHHHhhhhh
Q 016074 145 TTALALSNAITNLAASVFG-ELWKLEPLLEERKSRWQR 181 (396)
Q Consensus 145 ~tALAiSNAITNL~AtvFG-elwrLEPl~~ekK~~WrR 181 (396)
++|=||.|||.|-... +| .+.+| |+.|||=-+.-+
T Consensus 583 ~~~~AI~nAi~~A~g~-~~~r~~~l-P~tpe~v~~al~ 618 (621)
T d1t3qb2 583 SAPAAVVAAVNDALAH-LEVVIETV-PITPERIFRSIQ 618 (621)
T ss_dssp HHHHHHHHHHHHHHGG-GTCCCCEE-SCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCC-cCCcccCC-CCCHHHHHHHHh
Confidence 4566999999987643 33 34444 999998655443
No 4
>d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=27.58 E-value=22 Score=33.46 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=26.1
Q ss_pred hhhHHHHhhhhhhhHHhhhccccccccCcHHHHhhhhhc
Q 016074 144 VTTALALSNAITNLAASVFGELWKLEPLLEERKSRWQRE 182 (396)
Q Consensus 144 V~tALAiSNAITNL~AtvFGelwrLEPl~~ekK~~WrRE 182 (396)
+++|=||.|||-|-... .|--.+=-|+.|||=-..-+|
T Consensus 615 ~~~~~Ai~nAI~~A~~~-tG~r~~~lP~Tpe~v~~al~~ 652 (657)
T d1ffvb2 615 VGSIPTFTAAVVDAFAH-VGVTHLDMPHTSYRVWKSLKE 652 (657)
T ss_dssp HHHHHHHHHHHHHHHGG-GTCCCCCSCCCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHh-hCCccCCCCCCHHHHHHHHHh
Confidence 34677899999987432 465444459999986655544
No 5
>d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=25.97 E-value=23 Score=33.30 Aligned_cols=44 Identities=20% Similarity=0.136 Sum_probs=33.7
Q ss_pred CCCch------hhHHHHhhhhhhhHHhhhccccccccCcHHHHhhhhhccc
Q 016074 140 GRLGV------TTALALSNAITNLAASVFGELWKLEPLLEERKSRWQREMD 184 (396)
Q Consensus 140 ~gKGV------~tALAiSNAITNL~AtvFGelwrLEPl~~ekK~~WrREmd 184 (396)
|.||| ++|=||.|||-|-.+ .+|--.+=-||.|||=-+.-+|+.
T Consensus 611 GakGvGE~~~~~~~~Ai~nAI~~A~~-~~G~r~~~lP~tpe~v~~~~~~~~ 660 (663)
T d1n62b2 611 GAKGVGESPHVGGVPCFSNAVNDAYA-FLNAGHIQMPHDAWRLWKVGEQLG 660 (663)
T ss_dssp SBCCCTTHHHHHHHHHHHHHHHHHHH-TTTCCCCCSCCCHHHHHHHHHHTT
T ss_pred CceecccccccchHHHHHHHHHHHHH-hcCCccccCCCCHHHHHHHHHHcC
Confidence 45665 478899999998764 578777777999999866667764
No 6
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.64 E-value=14 Score=27.43 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=26.7
Q ss_pred hhhhcCCCCCCchhHHHHHHh-----hccCCChhhhhhhcCC
Q 016074 319 IKDVLPKSGKTSLGEELYKVL-----TAESISSGEMINFLNL 355 (396)
Q Consensus 319 y~esLPKnGrasLGD~iYr~i-----T~d~Fspe~lL~~ldl 355 (396)
++--+|-+||++||..|-+.+ ..+.+..+++......
T Consensus 23 ~L~G~pGSGKTTiAk~La~~l~~~~~~~~~~~~d~~~~~~~~ 64 (195)
T d1x6va3 23 WLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNK 64 (195)
T ss_dssp EEESSCHHHHHHHHHHHHHHHHHTTCCEEEECHHHHTTTTTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHhcCCCccchhHHhhhccccc
Confidence 466799999999999998866 4455666665554333
No 7
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=24.48 E-value=5 Score=29.09 Aligned_cols=29 Identities=21% Similarity=0.140 Sum_probs=23.3
Q ss_pred hhhhcCCCCCCchhHHHHHHhhccCCChh
Q 016074 319 IKDVLPKSGKTSLGEELYKVLTAESISSG 347 (396)
Q Consensus 319 y~esLPKnGrasLGD~iYr~iT~d~Fspe 347 (396)
|+--+|=+||+++|..|-+.|....+...
T Consensus 10 ~l~G~~GsGKTTia~~La~~L~~~~~~~~ 38 (183)
T d1m8pa3 10 FLTGYMNSGKDAIARALQVTLNQQGGRSV 38 (183)
T ss_dssp EEECSTTSSHHHHHHHHHHHHHHHCSSCE
T ss_pred EEECCCCCCHHHHHHHHHHHHhhcCCCch
Confidence 45578999999999999999876665543
No 8
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.91 E-value=7 Score=29.61 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=28.0
Q ss_pred hhhhhhcCCCCCCchhHHHHHHhhccCCChhhhhh
Q 016074 317 TIIKDVLPKSGKTSLGEELYKVLTAESISSGEMIN 351 (396)
Q Consensus 317 e~y~esLPKnGrasLGD~iYr~iT~d~Fspe~lL~ 351 (396)
-..+--+|-+||+++|..|.+.+.-..++-+.++.
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D~~ie 37 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIE 37 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHHHHHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeeccchh
Confidence 33444689999999999999999888888777643
No 9
>d2ia7a1 d.373.1.1 (A:23-133) Uncharacterized protein GSU0986 {Geobacter sulfurreducens [TaxId: 35554]}
Probab=22.47 E-value=22 Score=26.43 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=33.1
Q ss_pred HHHHhhhhhhhHHhhhcc----------cccc--ccCcHHHHhhhhhccc
Q 016074 147 ALALSNAITNLAASVFGE----------LWKL--EPLLEERKSRWQREMD 184 (396)
Q Consensus 147 ALAiSNAITNL~AtvFGe----------lwrL--EPl~~ekK~~WrREmd 184 (396)
.=||-++|-||--|-+|| +|.| ||+.+..+...++++.
T Consensus 8 ee~I~q~i~nll~T~~GEr~~~p~fG~~l~~llFe~~~~~~~~~i~~~I~ 57 (111)
T d2ia7a1 8 EEDIAESIRIILGTARGERVMRPDFGCGIHDRVFSVINTTTLGLIENEVK 57 (111)
T ss_dssp HHHHHHHHHHHHTCCTTSSTTCTTCSCGGGGCCCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCccccCCccccEechhhhhhcchhHHHHHHHHHH
Confidence 447889999999999999 8888 9999999999988873
No 10
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=22.15 E-value=13 Score=28.36 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=29.2
Q ss_pred hhhhcCCCCCCchhHHHHHHhhccCCChhhhhhh
Q 016074 319 IKDVLPKSGKTSLGEELYKVLTAESISSGEMINF 352 (396)
Q Consensus 319 y~esLPKnGrasLGD~iYr~iT~d~Fspe~lL~~ 352 (396)
++.--|-+||++++..|-+.+-..+++.++++..
T Consensus 7 ~i~GppGsGKsT~a~~La~~~~~~~is~~~~~~~ 40 (189)
T d1zaka1 7 MISGAPASGKGTQCELIKTKYQLAHISAGDLLRA 40 (189)
T ss_dssp EEEESTTSSHHHHHHHHHHHHCCEECCHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHCCcEEehhHHHHH
Confidence 4456799999999999999999999999888763
No 11
>d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]}
Probab=21.94 E-value=20 Score=33.63 Aligned_cols=31 Identities=19% Similarity=0.109 Sum_probs=22.4
Q ss_pred hhhHHHHhhhhhhhHHhhhccccccccCcHHHHhh
Q 016074 144 VTTALALSNAITNLAASVFGELWKLEPLLEERKSR 178 (396)
Q Consensus 144 V~tALAiSNAITNL~AtvFGelwrLEPl~~ekK~~ 178 (396)
+++|-||.|||-|.. |.-.+==|+.|||=-.
T Consensus 597 ~~~~~Ai~nAI~~A~----G~r~~~lP~tpe~v~~ 627 (636)
T d1rm6a2 597 AGFLPAIHEAVYEAV----GVRATDFPLSPDRITE 627 (636)
T ss_dssp TTHHHHHHHHHHHHH----SCCCCEESCCHHHHHH
T ss_pred ccHHHHHHHHHHHhH----CCCcCcCCCCHHHHHH
Confidence 357889999998863 6544444999998543
No 12
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.75 E-value=19 Score=26.51 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=36.4
Q ss_pred hhhhHHHHHHHHHHhhhhhhhccCCCchhh-hhhcCCCCCCchhHHHHHHhhcc
Q 016074 290 SQCRVVYQVFKAAKSINENVLLEMPVPTII-KDVLPKSGKTSLGEELYKVLTAE 342 (396)
Q Consensus 290 ~qrd~~nQIlKAAmAINs~vL~EMeIPe~y-~esLPKnGrasLGD~iYr~iT~d 342 (396)
+.||-+-++.|++++|+..- |-.+ +.-.|-+||++|-..|...+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~------~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 2 ELRDRIDFLCKTILAIKTAG------RLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp CHHHHHHHHHHHHHTSCCSS------SEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhccCCC------CEEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 35788899999999987651 3333 78889999999999998876543
Done!